CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 SMART SM00354 1 73 7.4E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 2 50 4.9E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 TIGRFAM TIGR02417 fruct_sucro_rep: D-fructose-responsive transcription factor 2 328 1.6E-154 T 28-03-2018 IPR012781 D-fructose-responsive transcription factor GO:0003677|GO:0006355|GO:0009750 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 SUPERFAMILY SSF47413 2 58 8.7E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 SUPERFAMILY SSF53822 60 314 8.64E-42 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 Gene3D G3DSA:1.10.260.40 1 56 7.6E-20 T 28-03-2018 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 Gene3D G3DSA:3.40.50.2300 57 165 9.4E-26 T 28-03-2018 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 Gene3D G3DSA:3.40.50.2300 166 332 2.7E-19 T 28-03-2018 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 ProSitePatterns PS00356 LacI-type HTH domain signature. 3 21 - T 28-03-2018 CI104_RS04850 39e16142fc67dbf18e1f012519c302ae 334 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 312 3.5E-14 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 Pfam PF02798 Glutathione S-transferase, N-terminal domain 54 127 1.5E-5 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 Pfam PF13410 Glutathione S-transferase, C-terminal domain 174 244 4.0E-9 T 28-03-2018 CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 Gene3D G3DSA:1.20.1050.10 146 288 9.4E-28 T 28-03-2018 CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 SUPERFAMILY SSF47616 181 259 3.76E-32 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 SUPERFAMILY SSF47616 117 152 3.76E-32 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 Gene3D G3DSA:3.40.30.10 45 145 3.3E-23 T 28-03-2018 CI104_RS04060 bc9005df9bc17395d80efc73f3219eed 288 SUPERFAMILY SSF52833 37 130 6.2E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS23840 ce0016561430af7ddc8ed99cfcd22d36 316 Gene3D G3DSA:3.40.50.300 9 316 1.3E-55 T 28-03-2018 CI104_RS23840 ce0016561430af7ddc8ed99cfcd22d36 316 PIRSF PIRSF000545 1 316 1.3E-149 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CI104_RS23840 ce0016561430af7ddc8ed99cfcd22d36 316 TIGRFAM TIGR00554 panK_bact: pantothenate kinase 10 316 1.4E-180 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CI104_RS23840 ce0016561430af7ddc8ed99cfcd22d36 316 Hamap MF_00215 Pantothenate kinase [coaA]. 1 316 190.44 T 28-03-2018 IPR004566 Pantothenate kinase GO:0004594|GO:0005524|GO:0005737|GO:0015937 KEGG: 00770+2.7.1.33|MetaCyc: PWY-3961 CI104_RS23840 ce0016561430af7ddc8ed99cfcd22d36 316 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 90 245 3.9E-14 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CI104_RS23840 ce0016561430af7ddc8ed99cfcd22d36 316 SUPERFAMILY SSF52540 10 316 5.61E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 45 61 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 251 269 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 85 95 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 23 39 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 64 82 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 274 287 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 324 339 1.1E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 Pfam PF13458 Periplasmic binding protein 23 341 2.2E-55 T 28-03-2018 IPR028081 Leucine-binding protein domain CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 Gene3D G3DSA:3.40.50.2300 170 345 2.8E-20 T 28-03-2018 CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 SUPERFAMILY SSF53822 22 355 6.06E-88 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS01425 8392f47f65c99ac9a6203580c07c7465 364 Gene3D G3DSA:3.40.50.2300 19 169 2.1E-37 T 28-03-2018 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 SUPERFAMILY SSF63380 1 93 7.4E-27 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 PIRSF PIRSF000498 1 213 2.0E-76 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 SUPERFAMILY SSF63380 94 200 8.08E-32 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 TIGRFAM TIGR00187 ribE: riboflavin synthase, alpha subunit 1 202 1.1E-87 T 28-03-2018 IPR001783 Lumazine-binding protein KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 Pfam PF00677 Lumazine binding domain 100 185 1.3E-22 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 Pfam PF00677 Lumazine binding domain 3 87 1.3E-23 T 28-03-2018 IPR026017 Lumazine-binding domain KEGG: 00740+2.5.1.9|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 Gene3D G3DSA:2.40.30.20 1 89 5.0E-28 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS12335 9012e3cf86e3d423a1d25d335fd0ff1d 213 Gene3D G3DSA:2.40.30.20 94 192 2.8E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 ProSitePatterns PS00122 Carboxylesterases type-B serine active site. 182 197 - T 28-03-2018 IPR019826 Carboxylesterase type B, active site CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 ProSitePatterns PS00941 Carboxylesterases type-B signature 2. 84 94 - T 28-03-2018 IPR019819 Carboxylesterase type B, conserved site CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 Pfam PF00135 Carboxylesterase family 8 328 1.9E-86 T 28-03-2018 IPR002018 Carboxylesterase, type B CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 Pfam PF00135 Carboxylesterase family 353 474 1.2E-12 T 28-03-2018 IPR002018 Carboxylesterase, type B CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 PRINTS PR00878 Cholinesterase signature 108 137 3.0E-6 T 28-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 PRINTS PR00878 Cholinesterase signature 400 412 3.0E-6 T 28-03-2018 IPR000997 Cholinesterase GO:0004104 Reactome: R-HSA-112311|Reactome: R-HSA-1483191|Reactome: R-HSA-422085 CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 SUPERFAMILY SSF53474 10 497 6.04E-113 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS13540 6d3c5870ad5b25160239bf32e280f640 502 Gene3D G3DSA:3.40.50.1820 6 501 2.6E-116 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 TIGRFAM TIGR04365 spare_glycyl: autonomous glycyl radical cofactor GrcA 2 127 2.6E-70 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 Hamap MF_00806 Autonomous glycyl radical cofactor [grcA]. 1 127 43.408 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 ProSitePatterns PS00850 Glycine radical domain signature. 97 105 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 SUPERFAMILY SSF51998 64 126 3.07E-24 T 28-03-2018 CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 PIRSF PIRSF000378 2 127 4.7E-56 T 28-03-2018 IPR011140 Autonomous glycyl radical cofactor GrcA CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 Pfam PF01228 Glycine radical 16 108 1.2E-22 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CI104_RS18870 98b7e81bba51cc0f8b53f5e86924a9b9 127 Gene3D G3DSA:3.20.70.20 58 127 6.0E-30 T 28-03-2018 CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 SMART SM00382 322 503 6.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 SMART SM00382 29 199 1.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 SUPERFAMILY SSF52540 292 503 1.5E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 Pfam PF00005 ABC transporter 319 443 8.1E-16 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 Pfam PF00005 ABC transporter 21 153 2.1E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 Gene3D G3DSA:3.40.50.300 1 288 8.4E-43 T 28-03-2018 CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 Gene3D G3DSA:3.40.50.300 297 569 1.8E-33 T 28-03-2018 CI104_RS13120 6609043d827eb7328fb434ffff2c3437 571 SUPERFAMILY SSF52540 4 203 6.59E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 SUPERFAMILY SSF52540 272 511 1.31E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Gene3D G3DSA:3.30.450.20 165 258 8.1E-9 T 28-03-2018 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Gene3D G3DSA:3.30.450.40 5 164 4.9E-5 T 28-03-2018 IPR029016 GAF domain-like CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Pfam PF00158 Sigma-54 interaction domain 272 439 1.4E-68 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Gene3D G3DSA:1.10.8.60 446 551 2.4E-21 T 28-03-2018 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 SMART SM00091 160 225 2.2E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 160 207 3.2E-6 T 28-03-2018 IPR000014 PAS domain CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 296 309 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Gene3D G3DSA:3.40.50.300 268 445 1.9E-26 T 28-03-2018 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Gene3D G3DSA:1.10.10.60 552 588 5.3E-15 T 28-03-2018 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 SUPERFAMILY SSF55785 162 221 1.1E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 SMART SM00382 292 436 6.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 486 495 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Pfam PF02954 Bacterial regulatory protein, Fis family 547 586 4.8E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 Pfam PF00989 PAS fold 162 205 2.6E-7 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS20900 4b43f64907fee15ea6d362b7195902bc 591 SUPERFAMILY SSF46689 538 588 3.59E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 SMART SM00420 11 63 1.7E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 3.4E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 3.4E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 Pfam PF00455 DeoR C terminal sensor domain 79 235 7.1E-42 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 SMART SM01134 76 237 8.0E-58 T 28-03-2018 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 SUPERFAMILY SSF46785 9 65 1.23E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 Pfam PF08220 DeoR-like helix-turn-helix domain 11 63 2.8E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 SUPERFAMILY SSF100950 80 238 2.34E-22 T 28-03-2018 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 Gene3D G3DSA:3.40.50.1360 68 244 7.0E-32 T 28-03-2018 CI104_RS13850 02e1eea3779606ba15576bd7ba75d7eb 256 Gene3D G3DSA:1.10.10.10 6 63 4.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 709 735 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 577 606 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 245 260 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 386 406 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 535 555 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 133 146 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 PRINTS PR00150 Phosphoenolpyruvate carboxylase signature 186 202 1.7E-68 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 SUPERFAMILY SSF51621 6 883 0.0 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 ProSitePatterns PS00393 Phosphoenolpyruvate carboxylase active site 2. 537 549 - T 28-03-2018 IPR033129 Phosphoenolpyruvate carboxylase, His active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 Gene3D G3DSA:1.20.1440.90 274 388 1.2E-25 T 28-03-2018 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 ProSitePatterns PS00781 Phosphoenolpyruvate carboxylase active site 1. 134 145 - T 28-03-2018 IPR018129 Phosphoenolpyruvate carboxylase, Lys active site KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 Hamap MF_00595 Phosphoenolpyruvate carboxylase [ppc]. 1 883 18.417 T 28-03-2018 IPR022805 Phosphoenolpyruvate carboxylase, bacterial/plant-type GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS23975 b9c831d84cafc17fbc4d1d56c7baffce 883 Pfam PF00311 Phosphoenolpyruvate carboxylase 129 883 3.2E-295 T 28-03-2018 IPR021135 Phosphoenolpyruvate carboxylase GO:0006099|GO:0008964|GO:0015977 KEGG: 00620+4.1.1.31|KEGG: 00680+4.1.1.31|KEGG: 00710+4.1.1.31|KEGG: 00720+4.1.1.31|MetaCyc: PWY-1622|MetaCyc: PWY-241|MetaCyc: PWY-5913|MetaCyc: PWY-6142|MetaCyc: PWY-6146|MetaCyc: PWY-6549|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7124 CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 SUPERFAMILY SSF53383 4 360 1.76E-111 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 TIGRFAM TIGR01364 serC_1: phosphoserine transaminase 4 360 1.9E-152 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 Gene3D G3DSA:3.40.640.10 16 259 8.4E-22 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 Hamap MF_00160 Phosphoserine aminotransferase [serC]. 2 361 50.742 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 189 208 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 PIRSF PIRSF000525 1 362 1.2E-147 T 28-03-2018 IPR022278 Phosphoserine aminotransferase GO:0004648|GO:0006564 KEGG: 00260+2.6.1.52|KEGG: 00680+2.6.1.52|KEGG: 00750+2.6.1.52|Reactome: R-HSA-977347 CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 Pfam PF00266 Aminotransferase class-V 4 350 1.2E-70 T 28-03-2018 IPR000192 Aminotransferase class V domain CI104_RS09025 3e5e86155d897bf93a74f73a083d46f4 362 Gene3D G3DSA:3.90.1150.10 260 360 4.1E-37 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS06115 a8367af5c3f45fce0bfc5325747e6f9f 302 Pfam PF00480 ROK family 3 301 5.7E-93 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS06115 a8367af5c3f45fce0bfc5325747e6f9f 302 Gene3D G3DSA:3.30.420.40 116 302 2.1E-49 T 28-03-2018 CI104_RS06115 a8367af5c3f45fce0bfc5325747e6f9f 302 SUPERFAMILY SSF53067 3 300 1.87E-60 T 28-03-2018 CI104_RS06115 a8367af5c3f45fce0bfc5325747e6f9f 302 Gene3D G3DSA:3.30.420.40 1 115 2.0E-24 T 28-03-2018 CI104_RS06115 a8367af5c3f45fce0bfc5325747e6f9f 302 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS12130 9bf420fd547571fac98f8b97aea943d5 122 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 103 120 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CI104_RS12130 9bf420fd547571fac98f8b97aea943d5 122 SUPERFAMILY SSF89360 18 111 4.12E-27 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS12130 9bf420fd547571fac98f8b97aea943d5 122 TIGRFAM TIGR01997 sufA_proteo: FeS assembly scaffold SufA 17 122 1.4E-48 T 28-03-2018 IPR011298 FeS assembly scaffold SufA GO:0097428 CI104_RS12130 9bf420fd547571fac98f8b97aea943d5 122 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 18 121 5.7E-33 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CI104_RS12130 9bf420fd547571fac98f8b97aea943d5 122 Pfam PF01521 Iron-sulphur cluster biosynthesis 18 118 7.4E-20 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS12130 9bf420fd547571fac98f8b97aea943d5 122 Gene3D G3DSA:2.60.300.12 18 122 1.0E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 Pfam PF12146 Serine aminopeptidase, S33 28 261 4.6E-24 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.3E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 52 67 1.3E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00111 Alpha/beta hydrolase fold signature 221 235 1.3E-10 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00412 Epoxide hydrolase signature 32 50 6.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00412 Epoxide hydrolase signature 52 67 6.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00412 Epoxide hydrolase signature 253 275 6.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 PRINTS PR00412 Epoxide hydrolase signature 219 235 6.5E-7 T 28-03-2018 IPR000639 Epoxide hydrolase-like GO:0003824 CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 Gene3D G3DSA:3.40.50.1820 4 278 2.8E-59 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS07405 a95d8c45dabb114a754aa9836cdfe41a 278 SUPERFAMILY SSF53474 7 277 1.55E-62 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 SMART SM01192 143 430 1.3E-214 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 ProSitePatterns PS00164 Enolase signature. 339 352 - T 28-03-2018 IPR020809 Enolase, conserved site KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PIRSF PIRSF001400 1 430 2.4E-192 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 SUPERFAMILY SSF54826 3 138 2.5E-56 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 TIGRFAM TIGR01060 eno: phosphopyruvate hydratase 4 428 9.8E-206 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 Pfam PF03952 Enolase, N-terminal domain 4 134 8.0E-58 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 Pfam PF00113 Enolase, C-terminal TIM barrel domain 144 429 5.3E-142 T 28-03-2018 IPR020810 Enolase, C-terminal TIM barrel domain KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PRINTS PR00148 Enolase signature 107 123 3.9E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PRINTS PR00148 Enolase signature 37 51 3.9E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PRINTS PR00148 Enolase signature 165 178 3.9E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PRINTS PR00148 Enolase signature 368 385 3.9E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PRINTS PR00148 Enolase signature 316 327 3.9E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 PRINTS PR00148 Enolase signature 339 353 3.9E-44 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 Gene3D G3DSA:3.20.20.120 128 430 3.8E-105 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 Gene3D G3DSA:3.30.390.10 3 127 9.0E-51 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 SMART SM01193 4 134 6.0E-93 T 28-03-2018 IPR020811 Enolase, N-terminal KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 SUPERFAMILY SSF51604 143 427 4.95E-128 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20035 066135936bc56a798048e98a0b1da9d6 431 Hamap MF_00318 Enolase [eno]. 2 416 44.246 T 28-03-2018 IPR000941 Enolase GO:0000015|GO:0000287|GO:0004634|GO:0006096 KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 SUPERFAMILY SSF52540 141 391 7.38E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 SUPERFAMILY SSF140990 402 602 6.28E-73 T 28-03-2018 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 Hamap MF_01458 ATP-dependent zinc metalloprotease FtsH [ftsH]. 3 615 37.479 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 188 320 6.4E-46 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 Gene3D G3DSA:3.40.50.300 128 331 4.2E-63 T 28-03-2018 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 Pfam PF06480 FtsH Extracellular 5 93 4.7E-17 T 28-03-2018 IPR011546 Peptidase M41, FtsH extracellular GO:0004222|GO:0005524|GO:0008270|GO:0016021 Reactome: R-HSA-8949664 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 Pfam PF01434 Peptidase family M41 382 591 1.1E-82 T 28-03-2018 IPR000642 Peptidase M41 GO:0004222|GO:0005524|GO:0006508 Reactome: R-HSA-8949664 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 ProSitePatterns PS00674 AAA-protein family signature. 291 309 - T 28-03-2018 IPR003960 ATPase, AAA-type, conserved site GO:0005524 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 Gene3D G3DSA:1.10.8.60 332 411 3.2E-25 T 28-03-2018 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 TIGRFAM TIGR01241 FtsH_fam: ATP-dependent metallopeptidase HflB 100 593 5.6E-248 T 28-03-2018 IPR005936 Peptidase, FtsH GO:0004222|GO:0016020 Reactome: R-HSA-8949664 CI104_RS02815 d9dc86738b27271303d66219bed75bb9 643 SMART SM00382 184 323 1.9E-26 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF46894 132 234 2.07E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00072 Response regulator receiver domain 7 117 1.3E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 232 2.2E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:1.10.10.10 126 239 7.0E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00448 5 116 8.6E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 Gene3D G3DSA:3.40.50.2300 2 125 2.0E-38 T 28-03-2018 CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 SUPERFAMILY SSF52172 3 126 8.4E-42 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS01720 d8521a76d5088ea0467c0daab9e28465 239 SMART SM00862 156 232 1.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 18 134 9.0E-26 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 PIRSF PIRSF009393 1 755 2.0E-272 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 615 743 6.3E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 381 395 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 140 590 3.2E-191 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 Gene3D G3DSA:3.90.1150.10 447 639 5.3E-55 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 SUPERFAMILY SSF55904 610 754 2.75E-36 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 SUPERFAMILY SSF53383 140 607 2.59E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 Gene3D G3DSA:3.40.640.10 140 444 3.2E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS22995 1a573ee55a3d136c21f7351f25e1cc28 755 Gene3D G3DSA:3.90.100.10 640 755 9.5E-29 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS18995 df93321a48c7892b0a928db333ae0649 407 SMART SM00267 237 407 1.6E-52 T 28-03-2018 IPR000160 GGDEF domain CI104_RS18995 df93321a48c7892b0a928db333ae0649 407 SUPERFAMILY SSF55073 253 403 2.43E-35 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS18995 df93321a48c7892b0a928db333ae0649 407 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 246 404 4.2E-33 T 28-03-2018 IPR000160 GGDEF domain CI104_RS18995 df93321a48c7892b0a928db333ae0649 407 Gene3D G3DSA:3.30.70.270 242 406 7.8E-46 T 28-03-2018 CI104_RS18995 df93321a48c7892b0a928db333ae0649 407 Pfam PF00990 Diguanylate cyclase, GGDEF domain 248 403 8.5E-41 T 28-03-2018 IPR000160 GGDEF domain CI104_RS18995 df93321a48c7892b0a928db333ae0649 407 Pfam PF17152 Periplasmic sensor domain 44 144 9.9E-29 T 28-03-2018 IPR033417 Periplasmic sensor domain CHASE8 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 Gene3D G3DSA:3.40.50.2000 6 479 9.0E-197 T 28-03-2018 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 SUPERFAMILY SSF53756 8 814 0.0 T 28-03-2018 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 654 666 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 Pfam PF00343 Carbohydrate phosphorylase 102 810 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 14 810 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 PIRSF PIRSF000460 1 815 3.2E-234 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01565 82861e6c3348e187ff165720ebca1417 815 Gene3D G3DSA:3.40.50.2000 480 795 6.3E-145 T 28-03-2018 CI104_RS17975 95346d1dede6fa8c705282fe020704f2 321 Pfam PF02685 Glucokinase 6 315 1.7E-123 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CI104_RS17975 95346d1dede6fa8c705282fe020704f2 321 Hamap MF_00524 Glucokinase [glk]. 4 316 35.91 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CI104_RS17975 95346d1dede6fa8c705282fe020704f2 321 Gene3D G3DSA:3.30.420.40 1 108 2.5E-15 T 28-03-2018 CI104_RS17975 95346d1dede6fa8c705282fe020704f2 321 Gene3D G3DSA:3.40.367.20 109 299 4.7E-29 T 28-03-2018 CI104_RS17975 95346d1dede6fa8c705282fe020704f2 321 TIGRFAM TIGR00749 glk: glucokinase 6 310 1.1E-151 T 28-03-2018 IPR003836 Glucokinase GO:0004340|GO:0005524|GO:0006096|GO:0051156 KEGG: 00010+2.7.1.2|KEGG: 00052+2.7.1.2|KEGG: 00500+2.7.1.2|KEGG: 00520+2.7.1.2|KEGG: 00521+2.7.1.2|KEGG: 00524+2.7.1.2|MetaCyc: PWY-2722|MetaCyc: PWY-2723|MetaCyc: PWY-5514|MetaCyc: PWY-5661|MetaCyc: PWY-621|MetaCyc: PWY-7238|MetaCyc: PWY-7385 CI104_RS17975 95346d1dede6fa8c705282fe020704f2 321 SUPERFAMILY SSF53067 4 318 2.13E-64 T 28-03-2018 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 SUPERFAMILY SSF52172 1 108 6.97E-28 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 Gene3D G3DSA:3.40.50.180 149 349 2.6E-80 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 Hamap MF_00099 Chemotaxis response regulator protein-glutamate methylesterase [cheB]. 4 342 41.41 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 Gene3D G3DSA:3.40.50.2300 1 148 3.4E-27 T 28-03-2018 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 SMART SM00448 4 119 1.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 Pfam PF01339 CheB methylesterase 159 336 4.8E-63 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 SUPERFAMILY SSF52738 156 342 3.14E-75 T 28-03-2018 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 Pfam PF00072 Response regulator receiver domain 6 109 8.4E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS15485 bd6cf014be74a6bbe198d5c1d85c0dac 349 PIRSF PIRSF000876 1 346 1.3E-138 T 28-03-2018 IPR008248 Signal transduction response regulator, chemotaxis, CheB GO:0000156|GO:0000160|GO:0005737|GO:0006935|GO:0008984 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 Pfam PF03502 Nucleoside-specific channel-forming protein, Tsx 32 294 5.4E-81 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 Gene3D G3DSA:2.40.230.20 26 294 1.7E-78 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 89 110 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 150 175 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 55 79 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 182 205 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 270 293 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 115 135 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 240 259 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 PRINTS PR01277 Nucleoside-specific channel-forming protein Tsx signature 28 50 6.4E-114 T 28-03-2018 IPR003055 Nucleoside-specific channel-forming protein, Tsx GO:0005337|GO:0009279 CI104_RS06255 061275d9c1dd553c65c3a2b4ee865dbb 294 SUPERFAMILY SSF111364 32 294 1.28E-88 T 28-03-2018 IPR018013 Nucleoside-specific channel-forming protein, Tsx-like GO:0009279 CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 SUPERFAMILY SSF51735 6 251 8.24E-72 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 Gene3D G3DSA:3.40.50.720 44 253 2.1E-53 T 28-03-2018 CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 Gene3D G3DSA:3.40.50.720 2 43 5.8E-6 T 28-03-2018 CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 251 2.3E-56 T 28-03-2018 CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 7.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 5.6E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 5.6E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 5.6E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.6E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 5.6E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20765 9130d8871f1a531ad4b85ef4c8aa465c 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 5.6E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Gene3D G3DSA:1.20.1640.10 825 1032 3.5E-37 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Gene3D G3DSA:3.30.70.1430 568 669 4.0E-22 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Gene3D G3DSA:3.30.2090.10 180 275 1.2E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82714 724 810 1.96E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1035 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82714 182 271 2.49E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Gene3D G3DSA:3.30.2090.10 723 811 2.1E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Gene3D G3DSA:1.20.1640.10 287 510 3.2E-44 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82866 808 1033 6.02E-44 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82866 296 497 7.32E-48 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Gene3D G3DSA:3.30.70.1430 38 140 4.3E-30 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 2.2E-116 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82693 38 132 6.8E-28 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82693 566 670 2.12E-34 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1029 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82693 136 182 2.17E-26 T 28-03-2018 CI104_RS02320 ba156ad29363231094c0e187ddbd852e 1037 SUPERFAMILY SSF82693 274 330 2.17E-26 T 28-03-2018 CI104_RS19295 1ed06dbf15504910224d95929eaba5b0 650 Gene3D G3DSA:3.40.50.300 8 348 1.5E-14 T 28-03-2018 CI104_RS19295 1ed06dbf15504910224d95929eaba5b0 650 SUPERFAMILY SSF52540 8 119 6.46E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19295 1ed06dbf15504910224d95929eaba5b0 650 SUPERFAMILY SSF52540 287 414 6.46E-20 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19295 1ed06dbf15504910224d95929eaba5b0 650 Pfam PF13175 AAA ATPase domain 360 404 1.2E-9 T 28-03-2018 CI104_RS19295 1ed06dbf15504910224d95929eaba5b0 650 Gene3D G3DSA:3.40.50.300 356 440 3.5E-9 T 28-03-2018 CI104_RS03445 205c9be5fcf2c1a906205a5e291cdd34 113 Pfam PF17282 Family of unknown function (DUF5347) 10 111 1.2E-39 T 28-03-2018 IPR035232 Protein of unknown function DUF5347 CI104_RS03445 205c9be5fcf2c1a906205a5e291cdd34 113 ProDom PD073252 TRANSPOSABLE STY4640 FELS-2 RETRON ORFC C0938 ELEMENT STY3664 EC67 PHAGE-RELATED 1 111 3.0E-55 T 28-03-2018 IPR035232 Protein of unknown function DUF5347 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 SUPERFAMILY SSF82829 228 312 3.14E-27 T 28-03-2018 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 SUPERFAMILY SSF52402 5 227 5.07E-64 T 28-03-2018 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 TIGRFAM TIGR02432 lysidine_TilS_N: tRNA(Ile)-lysidine synthetase 15 197 5.2E-54 T 28-03-2018 IPR012795 tRNA(Ile)-lysidine synthase, N-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 Gene3D G3DSA:3.40.50.620 9 221 1.5E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 Pfam PF09179 TilS substrate binding domain 243 309 1.7E-20 T 28-03-2018 IPR015262 tRNA(Ile)-lysidine synthase , substrate-binding domain GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 Pfam PF01171 PP-loop family 15 192 1.5E-60 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 TIGRFAM TIGR02433 lysidine_TilS_C: tRNA(Ile)-lysidine synthetase, C-terminal domain 357 402 5.3E-16 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 Pfam PF11734 TilS substrate C-terminal domain 357 428 2.9E-26 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 Hamap MF_01161 tRNA(Ile)-lysidine synthase [tilS]. 6 301 23.671 T 28-03-2018 IPR012094 tRNA(Ile)-lysidine synthase GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 SMART SM00977 357 428 1.6E-25 T 28-03-2018 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal GO:0000166|GO:0005524|GO:0005737|GO:0008033|GO:0016879 CI104_RS05390 723cfc01f566e558fc4480c4d7c54cb6 432 SUPERFAMILY SSF56037 320 427 4.45E-31 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 1 187 7.1E-93 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 Pfam PF00117 Glutamine amidotransferase class-I 3 185 1.3E-55 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS01895 150e16cec1898a867c909e48663172a4 187 Gene3D G3DSA:3.40.50.880 1 187 5.8E-57 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 44 58 7.2E-6 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 74 90 7.2E-6 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 74 85 6.9E-14 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 47 56 6.9E-14 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00096 Glutamine amidotransferase superfamily signature 164 177 6.9E-14 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 SUPERFAMILY SSF52317 1 186 1.05E-55 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00097 Anthranilate synthase component II signature 47 56 7.7E-37 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00097 Anthranilate synthase component II signature 164 177 7.7E-37 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00097 Anthranilate synthase component II signature 2 16 7.7E-37 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00097 Anthranilate synthase component II signature 74 85 7.7E-37 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00097 Anthranilate synthase component II signature 99 107 7.7E-37 T 28-03-2018 CI104_RS01895 150e16cec1898a867c909e48663172a4 187 PRINTS PR00097 Anthranilate synthase component II signature 119 131 7.7E-37 T 28-03-2018 CI104_RS12530 1e9fda555b72a3e42c722731be595a10 71 SUPERFAMILY SSF68989 1 71 1.96E-22 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS12530 1e9fda555b72a3e42c722731be595a10 71 Pfam PF05321 Haemolysin expression modulating protein 8 68 1.5E-27 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS12530 1e9fda555b72a3e42c722731be595a10 71 Gene3D G3DSA:1.20.1280.40 1 70 2.5E-28 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS07140 4455d286881d57d881acc9d03e5cb2d1 415 Pfam PF00924 Mechanosensitive ion channel 143 397 3.1E-66 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CI104_RS07140 4455d286881d57d881acc9d03e5cb2d1 415 Gene3D G3DSA:2.30.30.60 202 252 9.4E-10 T 28-03-2018 CI104_RS07140 4455d286881d57d881acc9d03e5cb2d1 415 SUPERFAMILY SSF82689 322 397 1.03E-5 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CI104_RS07140 4455d286881d57d881acc9d03e5cb2d1 415 SUPERFAMILY SSF50182 187 253 4.58E-12 T 28-03-2018 IPR010920 LSM domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 2201 2300 1.33E-12 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 999 1086 6.28E-22 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 3090 3180 5.69E-7 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 2967 3051 5.76E-6 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1083 1183 1.53E-20 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1992 2093 9.42E-15 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2154 2258 4.6E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2756 2876 1.8E-5 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1041 1140 2.1E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1637 1740 3.5E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1947 2048 8.2E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2877 3004 8.0E-7 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 386 535 5.9E-10 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1339 1437 5.9E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 745 843 2.2E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 3133 3255 2.8E-10 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2366 2494 0.0017 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2259 2365 1.7E-7 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 3005 3132 6.7E-8 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 844 942 4.1E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1240 1338 7.9E-19 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2495 2628 5.1E-4 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 646 744 2.2E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1438 1533 1.9E-18 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 943 1040 1.6E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 536 645 1.1E-15 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1141 1239 6.7E-20 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2049 2153 2.5E-14 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1843 1946 3.2E-17 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1741 1842 1.4E-13 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 1534 1636 4.3E-14 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Gene3D G3DSA:2.60.120.260 2630 2755 2.5E-6 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 504 592 3.4E-10 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1380 1480 3.34E-20 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 599 690 3.14E-21 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1999 2095 2.2E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 796 884 2.4E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1693 1783 9.1E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1587 1683 3.3E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1486 1577 1.9E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 598 686 1.9E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 994 1082 4.7E-15 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1390 1478 4.0E-14 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 895 983 5.6E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1192 1280 9.7E-15 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1793 1889 2.9E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 3217 3308 0.095 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1093 1181 5.4E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 2208 2302 9.1E-6 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 2104 2199 1.7E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 3089 3180 0.1 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 697 785 1.6E-16 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1291 1379 1.5E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SMART SM00634 1899 1989 2.8E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1891 1984 1.88E-18 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 PRINTS PR01369 Intimin signature 257 276 1.1E-15 T 28-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 PRINTS PR01369 Intimin signature 229 244 1.1E-15 T 28-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 PRINTS PR01369 Intimin signature 325 344 1.1E-15 T 28-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 PRINTS PR01369 Intimin signature 412 424 1.1E-15 T 28-03-2018 IPR003535 Intimin/invasin bacterial adhesion mediator protein GO:0007155 CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1281 1381 7.46E-21 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1397 1477 3.3E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 803 885 3.1E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 902 981 5.2E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1001 1083 4.5E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1486 1569 3.8E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1199 1277 9.0E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 704 785 3.6E-14 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 2004 2092 1.5E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1100 1179 3.7E-12 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1694 1772 9.8E-10 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1900 1979 3.2E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 2112 2200 1.4E-7 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 605 684 5.5E-11 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1300 1378 4.6E-13 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1594 1680 2.4E-8 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF02369 Bacterial Ig-like domain (group 1) 1801 1886 9.9E-9 T 28-03-2018 IPR003344 Big-1 (bacterial Ig-like domain 1) domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1182 1282 4.71E-22 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 801 888 4.32E-20 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF09134 Invasin, domain 3 507 595 1.9E-14 T 28-03-2018 IPR015217 Invasin, domain 3 CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1786 1887 1.06E-14 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1685 1779 8.83E-17 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 Pfam PF11924 Inverse autotransporter, beta-domain 105 377 1.2E-105 T 28-03-2018 IPR024519 Inverse autotransporter, beta-domain CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 885 985 1.39E-21 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 3218 3308 1.02E-6 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1580 1681 8.44E-14 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 702 789 1.24E-22 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 1479 1574 1.33E-16 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS04095 e9701b416f3709cd126e833263890c3c 3488 SUPERFAMILY SSF49373 2097 2201 1.31E-13 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 Gene3D G3DSA:1.10.10.10 44 207 4.7E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 182 5.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 194 5.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 166 5.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 Pfam PF00196 Bacterial regulatory proteins, luxR family 151 205 4.6E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 SUPERFAMILY SSF46894 145 206 9.18E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS21280 5cf7b5d0e79274a8889b495b651f5a08 210 SMART SM00421 149 206 3.8E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 TIGRFAM TIGR01797 CM_P_1: chorismate mutase 7 89 1.8E-41 T 28-03-2018 IPR010952 Chorismate mutase, gammaproteobacteria GO:0004106|GO:0005737|GO:0009094 KEGG: 00400+5.4.99.5+4.2.1.51|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7432|MetaCyc: PWY-7626 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 SUPERFAMILY SSF53850 105 291 2.71E-53 T 28-03-2018 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 ProSitePatterns PS00858 Prephenate dehydratase signature 2. 325 332 - T 28-03-2018 IPR018528 Prephenate dehydratase, conserved site GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 Gene3D G3DSA:3.30.70.260 288 383 4.9E-25 T 28-03-2018 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 Pfam PF00800 Prephenate dehydratase 106 286 5.1E-58 T 28-03-2018 IPR001086 Prephenate dehydratase GO:0004664|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 Pfam PF01817 Chorismate mutase type II 11 89 1.5E-17 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 Gene3D G3DSA:1.20.59.10 1 112 1.4E-30 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 Gene3D G3DSA:3.40.190.10 198 273 1.0E-22 T 28-03-2018 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 SUPERFAMILY SSF55021 280 377 2.44E-22 T 28-03-2018 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 Gene3D G3DSA:3.40.190.10 113 197 6.3E-30 T 28-03-2018 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 SMART SM00830 11 91 2.0E-25 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 PIRSF PIRSF001500 1 380 1.2E-142 T 28-03-2018 IPR008242 Bifunctional P-protein, chorismate mutase/prephenate dehydratase GO:0004106|GO:0004664|GO:0005737|GO:0009094 KEGG: 00400+4.2.1.51|MetaCyc: PWY-7432 CI104_RS18970 ecd540f5b2d76607d6fde2ebdd6d7ce1 386 SUPERFAMILY SSF48600 6 93 9.71E-23 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 Hamap MF_01367 50S ribosomal protein L14 [rplN]. 1 123 28.664 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 Pfam PF00238 Ribosomal protein L14p/L23e 1 123 6.9E-55 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 TIGRFAM TIGR01067 rplN_bact: ribosomal protein uL14 1 123 4.4E-60 T 28-03-2018 IPR005745 Ribosomal protein L14P, bacterial-type GO:0003735|GO:0006412|GO:0015934 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 SMART SM01374 1 123 3.9E-86 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 ProSitePatterns PS00049 Ribosomal protein L14 signature. 60 86 - T 28-03-2018 IPR019972 Ribosomal protein L14P, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 Gene3D G3DSA:2.40.150.20 1 123 2.9E-53 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CI104_RS02095 085432ff5f62d9b40e7465024b6fef37 123 SUPERFAMILY SSF50193 2 122 1.57E-51 T 28-03-2018 IPR000218 Ribosomal protein L14P GO:0003735|GO:0005840|GO:0006412 CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 10 246 8.5E-55 T 28-03-2018 CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 Gene3D G3DSA:3.40.50.720 34 247 1.1E-58 T 28-03-2018 CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 Gene3D G3DSA:3.40.50.720 1 33 1.9E-6 T 28-03-2018 CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 2 189 0.0059 T 28-03-2018 CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 SUPERFAMILY SSF51735 3 246 1.02E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 3 20 5.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 5.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 5.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 5.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 5.3E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.9E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.9E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21060 f176b870c6ce4c478e10479e424aa205 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 1.9E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 41 53 6.0E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 108 135 6.0E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 9 35 6.0E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 86 108 6.0E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 254 279 6.0E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PRINTS PR01575 Formyltetrahydrofolate deformylase signature 232 254 6.0E-70 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 Pfam PF00551 Formyl transferase 86 262 4.0E-54 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 SUPERFAMILY SSF53328 86 279 2.49E-59 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 Gene3D G3DSA:3.40.50.170 88 277 6.0E-53 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 Hamap MF_01927 Formyltetrahydrofolate deformylase [purU]. 4 280 46.21 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 SUPERFAMILY SSF55021 6 56 4.58E-9 T 28-03-2018 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 Gene3D G3DSA:3.30.70.260 3 87 3.9E-12 T 28-03-2018 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 PIRSF PIRSF036480 4 280 1.4E-113 T 28-03-2018 CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 Pfam PF01842 ACT domain 8 69 5.7E-8 T 28-03-2018 IPR002912 ACT domain CI104_RS14330 e5f6c468e45bbb76167e047561600cdd 280 TIGRFAM TIGR00655 PurU: formyltetrahydrofolate deformylase 8 280 1.2E-131 T 28-03-2018 IPR004810 Formyltetrahydrofolate deformylase GO:0006189|GO:0008864 KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 SMART SM00833 224 317 1.5E-10 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 Gene3D G3DSA:3.30.1220.10 209 318 8.3E-21 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 6 182 9.7E-51 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 SUPERFAMILY SSF52540 3 201 3.58E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 SUPERFAMILY SSF90002 224 315 1.22E-24 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 224 315 3.4E-18 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CI104_RS21385 7be001eb4b96513d54368e180cd1f03e 319 Gene3D G3DSA:3.40.50.300 1 202 2.0E-45 T 28-03-2018 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 Pfam PF00579 tRNA synthetases class I (W and Y) 31 328 9.0E-93 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 SMART SM00363 358 419 1.3E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 52 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 TIGRFAM TIGR00234 tyrS: tyrosine--tRNA ligase 2 424 2.0E-148 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 Hamap MF_02006 Tyrosine--tRNA ligase [tyrS]. 4 423 46.572 T 28-03-2018 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 GO:0004831 KEGG: 00970+6.1.1.1 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 SUPERFAMILY SSF55174 327 423 3.14E-20 T 28-03-2018 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 Gene3D G3DSA:3.10.290.10 331 424 1.2E-19 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 Pfam PF01479 S4 domain 359 403 4.8E-6 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 46 68 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 188 210 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 167 182 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 PRINTS PR01040 Tyrosyl-tRNA synthetase signature 221 233 1.7E-32 T 28-03-2018 IPR002307 Tyrosine-tRNA ligase GO:0000166|GO:0004831|GO:0005524|GO:0005737|GO:0006437 KEGG: 00970+6.1.1.1 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 Gene3D G3DSA:1.10.240.10 228 330 1.5E-32 T 28-03-2018 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 SUPERFAMILY SSF52374 4 328 5.63E-110 T 28-03-2018 CI104_RS12470 333933ba4f67db0dae6117893fc26823 424 Gene3D G3DSA:3.40.50.620 1 227 7.9E-71 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 PIRSF PIRSF002741 2 541 6.5E-117 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 SUPERFAMILY SSF53850 34 524 1.63E-150 T 28-03-2018 CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 80 462 6.3E-91 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 Gene3D G3DSA:3.10.105.10 311 511 1.1E-57 T 28-03-2018 CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 Gene3D G3DSA:3.90.76.10 62 174 2.6E-35 T 28-03-2018 CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 Gene3D G3DSA:3.40.190.10 175 310 3.2E-39 T 28-03-2018 CI104_RS14280 676ddc6d01e05eee2c9fb7e3af120460 542 ProSitePatterns PS01040 Bacterial extracellular solute-binding proteins, family 5 signature. 86 107 - T 28-03-2018 IPR023765 Solute-binding protein family 5, conserved site CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 SMART SM00257 97 142 3.1E-6 T 28-03-2018 IPR018392 LysM domain CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 Pfam PF01551 Peptidase family M23 313 407 2.0E-32 T 28-03-2018 IPR016047 Peptidase M23 CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 Pfam PF08525 Opacity-associated protein A N-terminal motif 12 39 2.4E-8 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 Gene3D G3DSA:3.10.350.10 85 195 3.4E-6 T 28-03-2018 CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 Gene3D G3DSA:2.70.70.10 280 437 9.2E-46 T 28-03-2018 CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 SUPERFAMILY SSF51261 168 408 2.72E-69 T 28-03-2018 IPR011055 Duplicated hybrid motif CI104_RS15340 2dd35a56a1e6411d25f16284647c9178 440 Pfam PF01476 LysM domain 98 141 5.1E-8 T 28-03-2018 IPR018392 LysM domain CI104_RS02200 1607ec82929f58607190cd7949b412be 458 SUPERFAMILY SSF51735 232 376 2.8E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Gene3D G3DSA:3.40.50.720 233 366 5.0E-25 T 28-03-2018 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 SUPERFAMILY SSF116726 148 226 1.26E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Pfam PF02080 TrkA-C domain 390 451 1.3E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Pfam PF02080 TrkA-C domain 157 225 1.6E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Gene3D G3DSA:3.30.70.1450 367 458 3.4E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 PRINTS PR00335 TrkA potassium uptake protein signature 49 59 2.5E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 PRINTS PR00335 TrkA potassium uptake protein signature 60 70 2.5E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 PRINTS PR00335 TrkA potassium uptake protein signature 19 33 2.5E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 PRINTS PR00335 TrkA potassium uptake protein signature 2 16 2.5E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 PRINTS PR00335 TrkA potassium uptake protein signature 73 87 2.5E-36 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 SUPERFAMILY SSF51735 1 152 2.24E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Gene3D G3DSA:3.30.70.1450 140 232 1.3E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Pfam PF02254 TrkA-N domain 235 350 2.7E-26 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Pfam PF02254 TrkA-N domain 3 111 8.6E-30 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 Gene3D G3DSA:3.40.50.720 2 139 2.7E-27 T 28-03-2018 CI104_RS02200 1607ec82929f58607190cd7949b412be 458 SUPERFAMILY SSF116726 390 450 1.57E-6 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS14600 28bba2ea21905c8440695c4d216eaae3 84 Pfam PF04226 Transglycosylase associated protein 34 83 6.1E-14 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CI104_RS17960 cc04b4e3ab81d5ecb01ea788799c4d67 160 SUPERFAMILY SSF50249 3 64 1.62E-10 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS17960 cc04b4e3ab81d5ecb01ea788799c4d67 160 Gene3D G3DSA:2.40.50.140 1 72 2.1E-14 T 28-03-2018 CI104_RS17960 cc04b4e3ab81d5ecb01ea788799c4d67 160 Pfam PF00313 'Cold-shock' DNA-binding domain 4 64 7.9E-9 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS16960 59313af30f29aceada0b7710f1787826 312 Gene3D G3DSA:3.40.1190.20 47 312 1.8E-54 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16960 59313af30f29aceada0b7710f1787826 312 SUPERFAMILY SSF53613 7 290 2.81E-69 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16960 59313af30f29aceada0b7710f1787826 312 Gene3D G3DSA:2.20.150.10 12 46 8.7E-11 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CI104_RS16960 59313af30f29aceada0b7710f1787826 312 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 5 308 4.2E-99 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CI104_RS16960 59313af30f29aceada0b7710f1787826 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16960 59313af30f29aceada0b7710f1787826 312 TIGRFAM TIGR03828 pfkB: 1-phosphofructokinase 5 308 2.0E-101 T 28-03-2018 IPR022463 Fructose 1-phosphate kinase GO:0008662 KEGG: 00051+2.7.1.56 CI104_RS16960 59313af30f29aceada0b7710f1787826 312 PIRSF PIRSF000535 2 311 9.5E-119 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CI104_RS16960 59313af30f29aceada0b7710f1787826 312 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 39 63 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16960 59313af30f29aceada0b7710f1787826 312 Pfam PF00294 pfkB family carbohydrate kinase 14 293 3.5E-68 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 Pfam PF13193 AMP-binding enzyme C-terminal domain 446 520 2.2E-11 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 Gene3D G3DSA:3.40.50.980 193 347 2.8E-29 T 28-03-2018 CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 Gene3D G3DSA:3.40.50.980 25 192 1.8E-26 T 28-03-2018 CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 ProSitePatterns PS00455 Putative AMP-binding domain signature. 187 198 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 Pfam PF00501 AMP-binding enzyme 36 437 1.4E-76 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 SUPERFAMILY SSF56801 5 531 8.5E-125 T 28-03-2018 CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 Gene3D G3DSA:3.30.300.30 431 535 1.1E-22 T 28-03-2018 CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 Gene3D G3DSA:2.30.38.10 348 430 2.6E-21 T 28-03-2018 CI104_RS07335 f71343f7d9007ff57f37e93d307b43c7 535 TIGRFAM TIGR02275 DHB_AMP_lig: (2,3-dihydroxybenzoyl)adenylate synthase 3 527 5.8E-271 T 28-03-2018 IPR011963 2,3-dihydroxybenzoate-AMP ligase GO:0008668|GO:0019290 CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 SUPERFAMILY SSF56655 1 243 7.33E-76 T 28-03-2018 CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 Gene3D G3DSA:3.30.540.10 1 148 1.7E-41 T 28-03-2018 CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 Gene3D G3DSA:3.40.190.80 149 245 4.5E-35 T 28-03-2018 CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 Pfam PF00459 Inositol monophosphatase family 2 233 2.5E-50 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 80 93 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 204 218 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CI104_RS22355 67ed435d4e4d65892a3fde92d732bfe0 246 TIGRFAM TIGR01331 bisphos_cysQ: 3'(2'),5'-bisphosphate nucleotidase 1 244 2.0E-111 T 28-03-2018 IPR006240 3(2),5 -bisphosphate nucleotidase, bacterial GO:0000287|GO:0016020 KEGG: 00920+3.1.3.7 CI104_RS10895 c8abb16f97e7babfa12bc76decf1ddba 85 SUPERFAMILY SSF159871 3 85 4.84E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS10895 c8abb16f97e7babfa12bc76decf1ddba 85 Gene3D G3DSA:3.30.1660.10 21 85 2.9E-22 T 28-03-2018 IPR025543 Dodecin-like CI104_RS10895 c8abb16f97e7babfa12bc76decf1ddba 85 Pfam PF07338 Protein of unknown function (DUF1471) 34 85 7.0E-21 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 SUPERFAMILY SSF47781 404 554 8.01E-18 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 SMART SM00532 29 426 1.1E-89 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Hamap MF_01587 DNA ligase B [ligB]. 3 559 51.315 T 28-03-2018 IPR020923 DNA ligase B GO:0003911|GO:0006259 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 30 308 7.0E-28 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Gene3D G3DSA:1.10.287.610 24 86 4.4E-12 T 28-03-2018 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Gene3D G3DSA:3.30.1490.70 235 312 1.2E-6 T 28-03-2018 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Gene3D G3DSA:2.40.50.140 313 381 1.6E-16 T 28-03-2018 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Gene3D G3DSA:1.10.150.20 482 547 0.0039 T 28-03-2018 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Gene3D G3DSA:1.10.150.20 410 481 6.3E-8 T 28-03-2018 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 313 387 9.8E-19 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 125 154 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 SUPERFAMILY SSF56091 25 307 1.04E-64 T 28-03-2018 CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 SUPERFAMILY SSF50249 311 388 1.47E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS00470 bfeac5dc27e31fd7e4f0ac3ac4bb5904 561 Gene3D G3DSA:3.30.470.30 129 234 3.4E-17 T 28-03-2018 CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 Pfam PF03797 Autotransporter beta-domain 702 938 2.5E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 SUPERFAMILY SSF51126 172 652 2.51E-18 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 SMART SM00869 699 949 1.2E-42 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 Gene3D G3DSA:2.160.20.20 446 673 6.8E-10 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 Gene3D G3DSA:2.160.20.20 18 445 5.3E-14 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 Gene3D G3DSA:2.40.128.130 674 960 5.1E-51 T 28-03-2018 CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 SUPERFAMILY SSF103515 668 960 5.1E-53 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 574 960 9.3E-82 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS20785 1c2065fdd351bfde6fd5eb5a5be176b5 960 Pfam PF03212 Pertactin 570 652 8.4E-6 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 4.3E-15 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 Gene3D G3DSA:1.10.10.10 2 17 0.052 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 Gene3D G3DSA:1.10.260.40 18 58 2.4E-18 T 28-03-2018 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 Pfam PF13377 Periplasmic binding protein-like domain 175 343 4.2E-31 T 28-03-2018 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 SUPERFAMILY SSF53822 61 343 1.63E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 Gene3D G3DSA:3.40.50.2300 59 173 1.9E-26 T 28-03-2018 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 Gene3D G3DSA:3.40.50.2300 174 344 1.5E-37 T 28-03-2018 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 SMART SM00354 1 72 3.8E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 SUPERFAMILY SSF47413 1 58 4.79E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 6.0E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20775 e529e5bce18c53ef45ff8b7c6c1264ae 344 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 6.0E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS02115 98f615537815942b22a86925403a8f47 130 Hamap MF_01302_B 30S ribosomal protein S8 [rpsH]. 2 130 31.942 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02115 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1370.30 1 66 2.5E-25 T 28-03-2018 CI104_RS02115 98f615537815942b22a86925403a8f47 130 ProSitePatterns PS00053 Ribosomal protein S8 signature. 100 117 - T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02115 98f615537815942b22a86925403a8f47 130 Pfam PF00410 Ribosomal protein S8 5 129 4.9E-49 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02115 98f615537815942b22a86925403a8f47 130 SUPERFAMILY SSF56047 5 129 4.97E-46 T 28-03-2018 IPR000630 Ribosomal protein S8 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02115 98f615537815942b22a86925403a8f47 130 Gene3D G3DSA:3.30.1490.10 74 129 2.9E-22 T 28-03-2018 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 SUPERFAMILY SSF53067 255 464 3.46E-41 T 28-03-2018 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 134 146 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 Gene3D G3DSA:3.30.420.40 247 465 2.2E-39 T 28-03-2018 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 TIGRFAM TIGR02628 fuculo_kin_coli: L-fuculokinase 4 463 4.2E-229 T 28-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 351 371 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 SUPERFAMILY SSF53067 5 252 3.18E-60 T 28-03-2018 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 Hamap MF_00986 L-fuculokinase [fucK]. 3 464 62.149 T 28-03-2018 IPR013450 L-fuculokinase GO:0005975|GO:0008737 KEGG: 00051+2.7.1.51 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 Gene3D G3DSA:3.30.420.40 1 246 4.6E-58 T 28-03-2018 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 PIRSF PIRSF000538 3 465 3.2E-82 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 259 438 5.8E-24 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS20165 1ac6bcbd92f7bf8c4186e8719dabcfc5 465 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 5 249 6.9E-81 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 Gene3D G3DSA:2.40.50.100 191 376 2.2E-5 T 28-03-2018 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 Pfam PF13437 HlyD family secretion protein 198 300 4.7E-9 T 28-03-2018 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 Gene3D G3DSA:2.40.50.100 57 119 3.6E-8 T 28-03-2018 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 SUPERFAMILY SSF111369 79 313 2.62E-54 T 28-03-2018 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 62 390 1.6E-78 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 Pfam PF13533 Biotin-lipoyl like 87 132 3.6E-14 T 28-03-2018 CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 Hamap MF_01422 Multidrug resistance protein MdtA [mdtA]. 1 413 53.828 T 28-03-2018 IPR022824 Multidrug resistance protein MdtA CI104_RS16605 0de8573f2fd57da90c2c51f55f554171 415 Gene3D G3DSA:1.10.287.470 128 190 4.8E-12 T 28-03-2018 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 SUPERFAMILY SSF47323 391 548 1.33E-46 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Pfam PF09334 tRNA synthetases class I (M) 8 397 1.3E-165 T 28-03-2018 IPR015413 Methionyl/Leucyl tRNA synthetase GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 15 26 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 TIGRFAM TIGR00399 metG_C_term: methionine--tRNA ligase, beta subunit 542 677 1.6E-47 T 28-03-2018 IPR004495 Methionyl-tRNA synthetase, beta subunit, C-terminal GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Hamap MF_00098 Methionine--tRNA ligase [metG]. 6 546 41.936 T 28-03-2018 IPR023458 Methionine-tRNA ligase, type 1 GO:0004825 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 TIGRFAM TIGR00398 metG: methionine--tRNA ligase 8 536 5.0E-209 T 28-03-2018 IPR014758 Methionyl-tRNA synthetase GO:0000166|GO:0004825|GO:0005524|GO:0005737|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Gene3D G3DSA:2.40.50.140 567 677 3.1E-24 T 28-03-2018 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 292 307 5.8E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 42 56 5.8E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 10 23 5.8E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 251 262 5.8E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 90 101 5.8E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 PRINTS PR01041 Methionyl-tRNA synthetase signature 385 396 5.8E-26 T 28-03-2018 IPR033911 Methioninyl-tRNA synthetase core domain GO:0004825|GO:0006431 KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Gene3D G3DSA:3.40.50.620 249 372 6.4E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Pfam PF01588 Putative tRNA binding domain 581 674 9.7E-22 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Gene3D G3DSA:2.20.28.20 142 175 2.0E-15 T 28-03-2018 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Gene3D G3DSA:3.40.50.620 4 79 3.2E-23 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 SUPERFAMILY SSF50249 570 676 6.86E-28 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Gene3D G3DSA:2.170.220.10 181 248 1.4E-15 T 28-03-2018 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 SUPERFAMILY SSF52374 176 388 1.23E-107 T 28-03-2018 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 SUPERFAMILY SSF52374 6 141 1.23E-107 T 28-03-2018 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 Gene3D G3DSA:1.10.730.10 374 537 1.8E-36 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS16705 b0ebae5334c9d6822ef08a3d25521a01 677 SUPERFAMILY SSF57770 142 176 1.15E-12 T 28-03-2018 IPR029038 Methionyl-tRNA synthetase, Zn-domain KEGG: 00450+6.1.1.10|KEGG: 00970+6.1.1.10|Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS24195 03bf61dcc2f3b4302b0f17445a07560f 444 Gene3D G3DSA:1.20.1250.20 10 211 7.0E-17 T 28-03-2018 CI104_RS24195 03bf61dcc2f3b4302b0f17445a07560f 444 Pfam PF13347 MFS/sugar transport protein 10 428 7.8E-106 T 28-03-2018 CI104_RS24195 03bf61dcc2f3b4302b0f17445a07560f 444 SUPERFAMILY SSF103473 14 420 4.58E-36 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS24195 03bf61dcc2f3b4302b0f17445a07560f 444 Gene3D G3DSA:1.20.1250.20 212 425 4.5E-14 T 28-03-2018 CI104_RS24195 03bf61dcc2f3b4302b0f17445a07560f 444 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 442 2.4E-111 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 42 812 0.0 T 28-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 Pfam PF00384 Molybdopterin oxidoreductase 85 554 1.0E-101 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 Gene3D G3DSA:2.40.40.20 650 809 6.3E-32 T 28-03-2018 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 Pfam PF01568 Molydopterin dinucleotide binding domain 674 789 7.3E-26 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 Gene3D G3DSA:3.90.55.10 516 605 2.3E-21 T 28-03-2018 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 Gene3D G3DSA:3.90.55.10 36 122 1.8E-11 T 28-03-2018 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 SUPERFAMILY SSF50692 667 812 9.95E-40 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 SUPERFAMILY SSF53706 43 661 8.51E-159 T 28-03-2018 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 497 514 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 Gene3D G3DSA:3.40.228.10 181 453 3.4E-57 T 28-03-2018 CI104_RS22030 705bffdfc2ded4a127edc24f1b2bcdd8 815 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 713 740 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Pfam PF07724 AAA domain (Cdc48 subfamily) 604 767 7.0E-37 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 SUPERFAMILY SSF81923 9 129 2.09E-16 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 SMART SM00382 210 355 2.5E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 SMART SM00382 605 756 1.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 215 347 2.4E-10 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 306 318 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Gene3D G3DSA:1.10.1780.10 1 159 1.9E-20 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Gene3D G3DSA:3.40.50.300 169 354 3.9E-23 T 28-03-2018 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 10 833 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Gene3D G3DSA:1.10.8.60 356 555 5.2E-34 T 28-03-2018 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Gene3D G3DSA:3.40.50.300 557 806 1.8E-34 T 28-03-2018 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 21 70 1.1E-10 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 SUPERFAMILY SSF52540 554 828 3.93E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 716 730 5.9E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 654 672 5.9E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 683 701 5.9E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 609 627 5.9E-31 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS21605 cd57f59e2bcb7ad51cae34506e624937 837 SUPERFAMILY SSF52540 172 507 6.59E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 229 2.1E-46 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 210 232 - T 28-03-2018 CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 Hamap MF_01847 HMP-PP phosphatase [cof]. 1 272 63.612 T 28-03-2018 IPR023938 HMP-PP phosphatase GO:0016818 CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 SUPERFAMILY SSF56784 1 262 3.45E-60 T 28-03-2018 IPR023214 HAD-like domain CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 Gene3D G3DSA:3.40.50.1000 1 266 4.8E-28 T 28-03-2018 IPR023214 HAD-like domain CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 258 1.9E-48 T 28-03-2018 IPR023214 HAD-like domain CI104_RS06465 1bd838ee292eed0daa4ad4bcf1e80c13 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 258 1.4E-54 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 SUPERFAMILY SSF52540 4 225 9.43E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 SMART SM00382 282 477 1.3E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 SMART SM00382 30 218 4.2E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 Pfam PF00005 ABC transporter 274 427 1.7E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 Pfam PF00005 ABC transporter 21 170 8.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 Gene3D G3DSA:3.40.50.300 255 496 4.3E-33 T 28-03-2018 CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 SUPERFAMILY SSF52540 258 488 3.04E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 Gene3D G3DSA:3.40.50.300 2 240 4.0E-53 T 28-03-2018 CI104_RS02400 046764b41f84604dc450d8ce466a549c 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 TIGRFAM TIGR02395 rpoN_sigma: RNA polymerase sigma-54 factor 9 474 1.9E-164 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 Pfam PF04963 Sigma-54 factor, core binding domain 114 303 3.1E-62 T 28-03-2018 IPR007046 RNA polymerase sigma factor 54, core-binding GO:0003677|GO:0006352 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 ProSitePatterns PS00717 Sigma-54 factors family signature 1. 364 383 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 Pfam PF00309 Sigma-54 factor, Activator interacting domain (AID) 5 48 1.0E-15 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 PIRSF PIRSF000774 1 477 1.7E-153 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 ProSitePatterns PS00718 Sigma-54 factors family signature 2. 455 462 - T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 Pfam PF04552 Sigma-54, DNA binding domain 317 475 9.9E-71 T 28-03-2018 IPR007634 RNA polymerase sigma factor 54, DNA-binding CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 PRINTS PR00045 Sigma-54 factor signature 186 203 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 PRINTS PR00045 Sigma-54 factor signature 376 388 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 PRINTS PR00045 Sigma-54 factor signature 450 468 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 PRINTS PR00045 Sigma-54 factor signature 392 403 2.0E-31 T 28-03-2018 IPR000394 RNA polymerase sigma factor 54 GO:0003677|GO:0003700|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS02695 5fee41d6da5cc32127704741ce809827 477 Gene3D G3DSA:1.10.10.10 323 410 2.9E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Gene3D G3DSA:3.10.20.310 267 346 2.1E-12 T 28-03-2018 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Gene3D G3DSA:3.10.20.310 92 174 4.2E-12 T 28-03-2018 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Pfam PF01103 Surface antigen 448 809 5.7E-101 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 PIRSF PIRSF006076 1 809 1.7E-257 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Gene3D G3DSA:3.10.20.310 18 91 1.2E-8 T 28-03-2018 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Gene3D G3DSA:2.40.160.50 388 809 2.0E-87 T 28-03-2018 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Pfam PF07244 Surface antigen variable number repeat 266 344 5.2E-12 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Pfam PF07244 Surface antigen variable number repeat 92 172 6.9E-11 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Pfam PF07244 Surface antigen variable number repeat 176 263 2.1E-15 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Pfam PF07244 Surface antigen variable number repeat 348 421 4.9E-14 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Hamap MF_01430 Outer membrane protein assembly factor BamA [bamA]. 2 809 26.317 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Gene3D G3DSA:3.10.20.310 350 387 0.018 T 28-03-2018 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 Gene3D G3DSA:3.10.20.310 175 266 2.5E-21 T 28-03-2018 CI104_RS05335 8d8e96d5729261cbb0c52af0881b1148 809 TIGRFAM TIGR03303 OM_YaeT: outer membrane protein assembly complex, YaeT protein 24 809 1.3E-287 T 28-03-2018 IPR023707 Outer membrane protein assembly factor BamA GO:0071709 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 Gene3D G3DSA:3.40.50.80 201 336 1.8E-25 T 28-03-2018 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 Pfam PF00175 Oxidoreductase NAD-binding domain 210 311 3.5E-21 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 298 306 5.9E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 151 158 5.9E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 209 228 5.9E-6 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 Gene3D G3DSA:3.10.20.30 1 110 8.5E-22 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 SUPERFAMILY SSF63380 106 202 1.97E-22 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 SUPERFAMILY SSF52343 189 328 1.27E-33 T 28-03-2018 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 Gene3D G3DSA:2.40.30.10 111 200 2.6E-20 T 28-03-2018 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 40 48 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 Pfam PF00970 Oxidoreductase FAD-binding domain 128 200 7.4E-14 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 134 146 4.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 209 228 4.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 194 203 4.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 298 306 4.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 151 158 4.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 PRINTS PR00410 Phenol hydroxylase reductase family signature 234 243 4.0E-27 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 85 4.1E-14 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS13180 3912478b52e440c10a559806bf4202dd 338 SUPERFAMILY SSF54292 3 94 8.52E-24 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 SMART SM00418 8 86 8.6E-30 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 32 50 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 Pfam PF01022 Bacterial regulatory protein, arsR family 15 60 8.7E-18 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 SUPERFAMILY SSF46785 5 105 2.59E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 30 41 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 58 73 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 43 58 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 10 25 1.3E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS20870 ad58bfe9dd1b1faef7badd0f17fa4ff7 117 Gene3D G3DSA:1.10.10.10 3 107 5.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 SMART SM00342 210 293 5.5E-36 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 Gene3D G3DSA:1.10.10.60 107 245 5.0E-16 T 28-03-2018 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 Gene3D G3DSA:1.10.10.60 246 300 9.0E-15 T 28-03-2018 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 Pfam PF10114 Sensory domain found in PocR 7 166 2.5E-44 T 28-03-2018 IPR018771 PocR domain CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 277 293 1.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 277 1.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 SUPERFAMILY SSF46689 193 244 6.72E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 Pfam PF12833 Helix-turn-helix domain 217 294 8.7E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 SUPERFAMILY SSF46689 247 296 2.51E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS16175 e757683baddef014fc700061d3cc8d7f 305 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 247 289 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 Pfam PF02082 Transcriptional regulator 1 83 5.4E-27 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 Hamap MF_01176 HTH-type transcriptional regulator IscR [iscR]. 1 163 46.465 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 SUPERFAMILY SSF46785 2 133 9.6E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 ProSitePatterns PS01332 Rrf2-type HTH domain signature. 49 67 - T 28-03-2018 IPR030489 Transcription regulator Rrf2-type, conserved site CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 TIGRFAM TIGR02010 IscR: iron-sulfur cluster assembly transcription factor IscR 1 134 4.4E-66 T 28-03-2018 IPR010242 Transcription factor HTH, IscR GO:0003690|GO:0003700|GO:0006355 CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 1 131 1.9E-46 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CI104_RS18625 e85e635d9f2cfd73849549e6cab8419b 163 Gene3D G3DSA:1.10.10.10 1 140 7.8E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 SUPERFAMILY SSF46785 2 86 1.22E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 Gene3D G3DSA:3.40.190.10 178 259 1.1E-17 T 28-03-2018 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 Gene3D G3DSA:3.40.190.10 94 177 2.5E-12 T 28-03-2018 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 Pfam PF03466 LysR substrate binding domain 90 288 1.6E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 SUPERFAMILY SSF53850 83 289 4.52E-32 T 28-03-2018 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25700 7b542dec49131c8aca248281e37d680b 291 Gene3D G3DSA:1.10.10.10 2 90 3.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 SUPERFAMILY SSF46785 2 86 1.22E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 Gene3D G3DSA:3.40.190.10 178 259 1.1E-17 T 28-03-2018 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 Gene3D G3DSA:3.40.190.10 94 177 2.5E-12 T 28-03-2018 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 Pfam PF03466 LysR substrate binding domain 90 288 1.6E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 SUPERFAMILY SSF53850 83 289 4.52E-32 T 28-03-2018 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 1.3E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25670 7b542dec49131c8aca248281e37d680b 291 Gene3D G3DSA:1.10.10.10 2 90 3.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15525 e4c0d96b77f60fb3a56b8be1f3cfa540 189 Gene3D G3DSA:2.60.40.1090 40 189 6.2E-4 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15525 e4c0d96b77f60fb3a56b8be1f3cfa540 189 SMART SM00972 127 186 1.4E-12 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS15525 e4c0d96b77f60fb3a56b8be1f3cfa540 189 Pfam PF05229 Spore Coat Protein U domain 27 185 4.0E-23 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 PRINTS PR00069 Aldo-keto reductase signature 49 73 4.8E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 PRINTS PR00069 Aldo-keto reductase signature 114 132 4.8E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 PRINTS PR00069 Aldo-keto reductase signature 151 168 4.8E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 PRINTS PR00069 Aldo-keto reductase signature 221 245 4.8E-11 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 SUPERFAMILY SSF51430 15 289 9.56E-65 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 Pfam PF00248 Aldo/keto reductase family 19 287 6.3E-47 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS13650 de335bbc4c6afa8eb79a4d95131d8b8e 295 Gene3D G3DSA:3.20.20.100 7 295 1.8E-63 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 ProSitePatterns PS00169 Delta-aminolevulinic acid dehydratase active site. 240 252 - T 28-03-2018 IPR030656 Delta-aminolevulinic acid dehydratase, active site KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PIRSF PIRSF001415 1 323 7.0E-148 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 265 280 4.2E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 121 135 4.2E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 151 170 4.2E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 295 314 4.2E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 189 208 4.2E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 PRINTS PR00144 Delta-aminolevulinic acid dehydratase signature 240 256 4.2E-54 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 Gene3D G3DSA:3.20.20.70 1 321 3.0E-137 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 SUPERFAMILY SSF51569 4 319 5.27E-129 T 28-03-2018 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 SMART SM01004 3 321 6.8E-208 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS06000 47c9f3876ed42239438cea5f86496cfd 324 Pfam PF00490 Delta-aminolevulinic acid dehydratase 6 319 8.0E-135 T 28-03-2018 IPR001731 Delta-aminolevulinic acid dehydratase GO:0004655|GO:0033014|GO:0046872 KEGG: 00860+4.2.1.24|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451|Reactome: R-HSA-6798695 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SUPERFAMILY SSF54991 696 794 5.23E-31 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SUPERFAMILY SSF46955 403 475 1.74E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SMART SM00873 212 385 2.5E-99 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:3.30.930.10 490 690 8.0E-39 T 28-03-2018 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:3.30.70.380 698 794 1.3E-23 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Hamap MF_00283 Phenylalanine--tRNA ligase beta subunit [pheT]. 1 788 49.634 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 TIGRFAM TIGR00472 pheT_bact: phenylalanine--tRNA ligase, beta subunit 1 794 1.8E-298 T 28-03-2018 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit GO:0000287|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SUPERFAMILY SSF56037 195 394 1.54E-77 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:2.40.50.140 54 140 3.8E-45 T 28-03-2018 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Pfam PF03147 Ferredoxin-fold anticodon binding domain 701 794 1.5E-28 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Pfam PF03484 tRNA synthetase B5 domain 406 471 2.1E-20 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:3.30.56.10 141 184 1.6E-8 T 28-03-2018 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:3.30.56.10 402 475 3.7E-25 T 28-03-2018 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SUPERFAMILY SSF55681 467 690 5.96E-57 T 28-03-2018 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:3.30.56.10 1 53 2.6E-11 T 28-03-2018 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Gene3D G3DSA:3.50.40.10 195 395 3.6E-73 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SMART SM00874 403 471 2.8E-30 T 28-03-2018 IPR005147 tRNA synthetase, B5-domain GO:0000287|GO:0003723|GO:0005524|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SMART SM00896 701 794 9.7E-46 T 28-03-2018 IPR005121 Ferrodoxin-fold anticodon-binding domain KEGG: 00970+6.1.1.20 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 SUPERFAMILY SSF50249 35 196 1.03E-51 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Pfam PF01588 Putative tRNA binding domain 45 145 2.1E-28 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CI104_RS11960 90b590866e294b24ec96b38bb0ea1b90 795 Pfam PF03483 B3/4 domain 212 385 4.3E-71 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS17660 48070ce21f5927fae12ac062788b92bd 297 Pfam PF08338 Domain of unknown function (DUF1731) 249 295 2.1E-18 T 28-03-2018 IPR013549 Domain of unknown function DUF1731 CI104_RS17660 48070ce21f5927fae12ac062788b92bd 297 SUPERFAMILY SSF51735 1 296 1.26E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS17660 48070ce21f5927fae12ac062788b92bd 297 TIGRFAM TIGR01777 yfcH: TIGR01777 family protein 3 292 2.1E-110 T 28-03-2018 IPR010099 Epimerase family protein SDR39U1 CI104_RS17660 48070ce21f5927fae12ac062788b92bd 297 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 214 1.4E-25 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS17660 48070ce21f5927fae12ac062788b92bd 297 Gene3D G3DSA:3.40.50.720 1 297 2.4E-41 T 28-03-2018 CI104_RS00265 a3628b1c9442b990af34ba8f626ec2c5 104 Gene3D G3DSA:3.40.50.2300 2 104 1.4E-36 T 28-03-2018 CI104_RS00265 a3628b1c9442b990af34ba8f626ec2c5 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 94 6.0E-20 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS00265 a3628b1c9442b990af34ba8f626ec2c5 104 SUPERFAMILY SSF52794 1 101 1.49E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 Pfam PF00501 AMP-binding enzyme 48 469 1.8E-78 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 Gene3D G3DSA:3.40.50.980 189 359 4.7E-32 T 28-03-2018 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 Gene3D G3DSA:3.30.300.30 461 564 5.8E-14 T 28-03-2018 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 Gene3D G3DSA:2.30.38.10 372 460 5.3E-19 T 28-03-2018 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 Gene3D G3DSA:3.40.50.980 21 188 3.7E-31 T 28-03-2018 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 SUPERFAMILY SSF56801 385 568 1.7E-102 T 28-03-2018 CI104_RS09955 9b73c69491c1a078c40ecb9673318fe4 582 SUPERFAMILY SSF56801 23 356 1.7E-102 T 28-03-2018 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 Gene3D G3DSA:3.40.50.720 111 272 6.3E-31 T 28-03-2018 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 SUPERFAMILY SSF53223 2 101 2.24E-31 T 28-03-2018 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 Gene3D G3DSA:3.40.50.10860 1 110 7.0E-37 T 28-03-2018 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 TIGRFAM TIGR00507 aroE: shikimate dehydrogenase 3 270 1.0E-106 T 28-03-2018 IPR011342 Shikimate dehydrogenase GO:0004764|GO:0019632|GO:0050661|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 1 269 32.64 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 SUPERFAMILY SSF51735 102 268 1.96E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 6 88 2.7E-23 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CI104_RS02240 8721b3200df20aa19cc98208c6411c1a 272 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 190 5.7E-10 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 SMART SM00841 131 186 6.9E-33 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 PIRSF PIRSF005901 2 188 3.3E-66 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 123 2.9E-22 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Gene3D G3DSA:2.30.30.30 4 63 3.2E-24 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Gene3D G3DSA:2.40.50.140 67 129 2.2E-24 T 28-03-2018 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 7 61 1.4E-23 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Hamap MF_00141 Elongation factor P [efp]. 3 187 50.493 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 SUPERFAMILY SSF50249 70 128 2.96E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 SUPERFAMILY SSF50249 130 187 1.2E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 TIGRFAM TIGR00038 efp: translation elongation factor P 6 187 4.4E-76 T 28-03-2018 IPR011768 Translation elongation factor P GO:0003746|GO:0005737|GO:0006414 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 SMART SM01185 69 123 1.2E-25 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 SUPERFAMILY SSF50104 3 63 2.35E-17 T 28-03-2018 IPR008991 Translation protein SH3-like domain CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 ProSitePatterns PS01275 Elongation factor P signature. 152 171 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Pfam PF09285 Elongation factor P, C-terminal 131 186 4.3E-26 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CI104_RS22660 5a973879b98e2eeb5b7e16efd2a3234f 188 Gene3D G3DSA:2.40.50.140 131 186 1.4E-27 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 8 345 4.0E-117 T 28-03-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 Gene3D G3DSA:1.20.200.10 103 372 8.8E-77 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 SMART SM00998 361 440 5.1E-26 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 SUPERFAMILY SSF48557 13 445 4.08E-110 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 Pfam PF00206 Lyase 13 293 9.0E-55 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 Gene3D G3DSA:1.10.275.10 1 102 3.6E-14 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 Pfam PF10397 Adenylosuccinate lyase C-terminus 362 439 5.9E-18 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 Gene3D G3DSA:1.10.40.30 373 440 6.6E-22 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00145 Argininosuccinate lyase family signature 273 289 1.8E-9 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00145 Argininosuccinate lyase family signature 138 158 1.8E-9 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00145 Argininosuccinate lyase family signature 228 252 1.8E-9 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00145 Argininosuccinate lyase family signature 97 119 1.8E-9 T 28-03-2018 CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00149 Fumarate lyase superfamily signature 143 161 1.0E-20 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00149 Fumarate lyase superfamily signature 273 289 1.0E-20 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00149 Fumarate lyase superfamily signature 228 255 1.0E-20 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 PRINTS PR00149 Fumarate lyase superfamily signature 98 116 1.0E-20 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS13790 309fdf7e7117cf502722f263767d1070 454 ProSitePatterns PS00163 Fumarate lyases signature. 273 282 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS02490 8e513fef587de6a63ba269bcf2357b03 1266 Pfam PF13502 AsmA-like C-terminal region 1010 1252 2.9E-62 T 28-03-2018 IPR032712 AsmA-like, C-terminal CI104_RS02490 8e513fef587de6a63ba269bcf2357b03 1266 Pfam PF13116 Protein of unknown function 505 789 1.2E-95 T 28-03-2018 IPR025263 Domain of unknown function DUF3971 CI104_RS02490 8e513fef587de6a63ba269bcf2357b03 1266 TIGRFAM TIGR02099 TIGR02099: TIGR02099 family protein 2 1262 0.0 T 28-03-2018 IPR011836 Conserved hypothetical protein CHP02099 CI104_RS27955 74406f230ec7d210cd6838325b89a6dd 69 Pfam PF00817 impB/mucB/samB family 1 68 1.4E-16 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS27955 74406f230ec7d210cd6838325b89a6dd 69 SUPERFAMILY SSF56672 1 68 8.9E-18 T 28-03-2018 CI104_RS27955 74406f230ec7d210cd6838325b89a6dd 69 Gene3D G3DSA:3.30.70.270 1 69 5.6E-17 T 28-03-2018 CI104_RS09690 6eab8cd36973a5b6c23bb196a9cb6d71 163 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 1.1E-35 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS09690 6eab8cd36973a5b6c23bb196a9cb6d71 163 SUPERFAMILY SSF141452 2 161 1.83E-43 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS09690 6eab8cd36973a5b6c23bb196a9cb6d71 163 Gene3D G3DSA:2.30.110.20 1 163 2.8E-50 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS09690 6eab8cd36973a5b6c23bb196a9cb6d71 163 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 3.7E-49 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS20260 2c1e9cd6e360dc11f8577f52fc4dd803 401 SUPERFAMILY SSF53383 5 397 2.26E-108 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS20260 2c1e9cd6e360dc11f8577f52fc4dd803 401 TIGRFAM TIGR03392 FeS_syn_CsdA: cysteine desulfurase, catalytic subunit CsdA 4 401 1.6E-227 T 28-03-2018 IPR022471 Cysteine desulphurase, catalytic subunit, CsdA GO:0016226|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CI104_RS20260 2c1e9cd6e360dc11f8577f52fc4dd803 401 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 213 232 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CI104_RS20260 2c1e9cd6e360dc11f8577f52fc4dd803 401 Pfam PF00266 Aminotransferase class-V 21 388 2.1E-138 T 28-03-2018 IPR000192 Aminotransferase class V domain CI104_RS20260 2c1e9cd6e360dc11f8577f52fc4dd803 401 Gene3D G3DSA:3.90.1150.10 279 395 9.9E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS20260 2c1e9cd6e360dc11f8577f52fc4dd803 401 Gene3D G3DSA:3.40.640.10 31 278 3.3E-57 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 SMART SM00642 15 414 2.6E-155 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 Pfam PF11941 Domain of unknown function (DUF3459) 459 548 2.6E-9 T 28-03-2018 IPR022567 Glycosyl hydrolase, C-terminal (DUF3459) CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 Gene3D G3DSA:3.20.20.80 4 475 6.8E-130 T 28-03-2018 CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 SUPERFAMILY SSF51445 5 472 1.14E-156 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 Pfam PF00128 Alpha amylase, catalytic domain 30 372 8.0E-128 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 Gene3D G3DSA:2.60.40.1180 476 551 3.5E-19 T 28-03-2018 CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 SUPERFAMILY SSF51011 475 549 6.6E-19 T 28-03-2018 CI104_RS22130 f48a40df880bd4a9d24f9e4b697d1027 551 TIGRFAM TIGR02403 trehalose_treC: alpha,alpha-phosphotrehalase 7 549 4.4E-265 T 28-03-2018 IPR012769 Trehalose-6-phosphate hydrolase GO:0005737|GO:0005993|GO:0008788 KEGG: 00500+3.2.1.93 CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 Pfam PF00072 Response regulator receiver domain 3 112 1.8E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 Gene3D G3DSA:1.10.10.10 119 223 4.7E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 SMART SM00862 145 220 2.1E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 SUPERFAMILY SSF52172 1 173 2.99E-38 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 SMART SM00448 1 112 4.0E-39 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 220 2.4E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS10980 2251872304f70d20ea87beb4bf55e16d 223 Gene3D G3DSA:3.40.50.2300 1 118 5.7E-34 T 28-03-2018 CI104_RS19715 8a06bbf1e01ec36dafc208e8fefc44d6 187 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 5 171 4.3E-76 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CI104_RS19715 8a06bbf1e01ec36dafc208e8fefc44d6 187 TIGRFAM TIGR00821 EII-GUT: PTS system, glucitol/sorbitol-specific, IIC component 1 181 4.6E-112 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CI104_RS19715 8a06bbf1e01ec36dafc208e8fefc44d6 187 PIRSF PIRSF038321 2 182 6.3E-89 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CI104_RS12400 5b4f6e30ee520a331680091bf8eae26f 135 ProSitePatterns PS00935 Glyoxalase I signature 2. 69 81 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CI104_RS12400 5b4f6e30ee520a331680091bf8eae26f 135 TIGRFAM TIGR00068 glyox_I: lactoylglutathione lyase 2 134 6.3E-69 T 28-03-2018 IPR004361 Glyoxalase I GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CI104_RS12400 5b4f6e30ee520a331680091bf8eae26f 135 Gene3D G3DSA:3.10.180.10 1 135 1.9E-36 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS12400 5b4f6e30ee520a331680091bf8eae26f 135 SUPERFAMILY SSF54593 1 128 1.75E-34 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS12400 5b4f6e30ee520a331680091bf8eae26f 135 ProSitePatterns PS00934 Glyoxalase I signature 1. 5 26 - T 28-03-2018 IPR018146 Glyoxalase I, conserved site GO:0004462|GO:0046872 KEGG: 00620+4.4.1.5|MetaCyc: PWY-5386|Reactome: R-HSA-70268 CI104_RS12400 5b4f6e30ee520a331680091bf8eae26f 135 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 3 123 1.5E-25 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Pfam PF00384 Molybdopterin oxidoreductase 96 567 6.9E-88 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 SUPERFAMILY SSF53706 37 700 2.49E-202 T 28-03-2018 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Gene3D G3DSA:3.40.50.740 304 668 2.4E-66 T 28-03-2018 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Gene3D G3DSA:3.40.50.740 99 268 2.9E-35 T 28-03-2018 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 3 31 1.3E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Hamap MF_01630 Nitrate reductase [napA]. 1 828 30.473 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Pfam PF01568 Molydopterin dinucleotide binding domain 714 822 1.9E-22 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 44 61 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 TIGRFAM TIGR01706 NAPA: periplasmic nitrate reductase, large subunit 2 828 0.0 T 28-03-2018 IPR010051 Periplasmic nitrate reductase, large subunit GO:0008940|GO:0030151|GO:0042128|GO:0042597|GO:0051539|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 39 92 3.5E-17 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 SUPERFAMILY SSF50692 688 828 7.91E-40 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Gene3D G3DSA:2.20.25.90 34 95 8.3E-15 T 28-03-2018 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 SMART SM00926 39 93 5.4E-14 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17170 54930a06a82733a7df92ae0de1c071b3 828 Gene3D G3DSA:2.40.40.20 669 828 3.1E-33 T 28-03-2018 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 SUPERFAMILY SSF81464 29 116 8.34E-24 T 28-03-2018 IPR011759 Cytochrome C oxidase subunit II, transmembrane domain GO:0016021|GO:0022900 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 PIRSF PIRSF000292 1 313 1.6E-133 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 Pfam PF00116 Cytochrome C oxidase subunit II, periplasmic domain 149 218 4.1E-5 T 28-03-2018 IPR002429 Cytochrome c oxidase subunit II-like C-terminal GO:0004129|GO:0005507|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 TIGRFAM TIGR01433 CyoA: ubiquinol oxidase, subunit II 14 239 7.8E-124 T 28-03-2018 IPR006333 Cytochrome o ubiquinol oxidase subunit II GO:0016020|GO:0016682|GO:0055114 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 Pfam PF06481 COX Aromatic Rich Motif 239 285 4.7E-18 T 28-03-2018 IPR010514 COX aromatic rich motif GO:0008827|GO:0016021|GO:0022900|GO:0055114 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 Gene3D G3DSA:2.60.40.420 114 281 1.4E-52 T 28-03-2018 IPR008972 Cupredoxin CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 Gene3D G3DSA:1.10.287.90 28 113 1.1E-19 T 28-03-2018 CI104_RS06390 40f260b1f484837805bdf58d0f66baec 318 SUPERFAMILY SSF49503 120 282 9.31E-54 T 28-03-2018 IPR008972 Cupredoxin CI104_RS22930 8baaffca4aef4b85cc413adae04401f1 257 Gene3D G3DSA:1.20.1630.10 1 251 4.0E-31 T 28-03-2018 CI104_RS22930 8baaffca4aef4b85cc413adae04401f1 257 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 251 2.1E-33 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CI104_RS23195 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS23195 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23195 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23195 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 CI104_RS23195 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS14150 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS14150 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14150 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14150 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 CI104_RS14150 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS13020 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS13020 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13020 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13020 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 CI104_RS13020 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26165 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:3.30.420.10 131 308 1.7E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26165 a8618a06242a8260def0c9dc774dbb09 467 Gene3D G3DSA:1.10.10.10 9 70 4.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26165 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF46689 12 121 2.15E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS26165 a8618a06242a8260def0c9dc774dbb09 467 Pfam PF13518 Helix-turn-helix domain 16 63 6.5E-9 T 28-03-2018 CI104_RS26165 a8618a06242a8260def0c9dc774dbb09 467 SUPERFAMILY SSF53098 137 296 4.17E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 SUPERFAMILY SSF53738 162 259 7.06E-22 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 376 451 5.2E-10 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Gene3D G3DSA:3.40.120.10 272 374 1.1E-20 T 28-03-2018 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Gene3D G3DSA:3.40.120.10 152 271 1.6E-26 T 28-03-2018 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 SUPERFAMILY SSF53738 261 365 5.89E-29 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Gene3D G3DSA:3.30.310.50 375 455 1.9E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 130 5.5E-35 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 SUPERFAMILY SSF53738 4 174 1.69E-37 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 262 366 5.9E-19 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 SUPERFAMILY SSF55957 371 454 4.71E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 207 220 2.6E-26 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 2.6E-26 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 168 187 2.6E-26 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 236 251 2.6E-26 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 165 256 1.5E-17 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 Gene3D G3DSA:3.40.120.10 1 144 5.6E-38 T 28-03-2018 CI104_RS03320 32fdfd21e2afb49a7d51bc12ff51a25b 462 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 215 236 2.0E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 SUPERFAMILY SSF52540 4 236 9.47E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 TIGRFAM TIGR04406 LPS_export_lptB: LPS export ABC transporter ATP-binding protein 3 241 2.0E-120 T 28-03-2018 IPR030921 LPS export ABC transporter, ATP-binding protein LptB GO:0043190|GO:0055085 CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 Pfam PF00005 ABC transporter 20 166 3.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 SMART SM00382 28 213 4.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS02700 cddcd49a620550ac2a19adfc0d2bc4b8 241 Gene3D G3DSA:3.40.50.300 1 236 9.5E-64 T 28-03-2018 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 SUPERFAMILY SSF50465 298 393 3.17E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 2 393 1.9E-239 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 60.995 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Gene3D G3DSA:2.40.30.10 300 393 4.4E-33 T 28-03-2018 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.2E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 5.6E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Gene3D G3DSA:3.40.50.300 75 203 9.9E-31 T 28-03-2018 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Gene3D G3DSA:3.40.50.300 2 74 4.9E-11 T 28-03-2018 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 7.9E-34 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 Gene3D G3DSA:2.40.30.10 206 299 9.6E-33 T 28-03-2018 CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 SUPERFAMILY SSF52540 6 219 2.02E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02015 575c99a536e21702b7139a0e0920ab16 394 SUPERFAMILY SSF50447 205 301 2.16E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS16135 52ae429eea2caab8515a30644f8cc420 351 Pfam PF11760 Cobalamin synthesis G N-terminal 55 134 2.6E-35 T 28-03-2018 IPR021744 Cobalamin synthesis G, N-terminal KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CI104_RS16135 52ae429eea2caab8515a30644f8cc420 351 Pfam PF11761 Cobalamin biosynthesis central region 140 214 8.1E-8 T 28-03-2018 IPR021745 Cobalamin biosynthesis central region KEGG: 00860+3.7.1.12|MetaCyc: PWY-7377 CI104_RS16135 52ae429eea2caab8515a30644f8cc420 351 SUPERFAMILY SSF159672 6 238 1.83E-58 T 28-03-2018 CI104_RS16135 52ae429eea2caab8515a30644f8cc420 351 Gene3D G3DSA:3.30.420.180 221 351 1.2E-27 T 28-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CI104_RS16135 52ae429eea2caab8515a30644f8cc420 351 SUPERFAMILY SSF159664 224 349 2.75E-31 T 28-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CI104_RS16135 52ae429eea2caab8515a30644f8cc420 351 Pfam PF01890 Cobalamin synthesis G C-terminus 231 346 1.1E-23 T 28-03-2018 IPR002750 CobE/GbiG C-terminal domain GO:0009236 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 SUPERFAMILY SSF51905 361 416 9.83E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 SUPERFAMILY SSF51905 3 250 9.83E-72 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 Gene3D G3DSA:1.20.58.100 423 542 3.2E-29 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 TIGRFAM TIGR01176 fum_red_Fp: fumarate reductase (quinol), flavoprotein subunit 3 582 0.0 T 28-03-2018 IPR005884 Fumarate reductase, flavoprotein subunit GO:0009061|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.4|KEGG: 00620+1.3.5.4|KEGG: 00650+1.3.5.4|KEGG: 00720+1.3.5.4|MetaCyc: PWY-5392|MetaCyc: PWY-5913|MetaCyc: PWY-7384 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 SUPERFAMILY SSF56425 227 358 9.12E-43 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 Gene3D G3DSA:3.50.50.60 1 245 2.5E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 7 581 8.7E-248 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 Pfam PF02910 Fumarate reductase flavoprotein C-term 453 581 1.0E-38 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 Gene3D G3DSA:4.10.80.40 543 576 5.7E-14 T 28-03-2018 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 1.4E-5 T 28-03-2018 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 375 382 1.4E-5 T 28-03-2018 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 Pfam PF00890 FAD binding domain 7 397 7.4E-115 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 1.9E-10 T 28-03-2018 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 360 382 1.9E-10 T 28-03-2018 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 SUPERFAMILY SSF46977 444 587 6.67E-46 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 Gene3D G3DSA:3.90.700.10 246 352 6.3E-30 T 28-03-2018 CI104_RS22615 63837285b1aa9b192e4cf2758a8de1ae 594 PIRSF PIRSF000171 1 574 6.7E-42 T 28-03-2018 CI104_RS07930 82cb57600eb23f5c97940cb079927c14 218 Gene3D G3DSA:3.40.50.1860 1 111 2.0E-5 T 28-03-2018 CI104_RS07930 82cb57600eb23f5c97940cb079927c14 218 Gene3D G3DSA:3.40.50.1860 112 203 4.1E-4 T 28-03-2018 CI104_RS15415 e2a2cfd94747c085c0e6bfb7f9a29637 248 SUPERFAMILY SSF110395 3 242 1.22E-77 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CI104_RS15415 e2a2cfd94747c085c0e6bfb7f9a29637 248 Hamap MF_00795 Copper homeostasis protein CutC [cutC]. 2 243 38.383 T 28-03-2018 IPR005627 Copper homeostasis protein CutC GO:0005507|GO:0055070 Reactome: R-HSA-936837 CI104_RS15415 e2a2cfd94747c085c0e6bfb7f9a29637 248 Pfam PF03932 CutC family 3 200 7.9E-83 T 28-03-2018 IPR023648 Copper homeostasis CutC domain GO:0005507|GO:0055070 Reactome: R-HSA-936837 CI104_RS15415 e2a2cfd94747c085c0e6bfb7f9a29637 248 Gene3D G3DSA:3.20.20.380 1 248 2.0E-93 T 28-03-2018 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Gene3D G3DSA:3.40.50.300 6 97 5.5E-9 T 28-03-2018 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 SUPERFAMILY SSF52540 311 501 1.13E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 SUPERFAMILY SSF52540 9 239 1.69E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 ProSitePatterns PS00211 ABC transporters family signature. 441 455 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Pfam PF00005 ABC transporter 336 469 2.2E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Pfam PF00005 ABC transporter 19 185 1.5E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Gene3D G3DSA:3.40.50.300 98 291 6.2E-45 T 28-03-2018 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 SMART SM00382 28 230 6.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 SMART SM00382 344 514 2.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Pfam PF12848 ABC transporter 224 296 2.2E-12 T 28-03-2018 IPR032781 ABC-transporter extension domain CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Pfam PF16326 ABC transporter C-terminal domain 561 629 1.6E-19 T 28-03-2018 IPR032524 ABC transporter Uup, C-terminal GO:0003677 CI104_RS09210 0feaf51cd185a6c30e523df0a0cfce8c 635 Gene3D G3DSA:3.40.50.300 292 551 2.7E-58 T 28-03-2018 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 SUPERFAMILY SSF54368 3 99 3.01E-36 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 TIGRFAM TIGR00653 GlnA: glutamine synthetase, type I 4 468 3.5E-220 T 28-03-2018 IPR004809 Glutamine synthetase type I GO:0004356|GO:0005737|GO:0009399 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 ProSitePatterns PS00182 Glutamine synthetase class-I adenylation site. 386 398 - T 28-03-2018 IPR001637 Glutamine synthetase class-I, adenylation site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 Pfam PF03951 Glutamine synthetase, beta-Grasp domain 14 95 6.9E-32 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 SUPERFAMILY SSF55931 102 468 1.77E-138 T 28-03-2018 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 Pfam PF00120 Glutamine synthetase, catalytic domain 103 466 1.4E-139 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 ProSitePatterns PS00181 Glutamine synthetase putative ATP-binding region signature. 259 274 - T 28-03-2018 IPR027303 Glutamine synthetase, glycine-rich site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 SMART SM01230 102 379 4.6E-152 T 28-03-2018 IPR008146 Glutamine synthetase, catalytic domain GO:0004356|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 Gene3D G3DSA:3.10.20.70 2 104 3.7E-28 T 28-03-2018 IPR008147 Glutamine synthetase, beta-Grasp domain GO:0004356|GO:0006542|GO:0006807 KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 Gene3D G3DSA:3.30.590.10 105 457 7.8E-124 T 28-03-2018 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain GO:0003824 CI104_RS24530 63b14171aa4c4bbbf2bf0da20986f95c 469 ProSitePatterns PS00180 Glutamine synthetase signature 1. 50 68 - T 28-03-2018 IPR027302 Glutamine synthetase, N-terminal conserved site KEGG: 00220+6.3.1.2|KEGG: 00250+6.3.1.2|KEGG: 00630+6.3.1.2|KEGG: 00910+6.3.1.2|MetaCyc: PWY-381|MetaCyc: PWY-5675|MetaCyc: PWY-6549|MetaCyc: PWY-6963|MetaCyc: PWY-6964|Reactome: R-HSA-210455|Reactome: R-HSA-70614 CI104_RS17395 b9c8ce0b53fd70e57febb65bddbcc050 201 SUPERFAMILY SSF53254 57 190 5.37E-17 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS17395 b9c8ce0b53fd70e57febb65bddbcc050 201 Gene3D G3DSA:3.40.50.1240 48 192 1.2E-15 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS17395 b9c8ce0b53fd70e57febb65bddbcc050 201 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 57 127 8.3E-7 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS13295 864d9b891618fec74794ca82ef45bf11 436 Pfam PF07690 Major Facilitator Superfamily 18 305 8.7E-52 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13295 864d9b891618fec74794ca82ef45bf11 436 Gene3D G3DSA:1.20.1250.20 5 207 3.5E-37 T 28-03-2018 CI104_RS13295 864d9b891618fec74794ca82ef45bf11 436 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 20 423 3.0E-127 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS13295 864d9b891618fec74794ca82ef45bf11 436 Gene3D G3DSA:1.20.1250.20 217 431 5.5E-24 T 28-03-2018 CI104_RS13295 864d9b891618fec74794ca82ef45bf11 436 SUPERFAMILY SSF103473 6 423 8.37E-76 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13295 864d9b891618fec74794ca82ef45bf11 436 PIRSF PIRSF002808 2 424 8.2E-38 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 Pfam PF00072 Response regulator receiver domain 10 120 9.8E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 SMART SM00421 146 203 7.3E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 148 203 7.5E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 163 190 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 SUPERFAMILY SSF52172 6 131 1.42E-24 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 Gene3D G3DSA:1.10.10.10 146 209 1.5E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 SUPERFAMILY SSF46894 134 208 4.08E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 149 163 2.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 179 191 2.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 163 179 2.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 SMART SM00448 7 119 1.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS20725 d42904034179b377a88f52a0dc7b802d 209 Gene3D G3DSA:3.40.50.2300 7 145 8.5E-24 T 28-03-2018 CI104_RS12985 7b3b842567bf760877821bd0f33d80af 349 Pfam PF00107 Zinc-binding dehydrogenase 184 309 2.4E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS12985 7b3b842567bf760877821bd0f33d80af 349 SUPERFAMILY SSF50129 7 183 5.5E-44 T 28-03-2018 IPR011032 GroES-like CI104_RS12985 7b3b842567bf760877821bd0f33d80af 349 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 31 143 7.2E-30 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS12985 7b3b842567bf760877821bd0f33d80af 349 Gene3D G3DSA:3.90.180.10 3 171 1.5E-38 T 28-03-2018 CI104_RS12985 7b3b842567bf760877821bd0f33d80af 349 SUPERFAMILY SSF51735 152 307 4.83E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12985 7b3b842567bf760877821bd0f33d80af 349 Gene3D G3DSA:3.40.50.720 172 294 1.8E-27 T 28-03-2018 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 SMART SM01329 6 355 4.0E-181 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 TIGRFAM TIGR02089 TTC: tartrate dehydrogenase 2 359 3.2E-168 T 28-03-2018 IPR011829 Tartrate dehydrogenase GO:0016616|GO:0051287|GO:0055114 KEGG: 00630+1.1.1.93|KEGG: 00650+1.1.1.83 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 Gene3D G3DSA:3.40.718.10 1 211 6.7E-64 T 28-03-2018 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 Gene3D G3DSA:3.40.718.10 212 359 1.9E-55 T 28-03-2018 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 SUPERFAMILY SSF53659 2 359 2.69E-116 T 28-03-2018 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 244 263 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CI104_RS15055 43bd25b741084c93494cf517b10afb01 359 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 7 355 2.1E-86 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS17965 cffb647b3ae7b5e38f28f28d32b04182 232 Pfam PF00849 RNA pseudouridylate synthase 25 181 3.0E-28 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17965 cffb647b3ae7b5e38f28f28d32b04182 232 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 63 77 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17965 cffb647b3ae7b5e38f28f28d32b04182 232 Gene3D G3DSA:3.30.2350.10 16 232 4.1E-56 T 28-03-2018 CI104_RS17965 cffb647b3ae7b5e38f28f28d32b04182 232 SUPERFAMILY SSF55120 11 228 1.36E-58 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 SUPERFAMILY SSF46785 2 109 2.21E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 6.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 6.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 6.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 Gene3D G3DSA:3.40.190.10 176 263 4.6E-20 T 28-03-2018 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 Gene3D G3DSA:3.40.190.10 87 175 2.0E-17 T 28-03-2018 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 SUPERFAMILY SSF53850 89 291 1.71E-37 T 28-03-2018 CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 Pfam PF03466 LysR substrate binding domain 90 291 9.8E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS02840 a4ac5d26805efdc6b096f3d3a389a881 299 Gene3D G3DSA:1.10.10.10 1 83 9.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10480 d6cfe0abbb054f8517c94fc646613522 397 SUPERFAMILY SSF103473 5 391 3.01E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS10480 d6cfe0abbb054f8517c94fc646613522 397 Gene3D G3DSA:1.20.1250.20 194 392 1.4E-21 T 28-03-2018 CI104_RS10480 d6cfe0abbb054f8517c94fc646613522 397 Gene3D G3DSA:1.20.1250.20 1 191 2.0E-16 T 28-03-2018 CI104_RS10480 d6cfe0abbb054f8517c94fc646613522 397 Pfam PF07690 Major Facilitator Superfamily 12 318 5.6E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 SUPERFAMILY SSF54211 252 342 1.64E-32 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Pfam PF13242 HAD-hyrolase-like 103 145 8.1E-6 T 28-03-2018 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 TIGRFAM TIGR01261 hisB_Nterm: histidinol-phosphatase 3 162 5.3E-82 T 28-03-2018 IPR005954 Histidinol-phosphatase GO:0000105|GO:0004401|GO:0004424|GO:0005737 KEGG: 00340+4.2.1.19+3.1.3.15 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Hamap MF_01022 Histidine biosynthesis bifunctional protein HisB [hisB]. 2 355 51.11 T 28-03-2018 IPR020566 Histidine biosynthesis bifunctional protein HisB GO:0000105|GO:0004401|GO:0004424 KEGG: 00340+4.2.1.19+3.1.3.15 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 4 146 5.7E-24 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Gene3D G3DSA:3.30.230.40 255 355 1.2E-31 T 28-03-2018 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 ProSitePatterns PS00955 Imidazoleglycerol-phosphate dehydratase signature 2. 319 331 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 5 144 2.0E-45 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Hamap MF_00076 Imidazoleglycerol-phosphate dehydratase [hisB]. 167 355 37.728 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 ProSitePatterns PS00954 Imidazoleglycerol-phosphate dehydratase signature 1. 226 239 - T 28-03-2018 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Gene3D G3DSA:3.30.230.40 165 253 6.1E-34 T 28-03-2018 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Pfam PF00475 Imidazoleglycerol-phosphate dehydratase 196 337 6.6E-65 T 28-03-2018 IPR000807 Imidazoleglycerol-phosphate dehydratase GO:0000105|GO:0004424 KEGG: 00340+4.2.1.19 CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 SUPERFAMILY SSF56784 1 158 6.67E-40 T 28-03-2018 IPR023214 HAD-like domain CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 SUPERFAMILY SSF54211 167 251 1.39E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS16360 f886e38069ed9f5934f16f5b740de5d5 355 Gene3D G3DSA:3.40.50.1000 1 164 5.4E-25 T 28-03-2018 IPR023214 HAD-like domain CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Gene3D G3DSA:3.30.70.1430 45 139 1.9E-21 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82866 806 1043 4.32E-44 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82693 46 126 1.46E-20 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Gene3D G3DSA:3.30.70.1430 567 665 1.9E-8 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82714 186 269 9.42E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82866 294 506 1.96E-40 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Pfam PF00873 AcrB/AcrD/AcrF family 6 1037 3.2E-235 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 40 58 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 389 413 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 12 36 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 334 357 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 PRINTS PR00702 Acriflavin resistance protein family signature 361 382 1.2E-22 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 TIGRFAM TIGR00914 2A0601: heavy metal efflux pump, CzcA family 1 1045 0.0 T 28-03-2018 IPR004763 Cation efflux system CzcA/CusA/SilA/NccA/HelA/CnrA GO:0006812|GO:0008324|GO:0016021 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82714 723 807 1.44E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Gene3D G3DSA:3.30.2090.10 723 809 5.5E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Gene3D G3DSA:3.30.2090.10 183 271 6.1E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82693 138 184 9.68E-21 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 SUPERFAMILY SSF82693 271 328 9.68E-21 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Gene3D G3DSA:1.20.1640.10 287 517 3.0E-44 T 28-03-2018 CI104_RS07075 5c3c1f8ec4c03986f5f4e06d6ae0928b 1048 Gene3D G3DSA:1.20.1640.10 825 1047 1.8E-30 T 28-03-2018 CI104_RS12885 99c43b88ec047437ac8b435f6de72a29 220 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 2 213 3.3E-36 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CI104_RS12885 99c43b88ec047437ac8b435f6de72a29 220 Pfam PF01914 MarC family integral membrane protein 5 217 7.6E-69 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 SUPERFAMILY SSF47323 642 899 3.18E-69 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 SUPERFAMILY SSF50677 191 365 3.92E-57 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 SUPERFAMILY SSF46589 884 947 9.42E-16 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 TIGRFAM TIGR00422 valS: valine--tRNA ligase 1 931 0.0 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 SUPERFAMILY SSF52374 364 571 2.94E-136 T 28-03-2018 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 SUPERFAMILY SSF52374 1 192 2.94E-136 T 28-03-2018 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 SUPERFAMILY SSF52374 609 641 2.94E-136 T 28-03-2018 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 14 631 1.7E-231 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 PRINTS PR00986 Valyl-tRNA synthetase signature 469 490 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 PRINTS PR00986 Valyl-tRNA synthetase signature 35 46 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 PRINTS PR00986 Valyl-tRNA synthetase signature 236 253 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 PRINTS PR00986 Valyl-tRNA synthetase signature 500 518 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 PRINTS PR00986 Valyl-tRNA synthetase signature 369 382 1.4E-35 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Hamap MF_02004 Valine--tRNA ligase [valS]. 1 949 16.192 T 28-03-2018 IPR002303 Valine-tRNA ligase GO:0000166|GO:0004832|GO:0005524|GO:0006438 KEGG: 00970+6.1.1.9 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Pfam PF08264 Anticodon-binding domain of tRNA 674 824 5.3E-42 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Gene3D G3DSA:3.40.50.620 2 630 8.0E-135 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Pfam PF10458 Valyl tRNA synthetase tRNA binding arm 886 944 6.3E-16 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Gene3D G3DSA:1.10.287.380 877 946 3.3E-23 T 28-03-2018 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm GO:0000166|GO:0004832|GO:0005524|GO:0005737|GO:0006438 KEGG: 00970+6.1.1.9|Reactome: R-HSA-379716 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 Gene3D G3DSA:1.10.730.10 631 816 3.2E-55 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS21995 e578dd8eb24903daee551986ef9de26d 951 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 363 383 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 TIGRFAM TIGR01311 glycerol_kin: glycerol kinase 5 497 7.0E-231 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 PIRSF PIRSF000538 4 502 6.6E-179 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 136 148 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 SUPERFAMILY SSF53067 256 497 1.35E-87 T 28-03-2018 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 Hamap MF_00186 Glycerol kinase [glpK]. 4 498 60.192 T 28-03-2018 IPR005999 Glycerol kinase GO:0004370|GO:0006072 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261|Reactome: R-HSA-75109 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 Gene3D G3DSA:3.30.420.40 250 502 1.0E-79 T 28-03-2018 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 SUPERFAMILY SSF53067 5 256 5.87E-96 T 28-03-2018 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 Gene3D G3DSA:3.30.420.40 1 249 1.8E-88 T 28-03-2018 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 6 253 6.2E-94 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS24140 228197a9ddf4af902681cba5e511a0be 502 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 262 451 1.9E-61 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS24975 6503704baca6372aadbd1cc64a22beed 93 Gene3D G3DSA:3.10.50.40 1 93 1.9E-30 T 28-03-2018 CI104_RS24975 6503704baca6372aadbd1cc64a22beed 93 SUPERFAMILY SSF54534 5 90 4.51E-29 T 28-03-2018 CI104_RS24975 6503704baca6372aadbd1cc64a22beed 93 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 31 51 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CI104_RS24975 6503704baca6372aadbd1cc64a22beed 93 Pfam PF13616 PPIC-type PPIASE domain 14 90 1.8E-21 T 28-03-2018 CI104_RS10925 ba52257ab7e8137febd016b5888f3725 414 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 413 3.6E-166 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CI104_RS10925 ba52257ab7e8137febd016b5888f3725 414 Gene3D G3DSA:1.20.1250.20 1 404 0.012 T 28-03-2018 CI104_RS10925 ba52257ab7e8137febd016b5888f3725 414 Pfam PF12704 MacB-like periplasmic core domain 27 239 4.5E-16 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS10925 ba52257ab7e8137febd016b5888f3725 414 Pfam PF02687 FtsX-like permease family 302 407 1.2E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS10925 ba52257ab7e8137febd016b5888f3725 414 TIGRFAM TIGR02213 lolE_release: lipoprotein releasing system, transmembrane protein LolE 5 414 1.7E-232 T 28-03-2018 IPR011926 Lipoprotein-releasing system transmembrane protein LolC/E, gammaproteobacteria type GO:0006810|GO:0009276|GO:0016021 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 4 136 7.3E-45 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 TIGRFAM TIGR01455 glmM: phosphoglucosamine mutase 7 443 4.3E-196 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 174 193 5.0E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 95 109 5.0E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 234 249 5.0E-14 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 SUPERFAMILY SSF55957 357 444 1.96E-21 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 96 105 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 SUPERFAMILY SSF53738 156 256 4.32E-30 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 SUPERFAMILY SSF53738 2 181 2.63E-48 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Gene3D G3DSA:3.40.120.10 155 268 2.8E-34 T 28-03-2018 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Gene3D G3DSA:3.40.120.10 3 154 1.1E-47 T 28-03-2018 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Gene3D G3DSA:3.30.310.50 374 445 2.7E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 258 366 4.1E-33 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 157 254 3.6E-20 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 373 442 1.2E-14 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Hamap MF_01554_B Phosphoglucosamine mutase [glmM]. 3 445 47.625 T 28-03-2018 IPR006352 Phosphoglucosamine mutase, bacterial type GO:0000287|GO:0005975|GO:0008966 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 Gene3D G3DSA:3.40.120.10 269 373 1.1E-29 T 28-03-2018 CI104_RS02825 58f27f2e5a65d2e0a9a597276e444794 445 SUPERFAMILY SSF53738 258 365 9.81E-32 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS05975 e237245d8ffbb5a2e28de7f0a1012ec6 320 SMART SM00062 24 239 2.1E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS05975 e237245d8ffbb5a2e28de7f0a1012ec6 320 SUPERFAMILY SSF53850 34 306 2.88E-47 T 28-03-2018 CI104_RS05975 e237245d8ffbb5a2e28de7f0a1012ec6 320 Gene3D G3DSA:3.40.190.10 119 320 7.4E-40 T 28-03-2018 CI104_RS05975 e237245d8ffbb5a2e28de7f0a1012ec6 320 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 24 247 4.0E-27 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CI104_RS05975 e237245d8ffbb5a2e28de7f0a1012ec6 320 Gene3D G3DSA:3.40.190.10 20 118 3.2E-11 T 28-03-2018 CI104_RS05975 e237245d8ffbb5a2e28de7f0a1012ec6 320 TIGRFAM TIGR01729 taurine_ABC_bnd: taurine ABC transporter, periplasmic binding protein 25 320 6.7E-156 T 28-03-2018 IPR010068 Taurine ABC transporter, substrate-binding protein TauA GO:0015734|GO:0042597 CI104_RS05765 b6de20548b407ab154625d8993dae15b 414 SUPERFAMILY SSF53474 46 413 1.33E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS05765 b6de20548b407ab154625d8993dae15b 414 Gene3D G3DSA:3.40.50.1820 154 414 5.6E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS05765 b6de20548b407ab154625d8993dae15b 414 Pfam PF06500 Alpha/beta hydrolase of unknown function (DUF1100) 1 414 2.5E-214 T 28-03-2018 IPR010520 UPF0255 family CI104_RS05765 b6de20548b407ab154625d8993dae15b 414 Hamap MF_01063 Esterase FrsA [frsA]. 1 414 60.832 T 28-03-2018 IPR010520 UPF0255 family CI104_RS05765 b6de20548b407ab154625d8993dae15b 414 Gene3D G3DSA:1.20.1440.110 49 153 4.2E-24 T 28-03-2018 CI104_RS02410 aa4d7909a7d02b15bee46e737628d2e3 320 Pfam PF00294 pfkB family carbohydrate kinase 35 296 7.6E-41 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS02410 aa4d7909a7d02b15bee46e737628d2e3 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 252 265 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS02410 aa4d7909a7d02b15bee46e737628d2e3 320 SUPERFAMILY SSF53613 1 308 6.55E-74 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS02410 aa4d7909a7d02b15bee46e737628d2e3 320 Gene3D G3DSA:3.40.1190.20 2 313 8.4E-58 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 SUPERFAMILY SSF51621 4 417 1.7E-157 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 PIRSF PIRSF001362 1 434 2.1E-229 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 256 434 9.3E-93 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 TIGRFAM TIGR01346 isocit_lyase: isocitrate lyase 8 255 1.0E-122 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 Pfam PF00463 Isocitrate lyase family 8 255 3.1E-62 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 Pfam PF00463 Isocitrate lyase family 256 434 2.5E-50 T 28-03-2018 IPR006254 Isocitrate lyase GO:0004451|GO:0019752 KEGG: 00630+4.1.3.1|MetaCyc: PWY-6969 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 Gene3D G3DSA:3.20.20.60 1 417 3.7E-154 T 28-03-2018 CI104_RS23615 acee83d9eb858e77760d70fa8d7fe6dd 434 ProSitePatterns PS00161 Isocitrate lyase signature. 193 198 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 104 121 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 Gene3D G3DSA:2.60.40.10 31 147 2.0E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 173 226 3.7E-10 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 Gene3D G3DSA:2.60.40.10 151 234 5.8E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 149 1.5E-38 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 SUPERFAMILY SSF49354 30 149 4.19E-40 T 28-03-2018 IPR008962 PapD-like CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 PRINTS PR00969 Pili chaperone signature 131 146 2.8E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 PRINTS PR00969 Pili chaperone signature 166 181 2.8E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 PRINTS PR00969 Pili chaperone signature 31 40 2.8E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 PRINTS PR00969 Pili chaperone signature 105 122 2.8E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 PRINTS PR00969 Pili chaperone signature 76 97 2.8E-36 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20635 bc568ff39d2587788a2b4e0dc7886d2a 234 SUPERFAMILY SSF49584 144 228 1.83E-20 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 280 2.7E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 543 575 1.2E-7 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 Gene3D G3DSA:3.40.50.300 310 596 1.1E-71 T 28-03-2018 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 Gene3D G3DSA:3.40.50.300 9 287 3.2E-66 T 28-03-2018 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 ProSitePatterns PS00211 ABC transporters family signature. 464 478 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 Pfam PF00005 ABC transporter 33 196 1.2E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 Pfam PF00005 ABC transporter 341 490 5.1E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 SUPERFAMILY SSF52540 13 268 2.33E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 SUPERFAMILY SSF52540 313 563 1.09E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 SMART SM00382 41 246 5.0E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08575 f71416607c3d7f957d854791d8a006d3 623 SMART SM00382 349 540 9.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS27270 40a6c2ec199b766ac63e9210e12f3f2e 93 Pfam PF01381 Helix-turn-helix 36 86 4.3E-13 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS27270 40a6c2ec199b766ac63e9210e12f3f2e 93 SUPERFAMILY SSF47413 24 86 6.44E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS27270 40a6c2ec199b766ac63e9210e12f3f2e 93 SMART SM00530 35 90 8.7E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS27270 40a6c2ec199b766ac63e9210e12f3f2e 93 Gene3D G3DSA:1.10.260.40 21 88 3.6E-17 T 28-03-2018 CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 Pfam PF09500 Putative thioesterase (yiiD_Cterm) 174 313 2.6E-48 T 28-03-2018 IPR012660 Thioesterase, putative CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 SUPERFAMILY SSF54637 171 313 2.4E-39 T 28-03-2018 IPR029069 HotDog domain CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 Gene3D G3DSA:3.40.630.30 15 161 2.1E-23 T 28-03-2018 CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 SUPERFAMILY SSF55729 15 162 5.66E-28 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 TIGRFAM TIGR02447 yiiD_Cterm: putative thioesterase domain 181 314 3.9E-47 T 28-03-2018 IPR012660 Thioesterase, putative CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 Pfam PF00583 Acetyltransferase (GNAT) family 43 138 1.2E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS24440 748177afe72d02de9334bff5ed1eb71c 329 Gene3D G3DSA:3.10.129.10 162 316 1.4E-18 T 28-03-2018 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 Hamap MF_01974 Methionine aminopeptidase [map]. 3 251 43.762 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 Gene3D G3DSA:3.90.230.10 1 261 8.0E-89 T 28-03-2018 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 TIGRFAM TIGR00500 met_pdase_I: methionine aminopeptidase, type I 3 250 1.3E-108 T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 Pfam PF00557 Metallopeptidase family M24 12 242 5.2E-54 T 28-03-2018 IPR000994 Peptidase M24 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 ProSitePatterns PS00680 Methionine aminopeptidase subfamily 1 signature. 168 186 - T 28-03-2018 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 GO:0004177|GO:0006508|GO:0008235 MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 SUPERFAMILY SSF55920 3 255 2.09E-93 T 28-03-2018 IPR000994 Peptidase M24 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 92 108 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 162 174 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 193 205 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS05280 1fbb70c9eb49e2dc729f9778e8b4dc76 264 PRINTS PR00599 Methionine aminopeptidase-1 signature 69 82 1.2E-22 T 28-03-2018 IPR001714 Peptidase M24, methionine aminopeptidase MetaCyc: PWY-7799|MetaCyc: PWY-7800 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 SUPERFAMILY SSF47413 2 61 1.89E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 SUPERFAMILY SSF53822 63 337 3.62E-49 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 50 2.2E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 Gene3D G3DSA:3.40.50.2300 178 324 1.4E-29 T 28-03-2018 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 Gene3D G3DSA:3.40.50.2300 58 177 1.6E-26 T 28-03-2018 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 SMART SM00354 3 73 8.0E-29 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 ProSitePatterns PS00356 LacI-type HTH domain signature. 6 24 - T 28-03-2018 CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 324 2.8E-30 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS07015 1688561779448f34ce5d34f649b40c12 338 Gene3D G3DSA:1.10.260.40 4 57 6.4E-19 T 28-03-2018 CI104_RS21495 2ca8fada0e6c990418c05138ea91c0ed 476 Gene3D G3DSA:3.50.50.60 58 452 3.5E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21495 2ca8fada0e6c990418c05138ea91c0ed 476 SUPERFAMILY SSF51905 48 261 1.4E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21495 2ca8fada0e6c990418c05138ea91c0ed 476 SUPERFAMILY SSF51905 401 448 1.4E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21495 2ca8fada0e6c990418c05138ea91c0ed 476 Pfam PF12831 FAD dependent oxidoreductase 60 469 1.0E-102 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 SUPERFAMILY SSF88659 589 663 1.14E-20 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Pfam PF04545 Sigma-70, region 4 600 653 2.3E-18 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Pfam PF13606 Ankyrin repeat 44 71 2.0E-5 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 425 653 2.3E-37 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Pfam PF04542 Sigma-70 region 2 430 497 1.4E-22 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 SMART SM00248 43 72 8.7E-4 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Gene3D G3DSA:1.25.40.20 12 95 1.2E-14 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 PRINTS PR00046 Major sigma-70 factor signature 625 640 2.1E-29 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 PRINTS PR00046 Major sigma-70 factor signature 640 651 2.1E-29 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 PRINTS PR00046 Major sigma-70 factor signature 604 616 2.1E-29 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 PRINTS PR00046 Major sigma-70 factor signature 454 467 2.1E-29 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 PRINTS PR00046 Major sigma-70 factor signature 478 486 2.1E-29 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Gene3D G3DSA:1.10.10.10 499 549 4.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 SUPERFAMILY SSF88659 501 550 2.57E-5 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 454 467 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 SUPERFAMILY SSF48403 14 91 4.51E-14 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 SUPERFAMILY SSF88946 285 338 5.63E-42 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 SUPERFAMILY SSF88946 396 498 5.63E-42 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Gene3D G3DSA:1.10.10.10 594 665 5.8E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 Gene3D G3DSA:1.10.601.10 96 498 5.5E-54 T 28-03-2018 CI104_RS19460 5a11131ab060948e20659280dc2e81c9 679 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 625 651 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS16900 4d50faea775f7b40d3db2885909938c5 278 SUPERFAMILY SSF53474 1 276 5.63E-90 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS16900 4d50faea775f7b40d3db2885909938c5 278 Gene3D G3DSA:3.40.50.1820 1 277 9.4E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS16900 4d50faea775f7b40d3db2885909938c5 278 Pfam PF00756 Putative esterase 21 271 3.2E-72 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CI104_RS16900 4d50faea775f7b40d3db2885909938c5 278 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 2 276 2.6E-119 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 SUPERFAMILY SSF46955 4 126 8.06E-35 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 Gene3D G3DSA:1.10.1660.10 1 58 1.7E-21 T 28-03-2018 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 Pfam PF13411 MerR HTH family regulatory protein 4 69 6.2E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 39 59 2.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 4 15 2.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 15 28 2.8E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 Gene3D G3DSA:1.10.1660.10 59 140 9.2E-20 T 28-03-2018 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 SMART SM00422 3 72 1.5E-29 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26640 7e0b35fc7ad4f9f64f89dd84b54454e4 144 TIGRFAM TIGR02047 CadR-PbrR: Cd(II)/Pb(II)-responsive transcriptional regulator 3 129 1.1E-51 T 28-03-2018 IPR011791 Cd(II)/Pb(II)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0045893|GO:0046872 CI104_RS15250 da55e95eb4e1900bd056760770b3b1d2 220 Gene3D G3DSA:3.60.21.10 6 220 5.3E-33 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS15250 da55e95eb4e1900bd056760770b3b1d2 220 SUPERFAMILY SSF56300 17 219 3.65E-44 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS15250 da55e95eb4e1900bd056760770b3b1d2 220 Pfam PF00149 Calcineurin-like phosphoesterase 18 148 6.2E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS15250 da55e95eb4e1900bd056760770b3b1d2 220 ProSitePatterns PS00125 Serine/threonine specific protein phosphatases signature. 76 81 - T 28-03-2018 IPR006186 Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase GO:0016787 KEGG: 04658+3.1.3.16|KEGG: 04660+3.1.3.16 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 96 253 2.5E-30 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF55424 439 562 1.1E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 440 548 1.1E-29 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 TIGRFAM TIGR02053 MerA: mercury(II) reductase 99 564 1.1E-186 T 28-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 99 421 9.5E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF55008 2 70 3.67E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 236 253 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 472 492 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 271 288 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 537 556 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 109 127 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 13 23 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 144 163 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PRINTS PR00945 Mercuric reductase class II signature 291 306 2.3E-92 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 PIRSF PIRSF000350 1 564 1.7E-266 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 132 142 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Pfam PF00403 Heavy-metal-associated domain 3 62 6.9E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 196 288 1.13E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 100 148 1.13E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 SUPERFAMILY SSF51905 315 460 1.13E-52 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.30.390.30 439 564 3.2E-36 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 307 433 1.9E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.30.70.100 2 68 1.5E-18 T 28-03-2018 CI104_RS28660 c4c9e6c81b6a77e58468908080244164 564 Gene3D G3DSA:3.50.50.60 254 306 5.1E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01975 637c59b17fb2df70014148d5e4033da9 273 Gene3D G3DSA:3.10.50.40 134 250 1.6E-42 T 28-03-2018 CI104_RS01975 637c59b17fb2df70014148d5e4033da9 273 SUPERFAMILY SSF54534 41 249 6.29E-65 T 28-03-2018 CI104_RS01975 637c59b17fb2df70014148d5e4033da9 273 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 33 152 1.6E-35 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CI104_RS01975 637c59b17fb2df70014148d5e4033da9 273 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 160 246 7.4E-28 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CI104_RS01975 637c59b17fb2df70014148d5e4033da9 273 Gene3D G3DSA:1.10.287.460 26 133 3.7E-28 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 SUPERFAMILY SSF46689 191 241 2.44E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 Gene3D G3DSA:1.10.10.60 26 247 3.4E-14 T 28-03-2018 CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 SMART SM00342 207 290 2.5E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 SUPERFAMILY SSF46689 243 292 3.81E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 Gene3D G3DSA:1.10.10.60 248 297 1.7E-12 T 28-03-2018 CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 Pfam PF06719 AraC-type transcriptional regulator N-terminus 29 178 9.3E-37 T 28-03-2018 IPR009594 Transcription regulator HTH, AraC, N-terminal CI104_RS03950 df636c193f3f7fe6bba09e9fb9222ef5 299 Pfam PF12833 Helix-turn-helix domain 213 288 2.5E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS08995 9f35c312dfe683a782a6fe6e3452eab4 282 Pfam PF01380 SIS domain 119 222 8.6E-7 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS08995 9f35c312dfe683a782a6fe6e3452eab4 282 Gene3D G3DSA:1.10.10.10 5 116 3.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08995 9f35c312dfe683a782a6fe6e3452eab4 282 Gene3D G3DSA:3.40.50.10490 117 255 3.5E-9 T 28-03-2018 CI104_RS08995 9f35c312dfe683a782a6fe6e3452eab4 282 SUPERFAMILY SSF53697 89 221 1.76E-14 T 28-03-2018 CI104_RS08995 9f35c312dfe683a782a6fe6e3452eab4 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 7 78 8.7E-15 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS08995 9f35c312dfe683a782a6fe6e3452eab4 282 SUPERFAMILY SSF46689 6 78 2.15E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 SUPERFAMILY SSF53067 4 263 1.75E-60 T 28-03-2018 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 Gene3D G3DSA:3.30.420.40 1 263 8.3E-67 T 28-03-2018 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 Gene3D G3DSA:3.30.420.40 276 545 5.4E-67 T 28-03-2018 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 PIRSF PIRSF000538 2 543 3.2E-75 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 TIGRFAM TIGR01315 5C_CHO_kinase: FGGY-family pentulose kinase 5 538 3.0E-211 T 28-03-2018 IPR006003 FGGY carbohydrate kinase, pentulose kinase GO:0005975|GO:0016773 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 262 3.7E-32 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 SUPERFAMILY SSF53067 279 533 4.96E-55 T 28-03-2018 CI104_RS18670 2414cb1e10f7dd74916f13d583db64ba 545 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 282 488 8.7E-42 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 SUPERFAMILY SSF46689 85 133 2.46E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 SUPERFAMILY SSF53155 187 266 5.89E-21 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Gene3D G3DSA:3.30.160.70 183 264 1.7E-19 T 28-03-2018 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Gene3D G3DSA:1.10.10.10 265 351 7.0E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 SUPERFAMILY SSF57884 2 91 2.09E-32 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 SUPERFAMILY SSF46767 268 349 6.28E-32 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 136 177 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Gene3D G3DSA:1.10.10.60 138 182 0.027 T 28-03-2018 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 86 128 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 189 266 1.5E-15 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Gene3D G3DSA:3.40.10.10 1 77 9.6E-27 T 28-03-2018 IPR035451 Ada-like domain CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 PIRSF PIRSF000409 1 354 1.5E-138 T 28-03-2018 IPR016221 Bifunctional regulatory protein Ada CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Pfam PF02805 Metal binding domain of Ada 11 75 1.2E-30 T 28-03-2018 IPR004026 Ada DNA repair, metal-binding GO:0003677|GO:0006281|GO:0006355|GO:0008168|GO:0008270 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 319 325 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Pfam PF12833 Helix-turn-helix domain 105 182 1.9E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Gene3D G3DSA:1.10.10.60 80 137 4.0E-17 T 28-03-2018 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 270 349 1.6E-33 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 SMART SM00342 99 181 4.3E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS17215 b08873cf3d95bbb8aace9be1a8b3e6c8 354 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 269 348 8.4E-38 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82866 802 1024 7.32E-44 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 47 65 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 552 569 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 PRINTS PR00702 Acriflavin resistance protein family signature 19 43 2.6E-79 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Gene3D G3DSA:3.30.70.1430 49 151 2.8E-24 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Gene3D G3DSA:3.30.2090.10 190 275 9.0E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Gene3D G3DSA:3.30.2090.10 717 804 7.7E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82693 565 661 9.81E-18 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82714 719 800 2.09E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82714 192 275 3.79E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Hamap MF_01423 Multidrug resistance protein MdtB [mdtB]. 1 1037 33.696 T 28-03-2018 IPR022831 Multidrug resistance protein MdtB CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82693 146 191 1.31E-21 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82693 277 333 1.31E-21 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Gene3D G3DSA:1.20.1640.10 815 1036 5.7E-34 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Pfam PF00873 AcrB/AcrD/AcrF family 13 1022 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82866 299 498 1.96E-44 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 SUPERFAMILY SSF82693 49 138 2.04E-23 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Gene3D G3DSA:3.30.70.1430 567 666 9.4E-16 T 28-03-2018 CI104_RS16610 2fa3f3067bae61ee112fc98334ad5777 1040 Gene3D G3DSA:1.20.1640.10 276 501 2.1E-43 T 28-03-2018 CI104_RS14540 626d58a5acc2d3658504142b5beefa46 391 Pfam PF13437 HlyD family secretion protein 177 294 5.2E-5 T 28-03-2018 CI104_RS14540 626d58a5acc2d3658504142b5beefa46 391 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 42 378 1.6E-84 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS14540 626d58a5acc2d3658504142b5beefa46 391 Gene3D G3DSA:2.40.50.100 165 362 1.0E-5 T 28-03-2018 CI104_RS14540 626d58a5acc2d3658504142b5beefa46 391 Pfam PF13533 Biotin-lipoyl like 66 115 5.2E-17 T 28-03-2018 CI104_RS14540 626d58a5acc2d3658504142b5beefa46 391 SUPERFAMILY SSF111369 57 302 4.32E-73 T 28-03-2018 CI104_RS14540 626d58a5acc2d3658504142b5beefa46 391 Gene3D G3DSA:2.40.50.100 66 138 5.6E-21 T 28-03-2018 CI104_RS27735 901d2bae88ee479f6a4bc3a84e816fe0 876 SUPERFAMILY SSF52540 441 768 4.91E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27735 901d2bae88ee479f6a4bc3a84e816fe0 876 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 44 855 6.5E-270 T 28-03-2018 IPR014117 Type-IV secretion system protein TraC CI104_RS27735 901d2bae88ee479f6a4bc3a84e816fe0 876 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 38 276 1.6E-47 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CI104_RS27735 901d2bae88ee479f6a4bc3a84e816fe0 876 Gene3D G3DSA:3.40.50.300 420 792 3.7E-18 T 28-03-2018 CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 TIGRFAM TIGR00361 ComEC_Rec2: DNA internalization-related competence protein ComEC/Rec2 65 718 6.1E-262 T 28-03-2018 IPR004797 Competence protein ComEC/Rec2 GO:0016021|GO:0030420 CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 SMART SM00849 508 689 4.6E-6 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 SUPERFAMILY SSF56281 497 742 7.99E-43 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 TIGRFAM TIGR00360 ComEC_N-term: ComEC/Rec2-related protein 221 404 1.1E-50 T 28-03-2018 IPR004477 ComEC/Rec2-related protein CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 Pfam PF00753 Metallo-beta-lactamase superfamily 505 679 6.8E-15 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 Pfam PF03772 Competence protein 201 467 3.2E-52 T 28-03-2018 IPR004477 ComEC/Rec2-related protein CI104_RS09055 353e72a082f3f415d24964c37b47767c 754 Gene3D G3DSA:3.60.15.10 493 713 1.7E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 SUPERFAMILY SSF46785 4 133 8.85E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 Pfam PF01047 MarR family 29 85 2.3E-12 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 ProSitePatterns PS01117 MarR-type HTH domain signature. 61 95 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 Gene3D G3DSA:1.10.10.10 1 136 9.4E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 82 98 4.2E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 112 132 4.2E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 46 62 4.2E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 PRINTS PR00598 Bacterial regulatory protein MarR family signature 63 78 4.2E-11 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19915 58f12fab36546171318bbafd87f32bdc 138 SMART SM00347 24 122 5.3E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS21635 0f7a2e25d59ee029869c1b55b6369031 449 Pfam PF07690 Major Facilitator Superfamily 22 393 3.2E-60 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS21635 0f7a2e25d59ee029869c1b55b6369031 449 PIRSF PIRSF002808 1 448 1.8E-49 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS21635 0f7a2e25d59ee029869c1b55b6369031 449 Gene3D G3DSA:1.20.1250.20 244 445 2.0E-31 T 28-03-2018 CI104_RS21635 0f7a2e25d59ee029869c1b55b6369031 449 SUPERFAMILY SSF103473 6 436 6.54E-91 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS21635 0f7a2e25d59ee029869c1b55b6369031 449 Gene3D G3DSA:1.20.1250.20 8 209 2.9E-43 T 28-03-2018 CI104_RS05890 502976ed14859072c4119d71e6242693 293 Pfam PF13714 Phosphoenolpyruvate phosphomutase 10 250 5.4E-49 T 28-03-2018 CI104_RS05890 502976ed14859072c4119d71e6242693 293 SUPERFAMILY SSF51621 4 289 7.63E-99 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS05890 502976ed14859072c4119d71e6242693 293 Gene3D G3DSA:3.20.20.60 2 293 2.4E-91 T 28-03-2018 CI104_RS05890 502976ed14859072c4119d71e6242693 293 TIGRFAM TIGR02317 prpB: methylisocitrate lyase 7 291 2.6E-136 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CI104_RS05890 502976ed14859072c4119d71e6242693 293 Hamap MF_01939 2-methylisocitrate lyase [prpB]. 4 292 50.471 T 28-03-2018 IPR012695 2-methylisocitrate lyase GO:0019629|GO:0046421 KEGG: 00640+4.1.3.30|MetaCyc: PWY-5747 CI104_RS05890 502976ed14859072c4119d71e6242693 293 ProSitePatterns PS00161 Isocitrate lyase signature. 121 126 - T 28-03-2018 IPR018523 Isocitrate lyase/phosphorylmutase, conserved site GO:0003824|GO:0008152 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Hamap MF_01588 DNA ligase [ligA]. 2 669 54.949 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 TIGRFAM TIGR00575 dnlj: DNA ligase, NAD-dependent 11 665 1.9E-276 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Pfam PF03119 NAD-dependent DNA ligase C4 zinc finger domain 407 434 2.7E-10 T 28-03-2018 IPR004149 Zinc-finger, NAD-dependent DNA ligase C4-type GO:0003911|GO:0006260|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:1.10.287.610 1 67 2.9E-27 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 ProSitePatterns PS01056 NAD-dependent DNA ligase signature 2. 331 346 - T 28-03-2018 IPR033136 NAD-dependent DNA ligase, conserved site CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:3.30.1490.70 243 321 2.9E-23 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:1.10.150.20 432 505 1.5E-26 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SUPERFAMILY SSF50249 318 400 6.51E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SUPERFAMILY SSF47781 404 583 7.41E-61 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:2.40.50.140 322 390 1.1E-34 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SUPERFAMILY SSF52113 596 669 4.09E-19 T 28-03-2018 IPR001357 BRCT domain CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:3.30.470.30 119 242 1.5E-52 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Pfam PF01653 NAD-dependent DNA ligase adenylation domain 3 318 9.7E-141 T 28-03-2018 IPR013839 NAD-dependent DNA ligase, adenylation GO:0003911 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SMART SM00278 480 499 1.9 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SMART SM00278 446 465 24.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SMART SM00278 512 531 350.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SMART SM00278 544 563 37.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SUPERFAMILY SSF56091 2 316 2.08E-123 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SMART SM00292 595 670 5.5E-14 T 28-03-2018 IPR001357 BRCT domain CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 SMART SM00532 3 448 1.4E-295 T 28-03-2018 IPR013840 NAD-dependent DNA ligase, N-terminal GO:0003911 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Pfam PF03120 NAD-dependent DNA ligase OB-fold domain 322 398 1.2E-35 T 28-03-2018 IPR004150 NAD-dependent DNA ligase, OB-fold GO:0003911|GO:0006260|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:3.40.50.10190 572 670 2.2E-25 T 28-03-2018 IPR001357 BRCT domain CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Pfam PF14520 Helix-hairpin-helix domain 446 502 7.8E-6 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 ProSitePatterns PS01055 NAD-dependent DNA ligase signature 1. 115 144 - T 28-03-2018 IPR018239 NAD-dependent DNA ligase, active site CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Gene3D G3DSA:1.10.150.20 506 571 3.3E-27 T 28-03-2018 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 PIRSF PIRSF001604 1 670 8.1E-256 T 28-03-2018 IPR001679 NAD-dependent DNA ligase GO:0003911|GO:0006260|GO:0006281 CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 596 669 1.5E-13 T 28-03-2018 IPR001357 BRCT domain CI104_RS18105 2eb8e9b80b9cd7bd981294e6a5703982 671 Pfam PF12826 Helix-hairpin-helix motif 510 573 3.5E-22 T 28-03-2018 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 SUPERFAMILY SSF56655 1 259 1.83E-85 T 28-03-2018 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 ProSitePatterns PS00630 Inositol monophosphatase family signature 2. 211 225 - T 28-03-2018 IPR020550 Inositol monophosphatase, conserved site GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 38 58 2.6E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 130 153 2.6E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 60 76 2.6E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 177 198 2.6E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 81 97 2.6E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR00377 Inositol monophosphatase superfamily signature 208 232 2.6E-59 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 Pfam PF00459 Inositol monophosphatase family 2 259 1.1E-73 T 28-03-2018 IPR000760 Inositol monophosphatase-like GO:0046854 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 ProSitePatterns PS00629 Inositol monophosphatase family signature 1. 81 94 - T 28-03-2018 IPR020583 Inositol monophosphatase, metal-binding site CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 Gene3D G3DSA:3.40.190.80 146 267 3.2E-35 T 28-03-2018 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 17 39 3.3E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 156 182 3.3E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 198 210 3.3E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 PRINTS PR01959 SuhB family inositol monophosphatase signature 104 123 3.3E-36 T 28-03-2018 IPR022337 Inositol monophosphatase, SuhB GO:0008934|GO:0046855 KEGG: 00521+3.1.3.25|KEGG: 00562+3.1.3.25|KEGG: 04070+3.1.3.25|MetaCyc: PWY-2301|MetaCyc: PWY-4702|MetaCyc: PWY-6363 CI104_RS18635 12e7f82469674a095a5800ec2b56996d 267 Gene3D G3DSA:3.30.540.10 1 145 1.0E-50 T 28-03-2018 CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 SMART SM00100 2 122 1.1E-26 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF51206 8 136 1.03E-35 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00888 Cyclic nucleotide-binding domain signature 1. 30 46 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:1.10.10.10 145 210 9.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 Pfam PF00325 Bacterial regulatory proteins, crp family 166 197 1.8E-15 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 SUPERFAMILY SSF46785 139 207 3.64E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00889 Cyclic nucleotide-binding domain signature 2. 71 89 - T 28-03-2018 IPR018488 Cyclic nucleotide-binding, conserved site CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 Pfam PF00027 Cyclic nucleotide-binding domain 23 109 6.5E-24 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 ProSitePatterns PS00042 Crp-type HTH domain signature. 168 191 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 Gene3D G3DSA:2.60.120.10 4 144 6.0E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 166 182 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 182 197 8.8E-11 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS01910 c9b73d94c2816acb50d358a803904515 210 SMART SM00419 160 208 4.5E-17 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82714 182 271 1.44E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82866 809 1033 2.22E-44 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Gene3D G3DSA:3.30.70.1430 569 670 9.1E-20 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82866 296 497 1.57E-48 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Gene3D G3DSA:3.30.70.1430 38 140 8.8E-30 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Gene3D G3DSA:1.20.1640.10 827 1033 6.8E-38 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82693 38 132 4.76E-28 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 623 637 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 554 571 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 1.7E-114 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Gene3D G3DSA:3.30.2090.10 180 275 6.4E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82714 725 812 1.29E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Pfam PF00873 AcrB/AcrD/AcrF family 1 1030 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Gene3D G3DSA:1.20.1640.10 287 510 1.1E-44 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82693 135 182 2.79E-28 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82693 274 330 2.79E-28 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 Gene3D G3DSA:3.30.70.1440 674 771 1.2E-19 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 SUPERFAMILY SSF82693 567 671 8.37E-32 T 28-03-2018 CI104_RS06575 a1c66428a34f9bf2fa66b1f4223b3dd7 1049 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1049 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 Hamap MF_00600 60 kDa chaperonin [groL]. 2 547 41.484 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 SUPERFAMILY SSF48592 406 521 3.51E-77 T 28-03-2018 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 SUPERFAMILY SSF48592 7 134 3.51E-77 T 28-03-2018 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 Pfam PF00118 TCP-1/cpn60 chaperonin family 23 523 7.4E-95 T 28-03-2018 IPR002423 Chaperonin Cpn60/TCP-1 family GO:0005524 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 TIGRFAM TIGR02348 GroEL: chaperonin GroL 3 526 5.7E-257 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 SUPERFAMILY SSF54849 137 203 1.42E-24 T 28-03-2018 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 SUPERFAMILY SSF52029 185 376 2.27E-83 T 28-03-2018 IPR027409 GroEL-like apical domain CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 Gene3D G3DSA:1.10.560.10 1 184 1.2E-43 T 28-03-2018 IPR027413 GroEL-like equatorial domain CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 PRINTS PR00298 60kDa chaperonin signature 83 110 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 PRINTS PR00298 60kDa chaperonin signature 350 375 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 PRINTS PR00298 60kDa chaperonin signature 27 53 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 PRINTS PR00298 60kDa chaperonin signature 398 419 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 PRINTS PR00298 60kDa chaperonin signature 268 291 2.5E-74 T 28-03-2018 IPR001844 Chaperonin Cpn60 GO:0005737|GO:0042026 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 Gene3D G3DSA:1.10.560.10 374 516 9.6E-24 T 28-03-2018 IPR027413 GroEL-like equatorial domain CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 Gene3D G3DSA:3.50.7.10 185 373 8.9E-98 T 28-03-2018 IPR027409 GroEL-like apical domain CI104_RS22685 d75fc218ba7e8b7da0b4b69c674dd082 548 ProSitePatterns PS00296 Chaperonins cpn60 signature. 405 416 - T 28-03-2018 IPR018370 Chaperonin Cpn60, conserved site GO:0005524|GO:0005737|GO:0006457 Reactome: R-HSA-1268020|Reactome: R-HSA-8869496 CI104_RS20990 61cccceb0e5bd64a05ebac2ef0c80dd9 181 TIGRFAM TIGR02150 IPP_isom_1: isopentenyl-diphosphate delta-isomerase 6 165 2.2E-46 T 28-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CI104_RS20990 61cccceb0e5bd64a05ebac2ef0c80dd9 181 Hamap MF_00202 Isopentenyl-diphosphate Delta-isomerase [idi]. 4 177 32.424 T 28-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CI104_RS20990 61cccceb0e5bd64a05ebac2ef0c80dd9 181 SUPERFAMILY SSF55811 4 168 4.87E-48 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS20990 61cccceb0e5bd64a05ebac2ef0c80dd9 181 Pfam PF00293 NUDIX domain 31 149 1.1E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS20990 61cccceb0e5bd64a05ebac2ef0c80dd9 181 Gene3D G3DSA:3.90.79.10 31 181 4.7E-26 T 28-03-2018 CI104_RS20990 61cccceb0e5bd64a05ebac2ef0c80dd9 181 PIRSF PIRSF018427 1 180 1.4E-54 T 28-03-2018 IPR011876 Isopentenyl-diphosphate delta-isomerase, type 1 GO:0004452|GO:0008299 KEGG: 00900+5.3.3.2|MetaCyc: PWY-5123|MetaCyc: PWY-6174|MetaCyc: PWY-6383|MetaCyc: PWY-6859|MetaCyc: PWY-7102|MetaCyc: PWY-7391|MetaCyc: PWY-7524|MetaCyc: PWY-7560|MetaCyc: PWY-922|Reactome: R-HSA-191273 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 180 211 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 Pfam PF13378 Enolase C-terminal domain-like 135 355 7.4E-55 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 82 107 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 Gene3D G3DSA:3.30.390.10 347 382 0.0096 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 Gene3D G3DSA:3.20.20.120 98 346 7.6E-68 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 SUPERFAMILY SSF51604 95 357 1.22E-72 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 15 107 7.9E-31 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 Gene3D G3DSA:3.30.390.10 1 97 7.0E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 Hamap MF_01289 D-galactonate dehydratase [dgoD]. 1 382 76.664 T 28-03-2018 IPR023592 D-galactonate dehydratase GO:0008869|GO:0034194 KEGG: 00052+4.2.1.6 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 SUPERFAMILY SSF54826 1 112 3.21E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00045 7ba6ae85029337a8be4ba212357c233c 382 SMART SM00922 125 230 4.4E-18 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 ProSitePatterns PS01131 Ribosomal RNA adenine dimethylases signature. 41 68 - T 28-03-2018 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site GO:0000154|GO:0000179|GO:0008649 CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 SUPERFAMILY SSF53335 17 266 3.01E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 Pfam PF00398 Ribosomal RNA adenine dimethylase 9 265 1.1E-86 T 28-03-2018 IPR001737 Ribosomal RNA adenine methyltransferase KsgA/Erm CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 SMART SM00650 25 198 9.3E-83 T 28-03-2018 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal GO:0000154|GO:0000179|GO:0008649 CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 TIGRFAM TIGR00755 ksgA: ribosomal RNA small subunit methyltransferase A 11 264 8.7E-90 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 Gene3D G3DSA:3.40.50.150 2 204 8.0E-51 T 28-03-2018 CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 Hamap MF_00607 Ribosomal RNA small subunit methyltransferase A [rsmA]. 9 265 54.781 T 28-03-2018 IPR011530 Ribosomal RNA adenine dimethylase GO:0000179|GO:0006364 CI104_RS04720 cce2a8545f9b87ce1e058b7e32592679 273 Gene3D G3DSA:1.10.8.100 205 264 3.7E-19 T 28-03-2018 IPR023165 rRNA adenine dimethylase-like Reactome: R-HSA-2151201|Reactome: R-HSA-6793080 CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 Gene3D G3DSA:1.10.10.60 2 60 1.4E-10 T 28-03-2018 CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 Gene3D G3DSA:1.10.357.10 61 197 4.7E-17 T 28-03-2018 CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 SUPERFAMILY SSF48498 83 193 2.83E-7 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 Pfam PF00440 Bacterial regulatory proteins, tetR family 20 61 5.1E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 Hamap MF_01839 Nucleoid occlusion factor SlmA [slmA]. 1 198 40.896 T 28-03-2018 IPR023769 Nucleoid occlusion factor SlmA GO:0010974 CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 SUPERFAMILY SSF46689 5 86 4.14E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS00500 0f02f8517a36b2518a670ef8a07a6711 198 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.3E-50 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 SMART SM01134 73 233 2.0E-67 T 28-03-2018 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 SUPERFAMILY SSF46785 5 69 6.52E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 Gene3D G3DSA:3.40.50.1360 66 232 3.9E-34 T 28-03-2018 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 SMART SM00420 6 58 2.6E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 Gene3D G3DSA:1.10.10.10 3 64 6.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19200 bc86685c971832e3432abfa87a1edcba 253 SUPERFAMILY SSF100950 75 233 3.24E-28 T 28-03-2018 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.7E-7 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 Pfam PF00455 DeoR C terminal sensor domain 75 232 2.3E-50 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 SMART SM01134 73 233 2.0E-67 T 28-03-2018 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 SUPERFAMILY SSF46785 5 69 6.52E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.1E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 Gene3D G3DSA:3.40.50.1360 66 232 3.9E-34 T 28-03-2018 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 SMART SM00420 6 58 2.6E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 Gene3D G3DSA:1.10.10.10 3 64 6.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26895 bc86685c971832e3432abfa87a1edcba 253 SUPERFAMILY SSF100950 75 233 3.24E-28 T 28-03-2018 CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 Pfam PF00177 Ribosomal protein S7p/S5e 1 149 2.3E-64 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 ProSitePatterns PS00052 Ribosomal protein S7 signature. 20 46 - T 28-03-2018 IPR020606 Ribosomal protein S7, conserved site GO:0003723|GO:0003735|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 Hamap MF_00480_B 30S ribosomal protein S7 [rpsG]. 1 156 35.203 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 TIGRFAM TIGR01029 rpsG_bact: ribosomal protein uS7 3 156 4.5E-71 T 28-03-2018 IPR005717 Ribosomal protein S7, bacterial/organellar-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 Gene3D G3DSA:1.10.455.10 6 156 7.9E-61 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 PIRSF PIRSF002122 3 156 6.8E-63 T 28-03-2018 IPR000235 Ribosomal protein S5/S7 GO:0006412 CI104_RS02005 07946724f0f81b26c702851b81e533a0 156 SUPERFAMILY SSF47973 6 149 1.26E-59 T 28-03-2018 IPR023798 Ribosomal protein S7 domain CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 9.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 62 73 9.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 52 62 9.1E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 Gene3D G3DSA:3.40.190.10 197 286 3.1E-7 T 28-03-2018 CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 SUPERFAMILY SSF53850 107 313 2.71E-37 T 28-03-2018 CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 SUPERFAMILY SSF46785 21 100 1.09E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 Pfam PF03466 LysR substrate binding domain 136 314 2.3E-16 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 Gene3D G3DSA:3.40.190.10 110 196 2.0E-8 T 28-03-2018 CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 Gene3D G3DSA:1.10.10.10 20 101 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04835 87a4a8c46c168cd4749eb9de3f7c1fc5 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 26 83 1.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04065 ed538272aa087bafe9a6e4df10ca86ed 619 Pfam PF05257 CHAP domain 52 149 9.4E-12 T 28-03-2018 IPR007921 CHAP domain CI104_RS04065 ed538272aa087bafe9a6e4df10ca86ed 619 SUPERFAMILY SSF56059 497 614 3.53E-73 T 28-03-2018 CI104_RS04065 ed538272aa087bafe9a6e4df10ca86ed 619 SUPERFAMILY SSF56059 224 379 3.53E-73 T 28-03-2018 CI104_RS04065 ed538272aa087bafe9a6e4df10ca86ed 619 SUPERFAMILY SSF52440 380 510 8.63E-39 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS04065 ed538272aa087bafe9a6e4df10ca86ed 619 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 251 615 2.0E-65 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CI104_RS04065 ed538272aa087bafe9a6e4df10ca86ed 619 SUPERFAMILY SSF54001 10 196 9.42E-60 T 28-03-2018 CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 Gene3D G3DSA:2.160.20.20 189 570 6.4E-27 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 189 234 2.4E-6 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 454 929 4.0E-95 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 SMART SM00869 650 918 1.3E-37 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 Gene3D G3DSA:2.40.128.130 608 929 1.9E-42 T 28-03-2018 CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 SUPERFAMILY SSF51126 72 567 5.65E-22 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 SUPERFAMILY SSF103515 616 929 1.44E-44 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 Pfam PF03797 Autotransporter beta-domain 653 907 1.2E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS12940 47c39c340f74aa13a12b539564a632aa 929 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 375 401 1.9E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 SUPERFAMILY SSF51735 6 166 5.09E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 7.0E-35 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 Gene3D G3DSA:3.40.50.720 1 167 2.3E-27 T 28-03-2018 CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 SUPERFAMILY SSF48179 168 292 3.4E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 PIRSF PIRSF000103 1 294 7.8E-59 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 Gene3D G3DSA:1.10.1040.10 168 294 2.6E-36 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS19190 da6e047a88e127a767fdaab1c08a5d3d 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 2.1E-36 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 SUPERFAMILY SSF51735 6 166 5.09E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 289 7.0E-35 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 Gene3D G3DSA:3.40.50.720 1 167 2.3E-27 T 28-03-2018 CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 SUPERFAMILY SSF48179 168 292 3.4E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 PIRSF PIRSF000103 1 294 7.8E-59 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 Gene3D G3DSA:1.10.1040.10 168 294 2.6E-36 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS26905 da6e047a88e127a767fdaab1c08a5d3d 300 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 6 164 2.1E-36 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 Pfam PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region 157 276 9.2E-43 T 28-03-2018 IPR013171 Cytidine/deoxycytidylate deaminase, zinc-binding domain GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 Gene3D G3DSA:3.40.140.10 28 171 4.5E-27 T 28-03-2018 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 SUPERFAMILY SSF53927 1 148 5.2E-40 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 102 136 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 Gene3D G3DSA:3.40.140.10 180 294 1.1E-16 T 28-03-2018 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 TIGRFAM TIGR01355 cyt_deam_dimer: cytidine deaminase 31 284 1.8E-83 T 28-03-2018 IPR006263 Cytidine deaminase, homodimeric GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 59 139 2.3E-11 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 PIRSF PIRSF006334 14 293 1.4E-103 T 28-03-2018 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 SUPERFAMILY SSF53927 152 293 2.68E-43 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS16845 24415d937856dd088fd1bf75ec159d57 294 Hamap MF_01558 Cytidine deaminase [cdd]. 1 292 49.275 T 28-03-2018 IPR020797 Cytidine deaminase, bacteria GO:0004126|GO:0008270|GO:0009972 KEGG: 00240+3.5.4.5|KEGG: 00983+3.5.4.5|MetaCyc: PWY-6556|MetaCyc: PWY-7181|MetaCyc: PWY-7193|MetaCyc: PWY-7199 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 Gene3D G3DSA:2.70.98.40 1 246 6.3E-57 T 28-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 Pfam PF03632 Glycosyl hydrolase family 65 central catalytic domain 301 680 9.6E-147 T 28-03-2018 IPR005195 Glycoside hydrolase, family 65, central catalytic GO:0003824|GO:0005975 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 Pfam PF03636 Glycosyl hydrolase family 65, N-terminal domain 9 240 2.7E-51 T 28-03-2018 IPR005196 Glycoside hydrolase, family 65, N-terminal GO:0003824|GO:0005975 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 PIRSF PIRSF036289 1 742 9.0E-223 T 28-03-2018 IPR017045 Maltose phosphorylase/glycosyl hydrolase/vacuolar acid trehalase CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 SUPERFAMILY SSF74650 6 241 1.1E-51 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 Gene3D G3DSA:1.50.10.10 295 665 7.6E-103 T 28-03-2018 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 SUPERFAMILY SSF48208 255 720 1.11E-105 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 Pfam PF03633 Glycosyl hydrolase family 65, C-terminal domain 684 732 1.2E-12 T 28-03-2018 IPR005194 Glycoside hydrolase family 65, C-terminal CI104_RS13935 9cd973c500622b36720c3a5383a6f9ab 758 Gene3D G3DSA:2.60.420.10 666 734 4.0E-15 T 28-03-2018 CI104_RS04555 d869184b80a090a45052683cc6edaf57 149 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 141 1.3E-14 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CI104_RS04555 d869184b80a090a45052683cc6edaf57 149 Gene3D G3DSA:3.10.50.40 2 149 1.2E-20 T 28-03-2018 CI104_RS04555 d869184b80a090a45052683cc6edaf57 149 SUPERFAMILY SSF54534 5 143 1.65E-35 T 28-03-2018 CI104_RS26115 7b56d3bc29e0ae08184e82d8bcb0f18f 144 SUPERFAMILY SSF51306 17 134 7.85E-29 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS26115 7b56d3bc29e0ae08184e82d8bcb0f18f 144 Gene3D G3DSA:2.10.109.10 22 138 3.6E-21 T 28-03-2018 CI104_RS26115 7b56d3bc29e0ae08184e82d8bcb0f18f 144 Pfam PF00717 Peptidase S24-like 58 122 4.4E-10 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS26115 7b56d3bc29e0ae08184e82d8bcb0f18f 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 53 63 1.8E-6 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS26115 7b56d3bc29e0ae08184e82d8bcb0f18f 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 64 75 1.8E-6 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS26115 7b56d3bc29e0ae08184e82d8bcb0f18f 144 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 92 104 1.8E-6 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 675 702 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 459 476 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 SUPERFAMILY SSF53706 14 634 1.14E-159 T 28-03-2018 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Pfam PF01568 Molydopterin dinucleotide binding domain 636 740 3.6E-25 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 SUPERFAMILY SSF50692 630 774 1.18E-38 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Gene3D G3DSA:3.90.55.10 492 567 3.8E-18 T 28-03-2018 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Gene3D G3DSA:3.90.55.10 7 93 7.6E-12 T 28-03-2018 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Gene3D G3DSA:3.40.228.10 151 405 3.5E-58 T 28-03-2018 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Pfam PF00384 Molybdopterin oxidoreductase 56 517 1.7E-108 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 TIGRFAM TIGR00509 bisC_fam: molybdopterin guanine dinucleotide-containing S/N-oxide reductases 13 775 0.0 T 28-03-2018 IPR006658 Molybdopterin guanine dinucleotide-containing S/N-oxide reductase GO:0016491|GO:0055114 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Gene3D G3DSA:3.40.228.10 409 491 3.3E-6 T 28-03-2018 CI104_RS00925 4e96221f361c4b8170de2809973bf01b 777 Gene3D G3DSA:2.40.40.20 612 771 4.3E-30 T 28-03-2018 CI104_RS11600 1ea672b924e39ba49687ce05e050e5f6 427 Hamap MF_01232 UPF0229 protein YeaH [yeaH]. 1 423 42.473 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 CI104_RS11600 1ea672b924e39ba49687ce05e050e5f6 427 Pfam PF04285 Protein of unknown function (DUF444) 4 421 2.3E-186 T 28-03-2018 IPR006698 Uncharacterised protein family UPF0229 CI104_RS04675 0ed40c64d239301b410b19a998ed7d5f 95 Pfam PF05187 Electron transfer flavoprotein-ubiquinone oxidoreductase, 4Fe-4S 36 91 9.6E-5 T 28-03-2018 CI104_RS04675 0ed40c64d239301b410b19a998ed7d5f 95 SUPERFAMILY SSF54862 40 90 3.14E-8 T 28-03-2018 CI104_RS04675 0ed40c64d239301b410b19a998ed7d5f 95 PIRSF PIRSF036548 1 95 2.2E-37 T 28-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 CI104_RS04675 0ed40c64d239301b410b19a998ed7d5f 95 Gene3D G3DSA:3.30.70.20 39 71 4.3E-5 T 28-03-2018 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 4 28 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 314 329 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 190 205 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 624 637 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 352 369 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 395 414 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01411 Cytochrome c-type biogenesis protein CcmF signature 113 136 4.9E-60 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 80 106 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 275 295 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 160 182 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 245 265 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 295 311 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 211 237 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 132 149 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 311 330 2.9E-96 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 316 630 8.4E-124 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 Pfam PF01578 Cytochrome C assembly protein 89 296 4.9E-54 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CI104_RS17120 01e58661d4b6cb6e8788435ff4c7dacc 647 TIGRFAM TIGR00353 nrfE: cytochrome c-type biogenesis protein CcmF 53 634 2.9E-296 T 28-03-2018 IPR003568 Cytochrome c-type biogenesis protein CcmF GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS10875 dc6a5f5a73be76902ebfefd2a8560270 178 SUPERFAMILY SSF88874 15 177 5.89E-31 T 28-03-2018 CI104_RS10875 dc6a5f5a73be76902ebfefd2a8560270 178 Gene3D G3DSA:4.10.1070.10 71 170 7.1E-24 T 28-03-2018 CI104_RS10875 dc6a5f5a73be76902ebfefd2a8560270 178 Gene3D G3DSA:3.90.1340.10 8 70 7.5E-8 T 28-03-2018 IPR011083 Phage tail collar domain CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 Pfam PF13419 Haloacid dehalogenase-like hydrolase 51 184 2.2E-12 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 33 184 7.4E-20 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 Gene3D G3DSA:3.40.50.1000 79 194 1.6E-22 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 Gene3D G3DSA:1.10.150.240 18 78 1.9E-19 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 146 166 6.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 128 144 6.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 96 109 6.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 173 186 6.3E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS24455 a952d5b94840f5a820530f15bad38463 199 SUPERFAMILY SSF56784 3 193 6.46E-44 T 28-03-2018 IPR023214 HAD-like domain CI104_RS00235 c117488bef720c9d73071d07a3c482e7 119 PIRSF PIRSF018634 1 117 3.3E-49 T 28-03-2018 IPR009387 Toxin HigB-2 CI104_RS00235 c117488bef720c9d73071d07a3c482e7 119 Pfam PF06296 RelE toxin of RelE / RelB toxin-antitoxin system 1 113 1.4E-41 T 28-03-2018 IPR009387 Toxin HigB-2 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 ProSitePatterns PS00099 Thiolases active site. 368 381 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 Gene3D G3DSA:3.40.47.10 1 256 5.8E-55 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 SUPERFAMILY SSF53901 262 386 7.11E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 Pfam PF02803 Thiolase, C-terminal domain 261 386 1.4E-49 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 385 1.6E-144 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 PIRSF PIRSF000429 1 387 4.2E-131 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 TIGRFAM TIGR02445 fadA: acetyl-CoA C-acyltransferase FadA 3 387 6.5E-241 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 Gene3D G3DSA:3.40.47.10 257 384 6.2E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 ProSitePatterns PS00737 Thiolases signature 2. 333 349 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 Hamap MF_01620 3-ketoacyl-CoA thiolase [fadA]. 1 387 62.043 T 28-03-2018 IPR012805 Acetyl-CoA C-acyltransferase FadA GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 87 105 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 SUPERFAMILY SSF53901 1 259 2.03E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS24655 d952ea6bde70bc0837123bfcb7abfcc1 387 Pfam PF00108 Thiolase, N-terminal domain 4 253 7.9E-86 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 Gene3D G3DSA:3.60.90.10 32 189 6.7E-45 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 Pfam PF02675 S-adenosylmethionine decarboxylase 33 169 2.3E-30 T 28-03-2018 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 Hamap MF_00465 S-adenosylmethionine decarboxylase proenzyme [speD]. 1 264 174.831 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 TIGRFAM TIGR03331 SAM_DCase_Eco: S-adenosylmethionine decarboxylase proenzyme 3 261 4.6E-148 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 SUPERFAMILY SSF56276 112 173 5.1E-23 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 SUPERFAMILY SSF56276 41 84 5.1E-23 T 28-03-2018 IPR016067 S-adenosylmethionine decarboxylase, core GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834|Reactome: R-HSA-351202 CI104_RS05070 de83fb7fff901c5b09d0a273cb74a44c 264 PIRSF PIRSF001356 1 263 3.3E-155 T 28-03-2018 IPR009165 S-adenosylmethionine decarboxylase, bacterial GO:0004014|GO:0008295 KEGG: 00270+4.1.1.50|KEGG: 00330+4.1.1.50|MetaCyc: PWY-6834 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 SMART SM01008 186 298 2.1E-34 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 SUPERFAMILY SSF47741 84 188 3.53E-15 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Gene3D G3DSA:3.30.365.10 796 956 6.8E-44 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Pfam PF01799 [2Fe-2S] binding domain 73 144 6.5E-8 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 SUPERFAMILY SSF56003 354 955 6.67E-169 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 SUPERFAMILY SSF56003 301 318 6.67E-169 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 PIRSF PIRSF000127 51 145 0.19 T 28-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 PIRSF PIRSF000127 355 947 8.2E-70 T 28-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 PIRSF PIRSF000127 140 344 3.9E-16 T 28-03-2018 IPR016208 Aldehyde oxidase/xanthine dehydrogenase GO:0005506|GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Gene3D G3DSA:1.10.150.120 73 179 6.7E-12 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 355 893 6.4E-151 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Gene3D G3DSA:3.30.365.10 470 638 4.1E-37 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Gene3D G3DSA:3.30.365.10 646 795 1.9E-35 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Gene3D G3DSA:3.30.365.10 364 469 1.4E-31 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 187 297 3.0E-29 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 SUPERFAMILY SSF54665 165 317 1.96E-44 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 TIGRFAM TIGR03313 Se_sel_red_Mo: probable selenate reductase, molybdenum-binding subunit 5 955 0.0 T 28-03-2018 IPR017699 Molybdenum-binding protein YgfN/XdhD CI104_RS20960 7038af0ab426ac0ee5c55b619fa14423 956 Gene3D G3DSA:3.90.1170.50 180 299 5.7E-26 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS22760 bad0b62a26b666fbb309f27df24657b2 174 Gene3D G3DSA:2.60.40.1090 26 174 7.5E-29 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22760 bad0b62a26b666fbb309f27df24657b2 174 SUPERFAMILY SSF49401 27 173 4.14E-31 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22760 bad0b62a26b666fbb309f27df24657b2 174 Pfam PF00419 Fimbrial protein 29 173 6.3E-14 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Gene3D G3DSA:3.30.43.10 1 104 2.5E-11 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Gene3D G3DSA:3.30.1370.20 435 518 8.7E-43 T 28-03-2018 IPR016173 D-lactate dehydrogenase, C-terminal subdomain 2 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Pfam PF09330 D-lactate dehydrogenase, membrane binding 278 567 4.8E-146 T 28-03-2018 IPR015409 D-lactate dehydrogenase, membrane binding, C-terminal GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 SUPERFAMILY SSF55103 275 567 1.37E-116 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Pfam PF01565 FAD binding domain 47 166 1.6E-7 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 PIRSF PIRSF000101 4 569 5.3E-305 T 28-03-2018 IPR012256 D-lactate dehydrogenase GO:0004457|GO:0005887|GO:0006089|GO:0050660|GO:0051287 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Gene3D G3DSA:3.30.465.10 107 268 9.3E-79 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Gene3D G3DSA:3.30.70.610 269 348 9.2E-21 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 Gene3D G3DSA:3.30.70.610 349 434 2.6E-29 T 28-03-2018 IPR016172 D-lactate dehydrogenase, C-terminal subdomain 1 GO:0006089|GO:0050660|GO:0055085 KEGG: 00620+1.1.1.28|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CI104_RS16765 db5bc8da8c67d215e60e7a9cf87f42bf 573 SUPERFAMILY SSF56176 10 271 5.61E-73 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS15000 20038c17649e19499006ed5228db11d1 148 TIGRFAM TIGR00689 rpiB_lacA_lacB: sugar-phosphate isomerase, RpiB/LacA/LacB family 3 146 3.2E-46 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS15000 20038c17649e19499006ed5228db11d1 148 PIRSF PIRSF005384 1 148 4.2E-52 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS15000 20038c17649e19499006ed5228db11d1 148 Pfam PF02502 Ribose/Galactose Isomerase 3 141 1.2E-48 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS15000 20038c17649e19499006ed5228db11d1 148 TIGRFAM TIGR01120 rpiB: ribose 5-phosphate isomerase B 2 142 1.9E-43 T 28-03-2018 IPR004785 Ribose 5-phosphate isomerase B GO:0004751|GO:0006098 CI104_RS15000 20038c17649e19499006ed5228db11d1 148 SUPERFAMILY SSF89623 1 146 1.44E-49 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS15000 20038c17649e19499006ed5228db11d1 148 Gene3D G3DSA:3.40.1400.10 1 148 5.4E-54 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 Gene3D G3DSA:1.10.10.60 58 108 1.2E-12 T 28-03-2018 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 SUPERFAMILY SSF46689 58 107 3.36E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 Pfam PF12833 Helix-turn-helix domain 28 106 1.4E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 Gene3D G3DSA:1.10.10.60 1 57 1.4E-12 T 28-03-2018 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 55 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 SMART SM00342 21 104 3.9E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.6E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS14545 dded431b91ef41ba481ca87a673a91c3 112 SUPERFAMILY SSF46689 5 55 1.61E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS00900 c168748d0ebd5bc0a9275ab756ef56a9 426 PIRSF PIRSF002808 1 424 4.6E-35 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS00900 c168748d0ebd5bc0a9275ab756ef56a9 426 Pfam PF07690 Major Facilitator Superfamily 18 258 7.7E-42 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00900 c168748d0ebd5bc0a9275ab756ef56a9 426 Pfam PF07690 Major Facilitator Superfamily 269 416 7.3E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00900 c168748d0ebd5bc0a9275ab756ef56a9 426 Gene3D G3DSA:1.20.1250.20 221 419 3.6E-33 T 28-03-2018 CI104_RS00900 c168748d0ebd5bc0a9275ab756ef56a9 426 Gene3D G3DSA:1.20.1250.20 6 207 4.2E-32 T 28-03-2018 CI104_RS00900 c168748d0ebd5bc0a9275ab756ef56a9 426 SUPERFAMILY SSF103473 8 414 4.71E-82 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12145 1d1e1e5478728e79bfb2d06efc355371 423 SUPERFAMILY SSF101960 11 420 6.41E-111 T 28-03-2018 CI104_RS12145 1d1e1e5478728e79bfb2d06efc355371 423 TIGRFAM TIGR01981 sufD: FeS assembly protein SufD 133 409 7.2E-87 T 28-03-2018 IPR011542 SUF system FeS cluster assembly, SufD GO:0016226 CI104_RS12145 1d1e1e5478728e79bfb2d06efc355371 423 Pfam PF01458 Uncharacterized protein family (UPF0051) 170 393 2.2E-69 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 SUPERFAMILY SSF53955 51 265 1.38E-81 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 Gene3D G3DSA:1.10.3810.10 55 254 1.4E-84 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 Pfam PF00905 Penicillin binding protein transpeptidase domain 437 613 2.7E-24 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 Gene3D G3DSA:2.40.50.140 356 418 4.9E-22 T 28-03-2018 CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 TIGRFAM TIGR02074 PBP_1a_fam: penicillin-binding protein, 1A family 73 791 3.3E-173 T 28-03-2018 CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 SUPERFAMILY SSF56601 430 618 3.95E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 SUPERFAMILY SSF56601 680 839 3.95E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 SUPERFAMILY SSF56601 219 241 3.95E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 SUPERFAMILY SSF56601 270 321 3.95E-110 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 Gene3D G3DSA:3.40.710.10 419 807 4.2E-92 T 28-03-2018 CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 Pfam PF17092 Penicillin-binding protein OB-like domain 324 433 8.9E-30 T 28-03-2018 IPR031376 Penicillin-binding protein, OB-like domain CI104_RS01760 6f9d95da14a900a2277ff86b425b2d28 858 Pfam PF00912 Transglycosylase 63 237 7.0E-65 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 SUPERFAMILY SSF52540 5 228 4.93E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 SMART SM00382 32 266 8.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 SMART SM00382 354 535 8.9E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 Gene3D G3DSA:3.40.50.300 2 279 9.8E-52 T 28-03-2018 CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 Gene3D G3DSA:3.40.50.300 326 563 1.0E-59 T 28-03-2018 CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 SUPERFAMILY SSF52540 324 549 9.35E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 Pfam PF00005 ABC transporter 26 165 2.2E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08365 ab133afddafc704fc43c86cbc1e50d3b 578 Pfam PF00005 ABC transporter 346 489 2.4E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 SMART SM00388 129 194 2.5E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 Gene3D G3DSA:3.30.565.10 193 349 1.3E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 234 347 2.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 Gene3D G3DSA:3.30.450.20 9 108 1.1E-10 T 28-03-2018 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 Pfam PF00989 PAS fold 11 98 2.4E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 310 328 1.7E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 281 295 1.7E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 PRINTS PR00344 Bacterial sensor protein C-terminal signature 333 346 1.7E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 SUPERFAMILY SSF55874 198 346 8.91E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 Gene3D G3DSA:1.10.287.130 118 187 2.0E-13 T 28-03-2018 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 SUPERFAMILY SSF55785 11 105 1.93E-6 T 28-03-2018 IPR000014 PAS domain CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 Pfam PF00512 His Kinase A (phospho-acceptor) domain 131 186 7.6E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 SMART SM00091 7 75 1.6E-7 T 28-03-2018 IPR000014 PAS domain CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 SMART SM00387 233 349 4.7E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24535 50c98ce5a9bf0f3b51eea1eba16609b1 349 SUPERFAMILY SSF47384 121 186 3.53E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 Gene3D G3DSA:3.20.20.70 9 311 1.6E-90 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 SUPERFAMILY SSF51569 10 308 3.45E-87 T 28-03-2018 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 SMART SM01130 13 307 9.4E-105 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 50 67 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 47 68 2.2E-23 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 140 157 2.2E-23 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 115 131 2.2E-23 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 PRINTS PR00146 Dihydrodipicolinate synthase signature 83 101 2.2E-23 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 PIRSF PIRSF001365 9 310 4.6E-94 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 145 176 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CI104_RS09810 12df5159e2c6944d9f3c1ec958336db3 311 Pfam PF00701 Dihydrodipicolinate synthetase family 13 305 3.8E-112 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS11825 d587c3fe75ea1e61ae84a07a406afbd2 112 Gene3D G3DSA:3.30.1450.10 28 103 1.3E-5 T 28-03-2018 CI104_RS11825 d587c3fe75ea1e61ae84a07a406afbd2 112 Pfam PF04355 SmpA / OmlA family 33 96 4.1E-11 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CI104_RS03740 30ae24c0001849c28006076205842817 205 Hamap MF_01043 Glycerol-3-phosphate acyltransferase [plsY]. 7 193 18.423 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CI104_RS03740 30ae24c0001849c28006076205842817 205 Pfam PF02660 Glycerol-3-phosphate acyltransferase 11 184 1.4E-49 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CI104_RS03740 30ae24c0001849c28006076205842817 205 TIGRFAM TIGR00023 TIGR00023: acyl-phosphate glycerol 3-phosphate acyltransferase 1 195 2.4E-82 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CI104_RS03740 30ae24c0001849c28006076205842817 205 SMART SM01207 10 185 8.4E-85 T 28-03-2018 IPR003811 Glycerol-3-phosphate acyltransferase, PlsY GO:0005886|GO:0008654|GO:0043772 CI104_RS13455 a140e1f400ee80b2360c20a099eeabc0 388 Pfam PF03594 Benzoate membrane transport protein 7 381 4.3E-148 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CI104_RS13455 a140e1f400ee80b2360c20a099eeabc0 388 TIGRFAM TIGR00843 benE: benzoate transporter 1 382 4.6E-179 T 28-03-2018 IPR004711 Benzoate transporter GO:0016021|GO:0042919|GO:0042925 CI104_RS07615 1e6c9c5b642fb325bf0caed74b0eb4c7 155 Hamap MF_00009 Endoribonuclease YbeY [ybeY]. 5 148 24.977 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CI104_RS07615 1e6c9c5b642fb325bf0caed74b0eb4c7 155 SUPERFAMILY SSF55486 3 151 3.91E-51 T 28-03-2018 CI104_RS07615 1e6c9c5b642fb325bf0caed74b0eb4c7 155 Pfam PF02130 Uncharacterized protein family UPF0054 20 142 1.5E-39 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CI104_RS07615 1e6c9c5b642fb325bf0caed74b0eb4c7 155 TIGRFAM TIGR00043 TIGR00043: rRNA maturation RNase YbeY 40 144 3.8E-37 T 28-03-2018 IPR002036 Endoribonuclease YbeY GO:0004222|GO:0006364 CI104_RS07615 1e6c9c5b642fb325bf0caed74b0eb4c7 155 Gene3D G3DSA:3.40.390.30 1 155 5.9E-56 T 28-03-2018 IPR023091 Metalloprotease catalytic domain, predicted GO:0004222 CI104_RS07615 1e6c9c5b642fb325bf0caed74b0eb4c7 155 ProSitePatterns PS01306 Uncharacterized protein family UPF0054 signature. 114 124 - T 28-03-2018 IPR020549 Endoribonuclease YbeY, conserved site CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 Gene3D G3DSA:3.40.50.1000 1 270 1.2E-47 T 28-03-2018 IPR023214 HAD-like domain CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 237 4.8E-32 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 264 7.5E-76 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 264 9.8E-68 T 28-03-2018 IPR023214 HAD-like domain CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 218 240 - T 28-03-2018 CI104_RS00025 1f1d5405816ec5f603425156b122baac 270 SUPERFAMILY SSF56784 1 269 4.87E-76 T 28-03-2018 IPR023214 HAD-like domain CI104_RS16430 1c4bf011d4d0aad098e75ea6e8e11811 376 Gene3D G3DSA:3.40.50.2000 202 348 8.4E-24 T 28-03-2018 CI104_RS16430 1c4bf011d4d0aad098e75ea6e8e11811 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 30 361 2.4E-97 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CI104_RS16430 1c4bf011d4d0aad098e75ea6e8e11811 376 Gene3D G3DSA:3.40.50.2000 1 201 1.9E-70 T 28-03-2018 CI104_RS16430 1c4bf011d4d0aad098e75ea6e8e11811 376 SUPERFAMILY SSF53756 3 374 7.85E-117 T 28-03-2018 CI104_RS16430 1c4bf011d4d0aad098e75ea6e8e11811 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 4 363 1.2E-74 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 SUPERFAMILY SSF52151 190 306 5.75E-82 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 SUPERFAMILY SSF52151 4 122 5.75E-82 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 SUPERFAMILY SSF55048 128 197 5.75E-18 T 28-03-2018 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding GO:0003824|GO:0008152 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 PIRSF PIRSF000446 1 309 3.0E-143 T 28-03-2018 IPR024925 Malonyl CoA-acyl carrier protein transacylase KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 SMART SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. 7 309 1.1E-39 T 28-03-2018 IPR020801 Polyketide synthase, acyl transferase domain CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 Pfam PF00698 Acyl transferase domain 6 280 1.3E-38 T 28-03-2018 IPR014043 Acyl transferase CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 Gene3D G3DSA:3.40.366.10 185 309 2.2E-31 T 28-03-2018 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 Gene3D G3DSA:3.40.366.10 1 184 3.8E-52 T 28-03-2018 CI104_RS10530 c269b967e87118957a9bed9258d96c6b 309 TIGRFAM TIGR00128 fabD: malonyl CoA-acyl carrier protein transacylase 3 291 3.1E-133 T 28-03-2018 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type GO:0004314 KEGG: 00061+2.3.1.39|MetaCyc: PWY-4381|MetaCyc: PWY-6799|MetaCyc: PWY-7388 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 409 510 2.8E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 Pfam PF00367 phosphotransferase system, EIIB 454 483 2.8E-12 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 Gene3D G3DSA:3.30.1360.60 449 524 9.8E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 TIGRFAM TIGR02005 PTS-IIBC-alpha: PTS system, alpha-glucoside-specific IIBC component 2 524 3.5E-272 T 28-03-2018 IPR010975 Phosphotransferase system, alpha-glucoside-specific IIBC component GO:0008982|GO:0009401 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 Pfam PF02378 Phosphotransferase system, EIIC 10 346 3.7E-71 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 60 358 3.5E-89 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 SUPERFAMILY SSF55604 451 524 8.5E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS00095 c29f8560a5249f13992c5f4a874f9ff6 540 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 463 480 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS08405 e73c8675d6a92444870c5ec8c1d29942 473 PIRSF PIRSF002457 1 473 9.8E-148 T 28-03-2018 IPR030676 Citrate carrier CitT-related CI104_RS08405 e73c8675d6a92444870c5ec8c1d29942 473 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 28 467 1.3E-109 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS08405 e73c8675d6a92444870c5ec8c1d29942 473 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 471 1.4E-123 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 31 53 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 336 347 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 132 154 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 359 376 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 10 26 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 163 185 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 186 205 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 104 119 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PRINTS PR00477 Phosphoglycerate kinase family signature 303 328 1.6E-82 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 PIRSF PIRSF000724 1 387 2.2E-134 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 ProSitePatterns PS00111 Phosphoglycerate kinase signature. 15 25 - T 28-03-2018 IPR015911 Phosphoglycerate kinase, conserved site GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 SUPERFAMILY SSF53748 3 383 7.42E-145 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 Pfam PF00162 Phosphoglycerate kinase 6 373 4.0E-140 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 Hamap MF_00145 Phosphoglycerate kinase [pgk]. 8 383 39.141 T 28-03-2018 IPR001576 Phosphoglycerate kinase GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 Gene3D G3DSA:3.40.50.1260 3 174 4.7E-61 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04340 ae1a7425af9260f3a2bda1708005c7a5 387 Gene3D G3DSA:3.40.50.1260 175 371 3.4E-76 T 28-03-2018 IPR015824 Phosphoglycerate kinase, N-terminal GO:0004618|GO:0006096 KEGG: 00010+2.7.2.3|KEGG: 00710+2.7.2.3|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS17635 ef81c0d52d099b4558751a99cf5cec9a 188 Pfam PF00293 NUDIX domain 37 153 7.3E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS17635 ef81c0d52d099b4558751a99cf5cec9a 188 PIRSF PIRSF017340 2 172 2.0E-75 T 28-03-2018 IPR024195 NUDIX hydrolase, YfcD, predicted GO:0016817 CI104_RS17635 ef81c0d52d099b4558751a99cf5cec9a 188 SUPERFAMILY SSF55811 10 166 8.8E-36 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS17635 ef81c0d52d099b4558751a99cf5cec9a 188 Gene3D G3DSA:3.90.79.10 2 181 7.0E-40 T 28-03-2018 CI104_RS25220 f179861ebf64d698a3c7e2d6515d06b8 269 ProSitePatterns PS00211 ABC transporters family signature. 166 180 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS25220 f179861ebf64d698a3c7e2d6515d06b8 269 Pfam PF00005 ABC transporter 38 193 1.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS25220 f179861ebf64d698a3c7e2d6515d06b8 269 SMART SM00382 47 249 1.1E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25220 f179861ebf64d698a3c7e2d6515d06b8 269 Gene3D G3DSA:3.40.50.300 21 267 3.2E-63 T 28-03-2018 CI104_RS25220 f179861ebf64d698a3c7e2d6515d06b8 269 TIGRFAM TIGR00972 3a0107s01c2: phosphate ABC transporter, ATP-binding protein 23 269 4.9E-121 T 28-03-2018 IPR005670 Phosphate transport system permease protein 1 GO:0005315|GO:0016020|GO:0035435 CI104_RS25220 f179861ebf64d698a3c7e2d6515d06b8 269 SUPERFAMILY SSF52540 23 255 1.82E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 Gene3D G3DSA:1.10.10.10 86 156 9.1E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 Pfam PF04542 Sigma-70 region 2 6 69 1.8E-12 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 SUPERFAMILY SSF88659 94 149 5.61E-9 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 SUPERFAMILY SSF88946 5 86 3.81E-17 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 25 56 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 Pfam PF08281 Sigma-70, region 4 94 145 3.1E-9 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 10 149 2.2E-16 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27220 0af22c538ceaa428460e1003b6f6c553 169 Gene3D G3DSA:1.10.1740.10 2 70 2.0E-15 T 28-03-2018 CI104_RS08045 884fd05ebbd118851d7e05965893c19e 37 Pfam PF08173 Membrane bound YbgT-like protein 1 26 1.3E-14 T 28-03-2018 IPR012994 Membrane bound YbgT-like CI104_RS08045 884fd05ebbd118851d7e05965893c19e 37 TIGRFAM TIGR02106 cyd_oper_ybgT: cyd operon protein YbgT 1 29 3.4E-20 T 28-03-2018 IPR011724 Cyd operon protein YbgT MetaCyc: PWY-7545 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 172 306 6.0E-49 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 Pfam PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain 6 156 1.6E-48 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 SUPERFAMILY SSF69742 1 158 5.36E-47 T 28-03-2018 IPR015895 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 Gene3D G3DSA:3.40.50.720 161 313 1.7E-23 T 28-03-2018 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 ProSitePatterns PS00747 Glutamyl-tRNA reductase signature. 99 122 - T 28-03-2018 IPR018214 Glutamyl-tRNA reductase, conserved site GO:0008883|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 Gene3D G3DSA:1.10.1200.70 332 418 2.3E-22 T 28-03-2018 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 Pfam PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain 320 416 1.5E-23 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 SUPERFAMILY SSF69075 317 417 1.05E-26 T 28-03-2018 IPR015896 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 Hamap MF_00087 Glutamyl-tRNA reductase [hemA]. 2 418 30.807 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 SUPERFAMILY SSF51735 162 315 3.01E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 PIRSF PIRSF000445 1 418 3.0E-153 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS14440 bf494f1c0f44398ca6bb214658587d7e 418 TIGRFAM TIGR01035 hemA: glutamyl-tRNA reductase 4 418 1.9E-167 T 28-03-2018 IPR000343 Tetrapyrrole biosynthesis, glutamyl-tRNA reductase GO:0008883|GO:0033014|GO:0050661|GO:0055114 KEGG: 00860+1.2.1.70|MetaCyc: PWY-5188 CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 Gene3D G3DSA:3.30.390.10 1 131 1.6E-35 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 28 126 2.9E-17 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 192 223 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 Pfam PF13378 Enolase C-terminal domain-like 151 356 2.6E-58 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 SUPERFAMILY SSF54826 2 128 2.69E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 SMART SM00922 145 242 9.9E-22 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 Gene3D G3DSA:3.20.20.120 132 354 2.1E-64 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 101 126 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS21465 8da87bf4a1d334b86479b0a873807ade 379 SUPERFAMILY SSF51604 114 363 5.24E-71 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS28575 04b1bc7082dfc2da14c9fc654a0eb610 439 Pfam PF13751 Transposase DDE domain 364 436 4.0E-16 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS28575 04b1bc7082dfc2da14c9fc654a0eb610 439 Pfam PF05598 Transposase domain (DUF772) 55 124 2.8E-13 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 Pfam PF12833 Helix-turn-helix domain 309 384 3.1E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 SMART SM00342 301 384 9.1E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 SUPERFAMILY SSF46689 338 385 1.23E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 Gene3D G3DSA:3.40.50.2300 2 107 1.1E-8 T 28-03-2018 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 SUPERFAMILY SSF46689 284 332 5.91E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 Pfam PF13377 Periplasmic binding protein-like domain 113 277 4.0E-37 T 28-03-2018 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 Gene3D G3DSA:1.10.10.60 281 339 3.3E-8 T 28-03-2018 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 353 368 7.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 368 384 7.3E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 338 380 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 Gene3D G3DSA:1.10.10.60 340 387 4.9E-12 T 28-03-2018 CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 SUPERFAMILY SSF53822 10 298 3.0E-44 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS00815 98a95da5c26176f7e486deded2785b74 392 Gene3D G3DSA:3.40.50.2300 108 280 4.5E-30 T 28-03-2018 CI104_RS27510 290b9a1c0fe875297738cd93fb33ea80 401 Pfam PF13700 Domain of unknown function (DUF4158) 6 170 1.8E-44 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 Pfam PF00391 PEP-utilising enzyme, mobile domain 152 222 2.3E-22 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 SUPERFAMILY SSF52009 125 246 1.7E-36 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 447 465 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 Gene3D G3DSA:1.10.274.10 24 145 3.0E-35 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 Gene3D G3DSA:3.50.30.10 146 245 2.5E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 Pfam PF05524 PEP-utilising enzyme, N-terminal 4 126 2.7E-29 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 SUPERFAMILY SSF47831 23 143 1.57E-33 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 293 312 3.5E-31 T 28-03-2018 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 500 512 3.5E-31 T 28-03-2018 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 464 479 3.5E-31 T 28-03-2018 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 447 462 3.5E-31 T 28-03-2018 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 Gene3D G3DSA:3.20.20.60 250 573 8.3E-103 T 28-03-2018 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 2 566 4.1E-270 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 250 541 1.6E-126 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 SUPERFAMILY SSF51621 249 549 3.93E-110 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 PIRSF PIRSF000732 1 574 1.1E-217 T 28-03-2018 IPR024692 Phosphotransferase system, enzyme I GO:0008965|GO:0009401 CI104_RS18135 8a684f75bcf13286dabd47b96ac935f1 575 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 184 195 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 SUPERFAMILY SSF46785 2 76 5.45E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 Gene3D G3DSA:1.10.10.10 1 74 3.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 46 62 1.2E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 32 46 1.2E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 Pfam PF07729 FCD domain 96 219 1.6E-18 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 72 3.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 SUPERFAMILY SSF48008 94 222 6.28E-21 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 SMART SM00895 96 220 4.9E-16 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 Gene3D G3DSA:1.20.120.530 83 229 5.3E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS03245 6c90433cf7bb02ccb1d6ac2800dac390 258 SMART SM00345 13 72 4.0E-25 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 Hamap MF_00150 N-acetyl-gamma-glutamyl-phosphate reductase [argC]. 2 334 38.47 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 TIGRFAM TIGR01850 argC: N-acetyl-gamma-glutamyl-phosphate reductase 3 333 1.1E-124 T 28-03-2018 IPR000706 N-acetyl-gamma-glutamyl-phosphate reductase, type 1 GO:0003942|GO:0006526|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 163 311 2.0E-18 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 Gene3D G3DSA:3.30.360.10 163 308 1.0E-48 T 28-03-2018 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 5 146 2.9E-33 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 SUPERFAMILY SSF55347 154 308 4.51E-49 T 28-03-2018 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 SUPERFAMILY SSF51735 1 172 2.01E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 Gene3D G3DSA:3.40.50.720 1 162 3.8E-44 T 28-03-2018 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 SMART SM00859 3 146 7.1E-54 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS23965 af5918ba7abec87986ae2705f305a88e 334 ProSitePatterns PS01224 N-acetyl-gamma-glutamyl-phosphate reductase active site. 149 165 - T 28-03-2018 IPR023013 N-acetyl-gamma-glutamyl-phosphate reductase, active site GO:0003942|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SMART SM00316 620 690 3.6E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF03725 3' exoribonuclease family, domain 2 460 527 2.2E-4 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF03725 3' exoribonuclease family, domain 2 147 210 2.5E-14 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Gene3D G3DSA:1.10.10.400 249 316 6.0E-20 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Gene3D G3DSA:2.40.50.140 615 698 1.6E-26 T 28-03-2018 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain 241 320 6.7E-26 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF50249 608 693 1.47E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF54791 554 622 1.07E-17 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF54211 301 492 3.54E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF00013 KH domain 556 614 5.0E-9 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF00575 S1 RNA binding domain 619 690 2.8E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF55666 145 235 3.53E-31 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Gene3D G3DSA:3.30.1370.10 545 614 2.0E-13 T 28-03-2018 IPR004088 K Homology domain, type 1 GO:0003723 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Hamap MF_01595 Polyribonucleotide nucleotidyltransferase [pnp]. 3 693 30.536 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF54211 4 144 1.32E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS02915 382f44008089f067d20f2094682365c8 711 PIRSF PIRSF005499 2 711 2.7E-301 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Gene3D G3DSA:3.30.230.70 13 248 5.2E-54 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Gene3D G3DSA:3.30.230.70 317 544 4.8E-57 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SMART SM00322 552 617 1.2E-12 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF46915 226 325 1.7E-25 T 28-03-2018 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain GO:0000175|GO:0003723|GO:0006396 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CI104_RS02915 382f44008089f067d20f2094682365c8 711 TIGRFAM TIGR03591 polynuc_phos: polyribonucleotide nucleotidyltransferase 10 691 0.0 T 28-03-2018 IPR012162 Polyribonucleotide nucleotidyltransferase GO:0003723|GO:0004654|GO:0006402 KEGG: 00230+2.7.7.8|KEGG: 00240+2.7.7.8 CI104_RS02915 382f44008089f067d20f2094682365c8 711 SUPERFAMILY SSF55666 450 547 3.65E-27 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF01138 3' exoribonuclease family, domain 1 324 456 8.7E-21 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS02915 382f44008089f067d20f2094682365c8 711 Pfam PF01138 3' exoribonuclease family, domain 1 16 144 2.8E-18 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS17770 4b0f4cbdbf5e9aa5d1deffc16735449b 122 Gene3D G3DSA:3.90.1720.10 4 118 5.0E-5 T 28-03-2018 CI104_RS18845 2f6ef05a51305a045bda76bff7101ad9 216 Pfam PF03873 Anti sigma-E protein RseA, C-terminal domain 132 186 6.0E-26 T 28-03-2018 IPR005573 Anti sigma-E protein RseA, C-terminal CI104_RS18845 2f6ef05a51305a045bda76bff7101ad9 216 PIRSF PIRSF016938 1 205 1.2E-36 T 28-03-2018 IPR026279 Sigma-E factor negative regulatory protein RseA GO:0006950|GO:0016989 CI104_RS18845 2f6ef05a51305a045bda76bff7101ad9 216 SUPERFAMILY SSF89069 1 66 5.23E-23 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CI104_RS18845 2f6ef05a51305a045bda76bff7101ad9 216 Pfam PF03872 Anti sigma-E protein RseA, N-terminal domain 1 87 2.7E-37 T 28-03-2018 IPR005572 Anti sigma-E protein RseA, N-terminal GO:0016989 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 3 333 2.5E-171 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 Pfam PF02779 Transketolase, pyrimidine binding domain 353 523 6.0E-46 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 SMART SM00861 354 524 3.1E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 ProSitePatterns PS00801 Transketolase signature 1. 11 31 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 Gene3D G3DSA:3.40.50.970 364 539 1.4E-40 T 28-03-2018 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 Pfam PF02780 Transketolase, C-terminal domain 548 654 8.0E-19 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 ProSitePatterns PS00802 Transketolase signature 2. 466 482 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 TIGRFAM TIGR00232 tktlase_bact: transketolase 4 663 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 SUPERFAMILY SSF52518 5 328 3.48E-119 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 Gene3D G3DSA:3.40.50.970 1 363 1.4E-124 T 28-03-2018 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 SUPERFAMILY SSF52922 532 663 2.49E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 SUPERFAMILY SSF52518 332 525 8.99E-68 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS18330 b7624027f9a196d060ff33df82f2bb84 664 Gene3D G3DSA:3.40.50.920 540 664 2.1E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 Gene3D G3DSA:3.30.70.20 2 80 4.9E-20 T 28-03-2018 CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 Gene3D G3DSA:3.30.70.20 116 191 2.2E-13 T 28-03-2018 CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 Pfam PF13247 4Fe-4S dicluster domain 59 153 2.2E-28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 Gene3D G3DSA:3.30.70.20 81 115 2.1E-19 T 28-03-2018 CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 3 163 1.6E-84 T 28-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CI104_RS22935 0135f67f80f34101d8e14748ce8ce529 208 SUPERFAMILY SSF54862 1 191 1.02E-61 T 28-03-2018 CI104_RS13520 7f3a75769700ab6cce1e4f72d0e41512 210 Pfam PF00834 Ribulose-phosphate 3 epimerase family 3 195 8.2E-66 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS13520 7f3a75769700ab6cce1e4f72d0e41512 210 SUPERFAMILY SSF51366 1 207 7.85E-43 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS13520 7f3a75769700ab6cce1e4f72d0e41512 210 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 132 154 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS13520 7f3a75769700ab6cce1e4f72d0e41512 210 Gene3D G3DSA:3.20.20.70 1 209 4.3E-50 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS13520 7f3a75769700ab6cce1e4f72d0e41512 210 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 30 44 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS26410 8c0b38bfcc60d1e3deb84f287c0d0ccd 237 SUPERFAMILY SSF55729 28 198 1.17E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS26410 8c0b38bfcc60d1e3deb84f287c0d0ccd 237 Pfam PF13302 Acetyltransferase (GNAT) domain 35 174 3.9E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS26410 8c0b38bfcc60d1e3deb84f287c0d0ccd 237 Gene3D G3DSA:3.40.630.30 22 206 2.4E-23 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 SUPERFAMILY SSF50692 1083 1235 3.84E-48 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Gene3D G3DSA:2.40.40.20 1048 1238 3.1E-48 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Gene3D G3DSA:3.40.228.10 225 660 1.6E-104 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Gene3D G3DSA:4.10.1200.10 1 26 6.6E-15 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 777 794 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Gene3D G3DSA:3.40.50.740 108 214 1.6E-4 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Gene3D G3DSA:2.20.25.90 55 98 9.1E-29 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Gene3D G3DSA:3.30.2070.10 795 835 1.5E-5 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 SUPERFAMILY SSF53706 4 1070 0.0 T 28-03-2018 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Pfam PF00384 Molybdopterin oxidoreductase 108 833 4.0E-190 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1235 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 SMART SM00926 43 105 9.8E-9 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 3 40 1.5E-16 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 1125 1152 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS14360 d5cf43ed14c1a49b8572d7c5c0870403 1247 Pfam PF01568 Molydopterin dinucleotide binding domain 1088 1202 2.8E-23 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 Gene3D G3DSA:3.10.290.10 1 61 3.1E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 SMART SM00363 3 74 1.1E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 SUPERFAMILY SSF55120 69 235 9.66E-43 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 Pfam PF01479 S4 domain 4 43 2.0E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 Gene3D G3DSA:3.30.70.1560 151 219 2.4E-21 T 28-03-2018 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 73 233 3.4E-64 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 Pfam PF00849 RNA pseudouridylate synthase 69 199 1.2E-15 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 107 121 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 SUPERFAMILY SSF55174 5 98 1.77E-13 T 28-03-2018 CI104_RS14130 cf53985559aa2ca495c41f3ccc05ce8a 291 Gene3D G3DSA:3.30.70.580 62 150 7.4E-17 T 28-03-2018 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 26 42 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 277 290 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 329 344 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 48 64 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 254 272 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 88 98 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 PRINTS PR00337 Leu/Ile/Val-binding protein family signature 67 85 3.2E-68 T 28-03-2018 IPR000709 Leu/Ile/Val-binding protein GO:0006865 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 Gene3D G3DSA:3.40.50.2300 202 350 9.2E-18 T 28-03-2018 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 Pfam PF13458 Periplasmic binding protein 25 362 2.0E-60 T 28-03-2018 IPR028081 Leucine-binding protein domain CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 Gene3D G3DSA:3.40.50.2300 16 201 1.1E-38 T 28-03-2018 CI104_RS01445 66afebc91c7db1271243e9b03f156e48 369 SUPERFAMILY SSF53822 24 364 3.53E-89 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS21170 24097c65a29290280719d14738b5afb1 407 Gene3D G3DSA:3.30.70.1250 129 235 1.6E-51 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 Gene3D G3DSA:3.40.720.10 276 406 1.7E-10 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 PIRSF PIRSF001491 1 407 2.3E-163 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 Hamap MF_00740 Phosphopentomutase [deoB]. 1 407 55.3 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 SUPERFAMILY SSF143856 117 235 2.75E-50 T 28-03-2018 IPR024052 Phosphopentomutase DeoB cap domain GO:0008973 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 Gene3D G3DSA:3.40.720.10 1 128 6.2E-20 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 TIGRFAM TIGR01696 deoB: phosphopentomutase 3 405 1.4E-202 T 28-03-2018 IPR010045 Phosphopentomutase GO:0000287|GO:0005737|GO:0008973|GO:0009117|GO:0043094 KEGG: 00030+5.4.2.7|KEGG: 00230+5.4.2.7|MetaCyc: PWY-7180 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 Pfam PF01676 Metalloenzyme superfamily 2 398 1.5E-44 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 SUPERFAMILY SSF53649 1 114 3.69E-68 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS21170 24097c65a29290280719d14738b5afb1 407 SUPERFAMILY SSF53649 236 406 3.69E-68 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 SUPERFAMILY SSF55658 1 57 3.14E-19 T 28-03-2018 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 SUPERFAMILY SSF55653 60 149 2.62E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 TIGRFAM TIGR00158 L9: ribosomal protein bL9 1 149 1.5E-57 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 Gene3D G3DSA:3.40.5.10 1 49 6.1E-23 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 Pfam PF03948 Ribosomal protein L9, C-terminal domain 64 148 2.8E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 Hamap MF_00503 50S ribosomal protein L9 [rplI]. 1 149 25.441 T 28-03-2018 IPR020594 Ribosomal protein L9, bacteria/chloroplast GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 Gene3D G3DSA:3.10.430.100 63 148 1.1E-25 T 28-03-2018 IPR020069 Ribosomal protein L9, C-terminal CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 Pfam PF01281 Ribosomal protein L9, N-terminal domain 1 46 3.9E-22 T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22410 5273212993d98dd9b133961d5adf3211 149 ProSitePatterns PS00651 Ribosomal protein L9 signature. 13 40 - T 28-03-2018 IPR020070 Ribosomal protein L9, N-terminal Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Gene3D G3DSA:2.160.10.10 245 322 6.8E-18 T 28-03-2018 CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 395 429 1.8E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 353 382 0.0029 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 266 300 3.7E-6 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 403 431 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 SUPERFAMILY SSF53448 6 252 3.69E-66 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Gene3D G3DSA:2.160.10.10 323 440 6.7E-32 T 28-03-2018 CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 TIGRFAM TIGR01173 glmU: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 6 455 1.2E-205 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Pfam PF12804 MobA-like NTP transferase domain 8 122 5.2E-19 T 28-03-2018 IPR025877 MobA-like NTP transferase CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Hamap MF_01631 Bifunctional protein GlmU [glmU]. 5 452 42.997 T 28-03-2018 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase GO:0000287|GO:0000902|GO:0003977|GO:0005737|GO:0009103|GO:0009252|GO:0019134 KEGG: 00520+2.3.1.157+2.7.7.23|KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5514|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587 CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 Gene3D G3DSA:3.90.550.10 3 244 9.2E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS25195 2c6e06a34c35abd96faf02c450992140 456 SUPERFAMILY SSF51161 255 439 1.63E-52 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SUPERFAMILY SSF51126 1820 2256 9.42E-16 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Gene3D G3DSA:2.160.20.20 2225 2787 4.3E-29 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Gene3D G3DSA:2.160.20.20 845 1394 3.3E-11 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 2454 2483 6900.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 770 803 4800.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 1088 1110 170.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 2317 2338 3000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 1439 1460 6500.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 2892 2920 4700.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 656 686 9800.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00710 2704 2735 3600.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2668 3104 1.2E-54 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1820 1851 4.2E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 1499 1529 3.5E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2526 2556 2.1E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2436 2467 5.7E-10 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2595 2624 3.5E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 2126 2157 5.8E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 23 1.9E-8 T 28-03-2018 IPR024973 ESPR domain CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SUPERFAMILY SSF103515 2805 3089 4.58E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SMART SM00869 2825 3088 1.8E-35 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SUPERFAMILY SSF51126 2307 2494 2.2E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SUPERFAMILY SSF51126 2252 2276 2.2E-7 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 2439 2466 6.5E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 1821 1850 6.2E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 2127 2156 6.6E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 2596 2622 2.1E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 1434 1453 0.027 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 1499 1528 0.0041 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 Pfam PF12951 Passenger-associated-transport-repeat 2526 2555 5.8E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS07090 2a4099ba5926e5138fd28baea2a143de 3104 SUPERFAMILY SSF51126 2477 2784 3.77E-27 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 Gene3D G3DSA:3.30.2140.10 138 268 1.1E-13 T 28-03-2018 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 Gene3D G3DSA:3.30.2140.10 2 137 2.8E-40 T 28-03-2018 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 21 44 2.5E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 151 170 2.5E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 45 68 2.5E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 101 126 2.5E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 PRINTS PR01543 Arylamine N-acetyltransferase signature 69 91 2.5E-10 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 Pfam PF00797 N-acetyltransferase 22 255 1.0E-82 T 28-03-2018 IPR001447 Arylamine N-acetyltransferase GO:0008152|GO:0016407 KEGG: 00232+2.3.1.5|KEGG: 00633+2.3.1.5|KEGG: 00983+2.3.1.5|Reactome: R-HSA-156582 CI104_RS13255 efe2d2d9d4f6bf93b460681267b2fe1d 281 SUPERFAMILY SSF54001 2 267 1.1E-84 T 28-03-2018 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Gene3D G3DSA:1.10.1240.10 652 731 9.3E-38 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 SUPERFAMILY SSF52242 742 894 1.57E-48 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Pfam PF02310 B12 binding domain 748 840 3.7E-18 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Pfam PF00809 Pterin binding enzyme 360 598 3.3E-62 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Gene3D G3DSA:3.20.20.20 345 644 7.2E-75 T 28-03-2018 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 TIGRFAM TIGR02082 metH: methionine synthase 12 1192 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Gene3D G3DSA:3.10.196.10 956 1080 8.6E-46 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Gene3D G3DSA:3.10.196.10 1081 1227 1.5E-64 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 SUPERFAMILY SSF82282 7 399 9.29E-119 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 SUPERFAMILY SSF47644 653 739 9.15E-29 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Gene3D G3DSA:3.40.50.280 732 903 8.3E-56 T 28-03-2018 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Pfam PF02965 Vitamin B12 dependent methionine synthase, activation domain 938 1208 1.5E-126 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Pfam PF02607 B12 binding domain 660 733 3.0E-25 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 SMART SM01018 657 740 6.7E-45 T 28-03-2018 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Pfam PF02574 Homocysteine S-methyltransferase 17 325 1.9E-79 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 Gene3D G3DSA:3.20.20.330 2 337 1.5E-112 T 28-03-2018 IPR003726 Homocysteine-binding domain Reactome: R-HSA-1614635 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 SUPERFAMILY SSF51717 356 630 2.88E-88 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 SUPERFAMILY SSF56507 903 1226 8.76E-135 T 28-03-2018 IPR004223 Vitamin B12-dependent methionine synthase, activation domain GO:0008705|GO:0009086 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS23600 ec5c7acb4dff15dc9ddc5f59124d3f00 1227 PIRSF PIRSF000381 1 1195 0.0 T 28-03-2018 IPR011822 Cobalamin-dependent methionine synthase GO:0008270|GO:0008705|GO:0009086|GO:0031419 KEGG: 00270+2.1.1.13|KEGG: 00450+2.1.1.13|KEGG: 00670+2.1.1.13|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82693 788 833 5.93E-6 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82693 662 701 5.93E-6 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Gene3D G3DSA:1.20.1640.10 801 1022 6.6E-36 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82866 291 490 8.5E-49 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82714 703 785 5.36E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 330 353 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 357 378 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 463 486 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 605 619 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 438 461 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 385 409 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 PRINTS PR00702 Acriflavin resistance protein family signature 542 559 1.2E-88 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82693 136 182 2.09E-21 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82693 268 324 2.09E-21 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82693 555 650 3.14E-18 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Gene3D G3DSA:1.20.1640.10 268 492 3.1E-48 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Gene3D G3DSA:3.30.70.1430 40 142 2.2E-25 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Gene3D G3DSA:3.30.2090.10 181 267 4.2E-14 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Gene3D G3DSA:3.30.70.1430 557 652 2.6E-14 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Pfam PF00873 AcrB/AcrD/AcrF family 4 1008 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82714 183 266 1.57E-15 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82693 40 135 5.58E-23 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Gene3D G3DSA:3.30.2090.10 701 788 1.4E-16 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 SUPERFAMILY SSF82866 811 1010 2.22E-43 T 28-03-2018 CI104_RS16615 6691a92653a828d057f7107514ea8f83 1026 Hamap MF_01424 Multidrug resistance protein MdtC [mdtC]. 1 1024 27.016 T 28-03-2018 IPR023931 Multidrug resistance protein MdtC CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 SUPERFAMILY SSF160996 190 338 4.45E-43 T 28-03-2018 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 SUPERFAMILY SSF51905 3 188 5.43E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 SUPERFAMILY SSF51905 337 395 5.43E-60 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 Pfam PF03486 HI0933-like protein 5 392 1.2E-156 T 28-03-2018 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 Gene3D G3DSA:1.10.8.260 269 321 6.5E-14 T 28-03-2018 IPR023166 HI0933 insert-like domain CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 Gene3D G3DSA:2.40.30.10 188 268 6.2E-23 T 28-03-2018 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 TIGRFAM TIGR00275 TIGR00275: flavoprotein, HI0933 family 7 392 6.0E-128 T 28-03-2018 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 155 164 2.1E-7 T 28-03-2018 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 362 369 2.1E-7 T 28-03-2018 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 5 27 2.1E-7 T 28-03-2018 CI104_RS01195 9bf8fa13346e0a56c925eff8b139e714 397 Gene3D G3DSA:3.50.50.60 4 176 1.0E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 SUPERFAMILY SSF54826 1 138 6.75E-33 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 Gene3D G3DSA:3.30.390.10 1 125 3.7E-34 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 SUPERFAMILY SSF51604 123 369 2.49E-51 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 110 135 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 Gene3D G3DSA:3.20.20.120 126 358 1.4E-44 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 41 135 5.3E-17 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 Pfam PF13378 Enolase C-terminal domain-like 166 360 5.4E-39 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 195 226 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS21475 208b95c8c5dd3b42c8c8cc7623f89911 372 SMART SM00922 154 246 1.7E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS07100 327cbbf7ec133d081e352c523d1be7bb 391 Gene3D G3DSA:1.10.287.110 230 369 1.4E-4 T 28-03-2018 IPR001623 DnaJ domain CI104_RS07100 327cbbf7ec133d081e352c523d1be7bb 391 SUPERFAMILY SSF46565 220 289 7.46E-6 T 28-03-2018 IPR001623 DnaJ domain CI104_RS21565 b4743793f626856980a6e480fbb37001 255 Pfam PF01869 BadF/BadG/BcrA/BcrD ATPase family 5 248 1.7E-64 T 28-03-2018 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type Reactome: R-HSA-446210 CI104_RS21565 b4743793f626856980a6e480fbb37001 255 Gene3D G3DSA:3.30.420.40 93 233 9.3E-33 T 28-03-2018 CI104_RS21565 b4743793f626856980a6e480fbb37001 255 SUPERFAMILY SSF53067 3 250 9.31E-31 T 28-03-2018 CI104_RS21565 b4743793f626856980a6e480fbb37001 255 Gene3D G3DSA:3.30.420.40 2 92 0.021 T 28-03-2018 CI104_RS21565 b4743793f626856980a6e480fbb37001 255 TIGRFAM TIGR00241 CoA_E_activ: putative CoA-substrate-specific enzyme activase 3 247 2.6E-98 T 28-03-2018 IPR008275 CoA enzyme activase CI104_RS10550 7dff9964fba506649e3fce334241692a 269 TIGRFAM TIGR03461 pabC_Proteo: aminodeoxychorismate lyase 3 262 4.4E-111 T 28-03-2018 IPR017824 Aminodeoxychorismate lyase, class IV GO:0008696|GO:0030170|GO:0046656 KEGG: 00790+4.1.3.38|MetaCyc: PWY-6543 CI104_RS10550 7dff9964fba506649e3fce334241692a 269 Gene3D G3DSA:3.30.470.10 1 110 9.9E-21 T 28-03-2018 CI104_RS10550 7dff9964fba506649e3fce334241692a 269 Gene3D G3DSA:3.20.10.10 113 259 2.4E-34 T 28-03-2018 CI104_RS10550 7dff9964fba506649e3fce334241692a 269 SUPERFAMILY SSF56752 2 262 2.62E-67 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CI104_RS10550 7dff9964fba506649e3fce334241692a 269 Pfam PF01063 Amino-transferase class IV 24 246 1.5E-47 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CI104_RS10550 7dff9964fba506649e3fce334241692a 269 ProSitePatterns PS00770 Aminotransferases class-IV signature. 173 202 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CI104_RS23595 a8b8a25476a1e95e1bd6254a9f1050e4 543 Pfam PF02690 Na+/Pi-cotransporter 13 147 5.3E-36 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CI104_RS23595 a8b8a25476a1e95e1bd6254a9f1050e4 543 Gene3D G3DSA:1.20.58.220 322 432 2.7E-8 T 28-03-2018 CI104_RS23595 a8b8a25476a1e95e1bd6254a9f1050e4 543 Gene3D G3DSA:1.20.58.220 433 543 1.5E-9 T 28-03-2018 CI104_RS23595 a8b8a25476a1e95e1bd6254a9f1050e4 543 TIGRFAM TIGR00704 NaPi_cotrn_rel: Na/Pi-cotransporter II-related protein 1 308 5.1E-134 T 28-03-2018 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein GO:0016020 CI104_RS23595 a8b8a25476a1e95e1bd6254a9f1050e4 543 SUPERFAMILY SSF109755 321 531 7.74E-23 T 28-03-2018 CI104_RS23595 a8b8a25476a1e95e1bd6254a9f1050e4 543 TIGRFAM TIGR01013 2a58: sodium-dependent inorganic phosphate (Pi) transporter 67 520 3.6E-162 T 28-03-2018 IPR003841 Sodium-dependent phosphate transport protein GO:0015321|GO:0016020|GO:0044341 Reactome: R-HSA-427589 CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 Gene3D G3DSA:3.40.190.10 8 160 4.5E-47 T 28-03-2018 CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 Gene3D G3DSA:3.40.190.10 161 265 1.3E-15 T 28-03-2018 CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 SUPERFAMILY SSF53850 15 264 6.26E-76 T 28-03-2018 CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 65 78 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 SMART SM00079 42 262 5.9E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 SMART SM00062 42 263 3.8E-85 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS15785 1fc1f67f4b2619dd538c5149e7cd161a 266 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 44 261 6.5E-71 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 Gene3D G3DSA:3.30.70.20 24 126 1.0E-10 T 28-03-2018 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 PIRSF PIRSF005784 3 191 3.1E-83 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 Hamap MF_00463 Electron transport complex subunit RsxB [rsxB]. 4 185 42.635 T 28-03-2018 IPR016463 Electron transport complex, RnfB/RsxB, Proteobacteria GO:0005886|GO:0022900|GO:0051536 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 Gene3D G3DSA:3.30.70.20 148 180 1.1E-5 T 28-03-2018 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 Gene3D G3DSA:3.30.70.20 127 147 1.5E-11 T 28-03-2018 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 SUPERFAMILY SSF54862 38 175 1.95E-28 T 28-03-2018 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 147 158 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 TIGRFAM TIGR01944 rnfB: electron transport complex, RnfABCDGE type, B subunit 1 191 1.7E-86 T 28-03-2018 IPR010207 Electron transport complex, RnfB/RsxB GO:0009055|GO:0051536 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 Pfam PF04060 Putative Fe-S cluster 44 76 4.2E-12 T 28-03-2018 IPR007202 4Fe-4S domain GO:0051536 CI104_RS12515 0645c32c699605be034c26dc2176a56c 192 Pfam PF14697 4Fe-4S dicluster domain 110 163 2.3E-16 T 28-03-2018 CI104_RS06035 d66f1951eada0eb84a7271aa3fe084d4 102 ProDom PD068630 MEMBRANE INNER YAIY TRANSMEMBRANE 1 102 2.0E-49 T 28-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 CI104_RS06035 d66f1951eada0eb84a7271aa3fe084d4 102 Pfam PF10954 Protein of unknown function (DUF2755) 1 101 7.7E-50 T 28-03-2018 IPR020513 Uncharacterised protein family, inner membrane YaiY GO:0016021 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Pfam PF02875 Mur ligase family, glutamate ligase domain 313 389 2.2E-15 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Gene3D G3DSA:3.90.190.20 312 452 1.8E-39 T 28-03-2018 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Pfam PF01225 Mur ligase family, catalytic domain 26 95 8.3E-10 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Gene3D G3DSA:3.40.1190.10 90 309 2.5E-57 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 TIGRFAM TIGR01143 murF: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase 29 446 4.8E-142 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 SUPERFAMILY SSF63418 1 96 9.29E-28 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Hamap MF_02019 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [murF]. 4 447 34.525 T 28-03-2018 IPR005863 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase GO:0005524|GO:0005737|GO:0047480|GO:0071555 KEGG: 00300+6.3.2.10|KEGG: 00550+6.3.2.10|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 SUPERFAMILY SSF53623 101 310 4.84E-60 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Gene3D G3DSA:3.40.1390.10 1 89 2.1E-27 T 28-03-2018 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 Pfam PF08245 Mur ligase middle domain 106 292 1.9E-51 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04880 6c52042ebe4893d6fbb7e624800ae4f4 452 SUPERFAMILY SSF53244 313 446 1.79E-37 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS10520 d7bda2b160159f19fa98cfd83215f3c7 358 Pfam PF02504 Fatty acid synthesis protein 5 331 7.2E-129 T 28-03-2018 IPR003664 Fatty acid synthesis PlsX protein GO:0003824|GO:0006633|GO:0016747 CI104_RS10520 d7bda2b160159f19fa98cfd83215f3c7 358 SUPERFAMILY SSF53659 4 340 5.76E-104 T 28-03-2018 CI104_RS10520 d7bda2b160159f19fa98cfd83215f3c7 358 TIGRFAM TIGR00182 plsX: fatty acid/phospholipid synthesis protein PlsX 6 344 1.2E-147 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CI104_RS10520 d7bda2b160159f19fa98cfd83215f3c7 358 Hamap MF_00019 Phosphate acyltransferase [plsX]. 1 344 142.036 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CI104_RS10520 d7bda2b160159f19fa98cfd83215f3c7 358 Gene3D G3DSA:3.40.718.10 1 340 4.3E-117 T 28-03-2018 CI104_RS10520 d7bda2b160159f19fa98cfd83215f3c7 358 PIRSF PIRSF002465 2 343 1.7E-128 T 28-03-2018 IPR012281 Phospholipid biosynthesis protein, PlsX-like GO:0006633 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 946 1076 1.2E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 548 718 7.6E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SUPERFAMILY SSF48452 478 560 1.52E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 513 547 1.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 858 945 4.2E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Pfam PF13432 Tetratricopeptide repeat 499 557 0.0077 T 28-03-2018 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 731 796 1.6E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 797 834 0.032 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SUPERFAMILY SSF48452 895 1012 1.43E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SUPERFAMILY SSF48452 745 815 1.43E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SUPERFAMILY SSF48452 570 639 1.43E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SUPERFAMILY SSF48452 1042 1083 1.43E-17 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SMART SM00028 568 601 64.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SMART SM00028 775 809 420.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SMART SM00028 494 527 450.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SMART SM00028 741 774 0.047 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 SMART SM00028 932 965 67.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Pfam PF17128 Domain of unknown function (DUF5107) 40 344 5.3E-63 T 28-03-2018 IPR033396 Domain of unknown function DUF5107 CI104_RS18700 517af11bdd21406950e49ae4e0622cee 1088 Gene3D G3DSA:1.25.40.10 458 512 1.0E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS03450 94514e8930a58a75551a2fa9908063f4 77 Pfam PF10809 Protein of unknown function (DUF2732) 1 76 2.6E-30 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 CI104_RS03450 94514e8930a58a75551a2fa9908063f4 77 ProDom PD057914 C0939 STY4639 GPA GP33 PRECURSOR FELS-2 5'REGION STY3665 SIGNAL PHAGE-RELATED 9 77 8.0E-30 T 28-03-2018 IPR020126 Protein of unknown function DUF2732 CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 Pfam PF00106 short chain dehydrogenase 10 205 4.2E-58 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 151 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 161 180 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 229 249 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 182 199 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 9.6E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 SUPERFAMILY SSF51735 8 266 2.26E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 161 180 3.8E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 3.8E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 141 149 3.8E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 Gene3D G3DSA:3.40.50.720 5 267 4.0E-63 T 28-03-2018 CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 148 176 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS23540 86eb66563e7d56c225dad76eb8a054cd 268 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 10 196 0.0013 T 28-03-2018 CI104_RS05550 52c4a40bd059ac488e2a00f165740d49 627 Pfam PF05947 Type VI secretion system, TssF 6 624 3.1E-209 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS05550 52c4a40bd059ac488e2a00f165740d49 627 PIRSF PIRSF028304 1 627 3.3E-167 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS05550 52c4a40bd059ac488e2a00f165740d49 627 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 5 625 5.8E-189 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS17565 3e5d8d3f4499ab9141d834a5be85d260 199 Hamap MF_01100 5'-deoxynucleotidase YfbR [yfbR]. 3 195 44.173 T 28-03-2018 IPR022971 5'-deoxynucleotidase YfbR KEGG: 00240+3.1.3.89 CI104_RS17565 3e5d8d3f4499ab9141d834a5be85d260 199 Pfam PF13023 HD domain 11 162 2.9E-17 T 28-03-2018 IPR006674 HD domain CI104_RS17565 3e5d8d3f4499ab9141d834a5be85d260 199 SUPERFAMILY SSF109604 2 193 3.71E-45 T 28-03-2018 CI104_RS17565 3e5d8d3f4499ab9141d834a5be85d260 199 ProDom PD353566 UPF0207 HYDROLASE HD PHOSPHOHYDROLASE METAL-DEPENDENT SUBDOMAIN YFBR PHOSPHOHYDROLASE NUCLEOTIDE-BINDING NUCLEOSIDE 80 172 1.0E-45 T 28-03-2018 CI104_RS17565 3e5d8d3f4499ab9141d834a5be85d260 199 SMART SM00471 26 151 5.2E-7 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS17565 3e5d8d3f4499ab9141d834a5be85d260 199 Gene3D G3DSA:1.10.3210.10 1 199 7.8E-55 T 28-03-2018 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 Pfam PF04055 Radical SAM superfamily 380 585 1.0E-19 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 Pfam PF11842 Domain of unknown function (DUF3362) 594 716 3.5E-44 T 28-03-2018 IPR024560 Uncharacterised protein family UPF0313, C-terminal CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 TIGRFAM TIGR03904 SAM_YgiQ: uncharacterized radical SAM protein YgiQ 29 644 2.2E-265 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 Pfam PF08497 Radical SAM N-terminal 29 379 8.9E-146 T 28-03-2018 IPR013704 Uncharacterised protein family UPF0313, N-terminal CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 SUPERFAMILY SSF102114 361 440 5.49E-11 T 28-03-2018 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 SUPERFAMILY SSF102114 470 624 5.49E-11 T 28-03-2018 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 380 400 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 Hamap MF_01251 UPF0313 protein YgiQ [ygiQ]. 29 646 50.833 T 28-03-2018 IPR022946 Uncharacterised protein family UPF0313 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 Gene3D G3DSA:3.20.20.70 304 722 7.5E-31 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS03925 f8e88be820a9307d93ca3c162a460c05 723 SMART SM00729 376 626 4.7E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 Gene3D G3DSA:3.30.1300.10 180 283 6.6E-30 T 28-03-2018 CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 SUPERFAMILY SSF52374 3 280 5.0E-104 T 28-03-2018 CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 Pfam PF02569 Pantoate-beta-alanine ligase 3 278 5.7E-101 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 Gene3D G3DSA:3.40.50.620 1 176 3.5E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 Hamap MF_00158 Pantothenate synthetase [panC]. 2 280 39.382 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 TIGRFAM TIGR00018 panC: pantoate--beta-alanine ligase 2 280 4.8E-121 T 28-03-2018 IPR003721 Pantoate-beta-alanine ligase GO:0004592|GO:0015940 KEGG: 00410+6.3.2.1|KEGG: 00770+6.3.2.1 CI104_RS05150 2592b3ee7a9624093d94b676bb0ee098 284 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 24 65 1.6E-7 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS28700 00717f19f3b680b4586912c35d06675f 314 Gene3D G3DSA:1.10.260.40 50 141 0.008 T 28-03-2018 CI104_RS28700 00717f19f3b680b4586912c35d06675f 314 SUPERFAMILY SSF47598 2 43 2.78E-5 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS28700 00717f19f3b680b4586912c35d06675f 314 Gene3D G3DSA:1.10.1220.10 1 39 5.3E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 ProDom PD001295 RIBOSOMAL S17 30S RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 40S S11 S17P S11 6 76 3.0E-35 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 ProSitePatterns PS00056 Ribosomal protein S17 signature. 56 68 - T 28-03-2018 IPR019979 Ribosomal protein S17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 TIGRFAM TIGR03635 uS17_bact: ribosomal protein uS17 6 76 1.8E-38 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 Gene3D G3DSA:2.40.50.140 5 82 6.6E-35 T 28-03-2018 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 SUPERFAMILY SSF50249 5 82 1.46E-33 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 Hamap MF_01345_B 30S ribosomal protein S17 [rpsQ]. 5 80 25.191 T 28-03-2018 IPR019984 30S ribosomal protein S17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 PRINTS PR00973 Ribosomal protein S17 family signature 24 47 6.5E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 PRINTS PR00973 Ribosomal protein S17 family signature 56 66 6.5E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 PRINTS PR00973 Ribosomal protein S17 family signature 66 73 6.5E-14 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02090 90b338e40eebc0f211209d041bcd8c96 84 Pfam PF00366 Ribosomal protein S17 10 76 2.6E-34 T 28-03-2018 IPR000266 Ribosomal protein S17/S11 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Gene3D G3DSA:2.40.40.20 672 811 3.0E-33 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Gene3D G3DSA:3.40.228.10 608 671 9.4E-12 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 726 753 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Gene3D G3DSA:2.20.25.90 50 119 7.5E-18 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 80 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 SUPERFAMILY SSF53706 57 692 1.83E-170 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Gene3D G3DSA:3.40.228.10 210 485 2.3E-66 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 811 0.0 T 28-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 SUPERFAMILY SSF50692 636 811 1.2E-37 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 115 8.4E-14 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Gene3D G3DSA:3.40.50.740 120 209 2.8E-11 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 SMART SM00926 56 115 2.3E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Gene3D G3DSA:3.90.55.10 530 607 1.9E-14 T 28-03-2018 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Pfam PF00384 Molybdopterin oxidoreductase 118 568 4.7E-83 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12720 1a4fb46bbdf3127674ac06a417874d0e 811 Pfam PF01568 Molydopterin dinucleotide binding domain 690 803 1.3E-26 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 Pfam PF00702 haloacid dehalogenase-like hydrolase 301 530 3.3E-38 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF81653 117 207 5.23E-21 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 Gene3D G3DSA:2.70.150.10 17 208 1.5E-23 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF81660 316 450 1.11E-37 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF56784 293 317 6.78E-39 T 28-03-2018 IPR023214 HAD-like domain CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF56784 377 404 6.78E-39 T 28-03-2018 IPR023214 HAD-like domain CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF56784 435 559 6.78E-39 T 28-03-2018 IPR023214 HAD-like domain CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 Pfam PF00122 E1-E2 ATPase 117 282 5.8E-34 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 Hamap MF_00285 Potassium-transporting ATPase ATP-binding subunit [kdpB]. 8 680 41.524 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 TIGRFAM TIGR01497 kdpB: K+-transporting ATPase, B subunit 2 677 0.0 T 28-03-2018 IPR006391 P-type ATPase, B chain, subfamily IA GO:0005524|GO:0006813|GO:0008556|GO:0016021 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 Gene3D G3DSA:3.40.1110.10 316 443 2.4E-25 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF81665 619 662 7.59E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF81665 30 103 7.59E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 SUPERFAMILY SSF81665 208 299 7.59E-12 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 307 313 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 154 168 3.7E-24 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 539 551 3.7E-24 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 463 473 3.7E-24 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 305 319 3.7E-24 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 516 535 3.7E-24 T 28-03-2018 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 72 337 2.0E-37 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 372 604 6.0E-49 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS07800 070f08c9e40f394903e3495ab5fcf005 682 Gene3D G3DSA:3.40.50.1000 444 577 3.5E-34 T 28-03-2018 IPR023214 HAD-like domain CI104_RS03135 e22bc6a3a2ee7437e3f99c059cdf484a 381 SUPERFAMILY SSF110738 1 375 6.67E-140 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS03135 e22bc6a3a2ee7437e3f99c059cdf484a 381 Pfam PF02595 Glycerate kinase family 3 373 3.5E-147 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS03135 e22bc6a3a2ee7437e3f99c059cdf484a 381 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 374 1.7E-167 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS03135 e22bc6a3a2ee7437e3f99c059cdf484a 381 PIRSF PIRSF006078 1 377 8.2E-139 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS03135 e22bc6a3a2ee7437e3f99c059cdf484a 381 Gene3D G3DSA:3.90.1510.10 42 276 3.8E-95 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 Gene3D G3DSA:3.30.540.10 6 197 5.2E-62 T 28-03-2018 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PIRSF PIRSF500210 1 330 1.4E-124 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 Hamap MF_01855 Fructose-1,6-bisphosphatase class 1 [fbp]. 2 328 41.977 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 ProSitePatterns PS00124 Fructose-1-6-bisphosphatase active site. 268 280 - T 28-03-2018 IPR020548 Fructose-1,6-bisphosphatase, active site GO:0005975|GO:0042578 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 Gene3D G3DSA:3.40.190.80 198 329 1.6E-57 T 28-03-2018 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 SUPERFAMILY SSF56655 2 326 2.23E-112 T 28-03-2018 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 177 200 7.1E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 27 54 7.1E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 146 169 7.1E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 203 230 7.1E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 302 327 7.1E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PRINTS PR00115 Fructose-1,6-bisphosphatase signature 64 90 7.1E-71 T 28-03-2018 IPR028343 Fructose-1,6-bisphosphatase GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 PIRSF PIRSF000904 1 331 5.6E-121 T 28-03-2018 IPR000146 Fructose-1,6-bisphosphatase class 1 GO:0005975|GO:0016791 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS22230 8676bd18ad41315cd0cf3260db8166e9 332 Pfam PF00316 Fructose-1-6-bisphosphatase, N-terminal domain 3 192 2.2E-83 T 28-03-2018 IPR033391 Fructose-1-6-bisphosphatase class I, N-terminal KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484|Reactome: R-HSA-70263 CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 SUPERFAMILY SSF50129 1 144 2.36E-47 T 28-03-2018 IPR011032 GroES-like CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 SMART SM00829 12 321 2.0E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 SUPERFAMILY SSF51735 116 284 1.2E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 Gene3D G3DSA:3.40.50.720 161 269 5.1E-14 T 28-03-2018 CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 Pfam PF00107 Zinc-binding dehydrogenase 158 282 3.3E-16 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 Gene3D G3DSA:3.90.180.10 1 160 3.2E-34 T 28-03-2018 CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 85 1.2E-4 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS02445 4d6f888fd2f0c39ff20f89872921c532 324 TIGRFAM TIGR02823 oxido_YhdH: putative quinone oxidoreductase, YhdH/YhfP family 2 323 5.4E-143 T 28-03-2018 IPR014188 Acrylyl-CoA reductase AcuI CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Gene3D G3DSA:3.40.50.300 6 478 2.5E-8 T 28-03-2018 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Gene3D G3DSA:1.10.287.620 982 1119 2.7E-9 T 28-03-2018 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Gene3D G3DSA:1.20.5.170 624 822 0.06 T 28-03-2018 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Gene3D G3DSA:1.10.287.510 498 602 4.6E-5 T 28-03-2018 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 SUPERFAMILY SSF52540 22 224 7.23E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Pfam PF13558 Putative exonuclease SbcCD, C subunit 1336 1424 7.3E-15 T 28-03-2018 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Pfam PF04310 MukB N-terminal 2 227 3.3E-124 T 28-03-2018 IPR007406 MukB, N-terminal domain GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 PIRSF PIRSF005246 1 1486 0.0 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Pfam PF16330 MukB hinge domain 645 810 3.0E-74 T 28-03-2018 IPR032520 MukB, hinge domain CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Hamap MF_01800 Chromosome partition protein MukB [mukB]. 1 1471 11.307 T 28-03-2018 IPR012090 Chromosome partition protein MukB GO:0003677|GO:0005524|GO:0007059|GO:0009295|GO:0030261 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 Gene3D G3DSA:3.40.50.300 1154 1436 9.1E-6 T 28-03-2018 CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 SUPERFAMILY SSF52540 1268 1433 1.25E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09115 ee9ee1ddef3e6ef988090864d2d63dd7 1486 SUPERFAMILY SSF52540 21 55 1.25E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 SMART SM00304 212 264 1.8E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 Gene3D G3DSA:1.10.287.950 314 516 8.1E-52 T 28-03-2018 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 324 480 6.2E-54 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 SMART SM00319 44 178 4.5E-41 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 Pfam PF02203 Tar ligand binding domain homologue 1 168 1.2E-46 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 Gene3D G3DSA:1.20.120.30 38 172 6.0E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 SUPERFAMILY SSF47170 25 175 3.14E-35 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 SMART SM00283 265 512 1.7E-96 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 SUPERFAMILY SSF58104 232 513 5.1E-74 T 28-03-2018 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 4.1E-76 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 4.1E-76 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 53 68 4.1E-76 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.1E-76 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 4.1E-76 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15495 3a62bf38ac4b3a2c4ead3fecbab52935 533 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 4.1E-76 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12815 27f559bd1896d1331934c8f5411fb2fc 133 Pfam PF00581 Rhodanese-like domain 42 123 1.1E-8 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS12815 27f559bd1896d1331934c8f5411fb2fc 133 ProSitePatterns PS00380 Rhodanese signature 1. 55 66 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CI104_RS12815 27f559bd1896d1331934c8f5411fb2fc 133 Gene3D G3DSA:3.40.250.10 12 130 2.0E-18 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS12815 27f559bd1896d1331934c8f5411fb2fc 133 SUPERFAMILY SSF52821 24 129 2.88E-20 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS12815 27f559bd1896d1331934c8f5411fb2fc 133 SMART SM00450 29 127 2.9E-5 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS10475 f79ac812b44a1454c86f98320ffa6f60 317 SUPERFAMILY SSF64518 1 315 5.89E-61 T 28-03-2018 CI104_RS10475 f79ac812b44a1454c86f98320ffa6f60 317 Gene3D G3DSA:1.20.1330.10 38 291 1.5E-23 T 28-03-2018 CI104_RS10475 f79ac812b44a1454c86f98320ffa6f60 317 TIGRFAM TIGR02550 flagell_flgL: flagellar hook-associated protein 3 2 192 3.6E-71 T 28-03-2018 IPR013384 Flagellar hook-associated protein 3 GO:0009424|GO:0071973 CI104_RS10475 f79ac812b44a1454c86f98320ffa6f60 317 Pfam PF00669 Bacterial flagellin N-terminal helical region 3 141 2.3E-33 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CI104_RS06405 77123a59698b3a36b0dea572a225e9fb 105 SUPERFAMILY SSF82657 1 89 4.71E-30 T 28-03-2018 IPR002634 BolA protein CI104_RS06405 77123a59698b3a36b0dea572a225e9fb 105 Pfam PF01722 BolA-like protein 11 84 8.2E-28 T 28-03-2018 IPR002634 BolA protein CI104_RS06405 77123a59698b3a36b0dea572a225e9fb 105 Gene3D G3DSA:3.30.300.90 1 91 4.5E-27 T 28-03-2018 CI104_RS06405 77123a59698b3a36b0dea572a225e9fb 105 PIRSF PIRSF003113 1 100 2.0E-32 T 28-03-2018 IPR002634 BolA protein CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 Gene3D G3DSA:3.40.50.150 4 275 1.1E-32 T 28-03-2018 CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 12 28 3.0E-11 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 33 47 3.0E-11 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 179 191 3.0E-11 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 53 66 3.0E-11 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 SUPERFAMILY SSF53335 7 265 1.08E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 12 224 3.0E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS09400 ad397410f9342f84df9dc5b7aa9bca48 278 PIRSF PIRSF000398 3 271 3.1E-40 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CI104_RS03915 ea8941e6ff4324797d7827cae39ae715 245 Gene3D G3DSA:3.40.1130.10 48 244 1.7E-39 T 28-03-2018 CI104_RS03915 ea8941e6ff4324797d7827cae39ae715 245 SMART SM00563 67 182 1.2E-39 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS03915 ea8941e6ff4324797d7827cae39ae715 245 TIGRFAM TIGR00530 AGP_acyltrn: 1-acylglycerol-3-phosphate O-acyltransferases 50 180 5.0E-51 T 28-03-2018 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase GO:0003841|GO:0008654|GO:0016020 KEGG: 00561+2.3.1.51|KEGG: 00564+2.3.1.51|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7417|MetaCyc: PWY-7587|MetaCyc: PWY-7589|MetaCyc: PWY-7782|Reactome: R-HSA-1483166 CI104_RS03915 ea8941e6ff4324797d7827cae39ae715 245 Pfam PF01553 Acyltransferase 54 180 4.6E-32 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS03915 ea8941e6ff4324797d7827cae39ae715 245 SUPERFAMILY SSF69593 2 240 6.02E-61 T 28-03-2018 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 4 569 2.3E-280 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 431 450 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 Gene3D G3DSA:3.40.50.970 356 558 3.8E-52 T 28-03-2018 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 SUPERFAMILY SSF52518 2 174 2.02E-63 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 5 166 2.2E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 Gene3D G3DSA:3.40.50.970 1 184 2.4E-65 T 28-03-2018 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 196 331 1.7E-47 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 SUPERFAMILY SSF52467 189 362 1.11E-63 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 Gene3D G3DSA:3.40.50.1220 191 355 9.9E-55 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 SUPERFAMILY SSF52518 371 567 3.4E-68 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS04840 a57f9953aeea383a4cdf6b02a198f929 574 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 394 545 1.9E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 SUPERFAMILY SSF64288 63 240 4.87E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 Gene3D G3DSA:3.40.1410.10 80 241 2.5E-32 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 SUPERFAMILY SSF46785 8 83 8.88E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 7.8E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 7.8E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 Gene3D G3DSA:1.10.10.10 1 76 2.3E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 SMART SM00866 96 236 3.0E-25 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 SMART SM00345 17 75 1.1E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 75 5.8E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 Pfam PF07702 UTRA domain 96 235 1.0E-29 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS23080 8d1a38f03d08c94ecaaeb1d680147188 241 TIGRFAM TIGR02325 C_P_lyase_phnF: phosphonate metabolism transcriptional regulator PhnF 6 241 9.7E-98 T 28-03-2018 IPR012702 Phosphonate C-P lyase system, transcriptional regulator PhnF CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 PIRSF PIRSF006809 3 421 2.1E-151 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 SUPERFAMILY SSF54980 365 420 1.22E-13 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 Pfam PF01926 50S ribosome-binding GTPase 200 318 5.5E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 200 220 6.1E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 221 239 6.1E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 267 285 6.1E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 TIGRFAM TIGR03156 GTP_HflX: GTP-binding protein HflX 10 361 9.8E-155 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 Pfam PF13167 GTP-binding GTPase N-terminal 25 112 1.0E-30 T 28-03-2018 IPR025121 GTPase HflX, N-terminal CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 Gene3D G3DSA:3.40.50.300 157 401 1.8E-27 T 28-03-2018 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 Hamap MF_00900 GTPase HflX [hflX]. 27 390 47.028 T 28-03-2018 IPR016496 GTPase HflX GO:0005525 CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 SUPERFAMILY SSF52540 197 373 7.39E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22530 fceb3c1acfa9d2d6538b08d767048b64 426 Pfam PF16360 GTP-binding GTPase Middle Region 114 192 1.2E-29 T 28-03-2018 IPR032305 GTP-binding protein, middle domain CI104_RS12305 31584329af8bbd94a9ecb7a0cd61c97b 101 Pfam PF08803 Putative mono-oxygenase ydhR 4 98 5.4E-39 T 28-03-2018 IPR014910 Putative monooxygenase YdhR CI104_RS12305 31584329af8bbd94a9ecb7a0cd61c97b 101 SUPERFAMILY SSF54909 3 96 5.21E-33 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS07300 fd470f2f39de7eeb39983f277a763b70 377 Gene3D G3DSA:1.10.287.210 214 312 2.8E-28 T 28-03-2018 CI104_RS07300 fd470f2f39de7eeb39983f277a763b70 377 Gene3D G3DSA:3.30.1890.10 53 213 5.9E-36 T 28-03-2018 CI104_RS07300 fd470f2f39de7eeb39983f277a763b70 377 SUPERFAMILY SSF160355 65 329 1.96E-78 T 28-03-2018 CI104_RS07300 fd470f2f39de7eeb39983f277a763b70 377 Pfam PF02706 Chain length determinant protein 25 122 9.5E-20 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CI104_RS28275 73b9fa0ed94d556b48c8fb4f290d8260 161 Pfam PF01464 Transglycosylase SLT domain 22 137 5.2E-23 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS28275 73b9fa0ed94d556b48c8fb4f290d8260 161 SUPERFAMILY SSF53955 18 141 1.21E-29 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS28275 73b9fa0ed94d556b48c8fb4f290d8260 161 Gene3D G3DSA:1.10.530.10 15 160 1.9E-21 T 28-03-2018 CI104_RS24700 d7278857b987514a61823edc956a98fd 201 Pfam PF02036 SCP-2 sterol transfer family 15 112 9.1E-21 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS24700 d7278857b987514a61823edc956a98fd 201 Gene3D G3DSA:3.30.1050.10 13 125 2.1E-5 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS24700 d7278857b987514a61823edc956a98fd 201 SUPERFAMILY SSF55718 10 111 2.47E-7 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS02760 e2db7164e86166da1bff8353991fbcfb 419 Gene3D G3DSA:3.65.10.10 21 219 9.0E-52 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CI104_RS02760 e2db7164e86166da1bff8353991fbcfb 419 TIGRFAM TIGR01072 murA: UDP-N-acetylglucosamine 1-carboxyvinyltransferase 1 415 6.2E-185 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS02760 e2db7164e86166da1bff8353991fbcfb 419 SUPERFAMILY SSF55205 1 417 1.19E-147 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CI104_RS02760 e2db7164e86166da1bff8353991fbcfb 419 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 6 406 6.7E-131 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CI104_RS02760 e2db7164e86166da1bff8353991fbcfb 419 Hamap MF_00111 UDP-N-acetylglucosamine 1-carboxyvinyltransferase [murA]. 1 416 44.41 T 28-03-2018 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase GO:0008760|GO:0019277 KEGG: 00520+2.5.1.7|KEGG: 00550+2.5.1.7|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS02760 e2db7164e86166da1bff8353991fbcfb 419 Gene3D G3DSA:3.65.10.10 220 418 2.5E-49 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 Pfam PF00005 ABC transporter 505 650 1.5E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 SUPERFAMILY SSF90123 155 466 1.05E-52 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 Gene3D G3DSA:3.90.70.10 19 134 7.3E-7 T 28-03-2018 CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 Gene3D G3DSA:3.40.50.300 480 713 2.0E-54 T 28-03-2018 CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 TIGRFAM TIGR03375 type_I_sec_LssB: type I secretion system ATPase 19 711 1.4E-233 T 28-03-2018 IPR017750 ATPase, type I secretion system CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 SMART SM00382 510 703 1.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 SUPERFAMILY SSF52540 474 703 5.94E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 Pfam PF00664 ABC transporter transmembrane region 172 435 2.4E-24 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS19235 9c026436067468a63a4619486f86f3c6 728 Gene3D G3DSA:1.20.1560.10 140 469 2.3E-38 T 28-03-2018 CI104_RS08540 844c4cb503d1e2f04fe8585ecc9c7e12 271 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 28-03-2018 CI104_RS08540 844c4cb503d1e2f04fe8585ecc9c7e12 271 SUPERFAMILY SSF56784 1 262 1.2E-61 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08540 844c4cb503d1e2f04fe8585ecc9c7e12 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 232 3.2E-20 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS08540 844c4cb503d1e2f04fe8585ecc9c7e12 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.5E-50 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08540 844c4cb503d1e2f04fe8585ecc9c7e12 271 Gene3D G3DSA:3.40.50.1000 1 268 3.7E-33 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08540 844c4cb503d1e2f04fe8585ecc9c7e12 271 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 1.1E-61 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 Gene3D G3DSA:3.40.50.920 176 317 9.4E-39 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 SMART SM00861 13 178 7.6E-23 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 Pfam PF02780 Transketolase, C-terminal domain 189 309 6.9E-32 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 Pfam PF02779 Transketolase, pyrimidine binding domain 12 170 1.9E-20 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 SUPERFAMILY SSF52518 10 177 1.61E-35 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 Gene3D G3DSA:3.40.50.970 1 175 6.1E-34 T 28-03-2018 CI104_RS17605 e82d6f35b711bfb39f60b798d5489bca 317 SUPERFAMILY SSF52922 185 317 2.09E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS15585 67c681b5840230696e09696f824eb617 504 SUPERFAMILY SSF52540 273 484 4.26E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15585 67c681b5840230696e09696f824eb617 504 Gene3D G3DSA:3.40.50.300 261 497 2.0E-34 T 28-03-2018 CI104_RS15585 67c681b5840230696e09696f824eb617 504 Gene3D G3DSA:3.40.50.300 1 246 3.0E-50 T 28-03-2018 CI104_RS15585 67c681b5840230696e09696f824eb617 504 SUPERFAMILY SSF52540 6 232 1.13E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15585 67c681b5840230696e09696f824eb617 504 SMART SM00382 32 220 8.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS15585 67c681b5840230696e09696f824eb617 504 SMART SM00382 281 476 0.0013 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS15585 67c681b5840230696e09696f824eb617 504 Pfam PF00005 ABC transporter 23 172 1.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS15585 67c681b5840230696e09696f824eb617 504 Pfam PF00005 ABC transporter 275 427 2.6E-17 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS15585 67c681b5840230696e09696f824eb617 504 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 TIGRFAM TIGR01390 CycNucDiestase: 2',3'-cyclic-nucleotide 2'-phosphodiesterase 22 647 0.0 T 28-03-2018 IPR006294 2',3'-cyclic-nucleotide 2'-phosphodiesterase/3'-nucleotidase GO:0008663|GO:0009117 KEGG: 00230+3.1.4.16+3.1.3.6|KEGG: 00240+3.1.4.16+3.1.3.6 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 Pfam PF02872 5'-nucleotidase, C-terminal domain 355 550 1.2E-22 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 Gene3D G3DSA:3.60.21.10 13 352 1.4E-77 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 SUPERFAMILY SSF56300 19 353 5.43E-86 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 ProSitePatterns PS00785 5'-nucleotidase signature 1. 24 36 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 Pfam PF00149 Calcineurin-like phosphoesterase 24 259 9.5E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 Gene3D G3DSA:3.90.780.10 353 605 1.1E-50 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 PRINTS PR01607 Apyrase family signature 530 549 3.9E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 PRINTS PR01607 Apyrase family signature 428 451 3.9E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 PRINTS PR01607 Apyrase family signature 283 303 3.9E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 PRINTS PR01607 Apyrase family signature 22 40 3.9E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 PRINTS PR01607 Apyrase family signature 215 232 3.9E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 PRINTS PR01607 Apyrase family signature 243 266 3.9E-32 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS22360 3a38608d4959d3ef9c1d6a1699112f2a 647 SUPERFAMILY SSF55816 355 597 2.22E-39 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 Hamap MF_00534 Asparagine--tRNA ligase [asnS]. 7 469 45.624 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 Gene3D G3DSA:3.30.930.10 126 469 2.3E-93 T 28-03-2018 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 224 237 3.9E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 384 400 3.9E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 424 438 3.9E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 PRINTS PR01042 Aspartyl-tRNA synthetase signature 208 220 3.9E-14 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 Gene3D G3DSA:2.40.50.140 11 106 3.3E-17 T 28-03-2018 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 Pfam PF01336 OB-fold nucleic acid binding domain 20 99 1.7E-12 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 TIGRFAM TIGR00457 asnS: asparagine--tRNA ligase 6 469 5.9E-208 T 28-03-2018 IPR004522 Asparagine-tRNA ligase GO:0000166|GO:0004816|GO:0005524|GO:0005737|GO:0006421 KEGG: 00970+6.1.1.22 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 SUPERFAMILY SSF50249 16 101 1.2E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 Pfam PF00152 tRNA synthetases class II (D, K and N) 119 463 3.5E-82 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS09150 bf55fa5633fc3e605018c122f51bd525 469 SUPERFAMILY SSF55681 96 468 6.77E-94 T 28-03-2018 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 SMART SM00729 147 367 1.4E-63 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 Pfam PF04055 Radical SAM superfamily 151 325 4.4E-27 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 Hamap MF_01864 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase [miaB]. 3 440 75.045 T 28-03-2018 IPR006463 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase MiaB GO:0005737|GO:0006400|GO:0016740|GO:0051539 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 Gene3D G3DSA:3.80.30.20 144 381 1.1E-52 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 Gene3D G3DSA:3.40.50.280 39 127 0.32 T 28-03-2018 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 TIGRFAM TIGR01574 miaB-methiolase: tRNA-i(6)A37 thiotransferase enzyme MiaB 4 440 2.6E-221 T 28-03-2018 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 Pfam PF01938 TRAM domain 378 440 2.4E-19 T 28-03-2018 IPR002792 TRAM domain CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 151 171 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 4 437 1.6E-158 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 SUPERFAMILY SSF102114 127 372 2.35E-63 T 28-03-2018 CI104_RS07625 72100765b87ba8ff9446f05a2f3e5c03 474 Pfam PF00919 Uncharacterized protein family UPF0004 4 104 4.6E-29 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CI104_RS28185 4f55e8c8358abbdc131a461aad7e274c 669 Gene3D G3DSA:3.90.1530.10 25 133 2.7E-19 T 28-03-2018 CI104_RS28185 4f55e8c8358abbdc131a461aad7e274c 669 SUPERFAMILY SSF110849 37 135 5.41E-15 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS28185 4f55e8c8358abbdc131a461aad7e274c 669 Pfam PF02195 ParB-like nuclease domain 38 132 5.6E-12 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS28185 4f55e8c8358abbdc131a461aad7e274c 669 Gene3D G3DSA:1.10.10.730 134 180 2.4E-8 T 28-03-2018 CI104_RS28185 4f55e8c8358abbdc131a461aad7e274c 669 SMART SM00470 37 133 1.0E-18 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS28185 4f55e8c8358abbdc131a461aad7e274c 669 SUPERFAMILY SSF109709 126 220 1.31E-18 T 28-03-2018 CI104_RS16250 5688861f90339a63f64a5b215d39d87f 461 SUPERFAMILY SSF53720 32 452 2.23E-60 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS16250 5688861f90339a63f64a5b215d39d87f 461 PIRSF PIRSF036410 1 461 1.2E-210 T 28-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CI104_RS16250 5688861f90339a63f64a5b215d39d87f 461 Pfam PF00171 Aldehyde dehydrogenase family 33 289 7.9E-27 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS16250 5688861f90339a63f64a5b215d39d87f 461 Gene3D G3DSA:3.40.309.10 252 422 3.3E-22 T 28-03-2018 CI104_RS16250 5688861f90339a63f64a5b215d39d87f 461 Gene3D G3DSA:3.40.605.10 29 251 7.3E-35 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 Gene3D G3DSA:2.40.50.100 60 116 4.2E-15 T 28-03-2018 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 Gene3D G3DSA:2.40.50.100 223 350 4.9E-6 T 28-03-2018 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 72 92 4.8E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 343 358 4.8E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 Pfam PF00529 HlyD membrane-fusion protein of T1SS 38 352 1.4E-9 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 Gene3D G3DSA:1.10.287.470 117 191 0.15 T 28-03-2018 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 Gene3D G3DSA:1.10.287.470 192 222 0.5 T 28-03-2018 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 303 1.4E-17 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 SUPERFAMILY SSF111369 62 109 6.54E-11 T 28-03-2018 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 SUPERFAMILY SSF111369 145 190 6.54E-11 T 28-03-2018 CI104_RS13625 2aca42e3edcccf247d004e3d6eb15816 360 SUPERFAMILY SSF111369 202 305 2.48E-12 T 28-03-2018 CI104_RS08655 3c776df08dd8b24a50506da123f64df2 159 Pfam PF05638 Type VI secretion system effector, Hcp 6 142 1.8E-28 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS08655 3c776df08dd8b24a50506da123f64df2 159 Gene3D G3DSA:2.30.110.20 1 159 8.8E-42 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS08655 3c776df08dd8b24a50506da123f64df2 159 SUPERFAMILY SSF141452 3 156 7.06E-37 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS08655 3c776df08dd8b24a50506da123f64df2 159 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 155 6.5E-37 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 Pfam PF08402 TOBE domain 273 344 1.4E-9 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 SUPERFAMILY SSF50331 240 344 4.62E-14 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 Pfam PF00005 ABC transporter 23 164 1.6E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 Gene3D G3DSA:2.40.50.140 276 337 7.4E-7 T 28-03-2018 CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 SUPERFAMILY SSF52540 7 245 1.19E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 Gene3D G3DSA:3.40.50.300 2 241 2.8E-77 T 28-03-2018 CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 SMART SM00382 31 214 5.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05940 892e39cf9ef843ed6f20614ea05edada 348 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 SUPERFAMILY SSF56801 4 622 3.4E-154 T 28-03-2018 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Gene3D G3DSA:3.40.50.980 240 398 9.8E-34 T 28-03-2018 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Gene3D G3DSA:3.30.300.30 494 607 1.9E-22 T 28-03-2018 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Pfam PF13193 AMP-binding enzyme C-terminal domain 509 592 1.7E-21 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 TIGRFAM TIGR02316 propion_prpE: propionate--CoA ligase 1 628 0.0 T 28-03-2018 IPR012694 Propionate--CoA ligase GO:0019629|GO:0050218 KEGG: 00640+6.2.1.17|MetaCyc: PWY-3941|MetaCyc: PWY-5104|MetaCyc: PWY-5747 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Gene3D G3DSA:2.30.38.10 399 493 3.5E-10 T 28-03-2018 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Pfam PF00501 AMP-binding enzyme 59 500 5.5E-81 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 ProSitePatterns PS00455 Putative AMP-binding domain signature. 237 248 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 4 57 5.9E-22 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CI104_RS05905 a9f51a50a7d5613b8f91d018d5bd74a8 628 Gene3D G3DSA:3.40.50.980 49 239 3.4E-40 T 28-03-2018 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 37 55 9.5E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 23 37 9.5E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 Gene3D G3DSA:1.10.10.10 1 57 2.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 Gene3D G3DSA:3.40.50.1360 67 235 2.4E-28 T 28-03-2018 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 Pfam PF08220 DeoR-like helix-turn-helix domain 5 56 2.8E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 SUPERFAMILY SSF46785 4 57 1.85E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 SMART SM00420 5 57 2.3E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 Pfam PF00455 DeoR C terminal sensor domain 76 233 9.9E-43 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 ProSitePatterns PS00894 DeoR-type HTH domain signature. 5 39 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 SMART SM01134 74 234 8.9E-49 T 28-03-2018 CI104_RS20175 a406f28b59bd63d81a38ab39736a4a0a 236 SUPERFAMILY SSF100950 76 233 1.36E-27 T 28-03-2018 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 Pfam PF02887 Pyruvate kinase, alpha/beta domain 363 477 1.2E-28 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 Gene3D G3DSA:3.40.1380.20 328 480 1.2E-41 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 SUPERFAMILY SSF51621 171 344 8.03E-86 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 SUPERFAMILY SSF51621 4 79 8.03E-86 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 SUPERFAMILY SSF50800 74 168 1.74E-24 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 ProSitePatterns PS00110 Pyruvate kinase active site signature. 218 230 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 6 479 1.3E-173 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 Gene3D G3DSA:3.20.20.60 175 327 1.8E-53 T 28-03-2018 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 Gene3D G3DSA:3.20.20.60 6 174 3.3E-35 T 28-03-2018 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 SUPERFAMILY SSF52935 329 479 5.23E-39 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 250 274 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 275 299 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 300 318 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 223 249 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 63 79 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 190 204 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 PRINTS PR01050 Pyruvate kinase family signature 319 335 5.7E-51 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS15330 7af1f12c1eafe1d0d2847a31aa2a3b3b 480 Pfam PF00224 Pyruvate kinase, barrel domain 6 344 1.4E-130 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS07950 8c07277fca17436ae2b5d6b874f108b0 258 Pfam PF01261 Xylose isomerase-like TIM barrel 21 218 2.8E-28 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS07950 8c07277fca17436ae2b5d6b874f108b0 258 SUPERFAMILY SSF51658 1 258 2.74E-74 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS07950 8c07277fca17436ae2b5d6b874f108b0 258 Gene3D G3DSA:3.20.20.150 1 258 1.3E-50 T 28-03-2018 CI104_RS07950 8c07277fca17436ae2b5d6b874f108b0 258 PIRSF PIRSF006241 1 258 8.5E-85 T 28-03-2018 IPR026040 Hydroxypyruvate isomerase-like KEGG: 00630+5.3.1.22 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 Hamap MF_00001 Aspartate carbamoyltransferase [pyrB]. 7 307 37.92 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 49 56 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 39 61 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 79 88 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 226 235 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 134 151 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 286 300 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00101 Aspartate carbamoyltransferase signature 264 269 3.6E-36 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 Gene3D G3DSA:3.40.50.1370 1 146 2.2E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.4E-47 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 49 68 4.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 4.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 270 293 4.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 260 269 4.5E-25 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 SUPERFAMILY SSF53671 4 306 1.2E-99 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 155 303 9.6E-28 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 TIGRFAM TIGR00670 asp_carb_tr: aspartate carbamoyltransferase 8 305 1.3E-124 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22085 9f82164b4515f9bfaf726ca64ee9f8ab 311 Gene3D G3DSA:3.40.50.1370 147 292 3.6E-48 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 229 8.3E-62 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 Pfam PF01177 Asp/Glu/Hydantoin racemase 7 224 3.7E-55 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 Gene3D G3DSA:3.40.50.1860 1 117 3.8E-29 T 28-03-2018 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 SUPERFAMILY SSF53681 118 229 5.07E-30 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 Gene3D G3DSA:3.40.50.1860 118 215 3.2E-21 T 28-03-2018 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 193 203 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 79 88 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20435 eda1a4b715574150dd05f0e4d12d61fb 230 SUPERFAMILY SSF53681 1 116 2.13E-35 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS17175 cb4dc570344b47c03c1d9e4fe1762e14 87 Gene3D G3DSA:3.55.50.10 7 76 6.7E-5 T 28-03-2018 CI104_RS17175 cb4dc570344b47c03c1d9e4fe1762e14 87 Pfam PF03927 NapD protein 5 81 2.6E-26 T 28-03-2018 IPR005623 Chaperone NapD, nitrate reductase assembly CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 Gene3D G3DSA:3.40.50.300 496 714 4.2E-31 T 28-03-2018 CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 Pfam PF02706 Chain length determinant protein 16 107 1.7E-21 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 Pfam PF13807 G-rich domain on putative tyrosine kinase 367 447 9.5E-31 T 28-03-2018 IPR032807 Tyrosine kinase, G-rich domain CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 TIGRFAM TIGR01007 eps_fam: capsular exopolysaccharide family 508 711 1.7E-45 T 28-03-2018 IPR005702 Exopolysaccharide synthesis protein GO:0045226 CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 SUPERFAMILY SSF52540 527 707 3.84E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 Pfam PF13614 AAA domain 538 650 3.7E-12 T 28-03-2018 IPR025669 AAA domain CI104_RS16550 47a8f27a767a2f3214e194bae36db607 720 Gene3D G3DSA:3.30.1890.10 46 423 1.1E-68 T 28-03-2018 CI104_RS00325 61b9aa7b1b57cd9ae7c8dbb32de345d2 272 Pfam PF03180 NLPA lipoprotein 34 272 4.7E-93 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS00325 61b9aa7b1b57cd9ae7c8dbb32de345d2 272 PIRSF PIRSF002854 4 272 5.0E-95 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS00325 61b9aa7b1b57cd9ae7c8dbb32de345d2 272 SUPERFAMILY SSF53850 34 272 3.73E-76 T 28-03-2018 CI104_RS00325 61b9aa7b1b57cd9ae7c8dbb32de345d2 272 Gene3D G3DSA:3.40.190.10 33 128 2.2E-16 T 28-03-2018 CI104_RS00325 61b9aa7b1b57cd9ae7c8dbb32de345d2 272 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 15 272 2.0E-148 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS00325 61b9aa7b1b57cd9ae7c8dbb32de345d2 272 Gene3D G3DSA:3.40.190.10 129 272 1.0E-46 T 28-03-2018 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 Gene3D G3DSA:2.30.130.10 250 313 6.6E-15 T 28-03-2018 IPR002478 PUA domain GO:0003723 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 Pfam PF01509 TruB family pseudouridylate synthase (N terminal domain) 33 180 2.0E-57 T 28-03-2018 IPR002501 Pseudouridine synthase II, N-terminal GO:0006396 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 Pfam PF16198 tRNA pseudouridylate synthase B C-terminal domain 181 247 4.5E-21 T 28-03-2018 IPR032819 tRNA pseudouridylate synthase B, C-terminal Reactome: R-HSA-171319|Reactome: R-HSA-6790901 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 TIGRFAM TIGR00431 TruB: tRNA pseudouridine(55) synthase 12 219 1.4E-94 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 SUPERFAMILY SSF55120 10 246 1.78E-85 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 Hamap MF_01080 tRNA pseudouridine synthase B [truB]. 11 309 18.91 T 28-03-2018 IPR014780 tRNA pseudouridine synthase II, TruB GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 Pfam PF09157 Pseudouridine synthase II TruB, C-terminal 252 309 5.3E-19 T 28-03-2018 IPR015240 tRNA pseudouridine synthase II, TruB, subfamily 1, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 SUPERFAMILY SSF88697 251 310 4.57E-14 T 28-03-2018 IPR015947 PUA-like domain CI104_RS02905 bc4361302c3d0bdbdb477c9d4dce697a 314 Gene3D G3DSA:3.30.2350.10 10 229 1.9E-81 T 28-03-2018 CI104_RS16310 1e445a234e20e884c2aeb59a316b27b6 474 Gene3D G3DSA:3.30.420.10 1 200 1.2E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS16310 1e445a234e20e884c2aeb59a316b27b6 474 Pfam PF00929 Exonuclease 12 187 3.8E-31 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS16310 1e445a234e20e884c2aeb59a316b27b6 474 SUPERFAMILY SSF53098 8 473 9.22E-137 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS16310 1e445a234e20e884c2aeb59a316b27b6 474 Pfam PF08411 Exonuclease C-terminal 211 471 1.2E-103 T 28-03-2018 IPR013620 Exodeoxyribonuclease I, C-terminal GO:0006281|GO:0008852 CI104_RS16310 1e445a234e20e884c2aeb59a316b27b6 474 SMART SM00479 9 202 0.0011 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS16310 1e445a234e20e884c2aeb59a316b27b6 474 PIRSF PIRSF000977 2 474 2.2E-199 T 28-03-2018 IPR023607 Exodeoxyribonuclease I GO:0004529 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 599 621 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 Gene3D G3DSA:3.20.70.20 122 739 5.5E-147 T 28-03-2018 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 142 219 2.7E-12 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 145 735 5.9E-178 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 SUPERFAMILY SSF51998 222 740 3.05E-168 T 28-03-2018 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 Pfam PF03477 ATP cone domain 6 92 1.7E-15 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 511 533 4.9E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 473 496 4.9E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 610 637 4.9E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 433 444 4.9E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 539 562 4.9E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 PRINTS PR01183 Ribonucleotide reductase large chain signature 298 317 4.9E-38 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 Pfam PF02867 Ribonucleotide reductase, barrel domain 223 731 1.8E-117 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17310 4dcd2e4be56f7ca93eff9f672f86dd11 761 SUPERFAMILY SSF48168 10 221 2.09E-73 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS13365 aba228f9b7cd8882e12c41fa6d7926fa 993 SUPERFAMILY SSF53067 700 825 3.79E-5 T 28-03-2018 CI104_RS13365 aba228f9b7cd8882e12c41fa6d7926fa 993 SUPERFAMILY SSF53067 560 620 3.79E-5 T 28-03-2018 CI104_RS13365 aba228f9b7cd8882e12c41fa6d7926fa 993 PIRSF PIRSF034585 1 993 0.0 T 28-03-2018 IPR009216 Virulence factor SrfB CI104_RS13365 aba228f9b7cd8882e12c41fa6d7926fa 993 Pfam PF07520 Virulence factor SrfB 1 990 0.0 T 28-03-2018 IPR009216 Virulence factor SrfB CI104_RS13365 aba228f9b7cd8882e12c41fa6d7926fa 993 Gene3D G3DSA:3.30.420.40 247 565 1.2E-4 T 28-03-2018 CI104_RS13365 aba228f9b7cd8882e12c41fa6d7926fa 993 Gene3D G3DSA:3.30.420.40 566 785 1.2E-5 T 28-03-2018 CI104_RS08600 0ae18af7035d21e5aefbfa536b0c3f76 127 ProDom PD079626 YLIH RECEPTOR STY0893 CYTOPLASMIC 1 127 8.0E-46 T 28-03-2018 IPR020359 Biofilm regulator BssR CI104_RS08600 0ae18af7035d21e5aefbfa536b0c3f76 127 Pfam PF10799 Biofilm formation protein (YliH/bssR) 1 125 2.2E-72 T 28-03-2018 IPR020359 Biofilm regulator BssR CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 Gene3D G3DSA:3.40.50.1360 64 244 7.3E-40 T 28-03-2018 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 SUPERFAMILY SSF100950 73 234 3.48E-30 T 28-03-2018 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.6E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.6E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 SUPERFAMILY SSF46785 3 76 2.67E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 Pfam PF00455 DeoR C terminal sensor domain 74 231 9.5E-55 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 Gene3D G3DSA:1.10.10.10 1 61 5.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 SMART SM00420 6 58 7.9E-27 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 SMART SM01134 72 233 7.9E-71 T 28-03-2018 CI104_RS01610 e8f6b6935fe63c3bf74da34b74321042 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 2.2E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS06395 71a47b122c1f209dc1d6c795bec86c1c 491 Pfam PF07690 Major Facilitator Superfamily 18 366 5.4E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS06395 71a47b122c1f209dc1d6c795bec86c1c 491 Gene3D G3DSA:1.20.1250.20 208 415 5.9E-18 T 28-03-2018 CI104_RS06395 71a47b122c1f209dc1d6c795bec86c1c 491 SUPERFAMILY SSF103473 15 404 6.15E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS06395 71a47b122c1f209dc1d6c795bec86c1c 491 Gene3D G3DSA:1.20.1250.20 1 200 5.3E-20 T 28-03-2018 CI104_RS06395 71a47b122c1f209dc1d6c795bec86c1c 491 TIGRFAM TIGR00901 2A0125: AmpG-like permease 25 363 2.5E-124 T 28-03-2018 IPR004752 AmpG-like permease/Acetyl-coenzyme A transporter 1 GO:0016020 Reactome: R-HSA-425397 CI104_RS27780 e14e7c3b38e994782e7dcae1c4e1531f 101 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 7 100 2.8E-22 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CI104_RS27780 e14e7c3b38e994782e7dcae1c4e1531f 101 PIRSF PIRSF003259 1 101 4.2E-54 T 28-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 CI104_RS27780 e14e7c3b38e994782e7dcae1c4e1531f 101 Pfam PF07178 TraL protein 9 100 2.4E-32 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 ProSitePatterns PS00949 Autoinducer synthase family signature. 26 51 - T 28-03-2018 IPR018311 Autoinducer synthesis, conserved site KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 SUPERFAMILY SSF55729 9 189 1.95E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 Pfam PF00765 Autoinducer synthase 17 192 1.1E-50 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 Gene3D G3DSA:3.40.630.30 6 209 2.1E-31 T 28-03-2018 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 167 184 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 98 110 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 123 144 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 42 64 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 65 83 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 145 166 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS20670 ce7b143e6f0af0c8f6ff23ff887b6cea 211 PRINTS PR01549 Autoinducer synthesis protein signature 22 41 4.8E-39 T 28-03-2018 IPR001690 Autoinducer synthase GO:0016740 KEGG: 00270+2.3.1.184|MetaCyc: PWY-6157 CI104_RS23480 a59858bb220da9aaf8026405bff0a847 408 ProSitePatterns PS01288 Uncharacterized protein family UPF0027 signature. 33 62 - T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CI104_RS23480 a59858bb220da9aaf8026405bff0a847 408 SUPERFAMILY SSF103365 14 408 9.81E-142 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CI104_RS23480 a59858bb220da9aaf8026405bff0a847 408 Pfam PF01139 tRNA-splicing ligase RtcB 33 408 1.2E-134 T 28-03-2018 IPR001233 tRNA-splicing ligase, RtcB GO:0006396|GO:0008452 Reactome: R-HSA-6784531 CI104_RS07365 cc50a557b3e5283647fd7b938840e7de 205 SMART SM00470 47 142 2.7E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS07365 cc50a557b3e5283647fd7b938840e7de 205 Pfam PF02195 ParB-like nuclease domain 48 141 6.7E-16 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS07365 cc50a557b3e5283647fd7b938840e7de 205 SUPERFAMILY SSF110849 45 175 1.26E-25 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS07365 cc50a557b3e5283647fd7b938840e7de 205 Gene3D G3DSA:3.90.1530.10 39 146 1.3E-13 T 28-03-2018 CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 259 2.6E-44 T 28-03-2018 CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 SUPERFAMILY SSF51735 1 259 6.61E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 223 243 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 175 192 3.6E-28 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 8.3E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 8.3E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 8.3E-6 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS00350 aab72113c05766ac3cd412a8d105e2cc 265 Gene3D G3DSA:3.40.50.720 1 264 6.4E-59 T 28-03-2018 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Pfam PF00301 Rubredoxin 427 472 1.3E-19 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Pfam PF00753 Metallo-beta-lactamase superfamily 34 174 9.9E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 SMART SM00849 34 210 3.6E-28 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 SUPERFAMILY SSF56281 8 285 6.42E-52 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 SUPERFAMILY SSF57802 426 476 8.41E-18 T 28-03-2018 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 PIRSF PIRSF005243 1 400 5.0E-162 T 28-03-2018 IPR016440 Rubredoxin-oxygen oxidoreductase GO:0009055|GO:0010181|GO:0016491|GO:0046872 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 PRINTS PR00163 Rubredoxin signature 426 442 2.9E-6 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 PRINTS PR00163 Rubredoxin signature 456 472 2.9E-6 T 28-03-2018 IPR024935 Rubredoxin domain GO:0005506 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Gene3D G3DSA:2.20.28.10 426 477 3.4E-19 T 28-03-2018 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Pfam PF00258 Flavodoxin 256 388 2.0E-12 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Gene3D G3DSA:3.60.15.10 1 247 1.1E-40 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 SUPERFAMILY SSF52218 251 396 2.58E-34 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Gene3D G3DSA:3.40.50.360 253 395 1.9E-20 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS19755 4f415eea3375477f951c94d98aa4d6d0 480 Hamap MF_01312 Anaerobic nitric oxide reductase flavorubredoxin [norV]. 1 476 93.691 T 28-03-2018 IPR023957 Anaerobic nitric oxide reductase flavorubredoxin GO:0005506|GO:0016966 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 TIGRFAM TIGR04415 O_hepto_targRPT: autotransporter passenger strand-loop-strand repeat 380 413 1.9E-6 T 28-03-2018 IPR030930 Adhesin of bacterial autotransporter system CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 Gene3D G3DSA:2.40.128.130 646 944 2.8E-53 T 28-03-2018 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 513 944 1.9E-103 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 SUPERFAMILY SSF103515 662 944 7.59E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 812 829 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 860 881 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 924 944 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 662 680 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 723 747 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 831 854 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 PRINTS PR01484 Pertactin virulence factor family signature 899 924 1.9E-20 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 SMART SM00869 683 933 3.3E-42 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 Gene3D G3DSA:2.160.20.20 250 622 1.6E-25 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 Pfam PF03212 Pertactin 499 616 4.2E-23 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 SUPERFAMILY SSF51126 232 617 5.65E-25 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS23580 72c5b9b24463491369243d2ec66b74d2 944 Pfam PF03797 Autotransporter beta-domain 686 922 5.0E-48 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS13075 cbd0d8af07ed87d273c50ac3a4fc36a3 195 PIRSF PIRSF026671 2 187 2.3E-54 T 28-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 CI104_RS13075 cbd0d8af07ed87d273c50ac3a4fc36a3 195 SUPERFAMILY SSF55166 6 169 1.2E-55 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS13075 cbd0d8af07ed87d273c50ac3a4fc36a3 195 Pfam PF01427 D-ala-D-ala dipeptidase 6 186 2.7E-65 T 28-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 CI104_RS13075 cbd0d8af07ed87d273c50ac3a4fc36a3 195 Gene3D G3DSA:3.30.1380.10 3 174 1.4E-49 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS13075 cbd0d8af07ed87d273c50ac3a4fc36a3 195 Hamap MF_01924 D-alanyl-D-alanine dipeptidase [ddpX]. 6 181 27.727 T 28-03-2018 IPR000755 D-alanyl-D-alanine dipeptidase GO:0005618|GO:0006508|GO:0008237|GO:0016805 MetaCyc: PWY-6454|MetaCyc: PWY-6455 CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 Pfam PF00753 Metallo-beta-lactamase superfamily 14 165 7.2E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 Hamap MF_01374 Hydroxyacylglutathione hydrolase [gloB]. 1 251 45.049 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 Gene3D G3DSA:3.60.15.10 1 251 5.9E-68 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 SMART SM00849 11 165 1.1E-36 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 PIRSF PIRSF005457 1 251 1.1E-88 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 Pfam PF16123 Hydroxyacylglutathione hydrolase C-terminus 166 251 5.5E-20 T 28-03-2018 IPR032282 Hydroxyacylglutathione hydrolase, C-terminal domain KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 SUPERFAMILY SSF56281 1 251 2.36E-66 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05515 a24c3153fd3ce31ad888359c1dd174b8 251 TIGRFAM TIGR03413 GSH_gloB: hydroxyacylglutathione hydrolase 4 251 3.6E-102 T 28-03-2018 IPR017782 Hydroxyacylglutathione hydrolase GO:0004416|GO:0019243 KEGG: 00620+3.1.2.6|MetaCyc: PWY-5386 CI104_RS07805 311af1ed64e837f21145ae1c41f496be 559 Hamap MF_00275 Potassium-transporting ATPase potassium-binding subunit [kdpA]. 2 558 34.587 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CI104_RS07805 311af1ed64e837f21145ae1c41f496be 559 TIGRFAM TIGR00680 kdpA: K+-transporting ATPase, A subunit 1 558 2.4E-286 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CI104_RS07805 311af1ed64e837f21145ae1c41f496be 559 Pfam PF03814 Potassium-transporting ATPase A subunit 12 556 1.7E-236 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CI104_RS07805 311af1ed64e837f21145ae1c41f496be 559 PIRSF PIRSF001294 1 559 5.7E-230 T 28-03-2018 IPR004623 Potassium-transporting ATPase A chain GO:0005886|GO:0006813|GO:0008556 CI104_RS07805 311af1ed64e837f21145ae1c41f496be 559 Gene3D G3DSA:1.10.287.70 5 516 0.015 T 28-03-2018 CI104_RS07730 e1e502b65d4140c4a855e99ca717d122 379 SUPERFAMILY SSF54862 21 111 8.37E-7 T 28-03-2018 CI104_RS07730 e1e502b65d4140c4a855e99ca717d122 379 SUPERFAMILY SSF103501 157 370 8.5E-33 T 28-03-2018 IPR023234 NarG-like domain CI104_RS07730 e1e502b65d4140c4a855e99ca717d122 379 Gene3D G3DSA:1.20.950.20 153 363 1.3E-30 T 28-03-2018 CI104_RS07730 e1e502b65d4140c4a855e99ca717d122 379 Gene3D G3DSA:3.30.70.20 13 101 1.1E-4 T 28-03-2018 CI104_RS07730 e1e502b65d4140c4a855e99ca717d122 379 TIGRFAM TIGR02484 CitB: CitB domain protein 17 375 9.2E-118 T 28-03-2018 IPR012830 Citrate utilization protein B CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 570 772 4.1E-98 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 SUPERFAMILY SSF54211 595 771 2.62E-59 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Pfam PF02190 ATP-dependent protease La (LON) substrate-binding domain 10 201 1.8E-42 T 28-03-2018 IPR003111 Lon, substrate-binding domain CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 PIRSF PIRSF001174 1 775 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Gene3D G3DSA:2.30.130.40 1 118 2.1E-31 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 SUPERFAMILY SSF88697 10 201 5.22E-52 T 28-03-2018 IPR015947 PUA-like domain CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 SUPERFAMILY SSF52540 313 587 2.05E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Hamap MF_01973 Lon protease [lon]. 11 772 72.504 T 28-03-2018 IPR027543 Lon protease, bacterial GO:0004176|GO:0004252|GO:0005524|GO:0006508|GO:0043565 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 352 489 1.5E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 SMART SM00382 348 492 3.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Gene3D G3DSA:1.10.4060.10 122 211 2.1E-31 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Gene3D G3DSA:1.10.8.60 491 584 4.1E-33 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 TIGRFAM TIGR00763 lon: endopeptidase La 12 771 0.0 T 28-03-2018 IPR004815 Lon protease, bacterial/eukaryotic-type GO:0004176|GO:0005524|GO:0006508 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 ProSitePatterns PS01046 ATP-dependent serine proteases, lon family, serine active site. 676 684 - T 28-03-2018 IPR008268 Peptidase S16, active site GO:0004176|GO:0004252|GO:0006508 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 SMART SM00464 10 202 2.8E-87 T 28-03-2018 IPR003111 Lon, substrate-binding domain CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 356 375 2.5E-57 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 726 744 2.5E-57 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 595 611 2.5E-57 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 673 692 2.5E-57 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 703 722 2.5E-57 T 28-03-2018 CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Gene3D G3DSA:3.30.230.10 585 772 3.0E-70 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS06430 7700a5fb89b092530cbbf10f9efa2fbf 784 Gene3D G3DSA:3.40.50.300 313 490 4.6E-30 T 28-03-2018 CI104_RS24375 10df4ce7eae88d9a2b6c9ae6e9d5edf5 70 Gene3D G3DSA:3.30.1660.10 10 70 2.6E-15 T 28-03-2018 IPR025543 Dodecin-like CI104_RS24375 10df4ce7eae88d9a2b6c9ae6e9d5edf5 70 Pfam PF07338 Protein of unknown function (DUF1471) 24 68 1.8E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS24375 10df4ce7eae88d9a2b6c9ae6e9d5edf5 70 SUPERFAMILY SSF159871 2 70 1.96E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 Gene3D G3DSA:1.20.1250.20 207 408 1.7E-20 T 28-03-2018 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 Gene3D G3DSA:1.20.1250.20 12 206 1.2E-11 T 28-03-2018 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 10 401 9.1E-109 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 SUPERFAMILY SSF103473 15 400 3.4E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 106 128 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 284 310 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 346 366 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 214 242 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 71 100 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 315 334 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 148 166 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 PRINTS PR00174 LacY proton/sugar symporter family signature 260 281 1.2E-63 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS03870 fcc037ad2cd8105afafa03db8d5d3403 422 Pfam PF01306 LacY proton/sugar symporter 8 404 8.3E-109 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS28530 8a0458cbde62558e2e1b7a4afdc1171a 187 SUPERFAMILY SSF48657 41 176 7.32E-27 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS28530 8a0458cbde62558e2e1b7a4afdc1171a 187 Pfam PF04352 ProQ/FINO family 75 176 3.4E-17 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS28530 8a0458cbde62558e2e1b7a4afdc1171a 187 SMART SM00945 65 180 1.3E-8 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS28530 8a0458cbde62558e2e1b7a4afdc1171a 187 Gene3D G3DSA:1.10.1710.10 24 182 3.8E-29 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 Pfam PF00012 Hsp70 protein 4 602 1.1E-268 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 Hamap MF_00332 Chaperone protein DnaK [dnaK]. 1 634 37.063 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 192 205 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 Gene3D G3DSA:2.60.34.10 390 531 3.8E-65 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 Gene3D G3DSA:3.30.420.40 1 196 1.7E-80 T 28-03-2018 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 SUPERFAMILY SSF100934 507 602 1.44E-29 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 SUPERFAMILY SSF53067 4 183 3.89E-65 T 28-03-2018 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 Gene3D G3DSA:1.20.1270.10 532 619 1.8E-20 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 Gene3D G3DSA:3.30.420.40 197 366 7.5E-46 T 28-03-2018 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 TIGRFAM TIGR02350 prok_dnaK: chaperone protein DnaK 3 603 2.0E-292 T 28-03-2018 IPR012725 Chaperone DnaK GO:0005524|GO:0006457|GO:0051082 Reactome: R-HSA-1268020|Reactome: R-HSA-3371453|Reactome: R-HSA-8949613 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 SUPERFAMILY SSF100920 384 539 9.94E-62 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 7 14 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 469 485 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 138 158 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 198 208 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 31 43 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 54 62 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 334 350 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 3 16 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 388 407 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 PRINTS PR00301 70kDa heat shock protein signature 365 385 8.2E-81 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 337 351 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS04510 667cbcdbb6590212fcbe4a79a06c9c71 638 SUPERFAMILY SSF53067 187 382 2.01E-68 T 28-03-2018 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PIRSF PIRSF006356 1 406 2.0E-149 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 SUPERFAMILY SSF55909 4 406 1.21E-132 T 28-03-2018 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 TIGRFAM TIGR01078 arcA: arginine deiminase 5 406 2.1E-160 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 Pfam PF02274 Amidinotransferase 18 403 1.8E-105 T 28-03-2018 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 Gene3D G3DSA:3.75.10.10 5 404 9.5E-98 T 28-03-2018 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PRINTS PR01466 Bacterial arginine deiminase signature 177 192 5.7E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PRINTS PR01466 Bacterial arginine deiminase signature 2 22 5.7E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PRINTS PR01466 Bacterial arginine deiminase signature 385 403 5.7E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PRINTS PR01466 Bacterial arginine deiminase signature 342 359 5.7E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PRINTS PR01466 Bacterial arginine deiminase signature 149 167 5.7E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 PRINTS PR01466 Bacterial arginine deiminase signature 362 376 5.7E-44 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS22045 2f36174733c537b2321af0a7ac9a00d5 406 Hamap MF_00242 Arginine deiminase [arcA]. 1 406 44.184 T 28-03-2018 IPR003876 Arginine deiminase GO:0006527|GO:0016990 KEGG: 00220+3.5.3.6|MetaCyc: PWY-4981 CI104_RS27590 e8df9a52937b0a9f40879fe5d1c692ed 84 Gene3D G3DSA:1.10.10.10 48 84 9.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27590 e8df9a52937b0a9f40879fe5d1c692ed 84 Pfam PF03811 InsA N-terminal domain 3 36 2.1E-19 T 28-03-2018 IPR003220 InsA N-terminal domain GO:0006313 CI104_RS27590 e8df9a52937b0a9f40879fe5d1c692ed 84 Pfam PF12759 InsA C-terminal domain 43 84 3.5E-27 T 28-03-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CI104_RS04560 43c733457944bf914c3c31d6e7a32a1f 316 TIGRFAM TIGR00216 ispH_lytB: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 2 284 3.3E-98 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CI104_RS04560 43c733457944bf914c3c31d6e7a32a1f 316 Pfam PF02401 LytB protein 3 282 1.3E-91 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CI104_RS04560 43c733457944bf914c3c31d6e7a32a1f 316 Gene3D G3DSA:3.40.50.1220 72 285 7.2E-4 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS04560 43c733457944bf914c3c31d6e7a32a1f 316 Hamap MF_00191 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [ispH]. 1 286 37.95 T 28-03-2018 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase GO:0019288|GO:0046872|GO:0050992|GO:0051745 KEGG: 00900+1.17.7.4|MetaCyc: PWY-7560 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 43 508 1.2E-265 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 34 510 1.4E-241 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 SUPERFAMILY SSF100950 242 508 8.38E-60 T 28-03-2018 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 Gene3D G3DSA:3.40.1080.10 241 484 1.8E-36 T 28-03-2018 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 PIRSF PIRSF009451 1 510 1.0E-265 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 SUPERFAMILY SSF100950 30 238 3.49E-73 T 28-03-2018 CI104_RS07435 6b08682b9e5f30d9943f12048b9f8535 510 Gene3D G3DSA:3.40.1080.10 2 239 4.8E-46 T 28-03-2018 CI104_RS08315 ef9a6f428218ae4ab8f9d55144261c53 161 Pfam PF01967 MoaC family 15 150 7.1E-55 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CI104_RS08315 ef9a6f428218ae4ab8f9d55144261c53 161 Hamap MF_01224_B Cyclic pyranopterin monophosphate synthase accessory protein [moaC]. 2 158 36.75 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CI104_RS08315 ef9a6f428218ae4ab8f9d55144261c53 161 Gene3D G3DSA:3.30.70.640 2 158 1.1E-68 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CI104_RS08315 ef9a6f428218ae4ab8f9d55144261c53 161 SUPERFAMILY SSF55040 11 155 1.19E-61 T 28-03-2018 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain GO:0006777 Reactome: R-HSA-947581 CI104_RS08315 ef9a6f428218ae4ab8f9d55144261c53 161 TIGRFAM TIGR00581 moaC: molybdenum cofactor biosynthesis protein C 4 152 1.3E-73 T 28-03-2018 IPR023045 Molybdenum cofactor biosynthesis C GO:0006777 Reactome: R-HSA-947581 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Pfam PF13237 4Fe-4S dicluster domain 374 427 7.2E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Hamap MF_00461 Electron transport complex subunit RsxC [rsxC]. 1 678 258.494 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Pfam PF10531 SLBB domain 296 344 1.0E-12 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 139 283 3.3E-47 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 TIGRFAM TIGR01945 rnfC: electron transport complex, RnfABCDGE type, C subunit 13 445 9.0E-179 T 28-03-2018 IPR010208 Electron transport complex, subunit RnfC/RsxC GO:0009055|GO:0016020|GO:0051539 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 SUPERFAMILY SSF142019 94 303 2.48E-60 T 28-03-2018 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Gene3D G3DSA:3.30.70.20 384 485 1.5E-16 T 28-03-2018 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 416 427 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12510 c359cac838ba88595113887b76c0046d 678 SUPERFAMILY SSF46548 336 443 1.17E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Gene3D G3DSA:3.30.70.20 285 383 0.013 T 28-03-2018 CI104_RS12510 c359cac838ba88595113887b76c0046d 678 Pfam PF13375 RnfC Barrel sandwich hybrid domain 14 115 2.2E-31 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Gene3D G3DSA:3.30.70.20 69 98 0.0033 T 28-03-2018 CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 TIGRFAM TIGR00402 napF: ferredoxin-type protein NapF 6 156 1.3E-63 T 28-03-2018 IPR004496 Ferredoxin-type protein NapF GO:0005506|GO:0009055|GO:0055114 CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Pfam PF13187 4Fe-4S dicluster domain 35 81 1.6E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 SUPERFAMILY SSF54862 33 157 1.67E-20 T 28-03-2018 CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Pfam PF12838 4Fe-4S dicluster domain 107 154 2.0E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 140 151 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Gene3D G3DSA:3.30.70.20 123 163 2.4E-8 T 28-03-2018 CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Gene3D G3DSA:3.30.70.20 15 45 0.021 T 28-03-2018 CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Gene3D G3DSA:3.30.70.20 99 122 0.18 T 28-03-2018 CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 68 79 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS17180 ad98cda99e2ca1dd1154db73c7aad7cc 163 Gene3D G3DSA:3.30.70.20 46 68 1.2E-8 T 28-03-2018 CI104_RS25575 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS25575 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25575 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25575 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26710 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26710 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26710 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26710 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26810 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26810 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26810 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26810 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27550 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS27550 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27550 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27550 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26940 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26940 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26940 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26940 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25770 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS25770 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25770 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25770 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27420 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS27420 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27420 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27420 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26490 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26490 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26490 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26490 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25600 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS25600 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25600 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25600 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19100 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS19100 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19100 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19100 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26880 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26880 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26880 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26880 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19175 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS19175 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19175 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19175 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19215 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS19215 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19215 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19215 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26325 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26325 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26325 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26325 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26920 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26920 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26920 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26920 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27335 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS27335 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27335 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27335 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28610 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS28610 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28610 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28610 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27445 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS27445 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27445 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27445 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27605 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS27605 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27605 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27605 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26750 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS26750 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26750 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26750 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27400 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS27400 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27400 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27400 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25795 a47e7568518d6227d24c732f328a36ac 234 Pfam PF13610 DDE domain 75 212 8.6E-49 T 28-03-2018 IPR032874 DDE domain CI104_RS25795 a47e7568518d6227d24c732f328a36ac 234 SUPERFAMILY SSF53098 75 191 3.29E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25795 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:3.30.420.10 72 210 1.3E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25795 a47e7568518d6227d24c732f328a36ac 234 Gene3D G3DSA:1.10.10.10 4 61 5.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 Pfam PF14821 Threonine synthase N terminus 8 80 4.6E-13 T 28-03-2018 IPR029144 Threonine synthase, N-terminal CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 Gene3D G3DSA:3.40.50.1100 101 197 3.9E-18 T 28-03-2018 CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 97 369 3.0E-23 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 TIGRFAM TIGR00260 thrC: threonine synthase 52 397 5.5E-127 T 28-03-2018 IPR004450 Threonine synthase-like CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 97 111 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 Gene3D G3DSA:3.90.1380.10 1 81 3.6E-18 T 28-03-2018 IPR029144 Threonine synthase, N-terminal CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 SUPERFAMILY SSF53686 1 425 4.98E-131 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 Gene3D G3DSA:3.40.50.1100 322 395 6.1E-13 T 28-03-2018 CI104_RS04475 848fd2042d7a7b5f8143a74c2ae8b874 428 Gene3D G3DSA:3.40.50.1100 198 319 4.9E-40 T 28-03-2018 CI104_RS04635 1dcb686be8a2cf0b732118b457a5eda9 261 Hamap MF_01051 Carnitinyl-CoA dehydratase [caiD]. 1 261 70.902 T 28-03-2018 IPR022852 Carnitinyl-CoA dehydratase GO:0016836 CI104_RS04635 1dcb686be8a2cf0b732118b457a5eda9 261 SUPERFAMILY SSF52096 2 261 3.22E-78 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS04635 1dcb686be8a2cf0b732118b457a5eda9 261 Gene3D G3DSA:3.90.226.10 4 214 1.6E-65 T 28-03-2018 CI104_RS04635 1dcb686be8a2cf0b732118b457a5eda9 261 Pfam PF00378 Enoyl-CoA hydratase/isomerase 9 260 1.1E-83 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CI104_RS04635 1dcb686be8a2cf0b732118b457a5eda9 261 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 98 118 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CI104_RS04635 1dcb686be8a2cf0b732118b457a5eda9 261 Gene3D G3DSA:1.10.12.10 215 261 1.7E-17 T 28-03-2018 IPR014748 Crontonase, C-terminal CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 SUPERFAMILY SSF52540 4 240 2.97E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 Gene3D G3DSA:3.40.718.10 408 691 1.1E-63 T 28-03-2018 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 Pfam PF01515 Phosphate acetyl/butaryl transferase 391 706 4.4E-128 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 SUPERFAMILY SSF53659 392 709 5.76E-94 T 28-03-2018 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 Pfam PF13500 AAA domain 5 229 7.7E-48 T 28-03-2018 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 406 706 3.7E-138 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 SUPERFAMILY SSF75138 229 353 3.53E-25 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 Gene3D G3DSA:3.40.50.300 1 230 3.4E-28 T 28-03-2018 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 PIRSF PIRSF006107 1 713 0.0 T 28-03-2018 IPR016475 Phosphate acetyltransferase, bacteria GO:0008959 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 Gene3D G3DSA:3.40.1390.20 231 366 4.0E-27 T 28-03-2018 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain-like CI104_RS17595 a03f6b06016e0832c1ed9bbf281af2ed 713 Pfam PF07085 DRTGG domain 233 344 1.6E-29 T 28-03-2018 IPR010766 DRTGG KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS24960 313428918a3f53941bdd499c3aa0d580 242 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 4.6E-53 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CI104_RS24960 313428918a3f53941bdd499c3aa0d580 242 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 230 3.2E-60 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 268 777 2.4E-79 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 227 778 4.5E-123 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Gene3D G3DSA:3.40.1110.10 513 660 7.3E-41 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF81653 300 396 1.83E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 695 714 5.9E-24 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 643 653 5.9E-24 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 719 731 5.9E-24 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 346 360 5.9E-24 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 497 511 5.9E-24 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Gene3D G3DSA:3.30.70.100 18 96 1.1E-7 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Gene3D G3DSA:3.30.70.100 97 178 3.3E-10 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 245 798 3.0E-177 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF55008 28 98 3.27E-11 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Pfam PF00122 E1-E2 ATPase 296 477 5.0E-56 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Gene3D G3DSA:1.20.1110.10 661 794 8.6E-24 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Gene3D G3DSA:1.20.1110.10 207 512 8.4E-39 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Pfam PF00403 Heavy-metal-associated domain 33 88 7.0E-6 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 499 505 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF81665 245 299 3.53E-16 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF81665 397 489 3.53E-16 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00941 Cadmium-transporting ATPase signature 381 395 4.0E-15 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00941 Cadmium-transporting ATPase signature 226 238 4.0E-15 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00941 Cadmium-transporting ATPase signature 280 300 4.0E-15 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00941 Cadmium-transporting ATPase signature 362 378 4.0E-15 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 PRINTS PR00941 Cadmium-transporting ATPase signature 34 43 4.0E-15 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF56784 554 795 2.41E-53 T 28-03-2018 IPR023214 HAD-like domain CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF56784 496 515 2.41E-53 T 28-03-2018 IPR023214 HAD-like domain CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 Pfam PF00702 haloacid dehalogenase-like hydrolase 495 709 3.9E-41 T 28-03-2018 CI104_RS26635 4ec5810e571081bdd4369ac1aa715df7 801 SUPERFAMILY SSF55008 100 171 4.32E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 SUPERFAMILY SSF53383 5 381 4.31E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 6 380 4.1E-142 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 PIRSF PIRSF001434 1 384 8.7E-132 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 Gene3D G3DSA:3.40.640.10 1 247 1.2E-57 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 190 204 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 TIGRFAM TIGR02080 O_succ_thio_ly: O-succinylhomoserine (thiol)-lyase 3 382 3.8E-212 T 28-03-2018 IPR011821 O-succinylhomoserine (thiol)-lyase KEGG: 00270+2.5.1.48|KEGG: 00450+2.5.1.48|KEGG: 00920+2.5.1.48|MetaCyc: PWY-801 CI104_RS24060 0a1e043a95167db7eedcca59730c8fcb 386 Gene3D G3DSA:3.90.1150.10 248 386 4.0E-49 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 PRINTS PR00315 GTP-binding elongation factor signature 2 15 1.3E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 PRINTS PR00315 GTP-binding elongation factor signature 70 81 1.3E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 PRINTS PR00315 GTP-binding elongation factor signature 54 64 1.3E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 PRINTS PR00315 GTP-binding elongation factor signature 107 116 1.3E-7 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:1.10.10.10 417 480 4.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 SUPERFAMILY SSF46785 551 607 6.91E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:2.40.30.10 282 335 3.3E-8 T 28-03-2018 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Pfam PF03144 Elongation factor Tu domain 2 189 256 1.1E-7 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Pfam PF00009 Elongation factor Tu GTP binding domain 2 163 5.5E-33 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 SUPERFAMILY SSF50447 175 293 8.44E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 SUPERFAMILY SSF50465 269 351 4.32E-7 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:3.40.50.300 50 172 2.3E-21 T 28-03-2018 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Pfam PF09107 Elongation factor SelB, winged helix 564 605 2.9E-19 T 28-03-2018 IPR015191 Translation elongation factor SelB, winged helix, type 3 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:3.40.50.300 1 49 5.7E-9 T 28-03-2018 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 SUPERFAMILY SSF46785 417 484 2.37E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 26 41 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 TIGRFAM TIGR00475 selB: selenocysteine-specific translation elongation factor 1 607 4.2E-253 T 28-03-2018 IPR004535 Translation elongation factor, selenocysteine-specific GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 SUPERFAMILY SSF52540 2 164 6.09E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Pfam PF09106 Elongation factor SelB, winged helix 424 480 1.0E-15 T 28-03-2018 IPR015190 Translation elongation factor SelB, winged helix, type 2 GO:0001514|GO:0003723|GO:0003746|GO:0005525|GO:0005737 CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:1.10.10.10 548 606 1.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:1.10.10.10 489 545 1.8E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00745 4876eac3a8e26c58ac23bfd7f659f721 615 Gene3D G3DSA:2.40.30.10 173 281 1.2E-20 T 28-03-2018 CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 Gene3D G3DSA:3.30.70.270 313 464 0.0014 T 28-03-2018 CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 SMART SM00052 492 735 7.0E-99 T 28-03-2018 IPR001633 EAL domain CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 Pfam PF05231 MASE1 15 320 1.0E-61 T 28-03-2018 IPR007895 MASE1 CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 Pfam PF00563 EAL domain 498 730 1.5E-65 T 28-03-2018 IPR001633 EAL domain CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 SUPERFAMILY SSF141868 497 738 3.79E-70 T 28-03-2018 IPR001633 EAL domain CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 SMART SM00267 318 480 9.6E-7 T 28-03-2018 IPR000160 GGDEF domain CI104_RS18490 c3823e72eba06278b7a923d034b8283a 748 Gene3D G3DSA:3.20.20.450 483 738 1.2E-73 T 28-03-2018 IPR001633 EAL domain CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 172 1.8E-16 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Pfam PF03144 Elongation factor Tu domain 2 205 275 8.0E-12 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 PRINTS PR00315 GTP-binding elongation factor signature 90 101 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 PRINTS PR00315 GTP-binding elongation factor signature 126 135 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 PRINTS PR00315 GTP-binding elongation factor signature 6 19 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 PRINTS PR00315 GTP-binding elongation factor signature 74 84 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 PRINTS PR00315 GTP-binding elongation factor signature 49 57 4.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Hamap MF_00071 Elongation factor 4 [lepA]. 1 597 306.59 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Pfam PF00009 Elongation factor Tu GTP binding domain 2 181 1.1E-52 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Pfam PF00679 Elongation factor G C-terminus 399 482 4.0E-19 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 SUPERFAMILY SSF54980 292 370 1.73E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 SUPERFAMILY SSF52540 2 235 1.15E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Gene3D G3DSA:3.30.70.240 390 549 3.6E-25 T 28-03-2018 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Gene3D G3DSA:3.30.70.870 288 367 1.2E-27 T 28-03-2018 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Gene3D G3DSA:2.40.30.10 188 287 2.9E-26 T 28-03-2018 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 SUPERFAMILY SSF54980 399 493 5.28E-24 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Pfam PF06421 GTP-binding protein LepA C-terminus 487 592 1.4E-49 T 28-03-2018 IPR013842 GTP-binding protein LepA, C-terminal CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 TIGRFAM TIGR01393 lepA: elongation factor 4 2 594 1.9E-301 T 28-03-2018 IPR006297 Elongation factor 4 GO:0005525 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 Gene3D G3DSA:3.40.50.300 1 185 2.2E-36 T 28-03-2018 CI104_RS18830 d88d0db5a393f08513865a6d4a209388 599 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 42 57 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 839 846 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 674 876 5.1E-39 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 128 334 2.7E-77 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SMART SM01096 424 547 3.9E-75 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Pfam PF02142 MGS-like domain 957 1041 7.6E-18 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 380 398 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 19 33 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 48 58 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 204 223 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 239 256 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 297 326 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 PRINTS PR00098 Carbamoyl-phosphate synthase protein CPSase domain signature 168 180 6.4E-64 T 28-03-2018 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:3.40.50.20 4 109 2.9E-40 T 28-03-2018 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Pfam PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain 427 547 3.4E-40 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:1.10.1030.10 404 538 3.6E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:3.40.50.20 539 655 2.5E-62 T 28-03-2018 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Hamap MF_01210_B Carbamoyl-phosphate synthase large chain [carB]. 1 1063 13.183 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 710 724 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:3.30.470.20 119 403 4.2E-67 T 28-03-2018 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Hamap MF_01210_A Carbamoyl-phosphate synthase large chain [carB]. 5 1068 13.389 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SUPERFAMILY SSF56059 128 401 3.36E-110 T 28-03-2018 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SUPERFAMILY SSF52440 1 127 5.61E-50 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SUPERFAMILY SSF56059 674 934 1.94E-105 T 28-03-2018 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:3.30.470.20 746 936 5.0E-44 T 28-03-2018 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SUPERFAMILY SSF52335 938 1071 7.2E-35 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SMART SM00851 956 1042 2.6E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:3.40.50.1380 937 1073 5.3E-29 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 164 178 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 TIGRFAM TIGR01369 CPSaseII_lrg: carbamoyl-phosphate synthase, large subunit 2 1053 0.0 T 28-03-2018 IPR006275 Carbamoyl-phosphate synthase, large subunit GO:0006807 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SUPERFAMILY SSF52440 557 676 3.88E-49 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 297 304 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 SUPERFAMILY SSF48108 396 554 4.58E-53 T 28-03-2018 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04620 7dc79b7cc0eb68aeda76d9f7b765611f 1074 Gene3D G3DSA:3.30.1490.20 656 745 1.3E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS03820 393595945df8f60dd689e7aa31bc12af 221 Pfam PF06693 Protein of unknown function (DUF1190) 41 208 4.4E-57 T 28-03-2018 IPR009576 Biofilm formation YgiB CI104_RS03820 393595945df8f60dd689e7aa31bc12af 221 Hamap MF_01188 UPF0441 protein YgiB [ygiB]. 1 221 36.52 T 28-03-2018 IPR009576 Biofilm formation YgiB CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 Pfam PF06418 CTP synthase N-terminus 5 266 1.5E-125 T 28-03-2018 IPR017456 CTP synthase, N-terminal GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 TIGRFAM TIGR00337 PyrG: CTP synthase 2 535 3.2E-266 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 SUPERFAMILY SSF52317 289 542 7.78E-89 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 Gene3D G3DSA:3.40.50.300 1 285 1.0E-128 T 28-03-2018 CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 Gene3D G3DSA:3.40.50.880 286 543 4.3E-77 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 SUPERFAMILY SSF52540 3 269 5.0E-122 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 Hamap MF_01227 CTP synthase [pyrG]. 3 540 51.499 T 28-03-2018 IPR004468 CTP synthase GO:0003883|GO:0006221 KEGG: 00240+6.3.4.2|MetaCyc: PWY-7176|MetaCyc: PWY-7177|MetaCyc: PWY-7185|Reactome: R-HSA-499943 CI104_RS20040 63e330843771d7e2e926941a3105e3a7 545 Pfam PF00117 Glutamine amidotransferase class-I 301 535 2.3E-65 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 Pfam PF01189 16S rRNA methyltransferase RsmB/F 120 309 3.0E-45 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 Hamap MF_01579 Ribosomal RNA small subunit methyltransferase F [rsmF]. 6 475 64.733 T 28-03-2018 IPR023545 rRNA small subunit methyltransferase F GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 SUPERFAMILY SSF53335 7 310 5.14E-67 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 189 201 3.2E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 239 255 3.2E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 122 132 3.2E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 91 105 3.2E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 293 310 3.2E-28 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 Gene3D G3DSA:3.40.50.150 101 317 6.4E-60 T 28-03-2018 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 Gene3D G3DSA:3.30.70.1170 29 100 1.5E-21 T 28-03-2018 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 Pfam PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF 8 105 8.6E-29 T 28-03-2018 IPR031341 Ribosomal RNA small subunit methyltransferase F, N-terminal KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 Pfam PF13636 RNA-binding PUA-like domain of methyltransferase RsmF 421 470 7.8E-10 T 28-03-2018 IPR027391 rRNA small subunit methyltransferase F, RNA-binding PUA-like domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 188 199 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS15235 dd2ce725ab6d400af520f56b31040a82 479 TIGRFAM TIGR00446 nop2p: NOL1/NOP2/sun family putative RNA methylase 41 310 5.6E-110 T 28-03-2018 IPR011023 Nop2p GO:0003723|GO:0006364|GO:0008757 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-6790901|Reactome: R-HSA-8869496 CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 TIGRFAM TIGR00046 TIGR00046: RNA methyltransferase, RsmE family 2 242 2.8E-93 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 Pfam PF04452 RNA methyltransferase 19 236 8.4E-74 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 Gene3D G3DSA:2.40.240.20 1 73 1.3E-22 T 28-03-2018 CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 SUPERFAMILY SSF88697 2 70 2.11E-17 T 28-03-2018 IPR015947 PUA-like domain CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 Gene3D G3DSA:3.40.1280.10 74 243 7.9E-56 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 PIRSF PIRSF015601 2 242 9.3E-52 T 28-03-2018 IPR006700 Ribosomal RNA small subunit methyltransferase E GO:0006364|GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04220 126fe27aea55e22ef8c09c44435b0efe 243 SUPERFAMILY SSF75217 75 242 2.2E-51 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS10185 109002de7e64287885b85aa052b49fe1 502 Pfam PF00474 Sodium:solute symporter family 35 437 9.8E-147 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS10185 109002de7e64287885b85aa052b49fe1 502 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 35 437 3.7E-132 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS10185 109002de7e64287885b85aa052b49fe1 502 TIGRFAM TIGR02121 Na_Pro_sym: sodium/proline symporter 6 490 2.7E-233 T 28-03-2018 IPR011851 Sodium/proline symporter GO:0005298|GO:0006814|GO:0015824|GO:0016021|GO:0031402 CI104_RS10185 109002de7e64287885b85aa052b49fe1 502 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 419 439 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS10185 109002de7e64287885b85aa052b49fe1 502 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 157 182 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 Pfam PF00571 CBS domain 153 202 0.0013 T 28-03-2018 IPR000644 CBS domain CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 Pfam PF00571 CBS domain 95 140 1.6E-8 T 28-03-2018 IPR000644 CBS domain CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 8 473 5.0E-161 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 SUPERFAMILY SSF54631 94 203 6.82E-24 T 28-03-2018 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 SMART SM00116 158 206 5.5E-7 T 28-03-2018 IPR000644 CBS domain CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 SMART SM00116 96 144 2.7E-11 T 28-03-2018 IPR000644 CBS domain CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 Hamap MF_01964 Inosine-5'-monophosphate dehydrogenase [guaB]. 8 486 84.308 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 SMART SM01240 7 473 0.0 T 28-03-2018 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 Gene3D G3DSA:3.20.20.70 1 482 3.6E-114 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 295 307 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 TIGRFAM TIGR01302 IMP_dehydrog: inosine-5'-monophosphate dehydrogenase 8 454 1.9E-198 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 SUPERFAMILY SSF51412 217 477 5.89E-127 T 28-03-2018 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 SUPERFAMILY SSF51412 1 90 5.89E-127 T 28-03-2018 CI104_RS18505 d0c17e9e2be547b19ba76d7a2afb4188 488 PIRSF PIRSF000130 1 488 8.5E-196 T 28-03-2018 IPR005990 Inosine-5'-monophosphate dehydrogenase GO:0003938|GO:0006164|GO:0055114 KEGG: 00053+1.1.1.20|KEGG: 00230+1.1.1.205|KEGG: 00983+1.1.1.205|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-7221|Reactome: R-HSA-6798695|Reactome: R-HSA-73817 CI104_RS18535 6070722dc912a3a6727627359504c6e7 206 SUPERFAMILY SSF48452 88 186 1.82E-6 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18535 6070722dc912a3a6727627359504c6e7 206 Pfam PF09976 Tetratricopeptide repeat-like domain 15 205 4.7E-55 T 28-03-2018 IPR018704 Tetratricopeptide repeat-like domain Reactome: R-HSA-192823|Reactome: R-HSA-381038|Reactome: R-HSA-381426|Reactome: R-HSA-6798695|Reactome: R-HSA-8957275 CI104_RS18535 6070722dc912a3a6727627359504c6e7 206 PIRSF PIRSF006170 1 206 1.5E-57 T 28-03-2018 IPR026039 Uncharacterised protein family UPF0070 CI104_RS18535 6070722dc912a3a6727627359504c6e7 206 Gene3D G3DSA:1.25.40.10 35 194 2.1E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 SUPERFAMILY SSF53706 35 195 3.14E-57 T 28-03-2018 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 Gene3D G3DSA:3.40.50.740 109 195 5.7E-13 T 28-03-2018 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 44 103 4.0E-19 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 Gene3D G3DSA:2.20.25.90 37 108 7.6E-21 T 28-03-2018 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 Pfam PF00384 Molybdopterin oxidoreductase 107 158 1.5E-6 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS24385 b1b7404260d3b47fae828c3c6b526bfe 195 SMART SM00926 43 104 4.9E-22 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS06165 3b8088280c64a9a1afffc8fe2be7bc17 181 Pfam PF03992 Antibiotic biosynthesis monooxygenase 7 75 5.3E-8 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CI104_RS06165 3b8088280c64a9a1afffc8fe2be7bc17 181 Gene3D G3DSA:3.30.70.100 1 100 4.4E-14 T 28-03-2018 CI104_RS06165 3b8088280c64a9a1afffc8fe2be7bc17 181 SUPERFAMILY SSF54909 3 97 6.08E-20 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 714 731 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 Gene3D G3DSA:2.170.130.10 33 186 3.9E-16 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 731 2.2E-163 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 Pfam PF07715 TonB-dependent Receptor Plug Domain 77 176 2.3E-12 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 Pfam PF00593 TonB dependent receptor 281 730 3.5E-52 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 Gene3D G3DSA:2.40.170.20 189 731 4.8E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 SUPERFAMILY SSF56935 38 731 6.41E-119 T 28-03-2018 CI104_RS10580 83dfa98d33289b14a3ae74aeb7d902d7 731 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 49 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.3E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 SMART SM00354 1 71 5.0E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 SUPERFAMILY SSF47413 2 59 1.59E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.0E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.0E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 Gene3D G3DSA:1.10.260.40 2 53 2.0E-20 T 28-03-2018 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 Pfam PF13377 Periplasmic binding protein-like domain 162 293 1.0E-8 T 28-03-2018 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 Gene3D G3DSA:3.40.50.2300 54 164 2.4E-10 T 28-03-2018 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 Gene3D G3DSA:3.40.50.2300 165 299 1.3E-13 T 28-03-2018 CI104_RS00270 221d751ba22030646c7d2b22ffdb2ae5 318 SUPERFAMILY SSF53822 59 296 6.54E-18 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 2 13 4.0E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 26 4.0E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 37 57 4.0E-8 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 Pfam PF13411 MerR HTH family regulatory protein 2 67 6.3E-17 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 SUPERFAMILY SSF46955 2 126 5.19E-34 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 SMART SM00422 1 70 4.8E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 ProSitePatterns PS00552 MerR-type HTH domain signature. 4 26 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 Gene3D G3DSA:1.10.1660.10 1 55 2.5E-19 T 28-03-2018 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 TIGRFAM TIGR02044 CueR: Cu(I)-responsive transcriptional regulator 1 126 1.8E-61 T 28-03-2018 IPR011789 Cu(I)-responsive transcriptional regulator GO:0003677|GO:0003700|GO:0005507|GO:0045893 CI104_RS06895 3f3977d4cf338837292c3044cb9dd919 136 Gene3D G3DSA:1.10.1660.10 56 135 1.0E-15 T 28-03-2018 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 SUPERFAMILY SSF53383 929 951 2.36E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 SUPERFAMILY SSF53383 480 889 2.36E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Hamap MF_00711 Glycine dehydrogenase (decarboxylating) [gcvP]. 8 956 25.561 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Gene3D G3DSA:3.90.1150.10 343 442 1.1E-22 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 TIGRFAM TIGR00461 gcvP: glycine dehydrogenase 17 950 0.0 T 28-03-2018 IPR003437 Glycine dehydrogenase (decarboxylating) GO:0004375|GO:0006544|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Gene3D G3DSA:3.90.1150.10 775 907 1.0E-44 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 SUPERFAMILY SSF53383 17 440 3.93E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Pfam PF02347 Glycine cleavage system P-protein 16 440 2.0E-191 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Pfam PF02347 Glycine cleavage system P-protein 481 739 2.2E-8 T 28-03-2018 IPR020581 Glycine cleavage system P protein GO:0004375|GO:0006546|GO:0055114 KEGG: 00260+1.4.4.2|Reactome: R-HSA-6783984 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Gene3D G3DSA:3.40.640.10 96 342 1.7E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS21065 51a923cd0431004a1bd9640d3b70338c 957 Gene3D G3DSA:3.40.640.10 530 774 9.2E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 852 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 SUPERFAMILY SSF53732 380 855 3.27E-139 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Gene3D G3DSA:3.30.499.10 402 521 5.4E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 ProSitePatterns PS01244 Aconitase family signature 2. 760 773 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 PIRSF PIRSF036687 1 858 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Gene3D G3DSA:3.30.499.10 683 864 5.0E-46 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Gene3D G3DSA:3.40.1060.10 522 682 4.3E-26 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 SUPERFAMILY SSF74778 1 160 4.45E-56 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Pfam PF11791 Aconitate B N-terminal domain 4 156 3.7E-55 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Gene3D G3DSA:3.20.19.10 162 363 9.1E-31 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Pfam PF06434 Aconitate hydratase 2 N-terminus 169 382 1.1E-90 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 SUPERFAMILY SSF52016 161 372 4.97E-65 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS19375 c02680f7e26df4a346c3fe05169b9e06 869 Pfam PF00330 Aconitase family (aconitate hydratase) 470 817 3.7E-39 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 Gene3D G3DSA:3.40.190.10 89 173 4.0E-14 T 28-03-2018 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 5.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 5.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 5.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 SUPERFAMILY SSF53850 90 297 6.05E-48 T 28-03-2018 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 SUPERFAMILY SSF46785 4 84 6.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 2.5E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 Pfam PF03466 LysR substrate binding domain 89 292 1.8E-44 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 Gene3D G3DSA:3.40.190.10 174 262 8.0E-24 T 28-03-2018 CI104_RS01120 6a56bebca8c91043becc4fd9de623aec 299 Gene3D G3DSA:1.10.10.10 3 81 6.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10350 2fccfe44a75f3cf1f8213770c0eed59e 373 Pfam PF01266 FAD dependent oxidoreductase 4 352 4.9E-45 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CI104_RS10350 2fccfe44a75f3cf1f8213770c0eed59e 373 SUPERFAMILY SSF51905 2 217 4.4E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10350 2fccfe44a75f3cf1f8213770c0eed59e 373 SUPERFAMILY SSF51905 314 371 4.4E-46 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10350 2fccfe44a75f3cf1f8213770c0eed59e 373 SUPERFAMILY SSF54373 213 314 7.45E-18 T 28-03-2018 CI104_RS10350 2fccfe44a75f3cf1f8213770c0eed59e 373 Gene3D G3DSA:3.50.50.60 1 373 7.3E-38 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10350 2fccfe44a75f3cf1f8213770c0eed59e 373 Hamap MF_00515 N-methyl-L-tryptophan oxidase [solA]. 1 372 76.235 T 28-03-2018 IPR023493 N-methyl-L-tryptophan oxidase MTOX GO:0050131|GO:0050660|GO:0055114 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Pfam PF11798 IMS family HHH motif 166 197 1.0E-8 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Hamap MF_01113 DNA polymerase IV [dinB]. 1 349 37.047 T 28-03-2018 IPR022880 DNA polymerase IV GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Pfam PF00817 impB/mucB/samB family 7 154 2.5E-49 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Gene3D G3DSA:1.10.150.20 171 242 8.5E-24 T 28-03-2018 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Gene3D G3DSA:3.30.70.270 41 115 8.8E-25 T 28-03-2018 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Gene3D G3DSA:3.30.70.270 116 170 1.8E-22 T 28-03-2018 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 SUPERFAMILY SSF56672 1 234 4.09E-94 T 28-03-2018 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Gene3D G3DSA:3.30.1490.100 243 351 2.5E-29 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 SUPERFAMILY SSF100879 241 349 8.63E-27 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS05750 6dbcb150c871b4460e10a7f97463967a 351 Pfam PF11799 impB/mucB/samB family C-terminal domain 236 341 2.3E-10 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 1.0E-51 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 SUPERFAMILY SSF53901 270 391 1.54E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 7 390 1.3E-139 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 PIRSF PIRSF000429 1 392 2.2E-124 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 Pfam PF00108 Thiolase, N-terminal domain 5 261 8.8E-94 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 SUPERFAMILY SSF53901 5 269 7.16E-78 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 Gene3D G3DSA:3.40.47.10 1 148 1.4E-26 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 Gene3D G3DSA:3.40.47.10 265 389 4.4E-37 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01615 2660bb34b2b4fad3b1978c799e367c22 392 Gene3D G3DSA:3.40.47.10 152 264 1.5E-25 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 TIGRFAM TIGR00979 fumC_II: fumarate hydratase, class II 4 461 2.0E-250 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 ProSitePatterns PS00163 Fumarate lyases signature. 317 326 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 Pfam PF00206 Lyase 12 342 8.8E-122 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 Gene3D G3DSA:1.10.40.30 418 462 2.3E-26 T 28-03-2018 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 SUPERFAMILY SSF48557 5 459 1.37E-158 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 Hamap MF_00743 Fumarate hydratase class II [fumC]. 4 462 91.592 T 28-03-2018 IPR005677 Fumarate hydratase, class II GO:0004333|GO:0006106|GO:0045239 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 Gene3D G3DSA:1.20.200.10 139 417 3.7E-88 T 28-03-2018 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 PRINTS PR00149 Fumarate lyase superfamily signature 134 152 3.6E-34 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 PRINTS PR00149 Fumarate lyase superfamily signature 271 298 3.6E-34 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 PRINTS PR00149 Fumarate lyase superfamily signature 317 333 3.6E-34 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 PRINTS PR00149 Fumarate lyase superfamily signature 180 198 3.6E-34 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 Pfam PF10415 Fumarase C C-terminus 408 461 1.9E-26 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS12580 646dde4dd0d5699beb8501e6f0e56fe8 467 Gene3D G3DSA:1.10.275.10 2 138 2.4E-59 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 172 371 6.1E-28 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 Gene3D G3DSA:3.30.750.80 74 180 1.2E-33 T 28-03-2018 CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 SMART SM00359 3 88 4.9E-17 T 28-03-2018 IPR002478 PUA domain GO:0003723 CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 SUPERFAMILY SSF53335 79 392 5.03E-73 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 SUPERFAMILY SSF88697 4 72 9.94E-17 T 28-03-2018 IPR015947 PUA-like domain CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 Gene3D G3DSA:2.30.130.10 4 72 4.8E-26 T 28-03-2018 IPR002478 PUA domain GO:0003723 CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 Gene3D G3DSA:3.40.50.150 182 396 1.1E-37 T 28-03-2018 CI104_RS09300 9ac318ddf4eb957d66e8b3f9ce2744e6 396 Hamap MF_01857 Ribosomal RNA large subunit methyltransferase I [rlmI]. 1 396 70.385 T 28-03-2018 IPR023542 rRNA large subunit methyltransferase I GO:0008649 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 Gene3D G3DSA:3.30.390.10 2 127 9.8E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 220 251 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 SMART SM00922 133 270 8.8E-12 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 SUPERFAMILY SSF51604 103 399 1.07E-67 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 Pfam PF13378 Enolase C-terminal domain-like 205 389 6.9E-40 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 Gene3D G3DSA:3.20.20.120 128 384 7.3E-66 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 SUPERFAMILY SSF54826 5 120 6.91E-28 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 19 115 6.3E-21 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS12970 2ae39e39feb3d63050fad9440ff09ae6 417 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 90 115 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS11860 1be6f81ee984b2896c70ae5879f56bd0 252 Hamap MF_01246 Chitooligosaccharide deacetylase [chbG]. 3 249 39.889 T 28-03-2018 IPR022948 Chitooligosaccharide deacetylase ChbG-like, bacteria GO:0000272|GO:0016811 CI104_RS11860 1be6f81ee984b2896c70ae5879f56bd0 252 Gene3D G3DSA:3.20.20.370 1 252 1.7E-77 T 28-03-2018 CI104_RS11860 1be6f81ee984b2896c70ae5879f56bd0 252 Pfam PF04794 YdjC-like protein 5 240 1.7E-58 T 28-03-2018 IPR006879 Carbohydrate deacetylase YdjC-like CI104_RS11860 1be6f81ee984b2896c70ae5879f56bd0 252 SUPERFAMILY SSF88713 1 252 2.22E-74 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Gene3D G3DSA:3.30.70.240 401 481 8.1E-19 T 28-03-2018 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 SUPERFAMILY SSF50447 151 299 9.5E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Gene3D G3DSA:3.40.50.300 2 67 1.0E-10 T 28-03-2018 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 TIGRFAM TIGR01394 TypA_BipA: GTP-binding protein TypA/BipA 5 599 8.4E-294 T 28-03-2018 IPR006298 GTP-binding protein TypA GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 SUPERFAMILY SSF54980 302 387 3.96E-15 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Pfam PF00679 Elongation factor G C-terminus 397 477 1.2E-21 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Gene3D G3DSA:2.40.50.250 483 573 4.3E-38 T 28-03-2018 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 SUPERFAMILY SSF52540 3 207 1.87E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 PRINTS PR00315 GTP-binding elongation factor signature 87 98 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 PRINTS PR00315 GTP-binding elongation factor signature 123 132 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 PRINTS PR00315 GTP-binding elongation factor signature 71 81 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 PRINTS PR00315 GTP-binding elongation factor signature 51 59 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 PRINTS PR00315 GTP-binding elongation factor signature 7 20 9.6E-15 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Gene3D G3DSA:3.40.50.300 68 186 1.0E-29 T 28-03-2018 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 5 134 8.7E-25 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 SUPERFAMILY SSF54980 398 512 2.4E-26 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Gene3D G3DSA:3.30.70.870 302 400 1.1E-31 T 28-03-2018 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Gene3D G3DSA:2.40.30.10 187 300 5.1E-22 T 28-03-2018 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 44 59 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Pfam PF00009 Elongation factor Tu GTP binding domain 4 195 8.2E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS24520 4cc4c1ce5e45c84c98366d8df29a5327 607 Pfam PF03144 Elongation factor Tu domain 2 219 289 3.3E-11 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 SMART SM00421 151 208 3.1E-24 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 184 2.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 154 168 2.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 184 196 2.7E-15 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 ProSitePatterns PS00622 LuxR-type HTH domain signature. 168 195 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 SMART SM00448 7 120 1.9E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 Pfam PF00072 Response regulator receiver domain 9 121 3.6E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 Gene3D G3DSA:1.10.10.10 131 215 3.0E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 SUPERFAMILY SSF52172 7 137 7.83E-34 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 Pfam PF00196 Bacterial regulatory proteins, luxR family 153 207 3.5E-24 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 SUPERFAMILY SSF46894 138 210 7.14E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS17105 cbb840c0c38d0f7e23a87a6e877c7188 215 Gene3D G3DSA:3.40.50.2300 6 130 8.4E-35 T 28-03-2018 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 Pfam PF00155 Aminotransferase class I and II 49 354 2.3E-67 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 TIGRFAM TIGR01141 hisC: histidinol-phosphate transaminase 14 355 3.7E-125 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 SUPERFAMILY SSF53383 12 355 9.71E-80 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 Gene3D G3DSA:3.90.1150.10 8 69 2.1E-5 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 214 223 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 Gene3D G3DSA:3.40.640.10 70 247 7.7E-41 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 Hamap MF_01023 Histidinol-phosphate aminotransferase [hisC]. 12 358 54.551 T 28-03-2018 IPR005861 Histidinol-phosphate aminotransferase family GO:0000105|GO:0004400 KEGG: 00340+2.6.1.9|KEGG: 00350+2.6.1.9|KEGG: 00360+2.6.1.9|KEGG: 00400+2.6.1.9|KEGG: 00401+2.6.1.9|KEGG: 00960+2.6.1.9 CI104_RS16355 74f12e5072b3294e8c06dcb368b62f90 359 Gene3D G3DSA:3.90.1150.10 248 357 1.5E-14 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS24905 157fa1bdcb3582b37efd78ed6406f9af 355 Pfam PF16363 GDP-mannose 4,6 dehydratase 5 327 9.7E-99 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS24905 157fa1bdcb3582b37efd78ed6406f9af 355 Gene3D G3DSA:3.90.25.10 230 337 8.5E-30 T 28-03-2018 CI104_RS24905 157fa1bdcb3582b37efd78ed6406f9af 355 SUPERFAMILY SSF51735 1 346 4.89E-97 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS24905 157fa1bdcb3582b37efd78ed6406f9af 355 Gene3D G3DSA:3.40.50.720 1 229 8.1E-61 T 28-03-2018 CI104_RS24905 157fa1bdcb3582b37efd78ed6406f9af 355 TIGRFAM TIGR01181 dTDP_gluc_dehyt: dTDP-glucose 4,6-dehydratase 3 341 6.2E-162 T 28-03-2018 IPR005888 dTDP-glucose 4,6-dehydratase GO:0008460|GO:0009225 KEGG: 00521+4.2.1.46|KEGG: 00523+4.2.1.46|KEGG: 00525+4.2.1.46|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 5.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 5.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 5.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 8.4E-131 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 2.6E-58 T 28-03-2018 CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 SUPERFAMILY SSF51735 6 252 2.82E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 2.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 2.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 2.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 2.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.6E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 Gene3D G3DSA:3.40.50.720 3 44 2.3E-6 T 28-03-2018 CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 Gene3D G3DSA:3.40.50.720 45 253 1.4E-59 T 28-03-2018 CI104_RS11885 fe8bc2f08a0a3e2310a59201693403e8 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 TIGRFAM TIGR04491 reactive_PduG: diol dehydratase reactivase alpha subunit 3 601 3.8E-286 T 28-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 Pfam PF08841 Diol dehydratase reactivase ATPase-like domain 275 602 1.6E-163 T 28-03-2018 IPR030994 Diol dehydratase reactivase ATPase-like domain CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 PIRSF PIRSF011502 1 608 0.0 T 28-03-2018 IPR009191 Diol dehydratase-reactivating factor alpha subunit CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 SUPERFAMILY SSF53067 255 403 6.73E-70 T 28-03-2018 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 SUPERFAMILY SSF53067 3 93 6.73E-70 T 28-03-2018 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 SUPERFAMILY SSF53067 407 600 1.44E-33 T 28-03-2018 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 SUPERFAMILY SSF82317 93 254 1.57E-67 T 28-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 Gene3D G3DSA:2.40.50.140 466 509 5.9E-25 T 28-03-2018 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 Gene3D G3DSA:3.50.30.70 108 247 1.4E-67 T 28-03-2018 IPR028975 Diol dehydratase-reactivating factor, alpha subunit, swiveling domain CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 Gene3D G3DSA:3.30.420.40 1 107 1.9E-15 T 28-03-2018 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 Gene3D G3DSA:3.30.420.40 510 610 1.7E-18 T 28-03-2018 CI104_RS16210 8211c4a8252e4ce4b7dc438abcbfb5e0 610 Gene3D G3DSA:3.30.420.40 280 411 0.0029 T 28-03-2018 CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 Gene3D G3DSA:3.20.20.120 118 373 1.2E-58 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 Gene3D G3DSA:3.30.390.10 3 117 1.3E-34 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 209 240 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 14 110 4.9E-35 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 Pfam PF13378 Enolase C-terminal domain-like 142 379 2.8E-43 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 SMART SM00922 128 259 4.9E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 SUPERFAMILY SSF54826 1 112 8.77E-34 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 SUPERFAMILY SSF51604 98 388 2.1E-80 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS12765 d24146e44a9a75d5ce5922c2c79431c6 404 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 85 110 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS04590 5b94048d8fd9a553079a6a4f613bccd9 164 Gene3D G3DSA:3.40.35.10 2 160 3.8E-44 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS04590 5b94048d8fd9a553079a6a4f613bccd9 164 SUPERFAMILY SSF52728 1 162 1.57E-37 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS04590 5b94048d8fd9a553079a6a4f613bccd9 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 151 2.3E-37 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 SMART SM00354 1 71 9.0E-36 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 2.4E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 Pfam PF13377 Periplasmic binding protein-like domain 171 331 2.4E-30 T 28-03-2018 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 Gene3D G3DSA:3.40.50.2300 179 300 4.1E-38 T 28-03-2018 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 SUPERFAMILY SSF53822 60 332 2.36E-66 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 Gene3D G3DSA:3.40.50.2300 56 178 5.5E-23 T 28-03-2018 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 SUPERFAMILY SSF47413 1 59 5.96E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS19775 8a03ef926edd7d33fc6f5326b96a0153 337 Gene3D G3DSA:1.10.260.40 2 55 3.0E-23 T 28-03-2018 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 Gene3D G3DSA:3.50.50.60 3 330 1.6E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 8.4E-11 T 28-03-2018 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 265 280 8.4E-11 T 28-03-2018 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 147 162 8.4E-11 T 28-03-2018 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 Pfam PF01494 FAD binding domain 135 165 3.7E-5 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 SUPERFAMILY SSF51905 3 168 1.38E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS00055 1741a37d4b71db79f918876110ba78c8 368 SUPERFAMILY SSF51905 251 313 1.38E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Pfam PF04545 Sigma-70, region 4 549 602 1.0E-18 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 405 418 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Gene3D G3DSA:1.10.10.10 543 614 6.8E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 574 600 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Pfam PF03979 Sigma-70 factor, region 1.1 4 81 1.4E-30 T 28-03-2018 IPR007127 RNA polymerase sigma factor 70, region 1.1 GO:0003677|GO:0006355 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 PRINTS PR00046 Major sigma-70 factor signature 574 589 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 PRINTS PR00046 Major sigma-70 factor signature 429 437 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 PRINTS PR00046 Major sigma-70 factor signature 589 600 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 PRINTS PR00046 Major sigma-70 factor signature 405 418 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 PRINTS PR00046 Major sigma-70 factor signature 553 565 6.4E-31 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Pfam PF04542 Sigma-70 region 2 381 450 1.7E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 SUPERFAMILY SSF88659 511 613 2.58E-25 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 SUPERFAMILY SSF88946 115 448 1.11E-104 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Pfam PF04546 Sigma-70, non-essential region 139 350 2.7E-75 T 28-03-2018 IPR007631 RNA polymerase sigma factor 70, non-essential domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Pfam PF04539 Sigma-70 region 3 460 535 3.6E-29 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 377 602 3.6E-38 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 TIGRFAM TIGR02393 RpoD_Cterm: RNA polymerase sigma factor RpoD 377 613 1.3E-120 T 28-03-2018 IPR012760 RNA polymerase sigma factor RpoD, C-terminal GO:0003677|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Gene3D G3DSA:1.10.10.10 451 501 8.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Pfam PF00140 Sigma-70 factor, region 1.2 98 128 1.8E-12 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Gene3D G3DSA:1.10.601.10 3 114 2.8E-14 T 28-03-2018 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Gene3D G3DSA:1.10.601.10 115 450 5.7E-109 T 28-03-2018 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 Hamap MF_00963 RNA polymerase sigma factor RpoD [rpoD]. 4 614 46.877 T 28-03-2018 IPR028630 RNA polymerase sigma factor RpoD GO:0006352|GO:0016987 CI104_RS03660 0166b36edf653c2860192e8b80b3c292 615 SUPERFAMILY SSF88659 454 527 8.78E-21 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 Gene3D G3DSA:3.40.50.720 42 261 2.5E-69 T 28-03-2018 CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 Gene3D G3DSA:3.40.50.720 1 41 6.8E-10 T 28-03-2018 CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 SUPERFAMILY SSF51735 6 255 3.59E-87 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 2.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 2.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 217 237 2.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 2.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 2.3E-46 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.5E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.5E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.5E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 191 1.3E-4 T 28-03-2018 CI104_RS18190 05e826f708a5f869d8f27b91a63fb77e 263 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 254 2.6E-70 T 28-03-2018 CI104_RS03905 1619812a30aff0474319ba43f7004939 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 2 128 9.5E-63 T 28-03-2018 IPR016052 Bacteriophage 933W, L0136 CI104_RS03905 1619812a30aff0474319ba43f7004939 130 Gene3D G3DSA:2.40.50.200 22 130 3.9E-41 T 28-03-2018 CI104_RS03905 1619812a30aff0474319ba43f7004939 130 Pfam PF04076 Bacterial OB fold (BOF) protein 25 127 4.6E-46 T 28-03-2018 IPR005220 Bacterial OB-fold CI104_RS03905 1619812a30aff0474319ba43f7004939 130 SUPERFAMILY SSF101756 31 127 2.88E-36 T 28-03-2018 IPR005220 Bacterial OB-fold CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Pfam PF07731 Multicopper oxidase 358 468 4.6E-12 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Gene3D G3DSA:2.60.40.420 28 164 2.5E-22 T 28-03-2018 IPR008972 Cupredoxin CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Hamap MF_00915 Cell division protein FtsP [ftsP]. 1 467 58.249 T 28-03-2018 IPR026589 Cell division protein FtsP GO:0043093 CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 SUPERFAMILY SSF49503 314 466 2.87E-19 T 28-03-2018 IPR008972 Cupredoxin CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 SUPERFAMILY SSF49503 3 165 1.78E-25 T 28-03-2018 IPR008972 Cupredoxin CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Gene3D G3DSA:2.60.40.420 167 298 9.1E-25 T 28-03-2018 IPR008972 Cupredoxin CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Pfam PF00394 Multicopper oxidase 228 287 3.2E-4 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Gene3D G3DSA:2.60.40.420 346 470 7.7E-15 T 28-03-2018 IPR008972 Cupredoxin CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 Pfam PF07732 Multicopper oxidase 52 166 1.3E-26 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CI104_RS03920 e9145ef557e49e57b26eb08a7a3b09e9 470 SUPERFAMILY SSF49503 172 310 1.63E-29 T 28-03-2018 IPR008972 Cupredoxin CI104_RS05305 4106b18b45feb4726ace992d1b1fafe7 241 SUPERFAMILY SSF53633 7 240 4.19E-72 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS05305 4106b18b45feb4726ace992d1b1fafe7 241 Hamap MF_01220_B Uridylate kinase [pyrH]. 7 240 43.497 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CI104_RS05305 4106b18b45feb4726ace992d1b1fafe7 241 Pfam PF00696 Amino acid kinase family 10 219 1.3E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS05305 4106b18b45feb4726ace992d1b1fafe7 241 PIRSF PIRSF005650 4 241 2.0E-89 T 28-03-2018 IPR011817 Uridylate kinase GO:0006221|GO:0009041 KEGG: 00240+2.7.4.22 CI104_RS05305 4106b18b45feb4726ace992d1b1fafe7 241 TIGRFAM TIGR02075 pyrH_bact: UMP kinase 9 240 4.8E-104 T 28-03-2018 IPR015963 Uridylate kinase, bacteria GO:0005737|GO:0006221|GO:0033862 KEGG: 00240+2.7.4.22 CI104_RS05305 4106b18b45feb4726ace992d1b1fafe7 241 Gene3D G3DSA:3.40.1160.10 2 241 3.7E-43 T 28-03-2018 CI104_RS25440 e659616dcde22a72abb29fc047c4862e 594 SUPERFAMILY SSF52540 439 578 1.31E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25440 e659616dcde22a72abb29fc047c4862e 594 SUPERFAMILY SSF52540 3 390 1.31E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25440 e659616dcde22a72abb29fc047c4862e 594 Gene3D G3DSA:3.40.50.300 248 586 1.1E-35 T 28-03-2018 CI104_RS25440 e659616dcde22a72abb29fc047c4862e 594 Gene3D G3DSA:3.40.50.300 1 247 6.1E-31 T 28-03-2018 CI104_RS25440 e659616dcde22a72abb29fc047c4862e 594 Pfam PF13245 AAA domain 12 233 1.2E-17 T 28-03-2018 CI104_RS25440 e659616dcde22a72abb29fc047c4862e 594 Pfam PF13361 UvrD-like helicase C-terminal domain 254 565 1.5E-30 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CI104_RS07020 8e1da5c26ff4a12f7cde3d35a9e94e54 499 Pfam PF02378 Phosphotransferase system, EIIC 19 336 1.8E-77 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS07020 8e1da5c26ff4a12f7cde3d35a9e94e54 499 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 399 483 1.3E-16 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS07020 8e1da5c26ff4a12f7cde3d35a9e94e54 499 Pfam PF00367 phosphotransferase system, EIIB 426 458 4.9E-10 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS07020 8e1da5c26ff4a12f7cde3d35a9e94e54 499 SUPERFAMILY SSF55604 423 497 2.75E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS07020 8e1da5c26ff4a12f7cde3d35a9e94e54 499 Gene3D G3DSA:3.30.1360.60 421 497 7.0E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 ProSitePatterns PS01319 Ribosome-binding factor A signature. 79 100 - T 28-03-2018 IPR020053 Ribosome-binding factor A, conserved site GO:0006364 CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 Hamap MF_00003 Ribosome-binding factor A [rbfA]. 3 120 23.321 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 ProDom PD007327 FACTOR A RIBOSOME-BINDING PROCESSING RRNA 3D-STRUCTURE RIBOSOMAL-BINDING PRECURSOR A RBFA 9 100 3.0E-46 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 Gene3D G3DSA:3.30.300.20 6 120 6.0E-36 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 Pfam PF02033 Ribosome-binding factor A 7 112 3.8E-33 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 TIGRFAM TIGR00082 rbfA: ribosome-binding factor A 1 119 3.6E-45 T 28-03-2018 IPR000238 Ribosome-binding factor A GO:0006364 CI104_RS02900 b64c9b48f3ef53e63b9b4f69d366f8ef 133 SUPERFAMILY SSF89919 2 107 6.02E-36 T 28-03-2018 IPR023799 Ribosome-binding factor A domain CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Gene3D G3DSA:3.90.580.10 1 101 3.7E-35 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 SUPERFAMILY SSF117023 447 579 3.53E-43 T 28-03-2018 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Pfam PF08278 DNA primase DnaG DnaB-binding 451 574 3.0E-32 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Pfam PF10410 DnaB-helicase binding domain of primase 369 424 3.4E-12 T 28-03-2018 IPR019475 DNA primase, DnaB-helicase binding domain GO:0016779 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Gene3D G3DSA:1.10.860.10 434 581 2.7E-38 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Gene3D G3DSA:1.20.50.20 368 417 5.6E-21 T 28-03-2018 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Pfam PF08275 DNA primase catalytic core, N-terminal domain 126 251 2.1E-42 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 SMART SM00766 450 575 1.4E-48 T 28-03-2018 IPR013173 DNA primase DnaG, DnaB-binding domain GO:0003896|GO:0006269 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Pfam PF01807 CHC2 zinc finger 7 100 2.5E-41 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 SUPERFAMILY SSF56731 115 428 2.88E-115 T 28-03-2018 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Gene3D G3DSA:3.90.980.10 109 240 6.1E-45 T 28-03-2018 IPR013264 DNA primase, catalytic core, N-terminal CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 PIRSF PIRSF002811 2 580 1.5E-145 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Hamap MF_00974 DNA primase [dnaG]. 4 576 30.395 T 28-03-2018 IPR030846 DNA primase DnaG, bacteria GO:0003896|GO:0006269|GO:0008270 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 SUPERFAMILY SSF57783 4 100 4.08E-36 T 28-03-2018 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 TIGRFAM TIGR01391 dnaG: DNA primase 4 419 2.9E-151 T 28-03-2018 IPR006295 DNA primase, DnaG GO:0003896|GO:0006269 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 SMART SM00400 36 90 1.2E-38 T 28-03-2018 IPR002694 Zinc finger, CHC2-type GO:0003677|GO:0003896|GO:0006260|GO:0008270 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Gene3D G3DSA:3.40.1360.10 241 367 2.0E-32 T 28-03-2018 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 Pfam PF13155 Toprim-like 263 348 1.4E-14 T 28-03-2018 CI104_RS03665 8813ae06e547daf3b20ab0d668491a1e 581 SMART SM00493 259 330 3.1E-21 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 Gene3D G3DSA:3.50.50.60 3 419 5.2E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 Pfam PF00890 FAD binding domain 4 399 3.8E-62 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 Hamap MF_00753 Anaerobic glycerol-3-phosphate dehydrogenase subunit B [glpB]. 1 415 48.586 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 PIRSF PIRSF000141 1 418 3.0E-169 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 TIGRFAM TIGR03378 glycerol3P_GlpB: glycerol-3-phosphate dehydrogenase, anaerobic, B subunit 3 411 2.8E-174 T 28-03-2018 IPR009158 Glycerol-3-phosphate dehydrogenase, GlpB subunit GO:0004368|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 SUPERFAMILY SSF51905 1 57 2.46E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17345 b6a11ee68ea70369a8b0bfb7dd111a0b 419 SUPERFAMILY SSF51905 249 417 2.46E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 Hamap MF_00331 Cysteine desulfurase IscS [iscS]. 1 395 55.805 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 SUPERFAMILY SSF53383 5 390 4.17E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 Pfam PF00266 Aminotransferase class-V 5 368 2.7E-88 T 28-03-2018 IPR000192 Aminotransferase class V domain CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 PIRSF PIRSF005572 2 384 1.7E-143 T 28-03-2018 IPR016454 Cysteine desulfurase KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 Gene3D G3DSA:3.40.640.10 1 233 4.1E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 197 216 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 Gene3D G3DSA:3.90.1150.10 234 404 4.8E-53 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS18620 434897ba9bfd4011959fe809b454ee57 404 TIGRFAM TIGR02006 IscS: cysteine desulfurase IscS 1 404 4.5E-234 T 28-03-2018 IPR010240 Cysteine desulfurase IscS GO:0030170|GO:0031071|GO:0044571 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250|Reactome: R-HSA-1362409|Reactome: R-HSA-947581 CI104_RS11295 a1fe0653b91f9b2f3e69a95aa967de62 137 Pfam PF06894 Bacteriophage lambda tail assembly chaperone, TAC, protein G 1 118 6.1E-40 T 28-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail CI104_RS11295 a1fe0653b91f9b2f3e69a95aa967de62 137 TIGRFAM TIGR01674 phage_lambda_G: phage minor tail protein G 1 133 3.9E-44 T 28-03-2018 IPR010027 Bacteriophage lambda, GpG, minor tail CI104_RS03345 fd55100ccee3bfa78e299c60edaf3a05 528 SUPERFAMILY SSF51445 4 455 7.55E-129 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS03345 fd55100ccee3bfa78e299c60edaf3a05 528 SMART SM00642 14 397 5.5E-109 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS03345 fd55100ccee3bfa78e299c60edaf3a05 528 Pfam PF00128 Alpha amylase, catalytic domain 29 354 3.4E-82 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS03345 fd55100ccee3bfa78e299c60edaf3a05 528 Gene3D G3DSA:3.20.20.80 3 458 4.4E-110 T 28-03-2018 CI104_RS01355 2f0887cd2d3f55d34dc12de9cf94ce64 419 Gene3D G3DSA:1.20.1250.20 229 415 5.2E-17 T 28-03-2018 CI104_RS01355 2f0887cd2d3f55d34dc12de9cf94ce64 419 Gene3D G3DSA:1.20.1250.20 26 224 7.6E-19 T 28-03-2018 CI104_RS01355 2f0887cd2d3f55d34dc12de9cf94ce64 419 SUPERFAMILY SSF103473 31 412 4.19E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS01355 2f0887cd2d3f55d34dc12de9cf94ce64 419 Pfam PF07690 Major Facilitator Superfamily 40 314 3.9E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 SUPERFAMILY SSF53254 1 197 6.23E-54 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 Gene3D G3DSA:3.40.50.1240 1 201 1.7E-50 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 SMART SM00855 2 156 9.2E-20 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 5 14 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 194 4.3E-54 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 TIGRFAM TIGR03162 ribazole_cobC: alpha-ribazole phosphatase 3 181 3.6E-58 T 28-03-2018 IPR017578 Alpha-ribazole phosphatase, CobC GO:0009236|GO:0043755 KEGG: 00860+3.1.3.73|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS07545 b8271c161ccbfcb3ce68b8fd035a7ed6 203 PIRSF PIRSF000709 1 181 4.3E-15 T 28-03-2018 CI104_RS03690 6437e0a56623d51103cfa5696e5ddc0a 224 PIRSF PIRSF009467 3 224 2.3E-64 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CI104_RS03690 6437e0a56623d51103cfa5696e5ddc0a 224 Pfam PF01730 UreF 38 181 2.9E-32 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CI104_RS03690 6437e0a56623d51103cfa5696e5ddc0a 224 Hamap MF_01385 Urease accessory protein UreF [ureF]. 6 224 29.373 T 28-03-2018 IPR002639 Urease accessory protein UreF GO:0006807|GO:0016151 CI104_RS12140 1ac4fbe6ce5cb4329b2975b3f6b43390 248 TIGRFAM TIGR01978 sufC: FeS assembly ATPase SufC 2 244 7.3E-114 T 28-03-2018 IPR010230 FeS cluster assembly SUF system, ATPase SufC GO:0005524|GO:0006810 CI104_RS12140 1ac4fbe6ce5cb4329b2975b3f6b43390 248 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS12140 1ac4fbe6ce5cb4329b2975b3f6b43390 248 SMART SM00382 26 223 1.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS12140 1ac4fbe6ce5cb4329b2975b3f6b43390 248 Gene3D G3DSA:3.40.50.300 1 248 6.2E-44 T 28-03-2018 CI104_RS12140 1ac4fbe6ce5cb4329b2975b3f6b43390 248 Pfam PF00005 ABC transporter 17 172 1.5E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS12140 1ac4fbe6ce5cb4329b2975b3f6b43390 248 SUPERFAMILY SSF52540 2 231 8.31E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 Gene3D G3DSA:3.40.190.10 179 262 1.1E-8 T 28-03-2018 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 Gene3D G3DSA:3.40.190.10 96 178 1.1E-7 T 28-03-2018 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.5E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 SUPERFAMILY SSF53850 97 278 1.69E-18 T 28-03-2018 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 Gene3D G3DSA:1.10.10.10 1 89 3.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 4.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 Pfam PF03466 LysR substrate binding domain 96 277 2.0E-14 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS20680 6470126f11399ccf3a0e6b46823d7f92 313 SUPERFAMILY SSF46785 7 88 4.08E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09010 aecede77e982505930ee3fdd811052c5 285 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 83 92 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CI104_RS09010 aecede77e982505930ee3fdd811052c5 285 TIGRFAM TIGR04060 formate_focA: formate transporter FocA 14 279 1.8E-126 T 28-03-2018 IPR023999 Formate transporter FocA, putative GO:0015499|GO:0015724|GO:0016021 CI104_RS09010 aecede77e982505930ee3fdd811052c5 285 Pfam PF01226 Formate/nitrite transporter 15 276 9.2E-76 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CI104_RS09010 aecede77e982505930ee3fdd811052c5 285 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 26 280 3.8E-95 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CI104_RS09010 aecede77e982505930ee3fdd811052c5 285 Gene3D G3DSA:1.20.1080.10 12 285 2.9E-79 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS09010 aecede77e982505930ee3fdd811052c5 285 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 168 178 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 SUPERFAMILY SSF52540 4 231 1.62E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 ProSitePatterns PS00211 ABC transporters family signature. 396 410 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 Gene3D G3DSA:3.40.50.300 265 496 1.6E-41 T 28-03-2018 CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 Gene3D G3DSA:3.40.50.300 1 255 3.4E-50 T 28-03-2018 CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 Pfam PF00005 ABC transporter 269 423 2.5E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 Pfam PF00005 ABC transporter 22 169 3.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 SUPERFAMILY SSF52540 252 481 1.08E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 SMART SM00382 29 219 7.1E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25100 a8a0a8f19374101c5d258bfdb93da528 501 SMART SM00382 277 472 6.6E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Pfam PF01926 50S ribosome-binding GTPase 218 335 9.1E-25 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 TIGRFAM TIGR00450 mnmE_trmE_thdF: tRNA modification GTPase TrmE 11 454 3.2E-99 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 SUPERFAMILY SSF116878 379 454 3.66E-51 T 28-03-2018 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 SUPERFAMILY SSF116878 121 220 3.66E-51 T 28-03-2018 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Gene3D G3DSA:3.30.1360.120 1 121 1.7E-40 T 28-03-2018 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Hamap MF_00379 tRNA modification GTPase MnmE [mnmE]. 5 454 33.23 T 28-03-2018 IPR004520 tRNA modification GTPase MnmE GO:0003924|GO:0005525|GO:0005622|GO:0006400 Reactome: R-HSA-6787450 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Pfam PF10396 GTP-binding protein TrmE N-terminus 6 120 3.7E-34 T 28-03-2018 IPR018948 GTP-binding protein TrmE, N-terminal Reactome: R-HSA-6787450 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 216 370 1.5E-22 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 SUPERFAMILY SSF52540 72 152 4.25E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 SUPERFAMILY SSF52540 188 372 4.25E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Gene3D G3DSA:1.20.120.430 280 454 7.0E-34 T 28-03-2018 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Gene3D G3DSA:1.20.120.430 122 279 5.0E-27 T 28-03-2018 CI104_RS25265 d30ae0b15674afd5fa6bf428cd0d5575 454 Pfam PF12631 MnmE helical domain 123 451 6.2E-61 T 28-03-2018 IPR025867 MnmE, helical domain Reactome: R-HSA-6787450 CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF55326 618 816 5.76E-67 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Gene3D G3DSA:3.30.1330.10 220 425 1.5E-50 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Gene3D G3DSA:3.30.1330.10 612 813 1.7E-21 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Gene3D G3DSA:3.30.1330.10 183 219 0.0019 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Hamap MF_00419 Phosphoribosylformylglycinamidine synthase [purL]. 2 1295 21.615 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF56042 818 1033 1.79E-55 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SMART SM01211 1039 1294 3.1E-157 T 28-03-2018 CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF56042 432 615 1.08E-52 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 432 588 2.1E-26 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Pfam PF02769 AIR synthase related protein, C-terminal domain 826 966 2.7E-12 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Pfam PF13507 CobB/CobQ-like glutamine amidotransferase domain 1039 1292 1.8E-103 T 28-03-2018 CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF52317 1035 1293 1.35E-99 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Gene3D G3DSA:3.40.50.880 1038 1294 6.7E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 TIGRFAM TIGR01735 FGAM_synt: phosphoribosylformylglycinamidine synthase 4 1293 0.0 T 28-03-2018 IPR010073 Phosphoribosylformylglycinamidine synthase GO:0004642|GO:0006189 KEGG: 00230+6.3.5.3|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF55326 221 428 2.48E-64 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Gene3D G3DSA:3.90.650.10 426 609 1.6E-29 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 Gene3D G3DSA:3.90.650.10 821 994 4.3E-29 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF109736 155 220 1.27E-21 T 28-03-2018 CI104_RS18750 a7c34d9d6b9228ca868080dc64365dee 1295 SUPERFAMILY SSF82697 1 152 2.46E-54 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Pfam PF00742 Homoserine dehydrogenase 614 811 3.9E-47 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Pfam PF00696 Amino acid kinase family 2 284 1.3E-44 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 660 682 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 SUPERFAMILY SSF55021 303 381 3.84E-23 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 472 605 5.6E-32 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Gene3D G3DSA:3.40.1160.10 1 289 3.6E-63 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 SUPERFAMILY SSF51735 464 636 1.81E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Pfam PF01842 ACT domain 324 376 1.9E-9 T 28-03-2018 IPR002912 ACT domain CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 ProSitePatterns PS00324 Aspartokinase signature. 3 11 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 460 2.0E-150 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 PIRSF PIRSF000727 1 818 0.0 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Pfam PF13840 ACT domain 393 453 5.5E-9 T 28-03-2018 IPR027795 GATS-like ACT domain CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 SUPERFAMILY SSF53633 1 296 5.05E-73 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Gene3D G3DSA:3.30.360.10 636 794 8.6E-55 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Gene3D G3DSA:3.30.70.260 385 464 4.2E-19 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Gene3D G3DSA:3.30.70.260 290 384 7.7E-26 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 SUPERFAMILY SSF55347 614 798 2.62E-52 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 Gene3D G3DSA:3.40.50.720 465 635 2.2E-29 T 28-03-2018 CI104_RS04465 cf7321598e16b936288f3104840d69f2 820 SUPERFAMILY SSF55021 383 476 2.32E-22 T 28-03-2018 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 Pfam PF00196 Bacterial regulatory proteins, luxR family 145 200 1.2E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 SMART SM00421 143 200 6.1E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 Gene3D G3DSA:1.10.10.10 127 209 2.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 SMART SM00448 2 115 2.3E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 160 6.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 176 188 6.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 176 6.0E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 SUPERFAMILY SSF46894 136 206 7.48E-21 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 Gene3D G3DSA:3.40.50.2300 1 126 3.5E-30 T 28-03-2018 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 ProSitePatterns PS00622 LuxR-type HTH domain signature. 160 187 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS05965 10732831f7c978c2843758f67fcaaa52 209 SUPERFAMILY SSF52172 1 118 6.26E-29 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS13815 8c8567bd217dce1e078d6969506b9cab 187 SMART SM00463 85 169 4.3E-15 T 28-03-2018 IPR002625 Smr domain CI104_RS13815 8c8567bd217dce1e078d6969506b9cab 187 SUPERFAMILY SSF160443 87 169 1.12E-10 T 28-03-2018 IPR002625 Smr domain CI104_RS13815 8c8567bd217dce1e078d6969506b9cab 187 Pfam PF01713 Smr domain 89 169 7.6E-17 T 28-03-2018 IPR002625 Smr domain CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 SUPERFAMILY SSF56053 83 177 8.06E-36 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 Pfam PF00347 Ribosomal protein L6 11 82 4.7E-18 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 Pfam PF00347 Ribosomal protein L6 90 164 9.1E-19 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 ProSitePatterns PS00525 Ribosomal protein L6 signature 1. 154 162 - T 28-03-2018 IPR002358 Ribosomal protein L6, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 TIGRFAM TIGR03654 L6_bact: ribosomal protein uL6 2 176 2.0E-72 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 PIRSF PIRSF002162 1 177 6.2E-43 T 28-03-2018 IPR000702 Ribosomal protein L6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 SUPERFAMILY SSF56053 1 82 2.49E-23 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 PRINTS PR00059 Ribosomal protein L6 signature 71 96 7.0E-34 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 PRINTS PR00059 Ribosomal protein L6 signature 99 115 7.0E-34 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 PRINTS PR00059 Ribosomal protein L6 signature 141 162 7.0E-34 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 Gene3D G3DSA:3.90.930.12 5 85 2.3E-24 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 Hamap MF_01365_B 50S ribosomal protein L6 [rplF]. 1 176 36.403 T 28-03-2018 IPR019906 Ribosomal protein L6, bacterial-type GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS02120 0be5a51a876d81bf46d49f45e62b791b 177 Gene3D G3DSA:3.90.930.12 86 177 5.0E-39 T 28-03-2018 IPR020040 Ribosomal protein L6, alpha-beta domain GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS16425 05e083ce1ef6222cd0691980b3e9e27e 402 Pfam PF00534 Glycosyl transferases group 1 209 368 7.8E-17 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS16425 05e083ce1ef6222cd0691980b3e9e27e 402 Gene3D G3DSA:3.40.50.2000 205 381 1.5E-25 T 28-03-2018 CI104_RS16425 05e083ce1ef6222cd0691980b3e9e27e 402 SUPERFAMILY SSF53756 20 400 9.03E-48 T 28-03-2018 CI104_RS16425 05e083ce1ef6222cd0691980b3e9e27e 402 Gene3D G3DSA:3.40.50.2000 15 204 6.6E-20 T 28-03-2018 CI104_RS16425 05e083ce1ef6222cd0691980b3e9e27e 402 Pfam PF13579 Glycosyl transferase 4-like domain 20 198 4.0E-18 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 SUPERFAMILY SSF55124 13 142 1.21E-25 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Gene3D G3DSA:3.30.413.10 425 560 7.5E-25 T 28-03-2018 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 TIGRFAM TIGR02041 CysI: sulfite reductase (NADPH) hemoprotein, beta-component 19 558 2.9E-299 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 81 138 3.6E-12 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 353 417 9.2E-15 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Hamap MF_01540 Sulfite reductase [NADPH] hemoprotein beta-component [cysI]. 10 570 58.466 T 28-03-2018 IPR011786 Sulphite reductase (NADPH) hemoprotein, beta subunit GO:0004783|GO:0008652|GO:0009337|GO:0050661|GO:0051539|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 SUPERFAMILY SSF56014 150 344 1.96E-61 T 28-03-2018 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 PRINTS PR00397 Sirohaem Fe-binding site signature 429 447 1.5E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 PRINTS PR00397 Sirohaem Fe-binding site signature 477 495 1.5E-8 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 477 493 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Gene3D G3DSA:3.30.413.10 141 345 5.4E-46 T 28-03-2018 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 SUPERFAMILY SSF55124 346 422 1.11E-21 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 173 331 1.1E-47 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 430 546 0.12 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS19995 8052ddbb73efa47070ed9d6a042b90fb 570 SUPERFAMILY SSF56014 428 559 3.4E-34 T 28-03-2018 CI104_RS26085 f9234297aa68ac948d04d1601b818a0d 249 Pfam PF13098 Thioredoxin-like domain 115 240 3.6E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS26085 f9234297aa68ac948d04d1601b818a0d 249 Gene3D G3DSA:3.40.30.10 104 249 1.6E-15 T 28-03-2018 CI104_RS26085 f9234297aa68ac948d04d1601b818a0d 249 SUPERFAMILY SSF54423 34 88 5.36E-13 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CI104_RS26085 f9234297aa68ac948d04d1601b818a0d 249 Gene3D G3DSA:3.10.450.70 31 87 1.9E-14 T 28-03-2018 CI104_RS26085 f9234297aa68ac948d04d1601b818a0d 249 SUPERFAMILY SSF52833 106 244 2.93E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS26085 f9234297aa68ac948d04d1601b818a0d 249 Pfam PF10411 Disulfide bond isomerase protein N-terminus 36 86 6.5E-12 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 SUPERFAMILY SSF50249 1 66 3.92E-23 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 SMART SM00357 3 67 5.4E-29 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 Pfam PF00313 'Cold-shock' DNA-binding domain 3 65 4.4E-29 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 ProSitePatterns PS00352 'Cold-shock' domain signature. 15 34 - T 28-03-2018 IPR019844 Cold-shock conserved site CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 TIGRFAM TIGR02381 cspD: cold shock domain protein CspD 1 68 1.3E-43 T 28-03-2018 IPR012751 CspD, cold shock GO:0003676|GO:0005737|GO:0006355|GO:0006950 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 Gene3D G3DSA:2.40.50.140 1 73 9.5E-27 T 28-03-2018 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 PRINTS PR00050 Cold shock protein signature 4 19 2.8E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 PRINTS PR00050 Cold shock protein signature 25 34 2.8E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 PRINTS PR00050 Cold shock protein signature 40 58 2.8E-16 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS08845 d47cb1775811bcf767df7d701de20c2b 73 PIRSF PIRSF002599 1 73 1.6E-23 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CI104_RS17825 24f0472ea7c50dc21ebf4773086a74de 161 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 3 70 3.9E-6 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS17825 24f0472ea7c50dc21ebf4773086a74de 161 Gene3D G3DSA:3.40.50.1240 1 161 1.3E-19 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS17825 24f0472ea7c50dc21ebf4773086a74de 161 TIGRFAM TIGR00249 sixA: phosphohistidine phosphatase SixA 1 152 4.9E-59 T 28-03-2018 IPR004449 Phosphohistidine phosphatase SixA GO:0005737|GO:0006464|GO:0008969 CI104_RS17825 24f0472ea7c50dc21ebf4773086a74de 161 SUPERFAMILY SSF53254 1 145 7.71E-18 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS03810 aa24dd9c8c43fb0ff49dd102e0f12fa8 262 Pfam PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase 8 254 7.8E-28 T 28-03-2018 IPR004183 Extradiol ring-cleavage dioxygenase, class III enzyme, subunit B GO:0006725|GO:0008198|GO:0016491 CI104_RS03810 aa24dd9c8c43fb0ff49dd102e0f12fa8 262 PIRSF PIRSF006157 1 262 3.1E-93 T 28-03-2018 IPR014436 Extradiol aromatic ring-opening dioxygenase, DODA-type GO:0008270|GO:0016701|GO:0055114 CI104_RS03810 aa24dd9c8c43fb0ff49dd102e0f12fa8 262 Gene3D G3DSA:3.40.830.10 1 262 8.0E-85 T 28-03-2018 CI104_RS03810 aa24dd9c8c43fb0ff49dd102e0f12fa8 262 SUPERFAMILY SSF53213 5 262 4.97E-93 T 28-03-2018 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 Gene3D G3DSA:1.10.10.60 49 101 2.7E-11 T 28-03-2018 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 Pfam PF02796 Helix-turn-helix domain of resolvase 61 101 2.8E-11 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 Gene3D G3DSA:1.20.5.40 31 48 1.9E-13 T 28-03-2018 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 SUPERFAMILY SSF46689 61 101 7.89E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 SUPERFAMILY SSF53041 2 58 6.02E-12 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 Gene3D G3DSA:3.40.50.1390 1 30 1.2E-6 T 28-03-2018 CI104_RS28620 c145e9f8ebdc0ddb4f024f0294c89b52 105 Pfam PF00239 Resolvase, N terminal domain 1 57 8.5E-13 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS08785 056c5c1d77d0b0b14fd060bfe4093dea 478 SUPERFAMILY SSF51735 3 294 2.43E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS08785 056c5c1d77d0b0b14fd060bfe4093dea 478 Gene3D G3DSA:3.40.50.720 2 302 1.6E-26 T 28-03-2018 CI104_RS08785 056c5c1d77d0b0b14fd060bfe4093dea 478 Pfam PF13460 NAD(P)H-binding 9 149 7.3E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS08785 056c5c1d77d0b0b14fd060bfe4093dea 478 Gene3D G3DSA:3.30.530.20 324 478 2.4E-5 T 28-03-2018 IPR023393 START-like domain CI104_RS08785 056c5c1d77d0b0b14fd060bfe4093dea 478 Pfam PF11066 Protein of unknown function (DUF2867) 334 463 1.0E-12 T 28-03-2018 IPR021295 Protein of unknown function DUF2867 CI104_RS00400 060a21d389710d8e13e8cc5f3f10d6bc 460 Gene3D G3DSA:1.20.1250.20 218 429 1.5E-9 T 28-03-2018 CI104_RS00400 060a21d389710d8e13e8cc5f3f10d6bc 460 Gene3D G3DSA:1.20.1250.20 14 217 1.3E-14 T 28-03-2018 CI104_RS00400 060a21d389710d8e13e8cc5f3f10d6bc 460 SUPERFAMILY SSF103473 13 421 9.68E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00400 060a21d389710d8e13e8cc5f3f10d6bc 460 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 62 87 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CI104_RS00400 060a21d389710d8e13e8cc5f3f10d6bc 460 Pfam PF13347 MFS/sugar transport protein 13 427 6.3E-101 T 28-03-2018 CI104_RS00400 060a21d389710d8e13e8cc5f3f10d6bc 460 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 5.2E-151 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 Gene3D G3DSA:3.30.450.20 35 244 0.0022 T 28-03-2018 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 SUPERFAMILY SSF55874 293 459 3.8E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 SMART SM00304 187 239 1.1E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 Gene3D G3DSA:3.30.565.10 308 466 3.3E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 SUPERFAMILY SSF158472 188 236 3.79E-9 T 28-03-2018 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 SMART SM00388 240 304 5.0E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 SMART SM00387 349 461 6.6E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 Pfam PF00512 His Kinase A (phospho-acceptor) domain 240 304 3.0E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 Gene3D G3DSA:1.10.287.130 245 299 1.6E-13 T 28-03-2018 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 386 400 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 414 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 6.9E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 349 460 1.3E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 SUPERFAMILY SSF47384 223 304 7.06E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS16625 fc8714e64d235130076e8ab41afd89cb 467 Pfam PF00672 HAMP domain 188 235 8.8E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 TIGRFAM TIGR00630 uvra: excinuclease ABC subunit A 3 925 0.0 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Pfam PF00005 ABC transporter 806 860 1.1E-5 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 ProSitePatterns PS00211 ABC transporters family signature. 487 501 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Gene3D G3DSA:3.40.50.300 3 34 0.0015 T 28-03-2018 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 SUPERFAMILY SSF52540 4 204 1.23E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 SUPERFAMILY SSF52540 430 569 1.23E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Gene3D G3DSA:3.30.190.20 134 248 9.1E-43 T 28-03-2018 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Gene3D G3DSA:3.40.50.300 35 133 1.6E-4 T 28-03-2018 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Gene3D G3DSA:1.10.8.280 285 405 9.4E-38 T 28-03-2018 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Gene3D G3DSA:3.40.50.300 412 614 1.0E-20 T 28-03-2018 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Hamap MF_00205 UvrABC system protein A [uvrA]. 1 940 23.159 T 28-03-2018 IPR004602 UvrABC system subunit A GO:0006289|GO:0009380|GO:0009381 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 SUPERFAMILY SSF52540 613 911 5.21E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 ProSitePatterns PS00211 ABC transporters family signature. 830 844 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23315 2947876e3696d4030ab8e12dea856cea 940 Gene3D G3DSA:3.40.50.300 615 939 1.0E-54 T 28-03-2018 CI104_RS14985 b743ee64a3afb69c3a8d2c69e3197b73 278 Gene3D G3DSA:3.60.15.10 10 259 1.7E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS14985 b743ee64a3afb69c3a8d2c69e3197b73 278 Pfam PF00753 Metallo-beta-lactamase superfamily 19 82 1.1E-10 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS14985 b743ee64a3afb69c3a8d2c69e3197b73 278 SMART SM00849 21 249 6.3E-5 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS14985 b743ee64a3afb69c3a8d2c69e3197b73 278 SUPERFAMILY SSF56281 5 252 5.24E-32 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 160 465 1.9E-101 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 PRINTS PR00481 Cytosol aminopeptidase signature 295 316 1.7E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 PRINTS PR00481 Cytosol aminopeptidase signature 236 253 1.7E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 PRINTS PR00481 Cytosol aminopeptidase signature 317 337 1.7E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 PRINTS PR00481 Cytosol aminopeptidase signature 347 362 1.7E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 PRINTS PR00481 Cytosol aminopeptidase signature 258 279 1.7E-42 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 SUPERFAMILY SSF53187 153 471 8.16E-99 T 28-03-2018 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 Gene3D G3DSA:3.40.630.10 144 476 9.9E-110 T 28-03-2018 CI104_RS18445 58e75a0991d7ed6afd5f477ddd1d909a 477 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 321 328 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS12690 3df08a67156491fbb12b8a2ff1f01a67 215 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 36 212 1.2E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12690 3df08a67156491fbb12b8a2ff1f01a67 215 SUPERFAMILY SSF161098 12 204 2.62E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12690 3df08a67156491fbb12b8a2ff1f01a67 215 Gene3D G3DSA:1.10.3720.10 3 214 2.7E-31 T 28-03-2018 CI104_RS20030 d95f4965c6ecb126a8fcf33681f176d1 274 SUPERFAMILY SSF46689 6 81 2.51E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS20030 d95f4965c6ecb126a8fcf33681f176d1 274 Pfam PF01418 Helix-turn-helix domain, rpiR family 6 79 1.1E-18 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS20030 d95f4965c6ecb126a8fcf33681f176d1 274 Pfam PF01380 SIS domain 121 248 2.0E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS20030 d95f4965c6ecb126a8fcf33681f176d1 274 SUPERFAMILY SSF53697 89 256 7.07E-32 T 28-03-2018 CI104_RS20030 d95f4965c6ecb126a8fcf33681f176d1 274 Gene3D G3DSA:1.10.10.10 1 81 2.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20030 d95f4965c6ecb126a8fcf33681f176d1 274 Gene3D G3DSA:3.40.50.10490 88 273 3.4E-32 T 28-03-2018 CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 Gene3D G3DSA:3.40.50.300 3 259 1.4E-49 T 28-03-2018 CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 SUPERFAMILY SSF52540 259 485 3.45E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 ProSitePatterns PS00211 ABC transporters family signature. 398 412 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 SMART SM00382 30 226 9.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 SMART SM00382 280 474 2.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 Pfam PF00005 ABC transporter 273 425 2.1E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 Pfam PF00005 ABC transporter 21 172 2.2E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 Gene3D G3DSA:3.40.50.300 260 492 2.9E-39 T 28-03-2018 CI104_RS24290 98adad2438faf34c493d666bbeb1df98 501 SUPERFAMILY SSF52540 4 233 5.97E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12420 6ff8055a173de5ba99fd96d2440f0c1e 298 SUPERFAMILY SSF51430 3 295 2.49E-73 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS12420 6ff8055a173de5ba99fd96d2440f0c1e 298 Gene3D G3DSA:3.20.20.100 1 298 3.8E-63 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS12420 6ff8055a173de5ba99fd96d2440f0c1e 298 Pfam PF00248 Aldo/keto reductase family 18 291 1.9E-58 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS12420 6ff8055a173de5ba99fd96d2440f0c1e 298 PRINTS PR00069 Aldo-keto reductase signature 112 130 2.5E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS12420 6ff8055a173de5ba99fd96d2440f0c1e 298 PRINTS PR00069 Aldo-keto reductase signature 143 160 2.5E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 SUPERFAMILY SSF51645 19 532 2.09E-184 T 28-03-2018 IPR011076 Malate synthase-like GO:0003824 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 Pfam PF01274 Malate synthase 13 532 4.7E-210 T 28-03-2018 IPR001465 Malate synthase GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 Gene3D G3DSA:1.20.1220.12 415 532 7.2E-48 T 28-03-2018 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 Gene3D G3DSA:3.20.20.360 81 414 1.6E-108 T 28-03-2018 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 TIGRFAM TIGR01344 malate_syn_A: malate synthase A 24 532 2.3E-247 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 PIRSF PIRSF001363 2 533 1.7E-247 T 28-03-2018 IPR006252 Malate synthase A GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CI104_RS23620 4bc3a486fc03341fd26352bfb481b382 533 ProSitePatterns PS00510 Malate synthase signature. 266 281 - T 28-03-2018 IPR019830 Malate synthase, conserved site GO:0004474|GO:0006097 KEGG: 00620+2.3.3.9|KEGG: 00630+2.3.3.9|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7118|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7854 CI104_RS05320 4833feb8748d1b3558f953b5d6e9fdcc 252 ProSitePatterns PS01066 Undecaprenyl pyrophosphate synthase family signature. 189 206 - T 28-03-2018 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site GO:0016765 Reactome: R-HSA-446199 CI104_RS05320 4833feb8748d1b3558f953b5d6e9fdcc 252 Hamap MF_01139 Ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) [uppS]. 16 244 39.791 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CI104_RS05320 4833feb8748d1b3558f953b5d6e9fdcc 252 SUPERFAMILY SSF64005 18 239 5.1E-87 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CI104_RS05320 4833feb8748d1b3558f953b5d6e9fdcc 252 Gene3D G3DSA:3.40.1180.10 6 247 1.3E-90 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CI104_RS05320 4833feb8748d1b3558f953b5d6e9fdcc 252 TIGRFAM TIGR00055 uppS: di-trans,poly-cis-decaprenylcistransferase 18 243 2.9E-105 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CI104_RS05320 4833feb8748d1b3558f953b5d6e9fdcc 252 Pfam PF01255 Putative undecaprenyl diphosphate synthase 23 243 1.2E-80 T 28-03-2018 IPR001441 Decaprenyl diphosphate synthase-like GO:0016765 Reactome: R-HSA-446199 CI104_RS24360 ad788ced67b8378e2b69ae8872f0ecfc 104 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 83 1.6E-8 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS24360 ad788ced67b8378e2b69ae8872f0ecfc 104 SUPERFAMILY SSF52794 1 94 1.74E-16 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS24360 ad788ced67b8378e2b69ae8872f0ecfc 104 Gene3D G3DSA:3.40.50.2300 1 98 3.2E-17 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PIRSF PIRSF000350 2 463 4.3E-70 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 SUPERFAMILY SSF55424 345 463 1.05E-30 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 Hamap MF_00247 Soluble pyridine nucleotide transhydrogenase [sthA]. 2 466 69.997 T 28-03-2018 IPR022962 Soluble pyridine nucleotide transhydrogenase GO:0003957|GO:0055114 KEGG: 00760+1.6.1.1|MetaCyc: PWY-5083 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 346 457 2.5E-30 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 Gene3D G3DSA:3.40.50.720 171 336 2.6E-28 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 7 326 1.4E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 Gene3D G3DSA:3.30.390.30 337 463 6.7E-34 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 Gene3D G3DSA:3.50.50.60 3 164 1.9E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 SUPERFAMILY SSF51905 2 335 1.83E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 342 363 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 306 313 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 263 277 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 407 422 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 142 151 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 178 203 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 432 452 1.6E-49 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 1.2E-25 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 291 313 1.2E-25 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 139 157 1.2E-25 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 178 196 1.2E-25 T 28-03-2018 CI104_RS23905 3bdab4c18eb074f9a689f1ab379986be 466 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 262 278 1.2E-25 T 28-03-2018 CI104_RS23270 68ad27caec145499473e3830abc8d8eb 222 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 73 2.2E-17 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS23270 68ad27caec145499473e3830abc8d8eb 222 SUPERFAMILY SSF47616 81 214 1.67E-22 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS23270 68ad27caec145499473e3830abc8d8eb 222 Gene3D G3DSA:1.20.1050.10 98 216 1.0E-24 T 28-03-2018 CI104_RS23270 68ad27caec145499473e3830abc8d8eb 222 Gene3D G3DSA:3.40.30.10 1 97 6.6E-25 T 28-03-2018 CI104_RS23270 68ad27caec145499473e3830abc8d8eb 222 Pfam PF00043 Glutathione S-transferase, C-terminal domain 141 205 9.6E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS23270 68ad27caec145499473e3830abc8d8eb 222 SUPERFAMILY SSF52833 1 80 3.48E-19 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 39 49 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 Gene3D G3DSA:3.30.390.30 332 450 1.4E-39 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 Gene3D G3DSA:3.50.50.60 1 163 4.3E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 TIGRFAM TIGR01421 gluta_reduc_1: glutathione-disulfide reductase 3 450 1.0E-217 T 28-03-2018 IPR006322 Glutathione reductase, eukaryote/bacterial GO:0004362|GO:0006749|GO:0050660|GO:0050661|GO:0055114 KEGG: 00480+1.8.1.7|MetaCyc: PWY-4081|Reactome: R-HSA-2408550|Reactome: R-HSA-3299685|Reactome: R-HSA-499943|Reactome: R-HSA-5628897 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 318 2.9E-68 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PIRSF PIRSF000350 1 447 4.2E-86 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 339 449 1.0E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 Gene3D G3DSA:3.40.50.720 164 331 1.6E-35 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 132 150 8.2E-29 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 169 187 8.2E-29 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 254 270 8.2E-29 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 7 26 8.2E-29 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 283 305 8.2E-29 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 6 28 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 255 269 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 298 305 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 335 356 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 135 144 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 424 444 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 402 417 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 38 53 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 169 194 7.5E-67 T 28-03-2018 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 SUPERFAMILY SSF51905 1 365 1.04E-55 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01155 5b6b044167604d0fa1650db786a5fd31 450 SUPERFAMILY SSF55424 336 450 6.7E-37 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS18685 02219ba5d346506f745d79a9525ed028 379 Gene3D G3DSA:1.20.1250.20 4 192 1.4E-14 T 28-03-2018 CI104_RS18685 02219ba5d346506f745d79a9525ed028 379 Pfam PF12832 MFS_1 like family 8 357 1.5E-44 T 28-03-2018 IPR024989 Major facilitator superfamily associated domain CI104_RS18685 02219ba5d346506f745d79a9525ed028 379 SUPERFAMILY SSF103473 7 371 3.27E-37 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS18685 02219ba5d346506f745d79a9525ed028 379 Gene3D G3DSA:1.20.1250.20 193 375 3.9E-11 T 28-03-2018 CI104_RS18685 02219ba5d346506f745d79a9525ed028 379 PIRSF PIRSF004925 1 379 5.0E-117 T 28-03-2018 IPR026032 Probable 3-phenylpropionic acid transporter CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 TIGRFAM TIGR02426 protocat_pcaB: 3-carboxy-cis,cis-muconate cycloisomerase 10 349 4.6E-108 T 28-03-2018 IPR012789 3-carboxy-cis,cis-muconate cycloisomerase GO:0019619|GO:0047472 KEGG: 00362+5.5.1.2 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 Pfam PF10397 Adenylosuccinate lyase C-terminus 365 442 2.3E-19 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00149 Fumarate lyase superfamily signature 231 258 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00149 Fumarate lyase superfamily signature 101 119 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00149 Fumarate lyase superfamily signature 146 164 4.3E-25 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 Gene3D G3DSA:1.20.200.10 106 375 7.9E-83 T 28-03-2018 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 Gene3D G3DSA:1.10.40.30 376 443 1.9E-22 T 28-03-2018 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 SUPERFAMILY SSF48557 10 447 7.23E-123 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 SMART SM00998 364 443 3.2E-28 T 28-03-2018 IPR019468 Adenylosuccinate lyase C-terminal KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 Gene3D G3DSA:1.10.275.10 4 105 1.4E-20 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 Pfam PF00206 Lyase 17 297 9.8E-52 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00145 Argininosuccinate lyase family signature 100 122 2.5E-11 T 28-03-2018 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00145 Argininosuccinate lyase family signature 231 255 2.5E-11 T 28-03-2018 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 2.5E-11 T 28-03-2018 CI104_RS08400 4ddde8eac6a57bf8a1aa8d42a7e2c0d5 450 PRINTS PR00145 Argininosuccinate lyase family signature 141 161 2.5E-11 T 28-03-2018 CI104_RS11125 311b9a53269015d4e8e8b5469fd3505d 176 Gene3D G3DSA:1.10.530.40 1 175 2.2E-43 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 CI104_RS11125 311b9a53269015d4e8e8b5469fd3505d 176 Pfam PF00959 Phage lysozyme 47 165 8.0E-29 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CI104_RS11125 311b9a53269015d4e8e8b5469fd3505d 176 SUPERFAMILY SSF53955 9 170 4.96E-33 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS18075 2c343b21d7c1105dcaa119dc5f9e88bd 418 Gene3D G3DSA:1.20.1250.20 199 413 4.2E-24 T 28-03-2018 CI104_RS18075 2c343b21d7c1105dcaa119dc5f9e88bd 418 Pfam PF03825 Nucleoside H+ symporter 1 406 1.1E-181 T 28-03-2018 CI104_RS18075 2c343b21d7c1105dcaa119dc5f9e88bd 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 413 1.5E-211 T 28-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CI104_RS18075 2c343b21d7c1105dcaa119dc5f9e88bd 418 Gene3D G3DSA:1.20.1250.20 5 193 7.8E-11 T 28-03-2018 CI104_RS18075 2c343b21d7c1105dcaa119dc5f9e88bd 418 SUPERFAMILY SSF103473 7 407 1.48E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS11235 f313d3f4018a602e9c13914beafc1c7d 113 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 33 107 8.0E-16 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS11235 f313d3f4018a602e9c13914beafc1c7d 113 SUPERFAMILY SSF51274 7 110 5.62E-31 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS11235 f313d3f4018a602e9c13914beafc1c7d 113 Gene3D G3DSA:2.40.300.10 1 110 1.8E-18 T 28-03-2018 CI104_RS11235 f313d3f4018a602e9c13914beafc1c7d 113 Pfam PF02924 Bacteriophage lambda head decoration protein D 8 102 9.6E-10 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 SUPERFAMILY SSF46626 27 230 4.51E-42 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 Pfam PF02167 Cytochrome C1 family 32 263 2.1E-68 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 Gene3D G3DSA:1.10.760.10 21 232 1.7E-49 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 97 117 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 130 154 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 180 191 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 50 69 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 30 49 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 232 247 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS14505 ae2b93ea03439c1e23f775a2ede361fa 267 PRINTS PR00603 Cytochrome C1 signature 213 232 9.3E-37 T 28-03-2018 IPR002326 Cytochrome c1 GO:0009055|GO:0020037 Reactome: R-HSA-1268020|Reactome: R-HSA-611105 CI104_RS13720 13f86a65a481437c8a2ec38739cd1654 155 SUPERFAMILY SSF54001 34 153 3.6E-37 T 28-03-2018 CI104_RS13720 13f86a65a481437c8a2ec38739cd1654 155 Gene3D G3DSA:3.90.1720.10 31 155 8.0E-33 T 28-03-2018 CI104_RS13720 13f86a65a481437c8a2ec38739cd1654 155 Pfam PF00877 NlpC/P60 family 48 152 4.9E-29 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CI104_RS16820 2c82636a3191c639dfa617ea37c901f3 345 Gene3D G3DSA:2.60.120.10 57 345 5.1E-38 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS16820 2c82636a3191c639dfa617ea37c901f3 345 Pfam PF07883 Cupin domain 263 326 2.1E-6 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS16820 2c82636a3191c639dfa617ea37c901f3 345 Pfam PF07883 Cupin domain 95 162 2.5E-25 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS16820 2c82636a3191c639dfa617ea37c901f3 345 TIGRFAM TIGR02272 gentisate_1_2: gentisate 1,2-dioxygenase 11 344 2.6E-182 T 28-03-2018 IPR011960 Gentisate 1,2-dioxygenase CI104_RS16820 2c82636a3191c639dfa617ea37c901f3 345 SUPERFAMILY SSF51182 11 343 6.17E-114 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS15810 cc65611855aa1e713637cf3f7c23893e 135 Pfam PF02561 Flagellar protein FliS 8 125 8.2E-39 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CI104_RS15810 cc65611855aa1e713637cf3f7c23893e 135 SUPERFAMILY SSF101116 9 130 2.88E-40 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CI104_RS15810 cc65611855aa1e713637cf3f7c23893e 135 PIRSF PIRSF039090 1 135 1.5E-44 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CI104_RS15810 cc65611855aa1e713637cf3f7c23893e 135 Gene3D G3DSA:1.20.120.340 2 129 4.5E-42 T 28-03-2018 CI104_RS15810 cc65611855aa1e713637cf3f7c23893e 135 TIGRFAM TIGR00208 fliS: flagellar protein FliS 1 125 3.9E-41 T 28-03-2018 IPR003713 Flagellar protein FliS GO:0044780 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 Hamap MF_01582 Serine/threonine transporter SstT [sstT]. 6 407 35.926 T 28-03-2018 IPR023025 Serine/threonine transporter SstT GO:0015293|GO:0015826|GO:0032329 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 Gene3D G3DSA:1.10.3860.10 8 407 6.0E-73 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 SUPERFAMILY SSF118215 18 400 5.1E-94 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 Pfam PF00375 Sodium:dicarboxylate symporter family 18 397 1.0E-62 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 PRINTS PR00173 Glutamate-aspartate symporter signature 290 316 2.6E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 PRINTS PR00173 Glutamate-aspartate symporter signature 18 38 2.6E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 PRINTS PR00173 Glutamate-aspartate symporter signature 188 207 2.6E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 PRINTS PR00173 Glutamate-aspartate symporter signature 352 372 2.6E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS03270 3e5164adc460bcdfe11ee3a74bc701a9 414 PRINTS PR00173 Glutamate-aspartate symporter signature 325 344 2.6E-13 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02560 f7e8b180702171d2539b99e0666e71c0 375 Hamap MF_01919 Cell division protein ZapE [zapE]. 4 375 52.892 T 28-03-2018 IPR030870 Cell division protein ZapE GO:0016887|GO:0051301 CI104_RS02560 f7e8b180702171d2539b99e0666e71c0 375 Pfam PF03969 AFG1-like ATPase 5 372 1.3E-159 T 28-03-2018 IPR005654 ATPase, AFG1-like GO:0005524 CI104_RS02560 f7e8b180702171d2539b99e0666e71c0 375 SUPERFAMILY SSF52540 69 208 1.77E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02560 f7e8b180702171d2539b99e0666e71c0 375 Gene3D G3DSA:3.40.50.300 21 372 4.4E-13 T 28-03-2018 CI104_RS09960 2b4dc3bae808ae90a6a7b27923f8411c 304 SUPERFAMILY SSF51735 3 299 8.47E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS09960 2b4dc3bae808ae90a6a7b27923f8411c 304 Pfam PF01370 NAD dependent epimerase/dehydratase family 5 196 3.1E-23 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS09960 2b4dc3bae808ae90a6a7b27923f8411c 304 Gene3D G3DSA:3.40.50.720 1 301 4.9E-48 T 28-03-2018 CI104_RS04865 c916fae1f8ce669e7c1b73afbe0fcefc 121 Pfam PF04999 Cell division protein FtsL 25 119 1.1E-35 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CI104_RS04865 c916fae1f8ce669e7c1b73afbe0fcefc 121 Hamap MF_00910 Cell division protein FtsL [ftsL]. 35 118 16.794 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CI104_RS04865 c916fae1f8ce669e7c1b73afbe0fcefc 121 TIGRFAM TIGR02209 ftsL_broad: cell division protein FtsL 36 118 7.1E-29 T 28-03-2018 IPR011922 Cell division protein FtsL GO:0007049|GO:0016021|GO:0051301 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 SUPERFAMILY SSF46689 251 299 1.12E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 Pfam PF12833 Helix-turn-helix domain 222 299 8.9E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 SUPERFAMILY SSF51182 42 112 2.04E-7 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 SMART SM00342 215 298 8.5E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 Gene3D G3DSA:2.60.120.10 32 258 8.8E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 252 294 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 Gene3D G3DSA:1.10.10.60 259 309 2.0E-13 T 28-03-2018 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 267 282 6.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 282 298 6.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS22990 c79006bcfae02f1cbd27724b95ae1d87 310 SUPERFAMILY SSF47454 137 194 4.45E-11 T 28-03-2018 IPR008917 Transcription factor, Skn-1-like, DNA-binding domain GO:0003677|GO:0006355 CI104_RS02715 25d6bad6f4467c5f80a4580c0bb322e2 188 TIGRFAM TIGR01670 KdsC-phosphatas: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family 26 178 8.1E-75 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS02715 25d6bad6f4467c5f80a4580c0bb322e2 188 SUPERFAMILY SSF56784 22 181 2.2E-40 T 28-03-2018 IPR023214 HAD-like domain CI104_RS02715 25d6bad6f4467c5f80a4580c0bb322e2 188 Pfam PF08282 haloacid dehalogenase-like hydrolase 95 158 1.1E-9 T 28-03-2018 IPR023214 HAD-like domain CI104_RS02715 25d6bad6f4467c5f80a4580c0bb322e2 188 PIRSF PIRSF006118 13 188 2.0E-73 T 28-03-2018 IPR010023 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase GO:0019143 KEGG: 00540+3.1.3.45|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS02715 25d6bad6f4467c5f80a4580c0bb322e2 188 Gene3D G3DSA:3.40.50.1000 3 188 1.3E-25 T 28-03-2018 IPR023214 HAD-like domain CI104_RS13950 18f4f4f2420a6903d50dfecc246f446c 350 Gene3D G3DSA:3.40.50.720 166 275 1.7E-18 T 28-03-2018 CI104_RS13950 18f4f4f2420a6903d50dfecc246f446c 350 Pfam PF00107 Zinc-binding dehydrogenase 168 282 2.6E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS13950 18f4f4f2420a6903d50dfecc246f446c 350 SUPERFAMILY SSF50129 1 167 5.66E-13 T 28-03-2018 IPR011032 GroES-like CI104_RS13950 18f4f4f2420a6903d50dfecc246f446c 350 Gene3D G3DSA:3.90.180.10 1 165 3.1E-24 T 28-03-2018 CI104_RS13950 18f4f4f2420a6903d50dfecc246f446c 350 SUPERFAMILY SSF51735 136 284 3.18E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 ProSitePatterns PS00726 AP endonucleases family 1 signature 1. 27 36 - T 28-03-2018 IPR020847 AP endonuclease 1, binding site GO:0003677|GO:0004519|GO:0005622|GO:0006281 CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 ProSitePatterns PS00728 AP endonucleases family 1 signature 3. 223 234 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 ProSitePatterns PS00727 AP endonucleases family 1 signature 2. 197 213 - T 28-03-2018 IPR020848 AP endonuclease 1, conserved site GO:0003677|GO:0004519|GO:0005622|GO:0006281 Reactome: R-HSA-110357|Reactome: R-HSA-110362|Reactome: R-HSA-110373|Reactome: R-HSA-5651801|Reactome: R-HSA-73930|Reactome: R-HSA-73933 CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 TIGRFAM TIGR00195 exoDNase_III: exodeoxyribonuclease III 1 266 2.5E-109 T 28-03-2018 CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 4 259 4.5E-23 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 SUPERFAMILY SSF56219 1 267 1.44E-88 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 Gene3D G3DSA:3.60.10.10 1 268 3.2E-52 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS11775 f1603c70931885a2a26e7f02d3120595 268 TIGRFAM TIGR00633 xth: exodeoxyribonuclease III (xth) 1 267 1.7E-93 T 28-03-2018 IPR004808 AP endonuclease 1 GO:0004518|GO:0006281 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 Gene3D G3DSA:3.40.309.10 230 402 1.0E-25 T 28-03-2018 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 720 740 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 632 660 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 PIRSF PIRSF000111 1 866 0.0 T 28-03-2018 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase GO:0004022|GO:0006066|GO:0008774|GO:0015976|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 Pfam PF00465 Iron-containing alcohol dehydrogenase 457 850 7.1E-115 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 Gene3D G3DSA:1.20.1090.10 644 868 1.1E-59 T 28-03-2018 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 SUPERFAMILY SSF56796 449 867 1.44E-118 T 28-03-2018 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 SUPERFAMILY SSF53720 6 453 8.25E-84 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 Gene3D G3DSA:3.40.605.10 1 229 3.7E-33 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 Pfam PF00171 Aldehyde dehydrogenase family 5 270 8.1E-27 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS14295 ea3cddf3e74a6c21defbfcb933a65894 891 Gene3D G3DSA:3.40.50.1970 430 643 9.2E-51 T 28-03-2018 CI104_RS16185 e224b774648117167d13f6cc6bfedf66 94 SMART SM00877 4 80 5.4E-36 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16185 e224b774648117167d13f6cc6bfedf66 94 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 22 41 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CI104_RS16185 e224b774648117167d13f6cc6bfedf66 94 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 48 7.0E-20 T 28-03-2018 CI104_RS16185 e224b774648117167d13f6cc6bfedf66 94 Pfam PF00936 BMC domain 5 80 1.3E-28 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16185 e224b774648117167d13f6cc6bfedf66 94 SUPERFAMILY SSF143414 4 90 5.23E-32 T 28-03-2018 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 7.1E-110 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 SUPERFAMILY SSF51569 3 283 1.22E-97 T 28-03-2018 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 283 5.6E-159 T 28-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 Hamap MF_01293 D-tagatose-1,6-bisphosphate aldolase subunit KbaY [kbaY]. 1 286 72.964 T 28-03-2018 IPR023788 D-tagatose-bisphosphate aldolase, class II, subunit KbaY GO:0005975|GO:0008270|GO:0009025|GO:2001059 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 71 84 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 Pfam PF01116 Fructose-bisphosphate aldolase class-II 5 283 6.8E-97 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 PIRSF PIRSF001359 1 284 2.6E-114 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS03030 6d21d129672194c6d53289180a5a022b 291 Gene3D G3DSA:3.20.20.70 1 286 8.9E-104 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 152 180 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 Gene3D G3DSA:3.40.50.720 1 253 3.0E-60 T 28-03-2018 CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 165 184 1.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 211 231 1.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 1.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 186 203 1.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 14 31 1.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 91 102 1.4E-22 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 13 199 0.0021 T 28-03-2018 CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 Pfam PF00106 short chain dehydrogenase 14 209 2.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14120 b025f6caa2aa608581c1d28001f58900 253 SUPERFAMILY SSF51735 10 244 3.36E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 Gene3D G3DSA:2.20.25.10 1 39 2.3E-16 T 28-03-2018 CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 Gene3D G3DSA:2.30.30.40 43 110 1.5E-37 T 28-03-2018 CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 SUPERFAMILY SSF57783 1 36 2.04E-14 T 28-03-2018 CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 SUPERFAMILY SSF82057 38 110 1.19E-29 T 28-03-2018 CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 TIGRFAM TIGR00686 phnA: putative alkylphosphonate utilization operon protein PhnA 2 111 8.3E-61 T 28-03-2018 IPR004624 PhnA protein CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 Pfam PF03831 PhnA domain 44 111 1.0E-34 T 28-03-2018 IPR013988 PhnA protein, C-terminal CI104_RS23055 9d5a82db6aebc30bf26a9f81059d5deb 111 Pfam PF08274 PhnA Zinc-Ribbon 2 30 7.3E-16 T 28-03-2018 IPR013987 PhnA protein, N-terminal CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 Pfam PF00593 TonB dependent receptor 242 663 7.9E-21 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 142 3.2E-18 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 42 664 2.8E-124 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 SUPERFAMILY SSF56935 463 663 7.06E-84 T 28-03-2018 CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 SUPERFAMILY SSF56935 29 432 7.06E-84 T 28-03-2018 CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 Gene3D G3DSA:2.170.130.10 18 149 8.2E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS10885 45d6c176f9b33c5504cf42ffc265f755 664 Gene3D G3DSA:2.40.170.20 150 664 3.6E-45 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS12890 e39a6730dfb3f4ba289051b072949f39 398 SUPERFAMILY SSF103473 5 386 1.02E-56 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12890 e39a6730dfb3f4ba289051b072949f39 398 Gene3D G3DSA:1.20.1250.20 2 198 6.3E-26 T 28-03-2018 CI104_RS12890 e39a6730dfb3f4ba289051b072949f39 398 Gene3D G3DSA:1.20.1250.20 199 398 2.5E-20 T 28-03-2018 CI104_RS12890 e39a6730dfb3f4ba289051b072949f39 398 Hamap MF_00517 Probable sugar efflux transporter [sotB]. 1 390 29.886 T 28-03-2018 IPR023495 Sugar efflux transporter, putative CI104_RS12890 e39a6730dfb3f4ba289051b072949f39 398 Pfam PF07690 Major Facilitator Superfamily 18 319 2.8E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13555 ed4bd6e91742d3579900f62dfeadc9ac 206 TIGRFAM TIGR02423 protocat_alph: protocatechuate 3,4-dioxygenase, alpha subunit 8 206 2.6E-80 T 28-03-2018 IPR012786 Protocatechuate 3,4-dioxygenase, alpha subunit GO:0005506|GO:0018578|GO:0019439|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 CI104_RS13555 ed4bd6e91742d3579900f62dfeadc9ac 206 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 51 79 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CI104_RS13555 ed4bd6e91742d3579900f62dfeadc9ac 206 Gene3D G3DSA:2.60.130.10 2 206 4.6E-56 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CI104_RS13555 ed4bd6e91742d3579900f62dfeadc9ac 206 Pfam PF00775 Dioxygenase 40 196 1.1E-19 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CI104_RS13555 ed4bd6e91742d3579900f62dfeadc9ac 206 SUPERFAMILY SSF49482 4 206 1.18E-64 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CI104_RS21705 4605d993081cd898001d1e457d092053 340 SUPERFAMILY SSF53822 28 340 2.36E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS21705 4605d993081cd898001d1e457d092053 340 Gene3D G3DSA:3.40.50.2300 144 340 1.9E-22 T 28-03-2018 CI104_RS21705 4605d993081cd898001d1e457d092053 340 Pfam PF13407 Periplasmic binding protein domain 30 285 3.1E-53 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS21705 4605d993081cd898001d1e457d092053 340 Gene3D G3DSA:3.40.50.2300 16 143 2.6E-15 T 28-03-2018 CI104_RS22110 958c8b3e776fbb80e7001ce946c14435 325 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 35 288 7.9E-64 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CI104_RS22110 958c8b3e776fbb80e7001ce946c14435 325 Gene3D G3DSA:3.40.190.10 147 270 0.024 T 28-03-2018 CI104_RS22110 958c8b3e776fbb80e7001ce946c14435 325 PIRSF PIRSF006470 1 325 6.0E-101 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CI104_RS22110 958c8b3e776fbb80e7001ce946c14435 325 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 31 310 1.4E-72 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 Pfam PF00375 Sodium:dicarboxylate symporter family 7 402 3.7E-96 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 SUPERFAMILY SSF118215 7 403 1.57E-100 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 Gene3D G3DSA:1.10.3860.10 1 411 2.0E-100 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 331 350 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 5 25 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 296 322 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 148 170 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 358 378 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 196 215 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS15530 90675a219133f5c978f164a2fdde4587 422 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 8.2E-40 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 Pfam PF06956 Regulator of RNA terminal phosphate cyclase 3 188 2.0E-82 T 28-03-2018 IPR009715 Regulator of RNA terminal phosphate cyclase CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 Gene3D G3DSA:3.40.50.10770 26 146 2.2E-7 T 28-03-2018 CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 SMART SM00382 210 361 2.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 SUPERFAMILY SSF52540 193 441 1.22E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 Gene3D G3DSA:1.10.8.60 366 448 1.4E-14 T 28-03-2018 CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 Pfam PF00158 Sigma-54 interaction domain 191 357 4.3E-48 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 Gene3D G3DSA:3.40.50.300 186 365 2.1E-23 T 28-03-2018 CI104_RS23495 d0d54293bad747c48464fefc4e6d1436 526 PIRSF PIRSF037354 2 524 4.5E-260 T 28-03-2018 IPR017183 Sigma54-dependent transcriptional activator, RtcR GO:0003700|GO:0006355 CI104_RS12300 befde07042b4facd9543f0d9a0d109e0 265 SUPERFAMILY SSF56281 52 240 1.23E-30 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS12300 befde07042b4facd9543f0d9a0d109e0 265 Gene3D G3DSA:3.60.15.10 59 257 2.0E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS24920 1fe53267df86e529d654b7d124213beb 348 Gene3D G3DSA:1.10.287.210 203 294 1.4E-20 T 28-03-2018 CI104_RS24920 1fe53267df86e529d654b7d124213beb 348 Pfam PF02706 Chain length determinant protein 15 71 2.5E-14 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CI104_RS24920 1fe53267df86e529d654b7d124213beb 348 Hamap MF_02025 ECA polysaccharide chain length modulation protein [wzzE]. 8 347 56.825 T 28-03-2018 IPR032895 ECA polysaccharide chain length modulation protein WzzE GO:0009246|GO:0016021 CI104_RS24920 1fe53267df86e529d654b7d124213beb 348 Gene3D G3DSA:3.30.1890.10 42 202 1.3E-53 T 28-03-2018 CI104_RS24920 1fe53267df86e529d654b7d124213beb 348 SUPERFAMILY SSF160355 54 318 6.28E-84 T 28-03-2018 CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 Gene3D G3DSA:3.30.70.20 81 118 9.6E-21 T 28-03-2018 CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0027 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 Gene3D G3DSA:3.30.70.20 3 80 2.0E-18 T 28-03-2018 CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 4.1E-80 T 28-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 Gene3D G3DSA:3.30.70.20 119 202 1.2E-17 T 28-03-2018 CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 SUPERFAMILY SSF54862 3 199 1.78E-70 T 28-03-2018 CI104_RS08945 02e50fd6900d5826174ead3ec56a9a1f 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.8E-28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 Gene3D G3DSA:3.30.70.20 81 118 9.6E-21 T 28-03-2018 CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 Pfam PF12800 4Fe-4S binding domain 12 25 0.0027 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 Gene3D G3DSA:3.30.70.20 3 80 2.0E-18 T 28-03-2018 CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 TIGRFAM TIGR02951 DMSO_dmsB: dimethylsulfoxide reductase, chain B 4 163 4.1E-80 T 28-03-2018 IPR014297 Dimethylsulphoxide reductase, chain B CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 Gene3D G3DSA:3.30.70.20 119 202 1.2E-17 T 28-03-2018 CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 SUPERFAMILY SSF54862 3 199 1.78E-70 T 28-03-2018 CI104_RS12715 02e50fd6900d5826174ead3ec56a9a1f 205 Pfam PF13247 4Fe-4S dicluster domain 59 153 1.8E-28 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Pfam PF04542 Sigma-70 region 2 16 88 1.7E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 SUPERFAMILY SSF88659 89 156 5.23E-17 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Gene3D G3DSA:1.10.10.10 89 136 4.0E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 PIRSF PIRSF000770 1 238 3.4E-42 T 28-03-2018 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Gene3D G3DSA:1.10.1740.10 2 86 4.5E-22 T 28-03-2018 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 15 236 1.1E-33 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 TIGRFAM TIGR02479 FliA_WhiG: RNA polymerase sigma factor, FliA/WhiG family 16 236 1.8E-86 T 28-03-2018 IPR012845 RNA polymerase sigma factor, FliA/WhiG GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 SUPERFAMILY SSF88946 5 88 3.66E-23 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 206 232 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 SUPERFAMILY SSF88659 157 237 2.99E-20 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 43 56 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Hamap MF_00962 RNA polymerase sigma factor FliA [fliA]. 5 239 63.295 T 28-03-2018 IPR028617 RNA polymerase sigma factor FliA GO:0003677|GO:0003899|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 PRINTS PR00046 Major sigma-70 factor signature 206 221 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 PRINTS PR00046 Major sigma-70 factor signature 67 75 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 PRINTS PR00046 Major sigma-70 factor signature 189 201 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 PRINTS PR00046 Major sigma-70 factor signature 221 232 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 PRINTS PR00046 Major sigma-70 factor signature 43 56 2.1E-13 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Pfam PF04545 Sigma-70, region 4 185 233 2.8E-17 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Pfam PF04539 Sigma-70 region 3 97 167 6.5E-19 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS15795 5b9263b0019fa06e7e96c8513d1357c0 239 Gene3D G3DSA:1.10.10.10 145 239 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23370 9a19ac3bc4d01366ab4d1824667fd39e 70 SUPERFAMILY SSF69047 2 70 1.57E-28 T 28-03-2018 IPR008462 CsbD-like domain CI104_RS23370 9a19ac3bc4d01366ab4d1824667fd39e 70 Gene3D G3DSA:1.10.1470.10 2 70 2.3E-26 T 28-03-2018 IPR008462 CsbD-like domain CI104_RS23370 9a19ac3bc4d01366ab4d1824667fd39e 70 Pfam PF05532 CsbD-like 5 57 3.2E-23 T 28-03-2018 IPR008462 CsbD-like domain CI104_RS23370 9a19ac3bc4d01366ab4d1824667fd39e 70 PIRSF PIRSF039008 2 67 3.0E-33 T 28-03-2018 IPR026042 Stress response protein YjbJ CI104_RS06145 1f1247c96ef169de986acbc100053040 457 PIRSF PIRSF006060 1 455 5.7E-78 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS06145 1f1247c96ef169de986acbc100053040 457 ProSitePatterns PS00218 Amino acid permeases signature. 40 70 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS06145 1f1247c96ef169de986acbc100053040 457 Pfam PF00324 Amino acid permease 15 451 2.3E-107 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 234 270 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 Hamap MF_00375 Glutamate-1-semialdehyde 2,1-aminomutase [hemL]. 3 426 108.066 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 TIGRFAM TIGR00713 hemL: glutamate-1-semialdehyde-2,1-aminomutase 3 425 3.0E-206 T 28-03-2018 IPR004639 Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase GO:0033014|GO:0042286 KEGG: 00860+5.4.3.8|MetaCyc: PWY-5188 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 SUPERFAMILY SSF53383 2 425 7.46E-138 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 Gene3D G3DSA:3.90.1150.10 312 426 7.6E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 Gene3D G3DSA:3.90.1150.10 1 154 5.9E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 Pfam PF00202 Aminotransferase class-III 32 395 9.9E-81 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS05220 cdefa25f41f47a7eadfd76e84165f744 426 Gene3D G3DSA:3.40.640.10 167 311 4.4E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS24790 739c80a5b9b89ad21d6554b9f3bf6b0d 238 Gene3D G3DSA:3.40.50.1000 1 238 1.2E-22 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24790 739c80a5b9b89ad21d6554b9f3bf6b0d 238 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 207 1.5E-14 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24790 739c80a5b9b89ad21d6554b9f3bf6b0d 238 SUPERFAMILY SSF56784 9 238 8.65E-41 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24790 739c80a5b9b89ad21d6554b9f3bf6b0d 238 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 102 200 2.3E-11 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Pfam PF09299 Mu transposase, C-terminal 491 558 2.2E-14 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 SUPERFAMILY SSF46689 181 251 1.09E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Gene3D G3DSA:1.10.10.60 86 167 6.8E-21 T 28-03-2018 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 SUPERFAMILY SSF46689 86 175 1.31E-16 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Gene3D G3DSA:3.30.420.10 253 490 9.5E-20 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 SUPERFAMILY SSF53098 265 480 6.57E-75 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Gene3D G3DSA:1.10.10.10 2 70 4.1E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 SUPERFAMILY SSF50610 484 562 4.45E-19 T 28-03-2018 IPR009004 Transposase, Mu, C-terminal CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Pfam PF09039 Mu DNA binding, I gamma subdomain 152 261 1.4E-31 T 28-03-2018 IPR015126 Mu DNA binding, I gamma subdomain CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Pfam PF02914 Bacteriophage Mu transposase 262 475 3.9E-112 T 28-03-2018 IPR004189 Bacteriophage Mu, transposase GO:0003677|GO:0004803|GO:0006313|GO:0015074 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 SUPERFAMILY SSF46955 2 69 1.28E-9 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Pfam PF02316 Mu DNA-binding domain 8 116 4.8E-10 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Gene3D G3DSA:1.10.10.60 183 247 1.8E-15 T 28-03-2018 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 ProDom PD223702 DNA TRANSPOSASE DNA-BINDING TRANSPOSABLE INTEGRATION ELEMENT RECOMBINATION TRANSPOSASE EXCISION TRANSPOSITION 270 482 2.0E-93 T 28-03-2018 CI104_RS14950 0706756a0f33f6e1e96b9479ea9bbaab 660 Gene3D G3DSA:2.30.30.130 495 562 2.7E-17 T 28-03-2018 IPR015378 Transposase-like, Mu, C-terminal CI104_RS06585 45780662977e94094067f23d29e623e6 217 SUPERFAMILY SSF48498 84 202 1.21E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS06585 45780662977e94094067f23d29e623e6 217 SUPERFAMILY SSF46689 1 67 1.1E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS06585 45780662977e94094067f23d29e623e6 217 Gene3D G3DSA:1.10.357.10 1 214 4.8E-40 T 28-03-2018 CI104_RS06585 45780662977e94094067f23d29e623e6 217 Pfam PF08361 MAATS-type transcriptional repressor, C-terminal region 84 204 5.4E-50 T 28-03-2018 IPR013572 Transcription regulator MAATS, C-terminal GO:0003677 CI104_RS06585 45780662977e94094067f23d29e623e6 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 16 62 1.5E-20 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS06585 45780662977e94094067f23d29e623e6 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 3.4E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS06585 45780662977e94094067f23d29e623e6 217 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 16 29 3.4E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS06585 45780662977e94094067f23d29e623e6 217 ProSitePatterns PS01081 TetR-type HTH domain signature. 28 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 ProSitePatterns PS00150 Acylphosphatase signature 1. 10 20 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 SUPERFAMILY SSF54975 2 93 3.49E-31 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 Pfam PF00708 Acylphosphatase 8 91 4.6E-27 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 Gene3D G3DSA:3.30.70.100 1 93 2.0E-31 T 28-03-2018 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 PRINTS PR00112 Acylphosphatase signature 61 81 2.6E-8 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 PRINTS PR00112 Acylphosphatase signature 26 51 2.6E-8 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 PRINTS PR00112 Acylphosphatase signature 5 20 2.6E-8 T 28-03-2018 IPR020456 Acylphosphatase GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 Hamap MF_01450 Acylphosphatase [yccX]. 2 92 31.148 T 28-03-2018 IPR028627 Acylphosphatase, bacteria GO:0003998 KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS09305 917ddfff5a125317222919b2a3a2d3c4 93 ProSitePatterns PS00151 Acylphosphatase signature 2. 34 50 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS13340 ae8fb1c8085a093cc0cbc0b9b9ab9441 172 SUPERFAMILY SSF55729 3 165 7.03E-33 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS13340 ae8fb1c8085a093cc0cbc0b9b9ab9441 172 Gene3D G3DSA:3.40.630.30 1 169 6.7E-34 T 28-03-2018 CI104_RS13340 ae8fb1c8085a093cc0cbc0b9b9ab9441 172 Pfam PF13420 Acetyltransferase (GNAT) domain 3 154 2.2E-17 T 28-03-2018 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Pfam PF00817 impB/mucB/samB family 6 149 6.1E-34 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 SUPERFAMILY SSF56672 1 236 1.42E-66 T 28-03-2018 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Pfam PF13438 Domain of unknown function (DUF4113) 370 420 4.2E-21 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Pfam PF11798 IMS family HHH motif 172 199 1.8E-5 T 28-03-2018 IPR024728 DNA polymerase type-Y, HhH motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5655862|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Gene3D G3DSA:3.30.1490.100 249 362 8.9E-26 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Gene3D G3DSA:1.10.150.20 173 248 7.9E-15 T 28-03-2018 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Pfam PF11799 impB/mucB/samB family C-terminal domain 241 350 6.6E-15 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 SUPERFAMILY SSF100879 247 345 7.85E-8 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Gene3D G3DSA:3.30.70.270 37 115 1.7E-13 T 28-03-2018 CI104_RS14990 9294ef3fa81a6b491f80109706302de5 421 Gene3D G3DSA:3.30.70.270 116 172 2.3E-12 T 28-03-2018 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 Gene3D G3DSA:3.40.190.10 32 193 7.0E-31 T 28-03-2018 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 Pfam PF13416 Bacterial extracellular solute-binding protein 50 343 3.9E-41 T 28-03-2018 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 Gene3D G3DSA:3.40.190.10 194 357 2.1E-8 T 28-03-2018 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 357 376 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 70 88 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 130 149 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 233 252 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 299 320 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 151 170 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 171 190 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 PRINTS PR00181 Maltose binding protein signature 36 54 1.1E-99 T 28-03-2018 IPR006060 Maltose/Cyclodextrin ABC transporter, substrate-binding protein GO:0006810 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 SUPERFAMILY SSF53850 29 395 1.35E-96 T 28-03-2018 CI104_RS23425 a2022c5686dfb9ccff766ddeb469df0b 396 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 133 150 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 Pfam PF03466 LysR substrate binding domain 99 296 6.3E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 2.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 SUPERFAMILY SSF53850 99 298 6.29E-30 T 28-03-2018 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 Gene3D G3DSA:3.40.190.10 98 185 3.4E-12 T 28-03-2018 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 Gene3D G3DSA:1.10.10.10 8 89 2.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 Gene3D G3DSA:3.40.190.10 186 270 4.8E-10 T 28-03-2018 CI104_RS03145 dbbb413a03d23823febad4f57d184086 312 SUPERFAMILY SSF46785 7 115 8.88E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27250 3a0ef0e634e46ea3b0e883b47423683b 383 Gene3D G3DSA:1.10.287.470 128 183 3.6E-4 T 28-03-2018 CI104_RS27250 3a0ef0e634e46ea3b0e883b47423683b 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 4.8E-53 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS27250 3a0ef0e634e46ea3b0e883b47423683b 383 Gene3D G3DSA:2.40.50.100 64 127 3.6E-14 T 28-03-2018 CI104_RS27250 3a0ef0e634e46ea3b0e883b47423683b 383 Gene3D G3DSA:2.40.50.100 184 361 8.2E-5 T 28-03-2018 CI104_RS27250 3a0ef0e634e46ea3b0e883b47423683b 383 SUPERFAMILY SSF111369 56 288 1.24E-17 T 28-03-2018 CI104_RS27250 3a0ef0e634e46ea3b0e883b47423683b 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 59 286 3.1E-19 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Gene3D G3DSA:3.40.50.2300 810 948 2.4E-40 T 28-03-2018 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SUPERFAMILY SSF52172 824 946 1.42E-38 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SMART SM00388 469 534 4.5E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Pfam PF09456 RcsC Alpha-Beta-Loop (ABL) 709 799 1.2E-31 T 28-03-2018 IPR019017 Signal transduction histidine kinase RcsC, alpha-beta loop, C-terminal GO:0000160|GO:0004673|GO:0004871|GO:0005524|GO:0005886|GO:0006355|GO:0016021|GO:0018106 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SMART SM00448 825 936 1.9E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 635 645 4.8E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 676 689 4.8E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 617 631 4.8E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 PRINTS PR00344 Bacterial sensor protein C-terminal signature 652 670 4.8E-18 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SMART SM00387 581 692 3.6E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Gene3D G3DSA:3.30.565.10 529 692 1.5E-46 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SUPERFAMILY SSF55874 523 692 2.1E-47 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SUPERFAMILY SSF47384 453 535 2.35E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Pfam PF00072 Response regulator receiver domain 827 936 6.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 SUPERFAMILY SSF52172 701 815 1.57E-37 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Gene3D G3DSA:3.30.450.20 249 472 5.3E-7 T 28-03-2018 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 581 690 1.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Hamap MF_00979 Sensor histidine kinase RcsC [rcsC]. 24 941 26.975 T 28-03-2018 IPR030856 Sensor histidine kinase RcsC GO:0000155|GO:0000160|GO:0016021|GO:0042710 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Pfam PF00512 His Kinase A (phospho-acceptor) domain 469 533 6.2E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17240 a37d512abe083406271a43d4f56a44f8 948 Gene3D G3DSA:1.10.287.130 473 528 6.3E-19 T 28-03-2018 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Gene3D G3DSA:1.10.10.350 366 471 8.2E-25 T 28-03-2018 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 SUPERFAMILY SSF52374 3 298 1.15E-112 T 28-03-2018 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Gene3D G3DSA:3.40.50.620 3 118 1.4E-41 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Gene3D G3DSA:1.10.8.70 317 360 3.9E-12 T 28-03-2018 IPR020752 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 1 GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 TIGRFAM TIGR00464 gltX_bact: glutamate--tRNA ligase 2 462 1.0E-209 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Gene3D G3DSA:1.10.1160.10 232 314 4.2E-35 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Hamap MF_00022 Glutamate--tRNA ligase [gltX]. 2 461 32.929 T 28-03-2018 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial GO:0000166|GO:0004818|GO:0005524|GO:0005737|GO:0006424 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 179 189 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 6 18 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 195 203 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 35 48 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 PRINTS PR00987 Glutamyl-tRNA synthetase signature 20 31 5.9E-28 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Gene3D G3DSA:3.40.50.620 119 230 1.1E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 2 305 4.4E-121 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 9 20 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS18040 1d90914a4bc08abc7205324f277fc29a 471 SUPERFAMILY SSF48163 299 461 2.62E-45 T 28-03-2018 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding GO:0000049 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188|Reactome: R-HSA-379726 CI104_RS22465 115031e811552d0e2232641be3ba2849 354 SUPERFAMILY SSF56281 36 302 1.96E-27 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS22465 115031e811552d0e2232641be3ba2849 354 Pfam PF13483 Beta-lactamase superfamily domain 42 281 4.3E-16 T 28-03-2018 CI104_RS22465 115031e811552d0e2232641be3ba2849 354 Gene3D G3DSA:3.60.15.10 1 337 1.9E-49 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS22465 115031e811552d0e2232641be3ba2849 354 Hamap MF_01266 Probable L-ascorbate-6-phosphate lactonase UlaG [ulaG]. 1 354 98.176 T 28-03-2018 IPR023951 L-ascorbate-6-phosphate lactonase UlaG GO:0019854|GO:0030145|GO:0035460 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 SUPERFAMILY SSF52313 6 235 3.14E-96 T 28-03-2018 IPR023591 Ribosomal protein S2, flavodoxin-like domain CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 Pfam PF00318 Ribosomal protein S2 9 224 3.8E-94 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 Gene3D G3DSA:3.40.50.10490 5 241 1.8E-96 T 28-03-2018 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 Hamap MF_00291_B 30S ribosomal protein S2 [rpsB]. 2 225 41.313 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 ProSitePatterns PS00962 Ribosomal protein S2 signature 1. 6 17 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 TIGRFAM TIGR01011 rpsB_bact: ribosomal protein uS2 3 226 8.5E-109 T 28-03-2018 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 PRINTS PR00395 Ribosomal protein S2 signature 196 210 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 PRINTS PR00395 Ribosomal protein S2 signature 37 46 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 PRINTS PR00395 Ribosomal protein S2 signature 175 186 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 PRINTS PR00395 Ribosomal protein S2 signature 87 104 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 PRINTS PR00395 Ribosomal protein S2 signature 158 175 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 PRINTS PR00395 Ribosomal protein S2 signature 6 24 8.8E-38 T 28-03-2018 IPR001865 Ribosomal protein S2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05290 559248e15d8247739f4bc27d45bcc343 241 ProSitePatterns PS00963 Ribosomal protein S2 signature 2. 158 182 - T 28-03-2018 IPR018130 Ribosomal protein S2, conserved site GO:0003735|GO:0005840|GO:0006412 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 PIRSF PIRSF000398 1 272 9.6E-73 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 Gene3D G3DSA:1.10.1020.10 57 150 2.1E-34 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 TIGRFAM TIGR00571 dam: DNA adenine methylase 5 267 4.7E-103 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 10 26 2.9E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 2.9E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 31 45 2.9E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 50 63 2.9E-19 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 SUPERFAMILY SSF53335 5 267 5.88E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 Gene3D G3DSA:3.40.50.150 151 269 3.2E-18 T 28-03-2018 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 10 250 2.5E-75 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS01805 5207bb4f9b9f5320ce87e23cfa35c3a0 278 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS07985 85cadbcd0d49b95e077e38a5e285e3a6 200 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 29 200 2.9E-74 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS07985 85cadbcd0d49b95e077e38a5e285e3a6 200 Gene3D G3DSA:3.40.50.300 10 200 1.2E-70 T 28-03-2018 CI104_RS07985 85cadbcd0d49b95e077e38a5e285e3a6 200 Pfam PF12557 Cob(I)alamin adenosyltransferase N terminal 8 24 1.1E-4 T 28-03-2018 IPR025826 Cob(I)alamin adenosyltransferase N-terminal domain KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS07985 85cadbcd0d49b95e077e38a5e285e3a6 200 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 32 200 2.4E-60 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS07985 85cadbcd0d49b95e077e38a5e285e3a6 200 PIRSF PIRSF015617 5 200 1.8E-66 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS07985 85cadbcd0d49b95e077e38a5e285e3a6 200 SUPERFAMILY SSF52540 11 200 1.58E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 SUPERFAMILY SSF46785 13 86 1.67E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 Gene3D G3DSA:3.30.450.40 100 263 2.1E-53 T 28-03-2018 IPR029016 GAF domain-like CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 Gene3D G3DSA:1.10.10.10 11 99 2.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 Pfam PF09339 IclR helix-turn-helix domain 15 65 2.2E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 SUPERFAMILY SSF55781 77 258 3.66E-55 T 28-03-2018 IPR029016 GAF domain-like CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 SMART SM00346 13 102 9.5E-37 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS15195 211d81451dda57603d41517b5b0b64bc 263 Pfam PF01614 Bacterial transcriptional regulator 129 254 2.0E-45 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS13845 cc0d06686e85847f70e6fe8d90240e54 127 SUPERFAMILY SSF54593 1 127 2.01E-23 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS13845 cc0d06686e85847f70e6fe8d90240e54 127 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 2 125 1.1E-8 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS13845 cc0d06686e85847f70e6fe8d90240e54 127 Gene3D G3DSA:3.10.180.10 1 127 2.2E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS15685 9a8dbe040070cc976481ff50936ef143 304 Gene3D G3DSA:3.40.50.1820 4 299 5.5E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS15685 9a8dbe040070cc976481ff50936ef143 304 Pfam PF07859 alpha/beta hydrolase fold 75 276 3.5E-45 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CI104_RS15685 9a8dbe040070cc976481ff50936ef143 304 SUPERFAMILY SSF53474 41 297 4.09E-50 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS15815 286d9611979104e9be363a792896e8c2 123 Pfam PF05400 Flagellar protein FliT 22 106 1.4E-17 T 28-03-2018 IPR008622 Flagellar protein FliT CI104_RS15815 286d9611979104e9be363a792896e8c2 123 Gene3D G3DSA:1.20.58.380 5 90 3.2E-18 T 28-03-2018 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 SMART SM00304 214 266 7.6E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 Gene3D G3DSA:1.10.287.950 320 518 2.6E-48 T 28-03-2018 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 SMART SM00283 267 514 4.5E-95 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 Gene3D G3DSA:1.20.1480.30 215 319 0.004 T 28-03-2018 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 SUPERFAMILY SSF58104 234 517 2.22E-76 T 28-03-2018 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 SMART SM00319 44 180 1.3E-44 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 SUPERFAMILY SSF47170 25 180 3.01E-45 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 Gene3D G3DSA:1.20.120.30 38 174 2.5E-37 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 288 317 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 189 209 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 442 471 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 365 392 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 394 423 4.8E-90 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 Pfam PF02203 Tar ligand binding domain homologue 1 173 2.6E-48 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 482 1.0E-60 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS15500 b012b3b3e5ec8f9597b1a0a341139b1c 553 Pfam PF00672 HAMP domain 215 263 3.5E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS20980 fe642e972bec4e3f4ac48b4177de4bf1 482 TIGRFAM TIGR03173 pbuX: xanthine permease 33 443 1.4E-153 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CI104_RS20980 fe642e972bec4e3f4ac48b4177de4bf1 482 Pfam PF00860 Permease family 29 408 4.1E-120 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS20980 fe642e972bec4e3f4ac48b4177de4bf1 482 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 440 1.2E-135 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS20980 fe642e972bec4e3f4ac48b4177de4bf1 482 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 357 377 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS16155 153818c10f4d112cb220927e4454eb7e 379 TIGRFAM TIGR00312 cbiD: cobalamin biosynthesis protein CbiD 24 367 6.0E-85 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CI104_RS16155 153818c10f4d112cb220927e4454eb7e 379 Pfam PF01888 CbiD 17 273 1.7E-93 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CI104_RS16155 153818c10f4d112cb220927e4454eb7e 379 Gene3D G3DSA:3.30.2110.10 19 188 4.8E-56 T 28-03-2018 CI104_RS16155 153818c10f4d112cb220927e4454eb7e 379 PIRSF PIRSF026782 13 374 2.2E-132 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CI104_RS16155 153818c10f4d112cb220927e4454eb7e 379 Hamap MF_00787 Cobalt-precorrin-5B C(1)-methyltransferase [cbiD]. 17 367 31.081 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CI104_RS16155 153818c10f4d112cb220927e4454eb7e 379 SUPERFAMILY SSF111342 6 291 1.44E-86 T 28-03-2018 IPR002748 Cobalt-precorrin-5B C(1)-methyltransferase CbiD GO:0008168|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.195|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CI104_RS25380 2db395980fa3977699ceb8b9eeba21c6 345 Gene3D G3DSA:3.30.420.40 191 328 8.3E-13 T 28-03-2018 CI104_RS25380 2db395980fa3977699ceb8b9eeba21c6 345 Pfam PF06406 StbA protein 22 340 1.2E-134 T 28-03-2018 IPR009440 Plasmid segregation protein ParM/StbA CI104_RS25380 2db395980fa3977699ceb8b9eeba21c6 345 SUPERFAMILY SSF53067 191 335 1.19E-15 T 28-03-2018 CI104_RS25380 2db395980fa3977699ceb8b9eeba21c6 345 SUPERFAMILY SSF53067 23 179 4.34E-36 T 28-03-2018 CI104_RS25380 2db395980fa3977699ceb8b9eeba21c6 345 Gene3D G3DSA:3.30.420.40 22 188 2.6E-21 T 28-03-2018 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 TIGRFAM TIGR01465 cobM_cbiF: precorrin-4 C11-methyltransferase 10 255 3.3E-100 T 28-03-2018 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase GO:0009236|GO:0046026 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 83 116 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 SUPERFAMILY SSF53790 7 255 1.96E-69 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 Gene3D G3DSA:3.40.1010.10 8 128 1.2E-28 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 10 215 2.0E-46 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 Gene3D G3DSA:3.30.950.10 129 249 1.1E-29 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16140 b3e02bdda5ffaec62e76199b709c753d 257 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 13 27 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 SUPERFAMILY SSF82679 1 97 1.57E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 Gene3D G3DSA:2.30.30.30 111 162 2.0E-5 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 TIGRFAM TIGR01955 RfaH: transcription elongation factor/antiterminator RfaH 4 159 3.8E-67 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 SMART SM00738 1 100 2.8E-33 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 Pfam PF02357 Transcription termination factor nusG 3 96 1.4E-19 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 Gene3D G3DSA:3.30.70.940 1 98 1.5E-18 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS24670 4dc5eea23f63694f14a9e3ce305a5e1e 162 Hamap MF_00951 Transcription antitermination protein RfaH [rfaH]. 1 162 47.259 T 28-03-2018 IPR010215 Transcription antitermination protein RfaH GO:0006355 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 Gene3D G3DSA:3.90.1150.10 1 71 1.8E-11 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 Pfam PF00155 Aminotransferase class I and II 27 392 1.0E-84 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 PRINTS PR00799 Aspartate aminotransferase signature 176 195 1.4E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 PRINTS PR00799 Aspartate aminotransferase signature 274 299 1.4E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 PRINTS PR00799 Aspartate aminotransferase signature 342 360 1.4E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 PRINTS PR00799 Aspartate aminotransferase signature 207 219 1.4E-37 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 244 257 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 SUPERFAMILY SSF53383 2 396 4.5E-115 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 Gene3D G3DSA:3.90.1150.10 253 397 4.0E-48 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS23330 c5564b668dc2f225ebd0454566a75d2a 397 Gene3D G3DSA:3.40.640.10 72 252 1.7E-7 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS17115 e02e46746ef831ccd3696adefe0d9a67 185 TIGRFAM TIGR00385 dsbE: periplasmic protein thiol:disulfide oxidoreductases, DsbE subfamily 6 178 4.1E-81 T 28-03-2018 IPR004799 Periplasmic protein thiol:disulphide oxidoreductase DsbE GO:0015036|GO:0017004|GO:0030288 CI104_RS17115 e02e46746ef831ccd3696adefe0d9a67 185 Gene3D G3DSA:3.40.30.10 36 185 1.7E-27 T 28-03-2018 CI104_RS17115 e02e46746ef831ccd3696adefe0d9a67 185 SUPERFAMILY SSF52833 46 178 1.19E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS17115 e02e46746ef831ccd3696adefe0d9a67 185 ProSitePatterns PS00194 Thioredoxin family active site. 72 90 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS17115 e02e46746ef831ccd3696adefe0d9a67 185 Pfam PF08534 Redoxin 42 170 1.6E-22 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 Pfam PF03741 Integral membrane protein TerC family 14 203 1.3E-49 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 Pfam PF00571 CBS domain 372 422 1.0E-6 T 28-03-2018 IPR000644 CBS domain CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 Pfam PF00571 CBS domain 302 358 1.7E-4 T 28-03-2018 IPR000644 CBS domain CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 SMART SM01091 439 518 1.2E-24 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 SUPERFAMILY SSF54631 290 424 2.07E-25 T 28-03-2018 CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 Gene3D G3DSA:3.10.580.10 283 433 4.2E-27 T 28-03-2018 CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 Pfam PF03471 Transporter associated domain 440 516 8.0E-19 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 SUPERFAMILY SSF56176 437 522 3.27E-21 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS16570 a29f60a38f6275723a7faa3341b7a54d 527 Gene3D G3DSA:3.30.465.10 434 518 3.5E-22 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 Gene3D G3DSA:2.60.40.420 23 145 2.1E-14 T 28-03-2018 IPR008972 Cupredoxin CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00156 Type I copper blue protein family signature 46 59 7.8E-9 T 28-03-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00156 Type I copper blue protein family signature 60 75 7.8E-9 T 28-03-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00156 Type I copper blue protein family signature 92 106 7.8E-9 T 28-03-2018 IPR001235 Blue (type 1) copper protein, plastocyanin-type GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 SUPERFAMILY SSF49503 24 140 6.42E-24 T 28-03-2018 IPR008972 Cupredoxin CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 Pfam PF00127 Copper binding proteins, plastocyanin/azurin family 29 114 4.4E-12 T 28-03-2018 IPR000923 Blue (type 1) copper domain GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00155 Amicyanin family signature 40 59 2.2E-23 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00155 Amicyanin family signature 60 75 2.2E-23 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00155 Amicyanin family signature 97 112 2.2E-23 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00155 Amicyanin family signature 24 39 2.2E-23 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CI104_RS14490 8e82e0661a4f5dd5d09f658df985c860 146 PRINTS PR00155 Amicyanin family signature 81 96 2.2E-23 T 28-03-2018 IPR002386 Amicyanin/Pseudoazurin GO:0005507|GO:0009055 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Pfam PF16870 2-oxoglutarate dehydrogenase C-terminal 788 930 3.5E-54 T 28-03-2018 IPR031717 Multifunctional 2-oxoglutarate metabolism enzyme, C-terminal KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 TIGRFAM TIGR00239 2oxo_dh_E1: oxoglutarate dehydrogenase (succinyl-transferring), E1 component 14 930 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 SUPERFAMILY SSF52518 575 791 2.02E-52 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Pfam PF00676 Dehydrogenase E1 component 218 511 3.5E-48 T 28-03-2018 IPR001017 Dehydrogenase, E1 component GO:0008152|GO:0016624 Reactome: R-HSA-389661 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Gene3D G3DSA:1.10.287.1150 83 166 1.2E-24 T 28-03-2018 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Pfam PF02779 Transketolase, pyrimidine binding domain 591 785 3.6E-67 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 SUPERFAMILY SSF52518 121 546 1.47E-88 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 PIRSF PIRSF000157 1 932 0.0 T 28-03-2018 IPR011603 2-oxoglutarate dehydrogenase E1 component GO:0004591|GO:0006099|GO:0030976|GO:0055114 KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Pfam PF16078 2-oxoglutarate dehydrogenase N-terminus 12 50 1.9E-15 T 28-03-2018 IPR032106 2-oxoglutarate dehydrogenase E1 component, N-terminal domain KEGG: 00020+1.2.4.2|KEGG: 00310+1.2.4.2|KEGG: 00380+1.2.4.2|MetaCyc: PWY-5084 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Gene3D G3DSA:3.40.50.970 167 518 5.9E-94 T 28-03-2018 CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 SMART SM00861 591 784 3.0E-65 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS07910 8a71a4c17544e6af6aa485b4f41e9145 933 Gene3D G3DSA:3.40.50.970 591 800 4.7E-58 T 28-03-2018 CI104_RS22095 fc6e6c295f515c11a74c0e1380feab7c 128 Pfam PF01042 Endoribonuclease L-PSP 7 126 5.9E-45 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CI104_RS22095 fc6e6c295f515c11a74c0e1380feab7c 128 SUPERFAMILY SSF55298 4 127 2.98E-43 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS22095 fc6e6c295f515c11a74c0e1380feab7c 128 TIGRFAM TIGR00004 TIGR00004: reactive intermediate/imine deaminase 3 126 1.8E-53 T 28-03-2018 IPR006056 RidA family CI104_RS22095 fc6e6c295f515c11a74c0e1380feab7c 128 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 103 121 - T 28-03-2018 IPR019897 RidA, conserved site CI104_RS22095 fc6e6c295f515c11a74c0e1380feab7c 128 Gene3D G3DSA:3.30.1330.40 1 128 1.5E-45 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 TIGRFAM TIGR01050 rpsS_bact: ribosomal protein uS19 1 91 8.6E-46 T 28-03-2018 IPR005732 Ribosomal protein S19, bacterial-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 53 65 4.1E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 33 52 4.1E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 PRINTS PR00975 Ribosomal protein S19 family signature 65 80 4.1E-25 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 Pfam PF00203 Ribosomal protein S19 3 83 8.5E-36 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 Gene3D G3DSA:3.30.860.10 1 92 1.9E-40 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 Hamap MF_00531 30S ribosomal protein S19 [rpsS]. 1 89 25.549 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 ProSitePatterns PS00323 Ribosomal protein S19 signature. 53 77 - T 28-03-2018 IPR020934 Ribosomal protein S19 conserved site GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 PIRSF PIRSF002144 1 92 2.1E-31 T 28-03-2018 IPR002222 Ribosomal protein S19/S15 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02065 75dc389130382ce3a8c6078ff4f868d1 92 SUPERFAMILY SSF54570 3 84 2.75E-35 T 28-03-2018 IPR023575 Ribosomal protein S19, superfamily GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 254 261 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 Gene3D G3DSA:3.40.605.10 7 272 6.6E-107 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 Pfam PF00171 Aldehyde dehydrogenase family 19 477 2.4E-173 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 30 476 7.6E-237 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 SUPERFAMILY SSF53720 6 481 4.97E-174 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 282 293 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS19495 eb548ee1065322d83d70d8a2a713b6f5 482 Gene3D G3DSA:3.40.309.10 273 464 5.3E-71 T 28-03-2018 CI104_RS13485 eba64b454afa7d4ad8450a7dea55eb54 326 Gene3D G3DSA:2.160.10.10 45 148 7.1E-14 T 28-03-2018 CI104_RS13485 eba64b454afa7d4ad8450a7dea55eb54 326 Gene3D G3DSA:2.160.10.10 149 303 6.5E-12 T 28-03-2018 CI104_RS13485 eba64b454afa7d4ad8450a7dea55eb54 326 SUPERFAMILY SSF51161 5 315 2.68E-58 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS05000 0bd816435df4219251ac01cad254e68d 457 Pfam PF00324 Amino acid permease 19 452 6.9E-128 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS05000 0bd816435df4219251ac01cad254e68d 457 ProSitePatterns PS00218 Amino acid permeases signature. 44 74 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS05000 0bd816435df4219251ac01cad254e68d 457 PIRSF PIRSF006060 1 452 8.8E-79 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS22315 58cbdfc46c52563cceac3f6554ac08d5 394 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 137 239 2.4E-11 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS22315 58cbdfc46c52563cceac3f6554ac08d5 394 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 123 3.3E-27 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS22315 58cbdfc46c52563cceac3f6554ac08d5 394 SUPERFAMILY SSF55347 129 259 4.09E-30 T 28-03-2018 CI104_RS22315 58cbdfc46c52563cceac3f6554ac08d5 394 SUPERFAMILY SSF51735 2 159 1.37E-45 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS22315 58cbdfc46c52563cceac3f6554ac08d5 394 Gene3D G3DSA:3.30.360.10 136 354 5.4E-42 T 28-03-2018 CI104_RS22315 58cbdfc46c52563cceac3f6554ac08d5 394 Gene3D G3DSA:3.40.50.720 1 135 1.2E-36 T 28-03-2018 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 Gene3D G3DSA:1.10.1040.10 283 489 1.6E-69 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 217 465 2.2E-95 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 Gene3D G3DSA:3.40.50.720 2 282 4.7E-101 T 28-03-2018 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 219 231 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 25 189 1.3E-48 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 SUPERFAMILY SSF51735 12 282 7.09E-90 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 SUPERFAMILY SSF48179 284 488 1.9E-68 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 PRINTS PR00084 Mannitol dehydrogenase signature 180 193 4.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 PRINTS PR00084 Mannitol dehydrogenase signature 219 232 4.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 PRINTS PR00084 Mannitol dehydrogenase signature 26 36 4.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS27305 7c759ea7a9ba0a4e249a1fdd5551f65c 489 PRINTS PR00084 Mannitol dehydrogenase signature 249 264 4.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 SUPERFAMILY SSF103025 7 242 5.02E-67 T 28-03-2018 CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 PIRSF PIRSF006487 10 292 1.3E-10 T 28-03-2018 CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 Gene3D G3DSA:3.30.70.1400 27 240 1.2E-23 T 28-03-2018 CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 TIGRFAM TIGR03317 ygfZ_signature: folate-binding protein YgfZ 187 251 1.8E-25 T 28-03-2018 IPR017703 YgfZ/GcvT conserved site CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 SUPERFAMILY SSF101790 244 325 4.05E-27 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 Pfam PF01571 Aminomethyltransferase folate-binding domain 31 135 2.9E-8 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CI104_RS21035 36484f2c0f4ed12720261cd7fb334648 326 Hamap MF_01175 tRNA-modifying protein YgfZ [ygfZ]. 1 321 48.793 T 28-03-2018 IPR023758 tRNA-modifying protein YgfZ GO:0005542|GO:0009451 CI104_RS00555 da1675aafb163fba97b2f05dd41693aa 265 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 20 230 1.2E-66 T 28-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 CI104_RS00555 da1675aafb163fba97b2f05dd41693aa 265 SUPERFAMILY SSF56112 62 215 5.76E-8 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS00555 da1675aafb163fba97b2f05dd41693aa 265 PIRSF PIRSF037318 1 265 1.2E-162 T 28-03-2018 IPR017172 Lipopolysaccharide core heptose(I) kinase rfaP GO:0009103|GO:0016301 CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 248 330 3.8E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 248 312 3.5E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 ProSitePatterns PS00211 ABC transporters family signature. 169 183 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 Gene3D G3DSA:3.40.50.300 16 335 2.3E-73 T 28-03-2018 CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 Pfam PF00005 ABC transporter 40 196 2.1E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 SMART SM00382 48 254 4.9E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS14265 e998671eefb8acd3b8fcf3acc4f990fe 337 SUPERFAMILY SSF52540 49 316 3.55E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS03025 8ca18496f9de466678668561a128c535 158 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 5 154 9.6E-70 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CI104_RS03025 8ca18496f9de466678668561a128c535 158 Pfam PF03830 PTS system sorbose subfamily IIB component 6 153 3.4E-48 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS03025 8ca18496f9de466678668561a128c535 158 SUPERFAMILY SSF52728 5 156 9.42E-48 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS03025 8ca18496f9de466678668561a128c535 158 Gene3D G3DSA:3.40.35.10 5 158 3.7E-55 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS11300 0f566db5d0c1d23bd0894744a83c77dd 110 Pfam PF06223 Minor tail protein T 2 104 6.0E-43 T 28-03-2018 IPR009350 Minor tail T CI104_RS11300 0f566db5d0c1d23bd0894744a83c77dd 110 TIGRFAM TIGR01715 phage_lam_T: phage tail assembly protein T 1 105 4.6E-49 T 28-03-2018 IPR009350 Minor tail T CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 Pfam PF01025 GrpE 35 194 4.6E-47 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 ProSitePatterns PS01071 grpE protein signature. 149 192 - T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 SUPERFAMILY SSF51064 139 195 5.62E-16 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 SUPERFAMILY SSF58014 47 138 3.27E-27 T 28-03-2018 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 Gene3D G3DSA:2.30.22.10 138 194 8.8E-18 T 28-03-2018 IPR009012 GrpE nucleotide exchange factor, head GO:0006457 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 PRINTS PR00773 GrpE protein signature 63 79 1.7E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 PRINTS PR00773 GrpE protein signature 173 192 1.7E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 PRINTS PR00773 GrpE protein signature 91 106 1.7E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 PRINTS PR00773 GrpE protein signature 146 161 1.7E-25 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 Hamap MF_01151 Protein GrpE [grpE]. 4 194 20.545 T 28-03-2018 IPR000740 GrpE nucleotide exchange factor GO:0000774|GO:0006457|GO:0042803|GO:0051087 Reactome: R-HSA-1268020 CI104_RS19050 30c72ec1a0b3bbf50848eb8a19d5eaa2 197 Gene3D G3DSA:3.90.20.20 32 137 3.5E-31 T 28-03-2018 IPR013805 GrpE nucleotide exchange factor, coiled-coil Reactome: R-HSA-1268020 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 Pfam PF00158 Sigma-54 interaction domain 206 365 2.9E-55 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 Gene3D G3DSA:3.30.450.20 82 186 6.1E-9 T 28-03-2018 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 Gene3D G3DSA:3.40.50.300 201 371 3.7E-23 T 28-03-2018 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 TIGRFAM TIGR04381 HTH_TypR: TyrR family helix-turn-helix domain 460 507 2.2E-28 T 28-03-2018 IPR030828 TyrR family, helix-turn-helix domain GO:0003677 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 SUPERFAMILY SSF55021 2 69 5.88E-5 T 28-03-2018 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 SMART SM00091 80 146 1.3E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 SUPERFAMILY SSF55785 82 172 1.9E-7 T 28-03-2018 IPR000014 PAS domain CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 Gene3D G3DSA:3.30.70.260 1 81 2.0E-7 T 28-03-2018 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 412 421 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 285 300 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 Gene3D G3DSA:1.10.8.60 372 442 3.1E-17 T 28-03-2018 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 SUPERFAMILY SSF52540 206 440 3.55E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 SMART SM00382 226 363 8.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 SUPERFAMILY SSF46689 454 507 4.93E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 Gene3D G3DSA:1.10.10.60 448 508 7.9E-8 T 28-03-2018 CI104_RS13875 1c8cf6ce04a49ca33166b6374bf035cd 513 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 230 243 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 Pfam PF02403 Seryl-tRNA synthetase N-terminal domain 1 107 2.7E-33 T 28-03-2018 IPR015866 Serine-tRNA synthetase, type1, N-terminal KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281|Reactome: R-HSA-2408557|Reactome: R-HSA-379716 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 PIRSF PIRSF001529 1 430 5.9E-186 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 TIGRFAM TIGR00414 serS: serine--tRNA ligase 1 423 1.4E-184 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 Gene3D G3DSA:1.10.287.40 2 104 1.9E-26 T 28-03-2018 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 SUPERFAMILY SSF55681 116 424 1.71E-99 T 28-03-2018 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 228 406 5.5E-37 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 PRINTS PR00981 Seryl-tRNA synthetase signature 282 295 1.1E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 PRINTS PR00981 Seryl-tRNA synthetase signature 270 282 1.1E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 PRINTS PR00981 Seryl-tRNA synthetase signature 322 335 1.1E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 PRINTS PR00981 Seryl-tRNA synthetase signature 339 355 1.1E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 PRINTS PR00981 Seryl-tRNA synthetase signature 357 373 1.1E-33 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 Hamap MF_00176 Serine--tRNA ligase [serS]. 1 428 41.751 T 28-03-2018 IPR002317 Serine-tRNA ligase, type1 GO:0000166|GO:0004828|GO:0005524|GO:0005737|GO:0006434 KEGG: 00970+6.1.1.11|MetaCyc: PWY-6281 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 Gene3D G3DSA:3.30.930.10 105 430 7.2E-96 T 28-03-2018 CI104_RS08935 92f148faaef28e55c4a4e481ac774e54 430 SUPERFAMILY SSF46589 1 112 2.67E-32 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 Pfam PF00376 MerR family regulatory protein 13 49 2.1E-13 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 SMART SM00422 12 80 1.2E-22 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 13 24 8.9E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 24 37 8.9E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 47 67 8.9E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 Pfam PF09278 MerR, DNA binding 54 119 2.7E-15 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 ProSitePatterns PS00552 MerR-type HTH domain signature. 15 37 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 SUPERFAMILY SSF46955 12 134 1.14E-27 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 Gene3D G3DSA:1.10.1660.10 8 66 1.4E-18 T 28-03-2018 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 TIGRFAM TIGR01950 SoxR: redox-sensitive transcriptional activator SoxR 12 152 7.5E-75 T 28-03-2018 IPR010211 Redox-sensitive transcriptional activator SoxR GO:0003677|GO:0006355|GO:0006979|GO:0051537 CI104_RS23280 a5b5361199459e24ff2c1ab68d4ffcd3 154 Gene3D G3DSA:1.10.1660.10 67 142 1.1E-10 T 28-03-2018 CI104_RS02395 956c60a57887204f315d71a06d5061b9 296 Gene3D G3DSA:3.40.50.2300 143 287 2.3E-32 T 28-03-2018 CI104_RS02395 956c60a57887204f315d71a06d5061b9 296 Pfam PF13407 Periplasmic binding protein domain 31 280 1.3E-52 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS02395 956c60a57887204f315d71a06d5061b9 296 SUPERFAMILY SSF53822 7 294 1.28E-72 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS02395 956c60a57887204f315d71a06d5061b9 296 Gene3D G3DSA:3.40.50.2300 21 142 1.1E-24 T 28-03-2018 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Pfam PF00271 Helicase conserved C-terminal domain 802 906 7.7E-18 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Gene3D G3DSA:3.30.2060.10 130 203 4.9E-5 T 28-03-2018 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Pfam PF03461 TRCF domain 1006 1098 3.8E-28 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Hamap MF_00969 Transcription-repair-coupling factor [mfd]. 31 1125 28.905 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 TIGRFAM TIGR00580 mfd: transcription-repair coupling factor 145 1079 0.0 T 28-03-2018 IPR004576 Transcription-repair coupling factor GO:0003684|GO:0005524|GO:0006281 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SMART SM00982 1005 1105 4.0E-49 T 28-03-2018 IPR005118 Transcription-repair-coupling factor, C-terminal domain GO:0006281 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Gene3D G3DSA:3.40.50.300 338 788 3.7E-43 T 28-03-2018 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SMART SM01058 476 573 1.2E-50 T 28-03-2018 IPR003711 CarD-like/TRCF domain CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Gene3D G3DSA:3.40.50.300 789 953 9.3E-26 T 28-03-2018 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SUPERFAMILY SSF143517 992 1144 2.09E-44 T 28-03-2018 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Pfam PF00270 DEAD/DEAH box helicase 602 762 1.4E-20 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SMART SM00490 823 907 1.6E-19 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SUPERFAMILY SSF141259 467 545 1.7E-23 T 28-03-2018 IPR003711 CarD-like/TRCF domain CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SUPERFAMILY SSF52540 6 341 1.35E-100 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SUPERFAMILY SSF52540 351 463 5.1E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SUPERFAMILY SSF52540 520 780 1.93E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SMART SM00487 597 787 1.7E-35 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 SUPERFAMILY SSF52540 779 987 4.23E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10905 d527c5f5e633a0cc68311f350f055ca7 1148 Pfam PF02559 CarD-like/TRCF domain 477 572 4.7E-25 T 28-03-2018 IPR003711 CarD-like/TRCF domain CI104_RS22535 8850e8dc231547d28911cb1977b087a4 102 Gene3D G3DSA:2.30.30.100 4 73 1.1E-33 T 28-03-2018 CI104_RS22535 8850e8dc231547d28911cb1977b087a4 102 Pfam PF17209 Hfq protein 7 69 4.9E-31 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CI104_RS22535 8850e8dc231547d28911cb1977b087a4 102 TIGRFAM TIGR02383 Hfq: RNA chaperone Hfq 5 64 2.0E-29 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CI104_RS22535 8850e8dc231547d28911cb1977b087a4 102 Hamap MF_00436 RNA-binding protein Hfq [hfq]. 3 64 27.396 T 28-03-2018 IPR005001 RNA-binding protein Hfq GO:0003723|GO:0006355 CI104_RS22535 8850e8dc231547d28911cb1977b087a4 102 SUPERFAMILY SSF50182 7 69 4.04E-24 T 28-03-2018 IPR010920 LSM domain CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 Pfam PF07690 Major Facilitator Superfamily 278 434 9.4E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 Pfam PF00083 Sugar (and other) transporter 24 226 7.7E-24 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 Gene3D G3DSA:1.20.1250.20 235 438 7.0E-20 T 28-03-2018 CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 ProSitePatterns PS00216 Sugar transport proteins signature 1. 308 325 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 Gene3D G3DSA:1.20.1250.20 19 234 2.7E-23 T 28-03-2018 CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 1.2E-150 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CI104_RS01105 240e44d347e4e254670c9fe6833492d1 440 SUPERFAMILY SSF103473 18 439 1.1E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS06970 7fda4d291101608394ab0b009443f165 169 Pfam PF00731 AIR carboxylase 9 157 2.3E-63 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CI104_RS06970 7fda4d291101608394ab0b009443f165 169 Hamap MF_01929 N5-carboxyaminoimidazole ribonucleotide mutase [purE]. 10 163 32.272 T 28-03-2018 IPR033747 Class I PurE CI104_RS06970 7fda4d291101608394ab0b009443f165 169 PIRSF PIRSF001338 5 166 8.2E-67 T 28-03-2018 IPR024694 PurE, prokaryotic type GO:0006189 KEGG: 00230+5.4.99.18|MetaCyc: PWY-6123|MetaCyc: PWY-7234 CI104_RS06970 7fda4d291101608394ab0b009443f165 169 TIGRFAM TIGR01162 purE: phosphoribosylaminoimidazole carboxylase, catalytic subunit 10 163 6.5E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CI104_RS06970 7fda4d291101608394ab0b009443f165 169 SUPERFAMILY SSF52255 7 165 1.83E-66 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CI104_RS06970 7fda4d291101608394ab0b009443f165 169 Gene3D G3DSA:3.40.50.7700 1 165 2.0E-65 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CI104_RS06970 7fda4d291101608394ab0b009443f165 169 SMART SM01001 8 159 3.6E-102 T 28-03-2018 IPR000031 PurE domain GO:0006189 Reactome: R-HSA-73817 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 Gene3D G3DSA:3.40.630.10 1 280 2.8E-63 T 28-03-2018 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 Pfam PF07687 Peptidase dimerisation domain 175 282 2.4E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 61 70 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 Pfam PF01546 Peptidase family M20/M25/M40 62 371 4.3E-45 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 97 136 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 SUPERFAMILY SSF55031 179 286 1.79E-29 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 TIGRFAM TIGR01246 dapE_proteo: succinyl-diaminopimelate desuccinylase 6 373 1.0E-175 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 SUPERFAMILY SSF53187 292 373 6.55E-66 T 28-03-2018 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 SUPERFAMILY SSF53187 5 178 6.55E-66 T 28-03-2018 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 Gene3D G3DSA:3.40.630.10 291 375 2.0E-4 T 28-03-2018 CI104_RS18365 6e0a46fa8adecb34f87df3f2cee57464 375 Hamap MF_01690 Succinyl-diaminopimelate desuccinylase [dapE]. 3 375 52.558 T 28-03-2018 IPR005941 Succinyl-diaminopimelate desuccinylase, proteobacteria GO:0009014|GO:0009089 KEGG: 00300+3.5.1.18 CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 Pfam PF03797 Autotransporter beta-domain 597 851 4.9E-51 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 SUPERFAMILY SSF103515 560 873 1.22E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 405 873 3.7E-127 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 Gene3D G3DSA:2.40.128.130 552 873 1.9E-53 T 28-03-2018 CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 Gene3D G3DSA:2.160.20.20 26 511 9.5E-48 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 Pfam PF03212 Pertactin 383 506 8.8E-12 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 SMART SM00869 594 862 2.0E-48 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS24460 5039283ef333c93c220fc4b4f72735db 873 SUPERFAMILY SSF51126 97 507 1.38E-37 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS00635 a60d97f8d638b7e5238cfed57ec2e4f2 427 Gene3D G3DSA:1.20.5.50 138 263 0.0024 T 28-03-2018 CI104_RS00635 a60d97f8d638b7e5238cfed57ec2e4f2 427 Gene3D G3DSA:1.20.5.340 38 137 2.3E-5 T 28-03-2018 CI104_RS00635 a60d97f8d638b7e5238cfed57ec2e4f2 427 Gene3D G3DSA:2.70.70.10 286 427 1.1E-32 T 28-03-2018 CI104_RS00635 a60d97f8d638b7e5238cfed57ec2e4f2 427 SUPERFAMILY SSF51261 227 425 4.55E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif CI104_RS00635 a60d97f8d638b7e5238cfed57ec2e4f2 427 Pfam PF01551 Peptidase family M23 328 421 5.5E-26 T 28-03-2018 IPR016047 Peptidase M23 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PIRSF PIRSF000532 1 326 2.1E-63 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 134 152 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 155 171 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 244 266 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 89 105 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 208 220 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 116 133 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 173 190 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 5 24 7.3E-33 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 SUPERFAMILY SSF53784 1 323 3.53E-70 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 Gene3D G3DSA:3.40.50.450 1 210 3.5E-50 T 28-03-2018 CI104_RS24365 ad538412500d61aa11d2f02296604b91 326 Pfam PF00365 Phosphofructokinase 2 280 2.0E-59 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS07810 dc13cb8c2b6dbde1d326c3c5d627913d 29 TIGRFAM TIGR02115 potass_kdpF: K+-transporting ATPase, F subunit 6 29 9.9E-10 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 CI104_RS07810 dc13cb8c2b6dbde1d326c3c5d627913d 29 Pfam PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) 6 29 2.4E-6 T 28-03-2018 IPR011726 K+ transporting P-type ATPase, F subunit GO:0005886|GO:0008556|GO:0043462 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Pfam PF00675 Insulinase (Peptidase family M16) 54 191 1.6E-37 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 SUPERFAMILY SSF63411 265 502 2.13E-64 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Gene3D G3DSA:3.30.830.10 22 268 1.2E-70 T 28-03-2018 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Pfam PF16187 Middle or third domain of peptidase_M16 400 675 3.7E-53 T 28-03-2018 IPR032632 Peptidase M16, middle/third domain CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Gene3D G3DSA:3.30.830.10 722 962 8.6E-44 T 28-03-2018 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Gene3D G3DSA:3.30.830.10 517 721 2.2E-14 T 28-03-2018 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 ProSitePatterns PS00143 Insulinase family, zinc-binding region signature. 75 98 - T 28-03-2018 IPR001431 Peptidase M16, zinc-binding site GO:0004222|GO:0006508 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Gene3D G3DSA:3.30.830.10 272 502 6.3E-57 T 28-03-2018 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Pfam PF05193 Peptidase M16 inactive domain 681 857 3.2E-14 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 Pfam PF05193 Peptidase M16 inactive domain 217 391 6.4E-20 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 SUPERFAMILY SSF63411 736 957 2.79E-46 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 SUPERFAMILY SSF63411 33 263 1.58E-50 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS20320 a366c15eeb451f8308650ec3a4e68390 962 SUPERFAMILY SSF63411 504 729 1.15E-46 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS13605 f7dec60d1bb7b981bf383d3ad328be22 479 Gene3D G3DSA:3.40.605.10 1 265 2.1E-92 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS13605 f7dec60d1bb7b981bf383d3ad328be22 479 SUPERFAMILY SSF53720 4 477 3.93E-158 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS13605 f7dec60d1bb7b981bf383d3ad328be22 479 Pfam PF00171 Aldehyde dehydrogenase family 22 475 6.1E-165 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS13605 f7dec60d1bb7b981bf383d3ad328be22 479 Gene3D G3DSA:3.40.309.10 266 445 6.5E-67 T 28-03-2018 CI104_RS13605 f7dec60d1bb7b981bf383d3ad328be22 479 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 278 289 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS13605 f7dec60d1bb7b981bf383d3ad328be22 479 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 250 257 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 SUPERFAMILY SSF48008 99 231 7.85E-25 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 Gene3D G3DSA:1.10.10.10 3 78 7.1E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 4.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 4.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 SMART SM00895 101 227 4.7E-22 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 SUPERFAMILY SSF46785 109 115 1.88E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 SUPERFAMILY SSF46785 9 80 1.88E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 Gene3D G3DSA:1.20.120.530 81 240 5.4E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 Pfam PF07729 FCD domain 101 226 8.7E-25 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 76 1.5E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14995 01316c732a5b9326da84c5cf32447a60 249 SMART SM00345 17 76 1.3E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS10435 9c7b2055d7399c8d4e20dafff6bc2841 232 Pfam PF13861 FlgD Tudor-like domain 88 229 3.8E-15 T 28-03-2018 IPR025963 FlgD Tudor-like domain CI104_RS10435 9c7b2055d7399c8d4e20dafff6bc2841 232 Pfam PF13860 FlgD Ig-like domain 119 189 4.0E-24 T 28-03-2018 IPR025965 FlgD Ig-like domain CI104_RS10435 9c7b2055d7399c8d4e20dafff6bc2841 232 Pfam PF03963 Flagellar hook capping protein - N-terminal region 12 80 6.4E-24 T 28-03-2018 IPR005648 Flagellar hook capping protein CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 SMART SM00347 31 132 1.1E-33 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 SUPERFAMILY SSF46785 5 143 4.85E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 Gene3D G3DSA:1.10.10.10 7 144 1.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 ProSitePatterns PS01117 MarR-type HTH domain signature. 70 104 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 Pfam PF01047 MarR family 38 96 4.8E-19 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 122 142 3.9E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 87 3.9E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 91 107 3.9E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12880 ecc29896f8589e3d26cd59e1a9f202ba 144 PRINTS PR00598 Bacterial regulatory protein MarR family signature 55 71 3.9E-25 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Gene3D G3DSA:3.90.740.10 228 410 1.7E-53 T 28-03-2018 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Gene3D G3DSA:3.40.50.620 411 647 9.4E-57 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 SUPERFAMILY SSF47323 662 859 5.98E-37 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Gene3D G3DSA:1.10.730.10 648 796 4.7E-31 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Hamap MF_00049_B Leucine--tRNA ligase [leuS]. 4 859 23.297 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Gene3D G3DSA:3.40.50.620 31 227 9.3E-46 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 SUPERFAMILY SSF52374 416 668 8.25E-141 T 28-03-2018 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 SUPERFAMILY SSF52374 5 226 8.25E-141 T 28-03-2018 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Pfam PF08264 Anticodon-binding domain of tRNA 701 822 2.9E-16 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Pfam PF13603 Leucyl-tRNA synthetase, Domain 2 221 403 1.4E-78 T 28-03-2018 IPR025709 Leucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 KEGG: 00970+6.1.1.4 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 TIGRFAM TIGR00396 leuS_bact: leucine--tRNA ligase 5 859 0.0 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 417 572 1.9E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 618 651 9.7E-7 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 15 171 1.4E-25 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 SUPERFAMILY SSF50677 226 415 2.62E-56 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 485 503 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 127 144 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 215 234 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 557 567 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 185 198 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 153 169 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 PRINTS PR00985 Leucyl-tRNA synthetase signature 524 546 4.1E-52 T 28-03-2018 IPR002302 Leucine-tRNA ligase GO:0000166|GO:0004823|GO:0005524|GO:0006429 KEGG: 00970+6.1.1.4|Reactome: R-HSA-379726 CI104_RS07570 5d20e7164161f4bb8a1b86a60a6efd99 860 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 42 53 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS12770 87bd08fb1f8868bc2f517203013e92da 445 Gene3D G3DSA:1.20.1250.20 247 444 1.1E-23 T 28-03-2018 CI104_RS12770 87bd08fb1f8868bc2f517203013e92da 445 SUPERFAMILY SSF103473 13 435 3.66E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12770 87bd08fb1f8868bc2f517203013e92da 445 Gene3D G3DSA:1.20.1250.20 13 233 1.0E-26 T 28-03-2018 CI104_RS12770 87bd08fb1f8868bc2f517203013e92da 445 Pfam PF00083 Sugar (and other) transporter 25 238 2.1E-26 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS12770 87bd08fb1f8868bc2f517203013e92da 445 Pfam PF07690 Major Facilitator Superfamily 252 433 4.9E-14 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS02390 425af55350971a0b839b86534a8de540 284 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 283 7.3E-98 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS02390 425af55350971a0b839b86534a8de540 284 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 131 142 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS02390 425af55350971a0b839b86534a8de540 284 SUPERFAMILY SSF51569 1 283 1.9E-97 T 28-03-2018 CI104_RS02390 425af55350971a0b839b86534a8de540 284 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 283 3.4E-104 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS02390 425af55350971a0b839b86534a8de540 284 PIRSF PIRSF001359 1 284 7.2E-112 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS02390 425af55350971a0b839b86534a8de540 284 TIGRFAM TIGR01858 tag_bisphos_ald: class II aldolase, tagatose bisphosphate family 3 284 1.5E-146 T 28-03-2018 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY GO:0005975|GO:0008270|GO:0009025 KEGG: 00052+4.1.2.40|MetaCyc: PWY-7077|MetaCyc: PWY-7395 CI104_RS02390 425af55350971a0b839b86534a8de540 284 Gene3D G3DSA:3.20.20.70 1 284 1.7E-102 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS10795 7b95cbd6a4d7b2658fce84770c437f36 475 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 182 356 1.3E-31 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CI104_RS10795 7b95cbd6a4d7b2658fce84770c437f36 475 Pfam PF17482 Phage tail sheath C-terminal domain 368 464 1.3E-13 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 Gene3D G3DSA:3.40.50.620 1 156 4.8E-15 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 PRINTS PR01438 Universal stress protein signature 158 176 5.5E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 PRINTS PR01438 Universal stress protein signature 235 247 5.5E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 PRINTS PR01438 Universal stress protein signature 253 275 5.5E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 Pfam PF00582 Universal stress protein family 207 275 4.5E-11 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 Pfam PF00582 Universal stress protein family 4 152 1.6E-14 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 SUPERFAMILY SSF52402 3 152 7.28E-16 T 28-03-2018 CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 SUPERFAMILY SSF52402 159 275 5.19E-23 T 28-03-2018 CI104_RS27200 7e7b594bbec3183abeb1286583b45231 275 Gene3D G3DSA:3.40.50.620 157 275 4.4E-21 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 65 5.1E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 39 55 4.4E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 25 39 4.4E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 SMART SM00866 86 225 6.4E-34 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 Gene3D G3DSA:1.10.10.10 1 64 1.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 SMART SM00345 6 65 1.5E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 SUPERFAMILY SSF64288 53 232 1.02E-47 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 Pfam PF07702 UTRA domain 86 224 1.4E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 Gene3D G3DSA:3.40.1410.10 65 233 7.8E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS00090 645972202552a43178f386a6abaa2f7b 238 SUPERFAMILY SSF46785 2 69 1.26E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05990 31cb20a9f68bd2bf14c4b818ffe8dc09 283 Pfam PF02668 Taurine catabolism dioxygenase TauD, TfdA family 7 272 2.1E-68 T 28-03-2018 IPR003819 TauD/TfdA-like domain GO:0016491|GO:0055114 Reactome: R-HSA-71262 CI104_RS05990 31cb20a9f68bd2bf14c4b818ffe8dc09 283 SUPERFAMILY SSF51197 5 281 3.21E-100 T 28-03-2018 CI104_RS05990 31cb20a9f68bd2bf14c4b818ffe8dc09 283 Gene3D G3DSA:3.60.130.10 1 283 2.9E-86 T 28-03-2018 CI104_RS16385 983510f41b188be9218584e735b73344 327 SUPERFAMILY SSF160355 54 292 3.27E-63 T 28-03-2018 CI104_RS16385 983510f41b188be9218584e735b73344 327 Pfam PF02706 Chain length determinant protein 17 122 3.5E-20 T 28-03-2018 IPR003856 Polysaccharide chain length determinant N-terminal domain GO:0009103|GO:0016020 CI104_RS16385 983510f41b188be9218584e735b73344 327 Gene3D G3DSA:3.30.1890.10 224 294 7.7E-11 T 28-03-2018 CI104_RS16385 983510f41b188be9218584e735b73344 327 Gene3D G3DSA:3.30.1890.10 52 223 3.4E-35 T 28-03-2018 CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 Pfam PF13444 Acetyltransferase (GNAT) domain 322 422 8.0E-25 T 28-03-2018 CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 SUPERFAMILY SSF55729 312 464 3.81E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 Gene3D G3DSA:3.40.630.30 302 479 3.3E-25 T 28-03-2018 CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 Gene3D G3DSA:3.40.1130.10 20 265 3.4E-34 T 28-03-2018 CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 Pfam PF01553 Acyltransferase 66 191 2.4E-11 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 SUPERFAMILY SSF69593 40 260 1.24E-14 T 28-03-2018 CI104_RS05995 c1cd8ec5e81837eee0a29ad78aa74b42 575 SMART SM00563 77 194 8.6E-7 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS02855 3d1fa13bfd5b514aaac2c98a65772e1f 293 Gene3D G3DSA:3.20.20.140 2 293 1.5E-52 T 28-03-2018 CI104_RS02855 3d1fa13bfd5b514aaac2c98a65772e1f 293 Pfam PF04909 Amidohydrolase 23 288 2.1E-48 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS02855 3d1fa13bfd5b514aaac2c98a65772e1f 293 SUPERFAMILY SSF51556 18 288 6.47E-77 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS00460 4181cf83cf26ea2fecc18adef347d76c 91 SUPERFAMILY SSF63562 1 79 8.2E-25 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CI104_RS00460 4181cf83cf26ea2fecc18adef347d76c 91 Gene3D G3DSA:3.90.940.10 1 91 5.9E-28 T 28-03-2018 IPR012293 RNA polymerase subunit, RPB6/omega GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CI104_RS00460 4181cf83cf26ea2fecc18adef347d76c 91 Hamap MF_00366 DNA-directed RNA polymerase subunit omega [rpoZ]. 1 62 16.321 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS00460 4181cf83cf26ea2fecc18adef347d76c 91 TIGRFAM TIGR00690 rpoZ: DNA-directed RNA polymerase, omega subunit 1 60 1.7E-30 T 28-03-2018 IPR003716 DNA-directed RNA polymerase, omega subunit GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS00460 4181cf83cf26ea2fecc18adef347d76c 91 SMART SM01409 8 61 1.3E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CI104_RS00460 4181cf83cf26ea2fecc18adef347d76c 91 Pfam PF01192 RNA polymerase Rpb6 10 59 1.9E-15 T 28-03-2018 IPR006110 RNA polymerase, subunit omega/K/RPB6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6|Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167161|Reactome: R-HSA-167162|Reactome: R-HSA-167172|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-168325|Reactome: R-HSA-1834949|Reactome: R-HSA-203927|Reactome: R-HSA-427413|Reactome: R-HSA-452723|Reactome: R-HSA-5250924|Reactome: R-HSA-5578749|Reactome: R-HSA-5601884|Reactome: R-HSA-5617472|Reactome: R-HSA-674695|Reactome: R-HSA-6781823|Reactome: R-HSA-6781827|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-6796648|Reactome: R-HSA-6803529|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-72163|Reactome: R-HSA-72165|Reactome: R-HSA-72203|Reactome: R-HSA-73762|Reactome: R-HSA-73772|Reactome: R-HSA-73776|Reactome: R-HSA-73777|Reactome: R-HSA-73779|Reactome: R-HSA-73780|Reactome: R-HSA-73863|Reactome: R-HSA-73980|Reactome: R-HSA-749476|Reactome: R-HSA-75953|Reactome: R-HSA-75955|Reactome: R-HSA-76042|Reactome: R-HSA-76061|Reactome: R-HSA-76066|Reactome: R-HSA-76071|Reactome: R-HSA-77075|Reactome: R-HSA-8851708 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 Gene3D G3DSA:3.30.70.580 67 146 2.0E-17 T 28-03-2018 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 Gene3D G3DSA:3.30.70.1560 147 208 7.0E-24 T 28-03-2018 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 105 119 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 SUPERFAMILY SSF55174 8 63 6.9E-14 T 28-03-2018 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 SMART SM00363 8 64 3.9E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 74 227 2.2E-54 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 Pfam PF00849 RNA pseudouridylate synthase 70 196 1.2E-15 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 SUPERFAMILY SSF55120 70 230 1.25E-38 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 Gene3D G3DSA:3.10.290.10 5 66 4.8E-18 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS23530 07a922377fe3dac0db32a31e7715f6b6 292 Pfam PF01479 S4 domain 9 53 7.7E-13 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 Gene3D G3DSA:1.10.3210.10 3 262 5.3E-54 T 28-03-2018 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 Pfam PF13286 Phosphohydrolase-associated domain 476 499 1.2E-4 T 28-03-2018 IPR026875 Phosphohydrolase-associated domain CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 TIGRFAM TIGR01353 dGTP_triPase: putative dGTPase 30 502 1.9E-143 T 28-03-2018 IPR006261 dNTP triphosphohydrolase GO:0016793 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 SMART SM00471 62 282 6.4E-11 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 Pfam PF01966 HD domain 66 146 1.0E-9 T 28-03-2018 IPR006674 HD domain CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 Gene3D G3DSA:1.10.3410.10 263 390 4.4E-24 T 28-03-2018 IPR023293 Deoxyguanosinetriphosphate triphosphohydrolase, central domain CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 Hamap MF_00030 Deoxyguanosinetriphosphate triphosphohydrolase [dgt]. 1 504 51.208 T 28-03-2018 IPR020779 dNTP triphosphohydrolase, type 1 GO:0000287|GO:0006203|GO:0008832 KEGG: 00230+3.1.5.1 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 SUPERFAMILY SSF109604 251 432 7.33E-67 T 28-03-2018 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 SUPERFAMILY SSF109604 31 134 7.33E-67 T 28-03-2018 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 SUPERFAMILY SSF109604 182 215 7.33E-67 T 28-03-2018 CI104_RS05250 030ddac2881a94ab89e6a53f2aa38daa 505 SUPERFAMILY SSF109604 483 501 7.33E-67 T 28-03-2018 CI104_RS11925 f5cc84fbb94affbc6722b307c9bc9f2b 272 SMART SM00342 174 253 0.0015 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS11925 f5cc84fbb94affbc6722b307c9bc9f2b 272 Pfam PF12833 Helix-turn-helix domain 180 255 6.2E-13 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS11925 f5cc84fbb94affbc6722b307c9bc9f2b 272 Gene3D G3DSA:1.10.10.60 209 267 9.9E-4 T 28-03-2018 CI104_RS11925 f5cc84fbb94affbc6722b307c9bc9f2b 272 Gene3D G3DSA:1.10.10.60 136 208 0.091 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 TIGRFAM TIGR00551 nadB: L-aspartate oxidase 8 520 1.1E-235 T 28-03-2018 IPR005288 L-aspartate oxidase GO:0005737|GO:0008734|GO:0009435|GO:0055114 KEGG: 00250+1.4.3.16|KEGG: 00760+1.4.3.16|MetaCyc: PWY-5316|MetaCyc: PWY-7342 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 Pfam PF00890 FAD binding domain 10 392 2.4E-103 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 SUPERFAMILY SSF56425 238 353 4.64E-40 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 PIRSF PIRSF000171 339 532 2.9E-14 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 PIRSF PIRSF000171 1 257 1.7E-21 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 Pfam PF02910 Fumarate reductase flavoprotein C-term 441 520 6.9E-14 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 Gene3D G3DSA:1.20.58.100 439 539 7.5E-28 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 355 377 6.6E-11 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 6.6E-11 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 370 377 4.2E-5 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 4.2E-5 T 28-03-2018 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 Gene3D G3DSA:3.50.50.60 2 438 2.0E-71 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 SUPERFAMILY SSF51905 356 447 1.65E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 SUPERFAMILY SSF51905 4 255 1.65E-74 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18855 29672b6a363d882ccd08aa5f7b779153 540 SUPERFAMILY SSF46977 425 525 9.94E-32 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 SMART SM00382 288 483 0.68 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 SMART SM00382 38 233 1.2E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 Gene3D G3DSA:3.40.50.300 263 503 4.3E-33 T 28-03-2018 CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 Pfam PF00005 ABC transporter 29 178 6.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 Pfam PF00005 ABC transporter 280 434 6.2E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 SUPERFAMILY SSF52540 12 236 5.73E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 SUPERFAMILY SSF52540 253 487 3.49E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16865 cca1f9ff8dacc0d666ddc5965b363cd7 506 Gene3D G3DSA:3.40.50.300 2 240 1.9E-51 T 28-03-2018 CI104_RS17145 f983565f742350536da446c20863e26d 206 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS17145 f983565f742350536da446c20863e26d 206 SMART SM00382 26 205 2.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17145 f983565f742350536da446c20863e26d 206 Gene3D G3DSA:3.40.50.300 1 203 1.5E-40 T 28-03-2018 CI104_RS17145 f983565f742350536da446c20863e26d 206 Pfam PF00005 ABC transporter 18 154 1.6E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS17145 f983565f742350536da446c20863e26d 206 SUPERFAMILY SSF52540 2 190 1.11E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17145 f983565f742350536da446c20863e26d 206 TIGRFAM TIGR01189 ccmA: heme ABC exporter, ATP-binding protein CcmA 2 197 2.8E-83 T 28-03-2018 IPR005895 ABC transporter, haem export, CcmA GO:0005215|GO:0017004|GO:0030288 CI104_RS08195 04255a69861ee833a15329986337abd5 262 SUPERFAMILY SSF50331 200 259 3.19E-13 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS08195 04255a69861ee833a15329986337abd5 262 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 20 83 7.8E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS08195 04255a69861ee833a15329986337abd5 262 Pfam PF03459 TOBE domain 125 187 2.5E-12 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CI104_RS08195 04255a69861ee833a15329986337abd5 262 Pfam PF03459 TOBE domain 199 257 9.8E-12 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CI104_RS08195 04255a69861ee833a15329986337abd5 262 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 123 191 2.1E-27 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CI104_RS08195 04255a69861ee833a15329986337abd5 262 Gene3D G3DSA:1.10.10.10 1 107 8.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08195 04255a69861ee833a15329986337abd5 262 SUPERFAMILY SSF46785 2 106 4.29E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08195 04255a69861ee833a15329986337abd5 262 SUPERFAMILY SSF50331 123 192 2.26E-17 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS08195 04255a69861ee833a15329986337abd5 262 Gene3D G3DSA:2.40.50.100 185 252 2.1E-11 T 28-03-2018 CI104_RS08195 04255a69861ee833a15329986337abd5 262 Gene3D G3DSA:2.40.50.100 108 184 1.8E-17 T 28-03-2018 CI104_RS08195 04255a69861ee833a15329986337abd5 262 TIGRFAM TIGR00637 ModE_repress: ModE molybdate transport repressor domain 16 113 1.5E-39 T 28-03-2018 IPR003725 Molybdenum-binding protein ModE, N-terminal CI104_RS08195 04255a69861ee833a15329986337abd5 262 PIRSF PIRSF005763 1 262 9.9E-98 T 28-03-2018 IPR016462 Molybdate-dependent transcriptional regulator ModE GO:0006355|GO:0015689|GO:0030151 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 168 324 9.5E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 2.4E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 207 234 2.4E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 236 265 2.4E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 130 159 2.4E-44 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 SMART SM00283 109 356 2.8E-67 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 SUPERFAMILY SSF58104 76 357 4.97E-61 T 28-03-2018 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 Gene3D G3DSA:1.10.287.950 57 163 9.7E-11 T 28-03-2018 CI104_RS13765 f6b4a7dbaac3abdfd4188fffd1362d60 377 Gene3D G3DSA:1.10.287.950 164 360 6.6E-45 T 28-03-2018 CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 SMART SM00829 9 343 0.0014 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 Gene3D G3DSA:3.40.50.720 152 340 7.9E-28 T 28-03-2018 CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 SUPERFAMILY SSF51735 142 310 1.48E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 138 3.8E-29 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 SUPERFAMILY SSF50129 7 178 1.07E-47 T 28-03-2018 IPR011032 GroES-like CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 64 78 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 Pfam PF00107 Zinc-binding dehydrogenase 180 302 5.1E-23 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS11660 09bd17eabdc561bc6293bc539d8858f3 347 Gene3D G3DSA:3.90.180.10 2 151 8.9E-43 T 28-03-2018 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 Gene3D G3DSA:1.10.1220.10 1 37 3.8E-25 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 Hamap MF_00908 Negative modulator of initiation of replication [seqA]. 1 181 45.988 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 SUPERFAMILY SSF82808 66 181 7.45E-50 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 PIRSF PIRSF019401 1 181 3.3E-51 T 28-03-2018 IPR005621 Negative modulator of initiation of replication SeqA GO:0003677|GO:0032297 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 Gene3D G3DSA:1.20.1380.10 75 177 9.0E-45 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 Pfam PF03925 SeqA protein C-terminal domain 71 179 1.1E-50 T 28-03-2018 IPR026577 Replication modulator SeqA, C-terminal DNA-binding domain GO:0003677 CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 Pfam PF17206 SeqA protein N-terminal domain 1 35 1.7E-23 T 28-03-2018 IPR033761 Negative modulator of initiation of replication SeqA, N-terminal CI104_RS07765 e664c622f7f8884f74840069d81a6859 181 SUPERFAMILY SSF47598 1 35 4.78E-14 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS22805 96fc4cd8f36408e97cd038373a7d4817 121 Gene3D G3DSA:1.10.10.10 30 104 6.9E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22805 96fc4cd8f36408e97cd038373a7d4817 121 Pfam PF04703 FaeA-like protein 56 95 5.6E-7 T 28-03-2018 IPR006793 FaeA-like protein GO:0006355|GO:0009289 CI104_RS22805 96fc4cd8f36408e97cd038373a7d4817 121 SUPERFAMILY SSF46785 44 104 8.73E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 Pfam PF05239 PRC-barrel domain 104 177 1.6E-9 T 28-03-2018 IPR027275 PRC-barrel domain CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 Pfam PF01782 RimM N-terminal domain 16 96 1.9E-26 T 28-03-2018 IPR002676 RimM protein GO:0006364 CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 Gene3D G3DSA:2.40.30.60 12 100 2.9E-27 T 28-03-2018 IPR002676 RimM protein GO:0006364 CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 TIGRFAM TIGR02273 16S_RimM: 16S rRNA processing protein RimM 14 182 3.7E-62 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 SUPERFAMILY SSF50346 106 182 1.47E-19 T 28-03-2018 IPR011033 PRC-barrel-like CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 Hamap MF_00014 Ribosome maturation factor RimM [rimM]. 13 182 24.696 T 28-03-2018 IPR011961 16S rRNA processing protein RimM GO:0005840|GO:0006364|GO:0043022 CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 Gene3D G3DSA:2.30.30.240 102 177 1.2E-22 T 28-03-2018 CI104_RS19025 199ff117565a2b2f5a027db337ecadab 182 SUPERFAMILY SSF50447 12 100 1.59E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS23320 465d487fcb09e6bcec63732fc7123732 116 Pfam PF04237 YjbR 12 101 4.5E-17 T 28-03-2018 IPR007351 Uncharacterised protein YjbR CI104_RS23320 465d487fcb09e6bcec63732fc7123732 116 SUPERFAMILY SSF142906 1 115 1.05E-34 T 28-03-2018 CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 SUPERFAMILY SSF53271 252 485 2.1E-72 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 Pfam PF00156 Phosphoribosyl transferase domain 286 394 1.3E-7 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 Gene3D G3DSA:3.60.20.10 45 278 3.3E-55 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 Hamap MF_01931 Amidophosphoribosyltransferase [purF]. 1 466 44.847 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 Pfam PF13522 Glutamine amidotransferase domain 63 202 6.7E-16 T 28-03-2018 CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 TIGRFAM TIGR01134 purF: amidophosphoribosyltransferase 2 466 1.9E-163 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 Gene3D G3DSA:3.40.50.2020 279 446 3.1E-38 T 28-03-2018 CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 SUPERFAMILY SSF56235 2 259 1.89E-74 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS17705 779943fbb007440e19ee5929bf4e46a6 505 PIRSF PIRSF000485 1 483 8.3E-174 T 28-03-2018 IPR005854 Amidophosphoribosyltransferase GO:0004044|GO:0009113 KEGG: 00230+2.4.2.14|KEGG: 00250+2.4.2.14|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|MetaCyc: PWY-7282|Reactome: R-HSA-73817 CI104_RS00075 d8af9bb93cdf208b725bf8c3c17939c3 137 Gene3D G3DSA:2.60.40.790 5 137 7.4E-21 T 28-03-2018 IPR008978 HSP20-like chaperone CI104_RS00075 d8af9bb93cdf208b725bf8c3c17939c3 137 Hamap MF_02000 Small heat shock protein IbpA [ibpA]. 1 137 50.281 T 28-03-2018 IPR023728 Small heat shock protein IbpA CI104_RS00075 d8af9bb93cdf208b725bf8c3c17939c3 137 SUPERFAMILY SSF49764 30 137 6.98E-20 T 28-03-2018 IPR008978 HSP20-like chaperone CI104_RS00075 d8af9bb93cdf208b725bf8c3c17939c3 137 Pfam PF00011 Hsp20/alpha crystallin family 42 137 1.0E-22 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CI104_RS14580 c3cd2bcfb48e24a9cc457923d211f26f 210 SUPERFAMILY SSF101473 3 205 1.05E-57 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CI104_RS14580 c3cd2bcfb48e24a9cc457923d211f26f 210 TIGRFAM TIGR02365 dha_L_ycgS: dihydroxyacetone kinase, L subunit 9 205 3.3E-81 T 28-03-2018 IPR012737 Dihydroxyacetone kinase, subunit L GO:0016772 CI104_RS14580 c3cd2bcfb48e24a9cc457923d211f26f 210 Pfam PF02734 DAK2 domain 32 205 3.8E-55 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CI104_RS14580 c3cd2bcfb48e24a9cc457923d211f26f 210 SMART SM01120 32 206 8.3E-81 T 28-03-2018 IPR004007 DhaL domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CI104_RS23110 c55be5bfc6ae5567f118a8eb47c37533 228 SMART SM00382 35 218 7.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23110 c55be5bfc6ae5567f118a8eb47c37533 228 Pfam PF00005 ABC transporter 26 180 1.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23110 c55be5bfc6ae5567f118a8eb47c37533 228 SUPERFAMILY SSF52540 3 225 8.77E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23110 c55be5bfc6ae5567f118a8eb47c37533 228 ProSitePatterns PS00211 ABC transporters family signature. 152 166 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23110 c55be5bfc6ae5567f118a8eb47c37533 228 TIGRFAM TIGR02324 CP_lyasePhnL: phosphonate C-P lyase system protein PhnL 4 220 4.6E-110 T 28-03-2018 IPR012701 Phosphonate C-P lyase system, PhnL KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23110 c55be5bfc6ae5567f118a8eb47c37533 228 Gene3D G3DSA:3.40.50.300 1 226 2.4E-45 T 28-03-2018 CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 SUPERFAMILY SSF81340 9 398 3.53E-42 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 Hamap MF_01115 Putative ion-transport protein YfeO [yfeO]. 9 410 38.013 T 28-03-2018 IPR022969 Chloride channel YfeO CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 Pfam PF00654 Voltage gated chloride channel 66 391 3.1E-21 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 Gene3D G3DSA:1.10.3080.10 4 399 1.1E-32 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 PRINTS PR00762 Chloride channel signature 320 340 3.4E-7 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 PRINTS PR00762 Chloride channel signature 153 172 3.4E-7 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS17985 59f3c2ada0969f41c9d6b509de99bbae 411 PRINTS PR00762 Chloride channel signature 103 122 3.4E-7 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS09080 d3691b151e2308005738bc8d9c8a8790 248 SUPERFAMILY SSF53448 3 245 3.38E-66 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS09080 d3691b151e2308005738bc8d9c8a8790 248 Hamap MF_00057 8-amino-3,8-dideoxy-manno-octulosonate cytidylyltransferase [kdsB]. 1 248 45.965 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CI104_RS09080 d3691b151e2308005738bc8d9c8a8790 248 TIGRFAM TIGR00466 kdsB: 3-deoxy-D-manno-octulosonate cytidylyltransferase 1 241 2.3E-135 T 28-03-2018 IPR004528 3-deoxy-D-manno-octulosonate cytidylyltransferase GO:0005737|GO:0008690 KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269 CI104_RS09080 d3691b151e2308005738bc8d9c8a8790 248 Gene3D G3DSA:3.90.550.10 1 248 3.9E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS09080 d3691b151e2308005738bc8d9c8a8790 248 Pfam PF02348 Cytidylyltransferase 4 221 3.5E-72 T 28-03-2018 IPR003329 Acylneuraminate cytidylyltransferase KEGG: 00540+2.7.7.38|MetaCyc: PWY-1269|Reactome: R-HSA-4085001 CI104_RS19930 9d3f69c6f921291e8e526be3f84fed1a 208 Gene3D G3DSA:3.40.50.150 8 206 3.0E-37 T 28-03-2018 CI104_RS19930 9d3f69c6f921291e8e526be3f84fed1a 208 Pfam PF01135 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT) 6 206 5.9E-81 T 28-03-2018 CI104_RS19930 9d3f69c6f921291e8e526be3f84fed1a 208 Hamap MF_00090 Protein-L-isoaspartate O-methyltransferase [pcm]. 1 208 39.18 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CI104_RS19930 9d3f69c6f921291e8e526be3f84fed1a 208 ProSitePatterns PS01279 Protein-L-isoaspartate(D-aspartate) O-methyltransferase signature. 130 145 - T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CI104_RS19930 9d3f69c6f921291e8e526be3f84fed1a 208 SUPERFAMILY SSF53335 11 204 1.17E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS19930 9d3f69c6f921291e8e526be3f84fed1a 208 TIGRFAM TIGR00080 pimt: protein-L-isoaspartate O-methyltransferase 2 207 1.2E-97 T 28-03-2018 IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase GO:0004719|GO:0006464 CI104_RS19540 8d5a796a40531f7143430588448378d2 149 Pfam PF06610 L-alanine exporter 4 141 1.9E-67 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CI104_RS19540 8d5a796a40531f7143430588448378d2 149 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 1 144 34.152 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CI104_RS19540 8d5a796a40531f7143430588448378d2 149 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 8 141 8.0E-67 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 SUPERFAMILY SSF53218 2 203 9.42E-36 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 Hamap MF_00226_B Putative competence-damage inducible protein [cinA]. 1 398 117.511 T 28-03-2018 IPR008135 Competence-induced protein CinA CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 PIRSF PIRSF006728 1 384 2.8E-110 T 28-03-2018 IPR008135 Competence-induced protein CinA CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 Pfam PF00994 Probable molybdopterin binding domain 6 170 9.5E-32 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 SUPERFAMILY SSF142433 250 378 1.96E-6 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 3 167 2.6E-37 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 TIGRFAM TIGR00200 cinA_nterm: competence/damage-inducible protein CinA N-terminal domain 1 397 3.1E-172 T 28-03-2018 IPR008135 Competence-induced protein CinA CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 Gene3D G3DSA:3.90.950.20 243 377 0.0039 T 28-03-2018 CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 Gene3D G3DSA:3.40.980.10 1 172 1.6E-38 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS17380 c9ff117acb967ad12bebcd25089dad21 398 SMART SM00852 5 172 3.8E-37 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 119 136 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 Gene3D G3DSA:3.40.190.10 137 275 1.6E-32 T 28-03-2018 CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 TIGRFAM TIGR01276 thiB: thiamin/thiamin pyrophosphate ABC transporter, thiamin/thiamin pyrophospate-binding protein 6 327 1.7E-184 T 28-03-2018 IPR005967 Thiamin/thiamin pyrophosphate ABC transporter, substrate-binding protein, Proteobacteria GO:0015888|GO:0030288|GO:0030975 CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 SUPERFAMILY SSF53850 22 323 7.77E-64 T 28-03-2018 CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 TIGRFAM TIGR01254 sfuA: ABC transporter periplasmic binding protein, thiB subfamily 18 321 2.9E-152 T 28-03-2018 IPR005948 Thiamine/thiamin pyrophosphate-binding periplasmic protein, ABC transporter GO:0015888|GO:0030288|GO:0030975 CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 Pfam PF13343 Bacterial extracellular solute-binding protein 73 289 1.6E-18 T 28-03-2018 CI104_RS04795 0a1fddd0b8922154e245f7728b6bdcfe 327 Gene3D G3DSA:3.40.190.10 16 136 4.9E-4 T 28-03-2018 CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 PIRSF PIRSF006246 1 125 3.4E-52 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 TIGRFAM TIGR00223 panD: aspartate 1-decarboxylase 1 126 2.3E-67 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 Hamap MF_00446 Aspartate 1-decarboxylase [panD]. 1 126 71.136 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 SUPERFAMILY SSF50692 1 121 6.3E-48 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 Gene3D G3DSA:2.40.40.20 1 117 2.3E-52 T 28-03-2018 CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 ProDom PD009294 ASPARTATE 1-DECARBOXYLASE DECARBOXYLASE CHAIN LYASE ALPHA ALPHA- CONTAINS: PRECURSOR BETA 5 123 1.0E-63 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CI104_RS05145 2722d1dd960cf527c50addd099d8e2db 126 Pfam PF02261 Aspartate decarboxylase 1 114 6.6E-48 T 28-03-2018 IPR003190 Aspartate decarboxylase GO:0004068|GO:0006523 KEGG: 00410+4.1.1.11|KEGG: 00770+4.1.1.11|MetaCyc: PWY-5155 CI104_RS15510 2fabeeae5944ec99ebe66ee146ebace2 796 Pfam PF13953 PapC C-terminal domain 718 776 1.2E-7 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS15510 2fabeeae5944ec99ebe66ee146ebace2 796 Pfam PF00577 Outer membrane usher protein 228 698 1.2E-33 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS15510 2fabeeae5944ec99ebe66ee146ebace2 796 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 279 289 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 Hamap MF_00916 Epoxyqueuosine reductase [queG]. 7 315 51.341 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 Pfam PF08331 Domain of unknown function (DUF1730) 62 140 3.1E-24 T 28-03-2018 IPR013542 Domain of unknown function DUF1730 MetaCyc: PWY-6700 CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 Pfam PF13484 4Fe-4S double cluster binding domain 193 256 1.2E-18 T 28-03-2018 CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 Gene3D G3DSA:3.30.70.20 200 365 5.5E-10 T 28-03-2018 CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 TIGRFAM TIGR00276 TIGR00276: epoxyqueuosine reductase 14 348 1.9E-153 T 28-03-2018 IPR004453 Epoxyqueuosine reductase QueG GO:0008033|GO:0008616|GO:0016491 MetaCyc: PWY-6700 CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 193 204 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 SUPERFAMILY SSF46548 139 256 4.6E-18 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS22565 3dcf23dae16581bfd79d230737265920 379 Gene3D G3DSA:3.30.70.20 41 199 0.0014 T 28-03-2018 CI104_RS24225 46298e82821691bdef777d2592646da6 232 SMART SM00862 152 228 2.1E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS24225 46298e82821691bdef777d2592646da6 232 Pfam PF00072 Response regulator receiver domain 4 112 1.8E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS24225 46298e82821691bdef777d2592646da6 232 SMART SM00448 2 111 6.6E-46 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS24225 46298e82821691bdef777d2592646da6 232 SUPERFAMILY SSF52172 2 188 9.96E-42 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS24225 46298e82821691bdef777d2592646da6 232 Gene3D G3DSA:1.10.10.10 120 232 5.4E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24225 46298e82821691bdef777d2592646da6 232 Pfam PF00486 Transcriptional regulatory protein, C terminal 152 228 2.5E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS24225 46298e82821691bdef777d2592646da6 232 Gene3D G3DSA:3.40.50.2300 2 119 1.5E-38 T 28-03-2018 CI104_RS22485 d7d70504d2d218e5115d8f16f5caa3c2 95 Gene3D G3DSA:3.30.1660.10 36 94 5.4E-19 T 28-03-2018 IPR025543 Dodecin-like CI104_RS22485 d7d70504d2d218e5115d8f16f5caa3c2 95 Pfam PF07338 Protein of unknown function (DUF1471) 39 94 7.4E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS22485 d7d70504d2d218e5115d8f16f5caa3c2 95 SUPERFAMILY SSF159871 13 94 4.19E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 SUPERFAMILY SSF46689 4 67 1.75E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 68 200 2.3E-41 T 28-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 7.0E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 SUPERFAMILY SSF48498 68 201 1.56E-39 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 Gene3D G3DSA:1.10.10.60 1 66 1.3E-16 T 28-03-2018 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 Gene3D G3DSA:1.10.357.10 67 207 2.5E-23 T 28-03-2018 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 95 118 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 130 149 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 75 94 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 21 44 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS25775 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 183 197 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 SUPERFAMILY SSF46689 4 67 1.75E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 Pfam PF02909 Tetracyclin repressor, C-terminal all-alpha domain 68 200 2.3E-41 T 28-03-2018 IPR004111 Tetracycline transcriptional regulator, TetR, C-terminal GO:0045892 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 30 53 4.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 9 22 4.1E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 Pfam PF00440 Bacterial regulatory proteins, tetR family 10 55 7.0E-13 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 SUPERFAMILY SSF48498 68 201 1.56E-39 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 Gene3D G3DSA:1.10.10.60 1 66 1.3E-16 T 28-03-2018 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 ProSitePatterns PS01081 TetR-type HTH domain signature. 21 52 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 Gene3D G3DSA:1.10.357.10 67 207 2.5E-23 T 28-03-2018 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 95 118 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 130 149 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 75 94 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 21 44 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS27425 a1b78bf1da02a669460d250b9e2860a5 218 PRINTS PR00400 Tetracycline repressor protein signature 183 197 5.8E-58 T 28-03-2018 IPR003012 Tetracycline transcriptional regulator, TetR GO:0045892|GO:0046677 CI104_RS04430 72c3acd286f351310574627e0601d259 229 SUPERFAMILY SSF46894 126 226 7.37E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS04430 72c3acd286f351310574627e0601d259 229 Pfam PF00072 Response regulator receiver domain 6 115 1.1E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS04430 72c3acd286f351310574627e0601d259 229 Gene3D G3DSA:1.10.10.10 123 228 3.5E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04430 72c3acd286f351310574627e0601d259 229 SMART SM00448 4 115 1.7E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS04430 72c3acd286f351310574627e0601d259 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 226 3.0E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS04430 72c3acd286f351310574627e0601d259 229 SMART SM00862 150 226 3.7E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS04430 72c3acd286f351310574627e0601d259 229 Gene3D G3DSA:3.40.50.2300 1 122 6.2E-33 T 28-03-2018 CI104_RS04430 72c3acd286f351310574627e0601d259 229 SUPERFAMILY SSF52172 2 129 1.05E-37 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS09075 550d332d6182bee933094d9c1bcd29d9 60 SUPERFAMILY SSF158997 1 54 1.44E-19 T 28-03-2018 CI104_RS09075 550d332d6182bee933094d9c1bcd29d9 60 Hamap MF_01187 UPF0434 protein YcaR [ycaR]. 1 54 25.679 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CI104_RS09075 550d332d6182bee933094d9c1bcd29d9 60 Pfam PF03966 Trm112p-like protein 2 41 1.7E-8 T 28-03-2018 IPR005651 Uncharacterised protein family UPF0434/Trm112 CI104_RS09075 550d332d6182bee933094d9c1bcd29d9 60 Gene3D G3DSA:2.20.25.10 8 60 9.4E-18 T 28-03-2018 CI104_RS11390 92a096e4cce25ce5c9ff3a51149072f3 434 SUPERFAMILY SSF49401 277 434 2.93E-8 T 28-03-2018 IPR008966 Adhesion domain CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 501 529 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 SUPERFAMILY SSF53955 479 641 1.34E-52 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 Pfam PF14718 Soluble lytic murein transglycosylase L domain 407 472 1.6E-22 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 SUPERFAMILY SSF48435 28 477 1.01E-135 T 28-03-2018 IPR016026 Lytic transglycosylase, superhelical U-shaped and linker domain GO:0004553|GO:0042597 CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 Gene3D G3DSA:1.10.530.10 473 645 2.7E-42 T 28-03-2018 CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 Gene3D G3DSA:1.10.1240.20 404 472 2.5E-19 T 28-03-2018 IPR012289 Lytic transglycosylase, superhelical linker GO:0004553|GO:0042597 CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 Gene3D G3DSA:1.25.20.10 28 390 3.5E-50 T 28-03-2018 CI104_RS04400 5dfe1c49ff2bf60a301a76f86a918d78 645 Pfam PF01464 Transglycosylase SLT domain 484 595 5.7E-34 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 SMART SM00244 18 176 7.5E-60 T 28-03-2018 IPR001107 Band 7 domain CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 PRINTS PR00721 Stomatin signature 108 125 1.0E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 PRINTS PR00721 Stomatin signature 73 94 1.0E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 PRINTS PR00721 Stomatin signature 171 192 1.0E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 PRINTS PR00721 Stomatin signature 152 170 1.0E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 PRINTS PR00721 Stomatin signature 128 151 1.0E-27 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 Pfam PF16200 C-terminal region of band_7 238 297 2.2E-7 T 28-03-2018 IPR032435 Band 7, C-terminal extension Reactome: R-HSA-8949664 CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 ProSitePatterns PS01270 Band 7 protein family signature. 132 160 - T 28-03-2018 IPR018080 Band 7/stomatin-like, conserved site CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 SUPERFAMILY SSF117892 49 183 1.83E-41 T 28-03-2018 IPR001107 Band 7 domain CI104_RS06915 d7888a85db2c3782934638f8b657a6cb 304 Pfam PF01145 SPFH domain / Band 7 family 22 203 8.0E-34 T 28-03-2018 IPR001107 Band 7 domain CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 Pfam PF00633 Helix-hairpin-helix motif 100 127 4.6E-7 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 187 203 1.1E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 SMART SM00525 186 206 4.4E-5 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 TIGRFAM TIGR01083 nth: endonuclease III 4 194 1.6E-89 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 SMART SM00478 38 185 1.0E-52 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 PIRSF PIRSF001435 1 210 9.4E-51 T 28-03-2018 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 Gene3D G3DSA:1.10.340.30 25 116 2.1E-22 T 28-03-2018 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 Hamap MF_00942 Endonuclease III [nth]. 1 209 37.226 T 28-03-2018 IPR005759 Endonuclease III GO:0003906|GO:0006284 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 34 168 6.0E-19 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 SUPERFAMILY SSF48150 3 208 2.67E-72 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 187 203 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 Gene3D G3DSA:1.10.1670.10 117 210 1.5E-29 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CI104_RS12490 e52617b5aabc568b405d57779beedb64 211 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 SUPERFAMILY SSF52096 23 284 1.34E-91 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 249 258 4.7E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 227 238 4.7E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 127 141 4.7E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 161 179 4.7E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 PRINTS PR01070 Acetyl-CoA carboxylase carboxyl transferase beta subunit signature 198 215 4.7E-39 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 Gene3D G3DSA:3.90.226.10 11 287 1.7E-73 T 28-03-2018 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 Hamap MF_01395 Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta, chloroplastic [accD]. 1 279 39.258 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 TIGRFAM TIGR00515 accD: acetyl-CoA carboxylase, carboxyl transferase, beta subunit 1 281 9.7E-152 T 28-03-2018 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS17725 f76348e34b8ec74ab5f2d196b4cae960 304 Pfam PF01039 Carboxyl transferase domain 92 240 2.2E-18 T 28-03-2018 IPR034733 Acetyl-CoA carboxylase KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388|Reactome: R-HSA-196780 CI104_RS04270 d5089145390c14b0fad129503d6a1382 252 Pfam PF01435 Peptidase family M48 72 245 5.1E-26 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CI104_RS04270 d5089145390c14b0fad129503d6a1382 252 Gene3D G3DSA:3.30.2010.10 59 147 9.5E-19 T 28-03-2018 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 PRINTS PR01399 Enterobactin synthetase component D signature 73 91 3.8E-21 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 PRINTS PR01399 Enterobactin synthetase component D signature 146 162 3.8E-21 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 PRINTS PR01399 Enterobactin synthetase component D signature 44 64 3.8E-21 T 28-03-2018 IPR003542 Enterobactin synthetase-like, component D GO:0009239|GO:0009366|GO:0016780 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 Gene3D G3DSA:3.90.470.20 114 194 1.2E-8 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 SUPERFAMILY SSF56214 101 206 1.71E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 Gene3D G3DSA:3.90.470.20 21 113 2.9E-12 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS07270 d9db6fa77eafd78e4e1f2934f06bd942 207 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 104 204 4.9E-11 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS19615 f31dcd3b2ff68ac4edc5be819c3a231b 111 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 5 104 1.8E-14 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Gene3D G3DSA:3.40.50.970 1 204 1.9E-54 T 28-03-2018 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 SUPERFAMILY SSF52518 7 175 6.42E-32 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Pfam PF16582 Middle domain of thiamine pyrophosphate 184 388 2.7E-86 T 28-03-2018 IPR032264 Menaquinone biosynthesis protein MenD, middle domain KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 SUPERFAMILY SSF52518 367 552 3.93E-34 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Gene3D G3DSA:3.40.50.970 358 556 4.9E-32 T 28-03-2018 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 9 169 1.2E-27 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 TIGRFAM TIGR00173 menD: 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase 10 430 1.7E-139 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 PIRSF PIRSF004983 1 556 6.5E-184 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 417 534 3.5E-8 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Gene3D G3DSA:3.40.50.1220 217 357 5.5E-17 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS17460 4193718a8b1e2dee7e9fa8ce6843a935 556 Hamap MF_01659 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [menD]. 4 553 32.707 T 28-03-2018 IPR004433 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase GO:0009234|GO:0030976|GO:0070204 KEGG: 00130+2.2.1.9|MetaCyc: PWY-5837 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 TIGRFAM TIGR03030 CelA: cellulose synthase catalytic subunit (UDP-forming) 147 829 0.0 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 Pfam PF00535 Glycosyl transferase family 2 276 446 2.0E-34 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 593 612 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 199 219 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 667 688 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 524 550 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 227 252 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 363 387 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 282 301 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 PRINTS PR01439 Cellulose synthase subunit A signature 553 572 2.8E-56 T 28-03-2018 IPR003919 Cellulose synthase, subunit A GO:0006011|GO:0016020|GO:0016759|GO:0035438 KEGG: 00500+2.4.1.12|MetaCyc: PWY-1001 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 SUPERFAMILY SSF141371 695 777 1.96E-8 T 28-03-2018 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 Pfam PF07238 PilZ domain 694 790 1.4E-11 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 SUPERFAMILY SSF53448 275 550 9.0E-51 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 Gene3D G3DSA:2.40.10.220 690 798 1.1E-14 T 28-03-2018 CI104_RS01050 4c5548d28c4ad9686e73170c1d7812cc 873 Gene3D G3DSA:3.90.550.10 273 512 2.3E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS12020 d00bd00078affb9770667cebae96966e 546 Gene3D G3DSA:2.30.38.10 351 431 1.9E-23 T 28-03-2018 CI104_RS12020 d00bd00078affb9770667cebae96966e 546 Gene3D G3DSA:3.30.300.30 432 536 1.2E-27 T 28-03-2018 CI104_RS12020 d00bd00078affb9770667cebae96966e 546 Pfam PF00501 AMP-binding enzyme 31 439 3.5E-100 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS12020 d00bd00078affb9770667cebae96966e 546 SUPERFAMILY SSF56801 24 536 8.11E-144 T 28-03-2018 CI104_RS12020 d00bd00078affb9770667cebae96966e 546 Gene3D G3DSA:3.40.50.980 23 197 2.1E-37 T 28-03-2018 CI104_RS12020 d00bd00078affb9770667cebae96966e 546 Gene3D G3DSA:3.40.50.980 198 350 5.5E-40 T 28-03-2018 CI104_RS12020 d00bd00078affb9770667cebae96966e 546 ProSitePatterns PS00455 Putative AMP-binding domain signature. 193 204 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS12020 d00bd00078affb9770667cebae96966e 546 Pfam PF13193 AMP-binding enzyme C-terminal domain 448 525 1.3E-18 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Pfam PF14520 Helix-hairpin-helix domain 72 130 4.3E-17 T 28-03-2018 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 SUPERFAMILY SSF47781 66 137 5.28E-22 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Gene3D G3DSA:1.10.150.20 81 142 1.7E-15 T 28-03-2018 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Gene3D G3DSA:1.10.150.280 57 80 0.029 T 28-03-2018 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 SUPERFAMILY SSF50249 2 63 4.23E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 SMART SM00278 73 92 1.3 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 SMART SM00278 108 127 0.053 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Pfam PF07499 RuvA, C-terminal domain 159 201 2.7E-15 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Gene3D G3DSA:2.40.50.140 2 56 3.4E-23 T 28-03-2018 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Hamap MF_00031 Holliday junction ATP-dependent DNA helicase RuvA [ruvA]. 1 203 32.615 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Pfam PF01330 RuvA N terminal domain 2 62 2.2E-19 T 28-03-2018 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial GO:0005524|GO:0006281|GO:0006310|GO:0009378 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 TIGRFAM TIGR00084 ruvA: Holliday junction DNA helicase RuvA 1 203 1.5E-72 T 28-03-2018 IPR000085 Bacterial DNA recombination protein RuvA GO:0003678|GO:0006281|GO:0006310 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 Gene3D G3DSA:1.10.8.10 157 202 1.7E-15 T 28-03-2018 CI104_RS15365 40087c617baa456ebdd2899970e18fd7 203 SUPERFAMILY SSF46929 157 201 7.59E-11 T 28-03-2018 IPR011114 Holliday junction DNA helicase RuvA, C-terminal GO:0005524|GO:0006281|GO:0006310|GO:0009378|GO:0009379 CI104_RS16085 47314e44b07f3c5df3a4228dd3559ee2 181 PIRSF PIRSF006135 1 181 2.6E-64 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16085 47314e44b07f3c5df3a4228dd3559ee2 181 Pfam PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase 3 180 2.5E-63 T 28-03-2018 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase GO:0000166|GO:0009236|GO:0043752|GO:0051188 KEGG: 00030+2.7.1.15|KEGG: 00860+2.7.7.62+2.7.1.156|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16085 47314e44b07f3c5df3a4228dd3559ee2 181 Gene3D G3DSA:3.40.50.300 2 181 5.5E-64 T 28-03-2018 CI104_RS16085 47314e44b07f3c5df3a4228dd3559ee2 181 SUPERFAMILY SSF52540 2 181 1.57E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21710 0c7b402877a8d1d529236bd7bf1d0e53 291 Gene3D G3DSA:3.20.20.70 1 291 3.2E-65 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS21710 0c7b402877a8d1d529236bd7bf1d0e53 291 Hamap MF_02052 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase [lsrF]. 1 291 75.112 T 28-03-2018 IPR033673 3-hydroxy-5-phosphonooxypentane-2,4-dione thiolase GO:0016747 KEGG: 00600+2.3.1.24 CI104_RS21710 0c7b402877a8d1d529236bd7bf1d0e53 291 Pfam PF01791 DeoC/LacD family aldolase 52 258 9.9E-18 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS21710 0c7b402877a8d1d529236bd7bf1d0e53 291 SUPERFAMILY SSF51569 35 274 1.14E-64 T 28-03-2018 CI104_RS21710 0c7b402877a8d1d529236bd7bf1d0e53 291 PIRSF PIRSF038992 31 289 4.8E-83 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS21710 0c7b402877a8d1d529236bd7bf1d0e53 291 SMART SM01133 51 259 6.3E-29 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 215 241 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 90 110 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 18 46 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 64 87 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 157 180 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 128 154 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 PRINTS PR00169 Potassium channel signature 186 208 1.9E-33 T 28-03-2018 IPR028325 Voltage-gated potassium channel GO:0005249|GO:0006813|GO:0008076 Reactome: R-HSA-1296072 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 Gene3D G3DSA:1.20.120.350 24 156 1.1E-21 T 28-03-2018 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 SUPERFAMILY SSF81324 29 242 8.37E-47 T 28-03-2018 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 Gene3D G3DSA:1.20.5.110 207 242 4.9E-14 T 28-03-2018 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 Gene3D G3DSA:1.10.287.70 157 205 3.9E-11 T 28-03-2018 CI104_RS14255 d6b8077c49106fe9e53a08877986f11a 278 Pfam PF00520 Ion transport protein 29 243 9.7E-27 T 28-03-2018 IPR005821 Ion transport domain GO:0005216|GO:0006811|GO:0016020|GO:0055085 CI104_RS11795 2f7e2c165ca81957db909b09f4f609f8 447 TIGRFAM TIGR03241 arg_catab_astB: succinylarginine dihydrolase 4 440 2.9E-236 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CI104_RS11795 2f7e2c165ca81957db909b09f4f609f8 447 Hamap MF_01172 N-succinylarginine dihydrolase [astB]. 1 441 58.247 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CI104_RS11795 2f7e2c165ca81957db909b09f4f609f8 447 SUPERFAMILY SSF55909 3 441 1.51E-203 T 28-03-2018 CI104_RS11795 2f7e2c165ca81957db909b09f4f609f8 447 Pfam PF04996 Succinylarginine dihydrolase 3 440 1.9E-211 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CI104_RS11795 2f7e2c165ca81957db909b09f4f609f8 447 Gene3D G3DSA:3.75.10.20 2 441 6.0E-218 T 28-03-2018 IPR007079 Succinylarginine dihydrolase GO:0006525|GO:0009015 KEGG: 00330+3.5.3.23 CI104_RS25555 6d51cc5f6409d6591142f1d9a1b382ea 391 SUPERFAMILY SSF47823 32 108 1.18E-6 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CI104_RS25555 6d51cc5f6409d6591142f1d9a1b382ea 391 Pfam PF00589 Phage integrase family 160 373 3.3E-13 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25555 6d51cc5f6409d6591142f1d9a1b382ea 391 Gene3D G3DSA:1.10.443.10 142 377 1.1E-20 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25555 6d51cc5f6409d6591142f1d9a1b382ea 391 Gene3D G3DSA:1.10.150.130 26 141 1.2E-7 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS25555 6d51cc5f6409d6591142f1d9a1b382ea 391 SUPERFAMILY SSF56349 139 287 5.59E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS25555 6d51cc5f6409d6591142f1d9a1b382ea 391 SUPERFAMILY SSF56349 323 385 5.59E-34 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 Gene3D G3DSA:3.30.479.20 149 279 6.0E-48 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 SUPERFAMILY SSF54713 142 281 4.77E-53 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 ProSitePatterns PS01127 Elongation factor Ts signature 2. 75 85 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 SUPERFAMILY SSF46934 4 54 2.24E-18 T 28-03-2018 IPR009060 UBA-like GO:0005515 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 TIGRFAM TIGR00116 tsf: translation elongation factor Ts 1 282 1.6E-120 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 Gene3D G3DSA:3.30.479.20 58 148 6.9E-15 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 Pfam PF00889 Elongation factor TS 71 263 2.6E-65 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 Hamap MF_00050 Elongation factor Ts [tsf]. 1 280 79.375 T 28-03-2018 IPR001816 Translation elongation factor EFTs/EF1B GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 Gene3D G3DSA:1.10.8.10 1 56 1.0E-23 T 28-03-2018 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 ProSitePatterns PS01126 Elongation factor Ts signature 1. 12 27 - T 28-03-2018 IPR018101 Translation elongation factor Ts, conserved site GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS05300 fdd8f1a4e4af76f4b41ec51eea92476b 283 SUPERFAMILY SSF54713 56 139 3.27E-20 T 28-03-2018 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation GO:0003746|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS03150 550c423bf7d9479a56bd29e9cd7121e3 329 SUPERFAMILY SSF53686 11 320 1.17E-93 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS03150 550c423bf7d9479a56bd29e9cd7121e3 329 Gene3D G3DSA:3.40.50.1100 113 329 5.2E-53 T 28-03-2018 CI104_RS03150 550c423bf7d9479a56bd29e9cd7121e3 329 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 49 62 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CI104_RS03150 550c423bf7d9479a56bd29e9cd7121e3 329 Gene3D G3DSA:3.40.50.1100 57 112 8.8E-21 T 28-03-2018 CI104_RS03150 550c423bf7d9479a56bd29e9cd7121e3 329 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 24 312 2.6E-79 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS03150 550c423bf7d9479a56bd29e9cd7121e3 329 TIGRFAM TIGR01127 ilvA_1Cterm: threonine ammonia-lyase 28 323 7.1E-115 T 28-03-2018 IPR005789 Threonine dehydratase, catabolic GO:0004794|GO:0006567 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Pfam PF08494 DEAD/H associated 680 868 4.7E-70 T 28-03-2018 IPR013701 DEAD/H associated GO:0005524|GO:0016818 CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 SUPERFAMILY SSF52540 42 222 1.32E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 SUPERFAMILY SSF52540 269 316 1.32E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 SUPERFAMILY SSF52540 350 423 1.32E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Pfam PF00270 DEAD/DEAH box helicase 31 220 1.0E-24 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Gene3D G3DSA:1.10.10.10 1196 1432 5.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Gene3D G3DSA:1.10.10.10 1021 1095 0.059 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Pfam PF00271 Helicase conserved C-terminal domain 347 418 2.9E-11 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Gene3D G3DSA:1.10.10.10 855 981 0.066 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Gene3D G3DSA:3.40.50.300 272 440 7.7E-23 T 28-03-2018 CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 Gene3D G3DSA:3.40.50.300 3 231 1.8E-33 T 28-03-2018 CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 SMART SM00382 42 406 0.0027 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 SMART SM00487 25 251 1.7E-34 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS12390 9beb1b038777e58ba1620630bb742ad7 1559 SMART SM00490 308 423 2.4E-13 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS09805 560043b34a8f2abdd9d0658ba02844dc 659 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 162 172 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS09805 560043b34a8f2abdd9d0658ba02844dc 659 SUPERFAMILY SSF143975 6 424 6.28E-90 T 28-03-2018 CI104_RS09805 560043b34a8f2abdd9d0658ba02844dc 659 SUPERFAMILY SSF52016 440 642 3.22E-39 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS09805 560043b34a8f2abdd9d0658ba02844dc 659 TIGRFAM TIGR03432 yjhG_yagF: putative dehydratase, YjhG/YagF family 7 648 0.0 T 28-03-2018 IPR017798 Dehydratase YjhG/YagF CI104_RS09805 560043b34a8f2abdd9d0658ba02844dc 659 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 529 540 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS09805 560043b34a8f2abdd9d0658ba02844dc 659 Pfam PF00920 Dehydratase family 85 599 3.6E-115 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS16230 ed8f206f0f452c0b039d761df25daa94 210 Gene3D G3DSA:2.40.40.20 135 187 0.12 T 28-03-2018 CI104_RS16230 ed8f206f0f452c0b039d761df25daa94 210 PIRSF PIRSF010130 1 210 2.4E-87 T 28-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CI104_RS16230 ed8f206f0f452c0b039d761df25daa94 210 Pfam PF06130 Phosphate propanoyltransferase 23 101 2.6E-26 T 28-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CI104_RS16230 ed8f206f0f452c0b039d761df25daa94 210 Pfam PF06130 Phosphate propanoyltransferase 131 196 5.1E-18 T 28-03-2018 IPR008300 Phosphate propanoyltransferase GO:0016747 KEGG: 00561+2.3.1.22|KEGG: 00640+2.3.1.222|MetaCyc: PWY-5437|MetaCyc: PWY-7013|MetaCyc: PWY-7420 CI104_RS16230 ed8f206f0f452c0b039d761df25daa94 210 Gene3D G3DSA:2.40.40.20 71 134 0.2 T 28-03-2018 CI104_RS20295 6f645f7b2f93ebd86a2eb9283e1169b6 417 SMART SM00646 250 404 3.3E-68 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CI104_RS20295 6f645f7b2f93ebd86a2eb9283e1169b6 417 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 190 404 1.2E-50 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CI104_RS20295 6f645f7b2f93ebd86a2eb9283e1169b6 417 Gene3D G3DSA:3.40.630.40 187 409 8.0E-58 T 28-03-2018 CI104_RS20295 6f645f7b2f93ebd86a2eb9283e1169b6 417 Pfam PF11741 AMIN domain 39 142 1.3E-27 T 28-03-2018 IPR021731 AMIN domain CI104_RS20295 6f645f7b2f93ebd86a2eb9283e1169b6 417 SUPERFAMILY SSF53187 188 284 4.71E-53 T 28-03-2018 CI104_RS20295 6f645f7b2f93ebd86a2eb9283e1169b6 417 SUPERFAMILY SSF53187 331 407 4.71E-53 T 28-03-2018 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 12 180 1.3E-52 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 Gene3D G3DSA:3.20.20.80 274 593 7.4E-60 T 28-03-2018 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 Gene3D G3DSA:2.60.40.10 181 273 2.5E-12 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 324 349 - T 28-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 314 332 2.2E-18 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 283 297 2.2E-18 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 91 106 2.2E-18 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 399 414 2.2E-18 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 PRINTS PR00132 Glycosyl hydrolase family 2 signature 498 513 2.2E-18 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 SUPERFAMILY SSF49785 1 180 2.27E-54 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 SUPERFAMILY SSF49303 183 273 9.78E-16 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 274 592 2.3E-105 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 Gene3D G3DSA:2.60.120.260 1 180 2.6E-41 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 399 413 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 Pfam PF00703 Glycosyl hydrolases family 2 186 272 9.7E-6 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CI104_RS27285 e41045b6f1082720b07fe29dc8196cc6 603 SUPERFAMILY SSF51445 274 590 6.53E-83 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS00600 a78b26edca42fb3e8ad331b0b3c066dd 320 SUPERFAMILY SSF53756 1 320 7.69E-71 T 28-03-2018 CI104_RS00600 a78b26edca42fb3e8ad331b0b3c066dd 320 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 76 303 1.4E-77 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CI104_RS00600 a78b26edca42fb3e8ad331b0b3c066dd 320 Gene3D G3DSA:3.40.50.2000 1 163 1.2E-38 T 28-03-2018 CI104_RS00600 a78b26edca42fb3e8ad331b0b3c066dd 320 Gene3D G3DSA:3.40.50.2000 164 320 1.2E-32 T 28-03-2018 CI104_RS00600 a78b26edca42fb3e8ad331b0b3c066dd 320 TIGRFAM TIGR02193 heptsyl_trn_I: lipopolysaccharide heptosyltransferase I 2 319 1.3E-129 T 28-03-2018 IPR011908 Lipopolysaccharide heptosyltransferase I GO:0008920|GO:0009244 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 Pfam PF00196 Bacterial regulatory proteins, luxR family 115 168 7.4E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 SUPERFAMILY SSF46894 107 170 2.11E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 SMART SM00421 113 170 7.5E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 146 5.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 146 158 5.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 116 130 5.0E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11455 babd02015b46fb88fa482aeda5393958 186 Gene3D G3DSA:1.10.10.10 4 176 1.0E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF47789 251 325 1.27E-25 T 28-03-2018 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01000 RNA polymerase Rpb3/RpoA insert domain 60 156 1.7E-23 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 119 231 2.8E-28 T 28-03-2018 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:3.30.1360.10 4 90 3.1E-19 T 28-03-2018 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 ProDom PD001179 RNA POLYMERASE ALPHA DNA-DIRECTED SUBUNIT CHAIN NUCLEOTIDYLTRANSFERASE TRANSFERASE TRANSCRIPTION TRANSCRIPTASE 256 329 2.0E-36 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF03118 Bacterial RNA polymerase, alpha chain C terminal domain 245 308 7.5E-24 T 28-03-2018 IPR011260 RNA polymerase, alpha subunit, C-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 179 231 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF55257 6 53 1.57E-30 T 28-03-2018 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 SMART SM00662 23 234 3.0E-105 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Hamap MF_00059 DNA-directed RNA polymerase subunit alpha [rpoA]. 5 317 34.651 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 SUPERFAMILY SSF56553 53 178 1.45E-41 T 28-03-2018 IPR011262 DNA-directed RNA polymerase, insert domain GO:0003899|GO:0006351|GO:0046983 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Gene3D G3DSA:1.10.150.20 245 328 7.6E-29 T 28-03-2018 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 Pfam PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain 29 228 3.9E-24 T 28-03-2018 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS02170 456bfd9236c5cfd90803aed14a8ec2d0 329 TIGRFAM TIGR02027 rpoA: DNA-directed RNA polymerase, alpha subunit 24 316 4.3E-113 T 28-03-2018 IPR011773 DNA-directed RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS20585 188945fba6577dd20d3f66c1537cbdb2 282 SMART SM00862 25 103 7.6E-5 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20585 188945fba6577dd20d3f66c1537cbdb2 282 SUPERFAMILY SSF46894 24 103 1.19E-7 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS20585 188945fba6577dd20d3f66c1537cbdb2 282 Gene3D G3DSA:1.10.10.10 4 109 9.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20585 188945fba6577dd20d3f66c1537cbdb2 282 Pfam PF00486 Transcriptional regulatory protein, C terminal 28 102 3.7E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 SUPERFAMILY SSF81273 2 58 1.61E-16 T 28-03-2018 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 SUPERFAMILY SSF81273 92 134 2.86E-11 T 28-03-2018 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 Pfam PF00816 H-NS histone family 37 128 3.2E-20 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 Gene3D G3DSA:4.10.430.10 93 134 2.2E-19 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 Gene3D G3DSA:1.10.287.1050 1 57 2.8E-23 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 PIRSF PIRSF002096 1 134 8.4E-54 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CI104_RS26550 0096e427ab4c4b54f3139bd0ae4f4660 134 SMART SM00528 87 134 9.2E-25 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 PIRSF PIRSF031134 5 419 1.2E-142 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 Gene3D G3DSA:3.30.200.20 1 118 3.7E-27 T 28-03-2018 CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 Pfam PF01636 Phosphotransferase enzyme family 40 273 9.5E-18 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 TIGRFAM TIGR01767 MTRK: S-methyl-5-thioribose kinase 42 416 5.1E-124 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 Gene3D G3DSA:3.90.1200.10 119 374 3.6E-16 T 28-03-2018 CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 SUPERFAMILY SSF56112 7 416 1.4E-83 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS04090 6b1aeec59d9d16250468cf786ab37b9a 419 Hamap MF_01683 Methylthioribose kinase [mtnK]. 1 419 180.694 T 28-03-2018 IPR009212 Methylthioribose kinase GO:0009086|GO:0046522 KEGG: 00270+2.7.1.100|KEGG: 00500+2.7.1.10|MetaCyc: PWY-6754 CI104_RS07010 3177f7c67524f4780ec2b889e0ddcf92 308 Gene3D G3DSA:1.10.287.460 98 194 1.2E-8 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CI104_RS07010 3177f7c67524f4780ec2b889e0ddcf92 308 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 214 299 9.0E-11 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CI104_RS07010 3177f7c67524f4780ec2b889e0ddcf92 308 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 91 206 3.1E-12 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CI104_RS07010 3177f7c67524f4780ec2b889e0ddcf92 308 Gene3D G3DSA:1.10.287.620 1 97 2.7E-6 T 28-03-2018 CI104_RS07010 3177f7c67524f4780ec2b889e0ddcf92 308 Gene3D G3DSA:3.10.50.40 195 308 2.0E-21 T 28-03-2018 CI104_RS07010 3177f7c67524f4780ec2b889e0ddcf92 308 SUPERFAMILY SSF54534 107 302 1.06E-25 T 28-03-2018 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 Gene3D G3DSA:3.90.1820.10 1 456 1.4E-98 T 28-03-2018 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 192 436 5.5E-39 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 SUPERFAMILY SSF56327 166 451 3.21E-48 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 188 200 4.2E-20 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 2 17 4.2E-20 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 162 173 4.2E-20 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 92 105 4.2E-20 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 136 153 4.2E-20 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 PRINTS PR00732 Glycosyl hydrolase family 4 signature 71 87 4.2E-20 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 Pfam PF02056 Family 4 glycosyl hydrolase 2 177 1.9E-29 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00420 dbf096bcb44c3c0d2fef72a184245373 459 SUPERFAMILY SSF51735 2 167 4.09E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS22810 1075d817d1ab7713adbd196a27855ab4 242 SUPERFAMILY SSF46894 19 101 5.67E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS22810 1075d817d1ab7713adbd196a27855ab4 242 SMART SM00862 24 101 6.1E-11 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS22810 1075d817d1ab7713adbd196a27855ab4 242 Pfam PF00486 Transcriptional regulatory protein, C terminal 25 100 6.5E-13 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS22810 1075d817d1ab7713adbd196a27855ab4 242 Gene3D G3DSA:1.10.10.10 5 108 8.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 5.4E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 5.4E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 5.4E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 190 1.9E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 Gene3D G3DSA:1.10.10.10 123 195 2.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 SUPERFAMILY SSF46894 127 193 5.78E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 Gene3D G3DSA:3.40.50.2300 1 122 9.4E-27 T 28-03-2018 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 SMART SM00421 135 192 4.5E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 SMART SM00448 2 112 5.0E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS00195 a2030e6a2d5d819fc1db5a952da31ad9 196 SUPERFAMILY SSF52172 1 125 1.38E-26 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS21895 868064cc187f26244eb3c8aa079670f6 176 SUPERFAMILY SSF56024 65 166 4.76E-8 T 28-03-2018 CI104_RS21895 868064cc187f26244eb3c8aa079670f6 176 Pfam PF13091 PLD-like domain 71 165 4.3E-7 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS21895 868064cc187f26244eb3c8aa079670f6 176 Gene3D G3DSA:3.30.870.10 34 172 2.3E-5 T 28-03-2018 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 SUPERFAMILY SSF54197 3 177 1.59E-71 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 Pfam PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain 183 345 1.0E-72 T 28-03-2018 IPR005850 Galactose-1-phosphate uridyl transferase, C-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 Pfam PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain 3 176 5.5E-69 T 28-03-2018 IPR005849 Galactose-1-phosphate uridyl transferase, N-terminal GO:0006012|GO:0008108 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 ProSitePatterns PS00117 Galactose-1-phosphate uridyl transferase family 1 active site signature. 151 168 - T 28-03-2018 IPR019779 Galactose-1-phosphate uridyl transferase, class I His-active site KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 SUPERFAMILY SSF54197 179 345 7.11E-60 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 Gene3D G3DSA:3.30.428.10 45 164 1.1E-50 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 Gene3D G3DSA:3.30.428.10 165 345 1.1E-59 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 TIGRFAM TIGR00209 galT_1: galactose-1-phosphate uridylyltransferase 1 347 2.8E-209 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CI104_RS08180 ddb1ca6a4296cb47872b5ca3af8b5764 348 PIRSF PIRSF000808 1 341 1.1E-126 T 28-03-2018 IPR001937 Galactose-1-phosphate uridyl transferase, class I GO:0008108|GO:0008270|GO:0033499 KEGG: 00052+2.7.7.12|KEGG: 00520+2.7.7.12|MetaCyc: PWY-6317|MetaCyc: PWY-6527|Reactome: R-HSA-70370 CI104_RS10630 ed79c95eeabfa66885eb49a81806fe88 129 Gene3D G3DSA:1.10.10.60 62 116 1.2E-17 T 28-03-2018 CI104_RS10630 ed79c95eeabfa66885eb49a81806fe88 129 SUPERFAMILY SSF46689 12 107 9.86E-26 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS10630 ed79c95eeabfa66885eb49a81806fe88 129 Pfam PF08765 Mor transcription activator family 9 116 9.1E-43 T 28-03-2018 IPR014875 Mor transcription activator CI104_RS05850 a59f49531dcab89c22a7320277a4d5a2 135 Pfam PF07883 Cupin domain 43 103 1.0E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS05850 a59f49531dcab89c22a7320277a4d5a2 135 SUPERFAMILY SSF51182 13 133 5.63E-30 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS05850 a59f49531dcab89c22a7320277a4d5a2 135 Gene3D G3DSA:2.60.120.10 14 135 3.4E-31 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS15570 bbe02168f6363ecd5688cdcc9978ed89 473 Gene3D G3DSA:3.40.50.2000 236 436 2.9E-40 T 28-03-2018 CI104_RS15570 bbe02168f6363ecd5688cdcc9978ed89 473 SUPERFAMILY SSF53756 2 453 9.42E-145 T 28-03-2018 CI104_RS15570 bbe02168f6363ecd5688cdcc9978ed89 473 TIGRFAM TIGR02400 trehalose_OtsA: alpha,alpha-trehalose-phosphate synthase (UDP-forming) 3 451 5.2E-180 T 28-03-2018 IPR012766 Alpha,alpha-trehalose-phosphate synthase GO:0003825|GO:0005992 KEGG: 00500+2.4.1.15 CI104_RS15570 bbe02168f6363ecd5688cdcc9978ed89 473 Pfam PF00982 Glycosyltransferase family 20 16 451 2.2E-145 T 28-03-2018 IPR001830 Glycosyl transferase, family 20 GO:0003824|GO:0005992 CI104_RS15570 bbe02168f6363ecd5688cdcc9978ed89 473 Gene3D G3DSA:3.40.50.2000 1 235 9.5E-68 T 28-03-2018 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 SUPERFAMILY SSF47384 194 271 1.41E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 Pfam PF00512 His Kinase A (phospho-acceptor) domain 211 270 3.6E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 Gene3D G3DSA:3.30.565.10 277 427 3.5E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 SMART SM00304 158 210 7.0E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 SMART SM00388 211 271 2.3E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 9.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 9.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 9.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 Gene3D G3DSA:1.10.287.130 201 267 3.4E-9 T 28-03-2018 CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 320 422 1.9E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 SMART SM00387 315 425 4.0E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12590 bfd9715d1201c6b23d29a8b5761ff482 433 SUPERFAMILY SSF55874 261 423 6.42E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 Pfam PF02378 Phosphotransferase system, EIIC 13 320 8.2E-84 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 52 331 1.1E-89 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 SUPERFAMILY SSF55604 401 474 1.15E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 378 460 4.5E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 Gene3D G3DSA:3.30.1360.60 399 474 1.1E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 Pfam PF00367 phosphotransferase system, EIIB 405 436 1.5E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 414 431 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS10575 bf3ded44ce4732bb92b1582a32be3a74 477 TIGRFAM TIGR02002 PTS-II-BC-glcB: PTS system, glucose-specific IIBC component 2 475 8.5E-234 T 28-03-2018 IPR011299 PTS system glucose-specific IIBC component GO:0005355|GO:0015758|GO:0016021 CI104_RS11425 59a6d7ca073c9781035088c3656a6fb9 81 Gene3D G3DSA:3.20.20.70 1 70 2.7E-7 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 SMART SM00420 6 58 3.7E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 5.3E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 5.3E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 SUPERFAMILY SSF46785 5 64 2.04E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.3E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 SMART SM01134 90 250 1.5E-61 T 28-03-2018 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 Gene3D G3DSA:3.40.50.1360 82 258 7.4E-34 T 28-03-2018 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 Pfam PF00455 DeoR C terminal sensor domain 92 248 2.2E-49 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 SUPERFAMILY SSF100950 92 250 2.2E-29 T 28-03-2018 CI104_RS23945 7ef202421f86883696ea02fa9f852622 269 Gene3D G3DSA:1.10.10.10 1 79 5.8E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15275 1f70386d46709e4dc005fcbbc83c512c 218 Gene3D G3DSA:3.60.110.10 1 107 4.9E-12 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS15275 1f70386d46709e4dc005fcbbc83c512c 218 SUPERFAMILY SSF56317 4 196 3.27E-15 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS15275 1f70386d46709e4dc005fcbbc83c512c 218 Pfam PF00795 Carbon-nitrogen hydrolase 5 101 1.9E-10 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS17560 81da2b3778d181e33c5e697edd1c06bd 405 Pfam PF00155 Aminotransferase class I and II 58 385 3.9E-46 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS17560 81da2b3778d181e33c5e697edd1c06bd 405 Gene3D G3DSA:3.40.640.10 53 280 8.4E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS17560 81da2b3778d181e33c5e697edd1c06bd 405 Gene3D G3DSA:3.90.1150.10 281 405 2.6E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS17560 81da2b3778d181e33c5e697edd1c06bd 405 SUPERFAMILY SSF53383 7 401 7.15E-94 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS17455 f80eefe0a4153e59b25b104fce963796 252 Hamap MF_01660 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase [menH]. 10 251 33.749 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CI104_RS17455 f80eefe0a4153e59b25b104fce963796 252 Gene3D G3DSA:3.40.50.1820 1 252 2.8E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS17455 f80eefe0a4153e59b25b104fce963796 252 SUPERFAMILY SSF53474 10 250 8.79E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS17455 f80eefe0a4153e59b25b104fce963796 252 Pfam PF12697 Alpha/beta hydrolase family 17 244 1.5E-15 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS17455 f80eefe0a4153e59b25b104fce963796 252 TIGRFAM TIGR03695 menH_SHCHC: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase 14 250 3.9E-79 T 28-03-2018 IPR022485 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase GO:0009234|GO:0070205 KEGG: 00130+4.2.99.20|MetaCyc: PWY-5837 CI104_RS23940 7055c9539f7e1326d4812b6b20b0e9fd 334 Gene3D G3DSA:3.40.50.2300 149 329 5.1E-12 T 28-03-2018 CI104_RS23940 7055c9539f7e1326d4812b6b20b0e9fd 334 Gene3D G3DSA:3.40.50.2300 32 148 4.2E-20 T 28-03-2018 CI104_RS23940 7055c9539f7e1326d4812b6b20b0e9fd 334 Pfam PF13407 Periplasmic binding protein domain 37 292 4.8E-53 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS23940 7055c9539f7e1326d4812b6b20b0e9fd 334 SUPERFAMILY SSF53822 33 303 4.48E-64 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS21200 b766791cb95bc8ef040a41d4eaf9c402 357 SUPERFAMILY SSF52151 21 279 8.63E-43 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CI104_RS21200 b766791cb95bc8ef040a41d4eaf9c402 357 Gene3D G3DSA:3.40.1090.10 16 242 1.6E-28 T 28-03-2018 CI104_RS21200 b766791cb95bc8ef040a41d4eaf9c402 357 Pfam PF01734 Patatin-like phospholipase 27 195 9.4E-21 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 SUPERFAMILY SSF54814 182 297 7.85E-41 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 Gene3D G3DSA:3.30.300.20 186 300 7.0E-43 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 Gene3D G3DSA:3.40.50.300 26 180 3.2E-27 T 28-03-2018 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 Hamap MF_00367 GTPase Era [era]. 6 297 35.37 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 Pfam PF01926 50S ribosome-binding GTPase 11 125 2.0E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 TIGRFAM TIGR00436 era: GTP-binding protein Era 9 280 2.1E-119 T 28-03-2018 IPR005662 GTP-binding protein Era GO:0003723|GO:0005525|GO:0005622 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 Pfam PF07650 KH domain 209 285 1.3E-19 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 Gene3D G3DSA:3.40.50.300 8 25 0.0076 T 28-03-2018 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 7 171 1.1E-42 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS18810 a7148af4dd1107e053c0a97b739cbe6a 301 SUPERFAMILY SSF52540 11 205 4.02E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06355 45039dbd107aaeb8be52a211f7e75c62 454 Pfam PF07690 Major Facilitator Superfamily 20 266 1.2E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS06355 45039dbd107aaeb8be52a211f7e75c62 454 Pfam PF07690 Major Facilitator Superfamily 278 393 1.8E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS06355 45039dbd107aaeb8be52a211f7e75c62 454 Gene3D G3DSA:1.20.1250.20 9 198 4.1E-33 T 28-03-2018 CI104_RS06355 45039dbd107aaeb8be52a211f7e75c62 454 Gene3D G3DSA:1.20.1250.20 203 395 1.5E-16 T 28-03-2018 CI104_RS06355 45039dbd107aaeb8be52a211f7e75c62 454 SUPERFAMILY SSF103473 12 391 9.81E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 Gene3D G3DSA:2.140.10.10 28 194 1.4E-31 T 28-03-2018 CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 155 186 5.5E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 251 282 3.1E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 289 320 250.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 329 361 6.5E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 64 96 7.6E-5 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 114 146 3.0E-4 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SMART SM00564 200 231 110.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 Hamap MF_00923 Outer membrane protein assembly factor BamB [bamB]. 2 392 40.93 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 TIGRFAM TIGR03300 assembly_YfgL: outer membrane assembly lipoprotein YfgL 8 390 9.8E-134 T 28-03-2018 IPR017687 Outer membrane protein assembly factor BamB CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 Gene3D G3DSA:2.140.10.10 233 365 1.6E-21 T 28-03-2018 CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 SUPERFAMILY SSF50998 34 384 1.28E-78 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CI104_RS18530 b11a5fc2072bb8a3e3a25558d18dd03a 392 Pfam PF13360 PQQ-like domain 78 319 3.4E-53 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CI104_RS01350 2c0f46e149ef8480b1d5e80871f0123c 349 Pfam PF01594 AI-2E family transporter 14 328 3.5E-77 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CI104_RS08775 8fdc18f81d5e8ffb72fb5bc6b99eacb9 276 SUPERFAMILY SSF47090 198 273 3.06E-20 T 28-03-2018 IPR002477 Peptidoglycan binding-like CI104_RS08775 8fdc18f81d5e8ffb72fb5bc6b99eacb9 276 Gene3D G3DSA:3.40.80.10 42 192 7.7E-42 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS08775 8fdc18f81d5e8ffb72fb5bc6b99eacb9 276 SUPERFAMILY SSF55846 23 194 8.77E-52 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS08775 8fdc18f81d5e8ffb72fb5bc6b99eacb9 276 SMART SM00644 32 178 1.0E-38 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS08775 8fdc18f81d5e8ffb72fb5bc6b99eacb9 276 Gene3D G3DSA:1.10.101.10 193 276 3.0E-8 T 28-03-2018 IPR002477 Peptidoglycan binding-like CI104_RS08775 8fdc18f81d5e8ffb72fb5bc6b99eacb9 276 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 42 179 2.2E-25 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS24585 5873191790f16fd5d3038c05b8783cfb 328 Gene3D G3DSA:3.90.1200.10 110 323 3.8E-19 T 28-03-2018 CI104_RS24585 5873191790f16fd5d3038c05b8783cfb 328 Pfam PF01636 Phosphotransferase enzyme family 32 256 3.6E-40 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CI104_RS24585 5873191790f16fd5d3038c05b8783cfb 328 Gene3D G3DSA:3.30.200.20 5 107 9.3E-18 T 28-03-2018 CI104_RS24585 5873191790f16fd5d3038c05b8783cfb 328 SUPERFAMILY SSF56112 6 327 7.14E-88 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS24585 5873191790f16fd5d3038c05b8783cfb 328 Hamap MF_01497 Stress response kinase A [srkA]. 4 318 45.189 T 28-03-2018 IPR032882 SrkA/RdoA protein kinase GO:0004674|GO:0006468 KEGG: 04150+2.7.11.1|KEGG: 04151+2.7.11.1 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Pfam PF01926 50S ribosome-binding GTPase 205 322 2.0E-24 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Pfam PF01926 50S ribosome-binding GTPase 5 119 1.4E-28 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Gene3D G3DSA:1.20.120.430 2 66 1.6E-15 T 28-03-2018 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 202 368 9.6E-23 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 4 157 3.3E-21 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 SUPERFAMILY SSF52540 137 167 6.2E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 SUPERFAMILY SSF52540 200 464 6.2E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Gene3D G3DSA:3.30.300.20 381 459 3.5E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Pfam PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal 378 458 8.0E-27 T 28-03-2018 IPR032859 GTPase Der, C-terminal KH-domain-like CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 PIRSF PIRSF006485 1 466 1.1E-179 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Gene3D G3DSA:1.20.120.430 269 380 1.1E-17 T 28-03-2018 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Gene3D G3DSA:1.20.120.430 67 268 6.9E-48 T 28-03-2018 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 9.1E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 72 90 9.1E-10 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 SUPERFAMILY SSF52540 4 164 1.7E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 TIGRFAM TIGR03594 GTPase_EngA: ribosome-associated GTPase EngA 3 458 1.3E-179 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CI104_RS18525 9dc86550ff2c8de125ae8b2666c3e574 490 Hamap MF_00195 GTPase Der [der]. 2 461 39.511 T 28-03-2018 IPR016484 GTP-binding protein EngA GO:0005525 CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 SUPERFAMILY SSF51126 3 397 7.55E-81 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 SMART SM00710 207 228 490.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 SMART SM00710 241 261 3300.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 SMART SM00710 181 206 0.21 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 SMART SM00710 267 288 2000.0 T 28-03-2018 IPR006626 Parallel beta-helix repeat CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 Gene3D G3DSA:2.160.20.10 2 433 4.0E-83 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 Pfam PF00295 Glycosyl hydrolases family 28 92 313 2.4E-30 T 28-03-2018 IPR000743 Glycoside hydrolase, family 28 GO:0004650|GO:0005975 CI104_RS05095 e944b1f88ef01340ec3f6a4664395866 434 Pfam PF12708 Pectate lyase superfamily protein 6 51 1.9E-7 T 28-03-2018 IPR024535 Pectate lyase superfamily protein CI104_RS21195 5bbd9b4075e7a68237a5870f73034488 258 Pfam PF01026 TatD related DNase 6 256 1.2E-67 T 28-03-2018 IPR001130 TatD family GO:0016788 CI104_RS21195 5bbd9b4075e7a68237a5870f73034488 258 PIRSF PIRSF005902 1 258 8.1E-73 T 28-03-2018 IPR001130 TatD family GO:0016788 CI104_RS21195 5bbd9b4075e7a68237a5870f73034488 258 ProSitePatterns PS01090 TatD deoxyribonuclease family signature 2. 129 139 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CI104_RS21195 5bbd9b4075e7a68237a5870f73034488 258 Gene3D G3DSA:3.20.20.140 3 258 1.9E-75 T 28-03-2018 CI104_RS21195 5bbd9b4075e7a68237a5870f73034488 258 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 5 13 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CI104_RS21195 5bbd9b4075e7a68237a5870f73034488 258 SUPERFAMILY SSF51556 5 257 9.51E-78 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS10625 590dc8333db713bca11c0be7b4549d87 65 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 48 65 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS10625 590dc8333db713bca11c0be7b4549d87 65 SUPERFAMILY SSF56935 5 65 7.33E-6 T 28-03-2018 CI104_RS10625 590dc8333db713bca11c0be7b4549d87 65 Pfam PF00593 TonB dependent receptor 1 61 3.2E-4 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS10625 590dc8333db713bca11c0be7b4549d87 65 Gene3D G3DSA:2.40.170.20 1 65 1.3E-5 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS16220 9d242cdc179d017d5116f2390e3a1655 91 SMART SM00877 3 79 2.6E-38 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16220 9d242cdc179d017d5116f2390e3a1655 91 Pfam PF00936 BMC domain 4 79 6.1E-30 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16220 9d242cdc179d017d5116f2390e3a1655 91 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CI104_RS16220 9d242cdc179d017d5116f2390e3a1655 91 SUPERFAMILY SSF143414 3 89 3.27E-32 T 28-03-2018 CI104_RS16220 9d242cdc179d017d5116f2390e3a1655 91 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 45 5.0E-16 T 28-03-2018 CI104_RS01690 cc7c53bf3fb81e8a57b95d3fa7dedb53 78 Hamap MF_01586 Probable [Fe-S]-dependent transcriptional repressor [feoC]. 1 78 24.748 T 28-03-2018 IPR023732 Probable [Fe-S]-dependent transcriptional repressor CI104_RS01690 cc7c53bf3fb81e8a57b95d3fa7dedb53 78 SUPERFAMILY SSF46785 1 76 9.78E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01690 cc7c53bf3fb81e8a57b95d3fa7dedb53 78 Gene3D G3DSA:1.10.10.10 1 76 4.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01690 cc7c53bf3fb81e8a57b95d3fa7dedb53 78 Pfam PF09012 FeoC like transcriptional regulator 3 69 3.4E-16 T 28-03-2018 IPR015102 Transcriptional regulator HTH-type, FeoC CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 Gene3D G3DSA:2.60.120.10 7 239 3.9E-28 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 SUPERFAMILY SSF51215 13 166 6.93E-19 T 28-03-2018 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 SUPERFAMILY SSF46689 182 228 1.16E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 Pfam PF02311 AraC-like ligand binding domain 33 110 4.9E-10 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 232 274 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 Gene3D G3DSA:1.10.10.60 240 282 1.2E-12 T 28-03-2018 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 262 278 3.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 247 262 3.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 SMART SM00342 195 278 8.4E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 SUPERFAMILY SSF46689 231 281 6.27E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS03860 d4763c475d4bd690d57a75d73ec3e89f 282 Pfam PF12833 Helix-turn-helix domain 201 280 2.2E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 253 356 7.9E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 SUPERFAMILY SSF55874 195 358 1.83E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 SUPERFAMILY SSF47384 129 202 1.47E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 Gene3D G3DSA:1.10.287.130 131 201 1.0E-7 T 28-03-2018 CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 SMART SM00387 253 360 5.9E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 SMART SM00388 145 205 4.4E-9 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 289 303 8.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 PRINTS PR00344 Bacterial sensor protein C-terminal signature 320 338 8.4E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 Gene3D G3DSA:3.30.565.10 211 360 3.0E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23025 9110d9dd45a568f85813fb4e149cdbf2 360 Pfam PF00512 His Kinase A (phospho-acceptor) domain 147 202 7.0E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS19530 03e670c95fd02a9469bd6966d554d6aa 175 SMART SM00450 6 102 2.4E-16 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS19530 03e670c95fd02a9469bd6966d554d6aa 175 SUPERFAMILY SSF52821 2 154 4.06E-28 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS19530 03e670c95fd02a9469bd6966d554d6aa 175 Gene3D G3DSA:3.40.250.10 2 121 2.5E-23 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS19530 03e670c95fd02a9469bd6966d554d6aa 175 Pfam PF00581 Rhodanese-like domain 7 99 8.6E-13 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS19530 03e670c95fd02a9469bd6966d554d6aa 175 Pfam PF11127 Protein of unknown function (DUF2892) 115 172 3.2E-12 T 28-03-2018 IPR021309 Protein of unknown function DUF2892 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 Pfam PF00364 Biotin-requiring enzyme 82 154 9.1E-25 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 TIGRFAM TIGR00531 BCCP: acetyl-CoA carboxylase, biotin carboxyl carrier protein 1 155 3.9E-69 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 Gene3D G3DSA:2.40.50.100 4 155 2.3E-21 T 28-03-2018 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 116 129 1.9E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 84 97 1.9E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 PRINTS PR01071 Acetyl-CoA biotin carboxyl carrier protein signature 101 115 1.9E-18 T 28-03-2018 IPR001249 Acetyl-CoA biotin carboxyl carrier GO:0003989|GO:0006633|GO:0009317 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 ProSitePatterns PS00188 Biotin-requiring enzymes attachment site. 111 128 - T 28-03-2018 IPR001882 Biotin-binding site Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CI104_RS02425 5960c28a6a9c9466c928e405853f16ea 155 SUPERFAMILY SSF51230 80 155 5.63E-26 T 28-03-2018 IPR011053 Single hybrid motif CI104_RS12820 ff6cba8747e58679c3767e2a70cb212a 367 Gene3D G3DSA:3.20.20.210 2 367 1.4E-101 T 28-03-2018 CI104_RS12820 ff6cba8747e58679c3767e2a70cb212a 367 SUPERFAMILY SSF51726 11 367 1.07E-82 T 28-03-2018 CI104_RS12820 ff6cba8747e58679c3767e2a70cb212a 367 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 12 348 1.9E-13 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS17925 62e2371eae2c542b4ae7a09217f321c3 152 SUPERFAMILY SSF53927 2 134 7.53E-36 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS17925 62e2371eae2c542b4ae7a09217f321c3 152 Gene3D G3DSA:3.40.140.10 1 152 1.3E-33 T 28-03-2018 CI104_RS17925 62e2371eae2c542b4ae7a09217f321c3 152 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 53 90 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CI104_RS17925 62e2371eae2c542b4ae7a09217f321c3 152 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 1 101 2.3E-19 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CI104_RS19950 956f604085b552a681a92b6efa282697 236 Hamap MF_00108 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase [ispD]. 7 227 44.794 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CI104_RS19950 956f604085b552a681a92b6efa282697 236 ProSitePatterns PS01295 4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature. 102 109 - T 28-03-2018 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site GO:0003824|GO:0008299 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CI104_RS19950 956f604085b552a681a92b6efa282697 236 Pfam PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 8 229 2.7E-93 T 28-03-2018 IPR034683 Cytidylyltransferase IspD/TarI GO:0070567 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CI104_RS19950 956f604085b552a681a92b6efa282697 236 Gene3D G3DSA:3.90.550.10 2 236 4.1E-54 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS19950 956f604085b552a681a92b6efa282697 236 TIGRFAM TIGR00453 ispD: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 9 227 2.3E-79 T 28-03-2018 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase GO:0008299|GO:0050518 KEGG: 00900+2.7.7.60|MetaCyc: PWY-7560 CI104_RS19950 956f604085b552a681a92b6efa282697 236 SUPERFAMILY SSF53448 8 227 3.76E-61 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 SUPERFAMILY SSF54752 272 327 5.49E-21 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 Pfam PF00154 recA bacterial DNA recombination protein 9 270 6.6E-142 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 ProSitePatterns PS00321 recA signature. 215 223 - T 28-03-2018 IPR020584 DNA recombination/repair protein RecA, conserved site GO:0003677|GO:0005524|GO:0006259|GO:0008094 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 Gene3D G3DSA:3.30.250.10 272 328 6.1E-26 T 28-03-2018 IPR023400 DNA recombination and repair protein RecA, C-terminal CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 Hamap MF_00268 Protein RecA [recA]. 7 331 50.984 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 Gene3D G3DSA:3.40.50.300 28 270 8.5E-47 T 28-03-2018 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 TIGRFAM TIGR02012 tigrfam_recA: protein RecA 6 326 6.8E-173 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 SMART SM00382 59 230 4.5E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 PRINTS PR00142 RecA protein signature 129 158 1.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 PRINTS PR00142 RecA protein signature 167 196 1.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 PRINTS PR00142 RecA protein signature 212 240 1.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 PRINTS PR00142 RecA protein signature 299 316 1.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 PRINTS PR00142 RecA protein signature 245 274 1.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 PRINTS PR00142 RecA protein signature 95 124 1.9E-83 T 28-03-2018 IPR013765 DNA recombination and repair protein RecA GO:0003697|GO:0005524|GO:0006281 CI104_RS19700 384776e45cf14d15382bdbe86abccf6d 353 SUPERFAMILY SSF52540 6 269 3.85E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01100 d69d7dbe1a1181165286d8229004ee04 686 Pfam PF05170 AsmA family 1 582 1.6E-175 T 28-03-2018 IPR007844 AsmA CI104_RS14350 a0ca1ec006e270ecbf4e59479f5ce113 236 Pfam PF02613 Nitrate reductase delta subunit 42 155 3.0E-12 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS14350 a0ca1ec006e270ecbf4e59479f5ce113 236 SUPERFAMILY SSF89155 5 163 4.71E-32 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS14350 a0ca1ec006e270ecbf4e59479f5ce113 236 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 8 161 2.6E-54 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CI104_RS14350 a0ca1ec006e270ecbf4e59479f5ce113 236 Gene3D G3DSA:1.10.3480.10 4 203 5.3E-31 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 Pfam PF08918 PhoQ Sensor 10 188 5.0E-85 T 28-03-2018 IPR015014 PhoQ Sensor GO:0000160|GO:0004673|GO:0005524|GO:0016020|GO:0018106|GO:0046872 CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 377 470 1.6E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 Gene3D G3DSA:3.30.565.10 336 487 1.3E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 SUPERFAMILY SSF47384 250 319 5.89E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 441 459 5.3E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 424 5.3E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 SMART SM00387 375 481 2.4E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS10975 cb85fd2cd6659e0129a535eef7d5a8cd 487 SUPERFAMILY SSF55874 337 477 2.23E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03715 d34f043d1910c1fa985bb8c90329cf92 246 Pfam PF01774 UreD urease accessory protein 26 216 1.7E-46 T 28-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CI104_RS03715 d34f043d1910c1fa985bb8c90329cf92 246 Hamap MF_01384 Urease accessory protein UreD [ureD]. 1 230 25.634 T 28-03-2018 IPR002669 Urease accessory protein UreD GO:0006807|GO:0016151 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 Hamap MF_00008 Thymidylate synthase [thyA]. 1 264 40.442 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 Gene3D G3DSA:3.30.572.10 1 264 1.8E-134 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 PRINTS PR00108 Thymidylate synthase family signature 197 214 1.5E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 PRINTS PR00108 Thymidylate synthase family signature 159 185 1.5E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 PRINTS PR00108 Thymidylate synthase family signature 141 156 1.5E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 PRINTS PR00108 Thymidylate synthase family signature 42 63 1.5E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 PRINTS PR00108 Thymidylate synthase family signature 115 134 1.5E-47 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 SUPERFAMILY SSF55831 1 264 1.83E-131 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 84 264 4.5E-94 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 TIGRFAM TIGR03284 thym_sym: thymidylate synthase 2 85 2.9E-42 T 28-03-2018 IPR000398 Thymidylate synthase GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 ProSitePatterns PS00091 Thymidylate synthase active site. 126 154 - T 28-03-2018 IPR020940 Thymidylate synthase, active site GO:0004799|GO:0006231 KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS20350 98ba8a967021e17014a5e19e83abd42f 264 Pfam PF00303 Thymidylate synthase 2 264 2.8E-128 T 28-03-2018 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain KEGG: 00240+2.1.1.45|KEGG: 00670+2.1.1.45|MetaCyc: PWY-3841|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7198|MetaCyc: PWY-7199|MetaCyc: PWY-7210|Reactome: R-HSA-499943|Reactome: R-HSA-539107 CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 SUPERFAMILY SSF52540 75 361 4.13E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 Pfam PF00271 Helicase conserved C-terminal domain 236 339 2.7E-26 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 Gene3D G3DSA:3.40.50.300 224 449 1.5E-47 T 28-03-2018 CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 Pfam PF00270 DEAD/DEAH box helicase 25 196 4.0E-50 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 Gene3D G3DSA:3.40.50.300 7 223 1.8E-61 T 28-03-2018 CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 SMART SM00487 20 223 4.8E-63 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 Hamap MF_00968 ATP-dependent RNA helicase RhlE [rhlE]. 1 447 52.5 T 28-03-2018 IPR028622 ATP-dependent RNA helicase RhlE GO:0004004|GO:0042255 CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 SMART SM00490 259 340 7.6E-32 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS08380 83bb90414709dd24a60d040e421fce35 454 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 154 162 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 TIGRFAM TIGR03240 arg_catab_astD: succinylglutamate-semialdehyde dehydrogenase 3 486 1.3E-249 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 242 249 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 270 281 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 SUPERFAMILY SSF53720 3 455 2.23E-119 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 Gene3D G3DSA:3.40.605.10 1 258 9.8E-74 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 Gene3D G3DSA:3.40.309.10 259 453 1.8E-40 T 28-03-2018 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 Hamap MF_01174 N-succinylglutamate 5-semialdehyde dehydrogenase [astD]. 1 486 57.613 T 28-03-2018 IPR017649 Succinylglutamate-semialdehyde dehydrogenase GO:0006527|GO:0043824|GO:0055114 KEGG: 00330+1.2.1.71 CI104_RS11790 37a97f4e4e10080358e2384e38129519 492 Pfam PF00171 Aldehyde dehydrogenase family 9 458 5.3E-115 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS08300 150790ca8d2680f15d12852aa1caa17f 302 Gene3D G3DSA:3.40.50.10680 89 302 8.5E-41 T 28-03-2018 CI104_RS08300 150790ca8d2680f15d12852aa1caa17f 302 Hamap MF_00973 Gluconeogenesis factor. 8 300 32.462 T 28-03-2018 IPR010119 Gluconeogenesis factor CI104_RS08300 150790ca8d2680f15d12852aa1caa17f 302 SUPERFAMILY SSF142338 11 295 1.83E-85 T 28-03-2018 CI104_RS08300 150790ca8d2680f15d12852aa1caa17f 302 TIGRFAM TIGR01826 CofD_related: conserved hypothetical protein 12 259 1.2E-100 T 28-03-2018 IPR010119 Gluconeogenesis factor CI104_RS08300 150790ca8d2680f15d12852aa1caa17f 302 Pfam PF01933 Uncharacterised protein family UPF0052 12 289 6.9E-77 T 28-03-2018 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 SUPERFAMILY SSF53383 1 423 1.08E-137 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 Gene3D G3DSA:3.90.1150.10 2 183 7.6E-47 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 Gene3D G3DSA:3.90.1150.10 187 258 0.0091 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 Hamap MF_00834 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [bioA]. 1 424 51.734 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 242 279 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 Gene3D G3DSA:3.90.1150.10 259 425 2.8E-45 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 Pfam PF00202 Aminotransferase class-III 26 421 6.1E-133 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 TIGRFAM TIGR00508 bioA: adenosylmethionine-8-amino-7-oxononanoate transaminase 13 421 2.6E-184 T 28-03-2018 IPR005815 Adenosylmethionine--8-amino-7-oxononanoate aminotransferase BioA GO:0004015|GO:0009102 KEGG: 00780+2.6.1.62 CI104_RS08265 801925cfa69165a3ac7149fd2a27ad15 429 PIRSF PIRSF000521 25 423 6.6E-29 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS03635 1362d5bc1ad517fd408facc87639705e 72 Gene3D G3DSA:2.20.25.10 1 45 1.1E-4 T 28-03-2018 CI104_RS03635 1362d5bc1ad517fd408facc87639705e 72 Pfam PF04606 Ogr/Delta-like zinc finger 3 49 5.8E-20 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CI104_RS08615 ee7046c77b3dbe0490ae462a423c52d3 208 SUPERFAMILY SSF47616 82 203 3.48E-28 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS08615 ee7046c77b3dbe0490ae462a423c52d3 208 Pfam PF13417 Glutathione S-transferase, N-terminal domain 6 82 4.7E-14 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS08615 ee7046c77b3dbe0490ae462a423c52d3 208 Pfam PF00043 Glutathione S-transferase, C-terminal domain 121 197 1.8E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS08615 ee7046c77b3dbe0490ae462a423c52d3 208 SUPERFAMILY SSF52833 1 85 1.1E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS08615 ee7046c77b3dbe0490ae462a423c52d3 208 Gene3D G3DSA:1.20.1050.10 100 203 2.4E-27 T 28-03-2018 CI104_RS08615 ee7046c77b3dbe0490ae462a423c52d3 208 Gene3D G3DSA:3.40.30.10 1 99 5.7E-26 T 28-03-2018 CI104_RS19800 95a75cba2120952e5fffeca763555d35 136 ProDom PD021295 MATURATION HYDROGENLYASE FORMATE HYCH LYASE HYCE PROCESSING OXIDOREDUCTASE J COMPONENT 1 133 2.0E-66 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CI104_RS19800 95a75cba2120952e5fffeca763555d35 136 Pfam PF07450 Formate hydrogenlyase maturation protein HycH 4 133 4.6E-56 T 28-03-2018 IPR010005 Formate hydrogenlyase maturation HycH CI104_RS24635 3ad0435e4fa443189ea5bf6e5e36023d 483 TIGRFAM TIGR00933 2a38: potassium uptake protein, TrkH family 84 466 8.6E-130 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CI104_RS24635 3ad0435e4fa443189ea5bf6e5e36023d 483 Pfam PF02386 Cation transport protein 37 477 3.1E-92 T 28-03-2018 IPR003445 Cation transporter GO:0006812|GO:0008324|GO:0055085 CI104_RS24635 3ad0435e4fa443189ea5bf6e5e36023d 483 PIRSF PIRSF006247 1 483 4.2E-185 T 28-03-2018 IPR004772 TrkH potassium transport family GO:0016021|GO:0022820|GO:0071805 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 Gene3D G3DSA:2.70.70.10 511 671 3.3E-54 T 28-03-2018 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 SUPERFAMILY SSF55604 419 491 2.09E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 432 449 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 SUPERFAMILY SSF51261 520 667 9.42E-51 T 28-03-2018 IPR011055 Duplicated hybrid motif CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 524 644 4.7E-48 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 586 598 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 Gene3D G3DSA:3.30.1360.60 417 492 8.9E-23 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 TIGRFAM TIGR01998 PTS-II-BC-nag: PTS system, N-acetylglucosamine-specific IIBC component 3 490 1.1E-204 T 28-03-2018 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component GO:0008982|GO:0009401|GO:0015572|GO:0016021|GO:0019866 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 Pfam PF00367 phosphotransferase system, EIIB 421 454 6.4E-13 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 383 479 1.0E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 523 647 8.4E-48 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CI104_RS07705 df0732f5511a8d8001c6e999b6dc4204 672 Pfam PF02378 Phosphotransferase system, EIIC 12 324 3.8E-79 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 Gene3D G3DSA:3.40.50.300 820 1139 2.7E-16 T 28-03-2018 CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 Pfam PF07057 DNA helicase TraI 1433 1551 7.7E-56 T 28-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 SUPERFAMILY SSF55464 1 301 1.65E-99 T 28-03-2018 CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 SUPERFAMILY SSF52540 939 1115 2.83E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 Gene3D G3DSA:3.40.50.300 1179 1458 1.4E-7 T 28-03-2018 CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 Pfam PF08751 TrwC relaxase 10 284 3.8E-73 T 28-03-2018 IPR014862 TrwC relaxase CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 289 4.8E-101 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 Pfam PF13604 AAA domain 971 1157 1.1E-34 T 28-03-2018 CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 SUPERFAMILY SSF52540 1222 1254 4.25E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 SUPERFAMILY SSF52540 1331 1452 4.25E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 SUPERFAMILY SSF52540 1090 1149 4.25E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28460 3ac096d5201c5f67f0140f6cc086a8ae 1753 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1465 0.0 T 28-03-2018 IPR014129 Conjugative transfer relaxase protein TraI CI104_RS15335 00c3fb14937e4410d63b2578635b6a13 323 TIGRFAM TIGR02208 lipid_A_msbB: lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 10 314 9.2E-154 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CI104_RS15335 00c3fb14937e4410d63b2578635b6a13 323 Hamap MF_01944 Lipid A biosynthesis myristoyltransferase [lpxM]. 4 310 53.864 T 28-03-2018 IPR011921 Lipid A biosynthesis myristoyltransferase GO:0009103|GO:0009276|GO:0016021|GO:0016747 KEGG: 00540+2.3.1.243|KEGG: 00600+2.3.1.24 CI104_RS15335 00c3fb14937e4410d63b2578635b6a13 323 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 12 305 3.2E-110 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CI104_RS15335 00c3fb14937e4410d63b2578635b6a13 323 PIRSF PIRSF026649 9 314 5.5E-105 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CI104_RS06660 0791b00c7f5cce6afadc33a5dd86d211 323 Gene3D G3DSA:3.40.50.1820 1 323 4.1E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS06660 0791b00c7f5cce6afadc33a5dd86d211 323 Pfam PF07859 alpha/beta hydrolase fold 87 295 5.5E-51 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CI104_RS06660 0791b00c7f5cce6afadc33a5dd86d211 323 ProSitePatterns PS01173 Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 87 103 - T 28-03-2018 IPR002168 Lipase, GDXG, putative histidine active site GO:0008152|GO:0016787 Reactome: R-HSA-163560 CI104_RS06660 0791b00c7f5cce6afadc33a5dd86d211 323 SUPERFAMILY SSF53474 30 317 3.47E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS06660 0791b00c7f5cce6afadc33a5dd86d211 323 Hamap MF_01958 Acetyl esterase [aes]. 1 319 71.392 T 28-03-2018 IPR023508 Acetyl esterase GO:0005737|GO:0052689 CI104_RS06660 0791b00c7f5cce6afadc33a5dd86d211 323 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 159 171 - T 28-03-2018 IPR033140 Lipase, GDXG, putative serine active site CI104_RS14385 d761c8355537bb25ad8d994a6252d45f 471 Pfam PF11924 Inverse autotransporter, beta-domain 75 344 1.6E-97 T 28-03-2018 IPR024519 Inverse autotransporter, beta-domain CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 Gene3D G3DSA:4.10.520.10 1 94 6.4E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 Pfam PF00216 Bacterial DNA-binding protein 1 91 7.7E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 PRINTS PR01727 Prokaryotic integration host factor signature 75 89 5.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 PRINTS PR01727 Prokaryotic integration host factor signature 41 56 5.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 PRINTS PR01727 Prokaryotic integration host factor signature 59 72 5.1E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 TIGRFAM TIGR00988 hip: integration host factor, beta subunit 1 93 2.6E-53 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 SUPERFAMILY SSF47729 1 91 1.44E-29 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 47 66 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 SMART SM00411 1 91 4.9E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS09050 bb4ab413139efe1e55b7a88fcc10ae28 94 Hamap MF_00381 Integration host factor subunit beta [ihfB]. 1 94 30.373 T 28-03-2018 IPR005685 Integration host factor, beta subunit GO:0003677|GO:0005694|GO:0006310|GO:0006355 CI104_RS11405 f1e1ee7aad1652cb5b69ecd55c5e9c1d 201 Pfam PF00419 Fimbrial protein 41 200 1.9E-12 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS11405 f1e1ee7aad1652cb5b69ecd55c5e9c1d 201 Gene3D G3DSA:2.60.40.1090 38 200 5.8E-28 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS11405 f1e1ee7aad1652cb5b69ecd55c5e9c1d 201 SUPERFAMILY SSF49401 39 200 3.93E-23 T 28-03-2018 IPR008966 Adhesion domain CI104_RS14605 fb5d8342fb5c423f5d64aeafba55f61d 244 Pfam PF07238 PilZ domain 112 230 3.6E-10 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CI104_RS14605 fb5d8342fb5c423f5d64aeafba55f61d 244 Hamap MF_01457 Flagellar brake protein YcgR [ycgR]. 3 239 30.07 T 28-03-2018 IPR023787 Type III secretion system flagellar brake protein YcgR GO:0035438|GO:0071945 CI104_RS14605 fb5d8342fb5c423f5d64aeafba55f61d 244 Gene3D G3DSA:2.30.110.10 9 110 1.2E-26 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS14605 fb5d8342fb5c423f5d64aeafba55f61d 244 Gene3D G3DSA:2.40.10.220 111 244 2.0E-17 T 28-03-2018 CI104_RS14605 fb5d8342fb5c423f5d64aeafba55f61d 244 Pfam PF07317 Flagellar regulator YcgR 8 109 1.2E-28 T 28-03-2018 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CI104_RS12110 6ab1aa6832ec305c1fdefec5b6148d04 136 Pfam PF03061 Thioesterase superfamily 50 127 7.4E-14 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CI104_RS12110 6ab1aa6832ec305c1fdefec5b6148d04 136 SUPERFAMILY SSF54637 1 133 1.23E-27 T 28-03-2018 IPR029069 HotDog domain CI104_RS12110 6ab1aa6832ec305c1fdefec5b6148d04 136 Gene3D G3DSA:3.10.129.10 1 136 2.1E-26 T 28-03-2018 CI104_RS12110 6ab1aa6832ec305c1fdefec5b6148d04 136 Hamap MF_01936 1,4-dihydroxy-2-naphthoyl-CoA hydrolase [menI]. 1 136 46.039 T 28-03-2018 IPR030863 1,4-dihydroxy-2-naphthoyl-CoA hydrolase, MenI GO:0009234|GO:0061522 KEGG: 00130+3.1.2.28|MetaCyc: PWY-5837 CI104_RS12110 6ab1aa6832ec305c1fdefec5b6148d04 136 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 20 135 3.0E-44 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CI104_RS02775 763325c84a96f90d1f2b430d54f3ef9a 103 Pfam PF00829 Ribosomal prokaryotic L21 protein 1 101 1.6E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02775 763325c84a96f90d1f2b430d54f3ef9a 103 SUPERFAMILY SSF141091 1 102 6.8E-37 T 28-03-2018 IPR028909 Ribosomal protein L21-like GO:0005840 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02775 763325c84a96f90d1f2b430d54f3ef9a 103 ProSitePatterns PS01169 Ribosomal protein L21 signature. 72 94 - T 28-03-2018 IPR018258 Ribosomal protein L21, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02775 763325c84a96f90d1f2b430d54f3ef9a 103 TIGRFAM TIGR00061 L21: ribosomal protein bL21 2 101 4.8E-45 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02775 763325c84a96f90d1f2b430d54f3ef9a 103 Hamap MF_01363 50S ribosomal protein L21 [rplU]. 1 103 26.783 T 28-03-2018 IPR001787 Ribosomal protein L21 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 TIGRFAM TIGR00874 talAB: transaldolase 2 316 9.5E-164 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 Hamap MF_00492 Transaldolase [tal]. 1 316 52.908 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 SUPERFAMILY SSF51569 1 315 3.24E-114 T 28-03-2018 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 ProSitePatterns PS00958 Transaldolase active site. 128 145 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 Gene3D G3DSA:3.20.20.70 1 316 1.3E-118 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 13 310 1.1E-102 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS18325 92f51407878fab6e8fc5015bd2ce3056 316 ProSitePatterns PS01054 Transaldolase signature 1. 30 38 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 TIGRFAM TIGR00328 flhB: flagellar biosynthetic protein FlhB 8 355 9.8E-140 T 28-03-2018 IPR006136 Flagellar biosynthetic protein FlhB GO:0015031|GO:0016021|GO:0044780 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 229 246 2.9E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 273 288 2.9E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 11 33 2.9E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 209 227 2.9E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 PRINTS PR00950 Type III secretion system inner membrane S protein family signature 303 324 2.9E-42 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 SUPERFAMILY SSF160544 245 352 1.15E-41 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 Pfam PF01312 FlhB HrpN YscU SpaS Family 8 348 5.9E-125 T 28-03-2018 IPR006135 Type III secretion system substrate exporter GO:0009306|GO:0016020 CI104_RS15450 7ee4d7cada5622b69a09732d7c1c44be 384 Gene3D G3DSA:3.40.1690.10 219 354 1.1E-58 T 28-03-2018 IPR029025 Type III secretion system substrate exporter, C-terminal CI104_RS11805 5a41de56d8e82fe8a4c483a9f8c19ab2 161 Pfam PF07813 LTXXQ motif family protein 46 141 5.5E-23 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CI104_RS11805 5a41de56d8e82fe8a4c483a9f8c19ab2 161 PIRSF PIRSF034445 1 152 2.2E-31 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CI104_RS11570 44ed31796e9bacf747aa571b92f6257f 393 Gene3D G3DSA:1.20.1250.20 9 199 3.1E-17 T 28-03-2018 CI104_RS11570 44ed31796e9bacf747aa571b92f6257f 393 SUPERFAMILY SSF103473 13 387 2.49E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS11570 44ed31796e9bacf747aa571b92f6257f 393 Gene3D G3DSA:1.20.1250.20 200 391 7.0E-20 T 28-03-2018 CI104_RS11570 44ed31796e9bacf747aa571b92f6257f 393 Pfam PF07690 Major Facilitator Superfamily 22 348 4.8E-22 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS11570 44ed31796e9bacf747aa571b92f6257f 393 TIGRFAM TIGR00896 CynX: cyanate transporter 14 367 1.2E-138 T 28-03-2018 IPR004747 Cyanate transport system protein GO:0016021 CI104_RS04310 f68eb66161bbb471149fc04e51aab94d 227 Pfam PF00005 ABC transporter 19 163 9.3E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS04310 f68eb66161bbb471149fc04e51aab94d 227 SMART SM00382 28 213 7.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS04310 f68eb66161bbb471149fc04e51aab94d 227 SUPERFAMILY SSF52540 2 219 4.66E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04310 f68eb66161bbb471149fc04e51aab94d 227 Gene3D G3DSA:3.40.50.300 1 222 6.6E-50 T 28-03-2018 CI104_RS16645 636cb506f5f1c04e87171ed0fa73cf9f 350 Gene3D G3DSA:3.20.20.70 52 347 1.8E-66 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS16645 636cb506f5f1c04e87171ed0fa73cf9f 350 SMART SM01133 68 326 6.8E-42 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS16645 636cb506f5f1c04e87171ed0fa73cf9f 350 Pfam PF01791 DeoC/LacD family aldolase 69 326 4.3E-75 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS16645 636cb506f5f1c04e87171ed0fa73cf9f 350 SUPERFAMILY SSF51569 57 242 1.3E-65 T 28-03-2018 CI104_RS16645 636cb506f5f1c04e87171ed0fa73cf9f 350 SUPERFAMILY SSF51569 270 344 1.3E-65 T 28-03-2018 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 84 94 4.4E-19 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 40 51 4.4E-19 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 298 315 4.4E-19 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 219 231 4.4E-19 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 141 152 4.4E-19 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 Pfam PF00267 Gram-negative porin 15 346 9.6E-154 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 Gene3D G3DSA:2.40.160.10 20 346 3.5E-56 T 28-03-2018 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 84 106 4.4E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 10 26 4.4E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 254 273 4.4E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 139 161 4.4E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 225 242 4.4E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 PRINTS PR00183 E.coli/Salmonella-type porin signature 39 57 4.4E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 298 314 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site CI104_RS13160 74c7eede3b530c838d2916a46de4917a 346 SUPERFAMILY SSF56935 10 346 1.2E-85 T 28-03-2018 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Pfam PF10576 Iron-sulfur binding domain of endonuclease III 192 208 2.5E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 SMART SM00525 191 211 5.7E-4 T 28-03-2018 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif GO:0051539 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Pfam PF14815 NUDIX domain 234 343 3.7E-25 T 28-03-2018 IPR029119 MutY, C-terminal Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 SUPERFAMILY SSF48150 3 225 4.71E-78 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 ProSitePatterns PS00764 Endonuclease III iron-sulfur binding region signature. 192 208 - T 28-03-2018 IPR004035 Endonuclease III, iron-sulphur binding site Reactome: R-HSA-110330|Reactome: R-HSA-110331|Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 SMART SM00478 39 190 6.8E-52 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 SUPERFAMILY SSF55811 220 344 2.7E-26 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Gene3D G3DSA:1.10.1670.10 118 225 7.0E-34 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 36 168 3.0E-23 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Gene3D G3DSA:1.10.340.30 21 117 8.1E-32 T 28-03-2018 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Pfam PF00633 Helix-hairpin-helix motif 100 127 1.6E-6 T 28-03-2018 IPR000445 Helix-hairpin-helix motif GO:0003677 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 ProSitePatterns PS01155 Endonuclease III family signature. 102 131 - T 28-03-2018 IPR004036 Endonuclease III-like, conserved site-2 Reactome: R-HSA-110357 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 TIGRFAM TIGR01084 mutY: A/G-specific adenine glycosylase 5 277 1.3E-129 T 28-03-2018 IPR005760 A/G-specific adenine glycosylase MutY GO:0006284|GO:0019104 CI104_RS04145 964addc52fc49624a0b862bf5cc7763d 350 Gene3D G3DSA:3.90.79.10 231 348 2.1E-11 T 28-03-2018 CI104_RS20525 76f75667dd32bc74989e75c233484218 241 SUPERFAMILY SSF49584 144 234 4.45E-16 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS20525 76f75667dd32bc74989e75c233484218 241 SUPERFAMILY SSF49354 24 150 2.43E-31 T 28-03-2018 IPR008962 PapD-like CI104_RS20525 76f75667dd32bc74989e75c233484218 241 Gene3D G3DSA:2.60.40.10 27 148 4.5E-29 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20525 76f75667dd32bc74989e75c233484218 241 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 174 228 7.8E-10 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS20525 76f75667dd32bc74989e75c233484218 241 Gene3D G3DSA:2.60.40.10 154 241 9.4E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20525 76f75667dd32bc74989e75c233484218 241 PRINTS PR00969 Pili chaperone signature 132 147 3.5E-23 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20525 76f75667dd32bc74989e75c233484218 241 PRINTS PR00969 Pili chaperone signature 76 97 3.5E-23 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20525 76f75667dd32bc74989e75c233484218 241 PRINTS PR00969 Pili chaperone signature 169 184 3.5E-23 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20525 76f75667dd32bc74989e75c233484218 241 PRINTS PR00969 Pili chaperone signature 27 36 3.5E-23 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20525 76f75667dd32bc74989e75c233484218 241 PRINTS PR00969 Pili chaperone signature 105 122 3.5E-23 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20525 76f75667dd32bc74989e75c233484218 241 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 29 150 2.5E-34 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 ProSitePatterns PS00755 Protein secY signature 1. 76 95 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 Gene3D G3DSA:1.10.3370.10 12 439 1.5E-160 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 Pfam PF00344 SecY translocase 76 417 6.5E-120 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 Hamap MF_01465 Protein translocase subunit SecY [secY]. 10 433 29.964 T 28-03-2018 IPR026593 Protein translocase subunit SecY CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PIRSF PIRSF004557 11 441 4.3E-124 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 370 388 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 180 203 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 315 337 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 402 420 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 154 179 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 75 95 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 116 139 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 23 41 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 PRINTS PR00303 Preprotein translocase SecY subunit signature 272 291 7.7E-99 T 28-03-2018 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 SUPERFAMILY SSF103491 16 424 3.53E-134 T 28-03-2018 IPR023201 SecY subunit domain Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 TIGRFAM TIGR00967 3a0501s007: preprotein translocase, SecY subunit 20 429 1.5E-141 T 28-03-2018 IPR002208 SecY/SEC61-alpha family GO:0015031|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS02145 94f7684647872b8ce2e068cf6725031c 443 ProSitePatterns PS00756 Protein secY signature 2. 173 190 - T 28-03-2018 IPR030659 SecY conserved site Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 Pfam PF08402 TOBE domain 295 375 1.0E-20 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 Pfam PF00005 ABC transporter 36 177 3.3E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 Gene3D G3DSA:3.40.50.300 16 268 5.6E-77 T 28-03-2018 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 50 375 1.2E-150 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 Gene3D G3DSA:2.40.50.140 306 368 2.2E-7 T 28-03-2018 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 Gene3D G3DSA:2.40.50.100 269 305 0.11 T 28-03-2018 CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 SUPERFAMILY SSF52540 19 257 3.33E-87 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 SUPERFAMILY SSF50331 252 375 2.48E-18 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS08715 411fa7222af2f01e7cf456ebf8ed7818 377 SMART SM00382 44 227 3.0E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 SMART SM00671 102 137 220.0 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 SMART SM00671 179 216 2.0E-4 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 SMART SM00671 67 101 24.0 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 SMART SM00671 35 66 4.5 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 SMART SM00671 142 177 7.8E-5 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Pfam PF08238 Sel1 repeat 85 101 25.0 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Pfam PF08238 Sel1 repeat 41 66 0.088 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Pfam PF08238 Sel1 repeat 143 173 6.5E-4 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Pfam PF08238 Sel1 repeat 180 215 1.4E-5 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 SUPERFAMILY SSF81901 85 217 5.69E-19 T 28-03-2018 CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Gene3D G3DSA:2.60.40.1180 177 222 0.0023 T 28-03-2018 CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Gene3D G3DSA:2.60.40.1180 24 47 0.22 T 28-03-2018 CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Gene3D G3DSA:2.60.40.1180 78 176 4.1E-10 T 28-03-2018 CI104_RS23145 8c371ddc1f687ceeb5bfcd16a12330b3 229 Gene3D G3DSA:2.60.40.1180 49 77 0.0017 T 28-03-2018 CI104_RS10095 091870e3a6ffc0a19c48eff8ed053e91 649 Pfam PF03239 Iron permease FTR1 family 166 558 8.6E-64 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CI104_RS08155 e118e755ff31697a3d1c3ec0ab9b371d 254 Pfam PF00005 ABC transporter 27 160 2.8E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08155 e118e755ff31697a3d1c3ec0ab9b371d 254 SUPERFAMILY SSF52540 5 227 1.43E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08155 e118e755ff31697a3d1c3ec0ab9b371d 254 Gene3D G3DSA:3.40.50.300 2 245 3.0E-50 T 28-03-2018 CI104_RS08155 e118e755ff31697a3d1c3ec0ab9b371d 254 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08155 e118e755ff31697a3d1c3ec0ab9b371d 254 SMART SM00382 29 209 1.6E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 Gene3D G3DSA:3.40.190.10 90 177 2.9E-19 T 28-03-2018 CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 Gene3D G3DSA:1.10.10.10 1 85 1.4E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 Pfam PF03466 LysR substrate binding domain 91 291 1.7E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 SUPERFAMILY SSF46785 4 85 2.42E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 Gene3D G3DSA:3.40.190.10 178 264 1.2E-18 T 28-03-2018 CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 63 2.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 6.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 6.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 6.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01645 760a166653bcb1477c438fc4fb672356 302 SUPERFAMILY SSF53850 92 297 1.6E-41 T 28-03-2018 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 PRINTS PR00084 Mannitol dehydrogenase signature 179 192 2.4E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 PRINTS PR00084 Mannitol dehydrogenase signature 27 37 2.4E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 PRINTS PR00084 Mannitol dehydrogenase signature 248 263 2.4E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 PRINTS PR00084 Mannitol dehydrogenase signature 218 231 2.4E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 SUPERFAMILY SSF48179 283 485 2.65E-64 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 Gene3D G3DSA:3.40.50.720 1 281 5.5E-111 T 28-03-2018 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 216 462 5.4E-98 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 218 230 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 26 188 1.0E-50 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 SUPERFAMILY SSF51735 5 281 1.06E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16990 78ce2ac8254beab227f2bf1c143255c2 488 Gene3D G3DSA:1.10.1040.10 282 488 3.1E-65 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Gene3D G3DSA:2.40.30.10 221 438 1.3E-46 T 28-03-2018 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Pfam PF00258 Flavodoxin 67 195 2.6E-31 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Hamap MF_01541 Sulfite reductase [NADPH] flavoprotein alpha-component [cysJ]. 2 599 52.831 T 28-03-2018 IPR029758 Sulphite reductase [NADPH] flavoprotein, alpha chain, Proteobacteria GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 SUPERFAMILY SSF63380 228 446 8.97E-64 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Gene3D G3DSA:3.40.50.80 442 598 2.7E-36 T 28-03-2018 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PIRSF PIRSF000207 1 599 2.0E-281 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00369 Flavodoxin signature 145 155 8.8E-15 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00369 Flavodoxin signature 65 78 8.8E-15 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00369 Flavodoxin signature 169 188 8.8E-15 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00369 Flavodoxin signature 113 124 8.8E-15 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Pfam PF00175 Oxidoreductase NAD-binding domain 457 563 1.2E-21 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Gene3D G3DSA:3.40.50.360 46 220 4.0E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 494 505 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 548 556 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 270 280 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 386 393 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 456 475 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 481 490 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 419 428 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 PRINTS PR00371 Flavoprotein pyridine nucleotide cytochrome reductase signature 525 541 6.5E-30 T 28-03-2018 IPR001709 Flavoprotein pyridine nucleotide cytochrome reductase GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 Pfam PF00667 FAD binding domain 230 424 2.0E-23 T 28-03-2018 IPR003097 FAD-binding, type 1 GO:0016491|GO:0055114 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 SUPERFAMILY SSF52343 444 599 1.18E-51 T 28-03-2018 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 TIGRFAM TIGR01931 cysJ: sulfite reductase [NADPH] flavoprotein, alpha-component 10 599 1.5E-283 T 28-03-2018 IPR010199 Sulphite reductase [NADPH] flavoprotein, alpha chain GO:0000103|GO:0004783|GO:0010181|GO:0019344|GO:0050660|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS20000 343f1146a8ea21c90182c0405a28c0a3 599 SUPERFAMILY SSF52218 60 210 1.26E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 8.3E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 SUPERFAMILY SSF46785 1 86 9.08E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 Gene3D G3DSA:1.10.10.10 1 83 1.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 SUPERFAMILY SSF53850 89 294 8.38E-30 T 28-03-2018 CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 2.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 Gene3D G3DSA:3.40.190.10 84 204 1.6E-16 T 28-03-2018 CI104_RS16000 f6d0729f6873c40ce4d1838204d2c62b 305 Pfam PF03466 LysR substrate binding domain 87 288 2.3E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 1.7E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 1.7E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 81 92 1.7E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 1.7E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 176 193 1.7E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 155 174 1.7E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 13 245 2.8E-71 T 28-03-2018 CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 186 0.0086 T 28-03-2018 CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 142 170 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 81 92 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 155 174 1.3E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 Gene3D G3DSA:3.40.50.720 47 248 4.0E-61 T 28-03-2018 CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 Gene3D G3DSA:3.40.50.720 1 46 4.3E-11 T 28-03-2018 CI104_RS09790 0a429b76a76bc5530e53910ae8faf4b8 248 SUPERFAMILY SSF51735 4 246 2.67E-83 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 SUPERFAMILY SSF51905 107 271 8.16E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 SUPERFAMILY SSF51905 1 54 8.16E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 SUPERFAMILY SSF51905 359 416 8.16E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 Pfam PF01266 FAD dependent oxidoreductase 2 396 7.9E-74 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 Gene3D G3DSA:3.50.50.60 1 426 4.7E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 Hamap MF_01202 D-amino acid dehydrogenase [dadA]. 1 410 54.58 T 28-03-2018 IPR023080 D-amino acid dehydrogenase DadA GO:0008718|GO:0019478|GO:0055114 CI104_RS14630 3fcb1de92905f25d595cefc535ffd0ba 432 SUPERFAMILY SSF54373 269 359 1.44E-16 T 28-03-2018 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 168 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 39 60 9.9E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 9.9E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 107 123 9.9E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 PRINTS PR00146 Dihydrodipicolinate synthase signature 75 93 9.9E-17 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 PIRSF PIRSF001365 3 306 1.9E-74 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 Gene3D G3DSA:3.20.20.70 1 306 3.6E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 SMART SM01130 5 299 1.7E-96 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 SUPERFAMILY SSF51569 2 300 9.42E-81 T 28-03-2018 CI104_RS09900 ced6973d40957f71d9f64e6c01fe04d6 306 Pfam PF00701 Dihydrodipicolinate synthetase family 6 297 7.3E-72 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS27010 86135d56ce0597c0f0cced6aa45bc07e 202 SUPERFAMILY SSF53335 33 165 2.48E-14 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27010 86135d56ce0597c0f0cced6aa45bc07e 202 Gene3D G3DSA:3.40.50.150 75 164 1.9E-5 T 28-03-2018 CI104_RS02485 9eb9cf24071bac15d6b865c332c89e45 489 Pfam PF10150 Ribonuclease E/G family 124 393 2.2E-101 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CI104_RS02485 9eb9cf24071bac15d6b865c332c89e45 489 SUPERFAMILY SSF50249 39 128 2.62E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS02485 9eb9cf24071bac15d6b865c332c89e45 489 Gene3D G3DSA:2.40.50.140 32 127 5.7E-31 T 28-03-2018 CI104_RS02485 9eb9cf24071bac15d6b865c332c89e45 489 Pfam PF00575 S1 RNA binding domain 38 109 1.5E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS02485 9eb9cf24071bac15d6b865c332c89e45 489 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 426 1.1E-178 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CI104_RS02485 9eb9cf24071bac15d6b865c332c89e45 489 SMART SM00316 37 122 1.2E-9 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS16945 079d3cd32adf7531d2398ebdffdcb811 311 Gene3D G3DSA:3.40.1790.10 6 311 3.7E-138 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CI104_RS16945 079d3cd32adf7531d2398ebdffdcb811 311 Hamap MF_01876 Pseudouridine-5'-phosphate glycosidase [psuG]. 15 309 43.585 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CI104_RS16945 079d3cd32adf7531d2398ebdffdcb811 311 Pfam PF04227 Indigoidine synthase A like protein 16 306 8.1E-131 T 28-03-2018 IPR007342 Pseudouridine-5'-phosphate glycosidase GO:0016798 KEGG: 00240+4.2.1.70|MetaCyc: PWY-6019 CI104_RS16945 079d3cd32adf7531d2398ebdffdcb811 311 SUPERFAMILY SSF110581 9 308 5.49E-117 T 28-03-2018 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Pfam PF01612 3'-5' exonuclease 330 517 2.8E-45 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SUPERFAMILY SSF56672 523 928 3.11E-161 T 28-03-2018 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SMART SM00482 686 892 5.7E-126 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Pfam PF00476 DNA polymerase family A 552 925 3.6E-159 T 28-03-2018 IPR001098 DNA-directed DNA polymerase, family A, palm domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Gene3D G3DSA:1.10.150.20 185 269 1.9E-25 T 28-03-2018 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SUPERFAMILY SSF88723 7 170 7.85E-57 T 28-03-2018 IPR029060 PIN domain-like CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SMART SM00474 330 517 2.6E-49 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Gene3D G3DSA:1.20.1060.10 543 656 2.2E-32 T 28-03-2018 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Gene3D G3DSA:3.40.50.1010 7 184 3.4E-68 T 28-03-2018 IPR029060 PIN domain-like CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 9 170 1.5E-54 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Gene3D G3DSA:3.30.420.10 322 542 2.1E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 845 861 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 813 824 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 700 723 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 655 677 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 791 802 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 754 779 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 678 693 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 730 743 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 PRINTS PR00868 DNA-polymerase family A (pol I) signature 875 888 1.3E-80 T 28-03-2018 IPR002298 DNA polymerase A GO:0003887|GO:0006261 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SUPERFAMILY SSF47807 171 291 9.72E-31 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 ProSitePatterns PS00447 DNA polymerase family A signature. 754 773 - T 28-03-2018 IPR019760 DNA-directed DNA polymerase, family A, conserved site GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SUPERFAMILY SSF53098 326 518 4.77E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 TIGRFAM TIGR00593 pola: DNA polymerase I 9 928 3.7E-288 T 28-03-2018 IPR018320 DNA polymerase 1 GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 171 272 2.5E-31 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SMART SM00475 7 268 1.5E-143 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 SMART SM00279 173 208 1.2E-13 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Gene3D G3DSA:3.30.70.370 754 928 6.0E-53 T 28-03-2018 CI104_RS24570 ea210863ebcd415931df5c9db238b8c4 928 Gene3D G3DSA:3.30.70.370 657 749 6.8E-18 T 28-03-2018 CI104_RS03110 1553210c77ac2b82b0d14c5d1315f679 419 SUPERFAMILY SSF53850 30 417 1.01E-69 T 28-03-2018 CI104_RS03110 1553210c77ac2b82b0d14c5d1315f679 419 Gene3D G3DSA:3.40.190.10 224 378 3.5E-14 T 28-03-2018 CI104_RS03110 1553210c77ac2b82b0d14c5d1315f679 419 Gene3D G3DSA:3.40.190.10 28 214 3.0E-38 T 28-03-2018 CI104_RS03110 1553210c77ac2b82b0d14c5d1315f679 419 Pfam PF01547 Bacterial extracellular solute-binding protein 51 333 3.4E-39 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 SMART SM00859 3 123 1.1E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 Gene3D G3DSA:3.40.50.720 1 144 1.2E-17 T 28-03-2018 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 ProSitePatterns PS01103 Aspartate-semialdehyde dehydrogenase signature. 262 276 - T 28-03-2018 IPR000319 Aspartate-semialdehyde dehydrogenase, conserved site GO:0004073|GO:0006520|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 SUPERFAMILY SSF55347 135 355 4.05E-79 T 28-03-2018 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 TIGRFAM TIGR01745 asd_gamma: aspartate-semialdehyde dehydrogenase 2 367 5.2E-223 T 28-03-2018 IPR011534 Aspartate-semialdehyde dehydrogenase, gamma-type GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 Gene3D G3DSA:3.30.360.10 145 351 7.3E-61 T 28-03-2018 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 3 121 2.8E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 145 354 1.1E-60 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 PIRSF PIRSF000148 1 368 2.0E-71 T 28-03-2018 CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 SUPERFAMILY SSF51735 1 148 1.22E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01540 d04eaa55200482c0c92f10498e456207 368 Hamap MF_02121 Aspartate-semialdehyde dehydrogenase [asd]. 1 368 34.507 T 28-03-2018 IPR012080 Aspartate-semialdehyde dehydrogenase GO:0004073|GO:0009086|GO:0009088|GO:0009089|GO:0009097|GO:0050661|GO:0055114 KEGG: 00260+1.2.1.11|KEGG: 00261+1.2.1.11|KEGG: 00270+1.2.1.11|KEGG: 00300+1.2.1.11|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 TIGRFAM TIGR00391 hydA: hydrogenase (NiFe) small subunit (hydA) 3 365 5.0E-191 T 28-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 Gene3D G3DSA:4.10.480.10 232 309 2.2E-28 T 28-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 Pfam PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal 224 303 6.7E-26 T 28-03-2018 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 59 204 2.5E-32 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 Gene3D G3DSA:3.40.50.700 42 231 1.3E-55 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 SUPERFAMILY SSF56770 46 302 3.03E-84 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 185 208 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 253 279 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 44 66 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 67 91 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 211 228 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 113 136 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 229 247 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PRINTS PR00614 Ni-Fe hydrogenase small subunit signature 156 180 1.5E-68 T 28-03-2018 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 PIRSF PIRSF000310 2 367 5.1E-136 T 28-03-2018 IPR001821 [NiFe]-hydrogenase, small subunit GO:0008901|GO:0009375|GO:0051536|GO:0055114 CI104_RS04020 8d5223c4597328200c1914799d0b5e84 372 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 13 37 4.9E-6 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CI104_RS11595 8c817095354563f285c553aec780a013 496 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 32 304 4.1E-131 T 28-03-2018 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 CI104_RS11595 8c817095354563f285c553aec780a013 496 Gene3D G3DSA:3.30.70.270 337 496 2.1E-32 T 28-03-2018 CI104_RS11595 8c817095354563f285c553aec780a013 496 SMART SM00267 333 495 5.9E-34 T 28-03-2018 IPR000160 GGDEF domain CI104_RS11595 8c817095354563f285c553aec780a013 496 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 494 1.6E-32 T 28-03-2018 IPR000160 GGDEF domain CI104_RS11595 8c817095354563f285c553aec780a013 496 Pfam PF00990 Diguanylate cyclase, GGDEF domain 346 494 9.2E-33 T 28-03-2018 IPR000160 GGDEF domain CI104_RS11595 8c817095354563f285c553aec780a013 496 Gene3D G3DSA:3.30.450.20 56 241 6.9E-6 T 28-03-2018 CI104_RS11595 8c817095354563f285c553aec780a013 496 SUPERFAMILY SSF55073 349 494 2.75E-30 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS13895 39584a3ce87db688fef4dec9be54a640 345 Pfam PF01032 FecCD transport family 24 341 1.9E-87 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS13895 39584a3ce87db688fef4dec9be54a640 345 SUPERFAMILY SSF81345 14 341 3.27E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS13895 39584a3ce87db688fef4dec9be54a640 345 Gene3D G3DSA:1.10.3470.10 12 345 2.4E-68 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 ProSitePatterns PS00648 Bacterial ribonuclease P protein component signature. 56 70 - T 28-03-2018 IPR020539 Ribonuclease P, conserved site GO:0004526 CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 Gene3D G3DSA:3.30.230.10 1 119 6.1E-32 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 SUPERFAMILY SSF54211 5 115 3.03E-31 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 Pfam PF00825 Ribonuclease P 6 111 1.1E-32 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 TIGRFAM TIGR00188 rnpA: ribonuclease P protein component 5 115 2.1E-37 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 ProDom PD003629 P RIBONUCLEASE COMPONENT HYDROLASE RNASE C5 RNASEP RNA-BINDING PROCESSING ENDONUCLEASE 17 105 8.0E-46 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CI104_RS25280 96f9a31819e258325ebfe4e831cd107e 119 Hamap MF_00227 Ribonuclease P protein component [rnpA]. 6 115 17.789 T 28-03-2018 IPR000100 Ribonuclease P GO:0000049|GO:0004526|GO:0008033 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 Hamap MF_01487 RecBCD enzyme subunit RecD [recD]. 16 602 53.556 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 Pfam PF13604 AAA domain 154 315 5.6E-31 T 28-03-2018 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 SUPERFAMILY SSF52540 6 360 3.22E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 TIGRFAM TIGR01447 recD: exodeoxyribonuclease V, alpha subunit 9 602 1.3E-194 T 28-03-2018 IPR006344 RecBCD enzyme subunit RecD GO:0004386|GO:0006302|GO:0006310|GO:0008854|GO:0009338 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 Gene3D G3DSA:3.40.50.300 111 355 2.1E-64 T 28-03-2018 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 Pfam PF13538 UvrD-like helicase C-terminal domain 534 579 7.4E-15 T 28-03-2018 IPR027785 UvrD-like helicase C-terminal domain CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 Gene3D G3DSA:3.40.50.300 468 593 6.2E-23 T 28-03-2018 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 Gene3D G3DSA:3.40.50.300 365 467 9.5E-18 T 28-03-2018 CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 SMART SM00382 163 320 0.0092 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 SUPERFAMILY SSF52540 434 601 1.06E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20310 fda915b2aa119a6771f3bd638addd7b6 608 SUPERFAMILY SSF52540 281 378 1.06E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08325 84065cff9d9b626e2d85c5713fbcc4da 150 Pfam PF02391 MoaE protein 12 121 1.7E-35 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08325 84065cff9d9b626e2d85c5713fbcc4da 150 Gene3D G3DSA:3.90.1170.40 2 149 9.7E-55 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08325 84065cff9d9b626e2d85c5713fbcc4da 150 SUPERFAMILY SSF54690 6 150 1.06E-53 T 28-03-2018 IPR003448 Molybdopterin biosynthesis MoaE GO:0006777 KEGG: 00790+2.8.1.12|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS09815 0ae66ffe005185f98c0a960eb3279bdc 262 Gene3D G3DSA:3.30.450.40 76 255 1.2E-38 T 28-03-2018 IPR029016 GAF domain-like CI104_RS09815 0ae66ffe005185f98c0a960eb3279bdc 262 SUPERFAMILY SSF55781 69 252 3.27E-42 T 28-03-2018 IPR029016 GAF domain-like CI104_RS09815 0ae66ffe005185f98c0a960eb3279bdc 262 Pfam PF01614 Bacterial transcriptional regulator 124 247 6.9E-40 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS09815 0ae66ffe005185f98c0a960eb3279bdc 262 Gene3D G3DSA:1.10.10.10 11 69 0.0012 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09815 0ae66ffe005185f98c0a960eb3279bdc 262 SUPERFAMILY SSF46785 7 77 2.57E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09815 0ae66ffe005185f98c0a960eb3279bdc 262 SMART SM00346 6 94 6.5E-30 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:1.10.260.40 33 73 7.1E-5 T 28-03-2018 CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 SUPERFAMILY SSF53098 118 290 1.52E-18 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:3.30.420.10 114 323 5.1E-28 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 SUPERFAMILY SSF46689 2 39 9.41E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 Gene3D G3DSA:1.10.10.60 1 32 3.5E-14 T 28-03-2018 CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 Pfam PF13936 Helix-turn-helix domain 2 39 3.4E-7 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain CI104_RS28555 a352a3e0c959e2d28a8574ecdc98e0dc 341 Pfam PF00665 Integrase core domain 118 243 1.7E-23 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Gene3D G3DSA:1.10.1060.10 546 703 1.3E-12 T 28-03-2018 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Pfam PF02913 FAD linked oxidases, C-terminal domain 281 539 4.4E-65 T 28-03-2018 IPR004113 FAD-linked oxidase, C-terminal GO:0003824|GO:0050660 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Pfam PF01565 FAD binding domain 52 192 1.1E-36 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 SUPERFAMILY SSF46548 655 691 9.07E-8 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 SUPERFAMILY SSF46548 518 622 9.07E-8 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Gene3D G3DSA:1.10.45.10 473 539 8.5E-10 T 28-03-2018 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 SUPERFAMILY SSF56176 18 282 5.14E-54 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Gene3D G3DSA:3.30.465.10 105 304 1.8E-43 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 673 684 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Gene3D G3DSA:3.30.43.10 4 104 3.2E-18 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 SUPERFAMILY SSF55103 258 542 3.27E-54 T 28-03-2018 IPR016164 FAD-linked oxidase-like, C-terminal GO:0003824|GO:0050660 CI104_RS12105 ee173dbf430ee61f48da65c2980db820 1018 Pfam PF13183 4Fe-4S dicluster domain 576 687 4.5E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 Pfam PF10369 Small subunit of acetolactate synthase 84 158 9.0E-24 T 28-03-2018 IPR019455 Acetolactate synthase, small subunit, C-terminal KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 1 159 1.2E-68 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 Gene3D G3DSA:3.30.70.1150 88 161 2.8E-25 T 28-03-2018 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 SUPERFAMILY SSF55021 79 162 2.61E-26 T 28-03-2018 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 Gene3D G3DSA:3.30.70.260 2 87 4.8E-24 T 28-03-2018 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 1 76 1.0E-36 T 28-03-2018 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 SUPERFAMILY SSF55021 2 74 1.89E-22 T 28-03-2018 CI104_RS04845 26c9c6c32f0403035fb406478aa2e6de 163 Pfam PF01842 ACT domain 4 68 3.3E-15 T 28-03-2018 IPR002912 ACT domain CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 SUPERFAMILY SSF55129 3 59 5.1E-21 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 TIGRFAM TIGR01308 rpmD_bact: ribosomal protein uL30 5 59 5.0E-28 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 Hamap MF_01371_B 50S ribosomal protein L30 [rpmD]. 2 59 21.935 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 Pfam PF00327 Ribosomal protein L30p/L7e 5 54 9.9E-19 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 Gene3D G3DSA:3.30.1390.20 5 59 1.7E-23 T 28-03-2018 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 PIRSF PIRSF002211 1 59 2.8E-29 T 28-03-2018 IPR005996 Ribosomal protein L30, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02135 4feffea74a7b86a96c498c445aa4994e 59 ProSitePatterns PS00634 Ribosomal protein L30 signature. 23 55 - T 28-03-2018 IPR018038 Ribosomal protein L30, conserved site CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 PIRSF PIRSF000303 1 183 3.7E-66 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 ProSitePatterns PS00460 Glutathione peroxidases active site. 25 40 - T 28-03-2018 IPR029759 Glutathione peroxidase active site Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 SUPERFAMILY SSF52833 4 182 1.3E-55 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 PRINTS PR01011 Glutathione peroxidase family signature 143 152 2.5E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 PRINTS PR01011 Glutathione peroxidase family signature 23 40 2.5E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 PRINTS PR01011 Glutathione peroxidase family signature 58 74 2.5E-19 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 Hamap MF_02061 Thioredoxin/glutathione peroxidase BtuE [btuE]. 3 183 51.94 T 28-03-2018 IPR033674 Thioredoxin/glutathione peroxidase BtuE KEGG: 00480+1.11.1.15+1.11.1.9|KEGG: 00590+1.11.1.9|MetaCyc: PWY-4081 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 ProSitePatterns PS00763 Glutathione peroxidases signature 2. 61 68 - T 28-03-2018 IPR029760 Glutathione peroxidase conserved site Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 Pfam PF00255 Glutathione peroxidase 6 111 5.1E-45 T 28-03-2018 IPR000889 Glutathione peroxidase GO:0004602|GO:0006979|GO:0055114 Reactome: R-HSA-3299685 CI104_RS11975 2376bbe30d15ee36eb03b1f3fe0fd4e0 183 Gene3D G3DSA:3.40.30.10 4 183 7.5E-46 T 28-03-2018 CI104_RS18290 6ff86e8f34fc62289a48391a7b778b14 267 Gene3D G3DSA:1.20.1200.10 94 254 4.3E-18 T 28-03-2018 CI104_RS18290 6ff86e8f34fc62289a48391a7b778b14 267 Pfam PF01923 Cobalamin adenosyltransferase 95 246 1.4E-13 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CI104_RS18290 6ff86e8f34fc62289a48391a7b778b14 267 PIRSF PIRSF012294 1 255 1.1E-108 T 28-03-2018 IPR009194 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT-type GO:0005524|GO:0006580|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS18290 6ff86e8f34fc62289a48391a7b778b14 267 SUPERFAMILY SSF89028 93 250 1.31E-13 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 PIRSF PIRSF004682 1 188 5.3E-67 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 SUPERFAMILY SSF56784 3 184 2.07E-52 T 28-03-2018 IPR023214 HAD-like domain CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 Pfam PF13242 HAD-hyrolase-like 109 179 4.7E-13 T 28-03-2018 CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 TIGRFAM TIGR01656 Histidinol-ppas: histidinol-phosphate phosphatase domain 6 155 9.1E-39 T 28-03-2018 IPR006543 Histidinol-phosphate phosphatase GO:0016791 CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 Gene3D G3DSA:3.40.50.1000 4 188 1.7E-32 T 28-03-2018 IPR023214 HAD-like domain CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 TIGRFAM TIGR00213 GmhB_yaeD: D,D-heptose 1,7-bisphosphate phosphatase 6 180 1.0E-97 T 28-03-2018 IPR004446 D,D-heptose 1,7-bisphosphate phosphatase GO:0005975|GO:0016791 CI104_RS05455 c672220c7f944570838d918b8ca0f890 188 TIGRFAM TIGR01662 HAD-SF-IIIA: HAD hydrolase, family IIIA 7 156 8.6E-39 T 28-03-2018 IPR006549 HAD-superfamily hydrolase,subfamily IIIA Reactome: R-HSA-5649702 CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 Gene3D G3DSA:3.40.50.300 214 450 4.4E-42 T 28-03-2018 CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 Pfam PF00271 Helicase conserved C-terminal domain 230 336 3.8E-27 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 SMART SM00487 22 219 1.6E-54 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 SUPERFAMILY SSF52540 73 350 4.62E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 Hamap MF_00965 ATP-dependent RNA helicase DbpA [dbpA]. 5 457 69.357 T 28-03-2018 IPR028619 ATP-dependent RNA helicase DbpA GO:0000027|GO:0003724 CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 151 159 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 Pfam PF03880 DbpA RNA binding domain 384 454 4.7E-21 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 Pfam PF00270 DEAD/DEAH box helicase 27 191 5.1E-43 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 SMART SM00490 255 336 3.2E-29 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS13750 069e3e2c049d8013c6f1de97274a843c 457 Gene3D G3DSA:3.40.50.300 8 209 1.1E-54 T 28-03-2018 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 Gene3D G3DSA:3.40.50.1360 74 241 1.0E-41 T 28-03-2018 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 SMART SM01134 74 235 9.4E-73 T 28-03-2018 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 41 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 SUPERFAMILY SSF46785 7 65 2.66E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 SUPERFAMILY SSF100950 75 235 1.05E-34 T 28-03-2018 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 Pfam PF00455 DeoR C terminal sensor domain 76 234 1.1E-52 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 ProSitePatterns PS00141 Eukaryotic and viral aspartyl proteases active site. 97 108 - T 28-03-2018 IPR001969 Aspartic peptidase, active site GO:0004190|GO:0006508 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 Pfam PF08220 DeoR-like helix-turn-helix domain 7 61 1.9E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 SMART SM00420 7 59 2.3E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS03080 5e341004a670f59efb61344db76b6bc8 256 Gene3D G3DSA:1.10.10.10 3 61 4.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03170 cc1d91ea6653342333e074d9d38c7391 454 SUPERFAMILY SSF143548 16 158 5.75E-44 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CI104_RS03170 cc1d91ea6653342333e074d9d38c7391 454 Pfam PF03315 Serine dehydratase beta chain 3 155 2.0E-54 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CI104_RS03170 cc1d91ea6653342333e074d9d38c7391 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 7.5E-217 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CI104_RS03170 cc1d91ea6653342333e074d9d38c7391 454 Gene3D G3DSA:3.30.1330.90 11 158 9.9E-52 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CI104_RS03170 cc1d91ea6653342333e074d9d38c7391 454 Pfam PF03313 Serine dehydratase alpha chain 184 448 7.9E-96 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CI104_RS03170 cc1d91ea6653342333e074d9d38c7391 454 Gene3D G3DSA:1.10.4100.10 265 442 2.4E-33 T 28-03-2018 CI104_RS11185 498f1d0417e47f4d3cb28a8f9859dc2e 77 Gene3D G3DSA:1.10.10.10 22 73 3.1E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11185 498f1d0417e47f4d3cb28a8f9859dc2e 77 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 20 69 1.0E-13 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 ProSitePatterns PS00603 Thymidine kinase cellular-type signature. 173 186 - T 28-03-2018 IPR020633 Thymidine kinase, conserved site GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 SUPERFAMILY SSF52540 1 141 1.78E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 SUPERFAMILY SSF57716 142 191 9.27E-17 T 28-03-2018 CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 Hamap MF_00124 Thymidine kinase [tdk]. 1 189 35.347 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 Gene3D G3DSA:3.40.50.300 2 141 4.2E-45 T 28-03-2018 CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 Gene3D G3DSA:3.30.60.20 142 193 6.0E-19 T 28-03-2018 CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 Pfam PF00265 Thymidine kinase 2 186 2.2E-65 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CI104_RS14300 7fda9c4186414fb38fcd38f1cb6149af 205 PIRSF PIRSF035805 1 200 5.5E-58 T 28-03-2018 IPR001267 Thymidine kinase GO:0004797|GO:0005524 KEGG: 00240+2.7.1.21|KEGG: 00983+2.7.1.21|MetaCyc: PWY-7199|Reactome: R-HSA-539107|Reactome: R-HSA-73614 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 Gene3D G3DSA:2.160.10.10 1 196 1.7E-46 T 28-03-2018 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 20 48 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 Pfam PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 180 261 1.7E-29 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 TIGRFAM TIGR01852 lipid_A_lpxA: acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase 8 260 2.6E-113 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 Hamap MF_00387 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase [lpxA]. 5 262 49.113 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 Gene3D G3DSA:1.20.1180.10 197 262 6.3E-24 T 28-03-2018 IPR029098 Udp N-acetylglucosamine O-acyltransferase, C-terminal KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 PIRSF PIRSF000456 5 262 1.1E-108 T 28-03-2018 IPR010137 Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase GO:0008610|GO:0008780 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00540+2.3.1.129|KEGG: 00620+2.3.1.12 CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 18 52 5.1E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 143 2.1E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 SUPERFAMILY SSF51161 2 262 8.58E-82 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS05355 90266bc09d866e9f1a676637f8a9c0b9 262 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 153 181 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 TIGRFAM TIGR00096 TIGR00096: 16S rRNA (cytidine(1402)-2'-O)-methyltransferase 14 283 3.8E-114 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 Gene3D G3DSA:3.40.1010.10 11 121 1.5E-44 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 PIRSF PIRSF005917 1 286 2.0E-106 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 14 213 2.2E-28 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 Hamap MF_01877 Ribosomal RNA small subunit methyltransferase I [rsmI]. 13 234 38.103 T 28-03-2018 IPR008189 rRNA small subunit methyltransferase I GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 SUPERFAMILY SSF53790 12 232 4.45E-83 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 ProSitePatterns PS01296 RsmI AdoMet-dependent methyltransferase protein family signature. 91 102 - T 28-03-2018 IPR018063 SAM-dependent methyltransferase RsmI, conserved site GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS03005 8940488f1dfb1785ff0a3ac945ee3ba7 286 Gene3D G3DSA:3.30.950.10 122 237 7.9E-41 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS19960 df466a8392212fdfbcb3e4aeda7ddf92 107 Pfam PF12084 Protein of unknown function (DUF3561) 1 107 1.5E-48 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 CI104_RS19960 df466a8392212fdfbcb3e4aeda7ddf92 107 ProDom PD070788 MEMBRANE OXIDASE SUBUNIT CYTOCHROME YGBE INNER STY3057 TRANSMEMBRANE 23 107 1.0E-33 T 28-03-2018 IPR022721 Protein of unknown function DUF3561 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 PRINTS PR01703 Manganese superoxide dismutase signature 118 126 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 PRINTS PR01703 Manganese superoxide dismutase signature 155 167 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 PRINTS PR01703 Manganese superoxide dismutase signature 65 78 2.2E-22 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 89 189 6.6E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 157 164 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 82 1.8E-35 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 PIRSF PIRSF000349 1 193 7.6E-88 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 Gene3D G3DSA:1.10.287.990 20 82 2.4E-28 T 28-03-2018 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 SUPERFAMILY SSF46609 1 84 1.7E-36 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS12375 2133494b61ed482176341e4438e35c23 193 SUPERFAMILY SSF54719 84 192 1.96E-45 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00458 Haem peroxidase superfamily signature 259 274 3.4E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00458 Haem peroxidase superfamily signature 318 333 3.4E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00458 Haem peroxidase superfamily signature 157 174 3.4E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00458 Haem peroxidase superfamily signature 175 187 3.4E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00458 Haem peroxidase superfamily signature 97 111 3.4E-19 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 ProSitePatterns PS00435 Peroxidases proximal heme-ligand signature. 259 269 - T 28-03-2018 IPR019793 Peroxidases heam-ligand binding site Reactome: R-HSA-2408557 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Pfam PF00141 Peroxidase 403 699 1.7E-35 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Pfam PF00141 Peroxidase 91 396 5.7E-48 T 28-03-2018 IPR002016 Haem peroxidase, plant/fungal/bacterial GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Gene3D G3DSA:1.10.520.10 441 589 1.6E-30 T 28-03-2018 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 SUPERFAMILY SSF48113 29 429 1.92E-140 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 SUPERFAMILY SSF48113 435 725 1.92E-103 T 28-03-2018 IPR010255 Haem peroxidase GO:0004601|GO:0006979|GO:0020037|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Gene3D G3DSA:1.10.520.10 63 216 2.0E-35 T 28-03-2018 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 TIGRFAM TIGR00198 cat_per_HPI: catalase/peroxidase HPI 18 725 0.0 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Hamap MF_01961 Catalase-peroxidase [katG]. 11 726 39.577 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Gene3D G3DSA:1.10.420.10 590 701 1.5E-36 T 28-03-2018 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 Gene3D G3DSA:1.10.420.10 231 397 1.9E-38 T 28-03-2018 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 ProSitePatterns PS00436 Peroxidases active site signature. 97 108 - T 28-03-2018 IPR019794 Peroxidase, active site GO:0004601|GO:0055114 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 479 505 1.2E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 74 99 1.2E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 267 290 1.2E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 59 72 1.2E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS24035 d376b5205bfe12095a9273abe40ae3ef 726 PRINTS PR00460 Bacterial haem catalase-peroxidase signature 33 55 1.2E-51 T 28-03-2018 IPR000763 Catalase-peroxidase haem GO:0004096|GO:0004601|GO:0006979|GO:0020037|GO:0055114 KEGG: 00360+1.11.1.21|KEGG: 00380+1.11.1.21|KEGG: 00940+1.11.1.21|MetaCyc: PWY-5506 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 SUPERFAMILY SSF55874 720 880 6.29E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Gene3D G3DSA:3.40.50.300 22 148 3.8E-22 T 28-03-2018 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 SUPERFAMILY SSF47384 655 732 1.47E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Pfam PF13492 GAF domain 529 645 3.2E-8 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Pfam PF13493 Domain of unknown function (DUF4118) 404 508 4.7E-29 T 28-03-2018 IPR025201 Sensor protein KdpD, transmembrane domain CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Pfam PF02702 Osmosensitive K+ channel His kinase sensor domain 22 231 7.3E-97 T 28-03-2018 IPR003852 Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal GO:0000155|GO:0000160|GO:0004673|GO:0016020 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Gene3D G3DSA:3.30.450.40 501 654 6.4E-7 T 28-03-2018 IPR029016 GAF domain-like CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Gene3D G3DSA:1.10.287.130 655 714 8.0E-11 T 28-03-2018 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 SUPERFAMILY SSF52402 254 372 1.84E-7 T 28-03-2018 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 SMART SM00388 664 731 2.4E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Pfam PF00512 His Kinase A (phospho-acceptor) domain 665 731 3.7E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 811 825 2.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 829 839 2.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 868 881 2.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 PRINTS PR00344 Bacterial sensor protein C-terminal signature 844 862 2.1E-11 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Gene3D G3DSA:3.40.50.620 228 373 3.9E-12 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Gene3D G3DSA:1.20.120.620 402 500 2.6E-26 T 28-03-2018 CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 778 883 1.1E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 Gene3D G3DSA:3.30.565.10 715 889 1.6E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 SMART SM00387 774 884 8.2E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07790 b38a6a22917524e1e88ebdace08c35c6 895 SUPERFAMILY SSF55781 510 655 9.03E-5 T 28-03-2018 IPR029016 GAF domain-like CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 SMART SM00244 95 255 3.0E-43 T 28-03-2018 IPR001107 Band 7 domain CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 SUPERFAMILY SSF117892 128 259 1.27E-20 T 28-03-2018 IPR001107 Band 7 domain CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 Pfam PF12221 Bacterial membrane protein N terminal 1 59 3.5E-15 T 28-03-2018 IPR020980 Menbrane protein HflK, N-terminal CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 TIGRFAM TIGR01933 hflK: HflK protein 97 356 1.8E-125 T 28-03-2018 IPR010201 HflK GO:0016021 CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 PRINTS PR00721 Stomatin signature 184 201 1.2E-6 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 PRINTS PR00721 Stomatin signature 102 124 1.2E-6 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 PRINTS PR00721 Stomatin signature 149 170 1.2E-6 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS22525 c18997a60789d17890aa25bac50e3c48 418 Pfam PF01145 SPFH domain / Band 7 family 99 270 5.2E-31 T 28-03-2018 IPR001107 Band 7 domain CI104_RS26315 1134bccbf776c2ebea104d23c3d504dc 539 SUPERFAMILY SSF53649 265 520 2.62E-17 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS26315 1134bccbf776c2ebea104d23c3d504dc 539 Pfam PF08019 Domain of unknown function (DUF1705) 54 206 1.6E-48 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CI104_RS26315 1134bccbf776c2ebea104d23c3d504dc 539 Gene3D G3DSA:3.40.720.10 162 538 5.8E-19 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS26315 1134bccbf776c2ebea104d23c3d504dc 539 Pfam PF00884 Sulfatase 233 521 1.6E-41 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 SUPERFAMILY SSF54862 81 213 4.02E-34 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 SMART SM00926 221 275 7.0E-10 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 SUPERFAMILY SSF53706 219 688 1.28E-84 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 ProSitePatterns PS00641 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 1. 31 48 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 TIGRFAM TIGR01973 NuoG: NADH dehydrogenase (quinone), G subunit 4 655 2.7E-206 T 28-03-2018 IPR010228 NADH:ubiquinone oxidoreductase, subunit G GO:0016651|GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 221 274 8.1E-11 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Pfam PF13510 2Fe-2S iron-sulfur cluster binding domain 3 78 2.5E-11 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Gene3D G3DSA:2.20.25.90 214 280 8.8E-10 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Pfam PF01568 Molydopterin dinucleotide binding domain 828 890 1.1E-6 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 ProSitePatterns PS00643 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 3. 150 160 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 SMART SM00929 88 128 1.9E-19 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Gene3D G3DSA:2.40.40.20 824 901 1.4E-13 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Pfam PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region 88 124 1.1E-14 T 28-03-2018 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 SUPERFAMILY SSF50692 814 891 1.22E-13 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Gene3D G3DSA:3.40.50.740 281 416 2.9E-10 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Pfam PF00384 Molybdopterin oxidoreductase 563 638 1.2E-7 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 SUPERFAMILY SSF54292 1 77 7.44E-19 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 ProSitePatterns PS00642 Respiratory-chain NADH dehydrogenase 75 Kd subunit signature 2. 103 115 - T 28-03-2018 IPR000283 NADH:ubiquinone oxidoreductase, 75kDa subunit, conserved site GO:0008137|GO:0016020|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Gene3D G3DSA:3.40.50.740 461 663 2.4E-21 T 28-03-2018 CI104_RS17525 ca0b5acdb477860d8ee2fd4ea93c7b76 908 Gene3D G3DSA:3.10.20.30 1 165 1.3E-10 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS10155 25ee52f235699a5fe08ee64f4d82a3c0 198 Pfam PF03358 NADPH-dependent FMN reductase 13 143 1.6E-13 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CI104_RS10155 25ee52f235699a5fe08ee64f4d82a3c0 198 Hamap MF_01017 NAD(P)H dehydrogenase (quinone). 1 198 40.964 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CI104_RS10155 25ee52f235699a5fe08ee64f4d82a3c0 198 Gene3D G3DSA:3.40.50.360 2 198 1.0E-50 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS10155 25ee52f235699a5fe08ee64f4d82a3c0 198 SUPERFAMILY SSF52218 1 197 2.62E-62 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS10155 25ee52f235699a5fe08ee64f4d82a3c0 198 TIGRFAM TIGR01755 flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 2 196 5.7E-103 T 28-03-2018 IPR010089 Flavoprotein WrbA-like GO:0003955|GO:0010181 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CI104_RS21370 4f8416feda68b3ea3386f2ff9c25f5cf 335 Gene3D G3DSA:1.10.1530.10 4 79 4.6E-22 T 28-03-2018 CI104_RS21370 4f8416feda68b3ea3386f2ff9c25f5cf 335 SUPERFAMILY SSF89733 5 334 7.98E-99 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CI104_RS21370 4f8416feda68b3ea3386f2ff9c25f5cf 335 Gene3D G3DSA:3.30.1370.60 80 311 2.3E-79 T 28-03-2018 CI104_RS21370 4f8416feda68b3ea3386f2ff9c25f5cf 335 Pfam PF02615 Malate/L-lactate dehydrogenase 8 331 5.0E-99 T 28-03-2018 IPR003767 Malate/L-lactate dehydrogenase-like GO:0008152|GO:0016491|GO:0055114 CI104_RS03125 98ce659654e446fa533d1d2ff0cb4eb7 256 SUPERFAMILY SSF51621 4 255 9.42E-84 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS03125 98ce659654e446fa533d1d2ff0cb4eb7 256 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 20 245 3.4E-62 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CI104_RS03125 98ce659654e446fa533d1d2ff0cb4eb7 256 Gene3D G3DSA:3.20.20.60 4 255 3.8E-45 T 28-03-2018 CI104_RS03125 98ce659654e446fa533d1d2ff0cb4eb7 256 TIGRFAM TIGR03239 GarL: 2-dehydro-3-deoxyglucarate aldolase 8 256 6.6E-146 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 CI104_RS03125 98ce659654e446fa533d1d2ff0cb4eb7 256 Hamap MF_01291 5-keto-4-deoxy-D-glucarate aldolase [garL]. 1 256 69.154 T 28-03-2018 IPR017648 5-keto-4-deoxy-D-glucarate aldolase GO:0008672|GO:0019394 KEGG: 00053+4.1.2.20 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 SUPERFAMILY SSF53850 29 369 3.64E-105 T 28-03-2018 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 Gene3D G3DSA:3.40.190.10 200 333 4.5E-20 T 28-03-2018 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 Pfam PF13416 Bacterial extracellular solute-binding protein 46 335 5.4E-34 T 28-03-2018 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 Gene3D G3DSA:3.40.190.10 23 199 9.7E-34 T 28-03-2018 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 51 72 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 127 143 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 78 92 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 158 172 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 269 288 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 219 238 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 181 200 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 314 340 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 35 51 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 94 107 2.4E-75 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08710 e91f86d36672239c0407849e8e67f712 370 PIRSF PIRSF019574 1 370 6.6E-145 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 Gene3D G3DSA:3.40.50.150 2 250 1.2E-47 T 28-03-2018 CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 SUPERFAMILY SSF53335 18 249 2.32E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 Hamap MF_01813 Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE [ubiE]. 16 250 39.269 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 Pfam PF01209 ubiE/COQ5 methyltransferase family 16 250 6.7E-113 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 ProSitePatterns PS01183 ubiE/COQ5 methyltransferase family signature 1. 36 51 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 TIGRFAM TIGR01934 MenG_MenH_UbiE: ubiquinone/menaquinone biosynthesis methyltransferase 25 250 5.5E-89 T 28-03-2018 IPR004033 UbiE/COQ5 methyltransferase GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895|Reactome: R-HSA-2142789 CI104_RS24705 9ca24983915c312e0424934befe0c3ee 251 ProSitePatterns PS01184 ubiE/COQ5 methyltransferase family signature 2. 158 172 - T 28-03-2018 IPR023576 UbiE/COQ5 methyltransferase, conserved site GO:0008168 KEGG: 00130+2.1.1.163|KEGG: 00564+2.1.1.16|MetaCyc: PWY-5839|MetaCyc: PWY-5844|MetaCyc: PWY-5849|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 PIRSF PIRSF001237 4 348 2.5E-141 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 ProSitePatterns PS00483 Dihydroorotase signature 2. 249 260 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 ProSitePatterns PS00482 Dihydroorotase signature 1. 15 23 - T 28-03-2018 IPR002195 Dihydroorotase, conserved site GO:0016812 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 SUPERFAMILY SSF51556 8 346 2.04E-148 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 Pfam PF01979 Amidohydrolase family 15 307 3.3E-21 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 TIGRFAM TIGR00856 pyrC_dimer: dihydroorotase, homodimeric type 8 347 4.0E-163 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 Gene3D G3DSA:3.20.20.140 14 348 6.9E-56 T 28-03-2018 CI104_RS10365 eeba5fe14a2899f551c097ab0ab34659 348 Hamap MF_00219 Dihydroorotase [pyrC]. 6 347 61.448 T 28-03-2018 IPR004721 Dihydroorotase homodimeric type GO:0004151|GO:0019856 KEGG: 00240+3.5.2.3|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS13675 df2591c29a922efdef7337a6c34654dc 440 Gene3D G3DSA:2.60.40.1090 289 440 4.9E-14 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS13675 df2591c29a922efdef7337a6c34654dc 440 SUPERFAMILY SSF49401 287 440 3.43E-10 T 28-03-2018 IPR008966 Adhesion domain CI104_RS17425 256e088264f40b75f075d4ad88047673 111 SUPERFAMILY SSF103481 6 107 2.35E-16 T 28-03-2018 CI104_RS17425 256e088264f40b75f075d4ad88047673 111 Pfam PF00892 EamA-like transporter family 6 107 1.4E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS17425 256e088264f40b75f075d4ad88047673 111 Hamap MF_01869 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE [arnE]. 1 111 29.23 T 28-03-2018 IPR022883 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase, subunit ArnE CI104_RS13335 df627ca433ad1bf5702ea9526c663313 191 SUPERFAMILY SSF51182 56 185 1.01E-14 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS13335 df627ca433ad1bf5702ea9526c663313 191 SMART SM00530 15 70 6.1E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13335 df627ca433ad1bf5702ea9526c663313 191 Gene3D G3DSA:2.60.120.10 75 190 1.3E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS13335 df627ca433ad1bf5702ea9526c663313 191 Pfam PF01381 Helix-turn-helix 16 69 9.3E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13335 df627ca433ad1bf5702ea9526c663313 191 Gene3D G3DSA:1.10.260.40 1 74 1.1E-17 T 28-03-2018 CI104_RS13335 df627ca433ad1bf5702ea9526c663313 191 SUPERFAMILY SSF47413 8 74 4.83E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 SUPERFAMILY SSF81338 6 254 5.89E-76 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 TIGRFAM TIGR00861 MIP: MIP family channel proteins 11 249 6.7E-66 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 Pfam PF00230 Major intrinsic protein 6 249 1.7E-64 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 ProSitePatterns PS00221 MIP family signature. 64 72 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 Gene3D G3DSA:1.20.1080.10 1 257 1.4E-74 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 PRINTS PR00783 Major intrinsic protein family signature 182 204 5.7E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 PRINTS PR00783 Major intrinsic protein family signature 149 167 5.7E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 PRINTS PR00783 Major intrinsic protein family signature 46 70 5.7E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 PRINTS PR00783 Major intrinsic protein family signature 232 252 5.7E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 PRINTS PR00783 Major intrinsic protein family signature 83 102 5.7E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS16180 04a98fa7bcd88733399cc520013cbcf9 269 PRINTS PR00783 Major intrinsic protein family signature 7 26 5.7E-52 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 Hamap MF_01987 Ribokinase [rbsK]. 1 301 25.584 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 Gene3D G3DSA:3.40.1190.20 1 306 2.1E-76 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 Pfam PF00294 pfkB family carbohydrate kinase 2 294 6.9E-65 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 SUPERFAMILY SSF53613 1 302 2.65E-82 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 3 299 6.7E-113 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 PRINTS PR00990 Ribokinase signature 32 51 1.7E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 PRINTS PR00990 Ribokinase signature 5 26 1.7E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 PRINTS PR00990 Ribokinase signature 173 188 1.7E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 PRINTS PR00990 Ribokinase signature 104 117 1.7E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS00180 a45f0fb373ab33f8c35aea460e3bb91f 306 PRINTS PR00990 Ribokinase signature 217 228 1.7E-29 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS19090 86470027945e5f1a894a069acdb87f4b 400 Gene3D G3DSA:2.60.40.1310 279 346 8.2E-11 T 28-03-2018 CI104_RS19090 86470027945e5f1a894a069acdb87f4b 400 Gene3D G3DSA:2.60.40.10 193 278 2.0E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS25740 0f5f46e20394a68fe70ca1cd115285a7 337 SUPERFAMILY SSF56349 16 316 3.53E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS25740 0f5f46e20394a68fe70ca1cd115285a7 337 Gene3D G3DSA:1.10.150.130 13 97 3.5E-10 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS25740 0f5f46e20394a68fe70ca1cd115285a7 337 Gene3D G3DSA:1.10.443.10 112 318 2.9E-46 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25740 0f5f46e20394a68fe70ca1cd115285a7 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 1.4E-152 T 28-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CI104_RS25740 0f5f46e20394a68fe70ca1cd115285a7 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25740 0f5f46e20394a68fe70ca1cd115285a7 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 1.5E-23 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS23310 4930c0f9410c894fa84ba9fbacd52b3c 175 Pfam PF00436 Single-strand binding protein family 6 112 1.8E-42 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CI104_RS23310 4930c0f9410c894fa84ba9fbacd52b3c 175 Gene3D G3DSA:2.40.50.140 1 118 2.0E-46 T 28-03-2018 CI104_RS23310 4930c0f9410c894fa84ba9fbacd52b3c 175 SUPERFAMILY SSF50249 4 175 7.54E-63 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS23310 4930c0f9410c894fa84ba9fbacd52b3c 175 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 39.824 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CI104_RS23310 4930c0f9410c894fa84ba9fbacd52b3c 175 PIRSF PIRSF002070 2 157 1.2E-41 T 28-03-2018 CI104_RS23310 4930c0f9410c894fa84ba9fbacd52b3c 175 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 175 3.1E-63 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CI104_RS26070 8f31e87c3d8c40b972aa492337779a18 353 Gene3D G3DSA:3.40.1800.10 270 326 4.7E-4 T 28-03-2018 CI104_RS26070 8f31e87c3d8c40b972aa492337779a18 353 PIRSF PIRSF011452 1 350 1.9E-173 T 28-03-2018 IPR016583 Uncharacterised conserved protein UCP011452, HNH endonuclease domain-type CI104_RS26070 8f31e87c3d8c40b972aa492337779a18 353 SUPERFAMILY SSF54060 213 315 1.29E-23 T 28-03-2018 CI104_RS26070 8f31e87c3d8c40b972aa492337779a18 353 Pfam PF01844 HNH endonuclease 287 311 6.1E-5 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CI104_RS19805 bfdac7d338bf248146d9a1e09d1a3210 255 Gene3D G3DSA:3.40.50.700 21 181 1.3E-26 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19805 bfdac7d338bf248146d9a1e09d1a3210 255 SUPERFAMILY SSF56770 36 168 6.15E-50 T 28-03-2018 CI104_RS19805 bfdac7d338bf248146d9a1e09d1a3210 255 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 48 157 2.7E-23 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19805 bfdac7d338bf248146d9a1e09d1a3210 255 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 131 147 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 SMART SM00448 4 115 8.6E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 SUPERFAMILY SSF46689 380 469 1.68E-24 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Gene3D G3DSA:3.40.50.300 136 312 1.8E-28 T 28-03-2018 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Gene3D G3DSA:1.10.10.60 383 469 1.1E-26 T 28-03-2018 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 432 449 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 449 469 8.0E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 353 362 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Gene3D G3DSA:1.10.8.60 313 382 2.6E-22 T 28-03-2018 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 SUPERFAMILY SSF52172 6 185 2.42E-47 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 SMART SM00382 160 311 7.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Pfam PF00072 Response regulator receiver domain 6 115 3.8E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 SUPERFAMILY SSF52540 139 383 5.51E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 TIGRFAM TIGR01818 ntrC: nitrogen regulation protein NR(I) 6 466 9.4E-247 T 28-03-2018 IPR010114 Signal transduction response regulator, nitrogen regulation NR(I) GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0006808 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Gene3D G3DSA:3.40.50.2300 2 135 5.9E-37 T 28-03-2018 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 164 177 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 226 241 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Pfam PF02954 Bacterial regulatory protein, Fis family 427 466 1.7E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS24540 978df6ca4261f07ad6e4a6a52210bb52 469 Pfam PF00158 Sigma-54 interaction domain 140 306 9.4E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Gene3D G3DSA:2.40.40.20 537 688 1.3E-37 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 PIRSF PIRSF000144 53 440 6.1E-56 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 PIRSF PIRSF000144 535 693 2.2 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 TIGRFAM TIGR01591 Fdh-alpha: formate dehydrogenase, alpha subunit 7 686 6.8E-275 T 28-03-2018 IPR006478 Formate dehydrogenase, alpha subunit GO:0008863|GO:0015942|GO:0055114 KEGG: 00630+1.2.1.2|KEGG: 00680+1.2.1.2|MetaCyc: PWY-1881|MetaCyc: PWY-5497|MetaCyc: PWY-6696 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 1 53 1.8E-12 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 616 643 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Gene3D G3DSA:3.40.228.10 168 256 1.3E-24 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Gene3D G3DSA:1.20.5.460 691 713 1.2E-8 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Gene3D G3DSA:2.20.25.90 1 55 1.2E-15 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Gene3D G3DSA:3.40.50.740 61 167 4.3E-25 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Pfam PF01568 Molydopterin dinucleotide binding domain 576 683 1.5E-27 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Pfam PF00384 Molybdopterin oxidoreductase 61 488 1.2E-87 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 SUPERFAMILY SSF53706 1 564 7.07E-193 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 435 452 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 Gene3D G3DSA:3.40.50.740 257 536 7.0E-80 T 28-03-2018 CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 SUPERFAMILY SSF50692 542 688 2.94E-42 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS11530 12bb90a4156998c804710265bb32e40d 715 SMART SM00926 1 54 1.0E-14 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 SMART SM00382 30 220 2.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 SMART SM00382 281 484 2.9E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 SUPERFAMILY SSF52540 5 230 1.16E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 Gene3D G3DSA:3.40.50.300 1 235 7.7E-52 T 28-03-2018 CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 Gene3D G3DSA:3.40.50.300 254 499 1.6E-40 T 28-03-2018 CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 Pfam PF00005 ABC transporter 21 172 1.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 Pfam PF00005 ABC transporter 272 427 1.3E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 SUPERFAMILY SSF52540 262 488 3.17E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20155 27645af89dbee1d196c5bcab6feee0e3 499 ProSitePatterns PS00211 ABC transporters family signature. 400 414 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS03940 ac337d1294704c894d2a92f94262a758 387 Gene3D G3DSA:1.20.1090.10 184 387 6.6E-42 T 28-03-2018 CI104_RS03940 ac337d1294704c894d2a92f94262a758 387 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS03940 ac337d1294704c894d2a92f94262a758 387 Gene3D G3DSA:3.40.50.1970 9 183 4.5E-43 T 28-03-2018 CI104_RS03940 ac337d1294704c894d2a92f94262a758 387 SUPERFAMILY SSF56796 1 386 4.84E-107 T 28-03-2018 CI104_RS03940 ac337d1294704c894d2a92f94262a758 387 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 264 284 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS03940 ac337d1294704c894d2a92f94262a758 387 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 359 1.0E-91 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF00189 Ribosomal protein S3, C-terminal domain 120 202 2.1E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 TIGRFAM TIGR01009 rpsC_bact: ribosomal protein uS3 1 209 2.6E-100 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 Pfam PF07650 KH domain 38 111 1.1E-18 T 28-03-2018 IPR004044 K Homology domain, type 2 GO:0003723 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.300.20 17 107 9.1E-28 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54814 2 106 1.6E-37 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 SMART SM00322 60 125 1.6E-6 T 28-03-2018 IPR004087 K Homology domain GO:0003676 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 Hamap MF_01309_B 30S ribosomal protein S3 [rpsC]. 1 206 39.15 T 28-03-2018 IPR005704 Ribosomal protein S3, bacterial GO:0003735|GO:0006412|GO:0015935 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 ProSitePatterns PS00548 Ribosomal protein S3 signature. 163 197 - T 28-03-2018 IPR018280 Ribosomal protein S3, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 Gene3D G3DSA:3.30.1140.32 108 207 3.4E-40 T 28-03-2018 CI104_RS02075 015d00c9b7f7f2897a9ebd700c9a9d69 233 SUPERFAMILY SSF54821 108 206 6.93E-41 T 28-03-2018 IPR001351 Ribosomal protein S3, C-terminal GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Gene3D G3DSA:1.10.1040.10 212 287 1.3E-27 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Gene3D G3DSA:3.40.50.720 1 193 1.4E-49 T 28-03-2018 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 SUPERFAMILY SSF48179 191 287 2.55E-30 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 PIRSF PIRSF500134 1 344 1.4E-119 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 PIRSF PIRSF500134 338 388 0.0032 T 28-03-2018 IPR028357 UDP-glucose 6-dehydrogenase, bacterial type GO:0000271|GO:0003979 KEGG: 00040+1.1.1.22|KEGG: 00053+1.1.1.22|KEGG: 00520+1.1.1.22|MetaCyc: PWY-7346|MetaCyc: PWY-7820 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 SUPERFAMILY SSF51735 1 194 3.67E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 PIRSF PIRSF000124 1 388 6.8E-140 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Gene3D G3DSA:1.20.5.100 194 211 4.9E-14 T 28-03-2018 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 1 169 5.4E-32 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 1 378 1.0E-102 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 SMART SM00984 300 387 5.1E-12 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 301 376 5.6E-8 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Gene3D G3DSA:3.40.50.720 288 388 6.7E-17 T 28-03-2018 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 SUPERFAMILY SSF52413 283 387 3.92E-28 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS16390 5ad14a8b953da4586f038221678155f5 388 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 192 281 2.1E-27 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS08240 349dfbcdd94c1ebd4c187af6f0f12392 313 Pfam PF00491 Arginase family 45 308 1.5E-52 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CI104_RS08240 349dfbcdd94c1ebd4c187af6f0f12392 313 TIGRFAM TIGR01227 hutG: formimidoylglutamase 12 308 9.6E-84 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 CI104_RS08240 349dfbcdd94c1ebd4c187af6f0f12392 313 Hamap MF_00737 Formimidoylglutamase [hutG]. 7 310 41.704 T 28-03-2018 IPR005923 Formiminoglutamase GO:0019556|GO:0050415 KEGG: 00340+3.5.3.8 CI104_RS08240 349dfbcdd94c1ebd4c187af6f0f12392 313 Gene3D G3DSA:3.40.800.10 2 313 4.7E-74 T 28-03-2018 CI104_RS08240 349dfbcdd94c1ebd4c187af6f0f12392 313 SUPERFAMILY SSF52768 11 312 1.19E-73 T 28-03-2018 CI104_RS08240 349dfbcdd94c1ebd4c187af6f0f12392 313 PIRSF PIRSF036979 21 312 6.8E-26 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Gene3D G3DSA:2.40.50.140 1 92 1.5E-7 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SUPERFAMILY SSF50249 429 535 2.29E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS09045 86f27741928648083af90c2fa111b927 557 PIRSF PIRSF002111 1 534 1.4E-220 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 155 175 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 330 348 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 21 39 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 126 143 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 212 233 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 290 309 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 39 53 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 108 124 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 PRINTS PR00681 Ribosomal protein S1 signature 84 103 2.3E-99 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Pfam PF00575 S1 RNA binding domain 104 171 8.3E-10 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Pfam PF00575 S1 RNA binding domain 275 347 2.7E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Pfam PF00575 S1 RNA binding domain 449 520 7.4E-17 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Pfam PF00575 S1 RNA binding domain 190 260 2.4E-21 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Pfam PF00575 S1 RNA binding domain 361 434 9.5E-22 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Pfam PF00575 S1 RNA binding domain 20 78 2.1E-6 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS09045 86f27741928648083af90c2fa111b927 557 TIGRFAM TIGR00717 rpsA: ribosomal protein bS1 3 520 2.2E-240 T 28-03-2018 IPR000110 Ribosomal protein S1 GO:0003723|GO:0003735|GO:0005840|GO:0006412 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Gene3D G3DSA:2.40.50.140 182 266 2.5E-26 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SUPERFAMILY SSF50249 255 367 1.0E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS09045 86f27741928648083af90c2fa111b927 557 Gene3D G3DSA:2.40.50.140 361 435 2.3E-20 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Gene3D G3DSA:2.40.50.140 274 348 2.5E-27 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SUPERFAMILY SSF50249 189 277 3.88E-27 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS09045 86f27741928648083af90c2fa111b927 557 SUPERFAMILY SSF50249 1 112 2.06E-18 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS09045 86f27741928648083af90c2fa111b927 557 SUPERFAMILY SSF50249 106 185 3.28E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS09045 86f27741928648083af90c2fa111b927 557 Gene3D G3DSA:2.40.50.140 451 550 2.8E-19 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 Gene3D G3DSA:2.40.50.140 105 178 2.7E-7 T 28-03-2018 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SMART SM00316 190 260 2.8E-28 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SMART SM00316 19 87 1.2E-4 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SMART SM00316 275 347 2.2E-27 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SMART SM00316 362 434 3.4E-21 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SMART SM00316 103 171 2.0E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SMART SM00316 449 520 1.0E-20 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS09045 86f27741928648083af90c2fa111b927 557 SUPERFAMILY SSF50249 347 439 5.67E-21 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 SMART SM00862 156 232 4.5E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 SMART SM00448 11 121 4.3E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 Gene3D G3DSA:3.40.50.2300 4 131 9.4E-34 T 28-03-2018 CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 Pfam PF00486 Transcriptional regulatory protein, C terminal 159 231 1.6E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 Gene3D G3DSA:1.10.10.10 132 239 1.6E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 SUPERFAMILY SSF46894 142 234 5.67E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 SUPERFAMILY SSF52172 6 138 5.69E-39 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS16630 7c27f231923f833d7dd4275d7fd61f26 240 Pfam PF00072 Response regulator receiver domain 13 121 4.0E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 Gene3D G3DSA:1.10.1740.10 312 396 1.1E-30 T 28-03-2018 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 SUPERFAMILY SSF69055 301 394 2.35E-31 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 Pfam PF13288 DXP reductoisomerase C-terminal domain 271 387 7.5E-42 T 28-03-2018 IPR026877 DXP reductoisomerase C-terminal domain KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 SUPERFAMILY SSF55347 126 274 7.85E-62 T 28-03-2018 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 Gene3D G3DSA:3.40.50.720 1 150 1.9E-53 T 28-03-2018 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 Pfam PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase 4 132 8.4E-49 T 28-03-2018 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal GO:0055114|GO:0070402 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 TIGRFAM TIGR00243 Dxr: 1-deoxy-D-xylulose 5-phosphate reductoisomerase 1 397 1.6E-191 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 SUPERFAMILY SSF51735 2 150 4.66E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS05315 deaad8d96862303ea855afd189459b31 398 Hamap MF_00183 1-deoxy-D-xylulose 5-phosphate reductoisomerase [dxr]. 4 392 47.119 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 PIRSF PIRSF006205 1 398 3.5E-158 T 28-03-2018 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase GO:0008299|GO:0030604|GO:0046872|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS05315 deaad8d96862303ea855afd189459b31 398 Pfam PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal 146 239 9.9E-36 T 28-03-2018 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal GO:0005515 KEGG: 00630+1.1.1.26|KEGG: 00900+1.1.1.267|MetaCyc: PWY-7294|MetaCyc: PWY-7295|MetaCyc: PWY-7560 CI104_RS22790 db4e498bdf0abb335353ab4781d7c88d 186 SUPERFAMILY SSF49401 44 185 3.78E-30 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22790 db4e498bdf0abb335353ab4781d7c88d 186 Gene3D G3DSA:2.60.40.1090 42 185 1.1E-21 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 231 1.1E-25 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 ProSitePatterns PS01228 Hypothetical cof family signature 1. 4 15 - T 28-03-2018 CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 Gene3D G3DSA:3.40.50.1000 2 266 4.1E-36 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 4 260 9.8E-68 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 Pfam PF08282 haloacid dehalogenase-like hydrolase 5 260 1.2E-59 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 SUPERFAMILY SSF56784 1 265 1.0E-66 T 28-03-2018 IPR023214 HAD-like domain CI104_RS24740 464c5edbbb771836684eb1f05792dd08 266 ProSitePatterns PS01229 Hypothetical cof family signature 2. 212 234 - T 28-03-2018 CI104_RS07500 f576413b8758635c82045704f5c08c92 317 Gene3D G3DSA:3.40.190.10 203 285 1.1E-8 T 28-03-2018 CI104_RS07500 f576413b8758635c82045704f5c08c92 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 31 89 1.8E-14 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS07500 f576413b8758635c82045704f5c08c92 317 Gene3D G3DSA:3.40.190.10 117 202 1.1E-9 T 28-03-2018 CI104_RS07500 f576413b8758635c82045704f5c08c92 317 SUPERFAMILY SSF53850 116 315 6.52E-24 T 28-03-2018 CI104_RS07500 f576413b8758635c82045704f5c08c92 317 Gene3D G3DSA:1.10.10.10 17 112 3.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07500 f576413b8758635c82045704f5c08c92 317 SUPERFAMILY SSF46785 26 107 1.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07500 f576413b8758635c82045704f5c08c92 317 Pfam PF03466 LysR substrate binding domain 116 316 2.3E-16 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS21320 f96877b42e3660aafb8391b3490d0b42 245 Gene3D G3DSA:3.40.50.300 48 225 1.8E-19 T 28-03-2018 CI104_RS21320 f96877b42e3660aafb8391b3490d0b42 245 Pfam PF01695 IstB-like ATP binding protein 93 218 2.2E-17 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CI104_RS21320 f96877b42e3660aafb8391b3490d0b42 245 SUPERFAMILY SSF52540 64 223 8.38E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21320 f96877b42e3660aafb8391b3490d0b42 245 PIRSF PIRSF003073 2 245 1.0E-34 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CI104_RS21320 f96877b42e3660aafb8391b3490d0b42 245 SMART SM00382 98 227 5.3E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS22140 daf052d0ecbc83f6e167f31297a64dc9 154 PIRSF PIRSF000368 1 154 1.1E-60 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CI104_RS22140 daf052d0ecbc83f6e167f31297a64dc9 154 TIGRFAM TIGR02491 NrdG: anaerobic ribonucleoside-triphosphate reductase activating protein 2 153 4.3E-65 T 28-03-2018 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic GO:0005737|GO:0043365|GO:0051539|GO:0055114 CI104_RS22140 daf052d0ecbc83f6e167f31297a64dc9 154 SUPERFAMILY SSF102114 24 105 3.4E-6 T 28-03-2018 CI104_RS22140 daf052d0ecbc83f6e167f31297a64dc9 154 Gene3D G3DSA:3.20.20.70 12 129 1.6E-10 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS22140 daf052d0ecbc83f6e167f31297a64dc9 154 ProSitePatterns PS01087 Radical activating enzymes signature. 14 35 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CI104_RS22140 daf052d0ecbc83f6e167f31297a64dc9 154 Pfam PF13353 4Fe-4S single cluster domain 12 151 3.1E-51 T 28-03-2018 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 333 483 1.9E-47 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 SMART SM00304 216 268 1.5E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 SUPERFAMILY SSF58104 236 517 8.24E-69 T 28-03-2018 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 2.5E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 2.5E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 2.5E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 2.5E-48 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 Pfam PF00672 HAMP domain 216 264 1.1E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 Pfam PF12729 Four helix bundle sensory module for signal transduction 9 184 4.4E-13 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 SMART SM00283 269 516 1.9E-83 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 Gene3D G3DSA:1.10.287.950 322 520 5.3E-47 T 28-03-2018 CI104_RS14525 fbd787cdbe3a4ff5f8b112bf75b90ad5 561 Gene3D G3DSA:1.10.287.950 82 321 1.4E-16 T 28-03-2018 CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 SUPERFAMILY SSF101801 54 135 4.32E-27 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 56 126 3.5E-26 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 102 117 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 56 72 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 73 89 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 PRINTS PR00956 Flagellar motor switch protein FliN signature 89 102 1.8E-30 T 28-03-2018 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb GO:0003774|GO:0006935|GO:0009425|GO:0071973 CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 TIGRFAM TIGR02480 fliN: flagellar motor switch protein FliN 53 128 8.6E-34 T 28-03-2018 IPR012826 Flagellar motor switch FliN GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 Gene3D G3DSA:2.30.330.10 43 137 8.4E-31 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CI104_RS15885 28b586bf1d6e110d2eaed6efa6ca79bf 137 Pfam PF16973 Flagellar motor switch protein FliN N-terminal 1 49 7.6E-20 T 28-03-2018 IPR031576 Flagellar motor switch protein FliN, N-terminal CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 SUPERFAMILY SSF81923 12 124 3.34E-19 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 238 350 9.2E-9 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Gene3D G3DSA:1.10.8.60 379 560 4.4E-39 T 28-03-2018 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 781 857 1.9E-12 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Gene3D G3DSA:3.40.50.300 192 377 3.1E-22 T 28-03-2018 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 SUPERFAMILY SSF52540 559 852 2.63E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 SMART SM01086 781 874 3.6E-9 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Gene3D G3DSA:1.10.8.60 787 882 1.9E-11 T 28-03-2018 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 659 677 9.4E-32 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 688 706 9.4E-32 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 614 632 9.4E-32 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 721 735 9.4E-32 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 SMART SM00382 233 378 3.8E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 SMART SM00382 610 783 5.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 329 341 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Gene3D G3DSA:3.40.50.300 565 786 6.9E-35 T 28-03-2018 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Gene3D G3DSA:1.10.1780.10 1 159 3.2E-31 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Pfam PF07724 AAA domain (Cdc48 subfamily) 610 775 7.8E-38 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 11 862 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 SUPERFAMILY SSF52540 194 536 1.24E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09695 0d85d684fe32a9ae393975c4541e8a57 883 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 22 52 0.033 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 PIRSF PIRSF500064 2 806 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 PIRSF PIRSF000437 19 806 0.0 T 28-03-2018 IPR022284 Glycerol-3-phosphate O-acyltransferase/Dihydroxyacetone phosphate acyltransferase GO:0008374|GO:0044255 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 Gene3D G3DSA:3.40.1130.10 236 492 1.3E-34 T 28-03-2018 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 Hamap MF_00393 Glycerol-3-phosphate acyltransferase [plsB]. 13 806 33.432 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 TIGRFAM TIGR03703 plsB: glycerol-3-phosphate O-acyltransferase 11 799 0.0 T 28-03-2018 IPR028354 Glycerol-3-phosphate acyltransferase, PlsB GO:0004366|GO:0005886|GO:0008654 KEGG: 00561+2.3.1.15|KEGG: 00564+2.3.1.15|MetaCyc: PWY-5667|MetaCyc: PWY-6453|MetaCyc: PWY-7411|MetaCyc: PWY-7587|Reactome: R-HSA-1483166|Reactome: R-HSA-2426168|Reactome: R-HSA-75109 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 SUPERFAMILY SSF69593 246 487 1.22E-23 T 28-03-2018 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 SMART SM00563 300 427 7.8E-28 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS23390 b95a0380b0bb27dd1667b68494118f51 806 Pfam PF01553 Acyltransferase 282 424 3.9E-26 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 Pfam PF00701 Dihydrodipicolinate synthetase family 6 298 2.5E-70 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 Gene3D G3DSA:3.20.20.70 1 301 1.3E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 138 169 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 6.9E-16 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 76 94 6.9E-16 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 133 150 6.9E-16 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 PRINTS PR00146 Dihydrodipicolinate synthase signature 108 124 6.9E-16 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 SUPERFAMILY SSF51569 2 301 2.62E-81 T 28-03-2018 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 SMART SM01130 6 300 1.3E-95 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 PIRSF PIRSF001365 2 301 6.8E-80 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS01575 c278e6c3326afa6770d981c3af6bad67 301 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 43 60 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 SUPERFAMILY SSF53850 1 242 1.21E-72 T 28-03-2018 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 SMART SM00079 22 243 6.3E-5 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 2 241 2.3E-92 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 SMART SM00062 22 243 1.4E-86 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 Gene3D G3DSA:3.40.190.10 138 243 3.4E-18 T 28-03-2018 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 Gene3D G3DSA:3.40.190.10 14 137 7.4E-37 T 28-03-2018 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS08755 5b771387e1d9c69ec001e39d07a4dc20 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 7.5E-68 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS13150 9390b3e4933b28c1b0d8d95355f7a7a1 293 SUPERFAMILY SSF103481 190 291 1.96E-6 T 28-03-2018 CI104_RS13150 9390b3e4933b28c1b0d8d95355f7a7a1 293 SUPERFAMILY SSF103481 53 139 6.8E-5 T 28-03-2018 CI104_RS13150 9390b3e4933b28c1b0d8d95355f7a7a1 293 Pfam PF00892 EamA-like transporter family 158 285 2.3E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 Gene3D G3DSA:3.40.50.720 10 301 2.0E-78 T 28-03-2018 CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 228 245 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 181 197 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 59 76 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 226 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 135 146 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 263 283 1.2E-35 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 146 3.9E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 207 226 3.9E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 187 195 3.9E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 194 222 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 SUPERFAMILY SSF51735 57 298 3.89E-79 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS23575 0418d758f5b79fd0cca718083f60bf96 302 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 67 298 2.7E-59 T 28-03-2018 CI104_RS11130 482a78e5a95267713c65181f81b9fa1f 172 Pfam PF10721 Protein of unknown function (DUF2514) 4 162 3.0E-43 T 28-03-2018 IPR019659 Protein of unknown function DUF2514 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 Hamap MF_00739 Urease subunit gamma [ureA]. 1 100 34.671 T 28-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 PIRSF PIRSF001223 1 100 3.4E-50 T 28-03-2018 IPR012010 Urease, gamma subunit GO:0009039|GO:0019627 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 ProDom PD002319 SUBUNIT GAMMA HYDROLASE UREASE UREA AMIDOHYDROLASE UREASE ALPHA GAMMA/BETA METAL-BINDING 9 99 4.0E-45 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 TIGRFAM TIGR00193 urease_gam: urease, gamma subunit 1 99 3.3E-50 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 Gene3D G3DSA:3.30.280.10 2 99 1.2E-46 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 SUPERFAMILY SSF54111 1 99 4.71E-45 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03710 fa1bf8bf49c02bc67c1df1c9133c514d 100 Pfam PF00547 Urease, gamma subunit 1 99 3.5E-46 T 28-03-2018 IPR002026 Urease, gamma/gamma-beta subunit GO:0016151|GO:0043419 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 SUPERFAMILY SSF54211 1 181 5.57E-46 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 Pfam PF03725 3' exoribonuclease family, domain 2 157 222 5.0E-12 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 Hamap MF_00564 Ribonuclease PH [rph]. 1 237 49.725 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 SUPERFAMILY SSF55666 153 237 3.93E-26 T 28-03-2018 IPR015847 Exoribonuclease, phosphorolytic domain 2 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 TIGRFAM TIGR01966 RNasePH: ribonuclease PH 2 236 2.2E-114 T 28-03-2018 IPR002381 Ribonuclease PH, bacterial-type GO:0000049|GO:0008033|GO:0009022 CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 Gene3D G3DSA:3.30.230.70 1 238 6.3E-62 T 28-03-2018 IPR027408 PNPase/RNase PH domain Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 ProSitePatterns PS01277 Ribonuclease PH signature. 116 128 - T 28-03-2018 IPR018336 Ribonuclease PH, conserved site CI104_RS00490 e32fcdaa4282c4ecf2b56d25514ab5fc 238 Pfam PF01138 3' exoribonuclease family, domain 1 10 140 1.4E-24 T 28-03-2018 IPR001247 Exoribonuclease, phosphorolytic domain 1 Reactome: R-HSA-380994|Reactome: R-HSA-429958|Reactome: R-HSA-450385|Reactome: R-HSA-450513|Reactome: R-HSA-450604|Reactome: R-HSA-6791226 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 SUPERFAMILY SSF53850 96 294 2.71E-30 T 28-03-2018 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 1.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 1.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 1.8E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 2.6E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 SUPERFAMILY SSF46785 5 83 2.23E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 Pfam PF03466 LysR substrate binding domain 96 293 2.3E-28 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 Gene3D G3DSA:3.40.190.10 179 266 3.4E-16 T 28-03-2018 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 Gene3D G3DSA:3.40.190.10 96 178 3.1E-9 T 28-03-2018 CI104_RS07980 ed296de9ed5b16a66330e37fd83ddeb2 302 Gene3D G3DSA:1.10.10.10 7 88 1.5E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21665 c826b16460a4cea53476de4c34062669 459 Pfam PF13347 MFS/sugar transport protein 10 428 4.3E-103 T 28-03-2018 CI104_RS21665 c826b16460a4cea53476de4c34062669 459 Gene3D G3DSA:1.20.1250.20 9 209 6.7E-18 T 28-03-2018 CI104_RS21665 c826b16460a4cea53476de4c34062669 459 SUPERFAMILY SSF103473 10 428 8.37E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS21665 c826b16460a4cea53476de4c34062669 459 Gene3D G3DSA:1.20.1250.20 210 452 2.1E-14 T 28-03-2018 CI104_RS21665 c826b16460a4cea53476de4c34062669 459 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 441 1.5E-152 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS21665 c826b16460a4cea53476de4c34062669 459 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 ProSitePatterns PS00217 Sugar transport proteins signature 2. 128 153 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 ProSitePatterns PS00216 Sugar transport proteins signature 1. 297 313 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 SUPERFAMILY SSF103473 12 428 8.37E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 Gene3D G3DSA:1.20.1250.20 235 438 1.9E-21 T 28-03-2018 CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 Gene3D G3DSA:1.20.1250.20 2 217 1.3E-23 T 28-03-2018 CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 Pfam PF07690 Major Facilitator Superfamily 255 430 6.7E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13615 7f07653cfecbd38d1ad552762094a595 439 Pfam PF00083 Sugar (and other) transporter 17 229 2.5E-25 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 SUPERFAMILY SSF50249 4 69 5.9E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 SMART SM00357 6 70 1.6E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 1.4E-32 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 Gene3D G3DSA:2.40.50.140 4 70 2.0E-28 T 28-03-2018 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 28-03-2018 IPR019844 Cold-shock conserved site CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 PRINTS PR00050 Cold shock protein signature 7 22 5.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 PRINTS PR00050 Cold shock protein signature 28 37 5.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 PRINTS PR00050 Cold shock protein signature 43 61 5.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS00875 68c963bca8da55c13e705fb9111912b4 70 PIRSF PIRSF002599 1 70 4.0E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 SMART SM00847 388 476 1.3E-8 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 Gene3D G3DSA:3.40.50.300 180 349 1.6E-41 T 28-03-2018 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 Pfam PF04408 Helicase associated domain (HA2) 389 444 3.0E-9 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 Pfam PF00271 Helicase conserved C-terminal domain 203 327 7.0E-11 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 Pfam PF08482 ATP-dependent helicase C-terminal 664 796 3.0E-52 T 28-03-2018 IPR013689 ATP-dependent RNA helicase HrpB, C-terminal CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 TIGRFAM TIGR01970 DEAH_box_HrpB: ATP-dependent helicase HrpB 4 808 0.0 T 28-03-2018 IPR010225 ATP-dependent helicase HrpB GO:0008026 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 PIRSF PIRSF005496 1 809 0.0 T 28-03-2018 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 SMART SM00487 2 186 2.2E-18 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 Pfam PF00270 DEAD/DEAH box helicase 19 162 1.0E-9 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 SMART SM00490 226 328 4.6E-12 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 SUPERFAMILY SSF52540 12 430 1.68E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05190 04009f479a2e52b934e23a490d9bf9b6 809 Gene3D G3DSA:3.40.50.300 3 162 6.4E-23 T 28-03-2018 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 Hamap MF_01416 ATP synthase subunit delta [atpD]. 3 177 18.787 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 SUPERFAMILY SSF47928 3 105 3.14E-28 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 Pfam PF00213 ATP synthase delta (OSCP) subunit 7 174 1.8E-51 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 PRINTS PR00125 ATP synthase delta subunit signature 74 85 3.4E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 PRINTS PR00125 ATP synthase delta subunit signature 7 26 3.4E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 PRINTS PR00125 ATP synthase delta subunit signature 150 168 3.4E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 PRINTS PR00125 ATP synthase delta subunit signature 85 99 3.4E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 PRINTS PR00125 ATP synthase delta subunit signature 135 150 3.4E-28 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 ProSitePatterns PS00389 ATP synthase delta (OSCP) subunit signature. 137 156 - T 28-03-2018 IPR020781 ATPase, OSCP/delta subunit, conserved site GO:0015986|GO:0016020|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 Gene3D G3DSA:1.10.520.20 2 106 6.2E-28 T 28-03-2018 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25170 785b8e6067ff12b41fae97840c6361bb 177 TIGRFAM TIGR01145 ATP_synt_delta: ATP synthase F1, delta subunit 7 175 8.8E-66 T 28-03-2018 IPR000711 ATPase, OSCP/delta subunit GO:0015986|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS01085 6c5d1de0b6b66b333c99968d5a1a3002 497 Gene3D G3DSA:3.30.830.10 16 250 2.3E-25 T 28-03-2018 CI104_RS01085 6c5d1de0b6b66b333c99968d5a1a3002 497 Pfam PF00675 Insulinase (Peptidase family M16) 50 158 6.5E-7 T 28-03-2018 IPR011765 Peptidase M16, N-terminal CI104_RS01085 6c5d1de0b6b66b333c99968d5a1a3002 497 Gene3D G3DSA:3.30.830.10 256 471 2.6E-25 T 28-03-2018 CI104_RS01085 6c5d1de0b6b66b333c99968d5a1a3002 497 SUPERFAMILY SSF63411 322 461 2.79E-6 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS01085 6c5d1de0b6b66b333c99968d5a1a3002 497 Pfam PF05193 Peptidase M16 inactive domain 201 377 2.1E-16 T 28-03-2018 IPR007863 Peptidase M16, C-terminal CI104_RS01085 6c5d1de0b6b66b333c99968d5a1a3002 497 SUPERFAMILY SSF63411 29 239 3.84E-23 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS02615 9547fb6030d060fa11239545cd54ed13 291 Gene3D G3DSA:3.30.420.40 116 289 1.9E-45 T 28-03-2018 CI104_RS02615 9547fb6030d060fa11239545cd54ed13 291 Gene3D G3DSA:3.30.420.40 1 115 2.9E-21 T 28-03-2018 CI104_RS02615 9547fb6030d060fa11239545cd54ed13 291 Hamap MF_01234 N-acetylmannosamine kinase [nanK]. 1 290 45.884 T 28-03-2018 IPR023945 N-acetylmannosamine kinase, bacterial GO:0005524|GO:0008270|GO:0009384|GO:0019262 KEGG: 00520+2.7.1.60|MetaCyc: PWY-6138 CI104_RS02615 9547fb6030d060fa11239545cd54ed13 291 Pfam PF00480 ROK family 4 288 1.2E-85 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS02615 9547fb6030d060fa11239545cd54ed13 291 ProSitePatterns PS01125 ROK family signature. 129 156 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS02615 9547fb6030d060fa11239545cd54ed13 291 SUPERFAMILY SSF53067 1 287 9.84E-54 T 28-03-2018 CI104_RS17790 0191a9bf6f20039490837c424d26f90c 91 Gene3D G3DSA:1.10.357.10 2 91 3.0E-4 T 28-03-2018 CI104_RS17790 0191a9bf6f20039490837c424d26f90c 91 Pfam PF08891 YfcL protein 4 87 2.8E-34 T 28-03-2018 IPR014987 Uncharacterised protein family YfcL CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 74 164 8.6E-6 T 28-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 Pfam PF03104 DNA polymerase family B, exonuclease domain 197 296 5.1E-7 T 28-03-2018 IPR006133 DNA-directed DNA polymerase, family B, exonuclease domain GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 Pfam PF00136 DNA polymerase family B 382 735 3.0E-40 T 28-03-2018 IPR006134 DNA-directed DNA polymerase, family B, multifunctional domain GO:0000166|GO:0003677 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 ProSitePatterns PS00116 DNA polymerase family B signature. 543 551 - T 28-03-2018 IPR017964 DNA-directed DNA polymerase, family B, conserved site GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 SUPERFAMILY SSF53098 3 389 4.05E-95 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 Gene3D G3DSA:3.90.1600.10 404 636 4.3E-50 T 28-03-2018 IPR023211 DNA polymerase, palm domain KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 415 428 7.0E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 489 501 7.0E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 PRINTS PR00106 DNA-directed DNA-polymerase family B signature 541 549 7.0E-10 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 Gene3D G3DSA:3.30.420.10 151 347 1.2E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 SMART SM00486 148 555 2.5E-77 T 28-03-2018 IPR006172 DNA-directed DNA polymerase, family B GO:0000166|GO:0003676|GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS04755 f48b98ef2d2882d8707a79839cd88a2d 783 SUPERFAMILY SSF56672 385 777 1.56E-112 T 28-03-2018 CI104_RS17040 86a3c58e87406f214fb4bebbb5d6f5f6 114 ProDom PD073777 YEJG CYTOPLASMIC SIMILAR Y2914 YPO1269 STY2456 ECS3073 ESCHERICHIA COLI 1 114 1.0E-59 T 28-03-2018 IPR020489 Uncharacterised protein family YejG CI104_RS17040 86a3c58e87406f214fb4bebbb5d6f5f6 114 Pfam PF13989 YejG-like protein 4 108 2.8E-50 T 28-03-2018 IPR020489 Uncharacterised protein family YejG CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 SUPERFAMILY SSF56059 1 238 1.06E-81 T 28-03-2018 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 ProSitePatterns PS01217 ATP-citrate lyase / succinyl-CoA ligases family signature 3. 257 282 - T 28-03-2018 IPR017866 Succinyl-CoA synthetase, beta subunit, conserved site KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 Pfam PF00549 CoA-ligase 262 382 1.1E-24 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 Pfam PF08442 ATP-grasp domain 2 203 1.6E-83 T 28-03-2018 IPR013650 ATP-grasp fold, succinyl-CoA synthetase-type KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 PIRSF PIRSF001554 1 388 1.2E-154 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 Gene3D G3DSA:3.40.50.261 240 385 2.5E-42 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 Gene3D G3DSA:3.30.470.20 96 239 8.2E-52 T 28-03-2018 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 TIGRFAM TIGR01016 sucCoAbeta: succinate-CoA ligase, beta subunit 1 385 2.0E-184 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 Hamap MF_00558 Succinate--CoA ligase [ADP-forming] subunit beta [sucC]. 1 386 43.501 T 28-03-2018 IPR005809 Succinate--CoA synthetase, beta subunit GO:0006099 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 Gene3D G3DSA:3.30.1490.20 21 95 1.7E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS07920 b30d7fec8447596cb9d5bbdc16344e33 388 SUPERFAMILY SSF52210 239 385 3.66E-53 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 SUPERFAMILY SSF56601 26 283 2.82E-77 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 Gene3D G3DSA:3.40.710.10 24 284 2.2E-34 T 28-03-2018 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 62 77 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 Pfam PF13354 Beta-lactamase enzyme family 49 255 6.9E-37 T 28-03-2018 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 28 52 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 138 162 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 200 215 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 102 127 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 217 232 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 164 189 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS19205 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 60 77 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 SUPERFAMILY SSF56601 26 283 2.82E-77 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 Gene3D G3DSA:3.40.710.10 24 284 2.2E-34 T 28-03-2018 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 62 77 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 Pfam PF13354 Beta-lactamase enzyme family 49 255 6.9E-37 T 28-03-2018 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 28 52 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 138 162 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 200 215 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 102 127 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 217 232 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 164 189 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26890 7e4f569c4983952bf330382fa639d206 286 PRINTS PR00118 Beta-lactamase class A signature 60 77 3.8E-79 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 Gene3D G3DSA:1.10.10.60 52 72 3.8E-10 T 28-03-2018 CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 Gene3D G3DSA:1.10.357.10 73 202 1.1E-25 T 28-03-2018 CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 24 63 2.7E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 Pfam PF08359 YsiA-like protein, C-terminal region 70 176 1.1E-4 T 28-03-2018 IPR013570 Transcription regulator YsiA, C-terminal CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 SUPERFAMILY SSF46689 6 86 1.59E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 SUPERFAMILY SSF48498 84 199 2.76E-25 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS27255 4ec9e95e19b0de5aba019ec409cf9507 202 Gene3D G3DSA:1.10.10.60 11 51 7.5E-11 T 28-03-2018 CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 44 60 2.0E-21 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 17 33 2.0E-21 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 62 74 2.0E-21 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 2.0E-21 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 SUPERFAMILY SSF159127 1 86 1.19E-26 T 28-03-2018 CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 Pfam PF01455 HupF/HypC family 1 71 8.1E-25 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 84 2.6E-30 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS19850 5a7684981e4696be63b1185269a1adcb 90 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 28-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Pfam PF01300 Telomere recombination 208 373 5.2E-49 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Gene3D G3DSA:3.30.420.40 566 716 1.3E-27 T 28-03-2018 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Gene3D G3DSA:3.30.70.100 3 97 2.6E-21 T 28-03-2018 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 PIRSF PIRSF006256 4 747 2.7E-270 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 SUPERFAMILY SSF55821 175 379 1.13E-47 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 SUPERFAMILY SSF54975 8 91 6.98E-21 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Gene3D G3DSA:3.90.870.10 189 382 1.5E-50 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 ProSitePatterns PS00150 Acylphosphatase signature 1. 13 23 - T 28-03-2018 IPR017968 Acylphosphatase, conserved site KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Pfam PF07503 HypF finger 108 141 6.0E-16 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Pfam PF07503 HypF finger 158 190 3.1E-16 T 28-03-2018 IPR011125 Zinc finger, HypF-type GO:0008270 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 Pfam PF00708 Acylphosphatase 9 90 1.2E-16 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS19765 2b0c728f7112ab1e9b0ffddc33b6054b 753 TIGRFAM TIGR00143 hypF: carbamoyltransferase HypF 11 738 1.9E-296 T 28-03-2018 IPR004421 Carbamoyltransferase, HypF-type GO:0016743|GO:0046872|GO:0046944 CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 ProSitePatterns PS00942 glpT family of transporters signature. 151 167 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 Pfam PF07690 Major Facilitator Superfamily 35 396 3.9E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 Gene3D G3DSA:1.20.1250.20 16 212 1.9E-30 T 28-03-2018 CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 PIRSF PIRSF002808 6 442 3.5E-154 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 SUPERFAMILY SSF103473 17 439 2.88E-77 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 413 3.6E-153 T 28-03-2018 CI104_RS00205 2da02460e03006023e9628f849f4cc3c 442 Gene3D G3DSA:1.20.1250.20 237 442 3.6E-27 T 28-03-2018 CI104_RS20845 509988ed9223f9f124d61ad00389153d 334 SUPERFAMILY SSF53686 4 332 5.21E-90 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS20845 509988ed9223f9f124d61ad00389153d 334 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 319 3.6E-57 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS20845 509988ed9223f9f124d61ad00389153d 334 Gene3D G3DSA:3.40.50.1100 48 148 2.7E-30 T 28-03-2018 CI104_RS20845 509988ed9223f9f124d61ad00389153d 334 PIRSF PIRSF006278 1 334 7.3E-105 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CI104_RS20845 509988ed9223f9f124d61ad00389153d 334 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 9 329 4.2E-99 T 28-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CI104_RS20845 509988ed9223f9f124d61ad00389153d 334 Gene3D G3DSA:3.40.50.1100 149 334 1.2E-31 T 28-03-2018 CI104_RS22310 93ae6c8b62396f5427e7e92b65cf4f2a 384 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 138 249 1.5E-10 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS22310 93ae6c8b62396f5427e7e92b65cf4f2a 384 Gene3D G3DSA:3.40.50.720 1 139 7.2E-35 T 28-03-2018 CI104_RS22310 93ae6c8b62396f5427e7e92b65cf4f2a 384 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 125 1.3E-19 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS22310 93ae6c8b62396f5427e7e92b65cf4f2a 384 Gene3D G3DSA:3.30.360.10 140 359 3.3E-38 T 28-03-2018 CI104_RS22310 93ae6c8b62396f5427e7e92b65cf4f2a 384 SUPERFAMILY SSF55347 131 280 6.38E-31 T 28-03-2018 CI104_RS22310 93ae6c8b62396f5427e7e92b65cf4f2a 384 SUPERFAMILY SSF51735 2 154 3.63E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 SUPERFAMILY SSF100950 78 238 1.36E-25 T 28-03-2018 CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 Pfam PF00455 DeoR C terminal sensor domain 79 236 2.4E-46 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 SMART SM01134 77 237 4.1E-57 T 28-03-2018 CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 SMART SM00420 8 61 3.7E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 Gene3D G3DSA:1.10.10.10 1 58 2.0E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 Pfam PF08220 DeoR-like helix-turn-helix domain 8 64 1.3E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13525 8dc27fbdec07e1c3ccfc62a34f030fe9 258 Gene3D G3DSA:3.40.50.1360 77 243 2.9E-30 T 28-03-2018 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Pfam PF00912 Transglycosylase 208 379 1.8E-54 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Pfam PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal 1 78 9.0E-28 T 28-03-2018 IPR032730 Transglycosylase PBP1b, N-terminal transmembrane domain CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 SUPERFAMILY SSF56601 411 783 5.99E-105 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 SUPERFAMILY SSF56601 361 383 5.99E-105 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 TIGRFAM TIGR02071 PBP_1b: penicillin-binding protein 1B 67 794 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Pfam PF00905 Penicillin binding protein transpeptidase domain 472 714 3.5E-26 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Gene3D G3DSA:1.20.5.100 56 94 1.0E-16 T 28-03-2018 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 PIRSF PIRSF002799 11 843 0.0 T 28-03-2018 IPR011813 Penicillin-binding protein 1B GO:0008233|GO:0008955|GO:0009252|GO:0009274|GO:0046677 KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Gene3D G3DSA:3.30.2060.10 111 197 7.9E-27 T 28-03-2018 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Pfam PF14814 Bifunctional transglycosylase second domain 112 196 4.3E-27 T 28-03-2018 IPR028166 Bifunctional transglycosylase second domain KEGG: 00500+2.4.1.12|KEGG: 00550+2.4.1.129|MetaCyc: PWY-1001|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Gene3D G3DSA:1.10.3810.10 198 396 7.5E-62 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 SUPERFAMILY SSF53955 196 402 1.77E-65 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS05195 1388d609a0a4c7a262b702e934cb03e9 845 Gene3D G3DSA:3.40.710.10 403 833 3.0E-98 T 28-03-2018 CI104_RS21425 fc410c923e7a0a68016461f9737665d1 355 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 43 272 1.6E-11 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS21425 fc410c923e7a0a68016461f9737665d1 355 SUPERFAMILY SSF111369 44 167 6.54E-11 T 28-03-2018 CI104_RS21425 fc410c923e7a0a68016461f9737665d1 355 Gene3D G3DSA:2.40.50.100 45 116 8.9E-13 T 28-03-2018 CI104_RS21425 fc410c923e7a0a68016461f9737665d1 355 Gene3D G3DSA:1.10.287.470 117 166 1.2E-8 T 28-03-2018 CI104_RS21425 fc410c923e7a0a68016461f9737665d1 355 SUPERFAMILY SSF111369 177 254 3.14E-6 T 28-03-2018 CI104_RS21425 fc410c923e7a0a68016461f9737665d1 355 Gene3D G3DSA:2.40.50.100 195 296 0.0081 T 28-03-2018 CI104_RS18990 98f3468a9b1c3f94dcce11aa5bdd1f30 172 Pfam PF13689 Domain of unknown function (DUF4154) 34 167 1.3E-29 T 28-03-2018 IPR025293 Protein of unknown function DUF4154 CI104_RS16370 f5cd93674ba6397c47743f9ca026d1a4 245 TIGRFAM TIGR00007 TIGR00007: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase 2 238 2.6E-79 T 28-03-2018 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CI104_RS16370 f5cd93674ba6397c47743f9ca026d1a4 245 Gene3D G3DSA:3.20.20.70 1 245 2.3E-53 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS16370 f5cd93674ba6397c47743f9ca026d1a4 245 Hamap MF_01014 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase [hisA]. 1 241 35.539 T 28-03-2018 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase GO:0000105|GO:0003949 KEGG: 00340+5.3.1.16 CI104_RS16370 f5cd93674ba6397c47743f9ca026d1a4 245 Pfam PF00977 Histidine biosynthesis protein 1 234 1.8E-75 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CI104_RS16370 f5cd93674ba6397c47743f9ca026d1a4 245 SUPERFAMILY SSF51366 1 243 3.84E-66 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 Gene3D G3DSA:3.40.250.10 156 283 2.6E-27 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 Gene3D G3DSA:3.40.250.10 1 154 3.1E-35 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 SUPERFAMILY SSF52821 3 151 1.83E-42 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 SUPERFAMILY SSF52821 165 279 1.7E-34 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 ProSitePatterns PS00683 Rhodanese C-terminal signature. 259 269 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 Pfam PF00581 Rhodanese-like domain 9 128 7.4E-19 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 Pfam PF00581 Rhodanese-like domain 165 270 2.8E-11 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 SMART SM00450 7 132 1.5E-29 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 SMART SM00450 155 275 1.5E-23 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS18575 0ad0bc484822df7edfb373c8796b6dd3 283 ProSitePatterns PS00380 Rhodanese signature 1. 42 53 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CI104_RS04480 8b58b81ecc8ecf2d97a14e025483e79e 257 Pfam PF03883 Peroxide stress protein YaaA 1 243 3.4E-92 T 28-03-2018 IPR005583 Peroxide stress protein YaaA CI104_RS04480 8b58b81ecc8ecf2d97a14e025483e79e 257 Hamap MF_00652 UPF0246 protein YaaA [yaaA]. 1 255 37.988 T 28-03-2018 IPR005583 Peroxide stress protein YaaA CI104_RS01330 9a5048d56ce37aba030396230ca17faf 271 Gene3D G3DSA:3.40.1130.10 42 263 1.1E-25 T 28-03-2018 CI104_RS01330 9a5048d56ce37aba030396230ca17faf 271 SMART SM00563 90 198 1.3E-18 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS01330 9a5048d56ce37aba030396230ca17faf 271 SUPERFAMILY SSF69593 30 241 9.81E-28 T 28-03-2018 CI104_RS01330 9a5048d56ce37aba030396230ca17faf 271 Pfam PF01553 Acyltransferase 79 197 1.5E-16 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS14550 2edb8533a504de78bcab099010993249 272 Gene3D G3DSA:1.10.10.10 16 84 1.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14550 2edb8533a504de78bcab099010993249 272 SUPERFAMILY SSF46785 18 95 4.85E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14550 2edb8533a504de78bcab099010993249 272 SMART SM00866 105 247 2.9E-28 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS14550 2edb8533a504de78bcab099010993249 272 Pfam PF07702 UTRA domain 105 245 1.3E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS14550 2edb8533a504de78bcab099010993249 272 SUPERFAMILY SSF64288 72 251 7.07E-45 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS14550 2edb8533a504de78bcab099010993249 272 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 58 74 2.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14550 2edb8533a504de78bcab099010993249 272 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 44 58 2.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14550 2edb8533a504de78bcab099010993249 272 SMART SM00345 25 84 2.8E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14550 2edb8533a504de78bcab099010993249 272 Gene3D G3DSA:3.40.1410.10 85 254 1.7E-37 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS14550 2edb8533a504de78bcab099010993249 272 Pfam PF00392 Bacterial regulatory proteins, gntR family 22 84 2.3E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 Pfam PF00574 Clp protease 26 205 6.8E-90 T 28-03-2018 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 Gene3D G3DSA:3.90.226.10 15 207 4.5E-48 T 28-03-2018 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 TIGRFAM TIGR00493 clpP: ATP-dependent Clp endopeptidase, proteolytic subunit ClpP 14 205 4.0E-112 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 ProSitePatterns PS00382 Endopeptidase Clp histidine active site. 125 138 - T 28-03-2018 IPR033135 ClpP, histidine active site CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 ProSitePatterns PS00381 Endopeptidase Clp serine active site. 103 114 - T 28-03-2018 IPR018215 ClpP, Ser active site CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 124 143 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 181 200 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 32 47 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 103 120 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 PRINTS PR00127 Clp protease catalytic subunit P signature 72 92 1.7E-54 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 SUPERFAMILY SSF52096 23 206 6.63E-76 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS06420 a3dbac2d1a5d097c9e4411ff6ac30753 207 Hamap MF_00444 ATP-dependent Clp protease proteolytic subunit [clpP]. 16 206 45.028 T 28-03-2018 IPR001907 ATP-dependent Clp protease proteolytic subunit GO:0004252|GO:0006508 CI104_RS09185 0103e1d9d9fb79f7c15fef666c7ebdd6 191 Pfam PF03358 NADPH-dependent FMN reductase 1 140 6.5E-35 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CI104_RS09185 0103e1d9d9fb79f7c15fef666c7ebdd6 191 SUPERFAMILY SSF52218 1 141 3.26E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS09185 0103e1d9d9fb79f7c15fef666c7ebdd6 191 TIGRFAM TIGR03567 FMN_reduc_SsuE: FMN reductase 2 170 9.2E-73 T 28-03-2018 IPR020048 NADPH-dependent FMN reductase, SsuE GO:0008752|GO:0046306|GO:0055114 KEGG: 00740+1.5.1.38|MetaCyc: PWY-7723 CI104_RS09185 0103e1d9d9fb79f7c15fef666c7ebdd6 191 Gene3D G3DSA:3.40.50.360 1 181 4.8E-31 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Gene3D G3DSA:3.50.50.60 228 340 3.2E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 442 458 5.6E-38 T 28-03-2018 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 315 333 5.6E-38 T 28-03-2018 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 468 490 5.6E-38 T 28-03-2018 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 215 234 5.6E-38 T 28-03-2018 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 357 375 5.6E-38 T 28-03-2018 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 SUPERFAMILY SSF52833 106 197 2.93E-24 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Gene3D G3DSA:3.40.30.10 1 94 2.8E-28 T 28-03-2018 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 SUPERFAMILY SSF52833 1 101 5.59E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS07385 88549970659de43a611a7f717bb7920f 521 SUPERFAMILY SSF51905 206 514 5.89E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Pfam PF13192 Thioredoxin domain 126 194 5.5E-9 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS07385 88549970659de43a611a7f717bb7920f 521 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 345 365 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 478 496 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 246 261 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 316 324 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 353 377 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 266 276 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 405 421 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 214 236 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 338 350 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 444 465 2.1E-66 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 PIRSF PIRSF000238 1 521 6.0E-263 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Gene3D G3DSA:3.50.50.60 341 437 1.1E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Gene3D G3DSA:3.50.50.60 196 227 1.1E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 TIGRFAM TIGR03140 AhpF: alkyl hydroperoxide reductase subunit F 1 517 6.2E-240 T 28-03-2018 IPR012081 Alkyl hydroperoxide reductase subunit F GO:0000302|GO:0008785|GO:0016651|GO:0050660|GO:0051287|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Gene3D G3DSA:3.50.50.60 438 512 0.0057 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 213 503 2.5E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07385 88549970659de43a611a7f717bb7920f 521 Gene3D G3DSA:3.40.30.10 103 195 5.1E-8 T 28-03-2018 CI104_RS13960 7c3cd677664bc9f0272faea6b35a8182 293 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 282 4.9E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13960 7c3cd677664bc9f0272faea6b35a8182 293 Gene3D G3DSA:1.10.3720.10 13 287 2.6E-52 T 28-03-2018 CI104_RS13960 7c3cd677664bc9f0272faea6b35a8182 293 SUPERFAMILY SSF161098 57 282 2.09E-57 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 9.0E-87 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 PIRSF PIRSF001394 30 548 7.3E-234 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 74 325 4.3E-33 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 SUPERFAMILY SSF117457 361 536 3.14E-61 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 373 537 7.2E-64 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 Pfam PF05683 Fumarase C-terminus 332 537 2.7E-93 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS22965 b1a8540945a6060bcc64c04bea4044f9 548 Gene3D G3DSA:3.20.130.10 359 536 5.0E-68 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Pfam PF13438 Domain of unknown function (DUF4113) 372 419 4.4E-20 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 SUPERFAMILY SSF56672 1 234 1.33E-58 T 28-03-2018 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Pfam PF11799 impB/mucB/samB family C-terminal domain 239 354 7.4E-19 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Pfam PF00817 impB/mucB/samB family 6 148 1.5E-32 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Gene3D G3DSA:3.30.70.270 113 172 4.6E-8 T 28-03-2018 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Gene3D G3DSA:3.30.70.270 37 112 2.8E-15 T 28-03-2018 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 SUPERFAMILY SSF100879 246 345 4.12E-7 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Gene3D G3DSA:3.30.1490.100 247 362 5.1E-26 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS28055 6edfcfde2571d459466933e17916dfb5 423 Gene3D G3DSA:1.10.150.20 173 246 4.8E-13 T 28-03-2018 CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 SUPERFAMILY SSF56042 143 309 8.67E-40 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 Pfam PF00586 AIR synthase related protein, N-terminal domain 29 138 8.2E-21 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 TIGRFAM TIGR01379 thiL: thiamine-phosphate kinase 4 322 4.5E-118 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 PIRSF PIRSF005303 1 322 2.9E-87 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 SUPERFAMILY SSF55326 4 138 4.45E-34 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 Pfam PF02769 AIR synthase related protein, C-terminal domain 150 300 2.0E-8 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 Gene3D G3DSA:3.30.1330.10 1 142 2.8E-34 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 Hamap MF_02128 Thiamine-monophosphate kinase [thiL]. 3 319 31.939 T 28-03-2018 IPR006283 Thiamine-monophosphate kinase GO:0009030|GO:0009228 KEGG: 00730+2.7.4.16|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6896|MetaCyc: PWY-6897 CI104_RS06285 76bbf2697e78b70d3610b8bfd78a8a1c 325 Gene3D G3DSA:3.90.650.10 145 322 1.3E-47 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 Gene3D G3DSA:3.90.70.10 14 149 1.2E-38 T 28-03-2018 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 ProSitePatterns PS00211 ABC transporters family signature. 636 650 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 Pfam PF00005 ABC transporter 515 664 3.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 Pfam PF03412 Peptidase C39 family 13 140 8.5E-34 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 Gene3D G3DSA:1.20.1560.10 150 462 1.5E-36 T 28-03-2018 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 SUPERFAMILY SSF90123 166 466 6.02E-53 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 Gene3D G3DSA:3.40.50.300 495 714 2.4E-61 T 28-03-2018 CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 SUPERFAMILY SSF52540 496 711 7.17E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 SMART SM00382 524 708 5.9E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS27455 789f5e59492b009e42d7caa1fbc6ca26 719 Pfam PF00664 ABC transporter transmembrane region 170 435 4.6E-37 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS08630 0ab0ba8ddb31b3045539f4073ee46230 202 Gene3D G3DSA:1.20.144.10 7 178 8.2E-24 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS08630 0ab0ba8ddb31b3045539f4073ee46230 202 SMART SM00014 61 169 3.3E-27 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS08630 0ab0ba8ddb31b3045539f4073ee46230 202 SUPERFAMILY SSF48317 2 200 8.24E-40 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS08630 0ab0ba8ddb31b3045539f4073ee46230 202 Pfam PF01569 PAP2 superfamily 62 164 3.7E-14 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS16505 e32ff950dd3689095258472b8a4c2e22 159 Pfam PF00293 NUDIX domain 20 147 9.5E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS16505 e32ff950dd3689095258472b8a4c2e22 159 PIRSF PIRSF037599 1 152 1.7E-74 T 28-03-2018 IPR033715 GDP-mannose mannosyl hydrolase GO:0008727 CI104_RS16505 e32ff950dd3689095258472b8a4c2e22 159 Gene3D G3DSA:3.90.79.10 1 159 2.3E-24 T 28-03-2018 CI104_RS16505 e32ff950dd3689095258472b8a4c2e22 159 Hamap MF_00941 GDP-mannose mannosyl hydrolase [gmm]. 1 159 49.642 T 28-03-2018 IPR028613 GDP-mannose mannosyl hydrolase, Enterobacteria GO:0000287|GO:0008727|GO:0030145 CI104_RS16505 e32ff950dd3689095258472b8a4c2e22 159 ProSitePatterns PS00893 Nudix box signature. 50 71 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS16505 e32ff950dd3689095258472b8a4c2e22 159 SUPERFAMILY SSF55811 2 147 4.2E-27 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS06810 f02dec2c0435fd8082739d366df41eae 354 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 9 280 9.8E-39 T 28-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 CI104_RS06810 f02dec2c0435fd8082739d366df41eae 354 Gene3D G3DSA:1.20.120.230 158 289 2.9E-8 T 28-03-2018 CI104_RS16045 b584c6c737eed795224c4bcba40b65c0 85 SUPERFAMILY SSF89447 2 75 1.15E-14 T 28-03-2018 CI104_RS16045 b584c6c737eed795224c4bcba40b65c0 85 Gene3D G3DSA:2.10.260.10 1 85 9.7E-17 T 28-03-2018 CI104_RS16045 b584c6c737eed795224c4bcba40b65c0 85 SMART SM00966 7 52 0.0039 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CI104_RS23775 48e43a0e8f6ead1a329914d0295644dd 165 ProSitePatterns PS01109 Ribosomal protein L10 signature. 8 42 - T 28-03-2018 IPR002363 Ribosomal protein L10, eubacterial, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS23775 48e43a0e8f6ead1a329914d0295644dd 165 Hamap MF_00362 50S ribosomal protein L10 [rplJ]. 3 162 26.485 T 28-03-2018 IPR022973 Ribosomal protein L10 CI104_RS23775 48e43a0e8f6ead1a329914d0295644dd 165 Pfam PF00466 Ribosomal protein L10 5 101 4.1E-25 T 28-03-2018 IPR001790 Ribosomal protein L10P GO:0005622|GO:0042254 CI104_RS23775 48e43a0e8f6ead1a329914d0295644dd 165 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 78 161 1.0E-4 T 28-03-2018 CI104_RS23775 48e43a0e8f6ead1a329914d0295644dd 165 SUPERFAMILY SSF160369 4 160 2.35E-47 T 28-03-2018 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 Gene3D G3DSA:1.10.260.40 2 54 1.7E-20 T 28-03-2018 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 SMART SM00354 1 71 1.9E-34 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 Gene3D G3DSA:3.40.50.2300 55 178 1.8E-30 T 28-03-2018 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 SUPERFAMILY SSF47413 2 59 1.77E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 SUPERFAMILY SSF53822 60 332 7.07E-91 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 Pfam PF13377 Periplasmic binding protein-like domain 171 332 2.4E-42 T 28-03-2018 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 Gene3D G3DSA:3.40.50.2300 179 309 1.6E-48 T 28-03-2018 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 3.3E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 3.3E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS25080 0b1378d3e22fcaa99520636463395f27 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.0E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS03610 aac9a73cc7bc336b71af6d05e69f434e 100 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 9 88 5.0E-15 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 TIGRFAM TIGR02515 IV_pilus_PilQ: type IV pilus secretin PilQ 22 409 1.5E-126 T 28-03-2018 IPR013355 Type IV pilus secretin PilQ CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 397 411 1.3E-11 T 28-03-2018 IPR001775 GspD/PilQ family CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 374 392 1.3E-11 T 28-03-2018 IPR001775 GspD/PilQ family CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR00811 Bacterial general secretion pathway protein D signature 246 270 1.3E-11 T 28-03-2018 IPR001775 GspD/PilQ family CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR01032 Gene IV protein signature 390 412 1.4E-8 T 28-03-2018 CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR01032 Gene IV protein signature 271 294 1.4E-8 T 28-03-2018 CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR01032 Gene IV protein signature 337 365 1.4E-8 T 28-03-2018 CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 PRINTS PR01032 Gene IV protein signature 230 253 1.4E-8 T 28-03-2018 CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 Pfam PF03958 Bacterial type II/III secretion system short domain 122 180 7.6E-11 T 28-03-2018 IPR005644 NolW-like CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 Pfam PF00263 Bacterial type II and III secretion system protein 250 409 6.3E-46 T 28-03-2018 IPR004846 Type II/III secretion system GO:0009306 CI104_RS01785 134c4aae4cb2b2013eab88451e87d166 412 ProSitePatterns PS00875 Bacterial type II secretion system protein D signature. 355 388 - T 28-03-2018 IPR004845 Type II secretion system GspD, conserved site GO:0008565 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Pfam PF02503 Polyphosphate kinase middle domain 119 319 1.1E-41 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 SUPERFAMILY SSF56024 503 685 6.28E-69 T 28-03-2018 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 TIGRFAM TIGR03705 poly_P_kin: polyphosphate kinase 1 7 679 2.0E-257 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Gene3D G3DSA:3.30.1840.10 109 307 3.1E-51 T 28-03-2018 IPR024953 Polyphosphate kinase middle domain KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Pfam PF13089 Polyphosphate kinase N-terminal domain 7 109 3.6E-31 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Gene3D G3DSA:3.30.870.10 502 688 2.3E-32 T 28-03-2018 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 SUPERFAMILY SSF140356 3 105 7.85E-34 T 28-03-2018 IPR025198 Polyphosphate kinase N-terminal domain KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 PIRSF PIRSF015589 1 688 7.6E-241 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 SUPERFAMILY SSF56024 320 499 3.14E-57 T 28-03-2018 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Pfam PF13090 Polyphosphate kinase C-terminal domain 333 678 1.5E-144 T 28-03-2018 IPR025200 Polyphosphate kinase C-terminal domain KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 SUPERFAMILY SSF143724 107 313 7.46E-59 T 28-03-2018 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Gene3D G3DSA:3.30.870.10 316 501 3.6E-27 T 28-03-2018 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Hamap MF_00347 Polyphosphate kinase [ppk]. 5 683 27.348 T 28-03-2018 IPR003414 Polyphosphate kinase GO:0006799|GO:0008976|GO:0009358 KEGG: 00190+2.7.4.1 CI104_RS18480 4b38040e5aeac6d53e0ba09033f17a13 688 Gene3D G3DSA:1.20.58.310 9 108 3.4E-34 T 28-03-2018 CI104_RS24750 f90012c8ec4c9c49b9384b03e7c7445b 206 Pfam PF01810 LysE type translocator 14 202 4.5E-48 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS24750 f90012c8ec4c9c49b9384b03e7c7445b 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 19 200 1.0E-56 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CI104_RS24750 f90012c8ec4c9c49b9384b03e7c7445b 206 PIRSF PIRSF006324 1 205 1.6E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS01885 0089bb21b46c4a6f396b0cc1ea44a958 55 ProDom PD026929 YHFG 1 55 2.0E-20 T 28-03-2018 IPR022541 Protein of unknown function DUF2559 CI104_RS01885 0089bb21b46c4a6f396b0cc1ea44a958 55 Pfam PF10832 Protein of unknown function (DUF2559) 2 55 9.6E-30 T 28-03-2018 IPR022541 Protein of unknown function DUF2559 CI104_RS19880 0406678ec539998d90e1f3b5e1f42332 273 Pfam PF00005 ABC transporter 22 169 2.2E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS19880 0406678ec539998d90e1f3b5e1f42332 273 SMART SM00382 31 247 4.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19880 0406678ec539998d90e1f3b5e1f42332 273 SUPERFAMILY SSF52540 4 232 7.42E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19880 0406678ec539998d90e1f3b5e1f42332 273 Gene3D G3DSA:3.40.50.300 1 242 4.7E-57 T 28-03-2018 CI104_RS19880 0406678ec539998d90e1f3b5e1f42332 273 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 Gene3D G3DSA:3.20.20.70 1 292 5.1E-92 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 TIGRFAM TIGR00674 dapA: 4-hydroxy-tetrahydrodipicolinate synthase 4 288 5.6E-126 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 SUPERFAMILY SSF51569 1 292 3.35E-100 T 28-03-2018 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 Pfam PF00701 Dihydrodipicolinate synthetase family 2 288 2.4E-123 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 35 56 5.0E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 128 145 5.0E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 71 89 5.0E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 PRINTS PR00146 Dihydrodipicolinate synthase signature 103 119 5.0E-35 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 Hamap MF_00418 4-hydroxy-tetrahydrodipicolinate synthase [dapA]. 1 288 66.01 T 28-03-2018 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA GO:0008840|GO:0009089 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 PIRSF PIRSF001365 1 292 1.9E-98 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 SMART SM01130 1 290 1.3E-142 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 38 55 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS18400 b9b27e4f5cbf22788c1ebe81e0c1940a 292 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 133 163 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CI104_RS20450 deeb060dd546dd0c2df9951efec08495 278 Gene3D G3DSA:2.60.120.10 132 278 5.7E-54 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS20450 deeb060dd546dd0c2df9951efec08495 278 Hamap MF_00687 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase [kduI]. 1 278 56.97 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CI104_RS20450 deeb060dd546dd0c2df9951efec08495 278 Pfam PF04962 KduI/IolB family 32 273 7.1E-42 T 28-03-2018 IPR021120 KduI/IolB isomerase GO:0016861 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CI104_RS20450 deeb060dd546dd0c2df9951efec08495 278 Gene3D G3DSA:2.60.120.520 24 131 1.8E-52 T 28-03-2018 IPR027449 5-keto-4-deoxyuronate isomerase, N-terminal domain KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CI104_RS20450 deeb060dd546dd0c2df9951efec08495 278 PIRSF PIRSF006625 1 278 7.1E-135 T 28-03-2018 IPR007045 5-keto 4-deoxyuronate isomerase GO:0008697|GO:0045490 KEGG: 00040+5.3.1.17|MetaCyc: PWY-6507 CI104_RS20450 deeb060dd546dd0c2df9951efec08495 278 SUPERFAMILY SSF51182 2 262 1.22E-109 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS21260 6f18bc6e42d3ee287420c7e744271eb0 354 SUPERFAMILY SSF55073 194 349 3.14E-43 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS21260 6f18bc6e42d3ee287420c7e744271eb0 354 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 187 348 2.6E-46 T 28-03-2018 IPR000160 GGDEF domain CI104_RS21260 6f18bc6e42d3ee287420c7e744271eb0 354 SMART SM00267 178 348 3.3E-56 T 28-03-2018 IPR000160 GGDEF domain CI104_RS21260 6f18bc6e42d3ee287420c7e744271eb0 354 Pfam PF00990 Diguanylate cyclase, GGDEF domain 190 344 2.3E-45 T 28-03-2018 IPR000160 GGDEF domain CI104_RS21260 6f18bc6e42d3ee287420c7e744271eb0 354 Gene3D G3DSA:3.30.70.270 172 349 3.4E-49 T 28-03-2018 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Pfam PF02875 Mur ligase family, glutamate ligase domain 339 425 1.4E-25 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Pfam PF01225 Mur ligase family, catalytic domain 24 102 5.7E-12 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Gene3D G3DSA:3.40.1190.10 105 342 1.2E-54 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Hamap MF_00208 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [murE]. 4 491 35.003 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Pfam PF08245 Mur ligase middle domain 114 318 6.1E-52 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Gene3D G3DSA:3.40.1390.10 2 104 5.7E-24 T 28-03-2018 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 SUPERFAMILY SSF63418 5 103 8.63E-23 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 Gene3D G3DSA:3.90.190.20 343 494 3.7E-49 T 28-03-2018 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 SUPERFAMILY SSF53623 105 338 6.67E-81 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 TIGRFAM TIGR01085 murE: UDP-N-acetylmuramyl-tripeptide synthetase 21 491 3.1E-166 T 28-03-2018 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase GO:0005524|GO:0005737|GO:0008360|GO:0016881|GO:0051301 CI104_RS04875 edd4f1cde8deed72de47a676e95c8593 495 SUPERFAMILY SSF53244 339 491 6.26E-51 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 Gene3D G3DSA:1.10.287.70 573 640 1.2E-17 T 28-03-2018 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 SUPERFAMILY SSF81442 43 560 2.49E-180 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 383 401 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 47 72 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 97 120 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 124 148 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 198 216 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 278 299 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 411 430 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 166 178 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 324 339 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 461 482 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 227 246 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 PRINTS PR01165 Cytochrome c oxidase subunit I signature 348 369 4.1E-94 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 TIGRFAM TIGR02843 CyoB: cytochrome o ubiquinol oxidase, subunit I 2 647 0.0 T 28-03-2018 IPR014207 Cytochrome o ubiquinol oxidase, subunit I GO:0016682|GO:0055114 MetaCyc: PWY-7544 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 ProSitePatterns PS00077 Heme-copper oxidase catalytic subunit, copper B binding region signature. 280 334 - T 28-03-2018 IPR023615 Cytochrome c oxidase, subunit I, copper-binding site GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 Gene3D G3DSA:1.20.210.10 43 561 1.6E-186 T 28-03-2018 IPR023616 Cytochrome c oxidase-like, subunit I domain GO:0004129|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06385 2bf380eba278fe23a2ab84e0a84cb2bf 663 Pfam PF00115 Cytochrome C and Quinol oxidase polypeptide I 56 503 6.0E-136 T 28-03-2018 IPR000883 Cytochrome c oxidase subunit I GO:0004129|GO:0005506|GO:0009055|GO:0009060|GO:0016021|GO:0020037|GO:0055114 KEGG: 00190+1.9.3.1|MetaCyc: PWY-3781|MetaCyc: PWY-4521|MetaCyc: PWY-6692|MetaCyc: PWY-7279|Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS09180 c81f214be8164d7c6f770bee345ed7a6 324 SMART SM00062 33 254 3.5E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS09180 c81f214be8164d7c6f770bee345ed7a6 324 Gene3D G3DSA:3.40.190.10 29 133 2.5E-15 T 28-03-2018 CI104_RS09180 c81f214be8164d7c6f770bee345ed7a6 324 Gene3D G3DSA:3.40.190.10 134 322 1.4E-33 T 28-03-2018 CI104_RS09180 c81f214be8164d7c6f770bee345ed7a6 324 Pfam PF09084 NMT1/THI5 like 70 188 2.2E-11 T 28-03-2018 IPR015168 SsuA/THI5-like CI104_RS09180 c81f214be8164d7c6f770bee345ed7a6 324 TIGRFAM TIGR01728 SsuA_fam: ABC transporter, substrate-binding protein, aliphatic sulfonates family 34 314 1.9E-83 T 28-03-2018 IPR010067 Aliphatic sulfonates-binding protein GO:0016020|GO:0042626 CI104_RS09180 c81f214be8164d7c6f770bee345ed7a6 324 SUPERFAMILY SSF53850 31 263 3.54E-49 T 28-03-2018 CI104_RS18210 7f5216c3eb002b590f069fb1bb008866 141 Gene3D G3DSA:3.40.630.30 1 72 1.6E-16 T 28-03-2018 CI104_RS18210 7f5216c3eb002b590f069fb1bb008866 141 PIRSF PIRSF037663 1 130 6.1E-11 T 28-03-2018 IPR017255 Acetyltransferase, GNAT, predicted CI104_RS18210 7f5216c3eb002b590f069fb1bb008866 141 Pfam PF00583 Acetyltransferase (GNAT) family 18 123 2.2E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS18210 7f5216c3eb002b590f069fb1bb008866 141 Hamap MF_01127 Acetyltransferase YpeA [ypeA]. 1 141 47.6 T 28-03-2018 IPR023072 Acetyltransferase, YpeA GO:0016747 CI104_RS18210 7f5216c3eb002b590f069fb1bb008866 141 Gene3D G3DSA:3.40.630.30 73 129 7.6E-16 T 28-03-2018 CI104_RS18210 7f5216c3eb002b590f069fb1bb008866 141 SUPERFAMILY SSF55729 1 128 7.69E-30 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS00820 f6026ed5960d81831e0c473932e531de 393 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 383 7.7E-50 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS00820 f6026ed5960d81831e0c473932e531de 393 Gene3D G3DSA:1.10.3470.10 51 389 1.0E-26 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS06890 8eb48c979b7a1b3978d5219bf3b9b902 464 Gene3D G3DSA:1.20.1250.20 254 462 6.3E-21 T 28-03-2018 CI104_RS06890 8eb48c979b7a1b3978d5219bf3b9b902 464 Gene3D G3DSA:1.20.1250.20 9 253 7.8E-28 T 28-03-2018 CI104_RS06890 8eb48c979b7a1b3978d5219bf3b9b902 464 Pfam PF00083 Sugar (and other) transporter 80 458 7.9E-30 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS06890 8eb48c979b7a1b3978d5219bf3b9b902 464 SUPERFAMILY SSF103473 14 458 4.84E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 9 152 8.89E-38 T 28-03-2018 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 SUPERFAMILY SSF53067 153 340 3.69E-50 T 28-03-2018 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Pfam PF06723 MreB/Mbl protein 11 338 1.5E-150 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 8 172 4.3E-42 T 28-03-2018 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 72 95 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 191 211 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 52 70 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 136 155 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 PRINTS PR01652 Bacterial cell shape determinant MreB/Mbl protein signature 304 330 1.2E-65 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.30.420.40 256 321 1.8E-8 T 28-03-2018 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 Gene3D G3DSA:3.90.640.10 190 255 8.8E-28 T 28-03-2018 CI104_RS02465 73d2ba4e5d849d4bc6ef9989dcc9beba 347 TIGRFAM TIGR00904 mreB: cell shape determining protein, MreB/Mrl family 9 339 9.6E-171 T 28-03-2018 IPR004753 Cell shape determining protein MreB GO:0000902 CI104_RS06225 8c5c2f5217a0608561166e7413178e55 375 TIGRFAM TIGR00430 Q_tRNA_tgt: tRNA-guanine transglycosylase 3 368 7.3E-192 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS06225 8c5c2f5217a0608561166e7413178e55 375 Pfam PF01702 Queuine tRNA-ribosyltransferase 126 361 8.8E-94 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS06225 8c5c2f5217a0608561166e7413178e55 375 SUPERFAMILY SSF51713 1 364 5.62E-164 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS06225 8c5c2f5217a0608561166e7413178e55 375 Gene3D G3DSA:3.20.20.105 1 368 1.2E-160 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS06225 8c5c2f5217a0608561166e7413178e55 375 Hamap MF_00168 Queuine tRNA-ribosyltransferase [tgt]. 1 364 57.91 T 28-03-2018 IPR004803 tRNA-guanine transglycosylase GO:0008479|GO:0101030 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS06225 8c5c2f5217a0608561166e7413178e55 375 TIGRFAM TIGR00449 tgt_general: tRNA-guanine family transglycosylase 3 367 9.4E-182 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS03465 0f12a6cdf2b5bd9ecb7ec9de0bf9a29f 802 ProDom PD092055 ENDONUCLEASE POSSIBLE PROPHAGE FOR ORFE TRANSPOSABLE FELS-2 RETRON STY4635 ELEMENT 660 800 2.0E-72 T 28-03-2018 IPR020220 Retron, EC67, C-terminal GO:0016788 CI104_RS03465 0f12a6cdf2b5bd9ecb7ec9de0bf9a29f 802 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 193 515 2.1E-124 T 28-03-2018 IPR008766 Replication gene A protein GO:0006260 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 Pfam PF01106 NifU-like domain 111 177 1.6E-20 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 ProDom PD002830 NIFU NIFU NITROGEN-FIXING C-TERMINAL FIXATION NITROGEN NIFU-LIKE DOMAIN CLUSTER HESB/YADR/YFHF:NITROGEN-FIXING 119 177 6.0E-28 T 28-03-2018 IPR001075 NIF system FeS cluster assembly, NifU, C-terminal GO:0005506|GO:0016226|GO:0051536 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 TIGRFAM TIGR03341 YhgI_GntY: IscR-regulated protein YhgI 2 191 1.6E-100 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 SUPERFAMILY SSF117916 95 184 3.27E-25 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 Hamap MF_01637 Fe/S biogenesis protein NfuA [nfuA]. 1 191 46.219 T 28-03-2018 IPR017726 Fe/S biogenesis protein NfuA GO:0016226|GO:0051539|GO:0051604 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 Pfam PF01521 Iron-sulphur cluster biosynthesis 2 99 9.2E-13 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 SUPERFAMILY SSF89360 1 97 2.16E-20 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 Gene3D G3DSA:3.30.300.130 102 187 8.4E-26 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CI104_RS01670 df157bdb202a0eac77f0406a933334b8 191 Gene3D G3DSA:2.60.300.12 1 101 1.2E-15 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS25240 c921d8ae810c11eff66fdcfdb3db36bc 188 Pfam PF03358 NADPH-dependent FMN reductase 6 148 2.7E-38 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CI104_RS25240 c921d8ae810c11eff66fdcfdb3db36bc 188 Gene3D G3DSA:3.40.50.360 1 188 7.8E-36 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS25240 c921d8ae810c11eff66fdcfdb3db36bc 188 SUPERFAMILY SSF52218 6 178 2.1E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 6 177 2.7E-29 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 203 315 9.1E-14 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 Gene3D G3DSA:3.40.50.1220 199 345 2.8E-21 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 PIRSF PIRSF036565 1 551 7.1E-196 T 28-03-2018 IPR012110 Thiamine pyrophosphate (TPP)-dependent enzyme GO:0016831 CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 393 527 3.1E-18 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 417 436 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 SUPERFAMILY SSF52518 5 179 1.07E-39 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 Gene3D G3DSA:3.40.50.970 346 543 1.7E-34 T 28-03-2018 CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 SUPERFAMILY SSF52467 167 335 3.93E-24 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 SUPERFAMILY SSF52518 356 540 2.76E-42 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS17990 26c41fa4155910c488520b90dac735a3 551 Gene3D G3DSA:3.40.50.970 1 198 4.1E-42 T 28-03-2018 CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 SUPERFAMILY SSF53850 85 285 1.96E-38 T 28-03-2018 CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 Pfam PF03466 LysR substrate binding domain 85 285 4.0E-46 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 Gene3D G3DSA:3.40.190.10 172 260 3.6E-16 T 28-03-2018 CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 Gene3D G3DSA:1.10.10.10 1 82 6.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 Gene3D G3DSA:3.40.190.10 83 171 3.5E-19 T 28-03-2018 CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 SUPERFAMILY SSF46785 1 109 1.47E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12895 11f04554c64584ef79b0809a299a3ad9 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 4.5E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00170 a3f21030050ff24d69762a87c0e5255f 96 TIGRFAM TIGR00119 acolac_sm: acetolactate synthase, small subunit 9 82 4.2E-16 T 28-03-2018 IPR004789 Acetolactate synthase, small subunit GO:0003984|GO:0009082 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CI104_RS00170 a3f21030050ff24d69762a87c0e5255f 96 Pfam PF13710 ACT domain 18 78 4.6E-9 T 28-03-2018 CI104_RS00170 a3f21030050ff24d69762a87c0e5255f 96 Gene3D G3DSA:3.30.70.260 1 96 2.7E-20 T 28-03-2018 CI104_RS00170 a3f21030050ff24d69762a87c0e5255f 96 SUPERFAMILY SSF55021 9 80 4.33E-16 T 28-03-2018 CI104_RS00170 a3f21030050ff24d69762a87c0e5255f 96 ProDom PD002844 SMALL SUBUNIT ACETOLACTATE SYNTHASE SYNTHASE TRANSFERASE ACID BIOSYNTHESIS III LYASE 15 78 1.0E-15 T 28-03-2018 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Gene3D G3DSA:2.40.30.10 569 697 6.9E-30 T 28-03-2018 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Pfam PF08364 Bacterial translation initiation factor IF-2 associated region 57 95 5.2E-16 T 28-03-2018 IPR013575 Initiation factor 2 associated domain, bacterial CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Gene3D G3DSA:3.40.50.300 379 568 2.5E-39 T 28-03-2018 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Gene3D G3DSA:2.40.30.10 796 894 3.5E-31 T 28-03-2018 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 ProSitePatterns PS01176 Initiation factor 2 signature. 846 868 - T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Pfam PF11987 Translation-initiation factor 2 680 785 2.3E-36 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Gene3D G3DSA:3.30.56.50 4 45 5.4E-11 T 28-03-2018 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Gene3D G3DSA:3.30.56.50 322 363 1.6E-9 T 28-03-2018 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 SUPERFAMILY SSF46955 3 50 1.35E-12 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 399 554 7.0E-34 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 SUPERFAMILY SSF52156 673 802 2.22E-37 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Hamap MF_00100_B Translation initiation factor IF-2 [infB]. 3 893 17.633 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 TIGRFAM TIGR00487 IF-2: translation initiation factor IF-2 312 895 1.5E-297 T 28-03-2018 IPR000178 Translation initiation factor aIF-2, bacterial-like GO:0003743|GO:0005525|GO:0005622|GO:0006413 Reactome: R-HSA-5368286 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Gene3D G3DSA:3.40.50.10050 698 774 3.2E-25 T 28-03-2018 IPR023115 Translation initiation factor IF- 2, domain 3 CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 SUPERFAMILY SSF50447 797 893 4.12E-34 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 SUPERFAMILY SSF52540 395 563 1.27E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 1 51 1.1E-8 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Pfam PF04760 Translation initiation factor IF-2, N-terminal region 320 370 1.1E-14 T 28-03-2018 IPR006847 Translation initiation factor IF-2, N-terminal CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 SUPERFAMILY SSF50447 569 650 7.9E-23 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS02895 ba73b1e5e7070c422615a38e85c62667 896 Pfam PF00009 Elongation factor Tu GTP binding domain 400 556 4.3E-35 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS14480 2d72305b12910014027723d0e7d60f45 355 SUPERFAMILY SSF81345 20 350 1.28E-76 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS14480 2d72305b12910014027723d0e7d60f45 355 Gene3D G3DSA:1.10.3470.10 16 355 5.4E-68 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS14480 2d72305b12910014027723d0e7d60f45 355 Pfam PF01032 FecCD transport family 29 350 6.6E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 ProSitePatterns PS00455 Putative AMP-binding domain signature. 139 150 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Pfam PF13193 AMP-binding enzyme C-terminal domain 366 423 2.5E-6 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Pfam PF00501 AMP-binding enzyme 13 355 3.2E-50 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Hamap MF_00731 2-succinylbenzoate--CoA ligase [menE]. 4 448 35.536 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Gene3D G3DSA:3.30.300.30 351 455 2.9E-16 T 28-03-2018 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Gene3D G3DSA:3.40.50.980 3 144 5.8E-20 T 28-03-2018 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Gene3D G3DSA:3.40.50.980 145 281 2.3E-23 T 28-03-2018 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 SUPERFAMILY SSF56801 8 451 6.28E-92 T 28-03-2018 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 TIGRFAM TIGR01923 menE: O-succinylbenzoate-CoA ligase 29 444 1.7E-114 T 28-03-2018 IPR010192 2-succinylbenzoate--CoA ligase GO:0005524|GO:0008756|GO:0009234 KEGG: 00130+6.2.1.26|MetaCyc: PWY-5837 CI104_RS17440 c65fa91bc771b54b2145b318a9e567a4 456 Gene3D G3DSA:2.30.38.10 282 350 2.6E-9 T 28-03-2018 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Pfam PF14579 Helix-hairpin-helix motif 808 897 3.3E-25 T 28-03-2018 IPR029460 DNA polymerase, helix-hairpin-helix motif KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 SUPERFAMILY SSF89550 6 263 8.44E-17 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Pfam PF07733 Bacterial DNA polymerase III alpha subunit 292 735 1.5E-177 T 28-03-2018 IPR011708 Bacterial DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Gene3D G3DSA:1.10.150.280 780 894 3.6E-8 T 28-03-2018 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Pfam PF02811 PHP domain 8 171 4.4E-40 T 28-03-2018 IPR004013 PHP domain GO:0003824 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 SMART SM00481 7 74 1.0E-25 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Gene3D G3DSA:3.20.20.140 1 247 2.2E-39 T 28-03-2018 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Pfam PF01336 OB-fold nucleic acid binding domain 1000 1072 1.8E-8 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 Gene3D G3DSA:2.40.50.140 979 1074 4.9E-16 T 28-03-2018 CI104_RS05370 6a92786bff001d9150dcf3ca299b5e9e 1160 TIGRFAM TIGR00594 polc: DNA polymerase III, alpha subunit 6 1031 0.0 T 28-03-2018 IPR004805 DNA polymerase III, alpha subunit GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF55424 436 559 7.22E-33 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 133 143 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 237 254 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 534 553 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 110 128 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 13 23 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 272 289 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 145 164 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 469 489 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PRINTS PR00945 Mercuric reductase class II signature 292 307 1.7E-92 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 256 305 3.7E-8 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Pfam PF00403 Heavy-metal-associated domain 3 43 8.1E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF55008 2 70 2.62E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.30.70.100 1 69 1.6E-18 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 PIRSF PIRSF000350 1 561 6.5E-264 T 28-03-2018 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 TIGRFAM TIGR02053 MerA: mercury(II) reductase 100 561 9.9E-187 T 28-03-2018 IPR021179 Mercury(II) reductase GO:0016152|GO:0016491|GO:0045340|GO:0050660|GO:0050661|GO:0050787|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 306 435 1.2E-23 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.50.50.60 96 255 2.4E-28 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 437 545 2.0E-28 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 100 418 2.0E-64 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 ProSitePatterns PS01047 Heavy-metal-associated domain. 6 35 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 SUPERFAMILY SSF51905 98 427 5.47E-54 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26605 10dff0d902d36b591b640edc4016c417 561 Gene3D G3DSA:3.30.390.30 436 561 4.4E-35 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS04725 984a180cf877d899d213325389fede68 329 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 3 325 36.315 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CI104_RS04725 984a180cf877d899d213325389fede68 329 SUPERFAMILY SSF53659 5 327 4.64E-116 T 28-03-2018 CI104_RS04725 984a180cf877d899d213325389fede68 329 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 34 321 7.9E-108 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CI104_RS04725 984a180cf877d899d213325389fede68 329 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 324 3.8E-130 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CI104_RS04725 984a180cf877d899d213325389fede68 329 Gene3D G3DSA:3.40.718.10 2 329 6.0E-133 T 28-03-2018 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 PIRSF PIRSF000370 1 223 3.0E-73 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 Pfam PF04055 Radical SAM superfamily 27 181 9.7E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 Gene3D G3DSA:3.20.20.70 24 186 4.5E-12 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 SUPERFAMILY SSF102114 24 119 2.09E-7 T 28-03-2018 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 TIGRFAM TIGR04322 rSAM_QueE_Ecoli: putative 7-cyano-7-deazaguanosine (preQ0) biosynthesis protein QueE 9 223 4.2E-112 T 28-03-2018 IPR027609 Putative 7-carboxy-7-deazaguanine synthase QueE, Proteobacteria KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 Hamap MF_00917 7-carboxy-7-deazaguanine synthase [queE]. 3 223 40.365 T 28-03-2018 IPR024924 7-carboxy-7-deazaguanine synthase-like KEGG: 00790+4.3.99.3|MetaCyc: PWY-6703 CI104_RS20015 ecfb40135e6c0e66e06fe3839f5e24b6 223 Pfam PF13394 4Fe-4S single cluster domain 24 128 1.4E-13 T 28-03-2018 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 Gene3D G3DSA:3.20.20.70 1 220 1.7E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 SUPERFAMILY SSF51569 1 216 1.56E-63 T 28-03-2018 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 50.495 T 28-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 2.3E-86 T 28-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 206 5.4E-45 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS08555 6912b8afceb0d68833d1763ca305b4a1 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS23510 694e954875a32d7260e86af4fe919df4 280 SUPERFAMILY SSF51366 86 261 3.77E-20 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS23510 694e954875a32d7260e86af4fe919df4 280 SUPERFAMILY SSF51366 37 55 3.77E-20 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS23510 694e954875a32d7260e86af4fe919df4 280 Gene3D G3DSA:3.20.20.70 6 164 2.7E-9 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS23510 694e954875a32d7260e86af4fe919df4 280 Gene3D G3DSA:3.20.20.70 165 263 4.9E-13 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Gene3D G3DSA:1.20.1640.10 290 510 3.5E-43 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Gene3D G3DSA:1.20.1640.10 820 1030 2.5E-37 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82693 138 182 9.55E-24 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82693 274 330 9.55E-24 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Gene3D G3DSA:3.30.70.1430 568 672 5.8E-26 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Gene3D G3DSA:3.30.70.1430 38 141 5.7E-28 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 622 636 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 445 468 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 336 359 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 391 415 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 553 570 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 8 32 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 36 54 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 363 384 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 PRINTS PR00702 Acriflavin resistance protein family signature 470 493 9.8E-110 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Gene3D G3DSA:3.30.70.1440 673 769 8.4E-22 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82714 723 809 1.96E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82693 566 672 1.88E-30 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 1 1034 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Gene3D G3DSA:3.30.2090.10 180 275 3.3E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82866 296 497 2.75E-48 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82693 39 132 3.66E-26 T 28-03-2018 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82714 182 272 7.32E-21 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 Pfam PF00873 AcrB/AcrD/AcrF family 1 1027 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS18355 f84796c5c8e3df6c7c80a97e4510cdb3 1037 SUPERFAMILY SSF82866 807 1030 2.35E-44 T 28-03-2018 CI104_RS11420 7f3c4a0a18e74a729c2ee9f6608157d1 231 SUPERFAMILY SSF56037 50 224 2.56E-23 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS11420 7f3c4a0a18e74a729c2ee9f6608157d1 231 Gene3D G3DSA:3.50.40.10 58 215 8.3E-20 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS11420 7f3c4a0a18e74a729c2ee9f6608157d1 231 Pfam PF03483 B3/4 domain 65 192 3.9E-16 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS11420 7f3c4a0a18e74a729c2ee9f6608157d1 231 SMART SM00873 61 217 3.5E-9 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS20065 63d427b60c58eef0ed4b6c493d00002d 380 Gene3D G3DSA:3.90.1510.10 42 276 1.0E-96 T 28-03-2018 IPR018193 Glycerate kinase, flavodoxin-like domain GO:0008887|GO:0031388 CI104_RS20065 63d427b60c58eef0ed4b6c493d00002d 380 Pfam PF02595 Glycerate kinase family 3 373 5.4E-150 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS20065 63d427b60c58eef0ed4b6c493d00002d 380 SUPERFAMILY SSF110738 1 375 7.85E-143 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS20065 63d427b60c58eef0ed4b6c493d00002d 380 PIRSF PIRSF006078 1 378 2.0E-139 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS20065 63d427b60c58eef0ed4b6c493d00002d 380 TIGRFAM TIGR00045 TIGR00045: glycerate kinase 2 375 1.8E-163 T 28-03-2018 IPR004381 Glycerate kinase GO:0008887|GO:0031388 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 Hamap MF_00815 ATP synthase gamma chain [atpG]. 1 287 36.437 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 Gene3D G3DSA:1.10.287.80 2 41 2.9E-18 T 28-03-2018 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 Gene3D G3DSA:1.10.287.80 240 282 5.3E-14 T 28-03-2018 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 ProSitePatterns PS00153 ATP synthase gamma subunit signature. 273 286 - T 28-03-2018 IPR023632 ATP synthase, F1 complex, gamma subunit conserved site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 Pfam PF00231 ATP synthase 5 286 2.0E-95 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 SUPERFAMILY SSF52943 2 287 5.1E-97 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 PRINTS PR00126 ATP synthase gamma subunit signature 265 286 3.4E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 PRINTS PR00126 ATP synthase gamma subunit signature 166 183 3.4E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 PRINTS PR00126 ATP synthase gamma subunit signature 234 253 3.4E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 PRINTS PR00126 ATP synthase gamma subunit signature 73 92 3.4E-37 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 Gene3D G3DSA:3.40.1380.10 42 239 2.6E-74 T 28-03-2018 CI104_RS25180 4e8be8e36d70a4f93ac2ecd648e2a796 287 TIGRFAM TIGR01146 ATPsyn_F1gamma: ATP synthase F1, gamma subunit 1 287 2.9E-112 T 28-03-2018 IPR000131 ATP synthase, F1 complex, gamma subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS07175 2a93a8be373e6639de67fd12fc8ee500 371 SUPERFAMILY SSF55931 4 369 6.54E-110 T 28-03-2018 CI104_RS07175 2a93a8be373e6639de67fd12fc8ee500 371 Hamap MF_01609 Glutamate--cysteine ligase [gshA]. 1 371 93.36 T 28-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CI104_RS07175 2a93a8be373e6639de67fd12fc8ee500 371 Pfam PF04107 Glutamate-cysteine ligase family 2(GCS2) 14 292 8.0E-88 T 28-03-2018 IPR006336 Glutamate--cysteine ligase, GCS2 GO:0004357|GO:0042398 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CI104_RS07175 2a93a8be373e6639de67fd12fc8ee500 371 TIGRFAM TIGR02050 gshA_cyan_rel: carboxylate-amine ligase, YbdK family 13 295 6.0E-115 T 28-03-2018 IPR011793 Putative glutamate--cysteine ligase YbdK GO:0016879 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CI104_RS15300 0ab555ea2bbc3c8a045b1337e28b4e3f 96 Pfam PF07130 YebG protein 1 74 2.9E-34 T 28-03-2018 IPR009813 Uncharacterised protein family YebG CI104_RS15300 0ab555ea2bbc3c8a045b1337e28b4e3f 96 Gene3D G3DSA:1.10.10.710 22 83 1.5E-26 T 28-03-2018 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 SUPERFAMILY SSF48695 38 472 2.54E-162 T 28-03-2018 IPR011031 Multihaem cytochrome CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 TIGRFAM TIGR03152 cyto_c552_HCOOH: formate-dependent cytochrome c nitrite reductase, c552 subunit 38 475 9.7E-248 T 28-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 Gene3D G3DSA:1.10.468.10 215 302 1.0E-22 T 28-03-2018 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 Hamap MF_01182 Cytochrome c-552 [nrfA]. 1 477 58.771 T 28-03-2018 IPR017570 Formate-dependent cytochrome c nitrite reductase, c552 subunit GO:0005509|GO:0006807|GO:0020037|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 Pfam PF02335 Cytochrome c552 43 472 5.2E-175 T 28-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 Gene3D G3DSA:1.20.140.10 304 444 2.0E-43 T 28-03-2018 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 PIRSF PIRSF000243 23 478 6.0E-125 T 28-03-2018 IPR003321 Cytochrome c552 GO:0006807|GO:0042279|GO:0042597|GO:0055114 KEGG: 00910+1.7.2.2|MetaCyc: PWY-5674 CI104_RS23190 590ded18d70a72d4007193b4d0364917 478 Gene3D G3DSA:3.90.10.10 79 214 1.6E-8 T 28-03-2018 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Pfam PF02837 Glycosyl hydrolases family 2, sugar binding domain 53 219 4.5E-64 T 28-03-2018 IPR006104 Glycosyl hydrolases family 2, sugar binding domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Gene3D G3DSA:2.60.40.10 626 733 1.7E-23 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Gene3D G3DSA:2.60.120.260 4 219 4.9E-66 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Gene3D G3DSA:2.60.40.10 220 334 4.3E-19 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Pfam PF02836 Glycosyl hydrolases family 2, TIM barrel domain 337 629 1.1E-121 T 28-03-2018 IPR006103 Glycoside hydrolase family 2, catalytic domain GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 532 547 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 376 394 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 448 463 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 345 359 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 PRINTS PR00132 Glycosyl hydrolase family 2 signature 147 162 3.2E-38 T 28-03-2018 IPR006101 Glycoside hydrolase, family 2 GO:0004553|GO:0005975 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 SMART SM01038 752 1025 3.1E-117 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 SUPERFAMILY SSF49303 221 334 8.63E-26 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Hamap MF_01687 Beta-galactosidase [lacZ]. 6 1025 17.412 T 28-03-2018 IPR023933 Glycoside hydrolase, family 2, beta-galactosidase GO:0016798 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 SUPERFAMILY SSF49303 622 730 1.62E-29 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 ProSitePatterns PS00608 Glycosyl hydrolases family 2 acid/base catalyst. 448 462 - T 28-03-2018 IPR023232 Glycoside hydrolase, family 2, active site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 ProSitePatterns PS00719 Glycosyl hydrolases family 2 signature 1. 386 411 - T 28-03-2018 IPR023230 Glycoside hydrolase, family 2, conserved site KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807|Reactome: R-HSA-2024096|Reactome: R-HSA-2160916|Reactome: R-HSA-6798695 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Gene3D G3DSA:3.20.20.80 335 625 2.6E-87 T 28-03-2018 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Pfam PF16353 Domain of unknown function(DUF4981) 640 726 8.0E-19 T 28-03-2018 IPR032312 Beta-galactosidase, domain 4 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Gene3D G3DSA:2.70.98.10 735 1024 3.1E-76 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 SUPERFAMILY SSF51445 336 625 4.06E-104 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS05920 58e701d20097db025dbae677645b1355 1025 SUPERFAMILY SSF74650 740 1024 7.53E-93 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Pfam PF02929 Beta galactosidase small chain 758 1023 2.7E-60 T 28-03-2018 IPR004199 Beta galactosidase small chain/ domain 5 GO:0004565|GO:0005975|GO:0009341 KEGG: 00052+3.2.1.23|KEGG: 00511+3.2.1.23|KEGG: 00531+3.2.1.23|KEGG: 00600+3.2.1.23|KEGG: 00604+3.2.1.23|MetaCyc: PWY-6807 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 Pfam PF00703 Glycosyl hydrolases family 2 222 334 3.4E-14 T 28-03-2018 IPR006102 Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich GO:0004553|GO:0005975 CI104_RS05920 58e701d20097db025dbae677645b1355 1025 SUPERFAMILY SSF49785 15 218 7.23E-67 T 28-03-2018 IPR008979 Galactose-binding domain-like CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 SUPERFAMILY SSF52317 254 456 8.89E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 Gene3D G3DSA:3.40.50.880 252 497 1.5E-34 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 447 3.9E-61 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 Hamap MF_00028 Cobyric acid synthase [cobQ]. 1 502 189.655 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 SUPERFAMILY SSF52540 1 228 1.19E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 TIGRFAM TIGR00313 cobQ: cobyric acid synthase CobQ 5 494 1.6E-163 T 28-03-2018 IPR004459 Cobyric acid synthase CobQ GO:0003824|GO:0009236 CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 Pfam PF13500 AAA domain 3 227 3.3E-21 T 28-03-2018 CI104_RS16090 a9fa8cc14e1c2fd25d8c67d43dc3e2c3 506 Gene3D G3DSA:3.40.50.300 1 240 2.2E-49 T 28-03-2018 CI104_RS27690 3d7da628694a5abf121c2227c4a09a29 184 SUPERFAMILY SSF52833 73 172 6.81E-9 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS27690 3d7da628694a5abf121c2227c4a09a29 184 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 4 175 3.1E-62 T 28-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB CI104_RS27690 3d7da628694a5abf121c2227c4a09a29 184 Pfam PF13728 F plasmid transfer operon protein 75 162 1.8E-10 T 28-03-2018 CI104_RS27690 3d7da628694a5abf121c2227c4a09a29 184 Gene3D G3DSA:3.40.30.10 51 178 3.0E-7 T 28-03-2018 CI104_RS05530 ec013df31abd8abfab7d05498f33c04b 242 TIGRFAM TIGR00573 dnaq: exonuclease, DNA polymerase III, epsilon subunit family 6 224 9.2E-97 T 28-03-2018 IPR006054 DNA polymerase III epsilon subunit, exonuclease domain GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS05530 ec013df31abd8abfab7d05498f33c04b 242 TIGRFAM TIGR01406 dnaQ_proteo: DNA polymerase III, epsilon subunit 7 241 9.3E-96 T 28-03-2018 IPR006309 DNA polymerase 3, epsilon subunit GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS05530 ec013df31abd8abfab7d05498f33c04b 242 SUPERFAMILY SSF53098 7 183 1.12E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS05530 ec013df31abd8abfab7d05498f33c04b 242 Pfam PF00929 Exonuclease 9 175 2.6E-41 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS05530 ec013df31abd8abfab7d05498f33c04b 242 Gene3D G3DSA:3.30.420.10 1 191 1.6E-40 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS05530 ec013df31abd8abfab7d05498f33c04b 242 SMART SM00479 7 184 1.5E-51 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 SUPERFAMILY SSF56935 26 612 2.26E-111 T 28-03-2018 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 595 612 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 Hamap MF_01531 Vitamin B12 transporter BtuB [btuB]. 2 612 34.606 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 146 4.3E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 Pfam PF00593 TonB dependent receptor 176 611 6.8E-41 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 TIGRFAM TIGR01779 TonB-B12: TonB-dependent vitamin B12 receptor 2 612 6.0E-203 T 28-03-2018 IPR010101 TonB-dependent vitamin B12 transporter BtuB GO:0004872|GO:0015235|GO:0015889|GO:0016020 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 Gene3D G3DSA:2.40.170.20 154 612 5.0E-65 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 Gene3D G3DSA:2.170.130.10 19 152 7.6E-34 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS23885 ca5b3ea06c591a7a06be156f08322732 612 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 33 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 SUPERFAMILY SSF103190 35 158 9.02E-14 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 Gene3D G3DSA:3.30.565.10 312 468 4.6E-45 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 SMART SM00388 246 312 3.2E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 Pfam PF00512 His Kinase A (phospho-acceptor) domain 246 308 7.3E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 Gene3D G3DSA:3.30.450.20 31 163 6.3E-11 T 28-03-2018 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 Gene3D G3DSA:1.10.287.130 233 308 8.2E-14 T 28-03-2018 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 355 460 2.7E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 SUPERFAMILY SSF55874 311 461 3.41E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 421 439 2.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 420 2.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 392 406 2.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 458 2.2E-19 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 SMART SM00387 354 461 2.2E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS23670 c6e326607b7a35916d710d7ba4dce41b 468 SUPERFAMILY SSF47384 236 308 3.73E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS11835 498b3e11e7ae1a201b4a74b5bf5af0e4 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 94 9.4E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS11835 498b3e11e7ae1a201b4a74b5bf5af0e4 106 Gene3D G3DSA:3.40.50.2300 5 106 8.8E-29 T 28-03-2018 CI104_RS11835 498b3e11e7ae1a201b4a74b5bf5af0e4 106 TIGRFAM TIGR00853 pts-lac: PTS system, lactose/cellobiose family IIB component 1 94 2.1E-33 T 28-03-2018 IPR013012 Phosphotransferase system, EIIB component, type 3 GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CI104_RS11835 498b3e11e7ae1a201b4a74b5bf5af0e4 106 SUPERFAMILY SSF52794 4 102 4.71E-32 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS01440 5c6f4284c9d0a497403fa65b55d5ce03 127 Hamap MF_02018 PanD maturation factor [panM]. 1 126 31.72 T 28-03-2018 IPR032900 PanD regulatory factor PanM GO:0015940|GO:0031638 CI104_RS01440 5c6f4284c9d0a497403fa65b55d5ce03 127 Gene3D G3DSA:3.40.630.30 1 127 6.6E-11 T 28-03-2018 CI104_RS01440 5c6f4284c9d0a497403fa65b55d5ce03 127 Pfam PF12568 Acetyltransferase (GNAT) domain 2 125 2.4E-47 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS01440 5c6f4284c9d0a497403fa65b55d5ce03 127 SUPERFAMILY SSF55729 18 120 3.09E-8 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Pfam PF08299 Bacterial dnaA protein helix-turn-helix 378 446 1.3E-32 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 SUPERFAMILY SSF52540 135 345 2.22E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 TIGRFAM TIGR00362 DnaA: chromosomal replication initiator protein DnaA 6 467 2.6E-187 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Hamap MF_00377 Chromosomal replication initiator protein DnaA [dnaA]. 3 468 34.465 T 28-03-2018 IPR001957 Chromosomal replication control, initiator DnaA GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Pfam PF00308 Bacterial dnaA protein 135 351 4.0E-99 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 SUPERFAMILY SSF48295 365 468 4.45E-38 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Gene3D G3DSA:1.10.8.60 300 371 7.1E-28 T 28-03-2018 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Pfam PF11638 DnaA N-terminal domain 4 64 2.0E-20 T 28-03-2018 IPR024633 DnaA N-terminal domain CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 ProSitePatterns PS01008 DnaA protein signature. 427 446 - T 28-03-2018 IPR018312 Chromosomal replication control, initiator DnaA, conserved site GO:0003677|GO:0003688|GO:0005524|GO:0006270|GO:0006275 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 427 446 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 265 292 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 167 187 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 231 245 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 199 213 1.7E-54 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 SMART SM00382 166 368 4.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Gene3D G3DSA:3.40.50.300 131 298 1.7E-21 T 28-03-2018 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 SMART SM00760 377 446 6.7E-45 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CI104_RS00005 d59188ac2c8a995ac7049b6860fe8952 469 Gene3D G3DSA:1.10.1750.10 372 468 2.5E-36 T 28-03-2018 IPR013159 Chromosomal replication initiator, DnaA C-terminal GO:0005524|GO:0006270|GO:0006275|GO:0043565 CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 SUPERFAMILY SSF51735 3 253 1.75E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 Gene3D G3DSA:3.40.50.720 2 255 7.7E-52 T 28-03-2018 CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 182 0.0058 T 28-03-2018 CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 Pfam PF00106 short chain dehydrogenase 3 191 2.7E-38 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 5.0E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 5.0E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 184 5.0E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 120 136 5.0E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 146 165 5.0E-18 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS06935 c5f324332aa4558aa47d3d0b171354c7 256 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 133 161 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 Pfam PF10423 Bacterial AMP nucleoside phosphorylase N-terminus 12 166 6.1E-52 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 Hamap MF_01932 AMP nucleosidase [amn]. 3 484 59.254 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 Gene3D G3DSA:3.40.50.1580 174 467 8.1E-69 T 28-03-2018 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 Gene3D G3DSA:3.30.1730.10 6 170 2.3E-51 T 28-03-2018 IPR018953 AMP nucleoside phosphorylase, N-terminal KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 Pfam PF01048 Phosphorylase superfamily 267 431 1.9E-18 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 SUPERFAMILY SSF53167 9 484 2.36E-158 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS16015 503859e19b1bdda766c5ad77a0bac2cc 484 TIGRFAM TIGR01717 AMP-nucleosdse: AMP nucleosidase 11 484 3.3E-242 T 28-03-2018 IPR011271 AMP nucleosidase GO:0008714|GO:0009116|GO:0044209 KEGG: 00230+3.2.2.4|MetaCyc: PWY-6617 CI104_RS03525 9e127b361bdd78eabf550604959450f5 67 Pfam PF05489 Phage Tail Protein X 1 59 1.6E-32 T 28-03-2018 IPR008861 Phage Tail Protein X-like CI104_RS22785 47a7be2023659d364acdf5c61c65265f 840 Pfam PF13954 PapC N-terminal domain 45 190 3.6E-39 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS22785 47a7be2023659d364acdf5c61c65265f 840 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 321 331 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CI104_RS22785 47a7be2023659d364acdf5c61c65265f 840 SUPERFAMILY SSF141729 44 165 2.09E-30 T 28-03-2018 CI104_RS22785 47a7be2023659d364acdf5c61c65265f 840 Pfam PF13953 PapC C-terminal domain 766 820 9.0E-14 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS22785 47a7be2023659d364acdf5c61c65265f 840 Pfam PF00577 Outer membrane usher protein 207 754 7.4E-186 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 7.9E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 7.9E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 7.9E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 Gene3D G3DSA:3.40.50.720 8 240 6.6E-37 T 28-03-2018 CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 SUPERFAMILY SSF51735 9 239 5.11E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 18 238 1.1E-24 T 28-03-2018 CI104_RS12605 b0b0891d87a5902dd7a0cc8e5da2ee56 240 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 SUPERFAMILY SSF58104 236 520 1.7E-76 T 28-03-2018 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 SUPERFAMILY SSF47170 25 181 3.92E-52 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 444 473 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 191 211 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 396 425 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 290 319 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 60 75 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 367 394 1.7E-92 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 Gene3D G3DSA:1.10.287.950 321 520 6.4E-48 T 28-03-2018 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 Pfam PF00672 HAMP domain 217 265 1.3E-11 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 SMART SM00283 269 516 3.4E-97 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 SMART SM00319 44 182 2.5E-70 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 Pfam PF02203 Tar ligand binding domain homologue 1 176 5.4E-58 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 Gene3D G3DSA:1.20.120.30 23 190 2.3E-47 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 327 484 5.4E-61 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 Gene3D G3DSA:1.10.287.950 222 320 2.9E-14 T 28-03-2018 CI104_RS21365 b9799d4567eb78d08e6f3ad4ed5c0227 554 SMART SM00304 216 268 6.2E-13 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS14320 821d23fa90e66c7c6cf1a2b59d98df01 302 ProSitePatterns PS01237 Uncharacterized protein family UPF0028 signature. 11 43 - T 28-03-2018 IPR001423 Lysophospholipase patatin, conserved site GO:0004622|GO:0046470 Reactome: R-HSA-6814848 CI104_RS14320 821d23fa90e66c7c6cf1a2b59d98df01 302 Gene3D G3DSA:3.40.1090.10 2 290 2.8E-41 T 28-03-2018 CI104_RS14320 821d23fa90e66c7c6cf1a2b59d98df01 302 Pfam PF01734 Patatin-like phospholipase 8 165 1.0E-22 T 28-03-2018 IPR002641 Patatin-like phospholipase domain GO:0006629 CI104_RS14320 821d23fa90e66c7c6cf1a2b59d98df01 302 SUPERFAMILY SSF52151 1 296 9.94E-60 T 28-03-2018 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase GO:0008152 CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 SUPERFAMILY SSF52833 1 72 1.37E-18 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 Gene3D G3DSA:3.40.30.10 1 101 1.9E-14 T 28-03-2018 CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 Gene3D G3DSA:1.20.1050.10 102 215 1.9E-32 T 28-03-2018 CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 SUPERFAMILY SSF47616 76 215 1.46E-47 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 Pfam PF04399 Glutaredoxin 2, C terminal domain 86 214 2.3E-49 T 28-03-2018 IPR007494 Glutaredoxin 2, C-terminal CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 TIGRFAM TIGR02182 GRXB: glutaredoxin, GrxB family 2 210 4.1E-99 T 28-03-2018 IPR011901 Glutaredoxin-2 GO:0005829|GO:0097573 CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 ProSitePatterns PS00195 Glutaredoxin active site. 3 18 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CI104_RS10375 5e628d44928c23d0bd044144e44defe2 215 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 74 3.2E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 697 726 6.9E-11 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 Pfam PF12951 Passenger-associated-transport-repeat 698 725 3.8E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 Pfam PF03797 Autotransporter beta-domain 982 1241 1.3E-48 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 SUPERFAMILY SSF103515 945 1263 4.45E-45 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 Gene3D G3DSA:2.40.128.130 937 1263 5.3E-48 T 28-03-2018 CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 800 1263 3.5E-111 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 SUPERFAMILY SSF51126 505 754 2.42E-30 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 SUPERFAMILY SSF51126 783 908 2.42E-30 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 SMART SM00869 979 1252 5.6E-39 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 Gene3D G3DSA:2.160.20.20 614 912 1.2E-41 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS05935 cf1c9eeae92a3e66b3dde0bd0f0208de 1263 Pfam PF03212 Pertactin 788 906 6.0E-6 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS13155 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Pfam PF13592 Winged helix-turn helix 108 157 3.6E-6 T 28-03-2018 IPR025959 Winged helix-turn helix domain CI104_RS13155 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Pfam PF13384 Homeodomain-like domain 28 73 3.8E-10 T 28-03-2018 CI104_RS13155 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Pfam PF13358 DDE superfamily endonuclease 177 316 2.0E-24 T 28-03-2018 CI104_RS13155 1d0282a147ad9260dd5ef4c4bb4a98b4 343 SUPERFAMILY SSF46689 17 140 7.26E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13155 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Gene3D G3DSA:3.30.420.10 202 330 5.5E-9 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS13155 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Gene3D G3DSA:1.10.10.10 11 85 9.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27665 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Pfam PF13592 Winged helix-turn helix 108 157 3.6E-6 T 28-03-2018 IPR025959 Winged helix-turn helix domain CI104_RS27665 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Pfam PF13384 Homeodomain-like domain 28 73 3.8E-10 T 28-03-2018 CI104_RS27665 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Pfam PF13358 DDE superfamily endonuclease 177 316 2.0E-24 T 28-03-2018 CI104_RS27665 1d0282a147ad9260dd5ef4c4bb4a98b4 343 SUPERFAMILY SSF46689 17 140 7.26E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27665 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Gene3D G3DSA:3.30.420.10 202 330 5.5E-9 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS27665 1d0282a147ad9260dd5ef4c4bb4a98b4 343 Gene3D G3DSA:1.10.10.10 11 85 9.8E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 PIRSF PIRSF036918 1 604 6.7E-236 T 28-03-2018 IPR017069 Maltodextrin glucosidase GO:0004558|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.20|KEGG: 00500+3.2.1.20|MetaCyc: PWY-842 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 Gene3D G3DSA:2.60.40.10 5 111 3.3E-8 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 Gene3D G3DSA:2.60.40.1180 552 601 0.0018 T 28-03-2018 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 SUPERFAMILY SSF51445 117 530 8.19E-86 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 SMART SM00642 127 521 1.3E-86 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 SUPERFAMILY SSF81296 11 103 7.0E-7 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 Gene3D G3DSA:3.20.20.80 115 510 5.2E-85 T 28-03-2018 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 SUPERFAMILY SSF51011 530 603 2.93E-9 T 28-03-2018 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 Pfam PF02903 Alpha amylase, N-terminal ig-like domain 1 104 6.4E-8 T 28-03-2018 IPR004185 Glycoside hydrolase, family 13, N-terminal Ig-like domain GO:0004553|GO:0005975 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 Gene3D G3DSA:3.20.20.80 511 551 1.4E-7 T 28-03-2018 CI104_RS06150 afc2de696c34adb6916308efd2e41242 605 Pfam PF00128 Alpha amylase, catalytic domain 177 493 1.3E-86 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 Gene3D G3DSA:1.10.10.10 2 93 1.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 1.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 3.7E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 Gene3D G3DSA:3.40.190.10 97 183 2.6E-8 T 28-03-2018 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 SUPERFAMILY SSF53850 94 302 6.15E-39 T 28-03-2018 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 Pfam PF03466 LysR substrate binding domain 94 298 7.2E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 Gene3D G3DSA:3.40.190.10 184 270 6.0E-22 T 28-03-2018 CI104_RS10485 21150aec0294d12da6b47b1716bcecab 311 SUPERFAMILY SSF46785 5 115 1.99E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18860 23d54d53c09690b17d1e4a01b823e3a1 245 Pfam PF05175 Methyltransferase small domain 46 129 8.5E-11 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS18860 23d54d53c09690b17d1e4a01b823e3a1 245 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 119 125 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS18860 23d54d53c09690b17d1e4a01b823e3a1 245 Gene3D G3DSA:3.40.50.150 32 239 3.4E-26 T 28-03-2018 CI104_RS18860 23d54d53c09690b17d1e4a01b823e3a1 245 Hamap MF_01872 tRNA1(Val) (adenine(37)-N6)-methyltransferase [yfiC]. 11 245 53.255 T 28-03-2018 IPR022882 tRNA1(Val) (adenine(37)-N6)-methyltransferase GO:0016430 KEGG: 00340+2.1.1.22 CI104_RS18860 23d54d53c09690b17d1e4a01b823e3a1 245 SUPERFAMILY SSF53335 15 171 8.73E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS10755 624979072bda157b2398aaed07f4b520 273 TIGRFAM TIGR01641 phageSPP1_gp7: phage head morphogenesis protein, SPP1 gp7 family 114 192 8.7E-15 T 28-03-2018 IPR006528 Phage head morphogenesis domain CI104_RS10755 624979072bda157b2398aaed07f4b520 273 Pfam PF04233 Phage Mu protein F like protein 59 189 5.3E-29 T 28-03-2018 IPR006528 Phage head morphogenesis domain CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 SMART SM00304 224 278 7.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 300 329 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 377 404 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 74 89 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 199 219 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 406 435 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 454 483 1.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 Gene3D G3DSA:1.20.120.30 52 184 2.2E-22 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 SUPERFAMILY SSF47170 39 186 7.85E-31 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 Pfam PF02203 Tar ligand binding domain homologue 19 180 2.6E-32 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 SUPERFAMILY SSF58104 254 527 1.44E-51 T 28-03-2018 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 Gene3D G3DSA:1.10.287.950 309 529 2.3E-40 T 28-03-2018 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 SMART SM00283 279 526 1.1E-40 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS12905 0c62e2c67a5008f86fce7afc07af3dbb 529 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 491 9.7E-36 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS09755 85c138b0c3db2aa6cc6d958116ed9553 1097 Pfam PF06744 Type VI secretion protein IcmF C-terminal 822 1019 4.0E-54 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CI104_RS09755 85c138b0c3db2aa6cc6d958116ed9553 1097 Pfam PF06761 Intracellular multiplication and human macrophage-killing 371 688 3.2E-70 T 28-03-2018 IPR009612 ImcF-related CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 Gene3D G3DSA:2.40.50.230 341 423 1.6E-37 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 SUPERFAMILY SSF69279 179 336 4.59E-33 T 28-03-2018 CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 42 472 4.1E-121 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 SUPERFAMILY SSF69255 337 423 7.85E-32 T 28-03-2018 CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 Pfam PF05954 Phage late control gene D protein (GPD) 27 310 9.2E-78 T 28-03-2018 CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 Gene3D G3DSA:3.55.50.10 86 177 2.0E-33 T 28-03-2018 CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 Pfam PF06715 Gp5 C-terminal repeat (3 copies) 546 569 1.1E-7 T 28-03-2018 IPR010609 Gp5, C-terminal CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 SUPERFAMILY SSF69279 23 173 4.25E-44 T 28-03-2018 CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 36 489 1.0E-167 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CI104_RS21600 67c62a5f595ada251d266acca1981f44 652 SUPERFAMILY SSF69349 414 619 6.67E-44 T 28-03-2018 CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 Gene3D G3DSA:1.10.10.10 4 81 1.9E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 Gene3D G3DSA:3.40.190.10 175 258 4.4E-24 T 28-03-2018 CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 SUPERFAMILY SSF53850 88 293 1.99E-45 T 28-03-2018 CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 63 4.6E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 Gene3D G3DSA:3.40.190.10 86 174 1.1E-20 T 28-03-2018 CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 SUPERFAMILY SSF46785 8 110 2.02E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12125 5e288a00c650563c57f603f09317f1dc 295 Pfam PF03466 LysR substrate binding domain 88 290 2.0E-44 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS11290 a24e89f8f679ae4b199b75f5b7229979 245 Pfam PF02368 Bacterial Ig-like domain (group 2) 161 240 8.8E-12 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 CI104_RS11290 a24e89f8f679ae4b199b75f5b7229979 245 SUPERFAMILY SSF49373 159 244 1.96E-9 T 28-03-2018 IPR008964 Invasin/intimin cell-adhesion fragments CI104_RS11290 a24e89f8f679ae4b199b75f5b7229979 245 Pfam PF16461 Lambda phage tail tube protein, TTP 4 154 4.5E-65 T 28-03-2018 IPR032494 Lambda phage tail tube protein CI104_RS11290 a24e89f8f679ae4b199b75f5b7229979 245 SMART SM00635 161 241 3.1E-14 T 28-03-2018 IPR003343 Bacterial Ig-like, group 2 CI104_RS11290 a24e89f8f679ae4b199b75f5b7229979 245 Gene3D G3DSA:2.60.40.1080 157 245 8.8E-14 T 28-03-2018 CI104_RS03570 763ce5f53c9c963d632cdea0315c3007 119 Gene3D G3DSA:3.10.450.40 2 118 7.4E-25 T 28-03-2018 CI104_RS03570 763ce5f53c9c963d632cdea0315c3007 119 Pfam PF04965 Gene 25-like lysozyme 18 96 6.7E-14 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CI104_RS03570 763ce5f53c9c963d632cdea0315c3007 119 SUPERFAMILY SSF160719 12 113 1.22E-26 T 28-03-2018 CI104_RS14415 283dbc8f698a75da63ba2cf725dbac9e 284 Gene3D G3DSA:3.20.20.70 17 280 5.0E-67 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14415 283dbc8f698a75da63ba2cf725dbac9e 284 Hamap MF_00056 2-dehydro-3-deoxyphosphooctonate aldolase [kdsA]. 13 277 49.543 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS14415 283dbc8f698a75da63ba2cf725dbac9e 284 Pfam PF00793 DAHP synthetase I family 10 275 3.3E-68 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS14415 283dbc8f698a75da63ba2cf725dbac9e 284 SUPERFAMILY SSF51569 3 277 1.74E-103 T 28-03-2018 CI104_RS14415 283dbc8f698a75da63ba2cf725dbac9e 284 TIGRFAM TIGR01362 KDO8P_synth: 3-deoxy-8-phosphooctulonate synthase 18 275 6.0E-119 T 28-03-2018 IPR006269 3-deoxy-8-phosphooctulonate synthase GO:0005737|GO:0008152|GO:0008676 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS19325 a16fd8cb9be9bd506f86b3bf9ba62f6e 237 Pfam PF13280 WYL domain 129 196 3.1E-8 T 28-03-2018 IPR026881 WYL domain CI104_RS19325 a16fd8cb9be9bd506f86b3bf9ba62f6e 237 Gene3D G3DSA:1.10.10.10 1 78 1.6E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19325 a16fd8cb9be9bd506f86b3bf9ba62f6e 237 ProSitePatterns PS00894 DeoR-type HTH domain signature. 14 48 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 147 193 9.8E-10 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 Gene3D G3DSA:2.160.20.20 16 514 1.1E-41 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 SUPERFAMILY SSF51126 44 515 3.11E-36 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 Gene3D G3DSA:2.40.128.130 545 867 3.2E-57 T 28-03-2018 CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 Pfam PF03212 Pertactin 387 508 3.9E-11 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 SUPERFAMILY SSF103515 550 867 5.75E-54 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 330 358 1.3E-8 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 410 867 4.6E-125 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 Pfam PF03797 Autotransporter beta-domain 590 845 1.2E-53 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS12730 7b5155f54c5c8af00dd5fe7948074206 867 SMART SM00869 587 856 1.2E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS19890 9f35593f904cee0a36cbc4e2b7d72d04 282 SUPERFAMILY SSF81345 4 262 6.8E-38 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS19890 9f35593f904cee0a36cbc4e2b7d72d04 282 Pfam PF00950 ABC 3 transport family 11 266 1.7E-78 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CI104_RS19890 9f35593f904cee0a36cbc4e2b7d72d04 282 Gene3D G3DSA:1.10.3470.10 3 278 5.6E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 Pfam PF06276 Ferric iron reductase FhuF-like transporter 93 237 2.8E-29 T 28-03-2018 IPR022770 Ferric iron reductase FhuF domain CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 TIGRFAM TIGR03951 Fe_III_red_FhuF: siderophore-iron reductase FhuF 87 262 1.5E-66 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 197 212 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 16 32 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 56 73 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 173 189 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 93 108 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 215 231 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 241 259 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 PRINTS PR01714 Ferric iron reductase signature 125 139 2.0E-67 T 28-03-2018 IPR008090 Ferric iron reductase CI104_RS21265 d18fc614847caa8462575c4d3bcdcded 262 Pfam PF11575 FhuF 2Fe-2S C-terminal domain 241 261 2.4E-7 T 28-03-2018 IPR024726 Ferric iron reductase, C-terminal GO:0051537 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 PIRSF PIRSF036426 1 457 4.0E-204 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 216 448 1.4E-91 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 296 329 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Hamap MF_01646 Siroheme synthase [cysG]. 1 457 50.942 T 28-03-2018 IPR012409 Sirohaem synthase GO:0004851|GO:0009236|GO:0019354|GO:0043115|GO:0051266|GO:0051287|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Gene3D G3DSA:3.30.950.10 341 457 4.2E-38 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Pfam PF14824 Sirohaem biosynthesis protein central 119 145 1.3E-8 T 28-03-2018 IPR028281 Siroheme synthase, central domain KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 218 426 2.9E-49 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 TIGRFAM TIGR01470 cysG_Nterm: siroheme synthase, N-terminal domain 4 206 1.7E-69 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 SUPERFAMILY SSF53790 215 456 3.4E-78 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Gene3D G3DSA:3.30.160.110 121 148 1.2E-16 T 28-03-2018 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Pfam PF10414 Sirohaem synthase dimerisation region 150 208 5.0E-19 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 SUPERFAMILY SSF75615 114 206 5.49E-27 T 28-03-2018 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Gene3D G3DSA:3.40.50.720 3 120 2.0E-19 T 28-03-2018 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Gene3D G3DSA:1.10.8.210 151 209 5.6E-19 T 28-03-2018 IPR019478 Sirohaem synthase, dimerisation domain GO:0006779|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Gene3D G3DSA:3.40.1010.10 215 340 2.2E-35 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 SUPERFAMILY SSF51735 2 112 4.23E-27 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 221 235 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS01855 9da7f2853b801b0d833c36c51ef9ade0 457 Pfam PF13241 Putative NAD(P)-binding 6 115 7.6E-25 T 28-03-2018 IPR006367 Sirohaem synthase, N-terminal GO:0006779|GO:0019354|GO:0043115|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Gene3D G3DSA:1.10.287.130 280 341 1.7E-17 T 28-03-2018 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Pfam PF01627 Hpt domain 686 758 1.6E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SUPERFAMILY SSF47226 661 773 9.29E-28 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 395 504 2.3E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SMART SM00091 155 221 2.1E-7 T 28-03-2018 IPR000014 PAS domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Pfam PF00989 PAS fold 156 266 5.1E-18 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SMART SM00388 282 347 1.1E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Gene3D G3DSA:1.10.287.970 3 88 7.3E-39 T 28-03-2018 IPR027460 Aerobic respiration control sensor protein ArcB, transmembrane domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 431 445 7.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 449 459 7.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 467 485 7.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 PRINTS PR00344 Bacterial sensor protein C-terminal signature 491 504 7.7E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Gene3D G3DSA:3.30.565.10 342 506 4.8E-44 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 152 276 5.0E-14 T 28-03-2018 IPR000014 PAS domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Gene3D G3DSA:1.20.120.160 646 763 3.5E-17 T 28-03-2018 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SUPERFAMILY SSF55785 140 267 9.77E-21 T 28-03-2018 IPR000014 PAS domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SUPERFAMILY SSF55874 336 503 6.29E-42 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Gene3D G3DSA:3.30.450.20 102 279 1.5E-25 T 28-03-2018 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Pfam PF00072 Response regulator receiver domain 528 639 2.3E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Gene3D G3DSA:3.40.50.2300 515 645 7.2E-30 T 28-03-2018 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SMART SM00387 394 507 7.1E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 Pfam PF00512 His Kinase A (phospho-acceptor) domain 283 346 2.2E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SUPERFAMILY SSF47384 269 347 5.1E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SMART SM00073 675 772 1.6E-20 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SUPERFAMILY SSF52172 526 645 3.27E-27 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 SMART SM00448 526 639 5.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS02655 29de04a82afa31b5f52c7def4198f9dc 778 PIRSF PIRSF003182 1 778 0.0 T 28-03-2018 IPR014409 Signal transduction histidine kinase, hybrid-type, aerobic respiration control ArcB GO:0000155|GO:0000160|GO:0004673|GO:0016021 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 PIRSF PIRSF000414 1 529 1.9E-226 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 SUPERFAMILY SSF52335 7 197 2.35E-72 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 Pfam PF02142 MGS-like domain 19 132 2.9E-30 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 Hamap MF_00139 Bifunctional purine biosynthesis protein PurH [purH]. 7 529 45.419 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 Gene3D G3DSA:3.40.140.20 376 519 5.2E-53 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 Gene3D G3DSA:3.40.140.20 226 375 3.2E-54 T 28-03-2018 IPR024051 AICAR transformylase domain KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 Gene3D G3DSA:3.40.50.1380 1 196 4.8E-79 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 TIGRFAM TIGR00355 purH: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 8 529 8.7E-268 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 SMART SM00798 137 461 1.6E-214 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 SMART SM00851 19 132 5.5E-63 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 SUPERFAMILY SSF53927 221 529 1.91E-129 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS23655 6d1cd492c0732a620b663a71bc5c98de 529 Pfam PF01808 AICARFT/IMPCHase bienzyme 137 460 8.7E-119 T 28-03-2018 IPR002695 AICARFT/IMPCHase bienzyme GO:0003937|GO:0004643|GO:0006164 KEGG: 00230+3.5.4.10+2.1.2.3|KEGG: 00670+2.1.2.3|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 Gene3D G3DSA:2.40.50.100 42 105 1.3E-14 T 28-03-2018 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 SUPERFAMILY SSF111369 176 323 3.01E-13 T 28-03-2018 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 Hamap MF_01304 UPF0194 membrane protein YbhG [ybhG]. 1 327 51.257 T 28-03-2018 IPR022936 Uncharacterised protein family UPF0194, membrane protein YbhG CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 SUPERFAMILY SSF111369 112 170 5.23E-5 T 28-03-2018 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 Gene3D G3DSA:1.20.1600.10 174 305 1.5E-16 T 28-03-2018 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 Gene3D G3DSA:1.10.287.470 110 169 2.7E-11 T 28-03-2018 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 SUPERFAMILY SSF111369 41 98 2.09E-8 T 28-03-2018 CI104_RS08370 092c9d9e3bdd0c42cea64fb369e1cd62 331 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 42 318 9.9E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS02370 082f38cd83a5f7fca69a0b71a9266f1e 483 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 414 434 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS02370 082f38cd83a5f7fca69a0b71a9266f1e 483 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 155 180 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS02370 082f38cd83a5f7fca69a0b71a9266f1e 483 TIGRFAM TIGR02119 panF: sodium/pantothenate symporter 4 470 2.3E-229 T 28-03-2018 IPR011849 Sodium/pantothenate symporter GO:0015081|GO:0015233|GO:0015887|GO:0016021|GO:0031402|GO:0071436 CI104_RS02370 082f38cd83a5f7fca69a0b71a9266f1e 483 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 36 432 6.2E-114 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS02370 082f38cd83a5f7fca69a0b71a9266f1e 483 Pfam PF00474 Sodium:solute symporter family 36 432 3.0E-140 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS11620 08793e006099c77b1fadcf39770b6ee3 294 SUPERFAMILY SSF74650 8 270 6.28E-67 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS11620 08793e006099c77b1fadcf39770b6ee3 294 Gene3D G3DSA:2.70.98.10 1 294 1.6E-64 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS11620 08793e006099c77b1fadcf39770b6ee3 294 PIRSF PIRSF016020 11 294 4.2E-52 T 28-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CI104_RS11620 08793e006099c77b1fadcf39770b6ee3 294 Pfam PF01263 Aldose 1-epimerase 27 274 1.6E-44 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CI104_RS23630 451ce05b497930e78152bf52f3f35c6e 145 Gene3D G3DSA:3.40.630.30 1 145 1.2E-27 T 28-03-2018 CI104_RS23630 451ce05b497930e78152bf52f3f35c6e 145 SUPERFAMILY SSF55729 3 140 2.06E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS23630 451ce05b497930e78152bf52f3f35c6e 145 Pfam PF13673 Acetyltransferase (GNAT) domain 39 128 1.3E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 60 71 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 SUPERFAMILY SSF54862 88 175 7.53E-9 T 28-03-2018 CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 Pfam PF13187 4Fe-4S dicluster domain 59 106 3.7E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 Gene3D G3DSA:3.30.70.20 136 177 1.5E-8 T 28-03-2018 CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 SUPERFAMILY SSF54862 58 111 3.54E-13 T 28-03-2018 CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 Gene3D G3DSA:1.10.1060.10 13 64 5.6E-4 T 28-03-2018 CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 Gene3D G3DSA:3.30.70.20 95 135 7.4E-5 T 28-03-2018 CI104_RS22920 d08002fcc792b4bf9b53f90db7be4bfb 177 Gene3D G3DSA:3.30.70.20 65 94 8.1E-11 T 28-03-2018 CI104_RS11430 561651aad655e023338ed3c3e754b7ff 243 SUPERFAMILY SSF46955 4 85 4.58E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS11430 561651aad655e023338ed3c3e754b7ff 243 SMART SM00422 4 73 1.7E-28 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS11430 561651aad655e023338ed3c3e754b7ff 243 Gene3D G3DSA:1.10.1660.10 1 234 2.9E-25 T 28-03-2018 CI104_RS11430 561651aad655e023338ed3c3e754b7ff 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS11430 561651aad655e023338ed3c3e754b7ff 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 5.7E-20 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 Gene3D G3DSA:3.90.1150.10 5 171 3.1E-48 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 Gene3D G3DSA:3.40.640.10 172 289 1.5E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 SUPERFAMILY SSF53383 12 395 3.36E-125 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 Gene3D G3DSA:3.90.1150.10 290 405 1.4E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 13 397 1.4E-163 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 11 398 44.991 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 5 400 6.2E-221 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 220 257 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 Hamap MF_01173 Succinylornithine transaminase [astC]. 1 406 73.984 T 28-03-2018 IPR026330 Succinylornithine transaminase GO:0006527|GO:0006593|GO:0043825 KEGG: 00330+2.6.1.81 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 PIRSF PIRSF000521 166 400 1.0E-35 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 PIRSF PIRSF000521 26 156 1.3E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS11780 8c6379626c6ff3aafb2fca181b0ff061 406 Pfam PF00202 Aminotransferase class-III 20 394 2.8E-122 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS24580 96da601fcd04cc3ab6e4e7156c11b792 207 Gene3D G3DSA:3.40.30.10 17 207 1.2E-35 T 28-03-2018 CI104_RS24580 96da601fcd04cc3ab6e4e7156c11b792 207 ProSitePatterns PS00194 Thioredoxin family active site. 41 59 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS24580 96da601fcd04cc3ab6e4e7156c11b792 207 SUPERFAMILY SSF52833 20 205 9.76E-48 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS24580 96da601fcd04cc3ab6e4e7156c11b792 207 PIRSF PIRSF001488 1 207 1.9E-90 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CI104_RS24580 96da601fcd04cc3ab6e4e7156c11b792 207 Pfam PF01323 DSBA-like thioredoxin domain 40 196 4.6E-29 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 157 176 9.0E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 86 97 9.0E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 137 145 9.0E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 188 0.0066 T 28-03-2018 CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 250 3.7E-54 T 28-03-2018 CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 Gene3D G3DSA:3.40.50.720 1 38 4.8E-6 T 28-03-2018 CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 Gene3D G3DSA:3.40.50.720 39 252 4.6E-58 T 28-03-2018 CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 178 195 2.2E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 86 97 2.2E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 157 176 2.2E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 2.2E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.2E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 131 147 2.2E-31 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01125 33ea000b611c006d771f06baca9d565c 252 SUPERFAMILY SSF51735 4 251 7.02E-70 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 Gene3D G3DSA:3.40.50.620 1 123 6.0E-33 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 TIGRFAM TIGR03838 queuosine_YadB: glutamyl-queuosine tRNA(Asp) synthetase 6 270 9.1E-112 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 38 51 2.3E-12 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 186 194 2.3E-12 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 23 34 2.3E-12 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 170 180 2.3E-12 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 PRINTS PR00987 Glutamyl-tRNA synthetase signature 9 21 2.3E-12 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 SUPERFAMILY SSF52374 6 286 5.07E-88 T 28-03-2018 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 9 257 4.0E-47 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 Gene3D G3DSA:3.40.50.620 124 222 3.8E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS05170 efdb57623b8cdacbd1361fb3916ae85c 298 Hamap MF_01428 Glutamyl-Q tRNA(Asp) synthetase [gluQ]. 6 290 41.181 T 28-03-2018 IPR022380 Glutamyl-Q tRNA(Asp) synthetase GO:0000166|GO:0006400|GO:0016876 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 Gene3D G3DSA:1.20.1250.20 4 196 2.0E-33 T 28-03-2018 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 Pfam PF07690 Major Facilitator Superfamily 15 405 1.1E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 Gene3D G3DSA:1.20.1250.20 255 468 1.8E-22 T 28-03-2018 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 SUPERFAMILY SSF103473 244 453 1.44E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 SUPERFAMILY SSF103473 8 194 1.44E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 Hamap MF_01577 Putative multidrug resistance protein MdtD [mdtD]. 1 465 49.911 T 28-03-2018 IPR023721 Multidrug resistance protein MdtD, putative CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 135 159 1.8E-7 T 28-03-2018 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 105 125 1.8E-7 T 28-03-2018 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 353 373 1.8E-7 T 28-03-2018 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 396 415 1.8E-7 T 28-03-2018 CI104_RS16620 60793cbd901a876d90c1a21c3ef475f5 470 PRINTS PR01036 Tetracycline resistance protein TetB signature 14 38 1.8E-7 T 28-03-2018 CI104_RS13685 aa65c4029beeae16ba445437175d6086 871 SUPERFAMILY SSF141729 64 186 5.75E-20 T 28-03-2018 CI104_RS13685 aa65c4029beeae16ba445437175d6086 871 Pfam PF00577 Outer membrane usher protein 221 778 1.1E-144 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS13685 aa65c4029beeae16ba445437175d6086 871 Pfam PF13953 PapC C-terminal domain 795 848 2.8E-13 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS13685 aa65c4029beeae16ba445437175d6086 871 Pfam PF13954 PapC N-terminal domain 43 193 1.0E-25 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS03355 f9568e1d852f1d9adab8452e32a62164 53 SUPERFAMILY SSF50249 1 52 1.13E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS03355 f9568e1d852f1d9adab8452e32a62164 53 Pfam PF01588 Putative tRNA binding domain 2 50 3.7E-12 T 28-03-2018 IPR002547 tRNA-binding domain GO:0000049 Reactome: R-HSA-379716 CI104_RS03355 f9568e1d852f1d9adab8452e32a62164 53 Gene3D G3DSA:2.40.50.140 1 53 1.4E-11 T 28-03-2018 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Pfam PF00874 PRD domain 203 286 1.3E-10 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Pfam PF00874 PRD domain 313 402 3.4E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 SUPERFAMILY SSF63520 186 287 3.53E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Gene3D G3DSA:1.10.1790.10 302 406 4.1E-18 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Pfam PF08280 M protein trans-acting positive regulator (MGA) HTH domain 6 52 9.0E-7 T 28-03-2018 IPR013199 M protein trans-acting positive regulator (MGA) HTH domain CI104_RS09880 51886fb8157f596eb508666e882894b4 505 SUPERFAMILY SSF52794 409 486 1.94E-10 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 411 467 7.8E-5 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Gene3D G3DSA:1.10.10.10 85 152 1.5E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Gene3D G3DSA:1.10.10.10 1 69 6.3E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Gene3D G3DSA:1.10.1790.10 192 291 1.9E-14 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 SUPERFAMILY SSF63520 303 405 9.68E-16 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09880 51886fb8157f596eb508666e882894b4 505 Gene3D G3DSA:3.40.50.2300 407 496 1.9E-18 T 28-03-2018 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 TIGRFAM TIGR00136 gidA: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 7 622 0.0 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 Hamap MF_00129 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG [mnmG]. 5 624 42.91 T 28-03-2018 IPR004416 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG GO:0002098 Reactome: R-HSA-6787450 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 SMART SM01228 546 617 1.1E-44 T 28-03-2018 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 Gene3D G3DSA:3.50.50.60 5 264 2.0E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 ProSitePatterns PS01281 Glucose inhibited division protein A family signature 2. 368 391 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 Pfam PF13932 GidA associated domain 403 616 4.8E-78 T 28-03-2018 IPR026904 GidA associated domain 3 Reactome: R-HSA-6787450 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 Pfam PF01134 Glucose inhibited division protein A 8 398 1.8E-170 T 28-03-2018 IPR002218 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG-related GO:0008033|GO:0050660 Reactome: R-HSA-6787450 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 SUPERFAMILY SSF51905 97 261 1.44E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 SUPERFAMILY SSF51905 7 66 1.44E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS25140 8574f7cefd85ae37edb15993441fb211 629 ProSitePatterns PS01280 Glucose inhibited division protein A family signature 1. 273 287 - T 28-03-2018 IPR020595 MnmG-related, conserved site Reactome: R-HSA-6787450 CI104_RS10535 23a0097158583851a08a663053888e91 244 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 6 187 2.9E-5 T 28-03-2018 CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 131 139 3.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 151 170 3.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 78 89 3.7E-15 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 SUPERFAMILY SSF51735 4 243 2.33E-87 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS10535 23a0097158583851a08a663053888e91 244 Gene3D G3DSA:3.40.50.720 159 242 4.0E-27 T 28-03-2018 CI104_RS10535 23a0097158583851a08a663053888e91 244 TIGRFAM TIGR01830 3oxo_ACP_reduc: 3-oxoacyl-[acyl-carrier-protein] reductase 8 242 1.6E-101 T 28-03-2018 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase GO:0004316|GO:0006633|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS10535 23a0097158583851a08a663053888e91 244 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 138 166 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS10535 23a0097158583851a08a663053888e91 244 Gene3D G3DSA:3.40.50.720 2 158 1.7E-51 T 28-03-2018 CI104_RS10535 23a0097158583851a08a663053888e91 244 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 241 6.8E-68 T 28-03-2018 CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 151 170 4.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 125 141 4.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 172 189 4.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 205 225 4.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 4.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS10535 23a0097158583851a08a663053888e91 244 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 4.0E-52 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS03395 76eb6822b016f818e2410115f284fb5f 159 Pfam PF10908 Protein of unknown function (DUF2778) 24 147 1.2E-36 T 28-03-2018 IPR021225 Protein of unknown function DUF2778 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.9E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 Gene3D G3DSA:3.40.190.10 177 261 8.3E-20 T 28-03-2018 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 SUPERFAMILY SSF53850 88 286 7.84E-47 T 28-03-2018 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 Gene3D G3DSA:1.10.10.10 1 84 9.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 Pfam PF03466 LysR substrate binding domain 86 286 2.4E-50 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.1E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 Gene3D G3DSA:3.40.190.10 86 176 4.3E-24 T 28-03-2018 CI104_RS16920 0d7c8aeb82043c8f35121840c96f6a8b 287 SUPERFAMILY SSF46785 2 109 2.23E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 ProDom PD000887 CARRIER ACYL PHOSPHOPANTETHEINE ACP ACID FATTY BIOSYNTHESIS LIPID SYNTHESIS CHLOROPLAST 41 76 4.0E-4 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 Pfam PF00550 Phosphopantetheine attachment site 6 73 7.7E-17 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 SUPERFAMILY SSF47336 2 77 1.44E-24 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 ProSitePatterns PS00012 Phosphopantetheine attachment site. 32 47 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 Hamap MF_01217 Acyl carrier protein [acpP]. 3 77 22.327 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 Gene3D G3DSA:1.10.1200.10 1 78 8.2E-29 T 28-03-2018 CI104_RS10540 10c00c0561de7dcf4030f0d748031d11 78 TIGRFAM TIGR00517 acyl_carrier: acyl carrier protein 1 77 1.1E-38 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 Pfam PF00440 Bacterial regulatory proteins, tetR family 17 62 6.1E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 17 30 2.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 37 60 2.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 ProSitePatterns PS01081 TetR-type HTH domain signature. 29 58 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 Gene3D G3DSA:1.10.357.10 63 224 2.2E-39 T 28-03-2018 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 Gene3D G3DSA:1.10.357.10 47 62 0.012 T 28-03-2018 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 Pfam PF09209 Domain of unknown function (DUF1956) 96 218 4.3E-37 T 28-03-2018 IPR015292 Transcription regulator YbiH, C-terminal CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 SUPERFAMILY SSF46689 3 82 4.05E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 SUPERFAMILY SSF48498 91 219 1.33E-36 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS08375 6dacc05d87a60ca22d869be7ef0c1c74 224 Gene3D G3DSA:1.10.10.60 1 46 1.5E-16 T 28-03-2018 CI104_RS02475 9ca97ea18170f51c480c51f038217cec 162 TIGRFAM TIGR03426 shape_MreD: rod shape-determining protein MreD 9 154 3.3E-42 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CI104_RS02475 9ca97ea18170f51c480c51f038217cec 162 PIRSF PIRSF018472 2 162 4.2E-57 T 28-03-2018 IPR026034 Cell shape-determining protein MreD, proteobacterial type CI104_RS02475 9ca97ea18170f51c480c51f038217cec 162 Pfam PF04093 rod shape-determining protein MreD 5 155 1.0E-45 T 28-03-2018 IPR007227 Cell shape-determining protein MreD GO:0008360|GO:0016021 CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 Gene3D G3DSA:3.10.50.30 45 136 5.5E-23 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 SUPERFAMILY SSF54534 49 127 3.92E-18 T 28-03-2018 CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 PIRSF PIRSF006092 30 128 3.8E-23 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 Gene3D G3DSA:1.10.286.20 3 43 2.2E-12 T 28-03-2018 CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 Hamap MF_00954 Regulator of nucleoside diphosphate kinase [rnk]. 1 136 43.353 T 28-03-2018 IPR028625 Regulator of nucleoside diphosphate kinase GO:0065007|GO:0070063 CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 Pfam PF14760 Rnk N-terminus 4 42 3.5E-11 T 28-03-2018 IPR029462 Regulator of nucleoside diphosphate kinase, N-terminal domain CI104_RS07400 1cd4c59a2ca03f09f1300c69b35f03bf 136 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 50 126 7.6E-20 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CI104_RS28015 ae8c375208df42e3e4dbe1ad3b4673af 297 Pfam PF01609 Transposase DDE domain 152 283 3.6E-19 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CI104_RS28015 ae8c375208df42e3e4dbe1ad3b4673af 297 Pfam PF05598 Transposase domain (DUF772) 63 136 3.0E-21 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS00910 c978c55f5e267360a1226b151ef66e44 249 Gene3D G3DSA:3.20.20.150 1 248 3.6E-26 T 28-03-2018 CI104_RS00910 c978c55f5e267360a1226b151ef66e44 249 SUPERFAMILY SSF51658 3 248 1.04E-58 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 ProSitePatterns PS00461 6-phosphogluconate dehydrogenase signature. 253 265 - T 28-03-2018 IPR006184 6-phosphogluconate-binding site GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 SUPERFAMILY SSF51735 4 173 1.58E-50 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 Pfam PF00393 6-phosphogluconate dehydrogenase, C-terminal domain 179 466 3.1E-133 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 Gene3D G3DSA:3.40.50.720 1 180 5.7E-35 T 28-03-2018 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 SUPERFAMILY SSF48179 177 468 1.26E-130 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 SMART SM01350 179 467 7.5E-222 T 28-03-2018 IPR006114 6-phosphogluconate dehydrogenase, C-terminal GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PIRSF PIRSF000109 1 468 2.0E-241 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 Gene3D G3DSA:1.20.5.320 435 468 8.7E-22 T 28-03-2018 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 TIGRFAM TIGR00873 gnd: 6-phosphogluconate dehydrogenase (decarboxylating) 5 468 1.6E-229 T 28-03-2018 IPR006113 6-phosphogluconate dehydrogenase, decarboxylating GO:0004616|GO:0006098|GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 168 196 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 249 276 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 66 95 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 4 27 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 119 144 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 PRINTS PR00076 6-phosphogluconate dehydrogenase signature 356 378 1.5E-89 T 28-03-2018 IPR006183 6-phosphogluconate dehydrogenase GO:0055114 KEGG: 00030+1.1.1.44|KEGG: 00480+1.1.1.44|Reactome: R-HSA-71336 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 Gene3D G3DSA:1.10.1040.10 181 434 1.2E-110 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS16395 bbbcfdd4d8bdcf23bbc68aa18e71f988 468 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 174 1.3E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS09890 a5c12ae9216bc78ebbc0e3c995e74b06 506 SUPERFAMILY SSF56935 97 506 2.69E-116 T 28-03-2018 CI104_RS09890 a5c12ae9216bc78ebbc0e3c995e74b06 506 Gene3D G3DSA:1.20.5.340 22 105 0.0011 T 28-03-2018 CI104_RS09890 a5c12ae9216bc78ebbc0e3c995e74b06 506 Pfam PF11471 Maltoporin periplasmic N-terminal extension 14 55 3.7E-6 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain CI104_RS09890 a5c12ae9216bc78ebbc0e3c995e74b06 506 Gene3D G3DSA:2.40.170.10 106 506 1.4E-104 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS09890 a5c12ae9216bc78ebbc0e3c995e74b06 506 Pfam PF02264 LamB porin 100 505 5.5E-91 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS09890 a5c12ae9216bc78ebbc0e3c995e74b06 506 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 103 502 9.0E-138 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Pfam PF13193 AMP-binding enzyme C-terminal domain 531 609 2.7E-26 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 TIGRFAM TIGR02188 Ac_CoA_lig_AcsA: acetate--CoA ligase 20 643 0.0 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Gene3D G3DSA:3.40.50.980 267 429 9.8E-39 T 28-03-2018 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Gene3D G3DSA:3.40.50.980 74 266 2.5E-54 T 28-03-2018 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Hamap MF_01123 Acetyl-coenzyme A synthetase [acs]. 2 645 53.09 T 28-03-2018 IPR011904 Acetate-CoA ligase GO:0003987|GO:0016208|GO:0019427 KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857|Reactome: R-HSA-71384 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Pfam PF00501 AMP-binding enzyme 83 522 1.7E-95 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Gene3D G3DSA:2.30.38.10 430 515 2.6E-11 T 28-03-2018 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 SUPERFAMILY SSF56801 11 643 1.03E-190 T 28-03-2018 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Pfam PF16177 Acetyl-coenzyme A synthetase N-terminus 24 81 6.9E-19 T 28-03-2018 IPR032387 Acetyl-coenzyme A synthetase, N-terminal domain KEGG: 00010+6.2.1.1|KEGG: 00620+6.2.1.1|KEGG: 00640+6.2.1.1|KEGG: 00680+6.2.1.1|KEGG: 00720+6.2.1.1|MetaCyc: PWY-5132|MetaCyc: PWY-5133|MetaCyc: PWY-6672|MetaCyc: PWY-7118|MetaCyc: PWY-7857 CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 ProSitePatterns PS00455 Putative AMP-binding domain signature. 261 272 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS23215 df831093ac61ae6fb078f2d26e29e2f2 652 Gene3D G3DSA:3.30.300.30 518 650 4.3E-28 T 28-03-2018 CI104_RS16035 3aaf9737caa87240c0a7b3b3020ea4a8 1299 Gene3D G3DSA:3.40.50.300 11 820 2.6E-7 T 28-03-2018 CI104_RS02805 276280cabe0b68e98c63414a61461c7c 97 SMART SM01103 3 86 6.4E-41 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CI104_RS02805 276280cabe0b68e98c63414a61461c7c 97 Pfam PF01985 CRS1 / YhbY (CRM) domain 3 86 2.7E-22 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CI104_RS02805 276280cabe0b68e98c63414a61461c7c 97 TIGRFAM TIGR00253 RNA_bind_YhbY: putative RNA-binding protein, YhbY family 3 97 9.9E-42 T 28-03-2018 IPR017924 RNA-binding protein YhbY GO:0003723 CI104_RS02805 276280cabe0b68e98c63414a61461c7c 97 SUPERFAMILY SSF75471 1 95 2.35E-31 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CI104_RS02805 276280cabe0b68e98c63414a61461c7c 97 Gene3D G3DSA:3.30.110.60 2 97 2.5E-28 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CI104_RS02805 276280cabe0b68e98c63414a61461c7c 97 ProDom PD010559 RNA-BINDING YHBY UPF0044 PREDICTED RNA RIBOSOMAL CONTAINING KH BINDING DOMAIN 9 97 5.0E-44 T 28-03-2018 IPR001890 RNA-binding, CRM domain GO:0003723 CI104_RS10255 567d0748eca5b7294571ec8301a867fc 151 Pfam PF07012 Curlin associated repeat 75 106 1.2E-9 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS10255 567d0748eca5b7294571ec8301a867fc 151 Pfam PF07012 Curlin associated repeat 53 86 2.0E-7 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS10255 567d0748eca5b7294571ec8301a867fc 151 Pfam PF07012 Curlin associated repeat 104 130 3.7E-6 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS27760 785f663d206cea3be56787017cb78f57 179 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 25 173 1.7E-28 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CI104_RS27760 785f663d206cea3be56787017cb78f57 179 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 9 173 4.7E-35 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CI104_RS20880 f9680e96c8e0fc8b6196bf482c4ca509 247 Gene3D G3DSA:2.70.70.10 88 241 7.3E-38 T 28-03-2018 CI104_RS20880 f9680e96c8e0fc8b6196bf482c4ca509 247 Pfam PF01551 Peptidase family M23 141 234 4.2E-31 T 28-03-2018 IPR016047 Peptidase M23 CI104_RS20880 f9680e96c8e0fc8b6196bf482c4ca509 247 SMART SM00257 39 83 2.2E-16 T 28-03-2018 IPR018392 LysM domain CI104_RS20880 f9680e96c8e0fc8b6196bf482c4ca509 247 Pfam PF01476 LysM domain 40 82 1.5E-15 T 28-03-2018 IPR018392 LysM domain CI104_RS20880 f9680e96c8e0fc8b6196bf482c4ca509 247 Gene3D G3DSA:3.10.350.10 26 87 5.3E-18 T 28-03-2018 CI104_RS20880 f9680e96c8e0fc8b6196bf482c4ca509 247 SUPERFAMILY SSF51261 39 238 2.35E-47 T 28-03-2018 IPR011055 Duplicated hybrid motif CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 ProSitePatterns PS00521 Delta 1-pyrroline-5-carboxylate reductase signature. 222 244 - T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 SUPERFAMILY SSF51735 3 159 2.79E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 Gene3D G3DSA:1.10.3730.10 160 269 7.5E-44 T 28-03-2018 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 PIRSF PIRSF000193 2 269 6.1E-98 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 Hamap MF_01925 Pyrroline-5-carboxylate reductase [proC]. 3 266 27.08 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 Pfam PF03807 NADP oxidoreductase coenzyme F420-dependent 4 99 3.2E-24 T 28-03-2018 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 TIGRFAM TIGR00112 proC: pyrroline-5-carboxylate reductase 5 266 2.2E-92 T 28-03-2018 IPR000304 Pyrroline-5-carboxylate reductase GO:0004735|GO:0006561|GO:0055114 KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 Pfam PF14748 Pyrroline-5-carboxylate reductase dimerisation 162 266 3.4E-38 T 28-03-2018 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain KEGG: 00330+1.5.1.2|MetaCyc: PWY-3341|MetaCyc: PWY-4981|MetaCyc: PWY-6344|Reactome: R-HSA-70614 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 Gene3D G3DSA:3.40.50.720 1 159 2.0E-34 T 28-03-2018 CI104_RS06080 3a490944d1551b68a0b85d50d5709deb 269 SUPERFAMILY SSF48179 162 268 2.04E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 Gene3D G3DSA:3.20.20.10 1 216 2.9E-46 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 Pfam PF00842 Alanine racemase, C-terminal domain 234 357 4.0E-39 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 31 41 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 SMART SM01005 234 358 5.3E-61 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 TIGRFAM TIGR00492 alr: alanine racemase 3 359 4.9E-148 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 SUPERFAMILY SSF50621 228 358 1.95E-43 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 Hamap MF_01201 Alanine racemase. 1 358 34.768 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 Pfam PF01168 Alanine racemase, N-terminal domain 8 219 1.4E-71 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 Gene3D G3DSA:2.40.37.10 217 359 2.2E-52 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 SUPERFAMILY SSF51419 8 235 8.0E-70 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 267 282 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 288 305 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 26 42 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 155 166 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 192 219 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 340 353 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 60 78 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 120 132 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS23335 056fb5ce7ed1e4358f703d1889fd1798 359 PRINTS PR00992 Alanine racemase signature 250 265 5.4E-77 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 Pfam PF00137 ATP synthase subunit C 11 69 1.5E-9 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 TIGRFAM TIGR01260 ATP_synt_c: ATP synthase F0, C subunit 20 77 1.9E-31 T 28-03-2018 IPR005953 ATP synthase, F0 complex, subunit C, bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 Gene3D G3DSA:1.20.20.10 1 79 9.1E-16 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 SUPERFAMILY SSF81333 3 77 4.58E-18 T 28-03-2018 IPR002379 V-ATPase proteolipid subunit C-like domain GO:0015078|GO:0015991|GO:0033177 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 Hamap MF_01396 ATP synthase subunit c [atpH]. 10 75 14.323 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 12 31 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 50 75 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 PRINTS PR00124 ATP synthase C subunit signature 33 48 1.6E-8 T 28-03-2018 IPR000454 ATP synthase, F0 complex, subunit C GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25160 56b533cc370c1e28d908debdcf79489b 79 ProSitePatterns PS00605 ATP synthase c subunit signature. 40 61 - T 28-03-2018 IPR020537 ATP synthase, F0 complex, subunit C, DCCD-binding site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25625 d9bc359b4f27cdb0acfef24dc9cc3c5c 263 Pfam PF13427 Domain of unknown function (DUF4111) 153 254 9.9E-32 T 28-03-2018 IPR025184 Domain of unknown function DUF4111 CI104_RS25625 d9bc359b4f27cdb0acfef24dc9cc3c5c 263 Pfam PF01909 Nucleotidyltransferase domain 28 101 9.3E-7 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CI104_RS25625 d9bc359b4f27cdb0acfef24dc9cc3c5c 263 Gene3D G3DSA:3.30.460.10 3 121 1.3E-11 T 28-03-2018 CI104_RS25625 d9bc359b4f27cdb0acfef24dc9cc3c5c 263 SUPERFAMILY SSF81301 9 102 6.87E-13 T 28-03-2018 CI104_RS25625 d9bc359b4f27cdb0acfef24dc9cc3c5c 263 PIRSF PIRSF000819 8 261 2.4E-54 T 28-03-2018 IPR024172 Streptomycin 3''-adenylyltransferase GO:0009012|GO:0046677 CI104_RS06565 41d28b490c8466e375210fae5b9de0c5 72 Pfam PF05321 Haemolysin expression modulating protein 13 69 1.5E-33 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS06565 41d28b490c8466e375210fae5b9de0c5 72 SUPERFAMILY SSF68989 2 72 1.2E-31 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS06565 41d28b490c8466e375210fae5b9de0c5 72 Gene3D G3DSA:1.20.1280.40 6 71 2.6E-34 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 SUPERFAMILY SSF54862 38 325 1.76E-70 T 28-03-2018 CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 Pfam PF13247 4Fe-4S dicluster domain 106 207 2.0E-22 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 Gene3D G3DSA:3.30.70.20 27 51 0.026 T 28-03-2018 CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 145 156 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 Gene3D G3DSA:3.30.70.20 169 300 2.0E-14 T 28-03-2018 CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 Gene3D G3DSA:3.30.70.20 52 126 2.0E-14 T 28-03-2018 CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 Gene3D G3DSA:3.30.70.20 127 168 3.4E-17 T 28-03-2018 CI104_RS04025 fb2c6e7178319a44fba8bcc16d1eea85 328 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 1 26 3.3E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CI104_RS24280 cd45bf686f00e93de060c49b8a9a837e 275 SUPERFAMILY SSF53639 1 272 8.83E-75 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS24280 cd45bf686f00e93de060c49b8a9a837e 275 Gene3D G3DSA:3.40.225.10 4 256 3.2E-49 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS24280 cd45bf686f00e93de060c49b8a9a837e 275 TIGRFAM TIGR02624 rhamnu_1P_ald: rhamnulose-1-phosphate aldolase 1 272 5.5E-138 T 28-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 CI104_RS24280 cd45bf686f00e93de060c49b8a9a837e 275 Hamap MF_00770 Rhamnulose-1-phosphate aldolase [rhaD]. 1 272 57.89 T 28-03-2018 IPR013447 Rhamnulose-1-phosphate aldolase GO:0008994|GO:0019301 KEGG: 00040+4.1.2.19|KEGG: 00051+4.1.2.19 CI104_RS24280 cd45bf686f00e93de060c49b8a9a837e 275 SMART SM01007 11 239 3.0E-30 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS24280 cd45bf686f00e93de060c49b8a9a837e 275 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 238 8.0E-35 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS15180 e7d63bd0cac6d77a932184ee22d4ca30 95 Pfam PF13974 YebO-like protein 17 95 1.4E-31 T 28-03-2018 IPR025594 YebO-like protein CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 Gene3D G3DSA:3.30.70.20 112 150 4.6E-20 T 28-03-2018 CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 Gene3D G3DSA:3.30.70.20 151 230 2.0E-23 T 28-03-2018 CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 Pfam PF13247 4Fe-4S dicluster domain 92 185 1.4E-29 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 Gene3D G3DSA:3.30.70.20 56 111 2.0E-17 T 28-03-2018 CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 130 141 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 Gene3D G3DSA:3.30.70.20 29 55 0.018 T 28-03-2018 CI104_RS12215 837505eed640d7aede9aca3656baf2a9 242 SUPERFAMILY SSF54862 42 220 2.62E-68 T 28-03-2018 CI104_RS17050 e3493d8ad049159ffe028f3bec3dbcca 396 SUPERFAMILY SSF103473 8 395 3.01E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS17050 e3493d8ad049159ffe028f3bec3dbcca 396 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 6 390 5.1E-156 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CI104_RS17050 e3493d8ad049159ffe028f3bec3dbcca 396 Gene3D G3DSA:1.20.1250.20 208 396 1.1E-19 T 28-03-2018 CI104_RS17050 e3493d8ad049159ffe028f3bec3dbcca 396 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 52 188 4.3E-41 T 28-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 CI104_RS17050 e3493d8ad049159ffe028f3bec3dbcca 396 Gene3D G3DSA:1.20.1250.20 4 196 4.5E-36 T 28-03-2018 CI104_RS17050 e3493d8ad049159ffe028f3bec3dbcca 396 Pfam PF07690 Major Facilitator Superfamily 16 358 3.7E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 SUPERFAMILY SSF53178 3 192 1.7E-70 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 ProSitePatterns PS01195 Peptidyl-tRNA hydrolase signature 1. 16 29 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 TIGRFAM TIGR00447 pth: aminoacyl-tRNA hydrolase 3 189 3.4E-72 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 Gene3D G3DSA:3.40.50.1470 1 194 3.8E-69 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 Pfam PF01195 Peptidyl-tRNA hydrolase 5 188 2.0E-53 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 Hamap MF_00083 Peptidyl-tRNA hydrolase [pth]. 3 182 36.227 T 28-03-2018 IPR001328 Peptidyl-tRNA hydrolase GO:0004045 MetaCyc: PWY-6308 CI104_RS14515 bb3018f73951a9b21247875694018f6d 194 ProSitePatterns PS01196 Peptidyl-tRNA hydrolase signature 2. 110 120 - T 28-03-2018 IPR018171 Peptidyl-tRNA hydrolase, conserved site GO:0004045 MetaCyc: PWY-6308 CI104_RS17000 229b57caa41051d08e9067c269355644 237 SUPERFAMILY SSF48317 5 221 8.5E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS17000 229b57caa41051d08e9067c269355644 237 SMART SM00014 94 210 2.3E-20 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS17000 229b57caa41051d08e9067c269355644 237 Gene3D G3DSA:1.20.144.10 12 222 4.0E-9 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS17000 229b57caa41051d08e9067c269355644 237 Pfam PF01569 PAP2 superfamily 135 207 2.9E-8 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS17000 229b57caa41051d08e9067c269355644 237 Hamap MF_01945 Lipid A 1-diphosphate synthase [lpxT]. 1 233 42.199 T 28-03-2018 IPR032908 Lipid A 1-diphosphate synthase GO:0005886|GO:0043165|GO:0050380 CI104_RS00415 62bff5b300ca757f04a35788b40fffb1 252 Gene3D G3DSA:1.10.10.10 7 92 1.9E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00415 62bff5b300ca757f04a35788b40fffb1 252 Pfam PF01380 SIS domain 103 205 5.3E-8 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS00415 62bff5b300ca757f04a35788b40fffb1 252 Gene3D G3DSA:3.40.50.10490 93 211 6.7E-12 T 28-03-2018 CI104_RS00415 62bff5b300ca757f04a35788b40fffb1 252 SUPERFAMILY SSF53697 101 230 2.89E-15 T 28-03-2018 CI104_RS00415 62bff5b300ca757f04a35788b40fffb1 252 SUPERFAMILY SSF46689 11 71 1.33E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS00415 62bff5b300ca757f04a35788b40fffb1 252 Pfam PF01418 Helix-turn-helix domain, rpiR family 11 65 3.5E-10 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS21925 164e681444755c34f83afd19e54bacd6 414 Gene3D G3DSA:1.10.150.130 86 200 2.9E-16 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS21925 164e681444755c34f83afd19e54bacd6 414 Pfam PF00589 Phage integrase family 211 382 7.5E-20 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS21925 164e681444755c34f83afd19e54bacd6 414 SUPERFAMILY SSF56349 97 385 1.62E-49 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS21925 164e681444755c34f83afd19e54bacd6 414 Gene3D G3DSA:1.10.443.10 201 393 3.1E-21 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS21925 164e681444755c34f83afd19e54bacd6 414 Pfam PF13356 Arm DNA-binding domain 3 86 1.6E-19 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 44 67 7.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 23 36 7.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 SUPERFAMILY SSF46689 16 90 6.98E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 Gene3D G3DSA:1.10.10.60 1 69 1.1E-19 T 28-03-2018 CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 SUPERFAMILY SSF48498 87 211 6.12E-42 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 69 4.3E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 Pfam PF08362 YcdC-like protein, C-terminal region 70 211 3.4E-58 T 28-03-2018 IPR013573 Transcription regulator YcdC, C-terminal GO:0045892 CI104_RS10165 952397c6f26e6fdea963a70670304b57 212 Gene3D G3DSA:1.10.357.10 70 212 1.4E-23 T 28-03-2018 CI104_RS22420 0b6e38c5dad94101f58f0a6aa7aec8db 104 Pfam PF00436 Single-strand binding protein family 3 87 7.4E-13 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CI104_RS22420 0b6e38c5dad94101f58f0a6aa7aec8db 104 SUPERFAMILY SSF50249 1 103 2.67E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22420 0b6e38c5dad94101f58f0a6aa7aec8db 104 PIRSF PIRSF003135 1 101 4.0E-50 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CI104_RS22420 0b6e38c5dad94101f58f0a6aa7aec8db 104 Hamap MF_00720 Primosomal replication protein N [priB]. 2 100 23.825 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CI104_RS22420 0b6e38c5dad94101f58f0a6aa7aec8db 104 Gene3D G3DSA:2.40.50.140 2 104 1.1E-12 T 28-03-2018 CI104_RS22420 0b6e38c5dad94101f58f0a6aa7aec8db 104 TIGRFAM TIGR04418 PriB_gamma: primosomal replication protein PriB 3 99 2.7E-36 T 28-03-2018 IPR023646 Primosomal replication protein PriB GO:0003697|GO:0006260|GO:0030894 CI104_RS10005 2ce2775fed78977e0dea945179481a34 247 SUPERFAMILY SSF52540 15 186 8.79E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10005 2ce2775fed78977e0dea945179481a34 247 Gene3D G3DSA:3.40.50.300 14 197 2.4E-12 T 28-03-2018 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 154 7.7E-27 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 TIGRFAM TIGR00553 pabB: aminodeoxychorismate synthase, component I 107 447 4.0E-133 T 28-03-2018 IPR005802 Para-aminobenzoate synthase, component I GO:0009396 KEGG: 00790+2.6.1.85|MetaCyc: PWY-6543 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 PRINTS PR00095 Anthranilate synthase component I signature 291 304 8.2E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 PRINTS PR00095 Anthranilate synthase component I signature 305 318 8.2E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 PRINTS PR00095 Anthranilate synthase component I signature 385 399 8.2E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 PRINTS PR00095 Anthranilate synthase component I signature 400 414 8.2E-18 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 Gene3D G3DSA:3.60.120.10 1 453 2.2E-153 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 SUPERFAMILY SSF56322 4 451 5.76E-143 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS15095 8587bea639f9908ad56455eaf7826149 453 Pfam PF00425 chorismate binding enzyme 190 443 5.3E-91 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CI104_RS23960 8e2fb5828677778af49c85885e97217a 258 SUPERFAMILY SSF53633 1 256 1.02E-61 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS23960 8e2fb5828677778af49c85885e97217a 258 PIRSF PIRSF000728 1 258 1.4E-73 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS23960 8e2fb5828677778af49c85885e97217a 258 TIGRFAM TIGR00761 argB: acetylglutamate kinase 5 234 1.2E-76 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS23960 8e2fb5828677778af49c85885e97217a 258 Hamap MF_00082_B Acetylglutamate kinase [argB]. 1 258 26.952 T 28-03-2018 IPR004662 Acetylglutamate kinase GO:0003991|GO:0005737|GO:0006526 KEGG: 00220+2.7.2.8|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS23960 8e2fb5828677778af49c85885e97217a 258 Gene3D G3DSA:3.40.1160.10 1 258 1.4E-46 T 28-03-2018 CI104_RS23960 8e2fb5828677778af49c85885e97217a 258 Pfam PF00696 Amino acid kinase family 5 235 5.8E-39 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS15610 65f2cb611d650bb5dd4faacfecea562e 83 ProDom PD060536 YECJ YPO1738 1 77 4.0E-36 T 28-03-2018 IPR020262 Uncharacterised protein family YecJ CI104_RS15610 65f2cb611d650bb5dd4faacfecea562e 83 Pfam PF10964 Protein of unknown function (DUF2766) 1 78 4.9E-47 T 28-03-2018 IPR020262 Uncharacterised protein family YecJ CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 SUPERFAMILY SSF50156 240 347 2.1E-20 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 Gene3D G3DSA:2.30.42.10 259 355 2.6E-21 T 28-03-2018 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 SUPERFAMILY SSF50494 44 254 2.92E-61 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 Pfam PF13180 PDZ domain 279 347 9.5E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 Gene3D G3DSA:2.40.10.10 42 151 7.7E-32 T 28-03-2018 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 SMART SM00228 257 339 6.3E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 Pfam PF13365 Trypsin-like peptidase domain 80 215 6.1E-29 T 28-03-2018 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 PRINTS PR00834 HtrA/DegQ protease family signature 297 309 1.5E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 PRINTS PR00834 HtrA/DegQ protease family signature 151 175 1.5E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 PRINTS PR00834 HtrA/DegQ protease family signature 208 225 1.5E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 PRINTS PR00834 HtrA/DegQ protease family signature 110 130 1.5E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 PRINTS PR00834 HtrA/DegQ protease family signature 186 203 1.5E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 PRINTS PR00834 HtrA/DegQ protease family signature 89 101 1.5E-47 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 Gene3D G3DSA:2.40.10.10 152 258 2.1E-31 T 28-03-2018 CI104_RS02545 410eac55ee753bbb21a58d4c66456e26 355 TIGRFAM TIGR02038 protease_degS: periplasmic serine peptidase DegS 2 352 3.5E-177 T 28-03-2018 IPR011783 Peptidase S1C, DegS GO:0004252|GO:0006508 CI104_RS17260 f476a02f22731ce09b3bfbc9423cbc27 216 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS17260 f476a02f22731ce09b3bfbc9423cbc27 216 Pfam PF01144 Coenzyme A transferase 5 185 6.1E-38 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS17260 f476a02f22731ce09b3bfbc9423cbc27 216 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 204 4.6E-93 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CI104_RS17260 f476a02f22731ce09b3bfbc9423cbc27 216 SUPERFAMILY SSF100950 2 209 1.22E-67 T 28-03-2018 CI104_RS17260 f476a02f22731ce09b3bfbc9423cbc27 216 SMART SM00882 5 198 3.0E-65 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS17260 f476a02f22731ce09b3bfbc9423cbc27 216 Gene3D G3DSA:3.40.1080.10 2 210 4.2E-65 T 28-03-2018 CI104_RS12675 33c6f1c9dd94a0830f93bfcd37c9b722 406 Gene3D G3DSA:3.30.420.40 206 395 2.5E-41 T 28-03-2018 CI104_RS12675 33c6f1c9dd94a0830f93bfcd37c9b722 406 Pfam PF00480 ROK family 90 389 2.4E-53 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS12675 33c6f1c9dd94a0830f93bfcd37c9b722 406 Gene3D G3DSA:3.30.420.40 78 205 2.3E-16 T 28-03-2018 CI104_RS12675 33c6f1c9dd94a0830f93bfcd37c9b722 406 SUPERFAMILY SSF46785 12 77 1.44E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12675 33c6f1c9dd94a0830f93bfcd37c9b722 406 Gene3D G3DSA:1.10.10.10 11 77 4.0E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12675 33c6f1c9dd94a0830f93bfcd37c9b722 406 SUPERFAMILY SSF53067 87 391 9.58E-45 T 28-03-2018 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 497 510 1.5E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 338 359 1.5E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 465 483 1.5E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 261 279 1.5E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 150 169 1.5E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 PRINTS PR00662 Glucose-6-phosphate isomerase signature 483 497 1.5E-55 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 Pfam PF00342 Phosphoglucose isomerase 52 541 7.5E-257 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 Gene3D G3DSA:3.40.50.10490 145 258 6.4E-54 T 28-03-2018 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 Gene3D G3DSA:1.10.1390.10 513 548 2.3E-21 T 28-03-2018 IPR023096 Phosphoglucose isomerase, C-terminal GO:0004347|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 Hamap MF_00473 Glucose-6-phosphate isomerase [pgi]. 46 524 42.997 T 28-03-2018 IPR001672 Phosphoglucose isomerase (PGI) GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 ProSitePatterns PS00765 Phosphoglucose isomerase signature 1. 265 278 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 SUPERFAMILY SSF53697 5 547 2.67E-227 T 28-03-2018 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 Gene3D G3DSA:3.40.50.10490 1 144 2.0E-49 T 28-03-2018 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 ProSitePatterns PS00174 Phosphoglucose isomerase signature 2. 497 514 - T 28-03-2018 IPR018189 Phosphoglucose isomerase, conserved site GO:0004347|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385|Reactome: R-HSA-5628897|Reactome: R-HSA-6798695|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS23465 a544eb96ea032889676846ae345acfa2 548 Gene3D G3DSA:3.40.50.10490 259 512 2.6E-124 T 28-03-2018 CI104_RS20640 1ed46ba72c5f728f6c8d0f3c58e4ae43 878 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 325 335 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CI104_RS20640 1ed46ba72c5f728f6c8d0f3c58e4ae43 878 Pfam PF00577 Outer membrane usher protein 208 790 3.4E-221 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS20640 1ed46ba72c5f728f6c8d0f3c58e4ae43 878 Pfam PF13953 PapC C-terminal domain 799 862 8.9E-23 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS20640 1ed46ba72c5f728f6c8d0f3c58e4ae43 878 Pfam PF13954 PapC N-terminal domain 48 193 6.7E-49 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS20640 1ed46ba72c5f728f6c8d0f3c58e4ae43 878 SUPERFAMILY SSF141729 46 170 5.62E-35 T 28-03-2018 CI104_RS03505 b3a8e6e89bbedf0c9e1b4577bb0d27df 277 Pfam PF05929 Phage capsid scaffolding protein (GPO) serine peptidase 6 277 4.0E-115 T 28-03-2018 IPR009228 Capsid scaffolding protein GpO GO:0019069 CI104_RS03505 b3a8e6e89bbedf0c9e1b4577bb0d27df 277 Gene3D G3DSA:3.90.20.10 105 264 0.001 T 28-03-2018 CI104_RS09230 1127e2eb20a4b0401ee615edbc75b9f9 55 ProDom PD051650 RIBOSOME MODULATION FACTOR E FACTOR-RELATED DIMERIZATION BIOGENESIS RIBOSOMES INVOLVED 70S 1 55 4.0E-25 T 28-03-2018 IPR007040 Ribosome modulation factor CI104_RS09230 1127e2eb20a4b0401ee615edbc75b9f9 55 Gene3D G3DSA:1.10.10.620 3 53 3.2E-26 T 28-03-2018 CI104_RS09230 1127e2eb20a4b0401ee615edbc75b9f9 55 Pfam PF04957 Ribosome modulation factor 1 52 2.6E-30 T 28-03-2018 IPR007040 Ribosome modulation factor CI104_RS09230 1127e2eb20a4b0401ee615edbc75b9f9 55 Hamap MF_00919 Ribosome modulation factor [rmf]. 1 55 31.824 T 28-03-2018 IPR007040 Ribosome modulation factor CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 6 173 2.5E-50 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 Pfam PF03450 CO dehydrogenase flavoprotein C-terminal domain 183 283 7.9E-24 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 Gene3D G3DSA:3.30.43.10 4 56 4.4E-15 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 SUPERFAMILY SSF56176 6 173 7.09E-50 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 Gene3D G3DSA:3.30.465.10 57 174 4.3E-31 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 Gene3D G3DSA:3.30.390.50 177 292 3.6E-26 T 28-03-2018 CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 SMART SM01092 181 283 6.0E-26 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CI104_RS20890 2bd2359b2c68b996bbfcc9ad8f8cc6c2 292 SUPERFAMILY SSF55447 181 283 1.07E-24 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CI104_RS21150 286a04e2f00322b47e9b7811571e8c07 322 TIGRFAM TIGR00338 serB: phosphoserine phosphatase SerB 97 315 1.2E-93 T 28-03-2018 CI104_RS21150 286a04e2f00322b47e9b7811571e8c07 322 SUPERFAMILY SSF56784 111 315 4.47E-46 T 28-03-2018 IPR023214 HAD-like domain CI104_RS21150 286a04e2f00322b47e9b7811571e8c07 322 Pfam PF12710 haloacid dehalogenase-like hydrolase 116 280 2.5E-17 T 28-03-2018 CI104_RS21150 286a04e2f00322b47e9b7811571e8c07 322 TIGRFAM TIGR01488 HAD-SF-IB: HAD phosphoserine phosphatase-like hydrolase, family IB 112 282 1.2E-25 T 28-03-2018 CI104_RS21150 286a04e2f00322b47e9b7811571e8c07 322 Gene3D G3DSA:3.40.50.1000 170 315 1.6E-25 T 28-03-2018 IPR023214 HAD-like domain CI104_RS21150 286a04e2f00322b47e9b7811571e8c07 322 Gene3D G3DSA:1.10.150.210 123 169 2.6E-23 T 28-03-2018 IPR023190 Phosphoserine phosphatase, domain 2 GO:0004647|GO:0006564 KEGG: 00260+3.1.3.3|KEGG: 00680+3.1.3.3|Reactome: R-HSA-977347 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 Gene3D G3DSA:2.60.120.280 20 174 8.8E-15 T 28-03-2018 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 Gene3D G3DSA:1.10.10.60 240 289 5.9E-11 T 28-03-2018 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 SUPERFAMILY SSF46689 240 286 2.46E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 269 285 8.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 269 8.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 SUPERFAMILY SSF51215 36 170 2.35E-8 T 28-03-2018 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 Gene3D G3DSA:1.10.10.60 176 238 2.9E-5 T 28-03-2018 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 Pfam PF12833 Helix-turn-helix domain 208 286 3.0E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS21290 b6c4009b99d1350e02795357518e5abd 291 SMART SM00342 202 285 5.6E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS25560 b1253f208739e5c3f56b3cc18c486c49 70 Pfam PF05321 Haemolysin expression modulating protein 10 65 5.4E-24 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS25560 b1253f208739e5c3f56b3cc18c486c49 70 SUPERFAMILY SSF68989 3 69 1.31E-26 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS25560 b1253f208739e5c3f56b3cc18c486c49 70 Gene3D G3DSA:1.20.1280.40 3 68 2.1E-28 T 28-03-2018 IPR007985 Haemolysin expression modulating, HHA CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Gene3D G3DSA:3.20.20.60 480 792 1.1E-102 T 28-03-2018 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Pfam PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain 22 350 1.7E-120 T 28-03-2018 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding GO:0005524|GO:0016301|GO:0016310 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Gene3D G3DSA:3.50.30.10 360 478 1.5E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 416 427 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Gene3D G3DSA:3.30.1490.20 6 197 1.4E-54 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Gene3D G3DSA:3.30.470.20 198 359 6.4E-45 T 28-03-2018 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 PIRSF PIRSF000854 4 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 TIGRFAM TIGR01418 PEP_synth: phosphoenolpyruvate synthase 9 792 0.0 T 28-03-2018 IPR006319 Phosphoenolpyruvate synthase GO:0006090|GO:0008986 KEGG: 00620+2.7.9.2|KEGG: 00680+2.7.9.2|KEGG: 00720+2.7.9.2|MetaCyc: PWY-5484 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 SUPERFAMILY SSF56059 7 386 5.53E-109 T 28-03-2018 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 SUPERFAMILY SSF51621 467 790 6.28E-95 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 483 789 1.5E-58 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 Pfam PF00391 PEP-utilising enzyme, mobile domain 386 457 1.0E-26 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 SUPERFAMILY SSF52009 350 468 3.27E-35 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS12015 33ae066f0fce03eeb10abf72d3fd0371 792 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 696 714 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 Pfam PF00210 Ferritin-like domain 8 143 7.9E-39 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 65 85 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 3 22 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 128 149 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 44 64 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 23 43 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 86 106 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PRINTS PR00601 Bacterioferritin signature 107 127 1.6E-77 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 PIRSF PIRSF002560 1 157 2.2E-71 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 ProSitePatterns PS00549 Bacterioferritin signature. 1 19 - T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 SUPERFAMILY SSF47240 1 154 1.06E-53 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 TIGRFAM TIGR00754 bfr: bacterioferritin 1 155 1.1E-81 T 28-03-2018 IPR002024 Bacterioferritin GO:0006826|GO:0006879|GO:0008199 CI104_RS02030 cddc17cf573f66f8bf5615efb5abbac5 158 Gene3D G3DSA:1.20.1260.10 2 150 2.2E-39 T 28-03-2018 IPR012347 Ferritin-related CI104_RS16525 995299e632cf58242822025aad7aa156 248 TIGRFAM TIGR04009 wcaE: colanic acid biosynthesis glycosyltransferase WcaE 1 248 1.3E-147 T 28-03-2018 IPR024010 Colanic acid biosynthesis, glycosyl transferase, WcaE CI104_RS16525 995299e632cf58242822025aad7aa156 248 SUPERFAMILY SSF53448 2 205 7.8E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16525 995299e632cf58242822025aad7aa156 248 Gene3D G3DSA:3.90.550.10 1 207 1.5E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16525 995299e632cf58242822025aad7aa156 248 Pfam PF00535 Glycosyl transferase family 2 4 113 1.6E-14 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS06905 fd4ebea862aee2613922e2220639b458 714 Gene3D G3DSA:1.25.40.10 546 713 0.35 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS06905 fd4ebea862aee2613922e2220639b458 714 Gene3D G3DSA:1.25.40.10 132 330 0.0026 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS06905 fd4ebea862aee2613922e2220639b458 714 Gene3D G3DSA:1.25.40.10 359 495 0.055 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS19150 bc1755f0f804b490294425fff8ee02cd 346 Gene3D G3DSA:1.20.1440.30 77 197 0.001 T 28-03-2018 CI104_RS19150 bc1755f0f804b490294425fff8ee02cd 346 SUPERFAMILY SSF159501 1 337 1.02E-35 T 28-03-2018 CI104_RS19150 bc1755f0f804b490294425fff8ee02cd 346 Gene3D G3DSA:3.40.1660.10 198 339 2.1E-8 T 28-03-2018 CI104_RS19150 bc1755f0f804b490294425fff8ee02cd 346 Pfam PF05139 Erythromycin esterase 2 336 1.1E-24 T 28-03-2018 IPR007815 Erythromycin esterase GO:0046677 CI104_RS16400 f21cfa4fc7db1c74dddc8cbd64fc0e97 638 Pfam PF02719 Polysaccharide biosynthesis protein 280 573 2.7E-124 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CI104_RS16400 f21cfa4fc7db1c74dddc8cbd64fc0e97 638 Gene3D G3DSA:3.40.50.720 273 610 5.9E-58 T 28-03-2018 CI104_RS16400 f21cfa4fc7db1c74dddc8cbd64fc0e97 638 Pfam PF13727 CoA-binding domain 67 235 8.2E-12 T 28-03-2018 CI104_RS16400 f21cfa4fc7db1c74dddc8cbd64fc0e97 638 SUPERFAMILY SSF51735 278 582 5.84E-48 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16400 f21cfa4fc7db1c74dddc8cbd64fc0e97 638 SUPERFAMILY SSF53335 125 337 1.83E-19 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS16400 f21cfa4fc7db1c74dddc8cbd64fc0e97 638 Gene3D G3DSA:3.40.50.720 137 261 8.0E-23 T 28-03-2018 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 SUPERFAMILY SSF64153 17 256 1.2E-62 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 Gene3D G3DSA:3.40.50.10260 2 229 6.7E-65 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 TIGRFAM TIGR00197 yjeF_nterm: YjeF family N-terminal domain 20 220 7.9E-63 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 ProSitePatterns PS01050 YjeF C-terminal domain signature 2. 438 448 - T 28-03-2018 IPR017953 Carbohydrate kinase, predicted, conserved site CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 PIRSF PIRSF017184 15 504 3.0E-165 T 28-03-2018 IPR030677 Bifunctional NAD(P)H-hydrate repair enzyme Nnr GO:0052855 MetaCyc: PWY-6938 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 SUPERFAMILY SSF53613 232 498 3.78E-74 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 Pfam PF01256 Carbohydrate kinase 257 496 8.1E-78 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 Pfam PF03853 YjeF-related protein N-terminus 40 199 1.8E-41 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 TIGRFAM TIGR00196 yjeF_cterm: YjeF family C-terminal domain 233 499 2.8E-92 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 Hamap MF_01966 NAD(P)H-hydrate epimerase [nnrE]. 19 220 23.636 T 28-03-2018 IPR004443 YjeF N-terminal domain MetaCyc: PWY-6938 CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 Gene3D G3DSA:3.40.1190.20 230 500 1.7E-50 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS22560 f8e0904a4a5405043106251879e1a1a9 515 Hamap MF_01965 ADP-dependent (S)-NAD(P)H-hydrate dehydratase [nnrD]. 234 499 23.355 T 28-03-2018 IPR000631 ATP-dependent (S)-NAD(P)H-hydrate dehydratase GO:0052855 Reactome: R-HSA-197264 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 SMART SM00729 14 222 1.3E-5 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 Pfam PF06463 Molybdenum Cofactor Synthesis C 186 312 1.3E-39 T 28-03-2018 IPR010505 Molybdenum cofactor synthesis C-terminal GO:0006777|GO:0019008|GO:0051539 Reactome: R-HSA-947581 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 TIGRFAM TIGR02666 moaA: molybdenum cofactor biosynthesis protein A 5 329 7.4E-109 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 Pfam PF13353 4Fe-4S single cluster domain 23 125 7.0E-7 T 28-03-2018 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 SUPERFAMILY SSF102114 5 290 3.14E-71 T 28-03-2018 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 Pfam PF04055 Radical SAM superfamily 19 181 3.2E-28 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 Gene3D G3DSA:3.20.20.70 1 329 3.8E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 ProSitePatterns PS01305 moaA / nifB / pqqE family signature. 20 31 - T 28-03-2018 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site GO:0003824|GO:0046872|GO:0051539 Reactome: R-HSA-947581 CI104_RS08305 af684ca948b437dbcebfb5f8c071af35 329 Hamap MF_01225_B GTP 3',8-cyclase [moaA]. 5 329 37.902 T 28-03-2018 IPR013483 Molybdenum cofactor biosynthesis protein A GO:0006777|GO:0046872 Reactome: R-HSA-947581 CI104_RS03730 56d398343b80f73da01362dafa0f1de4 303 Pfam PF05681 Fumarate hydratase (Fumerase) 16 284 5.3E-79 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS03730 56d398343b80f73da01362dafa0f1de4 303 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 14 287 3.5E-122 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 Gene3D G3DSA:3.30.420.40 217 429 1.2E-28 T 28-03-2018 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 SUPERFAMILY SSF53067 85 205 5.0E-27 T 28-03-2018 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 SUPERFAMILY SSF53067 2 44 5.0E-27 T 28-03-2018 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 SUPERFAMILY SSF53067 208 276 2.89E-31 T 28-03-2018 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 SUPERFAMILY SSF53067 328 447 2.89E-31 T 28-03-2018 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 213 226 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 Pfam PF00012 Hsp70 protein 3 228 5.5E-16 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 Pfam PF00012 Hsp70 protein 333 420 1.0E-4 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS16600 1337438ae7b8bdaf81ae0957bbd8c4c9 450 Gene3D G3DSA:3.30.420.40 1 216 1.0E-34 T 28-03-2018 CI104_RS09765 f92fb851c7ee2c35faef5e32fd1d53cd 584 PIRSF PIRSF028304 1 583 2.9E-162 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS09765 f92fb851c7ee2c35faef5e32fd1d53cd 584 TIGRFAM TIGR03359 VI_chp_6: type VI secretion protein, TIGR03359 family 6 579 1.3E-171 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS09765 f92fb851c7ee2c35faef5e32fd1d53cd 584 Pfam PF05947 Type VI secretion system, TssF 6 581 5.0E-188 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 Gene3D G3DSA:3.40.1190.20 2 262 2.0E-51 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 Pfam PF02110 Hydroxyethylthiazole kinase family 15 259 6.9E-97 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 167 184 1.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 123 137 1.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 67 75 1.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 93 110 1.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 23 30 1.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PRINTS PR01099 Hydroxyethylthiazole kinase family signature 36 57 1.4E-42 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 SUPERFAMILY SSF53613 14 259 8.51E-59 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 Hamap MF_00228 Hydroxyethylthiazole kinase [thiM]. 17 262 29.847 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 PIRSF PIRSF000513 9 262 3.1E-95 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16680 a00ec9ae4356a9b88008877062917d4c 262 TIGRFAM TIGR00694 thiM: hydroxyethylthiazole kinase 15 260 4.8E-90 T 28-03-2018 IPR000417 Hydroxyethylthiazole kinase GO:0004417|GO:0009228 KEGG: 00730+2.7.1.50|MetaCyc: PWY-6897|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 190 204 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 Gene3D G3DSA:3.40.50.300 115 268 3.3E-25 T 28-03-2018 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 Gene3D G3DSA:3.40.50.300 269 326 7.5E-7 T 28-03-2018 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 Pfam PF00437 Type II/IV secretion system protein 112 260 9.2E-41 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 TIGRFAM TIGR01420 pilT_fam: twitching motility protein 2 325 1.7E-134 T 28-03-2018 IPR006321 Pilus retraction protein PilT GO:0005524|GO:0006810 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 Gene3D G3DSA:3.30.450.90 1 97 1.6E-15 T 28-03-2018 CI104_RS04200 597a45bdf1f5211f4cb7b2cbcef66e8a 326 SUPERFAMILY SSF52540 4 324 2.48E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26450 8157b9f054755cfb20fba8b6ef98102f 275 SUPERFAMILY SSF52540 10 270 1.92E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26450 8157b9f054755cfb20fba8b6ef98102f 275 Pfam PF13614 AAA domain 11 188 3.1E-42 T 28-03-2018 IPR025669 AAA domain CI104_RS26450 8157b9f054755cfb20fba8b6ef98102f 275 Gene3D G3DSA:3.40.50.300 9 270 5.7E-42 T 28-03-2018 CI104_RS28405 0f6d7c543ce80096fed23cabf264525f 250 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 15 249 1.8E-92 T 28-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF CI104_RS28405 0f6d7c543ce80096fed23cabf264525f 250 Pfam PF13728 F plasmid transfer operon protein 26 239 8.3E-67 T 28-03-2018 CI104_RS28405 0f6d7c543ce80096fed23cabf264525f 250 Gene3D G3DSA:3.40.30.10 17 244 3.0E-4 T 28-03-2018 CI104_RS24420 454709de8b7d45f45171addafd7151de 309 PIRSF PIRSF018296 1 309 2.7E-138 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CI104_RS24420 454709de8b7d45f45171addafd7151de 309 TIGRFAM TIGR01562 FdhE: formate dehydrogenase accessory protein FdhE 2 305 1.6E-153 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CI104_RS24420 454709de8b7d45f45171addafd7151de 309 Pfam PF04216 Protein involved in formate dehydrogenase formation 22 304 1.4E-117 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CI104_RS24420 454709de8b7d45f45171addafd7151de 309 Hamap MF_00611 Protein FdhE [fdhE]. 3 306 50.434 T 28-03-2018 IPR006452 Formate dehydrogenase accessory protein GO:0005737 CI104_RS24420 454709de8b7d45f45171addafd7151de 309 Gene3D G3DSA:3.90.1670.10 24 308 8.5E-103 T 28-03-2018 IPR024064 FdhE-like CI104_RS24420 454709de8b7d45f45171addafd7151de 309 SUPERFAMILY SSF144020 24 306 2.88E-99 T 28-03-2018 IPR024064 FdhE-like CI104_RS16120 579724ce4fec8d1d2c36a4eb54108648 264 SUPERFAMILY SSF53800 2 256 1.09E-80 T 28-03-2018 CI104_RS16120 579724ce4fec8d1d2c36a4eb54108648 264 Gene3D G3DSA:3.40.50.1400 124 236 8.2E-22 T 28-03-2018 CI104_RS16120 579724ce4fec8d1d2c36a4eb54108648 264 Pfam PF06180 Cobalt chelatase (CbiK) 3 256 7.8E-103 T 28-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CI104_RS16120 579724ce4fec8d1d2c36a4eb54108648 264 Gene3D G3DSA:3.40.50.1400 1 123 3.0E-12 T 28-03-2018 CI104_RS16120 579724ce4fec8d1d2c36a4eb54108648 264 PIRSF PIRSF033579 1 264 1.1E-106 T 28-03-2018 IPR010388 Anaerobic cobalt chelatase GO:0016852|GO:0019251 KEGG: 00860+4.99.1.3|MetaCyc: PWY-7377 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 SUPERFAMILY SSF51905 468 627 1.67E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 497 515 1.3E-11 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 377 396 1.3E-11 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 618 634 1.3E-11 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 Gene3D G3DSA:3.20.20.70 2 369 4.3E-111 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 SUPERFAMILY SSF51971 333 518 2.94E-39 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 Gene3D G3DSA:3.50.50.60 479 625 2.3E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 Gene3D G3DSA:3.40.50.720 370 478 5.0E-19 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 376 649 3.1E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 619 633 4.7E-6 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 376 398 4.7E-6 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 SUPERFAMILY SSF51395 1 362 3.38E-109 T 28-03-2018 CI104_RS03310 f8f074e44db72f18b18b1b9c532ff4a0 672 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 331 3.2E-101 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CI104_RS21815 bd25d55479bb342e46fa0800309ef3fe 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.739 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21815 bd25d55479bb342e46fa0800309ef3fe 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21815 bd25d55479bb342e46fa0800309ef3fe 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 8.5E-94 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21815 bd25d55479bb342e46fa0800309ef3fe 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 8.5E-102 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21815 bd25d55479bb342e46fa0800309ef3fe 269 SUPERFAMILY SSF51366 1 266 1.04E-88 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS21815 bd25d55479bb342e46fa0800309ef3fe 269 Gene3D G3DSA:3.20.20.70 1 268 2.1E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 Gene3D G3DSA:3.40.1190.20 3 306 3.6E-69 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 PRINTS PR00990 Ribokinase signature 216 227 5.9E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 PRINTS PR00990 Ribokinase signature 23 42 5.9E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 PRINTS PR00990 Ribokinase signature 176 191 5.9E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 Pfam PF00294 pfkB family carbohydrate kinase 3 299 5.5E-69 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 SUPERFAMILY SSF53613 2 305 7.95E-79 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 245 258 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS22245 549d20c740ce9e4b6ebe235d9b9f883e 307 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 28 52 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS19115 95641efd71b35d09f4a29812cc712e25 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 2.9E-152 T 28-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CI104_RS19115 95641efd71b35d09f4a29812cc712e25 337 Gene3D G3DSA:1.10.443.10 112 318 2.9E-46 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS19115 95641efd71b35d09f4a29812cc712e25 337 SUPERFAMILY SSF56349 16 316 2.5E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS19115 95641efd71b35d09f4a29812cc712e25 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS19115 95641efd71b35d09f4a29812cc712e25 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 4.1E-23 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS19115 95641efd71b35d09f4a29812cc712e25 337 Gene3D G3DSA:1.10.150.130 13 97 2.1E-10 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS19515 110a544cb70984249cda9a4aba1037ea 149 Gene3D G3DSA:3.10.350.10 93 149 3.3E-16 T 28-03-2018 CI104_RS19515 110a544cb70984249cda9a4aba1037ea 149 Pfam PF04972 BON domain 23 88 3.3E-10 T 28-03-2018 IPR007055 BON domain CI104_RS19515 110a544cb70984249cda9a4aba1037ea 149 SMART SM00257 98 147 3.4E-14 T 28-03-2018 IPR018392 LysM domain CI104_RS19515 110a544cb70984249cda9a4aba1037ea 149 SMART SM00749 28 91 1.1E-8 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CI104_RS19515 110a544cb70984249cda9a4aba1037ea 149 Pfam PF01476 LysM domain 99 147 2.0E-14 T 28-03-2018 IPR018392 LysM domain CI104_RS19515 110a544cb70984249cda9a4aba1037ea 149 SUPERFAMILY SSF54106 97 147 4.19E-8 T 28-03-2018 IPR018392 LysM domain CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 Pfam PF01926 50S ribosome-binding GTPase 161 284 1.9E-23 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 TIGRFAM TIGR02729 Obg_CgtA: Obg family GTPase CgtA 3 331 3.0E-148 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 ProSitePatterns PS00905 GTP1/OBG family signature. 213 226 - T 28-03-2018 IPR006074 GTP1/OBG, conserved site GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 Hamap MF_01454 GTPase Obg [obg]. 2 333 48.265 T 28-03-2018 IPR014100 GTP-binding protein Obg/CgtA GO:0000287|GO:0003924|GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 PIRSF PIRSF002401 1 376 3.2E-140 T 28-03-2018 IPR035101 GTP-binding protein, Obg-type CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 Gene3D G3DSA:2.70.210.12 2 156 7.4E-58 T 28-03-2018 IPR006169 GTP1/OBG domain CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 SUPERFAMILY SSF52540 151 338 4.81E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 SUPERFAMILY SSF82051 2 157 1.24E-56 T 28-03-2018 IPR006169 GTP1/OBG domain CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 Gene3D G3DSA:3.40.50.300 159 379 1.4E-32 T 28-03-2018 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 Pfam PF01018 GTP1/OBG 4 157 1.0E-58 T 28-03-2018 IPR006169 GTP1/OBG domain CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 183 201 3.5E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 228 246 3.5E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 162 182 3.5E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS02790 fed9088bc26829a0aafd631716f089db 390 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 211 226 3.5E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS16475 1ba1f7663ad9fe5be658ef0bb0f829f6 426 Pfam PF04230 Polysaccharide pyruvyl transferase 13 356 5.7E-40 T 28-03-2018 IPR007345 Polysaccharide pyruvyl transferase CI104_RS16475 1ba1f7663ad9fe5be658ef0bb0f829f6 426 TIGRFAM TIGR04006 wcaK: colanic acid biosynthesis pyruvyl transferase WcaK 1 426 6.2E-279 T 28-03-2018 IPR023918 Colanic acid biosynthesis, pyruvyl transferase, WcaK CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 PIRSF PIRSF000148 4 337 1.6E-99 T 28-03-2018 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 Gene3D G3DSA:3.40.50.720 1 143 8.8E-30 T 28-03-2018 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 SUPERFAMILY SSF55347 131 319 2.37E-51 T 28-03-2018 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 Pfam PF02774 Semialdehyde dehydrogenase, dimerisation domain 141 317 6.8E-40 T 28-03-2018 IPR012280 Semialdehyde dehydrogenase, dimerisation domain GO:0003942|GO:0005737|GO:0008652|GO:0016620|GO:0046983|GO:0055114 KEGG: 00220+1.2.1.38|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 Gene3D G3DSA:3.30.360.10 144 314 1.9E-45 T 28-03-2018 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 SMART SM00859 6 121 7.4E-32 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 Pfam PF01118 Semialdehyde dehydrogenase, NAD binding domain 6 118 4.0E-24 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS17740 91a89b8eccd2c8e731a3fac52c7c631f 337 SUPERFAMILY SSF51735 5 157 8.78E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 177 190 1.1E-7 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 54 63 1.1E-7 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00096 Glutamine amidotransferase superfamily signature 81 92 1.1E-7 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00097 Anthranilate synthase component II signature 81 92 2.6E-6 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00097 Anthranilate synthase component II signature 54 63 2.6E-6 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00097 Anthranilate synthase component II signature 177 190 2.6E-6 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Gene3D G3DSA:3.30.300.10 401 525 4.8E-53 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 SUPERFAMILY SSF54810 405 525 1.7E-51 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 TIGRFAM TIGR00888 guaA_Nterm: GMP synthase (glutamine-hydrolyzing), N-terminal domain 10 205 3.2E-84 T 28-03-2018 IPR004739 GMP synthase, glutamine amidotransferase GO:0003922|GO:0005524|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 SUPERFAMILY SSF52402 197 420 3.53E-59 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Gene3D G3DSA:3.40.50.620 223 400 3.1E-36 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 SUPERFAMILY SSF52317 5 204 3.64E-59 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Hamap MF_00344 GMP synthase [glutamine-hydrolyzing] [guaA]. 7 525 56.589 T 28-03-2018 IPR022955 GMP synthase GO:0003922|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Pfam PF00117 Glutamine amidotransferase class-I 12 199 2.7E-41 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Pfam PF02540 NAD synthase 217 260 4.6E-7 T 28-03-2018 IPR022310 NAD/GMP synthase CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 51 65 9.4E-7 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 10 24 9.4E-7 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 81 97 9.4E-7 T 28-03-2018 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 TIGRFAM TIGR00884 guaA_Cterm: GMP synthase (glutamine-hydrolyzing), C-terminal domain 212 525 3.5E-157 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Gene3D G3DSA:3.40.50.880 5 222 3.7E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS18500 6587ef9bb8600ed3e45534885cfe676c 525 Pfam PF00958 GMP synthase C terminal domain 433 524 7.4E-44 T 28-03-2018 IPR001674 GMP synthase, C-terminal GO:0003922|GO:0005524|GO:0006164|GO:0006177 KEGG: 00230+6.3.5.2|KEGG: 00983+6.3.5.2|MetaCyc: PWY-7221|Reactome: R-HSA-73817 CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 Gene3D G3DSA:2.160.20.20 14 507 1.0E-40 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 SUPERFAMILY SSF103515 542 856 1.7E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 326 352 9.5E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 Gene3D G3DSA:2.40.128.130 534 856 3.5E-56 T 28-03-2018 CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 140 185 1.6E-9 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 405 856 3.5E-124 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 SMART SM00869 576 845 4.4E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 Pfam PF12951 Passenger-associated-transport-repeat 326 350 1.1E-6 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 SUPERFAMILY SSF51126 39 509 1.22E-33 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 Pfam PF03797 Autotransporter beta-domain 579 834 2.3E-53 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05875 c6e69dbe686faac2049ee70bdd7dd372 856 Pfam PF03212 Pertactin 388 502 1.2E-9 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Pfam PF01632 Ribosomal protein L35 2 60 2.6E-22 T 28-03-2018 IPR021137 Ribosomal protein L35 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 Hamap MF_00514 50S ribosomal protein L35 [rpmI]. 1 64 17.841 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 SUPERFAMILY SSF143034 2 64 3.01E-22 T 28-03-2018 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 TIGRFAM TIGR00001 rpmI_bact: ribosomal protein bL35 2 64 1.2E-26 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 36 54 1.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 3 20 1.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 PRINTS PR00064 Ribosomal protein L35 signature 21 35 1.1E-22 T 28-03-2018 IPR001706 Ribosomal protein L35, non-mitochondrial GO:0003735|GO:0005840|GO:0006412 CI104_RS11945 fe1a8a3a51c56dbf0860aac70e1d7bd7 65 ProSitePatterns PS00936 Ribosomal protein L35 signature. 5 31 - T 28-03-2018 IPR018265 Ribosomal protein L35, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS25715 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25715 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25715 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25715 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 277 6.6E-72 T 28-03-2018 CI104_RS25715 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25715 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS25685 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25685 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25685 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25685 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 277 6.6E-72 T 28-03-2018 CI104_RS25685 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25685 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS25635 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25635 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25635 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25635 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 277 6.6E-72 T 28-03-2018 CI104_RS25635 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS25635 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS19160 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS19160 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS19160 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS19160 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 277 6.6E-72 T 28-03-2018 CI104_RS19160 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS19160 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS26840 4b4005e1f5f45f11661f2f79949fb437 279 Pfam PF00809 Pterin binding enzyme 5 248 2.6E-69 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS26840 4b4005e1f5f45f11661f2f79949fb437 279 SUPERFAMILY SSF51717 3 265 1.7E-66 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS26840 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 38 51 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS26840 4b4005e1f5f45f11661f2f79949fb437 279 Gene3D G3DSA:3.20.20.20 1 277 6.6E-72 T 28-03-2018 CI104_RS26840 4b4005e1f5f45f11661f2f79949fb437 279 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 4 19 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS26840 4b4005e1f5f45f11661f2f79949fb437 279 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 4 262 4.8E-82 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 ProSitePatterns PS00455 Putative AMP-binding domain signature. 178 189 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Gene3D G3DSA:2.30.38.10 335 419 2.1E-23 T 28-03-2018 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Hamap MF_01524 Probable crotonobetaine/carnitine-CoA ligase [caiC]. 1 517 81.336 T 28-03-2018 IPR023456 Crotonobetaine/carnitine-CoA ligase CaiC GO:0009437|GO:0016878|GO:0051108|GO:0051109 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Gene3D G3DSA:3.30.300.30 421 517 9.8E-21 T 28-03-2018 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 SUPERFAMILY SSF56801 9 517 4.58E-134 T 28-03-2018 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Gene3D G3DSA:3.40.50.980 184 334 6.1E-35 T 28-03-2018 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Gene3D G3DSA:3.40.50.980 6 183 4.7E-38 T 28-03-2018 CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Pfam PF13193 AMP-binding enzyme C-terminal domain 435 510 2.4E-14 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS04640 07f450b3ac98688ccffcc554a3cdd331 517 Pfam PF00501 AMP-binding enzyme 20 426 8.0E-91 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS06765 c2e89781655a445df3c1549eb56f9e20 112 Gene3D G3DSA:3.30.1380.10 8 106 6.1E-9 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS06765 c2e89781655a445df3c1549eb56f9e20 112 Pfam PF13539 D-alanyl-D-alanine carboxypeptidase 47 106 2.2E-10 T 28-03-2018 CI104_RS06765 c2e89781655a445df3c1549eb56f9e20 112 SUPERFAMILY SSF55166 13 106 6.67E-14 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS11995 6491bc71e91fc43d38c10d2bc4b7a5b2 481 Hamap MF_00692 UPF0061 protein YdiU [ydiU]. 1 467 45.399 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 CI104_RS11995 6491bc71e91fc43d38c10d2bc4b7a5b2 481 Pfam PF02696 Uncharacterized ACR, YdiU/UPF0061 family 2 453 5.1E-154 T 28-03-2018 IPR003846 Uncharacterised protein family UPF0061 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 TIGRFAM TIGR01822 2am3keto_CoA: glycine C-acetyltransferase 5 397 7.3E-224 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 Gene3D G3DSA:3.90.1150.10 278 397 3.1E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 Gene3D G3DSA:3.90.1150.10 20 98 6.3E-17 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 Hamap MF_00985 2-amino-3-ketobutyrate coenzyme A ligase [kbl]. 2 395 53.938 T 28-03-2018 IPR011282 2-amino-3-ketobutyrate coenzyme A ligase GO:0006567|GO:0008890 KEGG: 00260+2.3.1.29|Reactome: R-HSA-8849175 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 Gene3D G3DSA:3.40.640.10 99 277 7.2E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 SUPERFAMILY SSF53383 4 396 1.02E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS00615 70b03a8abdb6ef31adc9618d1ed8ee2a 398 Pfam PF00155 Aminotransferase class I and II 43 387 1.0E-78 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 SUPERFAMILY SSF53850 102 297 3.8E-23 T 28-03-2018 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 Gene3D G3DSA:3.40.190.10 97 182 7.7E-5 T 28-03-2018 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 Pfam PF03466 LysR substrate binding domain 102 296 9.6E-23 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 Gene3D G3DSA:1.10.10.10 9 93 2.4E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 Gene3D G3DSA:3.40.190.10 183 267 1.3E-11 T 28-03-2018 CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 SUPERFAMILY SSF46785 12 94 7.39E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20745 95ddd9c9ab64284c46ca67c44bae1e30 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 16 71 2.0E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Gene3D G3DSA:3.40.50.140 1 156 5.5E-40 T 28-03-2018 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Gene3D G3DSA:1.10.460.10 483 613 1.7E-16 T 28-03-2018 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Gene3D G3DSA:1.10.460.10 157 350 3.8E-39 T 28-03-2018 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 193 211 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 521 535 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 323 332 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 402 418 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 98 111 1.2E-25 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Gene3D G3DSA:2.70.20.10 364 482 2.4E-22 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Pfam PF01131 DNA topoisomerase 158 593 1.2E-111 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 SUPERFAMILY SSF56712 1 607 1.22E-187 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 317 332 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 SMART SM00436 128 223 7.2E-38 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 SMART SM00437 280 558 1.5E-105 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 TIGRFAM TIGR01056 topB: DNA topoisomerase III 1 643 4.7E-303 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Pfam PF01751 Toprim domain 3 135 5.3E-18 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 Hamap MF_00953 DNA topoisomerase 3 [topB]. 1 644 70.011 T 28-03-2018 IPR005738 DNA topoisomerase III GO:0003677|GO:0003916|GO:0006265 CI104_RS11720 e8ef691778dce1a5408640ea71064c3a 647 SMART SM00493 1 124 2.4E-31 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS00190 3cb90ae109947f439910f65a4c00ac89 337 SUPERFAMILY SSF74650 40 334 4.39E-7 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS00190 3cb90ae109947f439910f65a4c00ac89 337 Pfam PF14486 Domain of unknown function (DUF4432) 34 335 9.5E-16 T 28-03-2018 IPR027839 Protein of unknown function DUF4432 CI104_RS00190 3cb90ae109947f439910f65a4c00ac89 337 Gene3D G3DSA:2.70.98.10 25 337 2.6E-20 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS24900 d1abb365618d5963545653cc114cf049 293 Gene3D G3DSA:3.90.550.10 1 292 4.6E-67 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS24900 d1abb365618d5963545653cc114cf049 293 SUPERFAMILY SSF53448 1 286 3.15E-92 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS24900 d1abb365618d5963545653cc114cf049 293 Pfam PF00483 Nucleotidyl transferase 2 238 3.1E-72 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CI104_RS24900 d1abb365618d5963545653cc114cf049 293 TIGRFAM TIGR01207 rmlA: glucose-1-phosphate thymidylyltransferase 2 286 4.1E-161 T 28-03-2018 IPR005907 Glucose-1-phosphate thymidylyltransferase, short form GO:0008879|GO:0045226 KEGG: 00521+2.7.7.24|KEGG: 00523+2.7.7.24|KEGG: 00525+2.7.7.24|MetaCyc: PWY-3221|MetaCyc: PWY-6808|MetaCyc: PWY-6942|MetaCyc: PWY-6953|MetaCyc: PWY-6973|MetaCyc: PWY-6974|MetaCyc: PWY-6976|MetaCyc: PWY-7104|MetaCyc: PWY-7301|MetaCyc: PWY-7312|MetaCyc: PWY-7315|MetaCyc: PWY-7316|MetaCyc: PWY-7318|MetaCyc: PWY-7413|MetaCyc: PWY-7414|MetaCyc: PWY-7440|MetaCyc: PWY-7657|MetaCyc: PWY-7688|MetaCyc: PWY-7814 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 Pfam PF03466 LysR substrate binding domain 87 262 4.1E-11 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 Gene3D G3DSA:3.40.190.10 83 251 2.0E-10 T 28-03-2018 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 62 1.5E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 SUPERFAMILY SSF46785 2 85 7.5E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 Hamap MF_01233 HTH-type transcriptional regulator HdfR [hdfR]. 1 275 49.903 T 28-03-2018 IPR020890 Transcription regulator HTH, HdfR GO:0003677|GO:0003700|GO:0045892 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 Gene3D G3DSA:1.10.10.10 1 82 1.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.0E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25035 8e4a13d02f97168b4401b5e3a751c65c 277 SUPERFAMILY SSF53850 89 263 1.99E-13 T 28-03-2018 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 TIGRFAM TIGR01142 purT: phosphoribosylglycinamide formyltransferase 2 14 390 7.0E-191 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 Hamap MF_01643 Phosphoribosylglycinamide formyltransferase 2 [purT]. 8 391 51.773 T 28-03-2018 IPR005862 Formate-dependent phosphoribosylglycinamide formyltransferase GO:0000287|GO:0004644|GO:0005524|GO:0009152|GO:0016742 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 Gene3D G3DSA:3.30.1490.20 129 197 5.7E-21 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 SUPERFAMILY SSF56059 113 314 7.07E-55 T 28-03-2018 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 SUPERFAMILY SSF51246 319 390 1.49E-17 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 Pfam PF02222 ATP-grasp domain 123 295 5.3E-56 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 Gene3D G3DSA:3.30.470.20 198 392 1.5E-36 T 28-03-2018 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 Gene3D G3DSA:3.40.50.20 14 112 4.9E-20 T 28-03-2018 CI104_RS15305 8fe65ffefd12bfffcf82e2e779f4bc42 392 SUPERFAMILY SSF52440 3 112 2.59E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS10040 fecae689117de30063ef01589a0a84e1 336 Pfam PF05035 2-keto-3-deoxy-galactonokinase 6 300 3.6E-34 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CI104_RS10040 fecae689117de30063ef01589a0a84e1 336 Gene3D G3DSA:3.30.420.40 1 326 2.6E-5 T 28-03-2018 CI104_RS12025 5a002cd4219cfaabee7eac80ae50d373 97 PIRSF PIRSF036548 3 97 1.4E-37 T 28-03-2018 IPR012206 Ferredoxin-like, FixX GO:0005506 CI104_RS12025 5a002cd4219cfaabee7eac80ae50d373 97 Gene3D G3DSA:3.30.70.20 28 87 9.6E-6 T 28-03-2018 CI104_RS12025 5a002cd4219cfaabee7eac80ae50d373 97 SUPERFAMILY SSF54862 43 91 4.95E-8 T 28-03-2018 CI104_RS12025 5a002cd4219cfaabee7eac80ae50d373 97 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 65 76 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS00945 47dc3dc31454679dd7757c46c1fe19c1 400 TIGRFAM TIGR00890 2A0111: oxalate/formate antiporter family transporter 9 383 6.2E-138 T 28-03-2018 IPR004741 Oxalate/formate antiporter family transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS00945 47dc3dc31454679dd7757c46c1fe19c1 400 Pfam PF07690 Major Facilitator Superfamily 26 230 1.8E-18 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00945 47dc3dc31454679dd7757c46c1fe19c1 400 Gene3D G3DSA:1.20.1250.20 209 399 3.1E-20 T 28-03-2018 CI104_RS00945 47dc3dc31454679dd7757c46c1fe19c1 400 Gene3D G3DSA:1.20.1250.20 1 199 4.3E-22 T 28-03-2018 CI104_RS00945 47dc3dc31454679dd7757c46c1fe19c1 400 SUPERFAMILY SSF103473 7 392 1.7E-47 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 ProSitePatterns PS01135 FtsZ protein signature 2. 96 117 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 SUPERFAMILY SSF55307 203 319 7.33E-43 T 28-03-2018 IPR008280 Tubulin/FtsZ, C-terminal Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 SMART SM00865 206 324 3.4E-56 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 TIGRFAM TIGR00065 ftsZ: cell division protein FtsZ 7 338 8.4E-142 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 Pfam PF00091 Tubulin/FtsZ family, GTPase domain 13 172 8.1E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 Gene3D G3DSA:3.40.50.1440 8 213 1.6E-42 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 Pfam PF12327 FtsZ family, C-terminal domain 221 315 2.4E-37 T 28-03-2018 IPR024757 Cell division protein FtsZ, C-terminal CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 SUPERFAMILY SSF52490 12 207 2.09E-69 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 Hamap MF_00909 Cell division protein FtsZ [ftsZ]. 8 343 38.192 T 28-03-2018 IPR000158 Cell division protein FtsZ GO:0005525 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 SMART SM00864 12 204 6.3E-111 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 ProSitePatterns PS01134 FtsZ protein signature 1. 43 77 - T 28-03-2018 IPR020805 Cell division protein FtsZ, conserved site GO:0005525|GO:0005737 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 Gene3D G3DSA:3.30.1330.20 214 324 1.0E-44 T 28-03-2018 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain Reactome: R-HSA-1445148|Reactome: R-HSA-190840|Reactome: R-HSA-190861|Reactome: R-HSA-2132295|Reactome: R-HSA-2467813|Reactome: R-HSA-2500257|Reactome: R-HSA-3371497|Reactome: R-HSA-380320|Reactome: R-HSA-437239|Reactome: R-HSA-5617833|Reactome: R-HSA-5626467|Reactome: R-HSA-5663220|Reactome: R-HSA-6807878|Reactome: R-HSA-6811434|Reactome: R-HSA-6811436|Reactome: R-HSA-68877|Reactome: R-HSA-8852276|Reactome: R-HSA-8955332|Reactome: R-HSA-983189 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 PRINTS PR00423 Cell division protein FtsZ signature 188 210 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 PRINTS PR00423 Cell division protein FtsZ signature 97 117 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 PRINTS PR00423 Cell division protein FtsZ signature 211 232 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS04925 d001cbb2fd76a7c9e6371ab174041860 383 PRINTS PR00423 Cell division protein FtsZ signature 125 146 2.5E-52 T 28-03-2018 IPR003008 Tubulin/FtsZ, GTPase domain GO:0003924 Reactome: R-HSA-380320 CI104_RS19415 f9fd7790331ed7f921601b9dbc7a66f8 287 SUPERFAMILY SSF56529 62 277 8.9E-67 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS19415 f9fd7790331ed7f921601b9dbc7a66f8 287 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 74 276 4.1E-54 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS19415 f9fd7790331ed7f921601b9dbc7a66f8 287 Gene3D G3DSA:3.90.850.10 29 285 7.2E-65 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS28120 a866952c0858854d113d635b93911f83 84 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 5 74 2.0E-9 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS28120 a866952c0858854d113d635b93911f83 84 SUPERFAMILY SSF46575 1 81 4.45E-36 T 28-03-2018 CI104_RS28120 a866952c0858854d113d635b93911f83 84 Gene3D G3DSA:1.20.58.250 4 66 1.0E-28 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS28120 a866952c0858854d113d635b93911f83 84 Pfam PF06440 DNA polymerase III, theta subunit 3 71 1.6E-34 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 SUPERFAMILY SSF141868 403 642 1.57E-34 T 28-03-2018 IPR001633 EAL domain CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 222 383 5.2E-11 T 28-03-2018 IPR000160 GGDEF domain CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 SMART SM00267 213 385 5.9E-35 T 28-03-2018 IPR000160 GGDEF domain CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 SMART SM00052 395 635 1.2E-56 T 28-03-2018 IPR001633 EAL domain CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 Gene3D G3DSA:3.30.70.270 218 388 2.2E-25 T 28-03-2018 CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 SUPERFAMILY SSF55073 230 387 3.53E-22 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 Pfam PF00563 EAL domain 404 628 4.3E-36 T 28-03-2018 IPR001633 EAL domain CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 Pfam PF17157 Gammaproteobacterial periplasmic sensor domain 34 130 1.3E-31 T 28-03-2018 IPR033423 Gammaproteobacterial periplasmic sensor domain GAPES4 CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 Gene3D G3DSA:3.20.20.450 389 645 1.3E-43 T 28-03-2018 IPR001633 EAL domain CI104_RS02450 182c34d183b00ef7f86be1da07d7d15b 646 Pfam PF00990 Diguanylate cyclase, GGDEF domain 224 380 4.4E-29 T 28-03-2018 IPR000160 GGDEF domain CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SUPERFAMILY SSF55781 26 168 2.09E-12 T 28-03-2018 IPR029016 GAF domain-like CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SMART SM00065 26 174 3.4E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SMART SM00065 202 354 6.2E-24 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Gene3D G3DSA:1.10.8.60 554 610 1.7E-21 T 28-03-2018 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 594 603 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Pfam PF01590 GAF domain 202 344 2.7E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Gene3D G3DSA:3.30.450.40 179 376 5.6E-25 T 28-03-2018 IPR029016 GAF domain-like CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Pfam PF02954 Bacterial regulatory protein, Fis family 645 684 1.5E-5 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SUPERFAMILY SSF55781 184 360 2.84E-22 T 28-03-2018 IPR029016 GAF domain-like CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 405 418 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Pfam PF00158 Sigma-54 interaction domain 381 548 4.1E-70 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Gene3D G3DSA:3.40.50.300 377 553 7.9E-30 T 28-03-2018 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SUPERFAMILY SSF52540 380 617 5.32E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Gene3D G3DSA:1.10.10.60 611 688 1.8E-10 T 28-03-2018 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 Gene3D G3DSA:3.30.450.40 10 170 1.1E-15 T 28-03-2018 IPR029016 GAF domain-like CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SUPERFAMILY SSF46689 593 687 8.06E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS19865 d1e0c9e7c3fd65f9ae320828afbd987c 692 SMART SM00382 401 545 4.9E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS22025 80c13dfb421994f9330d73adae958121 334 Gene3D G3DSA:3.40.50.1370 164 334 9.7E-52 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 SUPERFAMILY SSF53671 2 332 2.75E-99 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 7 332 4.9E-138 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 7 147 1.2E-48 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 52 71 1.2E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 134 145 1.2E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 1.2E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 267 276 1.2E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 156 330 8.8E-55 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 52 59 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 Gene3D G3DSA:3.40.50.1370 5 163 1.1E-56 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 6 333 82.888 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 5.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 229 239 5.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 83 96 5.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 123 137 5.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22025 80c13dfb421994f9330d73adae958121 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 50 64 5.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 SUPERFAMILY SSF56176 344 428 3.82E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 SUPERFAMILY SSF54631 200 335 1.6E-22 T 28-03-2018 CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 SMART SM01091 346 426 6.0E-30 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 Pfam PF03471 Transporter associated domain 347 425 1.4E-22 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 Pfam PF01595 Domain of unknown function DUF21 6 197 1.8E-38 T 28-03-2018 IPR002550 Domain of unknown function DUF21 CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 Pfam PF00571 CBS domain 284 333 0.0026 T 28-03-2018 IPR000644 CBS domain CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 Gene3D G3DSA:3.30.465.10 342 426 2.3E-24 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS22335 052cf73214f5bb72df2f1ed3c2dcc508 445 Gene3D G3DSA:3.10.580.10 191 341 8.6E-22 T 28-03-2018 CI104_RS00790 29ebb832ad612486eeab8900757ba7d4 157 SUPERFAMILY SSF54862 1 143 1.67E-39 T 28-03-2018 CI104_RS00790 29ebb832ad612486eeab8900757ba7d4 157 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS00790 29ebb832ad612486eeab8900757ba7d4 157 Pfam PF13247 4Fe-4S dicluster domain 54 140 1.1E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS00790 29ebb832ad612486eeab8900757ba7d4 157 Gene3D G3DSA:3.30.70.20 113 153 8.7E-7 T 28-03-2018 CI104_RS00790 29ebb832ad612486eeab8900757ba7d4 157 Gene3D G3DSA:3.30.70.20 71 112 4.6E-16 T 28-03-2018 CI104_RS00790 29ebb832ad612486eeab8900757ba7d4 157 Gene3D G3DSA:3.30.70.20 2 70 1.1E-11 T 28-03-2018 CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 24 129 7.1E-36 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 SUPERFAMILY SSF51735 139 304 8.52E-22 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 Gene3D G3DSA:3.40.50.720 156 282 2.0E-17 T 28-03-2018 CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 SUPERFAMILY SSF50129 1 170 6.54E-53 T 28-03-2018 IPR011032 GroES-like CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 58 72 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 Gene3D G3DSA:3.90.180.10 1 155 1.7E-47 T 28-03-2018 CI104_RS12755 531b497928c15a079ff2cc4aff88a98b 339 Pfam PF00107 Zinc-binding dehydrogenase 171 296 7.5E-17 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 Gene3D G3DSA:3.30.70.20 126 179 1.4E-8 T 28-03-2018 CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 89 100 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 Gene3D G3DSA:3.30.70.20 71 125 8.2E-18 T 28-03-2018 CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 Gene3D G3DSA:3.30.70.20 1 18 0.018 T 28-03-2018 CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 Pfam PF12798 4Fe-4S binding domain 131 151 0.067 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 SUPERFAMILY SSF54862 1 170 2.51E-43 T 28-03-2018 CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 Gene3D G3DSA:3.30.70.20 19 70 5.4E-11 T 28-03-2018 CI104_RS19770 457635df5b71020d9722eb3a977c1e7d 181 Pfam PF13247 4Fe-4S dicluster domain 55 104 4.2E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF13412 Winged helix-turn-helix DNA-binding 12 59 2.8E-21 T 28-03-2018 CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:1.10.10.10 8 63 6.1E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF54909 74 157 2.68E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 SUPERFAMILY SSF46785 12 70 4.01E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 Pfam PF01037 Lrp/AsnC ligand binding domain 78 152 6.0E-25 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 ProSitePatterns PS00519 AsnC-type HTH domain signature. 30 56 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 Gene3D G3DSA:3.30.70.920 64 158 1.0E-27 T 28-03-2018 CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 12 28 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 28 39 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 39 58 6.2E-23 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS08915 31552388ae2bc68bbd1b4365e3e3d017 164 SMART SM00344 12 121 2.1E-55 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 Gene3D G3DSA:2.60.120.280 9 168 3.2E-18 T 28-03-2018 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 Gene3D G3DSA:1.10.10.60 169 233 8.5E-9 T 28-03-2018 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 Gene3D G3DSA:1.10.10.60 234 285 1.7E-16 T 28-03-2018 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 264 280 9.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 249 264 9.1E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 Pfam PF12833 Helix-turn-helix domain 208 282 1.1E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 SMART SM00342 197 280 3.6E-27 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 SUPERFAMILY SSF46689 181 231 3.36E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 Pfam PF02311 AraC-like ligand binding domain 37 162 6.3E-15 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 SUPERFAMILY SSF51215 20 166 3.4E-20 T 28-03-2018 CI104_RS09885 5449b42b027c2ddaae304db5dc4178cc 286 SUPERFAMILY SSF46689 233 282 1.08E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 Gene3D G3DSA:1.10.1140.10 348 458 1.5E-45 T 28-03-2018 IPR024034 ATPase, F1/V1 complex, beta/alpha subunit, C-terminal KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 SUPERFAMILY SSF50615 3 75 1.75E-24 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 SUPERFAMILY SSF47917 345 459 4.45E-55 T 28-03-2018 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 Gene3D G3DSA:3.40.50.300 76 347 7.2E-91 T 28-03-2018 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 Gene3D G3DSA:2.40.10.170 1 75 5.7E-30 T 28-03-2018 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 SMART SM00382 142 327 4.2E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 130 342 3.8E-64 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 SUPERFAMILY SSF52540 77 348 1.02E-90 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 Hamap MF_01347 ATP synthase subunit beta [atpB]. 1 460 56.961 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 333 342 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 TIGRFAM TIGR01039 atpD: ATP synthase F1, beta subunit 3 460 1.0E-262 T 28-03-2018 IPR005722 ATP synthase, F1 complex, beta subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-2151201|Reactome: R-HSA-8949613 CI104_RS25185 a9387f5ce9366b76e6bafb796a2f303b 460 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 6 72 3.6E-20 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 Pfam PF00271 Helicase conserved C-terminal domain 377 469 8.5E-14 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 SMART SM00487 137 356 1.7E-11 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 Gene3D G3DSA:3.40.50.300 357 667 2.8E-29 T 28-03-2018 CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 Gene3D G3DSA:3.40.50.300 87 356 1.8E-22 T 28-03-2018 CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 SMART SM00490 388 470 3.0E-13 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 SUPERFAMILY SSF52540 185 482 1.39E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21870 c75e42ecd5f21345200553189bd9df20 826 Pfam PF00270 DEAD/DEAH box helicase 144 322 5.6E-16 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS13300 31bea1d5e0bf4b4071ff1a40bd8fa70b 205 Pfam PF13417 Glutathione S-transferase, N-terminal domain 17 80 4.0E-9 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS13300 31bea1d5e0bf4b4071ff1a40bd8fa70b 205 SUPERFAMILY SSF47616 79 201 7.38E-16 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS13300 31bea1d5e0bf4b4071ff1a40bd8fa70b 205 Gene3D G3DSA:1.20.1050.10 101 205 2.5E-10 T 28-03-2018 CI104_RS13300 31bea1d5e0bf4b4071ff1a40bd8fa70b 205 SUPERFAMILY SSF52833 2 79 2.55E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS13300 31bea1d5e0bf4b4071ff1a40bd8fa70b 205 Gene3D G3DSA:3.40.30.10 1 100 8.0E-14 T 28-03-2018 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 Pfam PF01212 Beta-eliminating lyase 49 437 1.2E-90 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 ProSitePatterns PS00853 Beta-eliminating lyases pyridoxal-phosphate attachment site. 260 278 - T 28-03-2018 IPR018176 Tryptophanase, conserved site KEGG: 00380+4.1.99.1 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 Hamap MF_00544 Tryptophanase [tnaA]. 4 471 100.177 T 28-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 Gene3D G3DSA:3.90.1150.10 289 469 1.5E-67 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 Gene3D G3DSA:3.90.1150.10 20 112 7.6E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 PIRSF PIRSF001386 3 471 6.4E-202 T 28-03-2018 IPR011166 Beta-eliminating lyase family GO:0009072|GO:0016830 KEGG: 00380+4.1.99.1 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 TIGRFAM TIGR02617 tnaA_trp_ase: tryptophanase 5 471 1.6E-296 T 28-03-2018 IPR013440 Tryptophanase GO:0006568|GO:0009034 KEGG: 00380+4.1.99.1 CI104_RS25255 c396a54d8a51c1927a519e69f62b85a2 471 SUPERFAMILY SSF53383 6 471 8.02E-124 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Gene3D G3DSA:3.40.50.300 92 297 6.8E-40 T 28-03-2018 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 SMART SM00962 100 296 4.1E-120 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 269 282 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Hamap MF_00306 Signal recognition particle 54 kDa protein [srp54]. 5 439 35.024 T 28-03-2018 IPR022941 Signal recognition particle, SRP54 subunit GO:0003924|GO:0005525|GO:0006614|GO:0048500 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 SMART SM00963 1 86 2.9E-37 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 TIGRFAM TIGR00959 ffh: signal recognition particle protein 2 429 7.3E-182 T 28-03-2018 IPR004780 Signal recognition particle protein Ffh GO:0003924|GO:0005525|GO:0006614|GO:0048500 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Pfam PF02881 SRP54-type protein, helical bundle domain 5 82 3.8E-23 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Gene3D G3DSA:1.20.120.140 1 91 1.3E-30 T 28-03-2018 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Pfam PF02978 Signal peptide binding domain 329 427 4.3E-33 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 SMART SM00382 99 247 7.9E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Gene3D G3DSA:1.10.260.30 328 432 5.7E-39 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 Pfam PF00448 SRP54-type protein, GTPase domain 100 296 1.1E-75 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 SUPERFAMILY SSF52540 42 354 3.59E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19035 e92f50074ba7344103303ca0b7ba649b 453 SUPERFAMILY SSF47446 298 431 1.7E-46 T 28-03-2018 IPR004125 Signal recognition particle, SRP54 subunit, M-domain GO:0006614|GO:0008312|GO:0048500 Reactome: R-HSA-1799339 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 SMART SM00387 31 175 6.0E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Hamap MF_01898 DNA gyrase subunit B [gyrB]. 2 804 115.595 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Gene3D G3DSA:3.30.230.10 221 392 2.8E-66 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 ProSitePatterns PS00177 DNA topoisomerase II signature. 422 430 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 TIGRFAM TIGR01059 gyrB: DNA gyrase, B subunit 5 804 0.0 T 28-03-2018 IPR011557 DNA gyrase, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 32 172 6.5E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 SUPERFAMILY SSF54211 221 392 7.4E-62 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Gene3D G3DSA:3.30.565.10 17 220 2.8E-75 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Pfam PF01751 Toprim domain 419 531 4.1E-18 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 470 479 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 220 242 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 312 328 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 181 196 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 196 209 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 757 769 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 773 789 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 5 15 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 360 374 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR01159 DNA gyrase subunit B signature 374 394 2.1E-80 T 28-03-2018 IPR000565 DNA topoisomerase, type IIA, subunit B GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 SUPERFAMILY SSF55874 4 220 4.32E-77 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Pfam PF00204 DNA gyrase B 221 390 3.7E-59 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 SMART SM00433 35 797 2.4E-282 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 733 793 6.6E-30 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 487 503 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 525 537 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 113 127 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 268 281 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 505 522 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 35 50 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 70 83 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 736 752 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 PRINTS PR00418 DNA topoisomerase II family signature 420 434 8.1E-71 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 Gene3D G3DSA:3.40.50.670 402 801 2.7E-108 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 SUPERFAMILY SSF56719 730 795 1.46E-86 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CI104_RS00020 f4f992c004fb61c7683c7bcd654bbe41 804 SUPERFAMILY SSF56719 394 560 1.46E-86 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 Gene3D G3DSA:3.40.930.10 145 279 0.0011 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 Gene3D G3DSA:3.40.930.10 3 143 1.2E-34 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 287 368 3.2E-21 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 326 341 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 Gene3D G3DSA:3.30.1340.10 282 369 5.2E-26 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 5 139 2.5E-29 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 297 304 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 SUPERFAMILY SSF55594 288 375 1.22E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 Pfam PF00381 PTS HPr component phosphorylation site 288 368 6.4E-25 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 SUPERFAMILY SSF55804 150 276 6.41E-11 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 SUPERFAMILY SSF55804 2 140 2.09E-39 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 PRINTS PR00107 Phosphocarrier protein signature 340 357 2.1E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 PRINTS PR00107 Phosphocarrier protein signature 297 313 2.1E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 PRINTS PR00107 Phosphocarrier protein signature 325 340 2.1E-18 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS16965 12342ddb2430526c5a722dfc22a3eef4 376 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 47 63 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 Pfam PF01555 DNA methylase 21 200 3.6E-32 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 SUPERFAMILY SSF53335 3 207 6.46E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 Gene3D G3DSA:3.40.50.150 2 220 1.5E-41 T 28-03-2018 CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 144 161 1.7E-21 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 186 206 1.7E-21 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 1.7E-21 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS27910 2b33d7b8462d237bfe2a5b9ea57db36e 225 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 163 181 1.7E-21 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 Gene3D G3DSA:1.10.10.10 123 221 2.9E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 SMART SM00862 145 216 1.1E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 3.4E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 SMART SM00448 1 112 9.1E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 Gene3D G3DSA:3.40.50.2300 1 122 2.9E-31 T 28-03-2018 CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 SUPERFAMILY SSF52172 1 173 2.11E-35 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS03900 30a539a4dd7bd97927e290dba8824a78 221 Pfam PF00072 Response regulator receiver domain 3 112 1.3E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS14575 f9702fff6ca84bdc4b506c36321dbe07 356 Gene3D G3DSA:3.30.1180.20 184 356 4.0E-54 T 28-03-2018 CI104_RS14575 f9702fff6ca84bdc4b506c36321dbe07 356 Pfam PF02733 Dak1 domain 18 350 7.3E-127 T 28-03-2018 IPR004006 DhaK domain GO:0004371|GO:0006071 Reactome: R-HSA-168928|Reactome: R-HSA-70350 CI104_RS14575 f9702fff6ca84bdc4b506c36321dbe07 356 SUPERFAMILY SSF82549 10 355 4.71E-125 T 28-03-2018 CI104_RS14575 f9702fff6ca84bdc4b506c36321dbe07 356 Gene3D G3DSA:3.40.50.10440 11 183 1.0E-66 T 28-03-2018 CI104_RS14575 f9702fff6ca84bdc4b506c36321dbe07 356 TIGRFAM TIGR02363 dhaK1: dihydroxyacetone kinase, DhaK subunit 1 351 1.3E-153 T 28-03-2018 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CI104_RS11280 878f2bcd7a5137adc7973a18aaa9c3f2 184 PIRSF PIRSF004395 1 184 1.7E-88 T 28-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail CI104_RS11280 878f2bcd7a5137adc7973a18aaa9c3f2 184 Pfam PF06763 Prophage minor tail protein Z (GPZ) 3 184 1.3E-72 T 28-03-2018 IPR010633 Bacteriophage lambda, GpZ, minor tail CI104_RS14010 590792333aa781f6ce25dd05f22d9409 296 Gene3D G3DSA:1.10.3720.10 14 285 9.6E-29 T 28-03-2018 CI104_RS14010 590792333aa781f6ce25dd05f22d9409 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 292 4.4E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14010 590792333aa781f6ce25dd05f22d9409 296 SUPERFAMILY SSF161098 90 277 2.62E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14010 590792333aa781f6ce25dd05f22d9409 296 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 16 66 2.4E-9 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 110 122 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 94 110 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 58 77 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 27 42 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 77 94 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PRINTS PR01034 Ribosomal protein S12 signature 42 57 5.2E-60 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 Gene3D G3DSA:2.40.50.140 1 124 1.5E-63 T 28-03-2018 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 PIRSF PIRSF002133 1 124 9.5E-54 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 Hamap MF_00403_B 30S ribosomal protein S12 [rpsL]. 1 123 38.634 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 SUPERFAMILY SSF50249 3 123 1.63E-51 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 TIGRFAM TIGR00981 rpsL_bact: ribosomal protein uS12 1 124 2.6E-70 T 28-03-2018 IPR005679 Ribosomal protein S12, bacterial-type GO:0003735|GO:0006412|GO:0015935 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 ProSitePatterns PS00055 Ribosomal protein S12 signature. 43 50 - T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02000 29495e0d2573e3eb61572cc610d4e48b 124 Pfam PF00164 Ribosomal protein S12/S23 12 123 5.1E-43 T 28-03-2018 IPR006032 Ribosomal protein S12/S23 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS10075 40353b5c2a2c82eaf2c3ea794484a4f4 626 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 283 484 3.2E-8 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CI104_RS10075 40353b5c2a2c82eaf2c3ea794484a4f4 626 Gene3D G3DSA:3.40.30.10 499 609 5.8E-8 T 28-03-2018 CI104_RS10075 40353b5c2a2c82eaf2c3ea794484a4f4 626 Pfam PF11412 Disulphide bond corrector protein DsbC 42 147 1.1E-17 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CI104_RS10075 40353b5c2a2c82eaf2c3ea794484a4f4 626 SUPERFAMILY SSF52833 507 618 6.87E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS10075 40353b5c2a2c82eaf2c3ea794484a4f4 626 Gene3D G3DSA:2.60.40.1250 29 156 1.4E-7 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CI104_RS10075 40353b5c2a2c82eaf2c3ea794484a4f4 626 Pfam PF13899 Thioredoxin-like 511 590 1.1E-12 T 28-03-2018 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 PRINTS PR00050 Cold shock protein signature 43 61 5.0E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 PRINTS PR00050 Cold shock protein signature 28 37 5.0E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 PRINTS PR00050 Cold shock protein signature 7 22 5.0E-17 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 SMART SM00357 6 70 3.1E-30 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 Pfam PF00313 'Cold-shock' DNA-binding domain 5 69 3.6E-32 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 PIRSF PIRSF002599 1 70 2.4E-25 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 SUPERFAMILY SSF50249 3 69 4.95E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 ProSitePatterns PS00352 'Cold-shock' domain signature. 18 37 - T 28-03-2018 IPR019844 Cold-shock conserved site CI104_RS11510 f6bb3ab2255761a3c3698583db89017a 70 Gene3D G3DSA:2.40.50.140 4 70 4.5E-29 T 28-03-2018 CI104_RS19685 fc4f077eb268a92f29017fcaaedd8fa3 61 Pfam PF02599 Global regulator protein family 1 52 2.5E-27 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CI104_RS19685 fc4f077eb268a92f29017fcaaedd8fa3 61 Hamap MF_00167 Carbon storage regulator [csrA]. 1 61 20.514 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CI104_RS19685 fc4f077eb268a92f29017fcaaedd8fa3 61 SUPERFAMILY SSF117130 1 54 3.66E-21 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CI104_RS19685 fc4f077eb268a92f29017fcaaedd8fa3 61 TIGRFAM TIGR00202 csrA: carbon storage regulator 1 57 2.0E-31 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CI104_RS19685 fc4f077eb268a92f29017fcaaedd8fa3 61 ProDom PD009007 STORAGE CARBON REGULATOR RNA-BINDING HOMOLOG CSRA REGULATOR GLOBAL PLASMID RSMA 1 48 2.0E-20 T 28-03-2018 IPR003751 Carbon storage regulator GO:0003723|GO:0006109|GO:0006402 CI104_RS05430 74f4c8d85160abf1d29fa676dadfb927 235 ProSitePatterns PS01318 TsaA-like domain signature. 87 98 - T 28-03-2018 IPR023368 Uncharacterised protein family UPF0066, conserved site CI104_RS05430 74f4c8d85160abf1d29fa676dadfb927 235 TIGRFAM TIGR00104 tRNA_TsaA: tRNA-Thr(GGU) m(6)t(6)A37 methyltransferase TsaA 1 149 4.8E-60 T 28-03-2018 IPR023370 TsaA-like domain CI104_RS05430 74f4c8d85160abf1d29fa676dadfb927 235 SUPERFAMILY SSF118196 1 229 4.05E-85 T 28-03-2018 IPR023370 TsaA-like domain CI104_RS05430 74f4c8d85160abf1d29fa676dadfb927 235 Pfam PF01980 Uncharacterised protein family UPF0066 21 142 4.3E-40 T 28-03-2018 IPR023370 TsaA-like domain CI104_RS05430 74f4c8d85160abf1d29fa676dadfb927 235 Gene3D G3DSA:3.30.2310.10 150 231 7.1E-24 T 28-03-2018 CI104_RS05430 74f4c8d85160abf1d29fa676dadfb927 235 Gene3D G3DSA:2.40.30.70 5 149 9.0E-52 T 28-03-2018 IPR023370 TsaA-like domain CI104_RS02830 d2433c81b53dbd7904408f69a7f1c5b3 110 PRINTS PR01651 Protein-export SecG membrane protein signature 3 23 7.8E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CI104_RS02830 d2433c81b53dbd7904408f69a7f1c5b3 110 PRINTS PR01651 Protein-export SecG membrane protein signature 54 76 7.8E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CI104_RS02830 d2433c81b53dbd7904408f69a7f1c5b3 110 PRINTS PR01651 Protein-export SecG membrane protein signature 23 37 7.8E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CI104_RS02830 d2433c81b53dbd7904408f69a7f1c5b3 110 PRINTS PR01651 Protein-export SecG membrane protein signature 38 54 7.8E-44 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CI104_RS02830 d2433c81b53dbd7904408f69a7f1c5b3 110 Pfam PF03840 Preprotein translocase SecG subunit 5 72 4.1E-22 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CI104_RS02830 d2433c81b53dbd7904408f69a7f1c5b3 110 TIGRFAM TIGR00810 secG: preprotein translocase, SecG subunit 3 74 2.8E-27 T 28-03-2018 IPR004692 Preprotein translocase SecG subunit GO:0009306|GO:0015450|GO:0016021 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 Pfam PF01113 Dihydrodipicolinate reductase, N-terminus 6 129 4.1E-42 T 28-03-2018 IPR000846 Dihydrodipicolinate reductase, N-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 Gene3D G3DSA:3.40.50.720 1 126 1.7E-28 T 28-03-2018 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 ProSitePatterns PS01298 Dihydrodipicolinate reductase signature. 154 171 - T 28-03-2018 IPR022664 Dihydrodipicolinate reductase, conserved site GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 Hamap MF_00102 4-hydroxy-tetrahydrodipicolinate reductase [dapB]. 6 269 35.289 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 Gene3D G3DSA:3.30.360.10 130 238 2.2E-35 T 28-03-2018 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 SUPERFAMILY SSF51735 240 271 3.44E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 SUPERFAMILY SSF51735 5 130 3.44E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 TIGRFAM TIGR00036 dapB: 4-hydroxy-tetrahydrodipicolinate reductase 6 269 7.1E-112 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 SUPERFAMILY SSF55347 131 240 1.81E-37 T 28-03-2018 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 PIRSF PIRSF000161 4 272 1.5E-90 T 28-03-2018 IPR023940 Dihydrodipicolinate reductase GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS04610 841a10aa00600e36f2cfc9cee9f3d38b 273 Pfam PF05173 Dihydrodipicolinate reductase, C-terminus 132 268 1.1E-42 T 28-03-2018 IPR022663 Dihydrodipicolinate reductase, C-terminal GO:0008839|GO:0009089|GO:0055114 KEGG: 00261+1.17.1.8|KEGG: 00300+1.17.1.8|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 9 111 1.3E-30 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 Gene3D G3DSA:3.10.20.30 1 106 4.5E-29 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 Gene3D G3DSA:1.10.1060.10 107 242 1.6E-26 T 28-03-2018 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 SUPERFAMILY SSF46548 107 229 6.98E-31 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 58 66 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 11 229 1.2E-96 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 SUPERFAMILY SSF54292 4 106 4.56E-29 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS22620 bc6ddf30d4bf3d5635687ea5136fd297 244 Pfam PF13183 4Fe-4S dicluster domain 146 219 2.9E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS21590 4adfbe0f6eaed9e858b0cea23e25a92a 139 Gene3D G3DSA:2.60.120.430 17 139 1.0E-24 T 28-03-2018 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 533 551 1.5E-35 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 595 609 1.5E-35 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 491 509 1.5E-35 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 562 580 1.5E-35 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 SUPERFAMILY SSF81923 1 141 2.75E-58 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Gene3D G3DSA:1.10.8.60 351 437 2.0E-27 T 28-03-2018 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Pfam PF07724 AAA domain (Cdc48 subfamily) 486 647 4.7E-47 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Gene3D G3DSA:3.40.50.300 165 350 2.1E-28 T 28-03-2018 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Gene3D G3DSA:1.10.1780.10 1 143 1.6E-28 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 SUPERFAMILY SSF52540 169 426 1.72E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 518 536 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 653 733 4.6E-25 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 SMART SM01086 653 744 5.3E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 SUPERFAMILY SSF52540 437 747 3.43E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 SMART SM00382 206 351 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 SMART SM00382 487 654 2.7E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 302 314 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Gene3D G3DSA:3.40.50.300 442 652 1.8E-41 T 28-03-2018 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 211 342 5.0E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Gene3D G3DSA:1.10.8.60 653 758 3.2E-25 T 28-03-2018 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 13 62 7.9E-15 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS08855 d67f461aadd4943f92e70262a8770c34 758 TIGRFAM TIGR02639 ClpA: ATP-dependent Clp protease ATP-binding subunit ClpA 3 734 0.0 T 28-03-2018 IPR013461 ATP-dependent Clp protease ATP-binding subunit ClpA GO:0004176 CI104_RS05120 d97be7ea6fc211524a98811d2d581ab8 220 Pfam PF00484 Carbonic anhydrase 38 187 1.8E-50 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS05120 d97be7ea6fc211524a98811d2d581ab8 220 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS05120 d97be7ea6fc211524a98811d2d581ab8 220 Gene3D G3DSA:3.40.1050.10 1 220 5.0E-74 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS05120 d97be7ea6fc211524a98811d2d581ab8 220 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 42 49 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS05120 d97be7ea6fc211524a98811d2d581ab8 220 SMART SM00947 30 192 3.4E-69 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS05120 d97be7ea6fc211524a98811d2d581ab8 220 SUPERFAMILY SSF53056 2 213 2.49E-74 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS19490 02cec02fa4b792225864491a92f21bd4 422 Hamap MF_00990 L-2-hydroxyglutarate oxidase LhgO [lhgO]. 1 422 87.735 T 28-03-2018 IPR030862 L-2-hydroxyglutarate oxidase LhgO GO:0034419 KEGG: 00630+1.1.3.15|MetaCyc: PWY-181 CI104_RS19490 02cec02fa4b792225864491a92f21bd4 422 Pfam PF01266 FAD dependent oxidoreductase 3 390 5.9E-70 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CI104_RS19490 02cec02fa4b792225864491a92f21bd4 422 Gene3D G3DSA:3.30.9.10 206 352 2.5E-19 T 28-03-2018 CI104_RS19490 02cec02fa4b792225864491a92f21bd4 422 Gene3D G3DSA:3.30.9.10 95 205 6.4E-19 T 28-03-2018 CI104_RS19490 02cec02fa4b792225864491a92f21bd4 422 Gene3D G3DSA:3.50.50.60 2 94 0.016 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19490 02cec02fa4b792225864491a92f21bd4 422 SUPERFAMILY SSF51905 1 287 2.81E-50 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19070 b5bfc75a13373c33ec20e3c5a45e1e28 114 Gene3D G3DSA:3.30.1450.10 35 107 2.7E-10 T 28-03-2018 CI104_RS19070 b5bfc75a13373c33ec20e3c5a45e1e28 114 Pfam PF04355 SmpA / OmlA family 35 104 2.1E-27 T 28-03-2018 IPR007450 Lipoprotein SmpA/OmlA GO:0019867 CI104_RS19070 b5bfc75a13373c33ec20e3c5a45e1e28 114 Hamap MF_00925 Outer membrane protein assembly factor BamE [bamE]. 4 112 33.929 T 28-03-2018 IPR026592 Outer membrane protein assembly factor BamE CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 4 14 9.2E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 14 24 9.2E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 SUPERFAMILY SSF53822 75 332 1.54E-56 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 ProSitePatterns PS00356 LacI-type HTH domain signature. 5 23 - T 28-03-2018 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 Pfam PF00356 Bacterial regulatory proteins, lacI family 4 49 8.0E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 SMART SM00354 2 72 1.1E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 SUPERFAMILY SSF47413 2 57 2.66E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 Gene3D G3DSA:1.10.260.40 19 54 3.7E-22 T 28-03-2018 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 Gene3D G3DSA:3.40.50.2300 55 183 3.9E-24 T 28-03-2018 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 Gene3D G3DSA:3.40.50.2300 184 325 2.9E-30 T 28-03-2018 CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 Gene3D G3DSA:1.10.10.10 2 18 0.04 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13915 bf6d05c3e34cd3975572839202dbe3db 336 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 77 326 1.7E-21 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 TIGRFAM TIGR01307 pgm_bpd_ind: phosphoglycerate mutase (2,3-diphosphoglycerate-independent) 6 511 9.1E-245 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 PIRSF PIRSF001492 1 514 1.1E-207 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 Hamap MF_01038 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [gpmI]. 6 512 50.028 T 28-03-2018 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent GO:0004619|GO:0006007 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 Pfam PF06415 BPG-independent PGAM N-terminus (iPGM_N) 86 299 1.0E-83 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 SUPERFAMILY SSF53649 5 79 7.85E-74 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 SUPERFAMILY SSF53649 315 510 7.85E-74 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 Pfam PF01676 Metalloenzyme superfamily 6 500 4.2E-83 T 28-03-2018 IPR006124 Metalloenzyme GO:0003824|GO:0046872 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 Gene3D G3DSA:3.40.720.10 306 513 1.7E-37 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 Gene3D G3DSA:3.20.20.370 1 51 0.23 T 28-03-2018 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 Gene3D G3DSA:3.40.1450.10 79 305 6.9E-97 T 28-03-2018 CI104_RS00640 ddb9f71f70b8b7d7040c329e72859670 514 SUPERFAMILY SSF64158 79 310 1.26E-85 T 28-03-2018 IPR011258 BPG-independent PGAM, N-terminal GO:0004619|GO:0005737|GO:0006007|GO:0030145 KEGG: 00010+5.4.2.12|KEGG: 00260+5.4.2.12|KEGG: 00680+5.4.2.12|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS15505 7c91d41dc143cf0883db2e15eac9216c 316 Pfam PF05229 Spore Coat Protein U domain 178 312 8.1E-32 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS15505 7c91d41dc143cf0883db2e15eac9216c 316 Pfam PF05229 Spore Coat Protein U domain 16 152 1.4E-7 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS15505 7c91d41dc143cf0883db2e15eac9216c 316 SMART SM00972 90 154 0.12 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS15505 7c91d41dc143cf0883db2e15eac9216c 316 SMART SM00972 250 313 2.1E-16 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS15505 7c91d41dc143cf0883db2e15eac9216c 316 Gene3D G3DSA:2.60.40.1090 23 158 1.7E-5 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15505 7c91d41dc143cf0883db2e15eac9216c 316 Gene3D G3DSA:2.60.40.1090 164 316 0.049 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 Pfam PF13377 Periplasmic binding protein-like domain 168 329 5.3E-36 T 28-03-2018 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 Gene3D G3DSA:1.10.260.40 2 55 1.6E-20 T 28-03-2018 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 SMART SM00354 1 71 3.5E-36 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 Gene3D G3DSA:3.40.50.2300 174 311 8.3E-42 T 28-03-2018 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 4.1E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 SUPERFAMILY SSF47413 1 59 3.3E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.6E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.6E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 SUPERFAMILY SSF53822 60 332 3.53E-84 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS20415 8ebadb81b52ddfbd608a5589c89dc249 342 Gene3D G3DSA:3.40.50.2300 56 173 2.1E-30 T 28-03-2018 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 SMART SM00420 6 58 4.5E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 Pfam PF08220 DeoR-like helix-turn-helix domain 6 58 6.1E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 Gene3D G3DSA:3.40.50.1360 73 239 1.1E-34 T 28-03-2018 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 SUPERFAMILY SSF46785 5 73 6.03E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 SMART SM01134 73 233 5.0E-67 T 28-03-2018 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.3E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.3E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 SUPERFAMILY SSF100950 77 234 3.35E-27 T 28-03-2018 CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 Pfam PF00455 DeoR C terminal sensor domain 76 231 1.6E-48 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS05060 3d86ef2bc66ffeaef4de43bb9e48e53c 255 Gene3D G3DSA:1.10.10.10 2 72 9.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 SUPERFAMILY SSF54975 1 133 6.21E-36 T 28-03-2018 IPR001792 Acylphosphatase-like domain KEGG: 00620+3.6.1.7|KEGG: 00627+3.6.1.7 CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 SMART SM01034 2 94 1.4E-35 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 Gene3D G3DSA:3.20.20.450 151 392 1.4E-44 T 28-03-2018 IPR001633 EAL domain CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 SUPERFAMILY SSF141868 167 389 2.09E-47 T 28-03-2018 IPR001633 EAL domain CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 Pfam PF00563 EAL domain 170 389 1.9E-45 T 28-03-2018 IPR001633 EAL domain CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 SMART SM00052 151 394 2.9E-28 T 28-03-2018 IPR001633 EAL domain CI104_RS11435 0181fdd53b8282785f21cb4ebc48129e 406 Pfam PF04940 Sensors of blue-light using FAD 2 92 1.7E-23 T 28-03-2018 IPR007024 BLUF domain GO:0009882|GO:0071949 CI104_RS28605 a15a1d7c0bd26fdf1280889215a644cb 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 1.3E-46 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS28605 a15a1d7c0bd26fdf1280889215a644cb 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 1.1E-128 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS24485 255e32584bf2bde0ce0ce3e5906ea4c0 413 Pfam PF07221 N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase) 32 387 2.6E-127 T 28-03-2018 CI104_RS24485 255e32584bf2bde0ce0ce3e5906ea4c0 413 Hamap MF_00998 Sulfoquinovose isomerase. 1 413 84.977 T 28-03-2018 IPR030875 Sulfoquinovose isomerase GO:0061593 MetaCyc: PWY-7446 CI104_RS24485 255e32584bf2bde0ce0ce3e5906ea4c0 413 Gene3D G3DSA:1.50.10.10 1 413 5.0E-79 T 28-03-2018 CI104_RS24485 255e32584bf2bde0ce0ce3e5906ea4c0 413 SUPERFAMILY SSF48208 3 409 7.37E-116 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS07600 30217454b750348df9a26d25ab4aa7c6 302 Gene3D G3DSA:3.40.190.10 170 302 4.8E-19 T 28-03-2018 CI104_RS07600 30217454b750348df9a26d25ab4aa7c6 302 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 42 271 2.3E-48 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS07600 30217454b750348df9a26d25ab4aa7c6 302 SUPERFAMILY SSF53850 11 274 9.75E-64 T 28-03-2018 CI104_RS07600 30217454b750348df9a26d25ab4aa7c6 302 SMART SM00062 41 273 1.7E-67 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS07600 30217454b750348df9a26d25ab4aa7c6 302 Gene3D G3DSA:3.40.190.10 4 169 1.7E-32 T 28-03-2018 CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 Gene3D G3DSA:1.10.490.10 5 153 3.8E-15 T 28-03-2018 CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 Gene3D G3DSA:3.30.70.270 288 460 4.3E-52 T 28-03-2018 CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 Pfam PF00990 Diguanylate cyclase, GGDEF domain 297 451 2.2E-49 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 SUPERFAMILY SSF55073 300 457 8.24E-47 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 SUPERFAMILY SSF46458 7 151 3.67E-21 T 28-03-2018 IPR009050 Globin-like CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 297 455 1.0E-52 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 SMART SM00267 283 456 1.1E-68 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13050 74ddfaa6be7388a6e241df84120fd631 460 Pfam PF11563 Protoglobin 28 154 1.3E-8 T 28-03-2018 CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 Gene3D G3DSA:1.10.10.10 1 87 2.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 Gene3D G3DSA:3.40.190.10 92 178 2.3E-10 T 28-03-2018 CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 Gene3D G3DSA:3.40.190.10 179 263 2.1E-15 T 28-03-2018 CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 SUPERFAMILY SSF46785 5 114 6.42E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 SUPERFAMILY SSF53850 92 300 2.53E-39 T 28-03-2018 CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.9E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS21545 1226a57b15d9b4a192bf9dc753fec4f1 308 Pfam PF03466 LysR substrate binding domain 93 296 2.7E-33 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 159 179 - T 28-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 Pfam PF01012 Electron transfer flavoprotein domain 28 210 5.1E-37 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 PIRSF PIRSF000090 1 256 3.0E-65 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 SMART SM00893 22 215 1.6E-37 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 Hamap MF_01055 Protein FixA [fixA]. 1 257 54.426 T 28-03-2018 IPR023463 Electron transfer flavoprotein, FixA subunit GO:0009055|GO:0009437 CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 SUPERFAMILY SSF52402 1 253 1.26E-59 T 28-03-2018 CI104_RS04660 7165f18fa253fd4488a41a126e2f4c09 257 Gene3D G3DSA:3.40.50.620 1 255 2.0E-52 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS04195 8927c123271bfb9c98785cc1c6e71e44 234 Pfam PF01168 Alanine racemase, N-terminal domain 7 229 2.2E-31 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS04195 8927c123271bfb9c98785cc1c6e71e44 234 SUPERFAMILY SSF51419 1 227 9.55E-80 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS04195 8927c123271bfb9c98785cc1c6e71e44 234 ProSitePatterns PS01211 Uncharacterized protein family UPF0001 signature. 79 93 - T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CI104_RS04195 8927c123271bfb9c98785cc1c6e71e44 234 Gene3D G3DSA:3.20.20.10 1 234 1.8E-69 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS04195 8927c123271bfb9c98785cc1c6e71e44 234 PIRSF PIRSF004848 1 234 2.2E-73 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CI104_RS04195 8927c123271bfb9c98785cc1c6e71e44 234 TIGRFAM TIGR00044 TIGR00044: pyridoxal phosphate enzyme, YggS family 1 229 3.7E-100 T 28-03-2018 IPR011078 Pyridoxal phosphate homeostasis protein CI104_RS05420 8d2a69e475c94356f2ba05362406aae0 274 Pfam PF05708 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family 65 156 5.9E-7 T 28-03-2018 IPR024453 Permuted papain-like amidase enzyme, YaeF/YiiX, C92 family CI104_RS05420 8d2a69e475c94356f2ba05362406aae0 274 SUPERFAMILY SSF54001 64 160 1.7E-25 T 28-03-2018 CI104_RS05420 8d2a69e475c94356f2ba05362406aae0 274 SUPERFAMILY SSF54001 201 263 1.7E-25 T 28-03-2018 CI104_RS05420 8d2a69e475c94356f2ba05362406aae0 274 Gene3D G3DSA:3.90.1720.10 61 257 4.4E-26 T 28-03-2018 CI104_RS11800 a8e0fc245e866e2b63eefbde16467e09 322 Pfam PF04952 Succinylglutamate desuccinylase / Aspartoacylase family 45 320 1.9E-67 T 28-03-2018 IPR007036 Succinylglutamate desuccinylase/aspartoacylase GO:0008152|GO:0016788 CI104_RS11800 a8e0fc245e866e2b63eefbde16467e09 322 TIGRFAM TIGR03242 arg_catab_astE: succinylglutamate desuccinylase 3 318 1.6E-130 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CI104_RS11800 a8e0fc245e866e2b63eefbde16467e09 322 Hamap MF_00767 Succinylglutamate desuccinylase [astE]. 1 322 146.344 T 28-03-2018 IPR016681 Succinylglutamate desuccinylase GO:0008270|GO:0009017|GO:0019544|GO:0019545 KEGG: 00330+3.5.1.96 CI104_RS11800 a8e0fc245e866e2b63eefbde16467e09 322 Gene3D G3DSA:3.40.630.10 40 296 2.1E-31 T 28-03-2018 CI104_RS11800 a8e0fc245e866e2b63eefbde16467e09 322 SUPERFAMILY SSF53187 1 319 3.64E-83 T 28-03-2018 CI104_RS23075 c9356ed71c991dd8d29ed96d1b2bf4e6 259 SUPERFAMILY SSF161098 62 253 1.44E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS23075 c9356ed71c991dd8d29ed96d1b2bf4e6 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 88 258 7.3E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS23075 c9356ed71c991dd8d29ed96d1b2bf4e6 259 TIGRFAM TIGR01097 PhnE: phosphonate ABC transporter, permease protein PhnE 16 258 9.1E-93 T 28-03-2018 IPR005769 ABC transporter, permease PhnE/PtxC GO:0005887|GO:0015604|GO:0015716 CI104_RS23075 c9356ed71c991dd8d29ed96d1b2bf4e6 259 Gene3D G3DSA:1.10.3720.10 12 259 1.6E-31 T 28-03-2018 CI104_RS24075 1d6f267c9a1fd381db5bb5064cff93e8 474 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 24 467 2.5E-81 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS24075 1d6f267c9a1fd381db5bb5064cff93e8 474 SUPERFAMILY SSF103473 26 460 3.01E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS24075 1d6f267c9a1fd381db5bb5064cff93e8 474 Pfam PF13347 MFS/sugar transport protein 26 456 3.7E-78 T 28-03-2018 CI104_RS24075 1d6f267c9a1fd381db5bb5064cff93e8 474 Gene3D G3DSA:1.20.1250.20 22 237 1.3E-10 T 28-03-2018 CI104_RS24075 1d6f267c9a1fd381db5bb5064cff93e8 474 Gene3D G3DSA:1.20.1250.20 241 466 3.3E-24 T 28-03-2018 CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 Hamap MF_00399 Thiol:disulfide interchange protein DsbD [dsbD]. 1 567 40.057 T 28-03-2018 IPR022910 Thiol:disulphide interchange protein DsbD GO:0047134|GO:0055114 CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 Gene3D G3DSA:3.40.30.10 441 567 3.5E-18 T 28-03-2018 CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 SUPERFAMILY SSF74863 27 141 1.7E-40 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 Pfam PF13899 Thioredoxin-like 465 540 1.2E-13 T 28-03-2018 CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 SUPERFAMILY SSF52833 449 564 4.03E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 ProSitePatterns PS00194 Thioredoxin family active site. 475 493 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 Gene3D G3DSA:2.60.40.1250 20 144 1.0E-38 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 Pfam PF11412 Disulphide bond corrector protein DsbC 29 137 2.0E-33 T 28-03-2018 IPR028250 Thiol:disulfide interchange protein DsbD, N-terminal domain CI104_RS22720 997f730663e10c76ff02c034ea19d97b 568 Pfam PF02683 Cytochrome C biogenesis protein transmembrane region 175 380 5.5E-19 T 28-03-2018 IPR003834 Cytochrome C biogenesis protein, transmembrane domain GO:0016020|GO:0017004|GO:0055114 CI104_RS00140 617963c0cc4a8efc8fd4e36017982d9b 394 TIGRFAM TIGR00880 2_A_01_02: multidrug resistance protein 51 186 5.7E-40 T 28-03-2018 IPR004734 Multidrug resistance protein GO:0015238|GO:0015893|GO:0016021 Reactome: R-HSA-442660 CI104_RS00140 617963c0cc4a8efc8fd4e36017982d9b 394 Pfam PF07690 Major Facilitator Superfamily 14 349 5.8E-39 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00140 617963c0cc4a8efc8fd4e36017982d9b 394 Gene3D G3DSA:1.20.1250.20 1 194 1.2E-31 T 28-03-2018 CI104_RS00140 617963c0cc4a8efc8fd4e36017982d9b 394 SUPERFAMILY SSF103473 5 384 1.83E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00140 617963c0cc4a8efc8fd4e36017982d9b 394 Gene3D G3DSA:1.20.1250.20 195 390 3.3E-7 T 28-03-2018 CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 SUPERFAMILY SSF46894 136 234 7.65E-22 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 Gene3D G3DSA:3.40.50.2300 1 136 9.9E-32 T 28-03-2018 CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 Pfam PF00072 Response regulator receiver domain 6 113 8.5E-27 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 SMART SM00862 156 232 3.7E-15 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 Gene3D G3DSA:1.10.10.10 137 238 1.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 SMART SM00448 4 114 6.3E-38 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 SUPERFAMILY SSF52172 2 126 2.85E-36 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS04445 c309dbeeec353a760a85ac406ec782f5 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 156 232 2.5E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 SUPERFAMILY SSF53335 4 273 4.84E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 Gene3D G3DSA:1.10.8.10 1 84 5.5E-22 T 28-03-2018 CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 180 186 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 Hamap MF_02126 Release factor glutamine methyltransferase [prmC]. 3 275 46.062 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 TIGRFAM TIGR03534 RF_mod_PrmC: protein-(glutamine-N5) methyltransferase, release factor-specific 23 271 1.1E-88 T 28-03-2018 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific GO:0008168 CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 Pfam PF13847 Methyltransferase domain 109 262 5.2E-20 T 28-03-2018 IPR025714 Methyltransferase domain CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 1 274 5.5E-97 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CI104_RS14430 62b715bdcf3a67f5853413c8f3f9d291 277 Gene3D G3DSA:3.40.50.150 85 276 4.9E-47 T 28-03-2018 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 Pfam PF08502 LeuA allosteric (dimerisation) domain 369 499 5.6E-36 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 Hamap MF_01025 2-isopropylmalate synthase [leuA]. 2 509 42.336 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 SUPERFAMILY SSF51569 1 290 1.43E-96 T 28-03-2018 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 TIGRFAM TIGR00973 leuA_bact: 2-isopropylmalate synthase 4 497 1.7E-256 T 28-03-2018 IPR005671 2-isopropylmalate synthase, bacterial-type GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 ProSitePatterns PS00816 Alpha-isopropylmalate and homocitrate synthases signature 2. 199 212 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 Pfam PF00682 HMGL-like 4 273 9.4E-105 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 Gene3D G3DSA:3.20.20.70 1 330 1.5E-106 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 ProSitePatterns PS00815 Alpha-isopropylmalate and homocitrate synthases signature 1. 12 28 - T 28-03-2018 IPR002034 Alpha-isopropylmalate/homocitrate synthase, conserved site GO:0019752|GO:0046912 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 SMART SM00917 369 500 1.1E-36 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS04830 da901cd513252153a374bc857864b8e2 523 SUPERFAMILY SSF110921 391 499 8.11E-26 T 28-03-2018 IPR013709 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain GO:0003852|GO:0009098 KEGG: 00290+2.3.3.13|KEGG: 00620+2.3.3.13|MetaCyc: PWY-6871 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 185 8.3E-64 T 28-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 Gene3D G3DSA:1.10.150.240 18 76 4.8E-11 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 147 167 2.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 2.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 5 16 2.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 174 187 2.6E-8 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 121 183 1.0E-15 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 SUPERFAMILY SSF56784 5 186 1.23E-45 T 28-03-2018 IPR023214 HAD-like domain CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 Gene3D G3DSA:3.40.50.1000 77 187 6.7E-23 T 28-03-2018 IPR023214 HAD-like domain CI104_RS19650 c80cd3b8bba48560b75f62b3d234cb11 188 Pfam PF13419 Haloacid dehalogenase-like hydrolase 8 183 9.6E-27 T 28-03-2018 IPR023214 HAD-like domain CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 ProDom PD004282 TRANSFERASE SYNTHASE HOLO-ACYL-CARRIER-PROTEIN HOLO-ACP 4'-PHOSPHOPANTETHEINYL FATTY ACID METAL-BINDING MAGNESIUM LIPID 9 87 6.0E-39 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 TIGRFAM TIGR00556 pantethn_trn: phosphopantetheine--protein transferase domain 3 126 2.1E-38 T 28-03-2018 IPR004568 Phosphopantetheine-protein transferase domain GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 TIGRFAM TIGR00516 acpS: holo-[acyl-carrier-protein] synthase 2 126 4.4E-59 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 SUPERFAMILY SSF56214 3 125 9.03E-30 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 5 121 1.1E-23 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 Gene3D G3DSA:3.90.470.20 1 126 2.5E-36 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS18795 0ef5ff0e6ac598dd20c63ef243e8b040 126 Hamap MF_00101 Holo-[acyl-carrier-protein] synthase [acpS]. 4 126 26.508 T 28-03-2018 IPR002582 Holo-[acyl carrier protein] synthase GO:0000287|GO:0006633|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1 CI104_RS02665 d5b1ee8ab97a88e89826f083f8f7d3d7 239 Gene3D G3DSA:1.10.3810.10 46 236 1.1E-56 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS02665 d5b1ee8ab97a88e89826f083f8f7d3d7 239 Hamap MF_00766 Monofunctional biosynthetic peptidoglycan transglycosylase [mtgA]. 5 230 43.282 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CI104_RS02665 d5b1ee8ab97a88e89826f083f8f7d3d7 239 Pfam PF00912 Transglycosylase 58 224 9.8E-52 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS02665 d5b1ee8ab97a88e89826f083f8f7d3d7 239 TIGRFAM TIGR02070 mono_pep_trsgly: monofunctional biosynthetic peptidoglycan transglycosylase 10 228 2.6E-86 T 28-03-2018 IPR011812 Biosynthetic peptidoglycan transglycosylase GO:0009252|GO:0009274|GO:0016021|GO:0016763 CI104_RS02665 d5b1ee8ab97a88e89826f083f8f7d3d7 239 SUPERFAMILY SSF53955 51 228 2.81E-61 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 SUPERFAMILY SSF81338 2 228 1.44E-68 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 TIGRFAM TIGR00861 MIP: MIP family channel proteins 7 223 1.9E-64 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 PRINTS PR00783 Major intrinsic protein family signature 167 189 7.7E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 PRINTS PR00783 Major intrinsic protein family signature 43 67 7.7E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 PRINTS PR00783 Major intrinsic protein family signature 80 99 7.7E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 PRINTS PR00783 Major intrinsic protein family signature 206 226 7.7E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 PRINTS PR00783 Major intrinsic protein family signature 3 22 7.7E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 PRINTS PR00783 Major intrinsic protein family signature 137 155 7.7E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 ProSitePatterns PS00221 MIP family signature. 61 69 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 Pfam PF00230 Major intrinsic protein 2 223 2.3E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 Hamap MF_01146 Aquaporin Z [aqpZ]. 2 230 36.063 T 28-03-2018 IPR023743 Aquaporin Z GO:0006833|GO:0015250|GO:0016021|GO:0055085 CI104_RS08820 b240a13e2ba0e536498da40abb0bfb22 231 Gene3D G3DSA:1.20.1080.10 1 231 1.6E-72 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS16405 82f5a40322d9035e275143d7a72bb42d 391 PIRSF PIRSF000390 1 389 3.9E-122 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CI104_RS16405 82f5a40322d9035e275143d7a72bb42d 391 Gene3D G3DSA:3.40.640.10 11 242 1.5E-42 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS16405 82f5a40322d9035e275143d7a72bb42d 391 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 377 6.2E-97 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CI104_RS16405 82f5a40322d9035e275143d7a72bb42d 391 Gene3D G3DSA:3.90.1150.10 244 390 5.9E-32 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS16405 82f5a40322d9035e275143d7a72bb42d 391 SUPERFAMILY SSF53383 8 386 8.25E-106 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 Gene3D G3DSA:3.40.190.10 183 260 1.2E-7 T 28-03-2018 CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 Gene3D G3DSA:1.10.10.10 1 81 7.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 SUPERFAMILY SSF46785 6 88 3.23E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 Pfam PF03466 LysR substrate binding domain 89 285 1.6E-19 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 5.6E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 Gene3D G3DSA:3.40.190.10 82 182 1.1E-11 T 28-03-2018 CI104_RS20460 183c7d270971de77f00127fbf4aac334 291 SUPERFAMILY SSF53850 92 286 9.62E-25 T 28-03-2018 CI104_RS16020 92974e6a0a982460e5e4c049b19d159e 577 SUPERFAMILY SSF52540 22 352 2.76E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16020 92974e6a0a982460e5e4c049b19d159e 577 SUPERFAMILY SSF52540 400 555 2.76E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16020 92974e6a0a982460e5e4c049b19d159e 577 Gene3D G3DSA:3.40.50.300 236 565 1.0E-27 T 28-03-2018 CI104_RS16020 92974e6a0a982460e5e4c049b19d159e 577 Pfam PF13245 AAA domain 26 221 4.7E-14 T 28-03-2018 CI104_RS16020 92974e6a0a982460e5e4c049b19d159e 577 Pfam PF13361 UvrD-like helicase C-terminal domain 346 553 3.3E-7 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CI104_RS16020 92974e6a0a982460e5e4c049b19d159e 577 Gene3D G3DSA:3.40.50.300 10 231 1.9E-24 T 28-03-2018 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 SUPERFAMILY SSF55620 186 267 1.48E-10 T 28-03-2018 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 PIRSF PIRSF004750 6 282 1.7E-127 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 Gene3D G3DSA:3.30.1130.10 21 136 4.6E-39 T 28-03-2018 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 Pfam PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term 21 131 3.5E-48 T 28-03-2018 IPR029139 NADPH-dependent 7-cyano-7-deazaguanine reductase, N-terminal KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 Hamap MF_00817 NADPH-dependent 7-cyano-7-deazaguanine reductase [queF]. 1 282 166.689 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 Gene3D G3DSA:3.30.1130.10 144 282 5.3E-47 T 28-03-2018 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 TIGRFAM TIGR03138 QueF: queuine synthase 11 282 9.2E-127 T 28-03-2018 IPR016428 NADPH-dependent 7-cyano-7-deazaguanine reductase, QueF type 2 GO:0005737|GO:0008616|GO:0046857|GO:0055114 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CI104_RS20110 b0a67dc558fd5315cb52844bf80e52a6 282 Pfam PF14489 QueF-like protein 196 270 2.6E-27 T 28-03-2018 IPR029500 NADPH-dependent 7-cyano-7-deazaguanine reductase QueF GO:0008616|GO:0033739 KEGG: 00790+1.7.1.13|MetaCyc: PWY-6700 CI104_RS01000 a9db3f2106fe35d3f1aac3f6c999b3d0 300 SUPERFAMILY SSF161098 93 280 6.54E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01000 a9db3f2106fe35d3f1aac3f6c999b3d0 300 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 116 299 8.7E-30 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01000 a9db3f2106fe35d3f1aac3f6c999b3d0 300 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 17 69 7.0E-16 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CI104_RS01000 a9db3f2106fe35d3f1aac3f6c999b3d0 300 Gene3D G3DSA:1.10.3720.10 19 287 2.9E-47 T 28-03-2018 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 SUPERFAMILY SSF103515 479 775 5.75E-53 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 SUPERFAMILY SSF51126 15 443 5.02E-35 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 PRINTS PR01484 Pertactin virulence factor family signature 691 712 8.3E-10 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 PRINTS PR01484 Pertactin virulence factor family signature 755 775 8.3E-10 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 PRINTS PR01484 Pertactin virulence factor family signature 511 531 8.3E-10 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 PRINTS PR01484 Pertactin virulence factor family signature 662 685 8.3E-10 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 PRINTS PR01484 Pertactin virulence factor family signature 730 755 8.3E-10 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 SMART SM00869 511 764 2.5E-44 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 Pfam PF03212 Pertactin 314 433 4.3E-37 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 334 775 1.2E-102 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 Pfam PF03797 Autotransporter beta-domain 514 753 2.0E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 Gene3D G3DSA:2.40.128.130 477 775 4.7E-42 T 28-03-2018 CI104_RS09660 97f34aa35b07af34dc2f497002e6b8db 775 Gene3D G3DSA:2.160.20.20 2 438 8.0E-33 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS02710 881e22ac3ae71ff07f886841b2f907fa 191 TIGRFAM TIGR04409 LptC_YrbK: LPS export ABC transporter periplasmic protein LptC 6 182 5.3E-53 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CI104_RS02710 881e22ac3ae71ff07f886841b2f907fa 191 Pfam PF06835 Lipopolysaccharide-assembly, LptC-related 10 183 4.6E-54 T 28-03-2018 IPR010664 Lipopolysaccharide assembly, LptC-related CI104_RS02710 881e22ac3ae71ff07f886841b2f907fa 191 PIRSF PIRSF028513 1 186 8.7E-41 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CI104_RS02710 881e22ac3ae71ff07f886841b2f907fa 191 Gene3D G3DSA:2.60.450.10 25 151 6.3E-6 T 28-03-2018 CI104_RS02710 881e22ac3ae71ff07f886841b2f907fa 191 Hamap MF_01915 Lipopolysaccharide export system protein LptC [lptC]. 4 185 27.638 T 28-03-2018 IPR026265 Lipopolysaccharide export system protein LptC GO:0005887|GO:0015221|GO:0015920 CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 1 236 2.3E-107 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 Gene3D G3DSA:3.30.70.980 178 247 8.5E-13 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 3 238 36.698 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 Gene3D G3DSA:3.30.70.980 83 177 3.2E-32 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 Gene3D G3DSA:1.10.10.200 1 78 5.9E-30 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 SUPERFAMILY SSF75625 3 244 1.06E-97 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS15375 66bc0b0a32cddb9bdd293c9586b281d9 247 Pfam PF01709 Transcriptional regulator 5 235 3.0E-95 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS27725 b33cf907963245a37b88e119695b92ad 215 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 4 202 8.9E-69 T 28-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CI104_RS27725 b33cf907963245a37b88e119695b92ad 215 Pfam PF12477 Sex factor F TraW protein N terminal 3 30 1.3E-6 T 28-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain CI104_RS03850 98f494944d3c3aeed34dba15c9e98993 193 SUPERFAMILY SSF53474 3 188 6.95E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS03850 98f494944d3c3aeed34dba15c9e98993 193 Gene3D G3DSA:3.40.50.1820 2 192 6.0E-19 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS03850 98f494944d3c3aeed34dba15c9e98993 193 Pfam PF05728 Uncharacterised protein family (UPF0227) 4 188 4.8E-70 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CI104_RS02100 acff94fd340d693184854d154eb30075 104 ProSitePatterns PS01108 Ribosomal protein L24 signature. 8 25 - T 28-03-2018 IPR005825 Ribosomal protein L24/L26, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02100 acff94fd340d693184854d154eb30075 104 Gene3D G3DSA:2.30.30.30 2 93 2.2E-30 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CI104_RS02100 acff94fd340d693184854d154eb30075 104 Pfam PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 39 103 4.4E-23 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02100 acff94fd340d693184854d154eb30075 104 SUPERFAMILY SSF50104 4 100 4.69E-33 T 28-03-2018 IPR008991 Translation protein SH3-like domain CI104_RS02100 acff94fd340d693184854d154eb30075 104 TIGRFAM TIGR01079 rplX_bact: ribosomal protein uL24 3 103 8.1E-40 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02100 acff94fd340d693184854d154eb30075 104 Pfam PF00467 KOW motif 8 37 7.7E-5 T 28-03-2018 IPR005824 KOW CI104_RS02100 acff94fd340d693184854d154eb30075 104 Hamap MF_01326_B 50S ribosomal protein L24 [rplX]. 3 97 20.168 T 28-03-2018 IPR003256 Ribosomal protein L24 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02100 acff94fd340d693184854d154eb30075 104 SMART SM00739 4 31 9.8E-4 T 28-03-2018 IPR005824 KOW CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 SMART SM00855 3 157 4.5E-24 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 SUPERFAMILY SSF53254 1 208 2.23E-58 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 Hamap MF_01040 Probable phosphoglycerate mutase GpmB [gpmB]. 1 215 61.608 T 28-03-2018 IPR023086 Phosphoglycerate mutase, GpmB, probable GO:0004619|GO:0006096 CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 PIRSF PIRSF000709 2 169 8.8E-9 T 28-03-2018 CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 4 192 3.4E-57 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 6 15 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CI104_RS04415 d8f5b20a4ff8906d9fdd5472739cf42b 215 Gene3D G3DSA:3.40.50.1240 1 213 3.4E-54 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS18965 325353c7fdb51c672df0d18fd19611a9 112 SUPERFAMILY SSF69754 3 109 1.24E-33 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS18965 325353c7fdb51c672df0d18fd19611a9 112 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 4 91 4.5E-22 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS18965 325353c7fdb51c672df0d18fd19611a9 112 Gene3D G3DSA:3.30.160.100 2 92 2.6E-27 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS18965 325353c7fdb51c672df0d18fd19611a9 112 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 97 4.8E-35 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS07960 0a07139ad9ba3e970d39f339b5e818fe 214 SUPERFAMILY SSF53639 1 208 1.9E-63 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS07960 0a07139ad9ba3e970d39f339b5e818fe 214 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 12 190 2.0E-46 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS07960 0a07139ad9ba3e970d39f339b5e818fe 214 Gene3D G3DSA:3.40.225.10 5 204 1.3E-54 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS07960 0a07139ad9ba3e970d39f339b5e818fe 214 SMART SM01007 11 190 1.4E-57 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 3.1E-30 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 SUPERFAMILY SSF54862 1 503 7.85E-183 T 28-03-2018 CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 Pfam PF13247 4Fe-4S dicluster domain 175 271 4.7E-37 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 Gene3D G3DSA:3.30.70.20 5 197 2.6E-28 T 28-03-2018 CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 493 5.8E-298 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 Gene3D G3DSA:3.30.70.20 198 236 9.4E-20 T 28-03-2018 CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 Gene3D G3DSA:3.30.70.20 237 363 4.1E-31 T 28-03-2018 CI104_RS13230 ba65a232c175197d35ca958bf5fc9b03 514 Gene3D G3DSA:3.30.70.20 364 467 2.1E-30 T 28-03-2018 CI104_RS17645 e05eb357f7e6fea56015a8b9e95d4957 214 SUPERFAMILY SSF47616 91 206 1.15E-8 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS17645 e05eb357f7e6fea56015a8b9e95d4957 214 Pfam PF14834 Glutathione S-transferase, C-terminal domain 95 211 1.3E-66 T 28-03-2018 IPR034338 Glutathione S-transferases, subfamily 4, C-terminal KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CI104_RS17645 e05eb357f7e6fea56015a8b9e95d4957 214 Pfam PF02798 Glutathione S-transferase, N-terminal domain 13 80 3.6E-11 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS17645 e05eb357f7e6fea56015a8b9e95d4957 214 Gene3D G3DSA:1.20.1050.10 105 203 1.6E-12 T 28-03-2018 CI104_RS17645 e05eb357f7e6fea56015a8b9e95d4957 214 SUPERFAMILY SSF52833 14 87 3.45E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS17645 e05eb357f7e6fea56015a8b9e95d4957 214 Gene3D G3DSA:3.40.30.10 1 104 2.6E-23 T 28-03-2018 CI104_RS08430 0f322c70cde1633a60b7b7487cd33055 88 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 39 63 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CI104_RS08430 0f322c70cde1633a60b7b7487cd33055 88 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 37 67 1.5E-14 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CI104_RS08430 0f322c70cde1633a60b7b7487cd33055 88 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 9 67 3.7E-18 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type CI104_RS08430 0f322c70cde1633a60b7b7487cd33055 88 PRINTS PR00618 DksA/TraR zinc finger signature 39 50 5.5E-6 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CI104_RS08430 0f322c70cde1633a60b7b7487cd33055 88 PRINTS PR00618 DksA/TraR zinc finger signature 51 63 5.5E-6 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CI104_RS08430 0f322c70cde1633a60b7b7487cd33055 88 SUPERFAMILY SSF57716 39 73 1.43E-8 T 28-03-2018 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 SUPERFAMILY SSF51306 78 323 8.2E-84 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 Gene3D G3DSA:2.10.109.10 76 320 1.7E-56 T 28-03-2018 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 ProSitePatterns PS00760 Signal peptidases I lysine active site. 146 158 - T 28-03-2018 IPR019757 Peptidase S26A, signal peptidase I, lysine active site GO:0008236|GO:0016021 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 Pfam PF00717 Peptidase S24-like 86 159 1.5E-20 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 ProSitePatterns PS00501 Signal peptidases I serine active site. 89 96 - T 28-03-2018 IPR019756 Peptidase S26A, signal peptidase I, serine active site GO:0008236|GO:0016021 Reactome: R-HSA-1799339|Reactome: R-HSA-381771|Reactome: R-HSA-400511|Reactome: R-HSA-422085 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 144 156 2.9E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 80 96 2.9E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 PRINTS PR00727 Bacterial leader peptidase 1 (S26A) family signature 264 283 2.9E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 Pfam PF10502 Signal peptidase, peptidase S26 254 302 1.9E-7 T 28-03-2018 IPR019533 Peptidase S26 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 260 305 5.4E-17 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 66 159 5.1E-25 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CI104_RS18825 ef36deb65802cbbf972de5788b627086 324 ProSitePatterns PS00761 Signal peptidases I signature 3. 269 282 - T 28-03-2018 IPR019758 Peptidase S26A, signal peptidase I, conserved site GO:0008236|GO:0016021 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 TIGRFAM TIGR01416 Rieske_proteo: ubiquinol-cytochrome c reductase, iron-sulfur subunit 14 178 9.4E-44 T 28-03-2018 IPR006317 Ubiquinol-cytochrome c reductase, iron-sulphur subunit GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 SUPERFAMILY SSF50022 36 176 1.31E-30 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 Pfam PF00355 Rieske [2Fe-2S] domain 112 164 3.2E-11 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 Pfam PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal 10 45 1.2E-6 T 28-03-2018 IPR019470 Ubiquitinol-cytochrome C reductase, Fe-S subunit, TAT signal GO:0008121|GO:0055114 KEGG: 00190+1.10.2.2|MetaCyc: PWY-3781|MetaCyc: PWY-6692|MetaCyc: PWY-7082|MetaCyc: PWY-7279 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 Gene3D G3DSA:2.102.10.10 51 179 5.9E-29 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 138 150 7.0E-12 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 150 162 7.0E-12 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 PRINTS PR00162 Rieske 2Fe-2S subunit signature 117 128 7.0E-12 T 28-03-2018 IPR005805 Rieske iron-sulphur protein, C-terminal GO:0016020|GO:0055114 CI104_RS14495 a632af0acf9e6a1e04b1f2c4bd8ebc47 183 Gene3D G3DSA:1.20.5.510 9 44 4.1E-8 T 28-03-2018 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 Pfam PF02378 Phosphotransferase system, EIIC 19 361 1.7E-86 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 70 372 3.9E-96 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 464 481 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 TIGRFAM TIGR02004 PTS-IIBC-malX: PTS system, maltose and glucose-specific IIBC component 8 525 7.8E-256 T 28-03-2018 IPR011301 PTS system, maltose/glucose-specific IIBC component GO:0008982|GO:0009401 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.208|MetaCyc: PWY-6619 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 Gene3D G3DSA:3.30.1360.60 451 525 2.2E-26 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 SUPERFAMILY SSF55604 454 526 7.19E-21 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 511 6.5E-27 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS12555 702194a08e9015e49ed305655ba7c1ca 530 Pfam PF00367 phosphotransferase system, EIIB 455 486 1.5E-15 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 11 69 2.4E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 Gene3D G3DSA:3.40.190.10 100 184 4.9E-10 T 28-03-2018 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 Gene3D G3DSA:3.40.190.10 185 273 1.4E-12 T 28-03-2018 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 SUPERFAMILY SSF46785 9 94 3.74E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 Gene3D G3DSA:1.10.10.10 2 94 6.7E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 26 37 8.0E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 47 58 8.0E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 37 47 8.0E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 SUPERFAMILY SSF53850 100 292 3.26E-16 T 28-03-2018 CI104_RS24045 42653e3a003b2f354b31f8f15b249959 297 Pfam PF03466 LysR substrate binding domain 100 283 8.6E-16 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS12070 e4f389100f719c990d2d0c5f52098cb8 414 Gene3D G3DSA:1.20.1250.20 200 391 7.4E-14 T 28-03-2018 CI104_RS12070 e4f389100f719c990d2d0c5f52098cb8 414 SUPERFAMILY SSF103473 7 392 7.59E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12070 e4f389100f719c990d2d0c5f52098cb8 414 Gene3D G3DSA:1.20.1250.20 5 199 2.4E-23 T 28-03-2018 CI104_RS12070 e4f389100f719c990d2d0c5f52098cb8 414 Pfam PF07690 Major Facilitator Superfamily 19 356 3.7E-30 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Gene3D G3DSA:3.30.930.10 223 531 1.2E-120 T 28-03-2018 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 SUPERFAMILY SSF52954 530 636 6.19E-34 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 SUPERFAMILY SSF81271 3 61 2.29E-16 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Gene3D G3DSA:3.40.50.800 532 642 1.2E-29 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 TIGRFAM TIGR00418 thrS: threonine--tRNA ligase 72 631 7.0E-247 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Pfam PF02824 TGS domain 4 61 4.5E-13 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 SUPERFAMILY SSF55186 63 241 4.06E-65 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Gene3D G3DSA:3.30.980.10 146 222 4.1E-17 T 28-03-2018 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Gene3D G3DSA:3.30.980.10 65 145 1.5E-22 T 28-03-2018 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Pfam PF03129 Anticodon binding domain 541 630 1.3E-23 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 329 357 8.1E-55 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 362 385 8.1E-55 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 507 520 8.1E-55 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 534 546 8.1E-55 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 PRINTS PR01047 Threonyl-tRNA synthetase signature 464 492 8.1E-55 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 318 528 4.8E-51 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Gene3D G3DSA:3.10.20.30 1 64 5.3E-20 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Hamap MF_00184 Threonine--tRNA ligase [thrS]. 66 634 34.176 T 28-03-2018 IPR002320 Threonine-tRNA ligase, class IIa GO:0004829|GO:0005524|GO:0005737|GO:0006435 KEGG: 00970+6.1.1.3 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 SUPERFAMILY SSF55681 243 525 5.81E-97 T 28-03-2018 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 SMART SM00863 170 219 2.6E-19 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CI104_RS11935 2344bafdb18133b9681ee4e80961f555 642 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 172 219 4.1E-14 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CI104_RS11050 502dcf909b44d0a2a258d6982ece20e5 65 Pfam PF14549 DNA-binding transcriptional regulator Cro 2 59 5.8E-22 T 28-03-2018 CI104_RS11050 502dcf909b44d0a2a258d6982ece20e5 65 SUPERFAMILY SSF47413 1 58 1.57E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS11050 502dcf909b44d0a2a258d6982ece20e5 65 Gene3D G3DSA:1.10.260.40 1 61 6.8E-18 T 28-03-2018 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 PIRSF PIRSF000478 1 439 4.8E-152 T 28-03-2018 IPR000053 Thymidine/pyrimidine-nucleoside phosphorylase GO:0004645|GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Pfam PF02885 Glycosyl transferase family, helical bundle domain 6 67 5.2E-19 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Gene3D G3DSA:3.90.1170.30 343 429 1.8E-28 T 28-03-2018 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Pfam PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain 350 422 4.3E-24 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 SUPERFAMILY SSF52418 74 334 2.75E-88 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Hamap MF_01628 Thymidine phosphorylase [deoA]. 2 438 47.048 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 SUPERFAMILY SSF54680 337 439 6.67E-32 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 SMART SM00941 350 424 2.5E-28 T 28-03-2018 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal GO:0006213|GO:0016763 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 ProSitePatterns PS00647 Thymidine and pyrimidine-nucleoside phosphorylases signature. 113 128 - T 28-03-2018 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site GO:0006206 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 TIGRFAM TIGR02643 T_phosphoryl: thymidine phosphorylase 2 438 1.0E-234 T 28-03-2018 IPR013465 Thymidine phosphorylase GO:0006213|GO:0009032 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Gene3D G3DSA:1.20.970.10 2 68 1.2E-21 T 28-03-2018 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 TIGRFAM TIGR02644 Y_phosphoryl: pyrimidine-nucleoside phosphorylase 5 423 2.5E-168 T 28-03-2018 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic GO:0006213|GO:0016154 KEGG: 00240+2.4.2.4|KEGG: 00983+2.4.2.4|MetaCyc: PWY-7181|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Pfam PF00591 Glycosyl transferase family, a/b domain 79 309 1.0E-52 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 SUPERFAMILY SSF47648 3 70 1.26E-21 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21175 a07fa90b3557f9ff420ba8a5f6638759 440 Gene3D G3DSA:3.40.1030.10 69 342 9.0E-82 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS17935 393f208a8142730c7a0704b608ed837c 80 ProDom PD857460 MEMBRANE YFDY INNER TRANSMEMBRANE STY2638 ECS3257 1 80 3.0E-24 T 28-03-2018 IPR024470 Protein of unknown function DUF2545 CI104_RS17935 393f208a8142730c7a0704b608ed837c 80 Pfam PF10810 Protein of unknown function (DUF2545) 1 80 1.3E-34 T 28-03-2018 IPR024470 Protein of unknown function DUF2545 CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 SMART SM00825 Beta-ketoacyl synthase 45 388 1.9E-10 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 236 337 1.6E-28 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 147 163 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 Gene3D G3DSA:3.40.47.10 1 234 8.0E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 Gene3D G3DSA:3.40.47.10 240 389 5.7E-41 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 93 229 2.4E-22 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 SUPERFAMILY SSF53901 203 387 1.43E-48 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01275 2b16f7ef7933555244d03f6d3f92172e 389 SUPERFAMILY SSF53901 2 230 3.17E-39 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS04290 aba852adf31813a9d392c9c34f94ff7d 425 Gene3D G3DSA:3.40.50.720 153 343 1.0E-16 T 28-03-2018 CI104_RS04290 aba852adf31813a9d392c9c34f94ff7d 425 SUPERFAMILY SSF51735 159 336 1.1E-19 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04290 aba852adf31813a9d392c9c34f94ff7d 425 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 97 1.2E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS04290 aba852adf31813a9d392c9c34f94ff7d 425 Gene3D G3DSA:3.90.180.10 1 152 1.4E-18 T 28-03-2018 CI104_RS04290 aba852adf31813a9d392c9c34f94ff7d 425 SUPERFAMILY SSF50129 3 188 7.32E-24 T 28-03-2018 IPR011032 GroES-like CI104_RS04290 aba852adf31813a9d392c9c34f94ff7d 425 Pfam PF00107 Zinc-binding dehydrogenase 186 329 3.0E-20 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS04140 cc7a07c5cc17f78cfd501824080eeb3f 91 PIRSF PIRSF029827 1 90 2.2E-44 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CI104_RS04140 cc7a07c5cc17f78cfd501824080eeb3f 91 SUPERFAMILY SSF111148 1 90 2.62E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CI104_RS04140 cc7a07c5cc17f78cfd501824080eeb3f 91 ProDom PD029191 TRAFFICKING IRON PROBABLE FE2 YGGX FEII 3D-STRUCTURE OXIDATIVE CONTROL DIRECT 1 76 2.0E-38 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CI104_RS04140 cc7a07c5cc17f78cfd501824080eeb3f 91 Pfam PF04362 Bacterial Fe(2+) trafficking 1 87 6.0E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CI104_RS04140 cc7a07c5cc17f78cfd501824080eeb3f 91 Hamap MF_00686 Probable Fe(2+)-trafficking protein [yggX]. 1 88 27.741 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CI104_RS04140 cc7a07c5cc17f78cfd501824080eeb3f 91 Gene3D G3DSA:1.10.3880.10 2 89 2.5E-40 T 28-03-2018 IPR007457 Fe(II) trafficking protein YggX GO:0005506 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 Gene3D G3DSA:1.20.140.10 218 383 2.6E-53 T 28-03-2018 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 228 376 3.1E-45 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 121 216 7.3E-22 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 SUPERFAMILY SSF47203 226 381 6.6E-50 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 Gene3D G3DSA:2.40.110.10 120 217 3.5E-28 T 28-03-2018 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 107 8.7E-17 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 PIRSF PIRSF016578 134 191 2.3 T 28-03-2018 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 PIRSF PIRSF016578 235 381 4.2E-10 T 28-03-2018 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 PIRSF PIRSF016578 10 95 0.0049 T 28-03-2018 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 SUPERFAMILY SSF56645 1 228 3.53E-51 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 335 354 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CI104_RS12050 d8dcac6c96605edb5c149a65364a1263 383 Gene3D G3DSA:1.10.540.10 1 115 1.3E-19 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CI104_RS00985 978dd86c27bb999f3afd5450232c882a 535 PIRSF PIRSF002741 21 535 4.2E-122 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS00985 978dd86c27bb999f3afd5450232c882a 535 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 73 453 9.2E-109 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS00985 978dd86c27bb999f3afd5450232c882a 535 Gene3D G3DSA:3.90.76.10 38 203 1.1E-39 T 28-03-2018 CI104_RS00985 978dd86c27bb999f3afd5450232c882a 535 Gene3D G3DSA:3.40.190.10 204 299 9.0E-30 T 28-03-2018 CI104_RS00985 978dd86c27bb999f3afd5450232c882a 535 SUPERFAMILY SSF53850 29 534 3.8E-163 T 28-03-2018 CI104_RS00985 978dd86c27bb999f3afd5450232c882a 535 Gene3D G3DSA:3.10.105.10 300 506 4.7E-66 T 28-03-2018 CI104_RS14155 c6c1cac45b6141112fe22d50de6ae4ad 81 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 2 81 9.5E-19 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS14155 c6c1cac45b6141112fe22d50de6ae4ad 81 Pfam PF03797 Autotransporter beta-domain 4 59 1.5E-6 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS14155 c6c1cac45b6141112fe22d50de6ae4ad 81 Gene3D G3DSA:2.40.128.130 2 81 5.2E-11 T 28-03-2018 CI104_RS14155 c6c1cac45b6141112fe22d50de6ae4ad 81 SUPERFAMILY SSF103515 5 81 5.75E-12 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 394 218.512 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 393 1.8E-221 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 7.6E-161 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 Gene3D G3DSA:3.20.20.150 1 391 2.7E-110 T 28-03-2018 CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 SUPERFAMILY SSF51658 1 133 5.56E-79 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 SUPERFAMILY SSF51658 163 383 5.56E-79 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS27300 df1a286be839059ce2e2aa6e53fb2a81 394 PIRSF PIRSF016049 1 393 1.6E-180 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:4.10.320.10 315 378 7.7E-20 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 397 627 4.0E-79 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:2.40.50.100 148 206 6.6E-9 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 228 257 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:2.40.50.100 263 314 3.8E-6 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 128 157 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 SUPERFAMILY SSF47005 318 363 3.92E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 SUPERFAMILY SSF51230 205 297 1.83E-23 T 28-03-2018 IPR011053 Single hybrid motif CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:2.40.50.100 207 262 7.4E-15 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 SUPERFAMILY SSF51230 1 94 2.09E-23 T 28-03-2018 IPR011053 Single hybrid motif CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Pfam PF02817 e3 binding domain 324 359 2.1E-15 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 TIGRFAM TIGR01348 PDHac_trf_long: dihydrolipoyllysine-residue acetyltransferase 196 628 4.3E-225 T 28-03-2018 IPR006256 Dihydrolipoamide acetyltransferase pyruvate dehydrogenase complex GO:0004742|GO:0006096|GO:0045254 KEGG: 00010+2.3.1.12|KEGG: 00020+2.3.1.12|KEGG: 00620+2.3.1.12 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 25 54 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:3.30.559.10 384 628 3.4E-79 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:3.90.1170.30 44 147 2.2E-23 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Gene3D G3DSA:3.90.1170.30 1 43 2.9E-9 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Pfam PF00364 Biotin-requiring enzyme 106 176 4.0E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Pfam PF00364 Biotin-requiring enzyme 207 276 5.8E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 Pfam PF00364 Biotin-requiring enzyme 4 73 8.1E-22 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 SUPERFAMILY SSF52777 386 627 4.45E-80 T 28-03-2018 CI104_RS05015 f80a04f8d7df8ed995e89d9749bb9237 628 SUPERFAMILY SSF51230 105 197 7.98E-24 T 28-03-2018 IPR011053 Single hybrid motif CI104_RS17855 27b13840636b965d15ca1b0e71a33556 313 Pfam PF01226 Formate/nitrite transporter 43 279 3.2E-39 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CI104_RS17855 27b13840636b965d15ca1b0e71a33556 313 Gene3D G3DSA:1.20.1080.10 34 295 4.2E-49 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 Pfam PF00196 Bacterial regulatory proteins, luxR family 835 890 1.5E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 SUPERFAMILY SSF46894 828 892 6.8E-17 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 SMART SM00421 833 890 5.3E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 Hamap MF_01247 HTH-type transcriptional regulator MalT [malT]. 1 899 39.883 T 28-03-2018 IPR023768 Transcriptional regulator HTH-type, MalT CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 ProSitePatterns PS00622 LuxR-type HTH domain signature. 850 877 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 Gene3D G3DSA:1.25.40.10 436 808 9.7E-47 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 SUPERFAMILY SSF48452 442 803 1.16E-154 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 836 850 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 850 866 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 866 878 1.2E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 Gene3D G3DSA:3.40.50.300 17 193 4.8E-5 T 28-03-2018 CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 SUPERFAMILY SSF52540 6 226 3.26E-7 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01650 eac87929f0f667d345c9e7c65db3d73c 901 Gene3D G3DSA:1.10.10.10 833 894 2.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 SUPERFAMILY SSF52374 151 269 1.16E-20 T 28-03-2018 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 SUPERFAMILY SSF52374 308 340 1.16E-20 T 28-03-2018 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 153 207 1.4E-10 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 SMART SM00764 150 338 2.6E-114 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 SUPERFAMILY SSF55729 40 112 3.21E-7 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 Gene3D G3DSA:3.40.50.620 143 343 1.0E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 Pfam PF08218 Citrate lyase ligase C-terminal domain 151 338 1.1E-76 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 11 345 1.8E-112 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 Gene3D G3DSA:3.40.630.30 4 142 1.3E-5 T 28-03-2018 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 PIRSF PIRSF005751 4 353 5.5E-120 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CI104_RS19410 f7ee38209a7ddddf59dfae62c193e14e 357 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 113 341 3.0E-68 T 28-03-2018 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 Hamap MF_00246 Galactokinase [galK]. 25 381 45.085 T 28-03-2018 IPR022963 Galactokinase, bacterial GO:0004335|GO:0006012 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 121 132 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 SUPERFAMILY SSF55060 205 380 5.44E-52 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 Pfam PF08544 GHMP kinases C terminal 279 361 1.9E-12 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 ProSitePatterns PS00106 Galactokinase signature. 27 38 - T 28-03-2018 IPR019741 Galactokinase, conserved site KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 Gene3D G3DSA:3.30.70.890 207 381 2.2E-57 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 TIGRFAM TIGR00131 gal_kin: galactokinase 5 382 3.0E-168 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 Gene3D G3DSA:3.30.230.10 2 206 7.5E-57 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 SUPERFAMILY SSF54211 3 203 2.13E-63 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PIRSF PIRSF000530 1 382 3.3E-123 T 28-03-2018 IPR006206 Mevalonate/galactokinase GO:0005524|GO:0005737|GO:0008152|GO:0016301|GO:0016773 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 Pfam PF00288 GHMP kinases N terminal domain 114 181 4.6E-14 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00959 Mevalonate kinase family signature 25 49 5.8E-46 T 28-03-2018 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00959 Mevalonate kinase family signature 119 141 5.8E-46 T 28-03-2018 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00959 Mevalonate kinase family signature 328 345 5.8E-46 T 28-03-2018 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00959 Mevalonate kinase family signature 162 181 5.8E-46 T 28-03-2018 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 Pfam PF10509 Galactokinase galactose-binding signature 10 57 1.8E-21 T 28-03-2018 IPR019539 Galactokinase galactose-binding domain GO:0005534 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00473 Galactokinase signature 27 45 4.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00473 Galactokinase signature 92 103 4.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00473 Galactokinase signature 112 130 4.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS08175 87cdacf9ce3db350c4ba3cdd5c72482f 382 PRINTS PR00473 Galactokinase signature 263 277 4.9E-30 T 28-03-2018 IPR000705 Galactokinase GO:0004335|GO:0005524|GO:0006012|GO:0046835 KEGG: 00052+2.7.1.6|KEGG: 00520+2.7.1.6|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6527 CI104_RS07160 79031395fa8c97b39621d7a8ce872a85 377 Pfam PF12706 Beta-lactamase superfamily domain 120 314 3.5E-42 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS07160 79031395fa8c97b39621d7a8ce872a85 377 SUPERFAMILY SSF56281 206 352 1.83E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS07160 79031395fa8c97b39621d7a8ce872a85 377 SUPERFAMILY SSF56281 104 179 1.83E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS07160 79031395fa8c97b39621d7a8ce872a85 377 SMART SM00849 108 314 0.0011 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS07160 79031395fa8c97b39621d7a8ce872a85 377 Gene3D G3DSA:3.60.15.10 81 368 5.5E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS07160 79031395fa8c97b39621d7a8ce872a85 377 PIRSF PIRSF038896 12 355 1.1E-86 T 28-03-2018 IPR024884 N-acyl-phosphatidylethanolamine-hydrolysing phospholipase D GO:0008270|GO:0070290 Reactome: R-HSA-2466712 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 Pfam PF04257 Exodeoxyribonuclease V, gamma subunit 1 806 0.0 T 28-03-2018 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 TIGRFAM TIGR01450 recC: exodeoxyribonuclease V, gamma subunit 2 1087 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 SUPERFAMILY SSF52980 820 1120 9.12E-96 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 SUPERFAMILY SSF52540 363 812 2.3E-108 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 SUPERFAMILY SSF52540 1 347 3.19E-129 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 Hamap MF_01486 RecBCD enzyme subunit RecC [recC]. 1 1122 21.13 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 Gene3D G3DSA:1.10.10.160 86 185 8.3E-32 T 28-03-2018 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 PIRSF PIRSF000980 1 1122 0.0 T 28-03-2018 IPR006697 RecBCD enzyme subunit RecC GO:0008854|GO:0009338 CI104_RS20325 4894b88958a88c4a8f427d3c36ce90e1 1122 Gene3D G3DSA:3.40.50.300 327 811 2.6E-71 T 28-03-2018 CI104_RS18175 95efbda9851d99be55365830962585f4 291 TIGRFAM TIGR02140 permease_CysW: sulfate ABC transporter, permease protein CysW 19 276 2.4E-111 T 28-03-2018 IPR011866 Sulphate ABC transporter, permease protein CysW GO:0008272|GO:0015116|GO:0016021 CI104_RS18175 95efbda9851d99be55365830962585f4 291 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 275 1.6E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS18175 95efbda9851d99be55365830962585f4 291 Gene3D G3DSA:1.10.3720.10 18 282 9.8E-40 T 28-03-2018 CI104_RS18175 95efbda9851d99be55365830962585f4 291 SUPERFAMILY SSF161098 16 268 9.68E-53 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS18175 95efbda9851d99be55365830962585f4 291 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 2 275 4.6E-114 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CI104_RS11765 076f75ac6136624205ec5d1ebb307ce5 387 Pfam PF13416 Bacterial extracellular solute-binding protein 61 350 1.7E-16 T 28-03-2018 CI104_RS11765 076f75ac6136624205ec5d1ebb307ce5 387 SUPERFAMILY SSF53850 31 384 1.2E-31 T 28-03-2018 CI104_RS11765 076f75ac6136624205ec5d1ebb307ce5 387 PIRSF PIRSF029172 1 387 6.9E-175 T 28-03-2018 IPR027020 Protein ynjB CI104_RS11765 076f75ac6136624205ec5d1ebb307ce5 387 Gene3D G3DSA:3.40.190.10 151 328 5.8E-13 T 28-03-2018 CI104_RS11765 076f75ac6136624205ec5d1ebb307ce5 387 Gene3D G3DSA:3.40.190.10 24 137 6.6E-5 T 28-03-2018 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 SUPERFAMILY SSF47384 265 344 1.31E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 SUPERFAMILY SSF55874 337 496 1.28E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 Gene3D G3DSA:1.10.287.130 271 339 1.9E-18 T 28-03-2018 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 Pfam PF00512 His Kinase A (phospho-acceptor) domain 281 343 1.4E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 389 497 5.5E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 SMART SM00388 280 347 6.1E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 Gene3D G3DSA:3.30.565.10 340 497 8.0E-36 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 483 496 3.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 425 439 3.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 460 478 3.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 PRINTS PR00344 Bacterial sensor protein C-terminal signature 443 453 3.7E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24410 d416d97afc895905779d3d08f89a80cb 498 SMART SM00387 388 498 5.4E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 SMART SM00342 180 262 7.5E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 Gene3D G3DSA:2.60.120.280 17 148 1.4E-14 T 28-03-2018 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 Gene3D G3DSA:1.10.10.60 149 220 1.2E-9 T 28-03-2018 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 Gene3D G3DSA:1.10.10.60 221 270 1.3E-8 T 28-03-2018 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 SUPERFAMILY SSF46689 217 264 2.02E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 Pfam PF02311 AraC-like ligand binding domain 30 147 1.5E-16 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 SUPERFAMILY SSF51215 24 138 2.62E-17 T 28-03-2018 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 SUPERFAMILY SSF46689 170 213 1.04E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 217 258 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS21520 7816456e5fe3329eeee4f72e072792ac 271 Pfam PF12833 Helix-turn-helix domain 186 263 1.6E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 Pfam PF01546 Peptidase family M20/M25/M40 76 377 6.9E-32 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 Hamap MF_01108 Acetylornithine deacetylase [argE]. 3 382 66.664 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 SUPERFAMILY SSF53187 305 381 2.8E-58 T 28-03-2018 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 SUPERFAMILY SSF53187 3 180 2.8E-58 T 28-03-2018 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 Pfam PF07687 Peptidase dimerisation domain 178 288 6.3E-23 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 TIGRFAM TIGR01892 AcOrn-deacetyl: acetylornithine deacetylase (ArgE) 10 377 3.1E-165 T 28-03-2018 IPR010169 Acetylornithine deacetylase ArgE GO:0005737|GO:0006526|GO:0008777 KEGG: 00220+3.5.1.16|MetaCyc: PWY-5154 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 Gene3D G3DSA:3.30.70.360 184 299 9.4E-21 T 28-03-2018 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 75 84 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 Gene3D G3DSA:3.40.630.10 1 183 1.4E-28 T 28-03-2018 CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 SUPERFAMILY SSF55031 181 294 5.53E-20 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS23970 7a3cb6f2680c1dfb74ed6666fe691c7e 383 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 110 147 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 SUPERFAMILY SSF52540 459 584 4.72E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 SUPERFAMILY SSF52540 37 82 4.72E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Pfam PF04851 Type III restriction enzyme, res subunit 13 119 2.2E-9 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Pfam PF00271 Helicase conserved C-terminal domain 435 544 9.5E-18 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Gene3D G3DSA:3.40.50.300 10 412 1.1E-33 T 28-03-2018 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 SMART SM00490 460 546 4.7E-20 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 SUPERFAMILY SSF52540 3 415 9.51E-139 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Gene3D G3DSA:3.40.50.300 415 589 1.0E-32 T 28-03-2018 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 666 0.0 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Pfam PF12344 Ultra-violet resistance protein B 552 593 3.1E-21 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 SMART SM00487 9 425 5.0E-28 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Gene3D G3DSA:4.10.860.10 612 673 1.5E-16 T 28-03-2018 IPR001943 UVR domain GO:0005515 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 SUPERFAMILY SSF46600 626 669 4.05E-12 T 28-03-2018 IPR001943 UVR domain GO:0005515 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Pfam PF02151 UvrB/uvrC motif 634 667 7.8E-7 T 28-03-2018 IPR001943 UVR domain GO:0005515 CI104_RS08295 2e3a6c373bccb169617bbdb5cb1bac19 673 Hamap MF_00204 UvrABC system protein B [uvrB]. 3 668 44.296 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 393 465 1.6E-12 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 289 369 2.1E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 SUPERFAMILY SSF50156 273 382 1.33E-22 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Gene3D G3DSA:2.30.42.10 286 390 2.4E-26 T 28-03-2018 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 PRINTS PR00834 HtrA/DegQ protease family signature 126 138 1.7E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 PRINTS PR00834 HtrA/DegQ protease family signature 245 262 1.7E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 PRINTS PR00834 HtrA/DegQ protease family signature 223 240 1.7E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 PRINTS PR00834 HtrA/DegQ protease family signature 188 212 1.7E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 PRINTS PR00834 HtrA/DegQ protease family signature 147 167 1.7E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 PRINTS PR00834 HtrA/DegQ protease family signature 331 343 1.7E-60 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Pfam PF13365 Trypsin-like peptidase domain 116 252 1.0E-32 T 28-03-2018 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Gene3D G3DSA:2.30.42.10 391 476 4.0E-17 T 28-03-2018 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 SUPERFAMILY SSF50494 113 300 7.78E-65 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 SUPERFAMILY SSF50494 18 59 7.78E-65 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 SMART SM00228 291 373 1.4E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 SMART SM00228 398 468 3.2E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 SUPERFAMILY SSF50156 401 472 1.3E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 40 474 2.8E-166 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Gene3D G3DSA:2.40.10.10 163 281 9.4E-44 T 28-03-2018 CI104_RS05255 d7c0615468f0197147cee4e6bac4b60e 476 Gene3D G3DSA:2.40.10.10 27 162 7.0E-32 T 28-03-2018 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 5.1E-67 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00183 E.coli/Salmonella-type porin signature 292 311 5.1E-67 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 5.1E-67 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00183 E.coli/Salmonella-type porin signature 257 274 5.1E-67 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 5.1E-67 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.1E-67 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 1.3E-14 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.3E-14 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 1.3E-14 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 251 263 1.3E-14 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 346 363 1.3E-14 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 346 362 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 SUPERFAMILY SSF56935 22 395 2.12E-77 T 28-03-2018 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 Gene3D G3DSA:2.40.160.10 31 395 9.2E-50 T 28-03-2018 CI104_RS15970 c485dfca6fce23eaf02040f1a3e68084 395 Pfam PF00267 Gram-negative porin 27 395 2.4E-153 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 SUPERFAMILY SSF51206 12 141 1.44E-20 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 SUPERFAMILY SSF46785 151 221 5.14E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 Pfam PF00027 Cyclic nucleotide-binding domain 35 119 2.3E-10 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 Pfam PF13545 Crp-like helix-turn-helix domain 158 220 3.4E-8 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 SMART SM00100 15 135 3.8E-4 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 Gene3D G3DSA:1.10.10.10 143 225 9.3E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05835 a24ae9a93e14aa2168d83e99b0b36922 226 Gene3D G3DSA:2.60.120.10 2 142 1.9E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 TIGRFAM TIGR00714 hscB: Fe-S protein assembly co-chaperone HscB 13 168 3.9E-65 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 SUPERFAMILY SSF46565 1 75 5.89E-17 T 28-03-2018 IPR001623 DnaJ domain CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 Hamap MF_00682 Co-chaperone protein HscB [hscB]. 1 169 24.552 T 28-03-2018 IPR004640 Co-chaperone Hsc20 GO:0001671|GO:0051087|GO:0097428 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 SUPERFAMILY SSF47144 77 170 1.44E-25 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 Gene3D G3DSA:1.20.1280.20 81 170 2.8E-24 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 Gene3D G3DSA:1.10.287.110 1 79 2.8E-9 T 28-03-2018 IPR001623 DnaJ domain CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 Pfam PF07743 HSCB C-terminal oligomerisation domain 88 160 1.5E-17 T 28-03-2018 IPR009073 Co-chaperone HscB, C-terminal oligomerisation domain GO:0051259 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS18605 dd84b6b43b179e3253221c508fedf8c4 171 SMART SM00271 1 66 3.4E-7 T 28-03-2018 IPR001623 DnaJ domain CI104_RS14115 3781326db20a5d3a547e6a20143180ed 348 Pfam PF08496 Peptidase family S49 N-terminal 2 157 4.6E-60 T 28-03-2018 IPR013703 Peptidase S49, N-terminal proteobacteria GO:0004252|GO:0005886 CI104_RS14115 3781326db20a5d3a547e6a20143180ed 348 Gene3D G3DSA:3.90.226.10 34 307 2.5E-30 T 28-03-2018 CI104_RS14115 3781326db20a5d3a547e6a20143180ed 348 SUPERFAMILY SSF52096 239 298 3.95E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS14115 3781326db20a5d3a547e6a20143180ed 348 SUPERFAMILY SSF52096 99 208 3.95E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS14115 3781326db20a5d3a547e6a20143180ed 348 Pfam PF01343 Peptidase family S49 160 309 4.9E-46 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CI104_RS13855 b9b899cd7009ee404aaa8f001c85a3de 537 Gene3D G3DSA:3.40.190.10 172 305 6.3E-31 T 28-03-2018 CI104_RS13855 b9b899cd7009ee404aaa8f001c85a3de 537 Gene3D G3DSA:3.90.76.10 59 171 2.5E-34 T 28-03-2018 CI104_RS13855 b9b899cd7009ee404aaa8f001c85a3de 537 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 453 1.3E-86 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS13855 b9b899cd7009ee404aaa8f001c85a3de 537 SUPERFAMILY SSF53850 32 526 3.11E-137 T 28-03-2018 CI104_RS13855 b9b899cd7009ee404aaa8f001c85a3de 537 PIRSF PIRSF002741 1 536 5.5E-109 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS13855 b9b899cd7009ee404aaa8f001c85a3de 537 Gene3D G3DSA:3.10.105.10 306 506 2.6E-58 T 28-03-2018 CI104_RS01905 a0ab402c8f8727643c3f19d749f34554 695 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 12 674 6.0E-248 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CI104_RS01905 a0ab402c8f8727643c3f19d749f34554 695 Pfam PF12805 FUSC-like inner membrane protein yccS 63 330 6.9E-70 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CI104_RS01905 a0ab402c8f8727643c3f19d749f34554 695 Pfam PF13515 Fusaric acid resistance protein-like 377 498 3.8E-20 T 28-03-2018 CI104_RS01230 2065b5b8acc75839b279b53e59873778 254 Gene3D G3DSA:3.40.50.300 1 246 6.9E-51 T 28-03-2018 CI104_RS01230 2065b5b8acc75839b279b53e59873778 254 SMART SM00382 28 218 5.8E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01230 2065b5b8acc75839b279b53e59873778 254 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01230 2065b5b8acc75839b279b53e59873778 254 Pfam PF00005 ABC transporter 20 168 2.4E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01230 2065b5b8acc75839b279b53e59873778 254 SUPERFAMILY SSF52540 5 241 1.54E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01230 2065b5b8acc75839b279b53e59873778 254 TIGRFAM TIGR02770 nickel_nikD: nickel import ATP-binding protein NikD 18 245 2.7E-103 T 28-03-2018 IPR014138 Nickel import ATP-binding protein NikD GO:0005886|GO:0015413|GO:0015675|GO:0016151 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 TIGRFAM TIGR01503 MthylAspMut_E: methylaspartate mutase, E subunit 3 481 1.5E-252 T 28-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 PIRSF PIRSF001495 1 481 6.0E-245 T 28-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 Pfam PF06368 Methylaspartate mutase E chain (MutE) 43 481 7.7E-216 T 28-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 Hamap MF_01923 Glutamate mutase epsilon subunit [glmE]. 2 481 54.759 T 28-03-2018 IPR006396 Glutamate mutase epsilon subunit GO:0019670|GO:0050097 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 Gene3D G3DSA:3.20.20.240 1 416 4.8E-112 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 SUPERFAMILY SSF51703 1 481 6.67E-199 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CI104_RS08020 1efd0d021e0eee6d5c4444f0518045cb 481 Gene3D G3DSA:3.90.970.10 417 481 1.7E-27 T 28-03-2018 IPR014714 Glutamate mutase E subunit, C-terminal domain GO:0016866|GO:0019670|GO:0031419 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 SUPERFAMILY SSF55681 4 255 2.41E-108 T 28-03-2018 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 TIGRFAM TIGR00344 alaS: alanine--tRNA ligase 7 854 0.0 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 306 319 1.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 236 249 1.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 282 298 1.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 76 87 1.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 PRINTS PR00980 Alanyl-tRNA synthetase signature 209 220 1.5E-33 T 28-03-2018 IPR002318 Alanine-tRNA ligase, class IIc GO:0000166|GO:0005737 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 Pfam PF01411 tRNA synthetases class II (A) 7 556 2.5E-241 T 28-03-2018 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal GO:0000166|GO:0004813|GO:0005524|GO:0006419 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 SUPERFAMILY SSF101353 256 465 6.15E-62 T 28-03-2018 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain GO:0000166|GO:0004813|GO:0005524|GO:0005737|GO:0006419 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 Pfam PF02272 DHHA1 domain 732 871 2.8E-32 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 SUPERFAMILY SSF50447 455 551 1.47E-20 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 SUPERFAMILY SSF55186 552 708 1.26E-51 T 28-03-2018 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain GO:0000166 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 Hamap MF_00036_B Alanine--tRNA ligase [alaS]. 1 875 209.826 T 28-03-2018 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria GO:0004813 KEGG: 00970+6.1.1.7 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 Gene3D G3DSA:3.30.930.10 2 252 2.2E-118 T 28-03-2018 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 SMART SM00863 653 696 7.6E-22 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 Pfam PF07973 Threonyl and Alanyl tRNA synthetase second additional domain 653 696 9.2E-18 T 28-03-2018 IPR012947 Threonyl/alanyl tRNA synthetase, SAD GO:0005524|GO:0016876|GO:0043039 CI104_RS19690 4616536b80e62a8b2fdee272fb41f966 875 Gene3D G3DSA:3.30.980.10 553 713 5.0E-47 T 28-03-2018 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 PRINTS PR00502 NUDIX hydrolase family signature 47 62 3.6E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 PRINTS PR00502 NUDIX hydrolase family signature 33 47 3.6E-8 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 Pfam PF00293 NUDIX domain 7 124 8.6E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 Gene3D G3DSA:3.90.79.10 1 129 5.4E-28 T 28-03-2018 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 SUPERFAMILY SSF55811 2 124 7.72E-32 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 TIGRFAM TIGR00586 mutt: mutator mutT protein 1 127 3.3E-60 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 PRINTS PR01401 Mutator MutT protein signature 2 23 5.8E-14 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 PRINTS PR01401 Mutator MutT protein signature 77 90 5.8E-14 T 28-03-2018 IPR003561 Mutator MutT GO:0006281|GO:0008413 MetaCyc: PWY-6502 CI104_RS04945 671832d6fc8c93a6d5f63a2d296626c5 132 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS20240 528e84e191f7295c8ffeb4fcfc8d2c64 366 Hamap MF_01551 Ribosomal RNA large subunit methyltransferase M [rlmM]. 1 355 85.493 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CI104_RS20240 528e84e191f7295c8ffeb4fcfc8d2c64 366 SUPERFAMILY SSF53335 184 296 1.33E-13 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS20240 528e84e191f7295c8ffeb4fcfc8d2c64 366 Gene3D G3DSA:3.40.50.150 176 357 8.8E-22 T 28-03-2018 CI104_RS20240 528e84e191f7295c8ffeb4fcfc8d2c64 366 Pfam PF01728 FtsJ-like methyltransferase 186 279 1.9E-8 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CI104_RS20240 528e84e191f7295c8ffeb4fcfc8d2c64 366 PIRSF PIRSF028774 1 360 8.7E-188 T 28-03-2018 IPR011224 Ribosomal RNA large subunit methyltransferase M GO:0008168 CI104_RS01930 6d646129b8c136ff62d8f8d975892fef 72 ProDom PD026997 UPF0270 YHEU SO0879 3D-STRUCTURE LYASE PLU0398 YPO0179/Y3960/YP0178 ENOLASE HD0737 PSPTO1630 1 68 3.0E-30 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CI104_RS01930 6d646129b8c136ff62d8f8d975892fef 72 SUPERFAMILY SSF118001 1 71 2.75E-29 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CI104_RS01930 6d646129b8c136ff62d8f8d975892fef 72 Gene3D G3DSA:1.10.10.610 1 71 7.5E-36 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CI104_RS01930 6d646129b8c136ff62d8f8d975892fef 72 Hamap MF_00690 UPF0270 protein YheU [yheU]. 1 70 25.619 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CI104_RS01930 6d646129b8c136ff62d8f8d975892fef 72 Pfam PF06794 Uncharacterised protein family (UPF0270) 1 69 8.4E-35 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CI104_RS01930 6d646129b8c136ff62d8f8d975892fef 72 PIRSF PIRSF006169 1 72 4.2E-37 T 28-03-2018 IPR010648 Uncharacterised protein family UPF0270 CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 SUPERFAMILY SSF53822 62 325 4.07E-43 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 SMART SM00354 2 75 8.5E-14 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 Gene3D G3DSA:3.40.50.2300 61 167 1.1E-22 T 28-03-2018 CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 Gene3D G3DSA:1.10.260.40 4 60 2.0E-12 T 28-03-2018 CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 Gene3D G3DSA:3.40.50.2300 168 329 7.8E-23 T 28-03-2018 CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 63 262 1.3E-10 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS20140 895e9317e5a9167dad6d1ca3c0c8e1e0 332 SUPERFAMILY SSF47413 4 60 1.13E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS04295 ac7fc90b701d3c8064f2ed2395c6b36c 323 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 321 2.3E-119 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CI104_RS04295 ac7fc90b701d3c8064f2ed2395c6b36c 323 PIRSF PIRSF004532 1 323 2.0E-131 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CI104_RS04295 ac7fc90b701d3c8064f2ed2395c6b36c 323 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 2 322 1.9E-165 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CI104_RS04295 ac7fc90b701d3c8064f2ed2395c6b36c 323 SUPERFAMILY SSF56655 3 322 2.32E-98 T 28-03-2018 CI104_RS04295 ac7fc90b701d3c8064f2ed2395c6b36c 323 Gene3D G3DSA:3.30.540.10 151 323 2.7E-37 T 28-03-2018 CI104_RS04295 ac7fc90b701d3c8064f2ed2395c6b36c 323 Gene3D G3DSA:3.30.540.10 1 148 9.8E-50 T 28-03-2018 CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 Gene3D G3DSA:1.20.144.10 14 196 3.3E-22 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 TIGRFAM TIGR00077 lspA: signal peptidase II 198 349 1.4E-40 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 SMART SM00014 73 182 2.0E-12 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 Pfam PF01569 PAP2 superfamily 73 185 7.3E-22 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 SUPERFAMILY SSF48317 8 193 1.44E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 Pfam PF01252 Signal peptidase (SPase) II 207 344 1.3E-34 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 198 351 15.799 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 244 252 1.1E-16 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 326 342 1.1E-16 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS26630 c5794a1b7be20738b3df97d546920056 358 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 290 305 1.1E-16 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 165 306 6.9E-18 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Gene3D G3DSA:3.90.76.10 129 255 8.8E-21 T 28-03-2018 CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Pfam PF12793 Sugar transport-related sRNA regulator N-term 5 118 3.7E-42 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Gene3D G3DSA:3.40.190.10 256 313 1.4E-5 T 28-03-2018 CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Hamap MF_01449 HTH-type transcriptional regulator SgrR [sgrR]. 1 551 65.378 T 28-03-2018 IPR023767 Transcriptional regulator SgrR CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Gene3D G3DSA:3.10.105.10 321 471 0.12 T 28-03-2018 CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 SUPERFAMILY SSF46785 22 68 5.79E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 SUPERFAMILY SSF53850 121 546 3.62E-63 T 28-03-2018 CI104_RS04800 82516c887123954c9dc5554d0805b3f9 551 Gene3D G3DSA:1.10.10.10 7 89 4.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 SUPERFAMILY SSF116734 222 448 4.25E-34 T 28-03-2018 CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 Gene3D G3DSA:3.90.220.20 198 407 4.7E-31 T 28-03-2018 CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 Gene3D G3DSA:3.90.220.20 3 197 5.6E-27 T 28-03-2018 CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 SUPERFAMILY SSF116734 7 223 1.26E-40 T 28-03-2018 CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 Gene3D G3DSA:1.10.287.1120 408 458 2.6E-8 T 28-03-2018 CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 Pfam PF01420 Type I restriction modification DNA specificity domain 249 417 5.1E-9 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CI104_RS21405 7f74266052c5aadbeab8efe73c24e993 465 Pfam PF01420 Type I restriction modification DNA specificity domain 41 200 6.7E-12 T 28-03-2018 IPR000055 Restriction endonuclease, type I, HsdS GO:0003677|GO:0006304 CI104_RS05505 b292cc9cd21f9ae5c67088eb52c42db2 256 SUPERFAMILY SSF53335 11 242 3.84E-49 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS05505 b292cc9cd21f9ae5c67088eb52c42db2 256 Pfam PF08241 Methyltransferase domain 49 145 8.8E-27 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CI104_RS05505 b292cc9cd21f9ae5c67088eb52c42db2 256 Gene3D G3DSA:3.40.50.150 30 247 1.8E-44 T 28-03-2018 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 Pfam PF04073 Aminoacyl-tRNA editing domain 257 376 1.5E-26 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 Hamap MF_01569 Proline--tRNA ligase [proS]. 1 571 43.011 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 PIRSF PIRSF001535 1 572 1.1E-277 T 28-03-2018 IPR023717 Prolyl-tRNA synthetase, class IIa, type 1 GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 SUPERFAMILY SSF55826 219 390 2.49E-31 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 TIGRFAM TIGR00409 proS_fam_II: proline--tRNA ligase 1 569 5.1E-280 T 28-03-2018 IPR004500 Prolyl-tRNA synthetase, class IIa, bacterial-type GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 Pfam PF03129 Anticodon binding domain 475 568 5.0E-21 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 Pfam PF00587 tRNA synthetase class II core domain (G, H, P, S and T) 95 459 7.2E-49 T 28-03-2018 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ P/ S/T) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 Gene3D G3DSA:3.40.50.800 461 572 2.4E-32 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 SUPERFAMILY SSF55681 407 478 1.73E-109 T 28-03-2018 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 SUPERFAMILY SSF55681 10 237 1.73E-109 T 28-03-2018 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 68 86 3.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 134 142 3.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 144 155 3.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 PRINTS PR01046 Prolyl-tRNA synthetase signature 104 115 3.2E-19 T 28-03-2018 IPR002316 Proline-tRNA ligase, class IIa GO:0004827|GO:0005524|GO:0005737|GO:0006433 KEGG: 00970+6.1.1.15|Reactome: R-HSA-379726 CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 SUPERFAMILY SSF52954 463 571 1.66E-33 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS05425 3f33995069e483b8b22db307cb03586d 572 Gene3D G3DSA:3.30.930.10 11 460 7.1E-102 T 28-03-2018 CI104_RS24160 f6550ffe346a8e2c4750dde779f33c00 198 Pfam PF07305 Protein of unknown function (DUF1454) 18 192 2.3E-82 T 28-03-2018 IPR009918 Protein of unknown function DUF1454 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 SUPERFAMILY SSF51556 68 367 1.02E-76 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 SUPERFAMILY SSF51338 8 68 9.47E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 SUPERFAMILY SSF51338 369 406 9.47E-29 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 Gene3D G3DSA:2.30.40.10 7 81 1.7E-18 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 TIGRFAM TIGR01224 hutI: imidazolonepropionase 31 406 1.4E-140 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 Gene3D G3DSA:3.20.20.140 82 367 1.4E-49 T 28-03-2018 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 Pfam PF01979 Amidohydrolase family 65 385 9.1E-14 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS08235 3b36bc474941142795b4b1f3a54e29fd 407 Hamap MF_00372 Imidazolonepropionase [hutI]. 8 407 39.435 T 28-03-2018 IPR005920 Imidazolonepropionase GO:0005737|GO:0016812|GO:0019556 KEGG: 00340+3.5.2.7|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 Hamap MF_01576 Bifunctional protein FolD [folD]. 3 283 37.849 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 75 102 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 204 233 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 239 255 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 256 274 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 34 56 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 110 131 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 PRINTS PR00085 Tetrahydrofolate dehydrogenase/cyclohydrolase family signature 155 175 1.1E-88 T 28-03-2018 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 Gene3D G3DSA:3.40.50.10860 11 140 1.1E-50 T 28-03-2018 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 Gene3D G3DSA:3.40.50.720 141 264 9.3E-39 T 28-03-2018 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 SUPERFAMILY SSF53223 3 122 6.14E-41 T 28-03-2018 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 ProSitePatterns PS00767 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 2. 260 268 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 Pfam PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain 124 279 6.1E-68 T 28-03-2018 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain GO:0004488 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 SUPERFAMILY SSF51735 123 282 5.27E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 Pfam PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain 5 121 3.3E-40 T 28-03-2018 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain GO:0004488|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS07030 12701d0425dbc9c2e674553e98c96d29 288 ProSitePatterns PS00766 Tetrahydrofolate dehydrogenase/cyclohydrolase signature 1. 76 101 - T 28-03-2018 IPR020867 Tetrahydrofolate dehydrogenase/cyclohydrolase, conserved site GO:0003824|GO:0055114 KEGG: 00670+1.5.1.5+3.5.4.9|KEGG: 00720+1.5.1.5+3.5.4.9|MetaCyc: PWY-1722|MetaCyc: PWY-2201|MetaCyc: PWY-3841|MetaCyc: PWY-5030|MetaCyc: PWY-5497|MetaCyc: PWY-6613|Reactome: R-HSA-196757 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 ProSitePatterns PS01278 Methylthiotransferase radical SAM domain signature. 144 164 - T 28-03-2018 IPR020612 Methylthiotransferase, conserved site GO:0051539 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 TIGRFAM TIGR01125 TIGR01125: ribosomal protein S12 methylthiotransferase RimO 9 438 7.1E-200 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 Pfam PF00919 Uncharacterized protein family UPF0004 9 95 2.1E-21 T 28-03-2018 IPR013848 Methylthiotransferase, N-terminal GO:0051539 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 Pfam PF04055 Radical SAM superfamily 146 323 1.1E-29 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 Gene3D G3DSA:2.40.50.140 380 441 1.9E-21 T 28-03-2018 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 TIGRFAM TIGR00089 TIGR00089: radical SAM methylthiotransferase, MiaB/RimO family 9 438 4.8E-109 T 28-03-2018 IPR005839 Methylthiotransferase GO:0006400|GO:0016740|GO:0051539 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 SMART SM00729 140 365 2.6E-54 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 SUPERFAMILY SSF102114 107 371 1.57E-53 T 28-03-2018 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 Hamap MF_01865 Ribosomal protein S12 methylthiotransferase RimO [rimO]. 8 440 63.477 T 28-03-2018 IPR005840 Ribosomal protein S12 methylthiotransferase RimO GO:0005737|GO:0016740|GO:0018339|GO:0051539 CI104_RS08595 379b3357e02882e04899d0a1bf12816f 441 Gene3D G3DSA:3.80.30.20 137 379 1.4E-46 T 28-03-2018 IPR023404 Radical SAM, alpha/beta horseshoe CI104_RS12370 33224f3a566bbd992b1018290fea391d 388 SUPERFAMILY SSF103473 6 379 4.97E-54 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12370 33224f3a566bbd992b1018290fea391d 388 Gene3D G3DSA:1.20.1250.20 191 384 6.8E-17 T 28-03-2018 CI104_RS12370 33224f3a566bbd992b1018290fea391d 388 Gene3D G3DSA:1.20.1250.20 3 190 2.4E-26 T 28-03-2018 CI104_RS12370 33224f3a566bbd992b1018290fea391d 388 Pfam PF07690 Major Facilitator Superfamily 10 322 1.7E-32 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00110 11122fccdc9b7fa13e88469496e2d772 120 ProDom PD277113 MEMBRANE INNER YIDG TRANSMEMBRANE STY3975 RV2273/MT2334 MB2296 8 71 2.0E-19 T 28-03-2018 IPR020264 Uncharacterised protein family YidG CI104_RS00110 11122fccdc9b7fa13e88469496e2d772 120 Pfam PF02656 Domain of unknown function (DUF202) 12 69 2.0E-10 T 28-03-2018 IPR003807 Domain of unknown function DUF202 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 PIRSF PIRSF001455 10 361 3.2E-106 T 28-03-2018 IPR030963 3-dehydroquinate synthase family GO:0009073|GO:0016838 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 Gene3D G3DSA:3.40.50.1970 4 172 3.4E-50 T 28-03-2018 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 Hamap MF_00110 3-dehydroquinate synthase [aroB]. 2 358 43.286 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 Pfam PF01761 3-dehydroquinate synthase 67 325 7.6E-109 T 28-03-2018 IPR030960 3-dehydroquinate synthase domain KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 Gene3D G3DSA:1.20.1090.10 173 362 6.6E-68 T 28-03-2018 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 TIGRFAM TIGR01357 aroB: 3-dehydroquinate synthase 13 354 3.7E-122 T 28-03-2018 IPR016037 3-dehydroquinate synthase AroB GO:0003856|GO:0005737|GO:0009073 KEGG: 00400+4.2.3.4|MetaCyc: PWY-6164 CI104_RS01795 87d79717d210023b8c1eb8307e4ef87b 362 SUPERFAMILY SSF56796 4 356 2.36E-117 T 28-03-2018 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:1.10.10.60 129 181 1.9E-10 T 28-03-2018 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 SMART SM00857 3 139 1.2E-50 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 SUPERFAMILY SSF46689 141 181 2.62E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:1.20.5.40 108 128 5.4E-13 T 28-03-2018 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:3.40.50.1390 1 107 3.4E-36 T 28-03-2018 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 Pfam PF00239 Resolvase, N terminal domain 4 137 2.2E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 SUPERFAMILY SSF53041 1 138 2.09E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS26515 7749ed6794122ced08d811e75084cd69 185 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 8.5E-11 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:1.10.10.60 129 181 1.9E-10 T 28-03-2018 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 SMART SM00857 3 139 1.2E-50 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 ProSitePatterns PS00398 Site-specific recombinases signature 2. 58 70 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 SUPERFAMILY SSF46689 141 181 2.62E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:1.20.5.40 108 128 5.4E-13 T 28-03-2018 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 Gene3D G3DSA:3.40.50.1390 1 107 3.4E-36 T 28-03-2018 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 Pfam PF00239 Resolvase, N terminal domain 4 137 2.2E-40 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 SUPERFAMILY SSF53041 1 138 2.09E-42 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27490 7749ed6794122ced08d811e75084cd69 185 Pfam PF02796 Helix-turn-helix domain of resolvase 141 181 8.5E-11 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS01255 8cbbc587b98b7ce3a10e42e9c0175767 194 Pfam PF01648 4'-phosphopantetheinyl transferase superfamily 88 147 4.8E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS01255 8cbbc587b98b7ce3a10e42e9c0175767 194 Gene3D G3DSA:3.90.470.20 99 178 4.5E-9 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS01255 8cbbc587b98b7ce3a10e42e9c0175767 194 SUPERFAMILY SSF56214 30 79 7.32E-10 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS01255 8cbbc587b98b7ce3a10e42e9c0175767 194 Gene3D G3DSA:3.90.470.20 18 98 1.1E-14 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS01255 8cbbc587b98b7ce3a10e42e9c0175767 194 SUPERFAMILY SSF56214 87 180 3.66E-15 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS02035 3e050db36a3a1453db4764a0a95be101 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 18 35 3.7E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CI104_RS02035 3e050db36a3a1453db4764a0a95be101 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 75 85 3.7E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CI104_RS02035 3e050db36a3a1453db4764a0a95be101 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 86 97 3.7E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CI104_RS02035 3e050db36a3a1453db4764a0a95be101 160 PRINTS PR00864 Type IV prepilin cysteine protease (C20) family signature 98 113 3.7E-16 T 28-03-2018 IPR014032 Peptidase A24A, prepilin type IV, bacterial CI104_RS02035 3e050db36a3a1453db4764a0a95be101 160 Pfam PF01478 Type IV leader peptidase family 10 113 5.6E-22 T 28-03-2018 IPR000045 Prepilin type IV endopeptidase, peptidase domain GO:0004190|GO:0016020 CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 138 166 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 SMART SM01266 5 59 5.0E-18 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 SUPERFAMILY SSF51161 3 182 1.66E-50 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 129 164 1.0E-10 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 92 109 0.0039 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 Pfam PF12464 Maltose acetyltransferase 7 57 2.6E-15 T 28-03-2018 IPR024688 Maltose/galactoside acetyltransferase GO:0016407 CI104_RS06560 2b15f644029277a3638675b4e931aa52 183 Gene3D G3DSA:2.160.10.10 2 183 5.2E-52 T 28-03-2018 CI104_RS02045 7942924803f495f6704a23c9f4d9ab9a 209 Hamap MF_01325_B 50S ribosomal protein L3 [rplC]. 1 207 40.706 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02045 7942924803f495f6704a23c9f4d9ab9a 209 TIGRFAM TIGR03625 L3_bact: 50S ribosomal protein uL3 3 204 4.7E-92 T 28-03-2018 IPR019927 Ribosomal protein L3, bacterial/organelle-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02045 7942924803f495f6704a23c9f4d9ab9a 209 SUPERFAMILY SSF50447 1 208 1.59E-80 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS02045 7942924803f495f6704a23c9f4d9ab9a 209 Gene3D G3DSA:4.10.960.10 57 165 4.4E-35 T 28-03-2018 CI104_RS02045 7942924803f495f6704a23c9f4d9ab9a 209 ProSitePatterns PS00474 Ribosomal protein L3 signature. 101 124 - T 28-03-2018 IPR019926 Ribosomal protein L3, conserved site CI104_RS02045 7942924803f495f6704a23c9f4d9ab9a 209 Pfam PF00297 Ribosomal protein L3 34 182 3.7E-14 T 28-03-2018 IPR000597 Ribosomal protein L3 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 SMART SM00883 2 95 1.8E-48 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 ProSitePatterns PS00681 Chaperonins cpn10 signature. 3 27 - T 28-03-2018 IPR018369 Chaperonin GroES, conserved site GO:0005524|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 Pfam PF00166 Chaperonin 10 Kd subunit 3 95 6.1E-29 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 25 46 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 3 18 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 60 72 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 PRINTS PR00297 10kDa chaperonin signature 82 95 1.9E-27 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 Gene3D G3DSA:2.30.33.40 1 96 8.6E-32 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 Hamap MF_00580 10 kDa chaperonin [groS]. 2 96 23.933 T 28-03-2018 IPR020818 GroES chaperonin family GO:0005737|GO:0006457 CI104_RS22690 bf2f28338771592655e65e54b8064644 97 SUPERFAMILY SSF50129 1 96 1.65E-30 T 28-03-2018 IPR011032 GroES-like CI104_RS13475 111ed6d26a4ad4c580752baef178a766 198 TIGRFAM TIGR00477 tehB: tellurite resistance protein TehB 1 196 2.1E-107 T 28-03-2018 IPR004537 Tellurite resistance methyltransferase, TehB GO:0005737|GO:0008757|GO:0046690 CI104_RS13475 111ed6d26a4ad4c580752baef178a766 198 Pfam PF03848 Tellurite resistance protein TehB 1 193 4.4E-104 T 28-03-2018 IPR015985 Tellurite resistance methyltransferase TehB-like domain CI104_RS13475 111ed6d26a4ad4c580752baef178a766 198 SUPERFAMILY SSF53335 6 196 7.89E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS13475 111ed6d26a4ad4c580752baef178a766 198 Gene3D G3DSA:3.40.50.150 1 197 1.2E-32 T 28-03-2018 CI104_RS12760 907554e9c05ecbbe3f1a15d55f13927e 457 SUPERFAMILY SSF103473 15 435 3.92E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12760 907554e9c05ecbbe3f1a15d55f13927e 457 Pfam PF00083 Sugar (and other) transporter 58 229 7.6E-20 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS12760 907554e9c05ecbbe3f1a15d55f13927e 457 Gene3D G3DSA:1.20.1250.20 8 226 2.1E-23 T 28-03-2018 CI104_RS12760 907554e9c05ecbbe3f1a15d55f13927e 457 Gene3D G3DSA:1.20.1250.20 231 443 4.3E-21 T 28-03-2018 CI104_RS12760 907554e9c05ecbbe3f1a15d55f13927e 457 Pfam PF07690 Major Facilitator Superfamily 268 428 3.9E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS04410 09d3e1a953f63e0a01ef48a4caa01a82 171 Pfam PF01931 Protein of unknown function DUF84 7 165 3.6E-53 T 28-03-2018 IPR026533 Non-canonical purine NTP phosphatase/PRRC1 CI104_RS04410 09d3e1a953f63e0a01ef48a4caa01a82 171 SUPERFAMILY SSF52972 2 167 2.62E-56 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS04410 09d3e1a953f63e0a01ef48a4caa01a82 171 Hamap MF_00648 Non-canonical purine NTP phosphatase. 2 171 29.744 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase CI104_RS04410 09d3e1a953f63e0a01ef48a4caa01a82 171 TIGRFAM TIGR00258 TIGR00258: inosine/xanthosine triphosphatase 7 170 2.7E-68 T 28-03-2018 IPR002786 Non-canonical purine NTP phosphatase CI104_RS04410 09d3e1a953f63e0a01ef48a4caa01a82 171 Gene3D G3DSA:3.90.950.10 1 170 2.3E-60 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS05040 6adaf53abbf5c3bef167f2d886c30bdd 120 PIRSF PIRSF006287 1 120 2.9E-49 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CI104_RS05040 6adaf53abbf5c3bef167f2d886c30bdd 120 ProDom PD020773 UPF0231 YACL UNCHARACTERISED UCP006287 VC0605 UNCHARACTERIZED 3'REGION VV2750 BCR OXIDASE 1 117 2.0E-60 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CI104_RS05040 6adaf53abbf5c3bef167f2d886c30bdd 120 Pfam PF06062 Uncharacterised protein family (UPF0231) 1 117 5.1E-42 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CI104_RS05040 6adaf53abbf5c3bef167f2d886c30bdd 120 Hamap MF_01053 UPF0231 protein YacL [yacL]. 1 119 29.508 T 28-03-2018 IPR008249 Uncharacterised protein family UPF0231 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 SUPERFAMILY SSF53774 3 335 1.57E-112 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 Gene3D G3DSA:3.40.50.1170 1 208 2.0E-80 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 8 16 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 SMART SM00870 5 323 1.7E-140 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 Gene3D G3DSA:3.40.50.40 210 337 4.9E-41 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 6 17 1.1E-16 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 83 101 1.1E-16 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 PRINTS PR00139 Asparaginase/glutaminase family signature 260 278 1.1E-16 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 PIRSF PIRSF001220 1 334 9.3E-98 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 84 94 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 Pfam PF00710 Asparaginase, N-terminal 6 188 1.9E-65 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 TIGRFAM TIGR00519 asnASE_I: L-asparaginase, type I 3 335 2.4E-137 T 28-03-2018 IPR006033 L-asparaginase, type I GO:0004067|GO:0006520 Reactome: R-HSA-70614 CI104_RS11695 0775b4df97d9a5c772a93e795cba7f3e 338 PIRSF PIRSF500176 2 332 3.9E-117 T 28-03-2018 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 SUPERFAMILY SSF46894 126 223 3.12E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 Gene3D G3DSA:3.40.50.2300 1 120 4.8E-31 T 28-03-2018 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 SUPERFAMILY SSF52172 2 118 9.68E-38 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 Gene3D G3DSA:1.10.10.10 121 227 2.4E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 SMART SM00448 1 112 5.0E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 TIGRFAM TIGR01387 cztR_silR_copR: heavy metal response regulator 3 221 9.7E-98 T 28-03-2018 IPR006291 Transcriptional regulatory protein PcoR, heavy metal response GO:0003677|GO:0006355 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 Pfam PF00486 Transcriptional regulatory protein, C terminal 146 221 1.2E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 SMART SM00862 146 221 2.1E-25 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS07055 bf6612f5e214f2114bf020e7dfa53ae8 227 Pfam PF00072 Response regulator receiver domain 3 113 1.5E-26 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS00680 640e6221a4617375033bd3b066fcef1d 446 Gene3D G3DSA:1.20.1250.20 15 215 1.8E-38 T 28-03-2018 CI104_RS00680 640e6221a4617375033bd3b066fcef1d 446 ProSitePatterns PS00217 Sugar transport proteins signature 2. 121 146 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS00680 640e6221a4617375033bd3b066fcef1d 446 ProSitePatterns PS00216 Sugar transport proteins signature 1. 79 95 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS00680 640e6221a4617375033bd3b066fcef1d 446 SUPERFAMILY SSF103473 11 442 1.96E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00680 640e6221a4617375033bd3b066fcef1d 446 Gene3D G3DSA:1.20.1250.20 237 444 6.0E-26 T 28-03-2018 CI104_RS00680 640e6221a4617375033bd3b066fcef1d 446 Pfam PF07690 Major Facilitator Superfamily 30 295 3.9E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS16050 e90f8ab403525f20bc06a7b2aff8a965 110 Gene3D G3DSA:2.30.30.110 1 110 9.8E-23 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CI104_RS16050 e90f8ab403525f20bc06a7b2aff8a965 110 PIRSF PIRSF033490 1 110 1.8E-22 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CI104_RS16050 e90f8ab403525f20bc06a7b2aff8a965 110 Pfam PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system 3 108 8.2E-25 T 28-03-2018 IPR003477 mRNA interferase PemK-like GO:0003677 CI104_RS16050 e90f8ab403525f20bc06a7b2aff8a965 110 SUPERFAMILY SSF50118 1 109 1.02E-30 T 28-03-2018 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 SUPERFAMILY SSF55252 87 155 1.44E-13 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 Pfam PF01316 Arginine repressor, DNA binding domain 17 76 6.7E-13 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 Pfam PF02863 Arginine repressor, C-terminal domain 88 152 9.8E-13 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 Gene3D G3DSA:1.10.10.10 11 75 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 94 139 0.004 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 PRINTS PR01467 Bacterial arginine repressor signature 46 61 1.0E-12 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 PRINTS PR01467 Bacterial arginine repressor signature 29 42 1.0E-12 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 PRINTS PR01467 Bacterial arginine repressor signature 125 140 1.0E-12 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 PRINTS PR01467 Bacterial arginine repressor signature 95 108 1.0E-12 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 Gene3D G3DSA:3.30.1360.40 82 153 1.6E-16 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 Hamap MF_00173 Arginine repressor [argR]. 1 159 43.331 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS22070 bd0cb52b86b3b68bc89261bc5b8f0b64 159 SUPERFAMILY SSF46785 10 78 5.44E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19975 0014a6ea7a249bd5e3ae8efdeed8e059 302 Hamap MF_00064 Sulfate adenylyltransferase subunit 2 [cysD]. 4 302 59.558 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CI104_RS19975 0014a6ea7a249bd5e3ae8efdeed8e059 302 PIRSF PIRSF002936 1 302 7.3E-156 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CI104_RS19975 0014a6ea7a249bd5e3ae8efdeed8e059 302 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 29 257 9.5E-67 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CI104_RS19975 0014a6ea7a249bd5e3ae8efdeed8e059 302 TIGRFAM TIGR02039 CysD: sulfate adenylyltransferase, small subunit 9 302 6.5E-169 T 28-03-2018 IPR011784 Sulphate adenylyltransferase, small subunit GO:0004781|GO:0019419 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CI104_RS19975 0014a6ea7a249bd5e3ae8efdeed8e059 302 SUPERFAMILY SSF52402 6 209 2.43E-75 T 28-03-2018 CI104_RS19975 0014a6ea7a249bd5e3ae8efdeed8e059 302 Gene3D G3DSA:3.40.50.620 2 300 1.1E-42 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS23360 7c296f13e9aa6e8e7ff78ad34fe18541 404 SUPERFAMILY SSF56925 235 374 1.8E-5 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS23360 7c296f13e9aa6e8e7ff78ad34fe18541 404 Pfam PF13729 F plasmid transfer operon, TraF, protein 40 322 1.1E-78 T 28-03-2018 IPR032811 Putative conjugal transfer protein TraF-related CI104_RS23360 7c296f13e9aa6e8e7ff78ad34fe18541 404 Gene3D G3DSA:2.40.160.60 11 399 2.3E-35 T 28-03-2018 CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 Gene3D G3DSA:3.30.1330.60 202 436 4.1E-32 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 379 396 1.5E-5 T 28-03-2018 CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 397 416 1.5E-5 T 28-03-2018 CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 417 436 1.5E-5 T 28-03-2018 CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 Pfam PF00691 OmpA family 331 428 8.8E-18 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 SUPERFAMILY SSF103088 321 434 1.7E-28 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 Pfam PF09850 Type VI secretion system protein DotU 65 267 2.1E-57 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 64 273 1.2E-62 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CI104_RS05625 28e39b897c04ea100a3af6c591c51790 436 TIGRFAM TIGR03350 type_VI_ompA: type VI secretion system peptidoglycan-associated domain 298 434 6.5E-50 T 28-03-2018 IPR017733 Type VI secretion system peptidoglycan-associated domain CI104_RS22325 bbe6bda68543748686c13c7655ce1de3 340 SUPERFAMILY SSF51735 3 154 1.07E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS22325 bbe6bda68543748686c13c7655ce1de3 340 Gene3D G3DSA:3.40.50.720 1 138 1.2E-36 T 28-03-2018 CI104_RS22325 bbe6bda68543748686c13c7655ce1de3 340 SUPERFAMILY SSF55347 127 272 6.05E-27 T 28-03-2018 CI104_RS22325 bbe6bda68543748686c13c7655ce1de3 340 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 199 1.1E-6 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS22325 bbe6bda68543748686c13c7655ce1de3 340 Gene3D G3DSA:3.30.360.10 139 340 1.5E-38 T 28-03-2018 CI104_RS22325 bbe6bda68543748686c13c7655ce1de3 340 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 115 6.8E-22 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 TIGRFAM TIGR02857 CydD: thiol reductant ABC exporter, CydD subunit 22 556 9.0E-190 T 28-03-2018 IPR014216 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD GO:0005524|GO:0016020|GO:0042883 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 Pfam PF00005 ABC transporter 369 513 3.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 SUPERFAMILY SSF90123 11 336 3.01E-55 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 ProSitePatterns PS00211 ABC transporters family signature. 486 500 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 Gene3D G3DSA:1.20.1560.10 7 338 1.7E-42 T 28-03-2018 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 SMART SM00382 375 560 1.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 SUPERFAMILY SSF52540 348 581 4.39E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 Gene3D G3DSA:3.40.50.300 339 588 1.2E-61 T 28-03-2018 CI104_RS08900 4834a1e8362735729d26a916d7c67b4a 588 Pfam PF00664 ABC transporter transmembrane region 25 291 2.5E-49 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 SUPERFAMILY SSF52540 298 523 3.23E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 Pfam PF00005 ABC transporter 336 467 2.9E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 Pfam PF00005 ABC transporter 18 184 4.8E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 SUPERFAMILY SSF52540 6 237 7.14E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 Gene3D G3DSA:3.40.50.300 3 282 2.7E-51 T 28-03-2018 CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 SMART SM00382 344 512 5.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 SMART SM00382 26 228 4.5E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 Gene3D G3DSA:3.40.50.300 283 530 8.0E-49 T 28-03-2018 CI104_RS08520 9764cbb32fc85028b411e7202a3320aa 531 Pfam PF12848 ABC transporter 224 309 1.8E-20 T 28-03-2018 IPR032781 ABC-transporter extension domain CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 Gene3D G3DSA:1.10.10.10 110 166 5.4E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 SMART SM00877 3 79 3.1E-27 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 21 40 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 Pfam PF00936 BMC domain 4 79 8.8E-22 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 4 54 3.0E-10 T 28-03-2018 CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 Pfam PF16365 Ethanolamine utilization protein EutK C-terminus 112 165 5.8E-34 T 28-03-2018 IPR032298 Ethanolamine utilization protein EutK, C-terminal CI104_RS18230 97e6d29b4ad913d705934f702e52a68e 168 SUPERFAMILY SSF143414 3 89 6.15E-24 T 28-03-2018 CI104_RS13990 e0c3ff3bcfffe3fe46b1bb4309775158 222 Pfam PF04012 PspA/IM30 family 2 216 1.4E-48 T 28-03-2018 IPR007157 PspA/IM30 CI104_RS13990 e0c3ff3bcfffe3fe46b1bb4309775158 222 Gene3D G3DSA:1.20.1170.10 4 222 1.5E-4 T 28-03-2018 CI104_RS13990 e0c3ff3bcfffe3fe46b1bb4309775158 222 TIGRFAM TIGR02977 phageshock_pspA: phage shock protein A 1 218 3.0E-92 T 28-03-2018 IPR014319 Phage shock protein, PspA CI104_RS10815 57a7640ba7a12c9af94505209749da6b 45 Pfam PF06528 Phage P2 GpE 7 39 2.0E-5 T 28-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 Gene3D G3DSA:1.20.1080.10 1 259 1.3E-77 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 Pfam PF00230 Major intrinsic protein 2 251 1.0E-74 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 ProSitePatterns PS00221 MIP family signature. 66 74 - T 28-03-2018 IPR022357 Major intrinsic protein, conserved site GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 TIGRFAM TIGR00861 MIP: MIP family channel proteins 13 251 3.4E-74 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 SUPERFAMILY SSF81338 9 257 1.57E-78 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 PRINTS PR00783 Major intrinsic protein family signature 234 254 2.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 PRINTS PR00783 Major intrinsic protein family signature 85 104 2.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 PRINTS PR00783 Major intrinsic protein family signature 9 28 2.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 PRINTS PR00783 Major intrinsic protein family signature 48 72 2.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 PRINTS PR00783 Major intrinsic protein family signature 184 206 2.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS24135 cdcd83ade306c61f41237cade6856843 281 PRINTS PR00783 Major intrinsic protein family signature 151 169 2.0E-51 T 28-03-2018 IPR000425 Major intrinsic protein GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-432047 CI104_RS12695 10ab99abd679974bbf9002659ed79c2d 300 Gene3D G3DSA:3.40.190.10 14 177 4.4E-25 T 28-03-2018 CI104_RS12695 10ab99abd679974bbf9002659ed79c2d 300 Gene3D G3DSA:3.40.190.10 178 299 1.5E-23 T 28-03-2018 CI104_RS12695 10ab99abd679974bbf9002659ed79c2d 300 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 25 296 1.9E-64 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CI104_RS12695 10ab99abd679974bbf9002659ed79c2d 300 SUPERFAMILY SSF53850 25 299 5.16E-62 T 28-03-2018 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 Gene3D G3DSA:1.10.10.60 171 226 3.6E-7 T 28-03-2018 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 Pfam PF12833 Helix-turn-helix domain 199 275 6.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 SUPERFAMILY SSF51215 27 161 1.96E-16 T 28-03-2018 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 229 271 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 SUPERFAMILY SSF46689 228 276 9.41E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 259 275 3.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 244 259 3.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 Hamap MF_01533 HTH-type transcriptional activator RhaR [rhaR]. 1 282 49.856 T 28-03-2018 IPR023699 Transcription activator HTH, RhaR GO:0003700|GO:0005737|GO:0019299|GO:0045893 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 Gene3D G3DSA:2.60.120.280 7 166 2.0E-20 T 28-03-2018 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 Pfam PF02311 AraC-like ligand binding domain 22 144 6.3E-21 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 SMART SM00342 192 275 2.5E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS24260 b9c0bd5eb1d38989c04914b86ae91562 282 Gene3D G3DSA:1.10.10.60 227 281 6.1E-13 T 28-03-2018 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Pfam PF07881 L-fucose isomerase, first N-terminal domain 7 174 1.4E-82 T 28-03-2018 IPR012888 L-fucose isomerase, N-terminal-1 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Hamap MF_01254 L-fucose isomerase [fucI]. 3 591 71.158 T 28-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 SUPERFAMILY SSF50443 356 590 1.54E-128 T 28-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 SUPERFAMILY SSF53743 3 355 3.53E-151 T 28-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Pfam PF02952 L-fucose isomerase, C-terminal domain 390 554 5.5E-55 T 28-03-2018 IPR015888 L-fucose isomerase, C-terminal GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Gene3D G3DSA:3.40.50.1070 5 175 6.6E-70 T 28-03-2018 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Gene3D G3DSA:3.40.275.10 177 339 2.2E-62 T 28-03-2018 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Gene3D G3DSA:3.20.14.10 341 589 2.5E-119 T 28-03-2018 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 Pfam PF07882 L-fucose isomerase, second N-terminal domain 175 354 1.4E-81 T 28-03-2018 IPR012889 L-fucose isomerase, N-terminal-2 GO:0005737|GO:0006004|GO:0008736 KEGG: 00051+5.3.1.25 CI104_RS20160 9ae241c5abfb4307fa079ce1cc3a2a95 591 TIGRFAM TIGR01089 fucI: L-fucose isomerase 5 590 0.0 T 28-03-2018 IPR005763 L-fucose isomerase GO:0005737|GO:0008736|GO:0019317|GO:0030145 KEGG: 00051+5.3.1.25 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 SMART SM00387 367 478 1.6E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 9 475 2.7E-157 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 SUPERFAMILY SSF55874 312 476 1.1E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 Gene3D G3DSA:1.10.287.130 247 319 3.4E-11 T 28-03-2018 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 SUPERFAMILY SSF47384 240 324 1.08E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 Pfam PF00512 His Kinase A (phospho-acceptor) domain 258 322 2.6E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 462 475 4.9E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 439 457 4.9E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 422 432 4.9E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 PRINTS PR00344 Bacterial sensor protein C-terminal signature 404 418 4.9E-10 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 477 1.6E-23 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 SMART SM00304 203 256 1.9E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 SMART SM00388 257 323 4.9E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS07050 57ccfb5222b6d66e9aefe0c347bb9372 479 Gene3D G3DSA:3.30.565.10 327 479 2.5E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 Gene3D G3DSA:3.40.50.1000 99 247 1.1E-37 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 SUPERFAMILY SSF56784 3 239 5.86E-59 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 TIGRFAM TIGR01449 PGP_bact: phosphoglycolate phosphatase, bacterial 10 239 1.2E-95 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 Gene3D G3DSA:3.40.50.1000 2 36 0.0077 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 92 209 7.8E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 209 5.0E-36 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 114 204 5.5E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 123 136 6.6E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 170 6.6E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 6.6E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 172 192 6.6E-13 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 Hamap MF_00495 Phosphoglycolate phosphatase [gph]. 7 240 36.476 T 28-03-2018 IPR006346 2-phosphoglycolate phosphatase, prokaryotic GO:0008967|GO:0046295 KEGG: 00630+3.1.3.18|MetaCyc: PWY-181 CI104_RS01815 19f14ef72977b497496294dbc1574fcc 252 Gene3D G3DSA:1.10.150.240 37 98 1.9E-20 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS22745 17b330f474f5f90bd615c25b4f2d2e46 155 Pfam PF01381 Helix-turn-helix 8 60 6.8E-16 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS22745 17b330f474f5f90bd615c25b4f2d2e46 155 SUPERFAMILY SSF47413 5 64 2.95E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS22745 17b330f474f5f90bd615c25b4f2d2e46 155 SMART SM00530 6 60 7.4E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS22745 17b330f474f5f90bd615c25b4f2d2e46 155 Pfam PF13239 2TM domain 77 153 4.3E-12 T 28-03-2018 IPR025698 2TM domain CI104_RS22745 17b330f474f5f90bd615c25b4f2d2e46 155 Gene3D G3DSA:1.10.260.40 3 81 7.4E-18 T 28-03-2018 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 TIGRFAM TIGR02205 septum_zipA: cell division protein ZipA 4 334 9.9E-107 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 Pfam PF04354 ZipA, C-terminal FtsZ-binding domain 208 333 6.5E-48 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 SUPERFAMILY SSF64383 206 339 1.16E-48 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 Hamap MF_00509 Cell division protein ZipA [zipA]. 3 336 25.176 T 28-03-2018 IPR011919 Cell division protein ZipA GO:0007049|GO:0016021|GO:0090529 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 ProDom PD035754 CELL DIVISION MEMBRANE ZIPA SEPTATION TRANSMEMBRANE HOMOLOG INNER CYCLE ZIPA 207 342 2.0E-73 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 SMART SM00771 205 334 6.9E-75 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CI104_RS18110 eff5f3904e3e7f925e7644b524c3152c 342 Gene3D G3DSA:3.30.1400.10 206 337 1.4E-54 T 28-03-2018 IPR007449 ZipA, C-terminal FtsZ-binding domain GO:0090529 CI104_RS12160 56db37972df77c731f14ef49a0f01f33 331 Gene3D G3DSA:2.40.440.10 91 234 8.0E-30 T 28-03-2018 CI104_RS12160 56db37972df77c731f14ef49a0f01f33 331 Gene3D G3DSA:3.10.350.10 38 87 4.1E-9 T 28-03-2018 CI104_RS12160 56db37972df77c731f14ef49a0f01f33 331 SUPERFAMILY SSF141523 95 232 3.27E-29 T 28-03-2018 CI104_RS12160 56db37972df77c731f14ef49a0f01f33 331 Pfam PF01476 LysM domain 42 85 5.2E-9 T 28-03-2018 IPR018392 LysM domain CI104_RS12160 56db37972df77c731f14ef49a0f01f33 331 SMART SM00257 41 85 4.6E-7 T 28-03-2018 IPR018392 LysM domain CI104_RS12160 56db37972df77c731f14ef49a0f01f33 331 Pfam PF03734 L,D-transpeptidase catalytic domain 97 232 8.6E-21 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CI104_RS16235 aa3eb9974e026acf9fe3822161911d6c 163 Pfam PF15953 Putative propanediol utilisation 7 157 1.4E-54 T 28-03-2018 IPR030992 Microcompartment protein PduM GO:0005198 CI104_RS16235 aa3eb9974e026acf9fe3822161911d6c 163 TIGRFAM TIGR04493 microcomp_PduM: microcompartment protein PduM 7 159 9.8E-64 T 28-03-2018 IPR030992 Microcompartment protein PduM GO:0005198 CI104_RS04870 668a52f0decf7baccc37d3bbcf3ae0e0 588 Gene3D G3DSA:3.90.1310.10 36 235 1.2E-43 T 28-03-2018 CI104_RS04870 668a52f0decf7baccc37d3bbcf3ae0e0 588 SUPERFAMILY SSF56519 63 233 3.53E-46 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CI104_RS04870 668a52f0decf7baccc37d3bbcf3ae0e0 588 Gene3D G3DSA:3.40.710.10 236 585 1.0E-78 T 28-03-2018 CI104_RS04870 668a52f0decf7baccc37d3bbcf3ae0e0 588 SUPERFAMILY SSF56601 235 563 1.16E-86 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS04870 668a52f0decf7baccc37d3bbcf3ae0e0 588 Pfam PF03717 Penicillin-binding Protein dimerisation domain 69 220 1.1E-19 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CI104_RS04870 668a52f0decf7baccc37d3bbcf3ae0e0 588 Pfam PF00905 Penicillin binding protein transpeptidase domain 260 554 7.3E-84 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS15410 f94c6c272e6854d5b7edd08d97c50c13 322 TIGRFAM TIGR00452 TIGR00452: tRNA (mo5U34)-methyltransferase 7 320 1.1E-145 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CI104_RS15410 f94c6c272e6854d5b7edd08d97c50c13 322 SUPERFAMILY SSF53335 90 322 2.67E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS15410 f94c6c272e6854d5b7edd08d97c50c13 322 Gene3D G3DSA:3.40.50.150 74 322 1.8E-23 T 28-03-2018 CI104_RS15410 f94c6c272e6854d5b7edd08d97c50c13 322 Pfam PF08003 Protein of unknown function (DUF1698) 7 321 4.9E-171 T 28-03-2018 IPR027555 tRNA (mo5U34)-methyltransferase-like CI104_RS15410 f94c6c272e6854d5b7edd08d97c50c13 322 Hamap MF_01590 tRNA U34 carboxymethyltransferase [cmoB]. 12 321 54.353 T 28-03-2018 IPR010017 tRNA U34 carboxymethyltransferase GO:0002098|GO:0016765 CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 Pfam PF01476 LysM domain 346 387 1.3E-13 T 28-03-2018 IPR018392 LysM domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 Pfam PF01476 LysM domain 405 445 5.4E-11 T 28-03-2018 IPR018392 LysM domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 SUPERFAMILY SSF53955 102 252 5.06E-41 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 Gene3D G3DSA:1.10.530.10 69 249 4.5E-34 T 28-03-2018 CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 Pfam PF01464 Transglycosylase SLT domain 105 219 2.8E-29 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 SUPERFAMILY SSF54106 344 387 5.36E-11 T 28-03-2018 IPR018392 LysM domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 SUPERFAMILY SSF54106 403 446 5.36E-11 T 28-03-2018 IPR018392 LysM domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 Gene3D G3DSA:3.10.350.10 402 448 5.0E-16 T 28-03-2018 CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 Gene3D G3DSA:3.10.350.10 342 401 1.2E-14 T 28-03-2018 CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 SMART SM00257 345 388 1.1E-14 T 28-03-2018 IPR018392 LysM domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 SMART SM00257 404 446 6.0E-13 T 28-03-2018 IPR018392 LysM domain CI104_RS05510 ce6930b974b8790763fa05a0b9215168 455 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 124 152 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 Gene3D G3DSA:3.40.190.10 90 180 7.2E-10 T 28-03-2018 CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 Gene3D G3DSA:3.40.190.10 181 265 3.2E-10 T 28-03-2018 CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 Pfam PF03466 LysR substrate binding domain 90 292 6.0E-22 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 SUPERFAMILY SSF46785 3 89 1.38E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 Gene3D G3DSA:1.10.10.10 1 85 1.6E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 SUPERFAMILY SSF53850 90 292 1.81E-26 T 28-03-2018 CI104_RS06155 e0f781042da15e0660ffcf2d716e3b39 300 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 63 1.4E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS01935 6c17d5041482ddbb17383af4d2ceee01 338 PIRSF PIRSF005211 11 338 1.8E-106 T 28-03-2018 IPR012020 AB hydrolase 4 family CI104_RS01935 6c17d5041482ddbb17383af4d2ceee01 338 Pfam PF00561 alpha/beta hydrolase fold 74 313 4.4E-26 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS01935 6c17d5041482ddbb17383af4d2ceee01 338 ProSitePatterns PS01133 Uncharacterized protein family UPF0017 signature. 240 281 - T 28-03-2018 IPR000952 AB hydrolase 4, conserved site CI104_RS01935 6c17d5041482ddbb17383af4d2ceee01 338 SUPERFAMILY SSF53474 36 316 1.03E-37 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS01935 6c17d5041482ddbb17383af4d2ceee01 338 Gene3D G3DSA:3.40.50.1820 47 335 1.9E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 SUPERFAMILY SSF52440 2 122 7.48E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 SUPERFAMILY SSF56059 123 312 2.43E-60 T 28-03-2018 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 Gene3D G3DSA:3.40.50.20 2 129 5.5E-52 T 28-03-2018 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 TIGRFAM TIGR01380 glut_syn: glutathione synthase 2 311 3.1E-140 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 Pfam PF02951 Prokaryotic glutathione synthetase, N-terminal domain 2 120 3.5E-47 T 28-03-2018 IPR004215 Prokaryotic glutathione synthetase, N-terminal GO:0004363|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 Pfam PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain 124 296 1.8E-79 T 28-03-2018 IPR004218 Prokaryotic glutathione synthetase, ATP-binding GO:0004363|GO:0005524|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 Gene3D G3DSA:3.30.470.20 192 300 1.1E-16 T 28-03-2018 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 Gene3D G3DSA:3.30.1490.20 138 191 1.2E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS04215 20c73dd76c2df89cb8f4e474f9c03a4b 315 Hamap MF_00162 Glutathione synthetase [gshB]. 1 315 181.971 T 28-03-2018 IPR006284 Glutathione synthetase, prokaryotic GO:0004363|GO:0005829|GO:0006750 KEGG: 00270+6.3.2.3|KEGG: 00480+6.3.2.3 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 Hamap MF_01563 HTH-type transcriptional regulator UlaR [ulaR]. 1 251 69.507 T 28-03-2018 IPR023711 Transcription regulator HTH, UlaR GO:0005737|GO:0045892 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 SUPERFAMILY SSF46785 5 60 5.74E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 Pfam PF00455 DeoR C terminal sensor domain 76 230 1.7E-36 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 Gene3D G3DSA:1.10.10.10 1 77 2.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 SMART SM00420 6 58 1.0E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 62 1.5E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 SMART SM01134 74 232 3.4E-37 T 28-03-2018 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.2E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.2E-5 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 SUPERFAMILY SSF100950 75 234 2.72E-23 T 28-03-2018 CI104_RS22470 7063f63f39b3519b9cd67c6e7e754959 251 Gene3D G3DSA:3.40.50.1360 78 238 8.8E-24 T 28-03-2018 CI104_RS10835 db2d59e6397f3178d17e92a0c17d2e63 389 Gene3D G3DSA:3.55.50.10 121 209 1.1E-6 T 28-03-2018 CI104_RS10835 db2d59e6397f3178d17e92a0c17d2e63 389 SUPERFAMILY SSF69279 29 196 3.4E-23 T 28-03-2018 CI104_RS10835 db2d59e6397f3178d17e92a0c17d2e63 389 Pfam PF05954 Phage late control gene D protein (GPD) 127 341 7.6E-12 T 28-03-2018 CI104_RS26340 fcc0c184dc4fa8644ba4641a034de45e 318 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 2 195 2.5E-40 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS26340 fcc0c184dc4fa8644ba4641a034de45e 318 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 1 307 1.4E-94 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 SUPERFAMILY SSF53223 9 270 2.37E-109 T 28-03-2018 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 SMART SM01274 81 261 4.2E-107 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PIRSF PIRSF000106 1 563 4.8E-226 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 Gene3D G3DSA:3.40.50.10380 15 268 8.9E-113 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 Pfam PF03949 Malic enzyme, NAD binding domain 271 530 1.9E-104 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 SUPERFAMILY SSF51735 271 562 2.06E-94 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 Gene3D G3DSA:3.40.50.720 269 565 1.1E-105 T 28-03-2018 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 Pfam PF00390 Malic enzyme, N-terminal domain 81 261 1.5E-79 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 SMART SM00919 271 531 3.0E-132 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 267 283 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 183 205 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 147 176 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 408 424 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 298 314 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 242 260 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 PRINTS PR00072 Malic enzyme signature 87 111 5.2E-73 T 28-03-2018 IPR001891 Malic oxidoreductase GO:0004470|GO:0004471 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 Hamap MF_01619 NAD-dependent malic enzyme [maeA]. 4 565 72.561 T 28-03-2018 IPR023667 NAD-dependent malic enzyme, proteobacteria GO:0004471|GO:0055114 KEGG: 00620+1.1.1.38 CI104_RS13115 869152c1c5eb3914da7720d10b322743 565 ProSitePatterns PS00331 Malic enzymes signature. 267 283 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CI104_RS23735 c2c39a68993a9a3859c6ca93f7042bb0 256 SUPERFAMILY SSF110399 1 236 1.31E-81 T 28-03-2018 CI104_RS23735 c2c39a68993a9a3859c6ca93f7042bb0 256 Hamap MF_00443 Thiazole synthase [thiG]. 1 253 42.911 T 28-03-2018 IPR008867 Thiazole synthase GO:0009228 KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CI104_RS23735 c2c39a68993a9a3859c6ca93f7042bb0 256 Pfam PF05690 Thiazole biosynthesis protein ThiG 4 247 9.5E-109 T 28-03-2018 IPR033983 Thiazole synthase ThiG KEGG: 00730+2.8.1.10|MetaCyc: PWY-6891|MetaCyc: PWY-6892 CI104_RS23735 c2c39a68993a9a3859c6ca93f7042bb0 256 Gene3D G3DSA:3.20.20.70 1 255 9.7E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 SUPERFAMILY SSF52402 159 275 1.67E-22 T 28-03-2018 CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 PRINTS PR01438 Universal stress protein signature 235 247 5.6E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 PRINTS PR01438 Universal stress protein signature 158 176 5.6E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 PRINTS PR01438 Universal stress protein signature 253 275 5.6E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 Pfam PF00582 Universal stress protein family 199 275 8.0E-14 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 Pfam PF00582 Universal stress protein family 1 152 4.1E-16 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 Gene3D G3DSA:3.40.50.620 1 156 2.9E-15 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 SUPERFAMILY SSF52402 2 153 4.77E-16 T 28-03-2018 CI104_RS26205 543e6eb79d311d4eb97c37604ff55c70 275 Gene3D G3DSA:3.40.50.620 157 275 2.5E-20 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS12460 df26f871049c646b180610d459483807 107 Pfam PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme 33 95 8.8E-16 T 28-03-2018 IPR018660 C-type lysozyme inhibitor CI104_RS12460 df26f871049c646b180610d459483807 107 SUPERFAMILY SSF141488 27 105 7.59E-23 T 28-03-2018 IPR018660 C-type lysozyme inhibitor CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 Gene3D G3DSA:1.10.166.10 3 69 2.0E-27 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 Pfam PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal 3 69 2.4E-24 T 28-03-2018 IPR023180 Tetrahydrodipicolinate-N-succinyltransferase, chain A, domain 1 KEGG: 00300+2.3.1.117 CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 Hamap MF_00811 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase [dapD]. 1 272 58.655 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 133 166 0.0019 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 Gene3D G3DSA:2.160.10.10 87 257 4.5E-36 T 28-03-2018 CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 134 162 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 175 209 6.2E-13 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 TIGRFAM TIGR00965 dapD: 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase 3 273 7.9E-163 T 28-03-2018 IPR005664 Tetrahydrodipicolinate N-succinyltransferase, transferase hexapeptide repeat family GO:0008666|GO:0009089 KEGG: 00300+2.3.1.117 CI104_RS05270 fdb50a0897b912257434d5d43a72306a 274 SUPERFAMILY SSF51161 1 256 2.36E-80 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 SUPERFAMILY SSF53474 414 655 1.05E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 ProSitePatterns PS00708 Prolyl endopeptidase family serine active site. 507 537 - T 28-03-2018 IPR002471 Peptidase S9, serine active site GO:0004252|GO:0006508 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 Pfam PF00326 Prolyl oligopeptidase family 463 676 2.2E-67 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 SUPERFAMILY SSF50993 2 407 2.51E-77 T 28-03-2018 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 Gene3D G3DSA:3.40.50.1820 1 676 4.5E-81 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 Pfam PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain 3 403 2.8E-112 T 28-03-2018 IPR023302 Peptidase S9A, N-terminal domain GO:0004252|GO:0070008 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 500 519 1.7E-52 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 588 603 1.7E-52 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 472 496 1.7E-52 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 530 550 1.7E-52 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 446 464 1.7E-52 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CI104_RS15285 07331ed5eb6b427e5fce069c502413ca 686 PRINTS PR00862 Prolyl oligopeptidase serine protease (S9A) signature 606 628 1.7E-52 T 28-03-2018 IPR002470 Peptidase S9A, prolyl oligopeptidase GO:0004252|GO:0006508 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 PIRSF PIRSF039101 1 505 5.8E-205 T 28-03-2018 IPR034762 Bacterial/eukaryotic lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 262 279 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 215 231 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 199 209 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 244 257 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 PRINTS PR00982 Lysyl-tRNA synthetase signature 386 402 1.9E-39 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 Pfam PF01336 OB-fold nucleic acid binding domain 68 146 1.6E-15 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 Gene3D G3DSA:3.30.930.10 156 501 2.0E-104 T 28-03-2018 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 TIGRFAM TIGR00499 lysS_bact: lysine--tRNA ligase 14 504 3.2E-238 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 SUPERFAMILY SSF55681 162 502 4.98E-123 T 28-03-2018 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 Gene3D G3DSA:2.40.50.140 15 154 1.4E-40 T 28-03-2018 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 SUPERFAMILY SSF50249 14 155 5.63E-48 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 Hamap MF_00252 Lysine--tRNA ligase [lysS]. 21 505 45.549 T 28-03-2018 IPR002313 Lysine-tRNA ligase, class II GO:0004824|GO:0005524|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS20995 9980c1c48d852fd9ab416c42ac1796c8 505 Pfam PF00152 tRNA synthetases class II (D, K and N) 162 501 4.2E-82 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS03285 8a82c7ef30d3053afd4350033c538bac 167 Pfam PF01863 Protein of unknown function DUF45 93 149 6.8E-11 T 28-03-2018 IPR002725 Protein of unknown function DUF45 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00448 4 120 3.8E-15 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 165 4.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 165 181 4.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 181 193 4.0E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF46894 146 207 2.38E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 150 204 1.1E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 SUPERFAMILY SSF52172 3 135 5.27E-21 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:3.40.50.2300 3 131 3.2E-21 T 28-03-2018 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 SMART SM00421 148 205 4.2E-16 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 Hamap MF_00981 Transcriptional regulatory protein RcsB [rcsB]. 1 214 51.521 T 28-03-2018 IPR030864 Transcriptional regulatory protein RcsB GO:0000160|GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 Pfam PF00072 Response regulator receiver domain 6 120 1.2E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 165 192 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS17235 a4d0d02728a620eaca1f24bb25ab0c46 216 Gene3D G3DSA:1.10.10.10 132 215 2.7E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00120 ac79276c3694046766e81456710ea29a 440 Hamap MF_01030 D-serine dehydratase [dsdA]. 1 440 276.039 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CI104_RS00120 ac79276c3694046766e81456710ea29a 440 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 71 401 7.0E-67 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS00120 ac79276c3694046766e81456710ea29a 440 SUPERFAMILY SSF53686 75 432 3.16E-54 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS00120 ac79276c3694046766e81456710ea29a 440 Gene3D G3DSA:3.40.50.1100 113 228 1.1E-24 T 28-03-2018 CI104_RS00120 ac79276c3694046766e81456710ea29a 440 Gene3D G3DSA:3.40.50.1100 229 439 2.6E-28 T 28-03-2018 CI104_RS00120 ac79276c3694046766e81456710ea29a 440 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 106 120 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CI104_RS00120 ac79276c3694046766e81456710ea29a 440 TIGRFAM TIGR02035 D_Ser_am_lyase: D-serine ammonia-lyase 7 436 1.1E-233 T 28-03-2018 IPR011780 D-serine ammonia-lyase GO:0008721|GO:0030170|GO:0046416 KEGG: 00260+4.3.1.18 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 107 190 1.7E-39 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 SUPERFAMILY SSF52794 105 205 1.24E-34 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 Gene3D G3DSA:3.40.50.2300 35 84 0.024 T 28-03-2018 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 Gene3D G3DSA:3.40.50.2300 105 202 5.1E-37 T 28-03-2018 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 SUPERFAMILY SSF52794 4 88 2.96E-10 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 Pfam PF02378 Phosphotransferase system, EIIC 233 496 1.5E-17 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 108 192 1.7E-18 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS16955 cf13105ac34648d82aa6ebc5e7740bb8 563 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 214 552 2.7E-149 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 Gene3D G3DSA:3.40.50.720 50 246 2.0E-52 T 28-03-2018 CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 Gene3D G3DSA:3.40.50.720 1 49 7.7E-13 T 28-03-2018 CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 136 164 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 244 8.4E-58 T 28-03-2018 CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 149 168 5.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 170 187 5.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 78 89 5.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 208 228 5.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 5.7E-33 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 7 180 0.0045 T 28-03-2018 CI104_RS09650 b42037af0cff20a5b1f7776335d286c4 247 SUPERFAMILY SSF51735 5 244 2.38E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS18215 290c0942e6333c55153a804d0e7657cd 289 SUPERFAMILY SSF53187 200 277 3.77E-54 T 28-03-2018 CI104_RS18215 290c0942e6333c55153a804d0e7657cd 289 SUPERFAMILY SSF53187 57 152 3.77E-54 T 28-03-2018 CI104_RS18215 290c0942e6333c55153a804d0e7657cd 289 Gene3D G3DSA:3.40.630.40 44 277 5.6E-57 T 28-03-2018 CI104_RS18215 290c0942e6333c55153a804d0e7657cd 289 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 59 273 6.5E-52 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CI104_RS18215 290c0942e6333c55153a804d0e7657cd 289 SMART SM00646 118 273 3.9E-68 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CI104_RS16165 7c78f0a1003e3babf826a53571bf471b 319 TIGRFAM TIGR00380 cobD: cobalamin biosynthesis protein CobD 8 308 3.8E-76 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CI104_RS16165 7c78f0a1003e3babf826a53571bf471b 319 Hamap MF_00024 Cobalamin biosynthesis protein CbiB [cbiB]. 1 318 106.587 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CI104_RS16165 7c78f0a1003e3babf826a53571bf471b 319 Pfam PF03186 CobD/Cbib protein 7 297 8.3E-106 T 28-03-2018 IPR004485 Cobalamin biosynthesis CobD/CbiB GO:0009236|GO:0016021|GO:0048472 CI104_RS28440 47292e24be07b22e353f29c8f69c63b8 243 PIRSF PIRSF002859 1 243 8.5E-144 T 28-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CI104_RS28440 47292e24be07b22e353f29c8f69c63b8 243 Pfam PF05818 Enterobacterial TraT complement resistance protein 32 243 4.4E-81 T 28-03-2018 IPR008874 Enterobacterial TraT complement resistance GO:0019867|GO:0046999 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 SUPERFAMILY SSF46785 31 111 1.16E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 SUPERFAMILY SSF53850 134 325 5.79E-30 T 28-03-2018 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 Gene3D G3DSA:3.40.190.10 120 210 1.6E-15 T 28-03-2018 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 61 71 2.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 50 61 2.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 71 82 2.8E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 Gene3D G3DSA:3.40.190.10 211 302 1.0E-20 T 28-03-2018 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 35 94 4.4E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 Pfam PF03466 LysR substrate binding domain 120 324 2.1E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS00340 dec0159a497e5876ee3fc62973325a2b 326 Gene3D G3DSA:1.10.10.10 21 115 2.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08825 6037b506391112bbfad33dd8707d55dd 552 Pfam PF11398 Protein of unknown function (DUF2813) 1 375 2.5E-154 T 28-03-2018 IPR022602 Protein of unknown function DUF2813 CI104_RS08825 6037b506391112bbfad33dd8707d55dd 552 Gene3D G3DSA:3.40.50.300 1 348 1.4E-18 T 28-03-2018 CI104_RS08825 6037b506391112bbfad33dd8707d55dd 552 SUPERFAMILY SSF52540 1 91 3.5E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08825 6037b506391112bbfad33dd8707d55dd 552 SUPERFAMILY SSF52540 163 341 3.5E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22320 f6c354d8e5fb81117ffa5cc14039ce91 355 Gene3D G3DSA:3.40.50.720 28 156 1.8E-15 T 28-03-2018 CI104_RS22320 f6c354d8e5fb81117ffa5cc14039ce91 355 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 49 143 1.9E-5 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS22320 f6c354d8e5fb81117ffa5cc14039ce91 355 SUPERFAMILY SSF55347 155 328 1.41E-22 T 28-03-2018 CI104_RS22320 f6c354d8e5fb81117ffa5cc14039ce91 355 Gene3D G3DSA:3.30.360.10 157 353 4.0E-24 T 28-03-2018 CI104_RS22320 f6c354d8e5fb81117ffa5cc14039ce91 355 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 158 231 2.0E-4 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS22320 f6c354d8e5fb81117ffa5cc14039ce91 355 SUPERFAMILY SSF51735 47 168 3.31E-17 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 Gene3D G3DSA:3.40.50.970 364 540 1.5E-41 T 28-03-2018 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 TIGRFAM TIGR00232 tktlase_bact: transketolase 5 662 0.0 T 28-03-2018 IPR005478 Transketolase, bacterial-like GO:0004802 KEGG: 00030+2.2.1.1|KEGG: 00710+2.2.1.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|MetaCyc: PWY-6901 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 4 334 3.3E-172 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 ProSitePatterns PS00802 Transketolase signature 2. 467 483 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 ProSitePatterns PS00801 Transketolase signature 1. 12 32 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 SUPERFAMILY SSF52518 5 331 6.7E-122 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 Gene3D G3DSA:3.40.50.970 1 363 3.8E-129 T 28-03-2018 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 SMART SM00861 355 525 6.0E-66 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 Pfam PF02779 Transketolase, pyrimidine binding domain 354 524 6.2E-44 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 SUPERFAMILY SSF52922 533 663 1.24E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 Gene3D G3DSA:3.40.50.920 541 663 7.2E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 Pfam PF02780 Transketolase, C-terminal domain 540 655 9.4E-19 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CI104_RS04275 d325be2f00849161ec010e380b9c20a0 663 SUPERFAMILY SSF52518 336 526 4.03E-67 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS00035 561f290b9ea4f1d5a1bcb0300bb0cffd 292 Pfam PF05035 2-keto-3-deoxy-galactonokinase 9 286 1.7E-95 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 SUPERFAMILY SSF47681 226 306 3.27E-18 T 28-03-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 Pfam PF09077 Mu B transposition protein, C terminal 227 304 2.2E-20 T 28-03-2018 IPR009084 B transposition protein, C-terminal GO:0003677|GO:0006313 CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 Gene3D G3DSA:1.10.1180.10 228 305 9.6E-25 T 28-03-2018 CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 Gene3D G3DSA:1.10.260.40 34 89 3.5E-4 T 28-03-2018 CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 Gene3D G3DSA:1.10.10.10 1 33 0.0061 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 Pfam PF13401 AAA domain 98 213 9.3E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 SUPERFAMILY SSF52540 76 287 5.64E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14945 395f250990e9bf99a936dc683c4e9955 312 Gene3D G3DSA:3.40.50.300 90 227 1.1E-9 T 28-03-2018 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 9.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 250 267 9.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 9.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 279 298 9.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 148 170 9.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 9.3E-73 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 244 256 4.8E-20 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 328 345 4.8E-20 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 150 161 4.8E-20 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 4.8E-20 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 4.8E-20 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 328 344 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 Gene3D G3DSA:2.40.160.10 32 376 2.2E-50 T 28-03-2018 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 Pfam PF00267 Gram-negative porin 27 376 1.4E-149 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS17225 c3876afd9b2f0da1e0fe7eb983249166 376 SUPERFAMILY SSF56935 22 376 3.92E-79 T 28-03-2018 CI104_RS21390 8bab5035b853a3c019da0cc531a36b86 100 Pfam PF14384 BrnA antitoxin of type II toxin-antitoxin system 39 93 1.3E-15 T 28-03-2018 IPR025528 BrnA antitoxin of type II toxin-antitoxin system CI104_RS25285 416a808f4fc13ba68768cf7d39153fcd 46 TIGRFAM TIGR01030 rpmH_bact: ribosomal protein bL34 1 44 3.6E-27 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS25285 416a808f4fc13ba68768cf7d39153fcd 46 Hamap MF_00391 50S ribosomal protein L34 [rpmH]. 1 44 16.163 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS25285 416a808f4fc13ba68768cf7d39153fcd 46 ProSitePatterns PS00784 Ribosomal protein L34 signature. 2 21 - T 28-03-2018 IPR020939 Ribosomal protein L34, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS25285 416a808f4fc13ba68768cf7d39153fcd 46 ProDom PD003101 RIBOSOMAL L34 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID L34 MITOCHONDRIAL PEPTIDE SEQUENCING 1 31 4.0E-11 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS25285 416a808f4fc13ba68768cf7d39153fcd 46 Pfam PF00468 Ribosomal protein L34 1 44 1.7E-24 T 28-03-2018 IPR000271 Ribosomal protein L34 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 115 129 9.4E-34 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 143 155 9.4E-34 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 165 177 9.4E-34 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 43 52 9.4E-34 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 103 115 9.4E-34 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR00951 Flagellar biosynthetic protein FliP signature 233 243 9.4E-34 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 Pfam PF00813 FliP family 48 239 7.5E-80 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 ProSitePatterns PS01060 Flagella transport protein fliP family signature 1. 172 187 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 172 192 2.9E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 64 84 2.9E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 217 242 2.9E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 45 64 2.9E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 193 214 2.9E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 PRINTS PR01302 Type III secretion system inner membrane P protein family signature 84 103 2.9E-68 T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 TIGRFAM TIGR01103 fliP: flagellar biosynthetic protein FliP 47 243 4.5E-95 T 28-03-2018 IPR005837 Flagellar transport protein FliP GO:0009306|GO:0016020 CI104_RS15895 0b5356865ad37f71b9c99a583a9b5132 245 ProSitePatterns PS01061 Flagella transport protein fliP family signature 2. 220 232 - T 28-03-2018 IPR005838 Type III secretion system inner membrane P protein GO:0009306|GO:0016020 CI104_RS16070 f5e88ed47fee3f8521874a367f9e5fb6 310 Pfam PF03734 L,D-transpeptidase catalytic domain 98 231 2.9E-19 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CI104_RS16070 f5e88ed47fee3f8521874a367f9e5fb6 310 Gene3D G3DSA:2.40.440.10 92 233 3.6E-31 T 28-03-2018 CI104_RS16070 f5e88ed47fee3f8521874a367f9e5fb6 310 SUPERFAMILY SSF141523 175 232 2.22E-28 T 28-03-2018 CI104_RS16070 f5e88ed47fee3f8521874a367f9e5fb6 310 SUPERFAMILY SSF141523 96 147 2.22E-28 T 28-03-2018 CI104_RS21225 3561b5bf462b3f1353796a257ac3e21e 148 Gene3D G3DSA:3.40.630.30 1 148 1.4E-33 T 28-03-2018 CI104_RS21225 3561b5bf462b3f1353796a257ac3e21e 148 Pfam PF00583 Acetyltransferase (GNAT) family 18 120 1.6E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS21225 3561b5bf462b3f1353796a257ac3e21e 148 SUPERFAMILY SSF55729 3 146 1.03E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS21225 3561b5bf462b3f1353796a257ac3e21e 148 TIGRFAM TIGR01575 rimI: ribosomal-protein-alanine acetyltransferase 11 142 1.5E-45 T 28-03-2018 IPR006464 N-acetyltransferase RimI/Ard1 GO:0006474|GO:0016407 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 Gene3D G3DSA:3.40.50.150 1 226 1.1E-39 T 28-03-2018 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 SUPERFAMILY SSF53335 3 213 1.53E-50 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 24 30 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 20 34 6.9E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 151 168 6.9E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 193 213 6.9E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 170 188 6.9E-23 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 Pfam PF01555 DNA methylase 21 130 1.1E-8 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS28085 87183e2af7c15d1e47a0bd81f20b6e51 233 Pfam PF01555 DNA methylase 149 206 3.3E-19 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 SMART SM00382 28 211 1.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 Gene3D G3DSA:3.40.50.300 1 237 4.1E-72 T 28-03-2018 CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 SUPERFAMILY SSF50331 236 353 2.04E-20 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 SUPERFAMILY SSF52540 4 242 4.82E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 Pfam PF00005 ABC transporter 20 161 5.2E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 Gene3D G3DSA:2.40.50.140 286 339 8.3E-6 T 28-03-2018 CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 Pfam PF08402 TOBE domain 276 346 2.1E-7 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS03315 d9ee82f9ec3368390d99f31265a7eca5 356 Gene3D G3DSA:2.40.50.100 240 285 0.0017 T 28-03-2018 CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 SUPERFAMILY SSF52540 257 501 8.09E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 Pfam PF00005 ABC transporter 33 182 1.2E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 Pfam PF00005 ABC transporter 285 442 1.2E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 SUPERFAMILY SSF52540 16 239 6.15E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 SMART SM00382 42 230 4.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 SMART SM00382 294 491 1.1E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 Gene3D G3DSA:3.40.50.300 265 507 4.0E-39 T 28-03-2018 CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 Gene3D G3DSA:3.40.50.300 14 242 2.3E-55 T 28-03-2018 CI104_RS07235 3d4428e70ce05424f13ce4a10e495783 514 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 Pfam PF03473 MOSC domain 139 262 5.8E-29 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 Gene3D G3DSA:2.40.33.20 1 271 3.2E-50 T 28-03-2018 CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 Gene3D G3DSA:3.10.20.30 272 368 4.8E-16 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 Pfam PF03476 MOSC N-terminal beta barrel domain 2 116 5.3E-29 T 28-03-2018 IPR005303 MOSC, N-terminal beta barrel CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 SUPERFAMILY SSF54292 287 367 2.75E-20 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 SUPERFAMILY SSF50800 147 264 3.71E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 SUPERFAMILY SSF50800 4 50 3.71E-17 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 292 362 5.3E-13 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS09200 f99ec98eb1810854232cb245959f363a 369 SUPERFAMILY SSF141673 4 132 3.14E-28 T 28-03-2018 CI104_RS02385 972488822b31b53127ea595f5ed19953 276 SMART SM01134 84 242 1.8E-11 T 28-03-2018 CI104_RS02385 972488822b31b53127ea595f5ed19953 276 SMART SM00420 16 68 3.0E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS02385 972488822b31b53127ea595f5ed19953 276 Pfam PF00455 DeoR C terminal sensor domain 93 238 8.0E-15 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS02385 972488822b31b53127ea595f5ed19953 276 Gene3D G3DSA:1.10.10.10 1 67 2.6E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02385 972488822b31b53127ea595f5ed19953 276 Pfam PF08220 DeoR-like helix-turn-helix domain 16 67 5.1E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS02385 972488822b31b53127ea595f5ed19953 276 SUPERFAMILY SSF100950 93 220 1.2E-7 T 28-03-2018 CI104_RS02385 972488822b31b53127ea595f5ed19953 276 Gene3D G3DSA:3.40.50.1360 86 247 8.2E-11 T 28-03-2018 CI104_RS02385 972488822b31b53127ea595f5ed19953 276 SUPERFAMILY SSF46785 15 75 1.43E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 Pfam PF00343 Carbohydrate phosphorylase 93 794 0.0 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 Gene3D G3DSA:3.40.50.2000 460 780 4.3E-135 T 28-03-2018 CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 SUPERFAMILY SSF53756 6 795 7.85E-295 T 28-03-2018 CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 ProSitePatterns PS00102 Phosphorylase pyridoxal-phosphate attachment site. 638 650 - T 28-03-2018 IPR035090 Phosphorylase pyridoxal-phosphate attachment site KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 PIRSF PIRSF000460 1 797 2.5E-205 T 28-03-2018 IPR000811 Glycosyl transferase, family 35 GO:0005975|GO:0008184 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 TIGRFAM TIGR02093 P_ylase: glycogen/starch/alpha-glucan phosphorylases 8 794 0.0 T 28-03-2018 IPR011833 Glycogen/starch/alpha-glucan phosphorylase GO:0004645|GO:0005975|GO:0030170 KEGG: 00500+2.4.1.1|MetaCyc: PWY-5941|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|Reactome: R-HSA-70221 CI104_RS01655 951e71202476f1eb0337dc826bfee485 797 Gene3D G3DSA:3.40.50.2000 8 459 1.4E-170 T 28-03-2018 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 ProSitePatterns PS00130 Uracil-DNA glycosylase signature. 57 66 - T 28-03-2018 IPR018085 Uracil-DNA glycosylase, active site GO:0006281|GO:0016799 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 TIGRFAM TIGR00628 ung: uracil-DNA glycosylase 6 214 7.4E-89 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 Pfam PF03167 Uracil DNA glycosylase superfamily 55 209 1.4E-27 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 SMART SM00986 49 210 1.8E-40 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 SMART SM00987 49 210 1.8E-40 T 28-03-2018 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 SUPERFAMILY SSF52141 3 220 9.38E-95 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 Gene3D G3DSA:3.40.470.10 1 229 1.2E-104 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS18875 67268816fe151d3a64689f32e482c011 229 Hamap MF_00148 Uracil-DNA glycosylase [ung]. 4 221 40.162 T 28-03-2018 IPR002043 Uracil-DNA glycosylase family 1 GO:0004844|GO:0006281|GO:0006284 Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.230.10 76 166 2.4E-34 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54768 9 75 5.13E-24 T 28-03-2018 CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF03719 Ribosomal protein S5, C-terminal domain 87 157 1.8E-30 T 28-03-2018 IPR005324 Ribosomal protein S5, C-terminal GO:0003735|GO:0005840|GO:0006412 CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 Hamap MF_01307_B 30S ribosomal protein S5 [rpsE]. 1 163 34.99 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 ProSitePatterns PS00585 Ribosomal protein S5 signature. 28 60 - T 28-03-2018 IPR018192 Ribosomal protein S5, N-terminal, conserved site CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 Pfam PF00333 Ribosomal protein S5, N-terminal domain 11 74 1.7E-29 T 28-03-2018 IPR013810 Ribosomal protein S5, N-terminal GO:0003723|GO:0003735|GO:0005840|GO:0006412 CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 SUPERFAMILY SSF54211 79 159 3.54E-27 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 TIGRFAM TIGR01021 rpsE_bact: ribosomal protein uS5 10 163 1.4E-71 T 28-03-2018 IPR005712 Ribosomal protein S5, bacterial-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02130 5e26b9261841fedfc3f886e196ad600b 167 Gene3D G3DSA:3.30.160.20 10 72 4.2E-28 T 28-03-2018 CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 SUPERFAMILY SSF54826 7 136 1.11E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 Pfam PF13378 Enolase C-terminal domain-like 187 404 3.5E-39 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 Gene3D G3DSA:3.30.390.10 8 143 2.1E-35 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 111 136 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 SMART SM00922 184 284 2.9E-15 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 Gene3D G3DSA:3.20.20.120 144 413 3.8E-54 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 39 136 1.9E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS20075 eabc9ce680aba937627fbd0c62a18d5d 446 SUPERFAMILY SSF51604 138 415 3.37E-83 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS11675 554b0787e92257dc39f303b9449f238d 327 Pfam PF00248 Aldo/keto reductase family 15 319 3.8E-61 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS11675 554b0787e92257dc39f303b9449f238d 327 SUPERFAMILY SSF51430 1 319 1.14E-85 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS11675 554b0787e92257dc39f303b9449f238d 327 PRINTS PR00069 Aldo-keto reductase signature 188 217 2.0E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11675 554b0787e92257dc39f303b9449f238d 327 PRINTS PR00069 Aldo-keto reductase signature 154 171 2.0E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11675 554b0787e92257dc39f303b9449f238d 327 PRINTS PR00069 Aldo-keto reductase signature 120 138 2.0E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11675 554b0787e92257dc39f303b9449f238d 327 Gene3D G3DSA:3.20.20.100 1 327 6.1E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 Pfam PF00107 Zinc-binding dehydrogenase 197 329 4.5E-25 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 SMART SM00829 12 367 0.0051 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 SUPERFAMILY SSF51735 160 333 6.33E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 SUPERFAMILY SSF50129 1 186 2.28E-71 T 28-03-2018 IPR011032 GroES-like CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.0E-223 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 SUPERFAMILY SSF50129 318 369 5.18E-12 T 28-03-2018 IPR011032 GroES-like CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 151 1.5E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 Gene3D G3DSA:3.90.180.10 1 188 4.1E-59 T 28-03-2018 CI104_RS13580 4c484611c082d99cfad9e51398f3071b 372 Gene3D G3DSA:3.40.50.720 189 312 3.9E-26 T 28-03-2018 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Gene3D G3DSA:4.10.320.10 118 159 1.5E-16 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Gene3D G3DSA:3.30.559.10 160 404 4.1E-91 T 28-03-2018 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Pfam PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 176 404 2.4E-81 T 28-03-2018 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Pfam PF00364 Biotin-requiring enzyme 5 76 4.3E-17 T 28-03-2018 IPR000089 Biotin/lipoyl attachment CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Pfam PF02817 e3 binding domain 114 146 8.5E-13 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 TIGRFAM TIGR01347 sucB: dihydrolipoyllysine-residue succinyltransferase, E2 component of oxoglutarate dehydrogenase (succinyl-transferring) complex 4 406 7.5E-194 T 28-03-2018 IPR006255 Dihydrolipoamide succinyltransferase GO:0004149|GO:0006099|GO:0045252 KEGG: 00020+2.3.1.61|KEGG: 00310+2.3.1.61|MetaCyc: PWY-5084|Reactome: R-HSA-389661|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 SUPERFAMILY SSF51230 2 95 3.14E-24 T 28-03-2018 IPR011053 Single hybrid motif CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 SUPERFAMILY SSF52777 176 405 1.38E-89 T 28-03-2018 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Gene3D G3DSA:3.90.1170.30 47 117 1.9E-4 T 28-03-2018 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 Gene3D G3DSA:3.90.1170.30 1 46 7.1E-14 T 28-03-2018 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 SUPERFAMILY SSF47005 106 151 8.37E-12 T 28-03-2018 IPR004167 E3-binding domain GO:0008152|GO:0016746 Reactome: R-HSA-389661 CI104_RS07915 53173e29171fbb3c92a01fd252d27862 406 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 28 57 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Pfam PF17176 tRNA-binding domain 535 651 1.0E-36 T 28-03-2018 IPR033442 tRNA(Met) cytidine acetyltransferase TmcA, tRNA-binding domain KEGG: 00650+2.3.1.19 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 SUPERFAMILY SSF52540 175 284 1.68E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 SUPERFAMILY SSF55729 368 418 3.42E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 SUPERFAMILY SSF55729 454 511 3.42E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Gene3D G3DSA:3.40.630.30 355 523 9.6E-15 T 28-03-2018 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Hamap MF_01886 tRNA(Met) cytidine acetyltransferase TmcA [tmcA]. 18 650 47.291 T 28-03-2018 IPR024914 tRNA(Met) cytidine acetyltransferase TmcA GO:0000049|GO:0002101|GO:0051391|GO:0051392 KEGG: 00650+2.3.1.19 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Gene3D G3DSA:3.40.50.300 170 288 1.7E-5 T 28-03-2018 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Pfam PF13718 GNAT acetyltransferase 2 370 479 4.3E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Pfam PF13718 GNAT acetyltransferase 2 481 531 4.8E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Pfam PF08351 Domain of unknown function (DUF1726) 66 139 5.2E-6 T 28-03-2018 IPR013562 tRNA(Met) cytidine acetyltransferase TmcA, N-terminal Reactome: R-HSA-6790901 CI104_RS18380 d4a75cbcf1688320a5f38c8dcaf1a33a 669 Pfam PF05127 Helicase 197 337 1.3E-39 T 28-03-2018 IPR007807 Helicase domain Reactome: R-HSA-6790901 CI104_RS06900 3b737c00705e8544f339fac57f325540 238 Pfam PF11340 Protein of unknown function (DUF3142) 81 176 2.2E-20 T 28-03-2018 IPR021488 Protein of unknown function DUF3142 CI104_RS06900 3b737c00705e8544f339fac57f325540 238 Gene3D G3DSA:3.20.20.80 78 221 1.8E-4 T 28-03-2018 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 Gene3D G3DSA:2.30.30.60 946 996 5.8E-13 T 28-03-2018 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 Gene3D G3DSA:3.30.70.100 997 1091 1.8E-21 T 28-03-2018 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 SUPERFAMILY SSF82861 845 928 1.22E-8 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 509 826 2.4E-94 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 Pfam PF00924 Mechanosensitive ion channel 887 1086 2.6E-62 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 SUPERFAMILY SSF82689 997 1097 7.32E-27 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 959 993 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 Pfam PF12795 Mechanosensitive ion channel porin domain 50 289 8.7E-62 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 Gene3D G3DSA:3.40.50.300 32 796 1.7E-4 T 28-03-2018 CI104_RS06595 4ca019009d9075ae85db88a96c13db04 1119 SUPERFAMILY SSF50182 930 995 1.05E-16 T 28-03-2018 IPR010920 LSM domain CI104_RS09195 b1a41eeeedea51ae5bef97ac53c28759 180 Pfam PF07126 Cell-division protein ZapC 3 167 2.0E-67 T 28-03-2018 IPR009809 Cell division protein ZapC CI104_RS09195 b1a41eeeedea51ae5bef97ac53c28759 180 Hamap MF_00906 Cell division protein ZapC [zapC]. 2 178 39.792 T 28-03-2018 IPR009809 Cell division protein ZapC CI104_RS09195 b1a41eeeedea51ae5bef97ac53c28759 180 PIRSF PIRSF010252 1 179 3.4E-64 T 28-03-2018 IPR009809 Cell division protein ZapC CI104_RS02845 4baf920f92da6f66a71173badae6bd0b 351 Gene3D G3DSA:3.10.310.10 1 180 4.6E-70 T 28-03-2018 CI104_RS02845 4baf920f92da6f66a71173badae6bd0b 351 SUPERFAMILY SSF54506 2 166 4.87E-58 T 28-03-2018 CI104_RS02845 4baf920f92da6f66a71173badae6bd0b 351 Gene3D G3DSA:3.10.310.10 181 335 1.6E-51 T 28-03-2018 CI104_RS02845 4baf920f92da6f66a71173badae6bd0b 351 Pfam PF04303 PrpF protein 2 351 1.0E-112 T 28-03-2018 IPR007400 PrpF protein CI104_RS02845 4baf920f92da6f66a71173badae6bd0b 351 SUPERFAMILY SSF54506 170 351 1.73E-56 T 28-03-2018 CI104_RS19060 d56357d63172949842bce30332d385b3 292 SUPERFAMILY SSF111331 7 289 1.44E-92 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CI104_RS19060 d56357d63172949842bce30332d385b3 292 Pfam PF01513 ATP-NAD kinase 8 271 1.8E-79 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CI104_RS19060 d56357d63172949842bce30332d385b3 292 Hamap MF_00361 NAD kinase [nadK]. 6 287 33.2 T 28-03-2018 IPR002504 NAD kinase GO:0003951|GO:0006741|GO:0008152 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CI104_RS19060 d56357d63172949842bce30332d385b3 292 Gene3D G3DSA:2.60.200.30 142 264 7.9E-41 T 28-03-2018 IPR017437 ATP-NAD kinase, PpnK-type, all-beta GO:0003951|GO:0008152|GO:0019674 KEGG: 00760+2.7.1.23|MetaCyc: PWY-5083|MetaCyc: PWY-7268|MetaCyc: PWY-7269|Reactome: R-HSA-196807 CI104_RS19060 d56357d63172949842bce30332d385b3 292 Gene3D G3DSA:3.40.50.10330 1 141 3.8E-39 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Pfam PF14492 Elongation Factor G, domain II 411 485 1.1E-33 T 28-03-2018 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Gene3D G3DSA:3.30.230.10 501 624 1.2E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Gene3D G3DSA:3.40.50.300 1 293 4.8E-58 T 28-03-2018 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SMART SM00838 611 698 1.1E-49 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 TIGRFAM TIGR00484 EF-G: translation elongation factor G 1 703 0.0 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Pfam PF00679 Elongation factor G C-terminus 611 696 2.8E-28 T 28-03-2018 IPR000640 Elongation factor EFG, domain V-like CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Gene3D G3DSA:3.30.70.870 407 500 2.4E-36 T 28-03-2018 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Pfam PF03764 Elongation factor G, domain IV 486 609 1.3E-44 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Pfam PF00009 Elongation factor Tu GTP binding domain 9 288 3.7E-67 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SMART SM00889 487 609 5.6E-71 T 28-03-2018 IPR005517 Translation elongation factor EFG/EF2, domain IV GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SUPERFAMILY SSF54211 486 610 9.1E-40 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Gene3D G3DSA:3.30.70.240 625 702 5.8E-29 T 28-03-2018 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Hamap MF_00054_B Elongation factor G [fusA]. 6 702 111.905 T 28-03-2018 IPR004540 Translation elongation factor EFG/EF2 GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 PRINTS PR00315 GTP-binding elongation factor signature 85 95 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 PRINTS PR00315 GTP-binding elongation factor signature 137 146 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 PRINTS PR00315 GTP-binding elongation factor signature 101 112 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 PRINTS PR00315 GTP-binding elongation factor signature 12 25 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.7E-16 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Gene3D G3DSA:2.40.30.10 295 406 1.2E-29 T 28-03-2018 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 10 187 4.8E-32 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SUPERFAMILY SSF54980 611 700 7.19E-27 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SUPERFAMILY SSF52540 6 288 1.07E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SUPERFAMILY SSF54980 411 488 3.02E-25 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 Pfam PF03144 Elongation factor Tu domain 2 331 398 5.2E-16 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS02010 d9ee61706e23339b7c0761e946e85609 704 SUPERFAMILY SSF50447 271 411 5.08E-35 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS11745 bc62af306fc39da34868e762eb129490 208 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 68 89 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CI104_RS11745 bc62af306fc39da34868e762eb129490 208 Pfam PF01066 CDP-alcohol phosphatidyltransferase 27 89 1.5E-9 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 SMART SM00345 7 66 8.5E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 Gene3D G3DSA:3.90.1150.10 373 469 1.2E-24 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 Gene3D G3DSA:3.40.640.10 123 372 7.9E-49 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.8E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 SUPERFAMILY SSF53383 81 466 2.06E-95 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 Gene3D G3DSA:1.10.10.10 1 70 7.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 Pfam PF00155 Aminotransferase class I and II 106 459 1.1E-36 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS21440 1aaf2c07a6886f50224f1cc8623e9fee 481 SUPERFAMILY SSF46785 1 70 1.75E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 497 583 3.9E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 Pfam PF07730 Histidine kinase 390 453 8.7E-18 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 Pfam PF00672 HAMP domain 177 224 3.3E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 SMART SM00387 494 587 1.0E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 Gene3D G3DSA:3.30.565.10 454 587 2.2E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 SMART SM00304 176 228 7.3E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 SUPERFAMILY SSF158472 178 226 2.88E-6 T 28-03-2018 CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 PIRSF PIRSF003167 1 597 1.5E-192 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 35 129 3.2E-10 T 28-03-2018 IPR029095 NarX-like, N-terminal CI104_RS14375 0b89021e62a58f3d1aebd1bad2ec6ddb 598 SUPERFAMILY SSF55874 466 583 1.03E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 Pfam PF13654 AAA domain 140 288 1.1E-18 T 28-03-2018 CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 Pfam PF05362 Lon protease (S16) C-terminal proteolytic domain 435 537 3.7E-10 T 28-03-2018 IPR008269 Peptidase S16, Lon proteolytic domain GO:0004176|GO:0004252|GO:0006508 CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 SUPERFAMILY SSF54211 347 542 8.72E-34 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 462 481 8.3E-10 T 28-03-2018 CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 432 451 8.3E-10 T 28-03-2018 CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 PRINTS PR00830 Endopeptidase La (Lon) serine protease (S16) signature 492 510 8.3E-10 T 28-03-2018 CI104_RS09240 f19e66ca0ebed6abe4bb6a6923f30f74 586 Gene3D G3DSA:3.30.230.10 326 568 5.3E-30 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 Gene3D G3DSA:1.20.1250.20 18 224 3.9E-34 T 28-03-2018 CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 Pfam PF07690 Major Facilitator Superfamily 34 400 6.9E-45 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 35 417 5.8E-168 T 28-03-2018 CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 TIGRFAM TIGR00712 glpT: glycerol-3-phosphate transporter 1 440 4.3E-268 T 28-03-2018 IPR005267 Glycerol-3-phosphate transporter GO:0015169|GO:0015794|GO:0016021 CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 ProSitePatterns PS00942 glpT family of transporters signature. 153 169 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 Gene3D G3DSA:1.20.1250.20 240 450 2.2E-30 T 28-03-2018 CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 SUPERFAMILY SSF103473 13 442 9.16E-83 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS17335 42ec47d98b09e76945f36cc96845f483 452 PIRSF PIRSF002808 5 451 8.6E-175 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 SUPERFAMILY SSF111369 194 270 5.62E-8 T 28-03-2018 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 Pfam PF00529 HlyD membrane-fusion protein of T1SS 36 346 1.2E-16 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 61 289 4.2E-13 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 TIGRFAM TIGR00998 8a0101: efflux pump membrane protein 20 345 1.6E-145 T 28-03-2018 IPR005694 Efflux pump membrane protein Emr GO:0006855|GO:0015238 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 Gene3D G3DSA:2.40.50.100 60 138 2.5E-13 T 28-03-2018 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 Gene3D G3DSA:2.40.50.100 209 365 3.3E-6 T 28-03-2018 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 SUPERFAMILY SSF111369 56 112 6.54E-6 T 28-03-2018 CI104_RS19625 6e31cb8d3985320e07513b1c4d7f127d 390 Gene3D G3DSA:1.10.287.470 139 186 1.0E-6 T 28-03-2018 CI104_RS23365 201a140c222f6938d95c32c3d624eeb6 171 SUPERFAMILY SSF46785 12 144 6.23E-34 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23365 201a140c222f6938d95c32c3d624eeb6 171 Pfam PF01475 Ferric uptake regulator family 20 138 2.4E-15 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CI104_RS23365 201a140c222f6938d95c32c3d624eeb6 171 Gene3D G3DSA:1.10.10.10 1 92 6.8E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08880 7685e403ced062aa096db5195bf558e7 72 Gene3D G3DSA:2.40.50.140 1 72 7.1E-36 T 28-03-2018 CI104_RS08880 7685e403ced062aa096db5195bf558e7 72 TIGRFAM TIGR00008 infA: translation initiation factor IF-1 3 71 5.1E-39 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CI104_RS08880 7685e403ced062aa096db5195bf558e7 72 SUPERFAMILY SSF50249 1 70 5.36E-29 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS08880 7685e403ced062aa096db5195bf558e7 72 Pfam PF01176 Translation initiation factor 1A / IF-1 7 70 9.2E-28 T 28-03-2018 IPR006196 RNA-binding domain, S1, IF1 type GO:0003723|GO:0003743|GO:0006413 CI104_RS08880 7685e403ced062aa096db5195bf558e7 72 Hamap MF_00075 Translation initiation factor IF-1 [infA]. 1 72 27.442 T 28-03-2018 IPR004368 Translation initiation factor IF-1 GO:0003743|GO:0006413 CI104_RS08880 7685e403ced062aa096db5195bf558e7 72 SMART SM00316 4 72 2.8E-7 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 Pfam PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain 6 213 1.4E-78 T 28-03-2018 IPR022417 Porphobilinogen deaminase, N-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 SUPERFAMILY SSF53850 5 219 1.45E-85 T 28-03-2018 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 Gene3D G3DSA:3.30.160.40 221 306 2.2E-24 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 TIGRFAM TIGR00212 hemC: hydroxymethylbilane synthase 6 297 1.2E-111 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 PIRSF PIRSF001438 1 311 7.3E-122 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 Gene3D G3DSA:3.40.190.10 2 106 5.9E-44 T 28-03-2018 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 Pfam PF03900 Porphobilinogen deaminase, C-terminal domain 226 295 9.8E-24 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 ProSitePatterns PS00533 Porphobilinogen deaminase cofactor-binding site. 231 247 - T 28-03-2018 IPR022419 Porphobilinogen deaminase, dipyrromethane cofactor binding site GO:0004418|GO:0018160|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 PRINTS PR00151 Porphobilinogen deaminase signature 143 160 2.1E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 PRINTS PR00151 Porphobilinogen deaminase signature 45 65 2.1E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 PRINTS PR00151 Porphobilinogen deaminase signature 230 247 2.1E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 PRINTS PR00151 Porphobilinogen deaminase signature 76 95 2.1E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 PRINTS PR00151 Porphobilinogen deaminase signature 124 141 2.1E-49 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 SUPERFAMILY SSF54782 220 308 5.89E-28 T 28-03-2018 IPR022418 Porphobilinogen deaminase, C-terminal GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 Gene3D G3DSA:3.40.190.10 107 199 9.9E-38 T 28-03-2018 CI104_RS24825 e2ac2d4041565682ac66a6ff1893f1dc 313 Hamap MF_00260 Porphobilinogen deaminase [hemC]. 5 297 39.866 T 28-03-2018 IPR000860 Porphobilinogen deaminase GO:0004418|GO:0033014 KEGG: 00860+2.5.1.61|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS09865 4a986e47f484a4ff6ca25f4474b3e018 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 282 2.8E-80 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS09865 4a986e47f484a4ff6ca25f4474b3e018 286 Gene3D G3DSA:3.20.20.70 2 286 4.3E-95 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS09865 4a986e47f484a4ff6ca25f4474b3e018 286 SUPERFAMILY SSF51569 4 282 1.9E-88 T 28-03-2018 CI104_RS09865 4a986e47f484a4ff6ca25f4474b3e018 286 PIRSF PIRSF001359 1 282 1.6E-92 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS09865 4a986e47f484a4ff6ca25f4474b3e018 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 4 281 5.4E-92 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 Pfam PF00155 Aminotransferase class I and II 27 392 1.1E-94 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 Gene3D G3DSA:3.90.1150.10 300 396 1.7E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 243 256 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 Gene3D G3DSA:3.90.1150.10 1 76 4.0E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 Gene3D G3DSA:3.40.640.10 77 299 1.2E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 SUPERFAMILY SSF53383 1 396 1.53E-116 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS09135 89b3698f570a32641e81fab076b15754 396 PRINTS PR00799 Aspartate aminotransferase signature 341 359 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 PRINTS PR00799 Aspartate aminotransferase signature 273 298 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 PRINTS PR00799 Aspartate aminotransferase signature 206 218 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS09135 89b3698f570a32641e81fab076b15754 396 PRINTS PR00799 Aspartate aminotransferase signature 175 194 7.3E-40 T 28-03-2018 IPR000796 Aspartate/other aminotransferase GO:0006520|GO:0008483 KEGG: 00220+2.6.1.1|KEGG: 00250+2.6.1.1|KEGG: 00270+2.6.1.1|KEGG: 00330+2.6.1.1|KEGG: 00350+2.6.1.1|KEGG: 00360+2.6.1.1|KEGG: 00400+2.6.1.1|KEGG: 00401+2.6.1.1|KEGG: 00710+2.6.1.1|KEGG: 00950+2.6.1.1|KEGG: 00960+2.6.1.1|MetaCyc: PWY-5913|MetaCyc: PWY-6318|MetaCyc: PWY-6638|MetaCyc: PWY-6642|MetaCyc: PWY-6643|MetaCyc: PWY-7115|MetaCyc: PWY-7117|MetaCyc: PWY-7383 CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 SUPERFAMILY SSF51126 53 336 5.96E-60 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 SMART SM00912 63 183 5.5E-45 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 Gene3D G3DSA:2.160.20.10 49 345 1.3E-57 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 Gene3D G3DSA:2.160.20.10 378 469 0.2 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 Gene3D G3DSA:2.160.20.10 470 647 6.8E-4 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 Gene3D G3DSA:2.160.20.10 720 803 0.02 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 Gene3D G3DSA:2.160.20.10 648 719 0.014 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 411 438 0.0047 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 371 394 0.0076 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 495 518 0.16 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 594 633 0.6 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 441 466 2.5 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01731 fil_hemag_20aa: adhesin HecA family 20-residue repeat (two copies) 521 540 0.4 T 28-03-2018 IPR010069 Filamentous haemagglutinin, 20-residue x2 repeat CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 TIGRFAM TIGR01901 adhes_NPXG: filamentous hemagglutinin family N-terminal domain 81 177 6.9E-21 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CI104_RS05110 ca8a46fee088e86fe07f213e97d18558 824 Pfam PF05860 haemagglutination activity domain 47 181 2.2E-29 T 28-03-2018 IPR008638 Filamentous haemagglutinin, N-terminal CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 SUPERFAMILY SSF48008 76 213 4.45E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 70 9.8E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 Gene3D G3DSA:1.20.120.530 72 214 3.0E-29 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 SMART SM00895 80 212 2.7E-18 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 SUPERFAMILY SSF46785 13 74 3.96E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 SMART SM00345 12 70 3.3E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 Pfam PF07729 FCD domain 80 210 2.3E-21 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS19510 0f54269df1b37e8cbfe661ee9598492c 230 Gene3D G3DSA:1.10.10.10 4 71 1.9E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11505 f831975c47ab3ae69da0c910714af73e 130 TIGRFAM TIGR00156 TIGR00156: TIGR00156 family protein 8 130 3.0E-41 T 28-03-2018 IPR016052 Bacteriophage 933W, L0136 CI104_RS11505 f831975c47ab3ae69da0c910714af73e 130 Pfam PF04076 Bacterial OB fold (BOF) protein 29 130 1.5E-32 T 28-03-2018 IPR005220 Bacterial OB-fold CI104_RS11505 f831975c47ab3ae69da0c910714af73e 130 Gene3D G3DSA:2.40.50.200 21 130 1.0E-19 T 28-03-2018 CI104_RS11505 f831975c47ab3ae69da0c910714af73e 130 SUPERFAMILY SSF101756 30 130 2.88E-25 T 28-03-2018 IPR005220 Bacterial OB-fold CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 17 434 3.0E-134 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 Gene3D G3DSA:3.40.47.10 7 301 1.1E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 ProSitePatterns PS00099 Thiolases active site. 417 430 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 Pfam PF02803 Thiolase, C-terminal domain 297 434 3.5E-36 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 SUPERFAMILY SSF53901 15 295 1.03E-61 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 Pfam PF00108 Thiolase, N-terminal domain 15 288 7.8E-60 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 ProSitePatterns PS00737 Thiolases signature 2. 382 398 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 TIGRFAM TIGR02446 FadI: acetyl-CoA C-acyltransferase FadI 7 436 1.5E-267 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 Gene3D G3DSA:3.40.47.10 302 433 4.4E-24 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 95 113 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 Hamap MF_01618 3-ketoacyl-CoA thiolase [fadI]. 2 436 74.206 T 28-03-2018 IPR012806 Acetyl-CoA C-acyltransferase FadI GO:0003988|GO:0005737|GO:0006631|GO:0016042 KEGG: 00062+2.3.1.16|KEGG: 00071+2.3.1.16|KEGG: 00280+2.3.1.16|KEGG: 00281+2.3.1.16|KEGG: 00362+2.3.1.16|KEGG: 00592+2.3.1.16|KEGG: 00642+2.3.1.16|MetaCyc: PWY-5136|MetaCyc: PWY-6435|MetaCyc: PWY-6863|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-6948|MetaCyc: PWY-7094|MetaCyc: PWY-7288|MetaCyc: PWY-7337|MetaCyc: PWY-7338|MetaCyc: PWY-7339|MetaCyc: PWY-7340|MetaCyc: PWY-735|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7726 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 PIRSF PIRSF000429 9 436 1.9E-126 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS17835 f6773b9abf8d7b3f4158c957d89363e4 436 SUPERFAMILY SSF53901 297 434 5.93E-33 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS22915 e2e3195047e84b5a2067adb4e10c72bb 176 SUPERFAMILY SSF49401 30 176 8.45E-34 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22915 e2e3195047e84b5a2067adb4e10c72bb 176 Gene3D G3DSA:2.60.40.1090 28 176 1.7E-30 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22915 e2e3195047e84b5a2067adb4e10c72bb 176 Pfam PF00419 Fimbrial protein 30 176 8.4E-19 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS26865 ce6ac2f8901e15c3cecb84dd2c004947 184 SUPERFAMILY SSF55729 5 175 2.66E-47 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS26865 ce6ac2f8901e15c3cecb84dd2c004947 184 Pfam PF13523 Acetyltransferase (GNAT) domain 15 161 1.0E-40 T 28-03-2018 CI104_RS26865 ce6ac2f8901e15c3cecb84dd2c004947 184 TIGRFAM TIGR04431 N6_acetyl_AAC6: aminoglycoside N(6')-acetyltransferase, AacA4 family 2 184 6.6E-115 T 28-03-2018 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type CI104_RS26865 ce6ac2f8901e15c3cecb84dd2c004947 184 Gene3D G3DSA:3.40.630.30 1 184 7.4E-33 T 28-03-2018 CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 197 219 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 Hamap MF_01667 Glyoxylate/hydroxypyruvate reductase B [ghrB]. 1 324 73.398 T 28-03-2018 IPR023756 Glyoxylate/hydroxypyruvate reductase B GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 108 287 6.8E-62 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 226 242 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 SUPERFAMILY SSF51735 100 288 3.33E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 SUPERFAMILY SSF52283 1 133 1.29E-26 T 28-03-2018 CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 319 9.5E-30 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 Gene3D G3DSA:3.40.50.720 1 113 1.0E-26 T 28-03-2018 CI104_RS00895 f628391e05e0d15b186919b1133f97b8 324 Gene3D G3DSA:3.40.50.720 114 290 9.3E-55 T 28-03-2018 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Pfam PF16331 TolA binding protein trimerisation 37 111 6.4E-24 T 28-03-2018 IPR032519 YbgF, trimerisation domain GO:0070206 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Hamap MF_02066 Cell division coordinator CpoB [cpoB]. 6 264 19.773 T 28-03-2018 IPR034706 Cell division coordinator CpoB GO:0051301 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 TIGRFAM TIGR02795 tol_pal_ybgF: tol-pal system protein YbgF 145 261 7.7E-40 T 28-03-2018 IPR014162 Cell division coordinator CpoB, C-terminal CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Gene3D G3DSA:1.25.40.10 228 264 9.5E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Gene3D G3DSA:1.25.40.10 192 227 2.8E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Gene3D G3DSA:1.25.40.10 139 191 0.0075 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 SUPERFAMILY SSF48452 141 256 2.58E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Gene3D G3DSA:1.20.5.50 35 81 1.9E-5 T 28-03-2018 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Pfam PF13174 Tetratricopeptide repeat 219 251 7.5E-7 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS08085 9bd19b2e52ad04994c64bb5763f623e6 264 Pfam PF13432 Tetratricopeptide repeat 160 215 4.0E-5 T 28-03-2018 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 Pfam PF00664 ABC transporter transmembrane region 78 287 1.4E-9 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 Gene3D G3DSA:1.20.1560.10 1 328 7.2E-33 T 28-03-2018 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 SMART SM00382 365 549 4.0E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 Gene3D G3DSA:3.40.50.300 329 571 5.1E-72 T 28-03-2018 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 TIGRFAM TIGR02868 CydC: thiol reductant ABC exporter, CydC subunit 6 533 5.3E-184 T 28-03-2018 IPR014223 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC GO:0006810|GO:0016021|GO:0042626 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 ProSitePatterns PS00211 ABC transporters family signature. 475 489 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 SUPERFAMILY SSF52540 334 569 2.66E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 Pfam PF00005 ABC transporter 356 502 2.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08895 d47a2c49aaba9e92691d47bd074292a5 573 SUPERFAMILY SSF90123 8 327 6.15E-43 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS14475 851c2d3699fcb65ba331363f3c8f7441 350 Gene3D G3DSA:3.40.50.1980 173 341 9.7E-27 T 28-03-2018 CI104_RS14475 851c2d3699fcb65ba331363f3c8f7441 350 Gene3D G3DSA:3.40.50.1980 29 172 6.6E-28 T 28-03-2018 CI104_RS14475 851c2d3699fcb65ba331363f3c8f7441 350 SUPERFAMILY SSF53807 35 338 9.03E-41 T 28-03-2018 CI104_RS14475 851c2d3699fcb65ba331363f3c8f7441 350 Pfam PF01497 Periplasmic binding protein 56 313 5.0E-38 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CI104_RS03605 c9bb91ee16ce997eb2d1fc837ebd7ca7 171 Pfam PF04985 Phage tail tube protein FII 4 170 2.9E-61 T 28-03-2018 IPR006498 Tail tube protein CI104_RS03605 c9bb91ee16ce997eb2d1fc837ebd7ca7 171 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 3 171 2.6E-52 T 28-03-2018 IPR006498 Tail tube protein CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Gene3D G3DSA:3.10.25.10 203 305 9.4E-22 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 SUPERFAMILY SSF53328 1 202 3.79E-54 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Gene3D G3DSA:3.40.50.720 314 659 4.9E-49 T 28-03-2018 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Pfam PF00551 Formyl transferase 57 176 7.8E-24 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Pfam PF02911 Formyl transferase, C-terminal domain 202 294 3.4E-18 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 SUPERFAMILY SSF50486 204 303 5.34E-22 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 PIRSF PIRSF036506 1 660 0.0 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Pfam PF01370 NAD dependent epimerase/dehydratase family 318 566 4.4E-45 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Hamap MF_01166 Bifunctional polymyxin resistance protein ArnA [arnA]. 1 660 64.885 T 28-03-2018 IPR021168 Bifunctional polymyxin resistance protein, ArnA GO:0016742|GO:0055114 KEGG: 00072+1.1.1.30|KEGG: 00520+2.1.2.13+1.1.1.305|KEGG: 00650+1.1.1.30 CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 SUPERFAMILY SSF51735 317 651 1.31E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS17410 f4d670594cf55130f7a33ea7956318c2 660 Gene3D G3DSA:3.40.50.170 1 202 3.1E-46 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 SUPERFAMILY SSF52540 3 301 3.2E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 PIRSF PIRSF006641 1 363 8.2E-158 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 TIGRFAM TIGR00092 TIGR00092: GTP-binding protein YchF 1 363 1.5E-176 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 Gene3D G3DSA:3.40.50.300 1 80 2.6E-8 T 28-03-2018 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 Hamap MF_00944 Ribosome-binding ATPase YchF [ychF]. 2 363 46.593 T 28-03-2018 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 GO:0005525 Reactome: R-HSA-114608 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 Pfam PF06071 Protein of unknown function (DUF933) 279 362 2.0E-39 T 28-03-2018 IPR013029 Domain of unknown function DUF933 Reactome: R-HSA-114608 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 SUPERFAMILY SSF81271 279 359 4.58E-36 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 Pfam PF01926 50S ribosome-binding GTPase 5 115 1.9E-21 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 26 44 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 87 105 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 5 25 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 PRINTS PR00326 GTP1/OBG GTP-binding protein family signature 70 85 2.3E-34 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 Gene3D G3DSA:1.10.150.300 110 200 9.4E-28 T 28-03-2018 IPR023192 TGS-like domain Reactome: R-HSA-114608 CI104_RS14520 f4fa51a723abe173e3e125d09ea3665a 363 Gene3D G3DSA:3.10.20.30 263 362 5.3E-46 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS28320 719a2e137904e2ccbe244f8bf000e7f0 194 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 24 188 1.6E-43 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CI104_RS28320 719a2e137904e2ccbe244f8bf000e7f0 194 TIGRFAM TIGR02747 TraV: type IV conjugative transfer system protein TraV 5 188 8.8E-33 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CI104_RS21860 6fde18e28b359a28fea998183fef004b 121 PIRSF PIRSF006113 1 120 4.1E-53 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS21860 6fde18e28b359a28fea998183fef004b 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 5 96 1.2E-32 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS21860 6fde18e28b359a28fea998183fef004b 121 Gene3D G3DSA:3.30.479.10 1 120 1.9E-40 T 28-03-2018 CI104_RS21860 6fde18e28b359a28fea998183fef004b 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 5 120 2.1E-34 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS21860 6fde18e28b359a28fea998183fef004b 121 SUPERFAMILY SSF55620 1 119 2.06E-40 T 28-03-2018 CI104_RS16320 b1ec78bcad4da30965452c7a7e6ff6d3 352 Pfam PF04143 Sulphur transport 21 331 3.3E-102 T 28-03-2018 IPR007272 Sulphur transport domain CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 SMART SM01091 492 573 8.5E-16 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 Pfam PF00999 Sodium/hydrogen exchanger family 16 388 2.6E-59 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 Pfam PF03471 Transporter associated domain 493 571 1.5E-10 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 Gene3D G3DSA:3.30.70.1450 415 487 2.1E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 Pfam PF02080 TrkA-C domain 421 483 1.7E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 Hamap MF_01075 K(+)/H(+) antiporter NhaP2 [nhaP2]. 1 576 49.695 T 28-03-2018 IPR023729 K(+)/H(+) antiporter NhaP2 GO:0005451|GO:0006812|GO:0006813|GO:0006884|GO:0016021 CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 Gene3D G3DSA:3.30.465.10 492 573 1.9E-8 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 SUPERFAMILY SSF116726 413 483 8.63E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS14620 a228e4271fd5a7729dfae04d8333b37d 578 SUPERFAMILY SSF56176 497 571 9.27E-10 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Gene3D G3DSA:4.10.860.10 182 242 2.6E-15 T 28-03-2018 IPR001943 UVR domain GO:0005515 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Pfam PF14520 Helix-hairpin-helix domain 558 609 5.4E-8 T 28-03-2018 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 TIGRFAM TIGR00194 uvrC: excinuclease ABC subunit C 9 589 2.5E-236 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Hamap MF_00203 UvrABC system protein C [uvrC]. 4 607 30.147 T 28-03-2018 IPR004791 UvrABC system, subunit C GO:0005737|GO:0006281|GO:0009380|GO:0009381 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Pfam PF01541 GIY-YIG catalytic domain 18 93 1.5E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 SUPERFAMILY SSF46600 190 243 6.41E-14 T 28-03-2018 IPR001943 UVR domain GO:0005515 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Gene3D G3DSA:1.10.150.20 526 567 0.32 T 28-03-2018 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Pfam PF08459 UvrC Helix-hairpin-helix N-terminal 386 542 2.1E-45 T 28-03-2018 IPR001162 UvrC family homology region CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 SMART SM00278 588 607 2.9 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 SMART SM00278 556 575 1.1 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 SUPERFAMILY SSF47781 521 606 5.4E-17 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Gene3D G3DSA:3.40.1440.10 4 101 4.6E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 SMART SM00465 17 98 9.7E-23 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Gene3D G3DSA:1.10.150.20 568 609 6.1E-11 T 28-03-2018 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 Pfam PF02151 UvrB/uvrC motif 205 237 2.2E-9 T 28-03-2018 IPR001943 UVR domain GO:0005515 CI104_RS15750 85a7824a64bd826dbd8f76f2319b6419 610 SUPERFAMILY SSF82771 17 100 7.59E-24 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS13190 86dad638e8432422436c8376464f910c 462 ProSitePatterns PS00570 Bacterial ring hydroxylating dioxygenases alpha-subunit signature. 92 115 - T 28-03-2018 IPR015881 Aromatic-ring-hydroxylating dioxygenase, 2Fe-2S-binding site GO:0005506|GO:0016705|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 Pfam PF00848 Ring hydroxylating alpha subunit (catalytic domain) 200 438 4.6E-18 T 28-03-2018 IPR015879 Aromatic-ring-hydroxylating dioxygenase, alpha subunit, C-terminal domain GO:0005506|GO:0016708|GO:0019439|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 Gene3D G3DSA:3.90.380.10 157 461 1.0E-70 T 28-03-2018 CI104_RS13190 86dad638e8432422436c8376464f910c 462 SUPERFAMILY SSF50022 13 168 6.55E-45 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 85 105 3.1E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 193 215 3.1E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 152 178 3.1E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 34 59 3.1E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 64 79 3.1E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 PRINTS PR00090 Ring hydroxylating dioxygenase alpha-subunit signature 106 126 3.1E-45 T 28-03-2018 IPR001663 Aromatic-ring-hydroxylating dioxygenase, alpha subunit GO:0005506|GO:0006725|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 SUPERFAMILY SSF55961 168 454 9.42E-66 T 28-03-2018 CI104_RS13190 86dad638e8432422436c8376464f910c 462 Pfam PF00355 Rieske [2Fe-2S] domain 49 132 7.4E-21 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS13190 86dad638e8432422436c8376464f910c 462 Gene3D G3DSA:2.102.10.10 47 156 1.4E-23 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS10560 d0e42e171885d880dcfc5fb340c87e0d 213 TIGRFAM TIGR00041 DTMP_kinase: dTMP kinase 2 200 7.3E-67 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CI104_RS10560 d0e42e171885d880dcfc5fb340c87e0d 213 Pfam PF02223 Thymidylate kinase 8 200 1.3E-59 T 28-03-2018 CI104_RS10560 d0e42e171885d880dcfc5fb340c87e0d 213 SUPERFAMILY SSF52540 1 209 1.41E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10560 d0e42e171885d880dcfc5fb340c87e0d 213 Gene3D G3DSA:3.40.50.300 1 209 1.1E-47 T 28-03-2018 CI104_RS10560 d0e42e171885d880dcfc5fb340c87e0d 213 ProSitePatterns PS01331 Thymidylate kinase signature. 97 109 - T 28-03-2018 IPR018095 Thymidylate kinase, conserved site GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CI104_RS10560 d0e42e171885d880dcfc5fb340c87e0d 213 Hamap MF_00165 Thymidylate kinase [tmk]. 4 208 28.764 T 28-03-2018 IPR018094 Thymidylate kinase GO:0004798|GO:0005524|GO:0006233 KEGG: 00240+2.7.4.9|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7210|Reactome: R-HSA-499943 CI104_RS11195 713c9602e015445d6f2419a39ce6effe 63 Gene3D G3DSA:1.10.1220.10 1 60 2.3E-11 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS11195 713c9602e015445d6f2419a39ce6effe 63 Pfam PF05534 HicB family 18 47 9.5E-6 T 28-03-2018 IPR008651 Uncharacterised protein family HicB CI104_RS11195 713c9602e015445d6f2419a39ce6effe 63 SUPERFAMILY SSF47598 16 57 3.5E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS21190 620f22098a64daf054185623e99a908e 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 47 58 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS21190 620f22098a64daf054185623e99a908e 287 Gene3D G3DSA:3.30.70.20 57 78 1.5E-9 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 ProSitePatterns PS01087 Radical activating enzymes signature. 19 40 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CI104_RS21190 620f22098a64daf054185623e99a908e 287 Gene3D G3DSA:3.30.70.20 30 56 9.7E-4 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 Pfam PF04055 Radical SAM superfamily 27 220 1.2E-21 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS21190 620f22098a64daf054185623e99a908e 287 PIRSF PIRSF000371 1 287 3.8E-92 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS21190 620f22098a64daf054185623e99a908e 287 Gene3D G3DSA:3.80.30.10 112 277 2.8E-24 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 Gene3D G3DSA:3.30.70.20 79 111 0.002 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 TIGRFAM TIGR04041 activase_YjjW: glycine radical enzyme activase, YjjW family 6 282 1.7E-118 T 28-03-2018 IPR023912 Putative glycyl-radical enzyme activating enzyme YjjW CI104_RS21190 620f22098a64daf054185623e99a908e 287 Pfam PF13353 4Fe-4S single cluster domain 17 140 4.4E-10 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 SUPERFAMILY SSF54862 43 129 2.51E-15 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 SUPERFAMILY SSF102114 85 250 7.65E-12 T 28-03-2018 CI104_RS21190 620f22098a64daf054185623e99a908e 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 76 87 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS16750 cac1b3a4139e6c29bc1eead98c1e798b 388 SUPERFAMILY SSF161098 176 374 3.92E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS16750 cac1b3a4139e6c29bc1eead98c1e798b 388 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 198 376 7.4E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS16750 cac1b3a4139e6c29bc1eead98c1e798b 388 Gene3D G3DSA:1.10.3720.10 8 386 1.4E-24 T 28-03-2018 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 Gene3D G3DSA:3.40.190.10 87 175 7.3E-21 T 28-03-2018 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 Gene3D G3DSA:3.40.190.10 176 264 6.2E-29 T 28-03-2018 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 Pfam PF03466 LysR substrate binding domain 89 292 3.6E-53 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 SUPERFAMILY SSF46785 1 86 1.27E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 8.5E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 Gene3D G3DSA:1.10.10.10 1 82 4.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 1.4E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23910 bab0562c0b422c3be8bcf002d823baf2 305 SUPERFAMILY SSF53850 89 296 1.71E-46 T 28-03-2018 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 Gene3D G3DSA:1.20.1090.10 160 363 1.6E-40 T 28-03-2018 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 Gene3D G3DSA:3.40.50.1970 1 159 6.9E-28 T 28-03-2018 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 SUPERFAMILY SSF56796 3 356 2.22E-82 T 28-03-2018 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 347 1.0E-64 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS01590 ec1fec1cb705fd0de2d14998528f7872 369 PIRSF PIRSF000112 1 361 7.7E-92 T 28-03-2018 CI104_RS27210 23cfb6e2ed9cd278b9ccd5a221892722 76 Gene3D G3DSA:3.40.30.10 1 76 1.6E-9 T 28-03-2018 CI104_RS27210 23cfb6e2ed9cd278b9ccd5a221892722 76 PIRSF PIRSF037031 1 76 1.4E-26 T 28-03-2018 IPR005243 Redox-active disulphide protein 2 CI104_RS27210 23cfb6e2ed9cd278b9ccd5a221892722 76 SUPERFAMILY SSF52833 1 76 3.36E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS27210 23cfb6e2ed9cd278b9ccd5a221892722 76 Pfam PF13192 Thioredoxin domain 3 76 1.1E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS06095 944806c435495f563bec239d64debcf7 63 Pfam PF16362 YaiA protein 1 62 1.9E-40 T 28-03-2018 IPR032303 YaiA protein CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 PIRSF PIRSF036427 1 236 1.3E-73 T 28-03-2018 IPR012382 Precorrin-2 C(20)-methyltransferase GO:0008757|GO:0009236|GO:0030788 CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 ProSitePatterns PS00840 Uroporphyrin-III C-methyltransferase signature 2. 94 126 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 4 210 3.2E-43 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 8 22 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 SUPERFAMILY SSF53790 1 235 7.46E-42 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 Gene3D G3DSA:3.40.1010.10 2 147 8.9E-24 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16115 90c3d72f2bfb1b1fb48bc8171d118e6d 237 TIGRFAM TIGR01467 cobI_cbiL: precorrin-2 C(20)-methyltransferase 3 231 3.4E-78 T 28-03-2018 IPR006364 Precorrin-2 C(20)-methyltransferase domain GO:0008757|GO:0009236 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 Gene3D G3DSA:1.20.1250.20 206 404 3.8E-29 T 28-03-2018 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 SUPERFAMILY SSF103473 9 202 1.31E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 SUPERFAMILY SSF103473 215 398 6.15E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 Gene3D G3DSA:1.20.1250.20 9 202 7.8E-39 T 28-03-2018 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 Hamap MF_01528 Multidrug resistance protein MdtG [mdtG]. 1 404 51.372 T 28-03-2018 IPR023692 Multidrug resistance protein MdtG GO:0005215|GO:0005886 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 Pfam PF07690 Major Facilitator Superfamily 18 261 3.5E-35 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 PRINTS PR01035 Tetracycline resistance protein signature 142 164 2.4E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 PRINTS PR01035 Tetracycline resistance protein signature 112 133 2.4E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 PRINTS PR01035 Tetracycline resistance protein signature 85 109 2.4E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 PRINTS PR01035 Tetracycline resistance protein signature 23 39 2.4E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 PRINTS PR01035 Tetracycline resistance protein signature 311 331 2.4E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS10315 8158f2283e51d7f6e905344bd96868fc 406 PRINTS PR01035 Tetracycline resistance protein signature 346 369 2.4E-12 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS23455 9a70a29f4c8d2cc1b3f2d91667608e46 212 SUPERFAMILY SSF159270 20 209 1.83E-56 T 28-03-2018 IPR023373 YmcC-like domain CI104_RS23455 9a70a29f4c8d2cc1b3f2d91667608e46 212 Pfam PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF 13 206 1.0E-62 T 28-03-2018 IPR021308 Group 4 capsule polysaccharide formation lipoprotein GfcB CI104_RS23455 9a70a29f4c8d2cc1b3f2d91667608e46 212 Gene3D G3DSA:2.40.360.10 17 212 2.5E-60 T 28-03-2018 IPR023373 YmcC-like domain CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 Gene3D G3DSA:3.40.50.300 308 620 1.2E-50 T 28-03-2018 CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 ProSitePatterns PS00211 ABC transporters family signature. 150 164 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 Pfam PF12848 ABC transporter 217 297 1.4E-28 T 28-03-2018 IPR032781 ABC-transporter extension domain CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 SUPERFAMILY SSF52540 294 516 2.21E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 ProSitePatterns PS00211 ABC transporters family signature. 431 445 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 Pfam PF00005 ABC transporter 328 459 9.7E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 Pfam PF00005 ABC transporter 17 178 5.1E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 SUPERFAMILY SSF52540 119 253 2.23E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 SUPERFAMILY SSF52540 2 92 2.23E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 SMART SM00382 337 506 2.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 SMART SM00382 26 223 4.5E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01940 5cdbf85f55d06b541277e3b11105a85b 633 Gene3D G3DSA:3.40.50.300 2 279 6.1E-53 T 28-03-2018 CI104_RS13545 38591e942ba5a0c744cc9cd6cae0e04e 447 Pfam PF07063 Domain of unknown function (DUF1338) 9 401 1.6E-118 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 CI104_RS13545 38591e942ba5a0c744cc9cd6cae0e04e 447 SMART SM01150 11 401 1.1E-223 T 28-03-2018 IPR009770 Domain of unknown function DUF1338 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Gene3D G3DSA:2.40.40.20 633 775 4.9E-27 T 28-03-2018 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Gene3D G3DSA:3.30.2070.10 530 574 3.4E-10 T 28-03-2018 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Pfam PF01568 Molydopterin dinucleotide binding domain 666 760 1.8E-19 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Pfam PF00384 Molybdopterin oxidoreductase 105 569 1.1E-65 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Gene3D G3DSA:3.40.50.740 107 196 3.1E-13 T 28-03-2018 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 513 530 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 SUPERFAMILY SSF50692 654 775 2.71E-29 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Gene3D G3DSA:3.40.228.10 197 482 3.7E-56 T 28-03-2018 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 SUPERFAMILY SSF53706 351 650 1.96E-136 T 28-03-2018 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 SUPERFAMILY SSF53706 53 293 1.96E-136 T 28-03-2018 CI104_RS06325 8d8d79ffdbc03d8a49b98f1f0721fb29 777 Gene3D G3DSA:2.20.25.90 44 106 4.2E-6 T 28-03-2018 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Gene3D G3DSA:3.40.50.620 7 41 0.14 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Hamap MF_00126 Glutamine--tRNA ligase [glnS]. 1 550 54.07 T 28-03-2018 IPR022861 Glutamine-tRNA ligase, bacterial GO:0004819 KEGG: 00970+6.1.1.18 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 34 45 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 SUPERFAMILY SSF50715 340 548 3.14E-80 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Gene3D G3DSA:2.40.240.10 344 464 6.4E-48 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Gene3D G3DSA:1.10.1160.10 261 338 2.2E-36 T 28-03-2018 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 KEGG: 00860+6.1.1.17|KEGG: 00970+6.1.1.17|MetaCyc: PWY-5188 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 TIGRFAM TIGR00440 glnS: glutamine--tRNA ligase 28 552 0.0 T 28-03-2018 IPR004514 Glutamine-tRNA synthetase GO:0000166|GO:0004819|GO:0005524|GO:0005737|GO:0006425 KEGG: 00970+6.1.1.18|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Pfam PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain 340 529 9.6E-65 T 28-03-2018 IPR020059 Glutamyl/glutaminyl-tRNA synthetase, class Ib, anti-codon binding domain GO:0000166|GO:0004812|GO:0005524|GO:0005737|GO:0006418 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 60 73 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 45 56 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 31 43 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 PRINTS PR00987 Glutamyl-tRNA synthetase signature 210 220 2.4E-9 T 28-03-2018 IPR000924 Glutamyl/glutaminyl-tRNA synthetase GO:0000166|GO:0005524|GO:0005737|GO:0016876|GO:0043039 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 SUPERFAMILY SSF52374 11 337 8.58E-104 T 28-03-2018 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Gene3D G3DSA:3.40.50.620 42 154 3.8E-38 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Gene3D G3DSA:3.40.50.620 155 260 2.2E-22 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Pfam PF00749 tRNA synthetases class I (E and Q), catalytic domain 28 337 3.3E-127 T 28-03-2018 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain GO:0005524|GO:0016876|GO:0043039 CI104_RS07710 83dfa38d6b6d9e6e4919c204c65d12b4 555 Gene3D G3DSA:2.40.240.10 465 548 7.5E-33 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS15040 9a5e02923b13a397900eeed89f30966b 120 SUPERFAMILY SSF51197 1 106 6.73E-34 T 28-03-2018 CI104_RS15040 9a5e02923b13a397900eeed89f30966b 120 Gene3D G3DSA:2.60.120.10 5 109 1.4E-34 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS15040 9a5e02923b13a397900eeed89f30966b 120 PIRSF PIRSF020632 1 120 2.2E-52 T 28-03-2018 IPR014510 Tellurite resistance predicted, YeaR CI104_RS15040 9a5e02923b13a397900eeed89f30966b 120 Pfam PF09313 Domain of unknown function (DUF1971) 12 96 9.3E-24 T 28-03-2018 IPR015392 Domain of unknown function DUF1971 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 SUPERFAMILY SSF101904 533 850 6.28E-112 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Hamap MF_01897 DNA gyrase subunit A [gyrA]. 1 841 24.678 T 28-03-2018 IPR005743 DNA gyrase, subunit A GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 32 506 1.3E-154 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 538 584 9.2E-10 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 692 737 1.5E-15 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 645 688 2.7E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 793 839 5.8E-13 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 744 789 3.9E-14 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 588 637 3.5E-11 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Gene3D G3DSA:2.120.10.90 533 856 8.8E-135 T 28-03-2018 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 SMART SM00434 11 499 0.0 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Gene3D G3DSA:1.10.268.10 376 497 1.7E-50 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 TIGRFAM TIGR01063 gyrA: DNA gyrase, A subunit 8 840 0.0 T 28-03-2018 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Gene3D G3DSA:3.90.199.10 285 375 3.4E-9 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 Gene3D G3DSA:3.90.199.10 34 284 9.3E-116 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CI104_RS17300 120f7ae138ace09bf5c458a652f42550 878 SUPERFAMILY SSF56719 30 521 1.24E-183 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 Pfam PF01566 Natural resistance-associated macrophage protein 38 383 8.4E-126 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 Hamap MF_00221 Divalent metal cation transporter MntH [mntH]. 1 409 38.123 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 TIGRFAM TIGR01197 nramp: metal ion transporter, metal ion (Mn2+/Fe2+) transporter (Nramp) family 19 377 1.0E-98 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 299 318 6.4E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 150 171 6.4E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 97 123 6.4E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 125 144 6.4E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS18005 66ac80d89282cf0f06d8cfd1fc2680d9 412 PRINTS PR00447 Natural resistance-associated macrophage protein signature 200 223 6.4E-30 T 28-03-2018 IPR001046 NRAMP family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-425410 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-35 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 SUPERFAMILY SSF55347 150 314 1.37E-61 T 28-03-2018 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 266 281 2.7E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 2.7E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 2.7E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 2.7E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 2.7E-32 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 PIRSF PIRSF000149 1 333 1.3E-118 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 3 325 5.5E-134 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 Gene3D G3DSA:3.40.50.720 1 159 3.5E-71 T 28-03-2018 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 SMART SM00846 2 150 5.2E-83 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 Gene3D G3DSA:3.30.360.10 160 315 6.4E-60 T 28-03-2018 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 313 1.9E-60 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS13600 8fce8dd5bbb283d61fcc34c3416923e7 333 SUPERFAMILY SSF51735 3 166 1.43E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 Gene3D G3DSA:2.60.120.10 5 161 1.6E-51 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 Gene3D G3DSA:2.60.120.10 294 391 3.3E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PIRSF PIRSF001480 1 391 6.2E-110 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 ProSitePatterns PS00966 Phosphomannose isomerase type I signature 2. 255 280 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 Pfam PF01238 Phosphomannose isomerase type I 1 356 7.9E-115 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 TIGRFAM TIGR00218 manA: mannose-6-phosphate isomerase, class I 3 381 2.0E-132 T 28-03-2018 IPR001250 Mannose-6-phosphate isomerase, type I GO:0004476|GO:0005975|GO:0008270 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 SUPERFAMILY SSF51182 1 374 3.77E-100 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 4 22 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 255 274 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 274 293 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 81 102 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 220 235 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 32 47 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 126 149 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 PRINTS PR00714 Phosphomannose isomerase type I signature 236 255 2.1E-73 T 28-03-2018 IPR016305 Mannose-6-phosphate isomerase GO:0004476|GO:0009298 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 Gene3D G3DSA:1.10.441.10 162 262 2.1E-29 T 28-03-2018 CI104_RS12570 1ca887e2f6fe47ea9e4b88c49d4116d4 391 ProSitePatterns PS00965 Phosphomannose isomerase type I signature 1. 126 134 - T 28-03-2018 IPR018050 Phosphomannose isomerase, type I, conserved site GO:0004476 KEGG: 00051+5.3.1.8|KEGG: 00520+5.3.1.8|MetaCyc: PWY-3861|MetaCyc: PWY-3881|MetaCyc: PWY-5659|MetaCyc: PWY-6992|MetaCyc: PWY-7456|MetaCyc: PWY-7586|MetaCyc: PWY-882|Reactome: R-HSA-446205 CI104_RS13975 a1eb71688b947aecc98e10fcde8f5bea 74 Pfam PF09584 Phage shock protein PspD (Phageshock_PspD) 11 71 2.2E-31 T 28-03-2018 IPR014321 Phage shock protein, PspD CI104_RS13975 a1eb71688b947aecc98e10fcde8f5bea 74 TIGRFAM TIGR02979 phageshock_pspD: phage shock protein PspD 13 71 2.3E-32 T 28-03-2018 IPR014321 Phage shock protein, PspD CI104_RS00425 d7a9c73749da7c2118dbe72fcd86abe8 520 SUPERFAMILY SSF55604 446 516 8.24E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS00425 d7a9c73749da7c2118dbe72fcd86abe8 520 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 411 503 2.2E-20 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS00425 d7a9c73749da7c2118dbe72fcd86abe8 520 Pfam PF00367 phosphotransferase system, EIIB 447 479 6.1E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS00425 d7a9c73749da7c2118dbe72fcd86abe8 520 Gene3D G3DSA:3.30.1360.60 442 517 4.0E-24 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS00425 d7a9c73749da7c2118dbe72fcd86abe8 520 Pfam PF02378 Phosphotransferase system, EIIC 17 350 3.5E-58 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS23305 1ec0fa4aca12894dd76d9cf92d4a3c3e 143 PRINTS PR01438 Universal stress protein signature 104 116 3.9E-9 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS23305 1ec0fa4aca12894dd76d9cf92d4a3c3e 143 PRINTS PR01438 Universal stress protein signature 121 143 3.9E-9 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS23305 1ec0fa4aca12894dd76d9cf92d4a3c3e 143 Pfam PF00582 Universal stress protein family 1 143 2.5E-23 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS23305 1ec0fa4aca12894dd76d9cf92d4a3c3e 143 SUPERFAMILY SSF52402 5 143 1.26E-24 T 28-03-2018 CI104_RS23305 1ec0fa4aca12894dd76d9cf92d4a3c3e 143 Gene3D G3DSA:3.40.50.620 2 143 3.9E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 13 35 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 SUPERFAMILY SSF53597 1 159 1.7E-55 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 PIRSF PIRSF000194 1 159 2.0E-57 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 Pfam PF00186 Dihydrofolate reductase 1 158 1.7E-58 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 Gene3D G3DSA:3.40.430.10 1 159 1.5E-52 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 PRINTS PR00070 Dihydrofolate reductase signature 27 35 9.8E-15 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 PRINTS PR00070 Dihydrofolate reductase signature 40 51 9.8E-15 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 PRINTS PR00070 Dihydrofolate reductase signature 90 104 9.8E-15 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS04705 35cfaf158bb0b799310c95102189f253 159 PRINTS PR00070 Dihydrofolate reductase signature 13 23 9.8E-15 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS00915 34495591104cf47fbc56801001b21dda 338 Gene3D G3DSA:3.40.50.2300 61 171 1.2E-31 T 28-03-2018 CI104_RS00915 34495591104cf47fbc56801001b21dda 338 SUPERFAMILY SSF47413 6 65 2.19E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS00915 34495591104cf47fbc56801001b21dda 338 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 67 316 5.4E-21 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS00915 34495591104cf47fbc56801001b21dda 338 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 54 1.2E-8 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS00915 34495591104cf47fbc56801001b21dda 338 Gene3D G3DSA:1.10.260.40 5 60 3.9E-15 T 28-03-2018 CI104_RS00915 34495591104cf47fbc56801001b21dda 338 Gene3D G3DSA:3.40.50.2300 172 338 9.0E-32 T 28-03-2018 CI104_RS00915 34495591104cf47fbc56801001b21dda 338 SUPERFAMILY SSF53822 64 320 5.1E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS00915 34495591104cf47fbc56801001b21dda 338 SMART SM00354 6 77 7.4E-22 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 Gene3D G3DSA:3.40.50.720 148 328 4.5E-31 T 28-03-2018 CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 132 5.2E-34 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 Gene3D G3DSA:3.90.180.10 1 147 1.5E-45 T 28-03-2018 CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 Pfam PF00107 Zinc-binding dehydrogenase 173 300 1.5E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 SUPERFAMILY SSF50129 3 172 3.3E-50 T 28-03-2018 IPR011032 GroES-like CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 SUPERFAMILY SSF51735 140 306 2.8E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21335 230a60f2e7b0936019ede4355ba670df 340 SMART SM00829 10 338 0.002 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS10345 3a29acb62e22cf395399918b7ce30a52 37 Pfam PF10968 Protein of unknown function (DUF2770) 1 36 8.6E-19 T 28-03-2018 IPR024494 Protein of unknown function DUF2770 CI104_RS10345 3a29acb62e22cf395399918b7ce30a52 37 ProDom PD049682 YCEO INNER MEMBRANE STY1197 1 37 1.0E-9 T 28-03-2018 IPR024494 Protein of unknown function DUF2770 CI104_RS27940 e0503190ddad7bc3105129a1358503c5 402 SUPERFAMILY SSF52980 178 395 7.51E-83 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS27940 e0503190ddad7bc3105129a1358503c5 402 Pfam PF09019 EcoRII C terminal 227 391 1.4E-72 T 28-03-2018 IPR015109 Restriction endonuclease, type II, EcoRII, C-terminal GO:0003677|GO:0009036|GO:0009307 CI104_RS27940 e0503190ddad7bc3105129a1358503c5 402 Gene3D G3DSA:2.40.330.10 1 175 6.5E-38 T 28-03-2018 IPR015300 DNA-binding pseudobarrel domain CI104_RS27940 e0503190ddad7bc3105129a1358503c5 402 SUPERFAMILY SSF101936 3 174 1.33E-61 T 28-03-2018 IPR015300 DNA-binding pseudobarrel domain CI104_RS27940 e0503190ddad7bc3105129a1358503c5 402 Pfam PF09217 Restriction endonuclease EcoRII, N-terminal 14 163 4.6E-65 T 28-03-2018 IPR023372 Restriction endonuclease, type II, EcoRII, N-terminal CI104_RS15835 2ea72475ebc0839cadfb9e8514f9cc80 77 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 10 34 - T 28-03-2018 IPR001455 TusA-like domain CI104_RS15835 2ea72475ebc0839cadfb9e8514f9cc80 77 SUPERFAMILY SSF64307 4 77 5.76E-24 T 28-03-2018 IPR001455 TusA-like domain CI104_RS15835 2ea72475ebc0839cadfb9e8514f9cc80 77 Pfam PF01206 Sulfurtransferase TusA 9 77 1.6E-19 T 28-03-2018 IPR001455 TusA-like domain CI104_RS15835 2ea72475ebc0839cadfb9e8514f9cc80 77 Gene3D G3DSA:3.30.110.40 5 77 5.9E-22 T 28-03-2018 IPR001455 TusA-like domain CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 PRINTS PR00419 Adrenodoxin reductase family signature 683 697 2.1E-15 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 PRINTS PR00419 Adrenodoxin reductase family signature 554 576 2.1E-15 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 PRINTS PR00419 Adrenodoxin reductase family signature 577 590 2.1E-15 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 SUPERFAMILY SSF51971 553 788 2.3E-48 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 TIGRFAM TIGR03315 Se_ygfK: putative selenate reductase, YgfK subunit 2 1029 0.0 T 28-03-2018 IPR017701 Putative selenate reductase YgfK CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 940 951 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 SUPERFAMILY SSF46548 875 967 9.94E-10 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Gene3D G3DSA:3.20.20.70 43 410 9.1E-10 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 456 535 4.0E-16 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 SUPERFAMILY SSF46548 396 563 3.61E-19 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 554 842 1.7E-43 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Gene3D G3DSA:1.10.1060.10 411 551 2.6E-25 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Gene3D G3DSA:1.10.1060.10 857 966 6.7E-10 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 SUPERFAMILY SSF51395 207 259 1.02E-13 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 SUPERFAMILY SSF51395 43 145 1.02E-13 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 SUPERFAMILY SSF51395 289 408 1.02E-13 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Gene3D G3DSA:3.40.50.720 552 643 9.3E-15 T 28-03-2018 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Gene3D G3DSA:3.50.50.60 697 856 1.5E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS20945 9a850346906a0242bfec1f9394835d90 1034 Gene3D G3DSA:3.50.50.60 644 696 2.6E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 311 489 5.2E-59 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 SUPERFAMILY SSF48179 613 706 1.53E-25 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Gene3D G3DSA:1.10.1040.10 491 591 2.3E-24 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 SUPERFAMILY SSF51735 309 489 1.97E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 TIGRFAM TIGR02440 FadJ: fatty oxidation complex, alpha subunit FadJ 6 706 0.0 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 492 586 2.5E-27 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 489 513 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 105 125 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Gene3D G3DSA:3.90.226.10 2 205 3.1E-59 T 28-03-2018 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Gene3D G3DSA:3.40.50.720 252 490 2.3E-54 T 28-03-2018 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Gene3D G3DSA:1.10.1040.10 616 710 3.1E-18 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 SUPERFAMILY SSF48179 492 595 9.35E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Hamap MF_01617 Fatty acid oxidation complex subunit alpha [fadJ]. 1 706 53.245 T 28-03-2018 IPR012802 Fatty oxidation complex, alpha subunit FadJ GO:0003857|GO:0004300|GO:0006635|GO:0008692|GO:0051287|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 Pfam PF00378 Enoyl-CoA hydratase/isomerase 15 204 2.1E-45 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CI104_RS17830 0691e62b1cf6bf37337024f227d96bfa 719 SUPERFAMILY SSF52096 6 298 1.16E-69 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS25470 55c7233699e660949fa828d0ad4ea90e 668 Gene3D G3DSA:3.40.50.410 490 647 2.3E-14 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS25470 55c7233699e660949fa828d0ad4ea90e 668 Pfam PF00092 von Willebrand factor type A domain 558 636 1.7E-8 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS25470 55c7233699e660949fa828d0ad4ea90e 668 SMART SM00327 497 667 8.9E-4 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS25470 55c7233699e660949fa828d0ad4ea90e 668 SUPERFAMILY SSF53300 500 637 1.48E-15 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 PIRSF PIRSF006278 2 328 2.5E-93 T 28-03-2018 IPR027278 1-aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 Gene3D G3DSA:3.40.50.1100 50 143 2.0E-30 T 28-03-2018 CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 TIGRFAM TIGR01275 ACC_deam_rel: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family 12 328 7.5E-142 T 28-03-2018 IPR005966 D-cysteine desulfhydrase GO:0003824 KEGG: 00270+4.4.1.15 CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 Hamap MF_01045 D-cysteine desulfhydrase [dcyD]. 1 328 76.821 T 28-03-2018 IPR023702 D-cysteine desulphhydrase, bacterial GO:0019148 KEGG: 00270+4.4.1.15 CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 Gene3D G3DSA:3.40.50.1100 144 320 8.7E-28 T 28-03-2018 CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 16 316 1.3E-54 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS15780 c485b56c2978c71c6ba33302a6cb0544 328 SUPERFAMILY SSF53686 7 326 1.14E-85 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS22895 c339bc4090bec7947f62c5d061154332 207 Pfam PF00419 Fimbrial protein 44 206 2.1E-12 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22895 c339bc4090bec7947f62c5d061154332 207 SUPERFAMILY SSF49401 42 206 6.46E-29 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22895 c339bc4090bec7947f62c5d061154332 207 Gene3D G3DSA:2.60.40.1090 41 207 3.3E-27 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Pfam PF02954 Bacterial regulatory protein, Fis family 501 531 2.8E-9 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Gene3D G3DSA:1.10.8.60 403 486 3.0E-15 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Gene3D G3DSA:3.40.50.10660 101 179 9.3E-24 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 SUPERFAMILY SSF52540 220 464 4.05E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Gene3D G3DSA:3.40.50.300 221 402 3.3E-24 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 447 456 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 TIGRFAM TIGR02329 propionate_PrpR: propionate catabolism operon regulatory protein PrpR 11 530 1.4E-249 T 28-03-2018 IPR012704 Signal transduction response regulator, propionate catabolism, transcriptional regulator PrpR GO:0000156|GO:0000160|GO:0003677|GO:0005524|GO:0005737|GO:0019629 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 SUPERFAMILY SSF159800 15 198 8.24E-52 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Pfam PF00158 Sigma-54 interaction domain 222 396 2.0E-63 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 SMART SM00382 241 398 4.0E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Gene3D G3DSA:1.20.5.170 181 220 1.1E-18 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Gene3D G3DSA:3.40.50.2300 2 100 2.4E-23 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Pfam PF06506 Propionate catabolism activator 39 201 1.1E-49 T 28-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 Gene3D G3DSA:1.10.10.60 498 531 9.2E-10 T 28-03-2018 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 316 331 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS05885 93a373bb5ca5bce65c769425e003fa53 531 SUPERFAMILY SSF46689 447 531 1.91E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12550 a983d915d72e2bf5bcb118ee924edfa6 390 Pfam PF00155 Aminotransferase class I and II 30 380 5.7E-57 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS12550 a983d915d72e2bf5bcb118ee924edfa6 390 Gene3D G3DSA:3.90.1150.10 271 390 5.1E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS12550 a983d915d72e2bf5bcb118ee924edfa6 390 Gene3D G3DSA:3.40.640.10 42 270 1.4E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS12550 a983d915d72e2bf5bcb118ee924edfa6 390 SUPERFAMILY SSF53383 1 388 3.67E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS12550 a983d915d72e2bf5bcb118ee924edfa6 390 TIGRFAM TIGR04350 C_S_lyase_PatB: putative C-S lyase 4 386 9.7E-118 T 28-03-2018 IPR027619 Putative C-S lyase KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CI104_RS18250 93371878070d5058c69d11492e5a5908 467 Gene3D G3DSA:3.30.420.40 2 110 0.12 T 28-03-2018 CI104_RS18250 93371878070d5058c69d11492e5a5908 467 Gene3D G3DSA:3.30.420.150 127 328 1.0E-8 T 28-03-2018 CI104_RS18250 93371878070d5058c69d11492e5a5908 467 SUPERFAMILY SSF53067 8 274 2.16E-9 T 28-03-2018 CI104_RS18250 93371878070d5058c69d11492e5a5908 467 Pfam PF06277 Ethanolamine utilisation protein EutA 5 465 4.2E-177 T 28-03-2018 IPR009377 Ethanolamine utilisation EutA CI104_RS18250 93371878070d5058c69d11492e5a5908 467 PIRSF PIRSF012293 2 467 1.7E-206 T 28-03-2018 IPR009377 Ethanolamine utilisation EutA CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 SUPERFAMILY SSF55205 1 423 2.09E-145 T 28-03-2018 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta GO:0003824 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 Gene3D G3DSA:3.65.10.10 229 425 6.4E-68 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 PIRSF PIRSF000505 1 427 1.9E-153 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 Pfam PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) 7 420 3.6E-153 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 Hamap MF_00210 3-phosphoshikimate 1-carboxyvinyltransferase [aroA]. 10 426 35.392 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 TIGRFAM TIGR01356 aroA: 3-phosphoshikimate 1-carboxyvinyltransferase 14 423 1.3E-140 T 28-03-2018 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase GO:0003866|GO:0009073 KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 Gene3D G3DSA:3.65.10.10 21 228 2.0E-64 T 28-03-2018 IPR001986 Enolpyruvate transferase domain GO:0016765 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 ProSitePatterns PS00104 EPSP synthase signature 1. 90 104 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CI104_RS09030 31ad8d8e1ef63fda0b4235e80b336d6e 427 ProSitePatterns PS00885 EPSP synthase signature 2. 338 356 - T 28-03-2018 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site KEGG: 00400+2.5.1.19|MetaCyc: PWY-6163 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Pfam PF02780 Transketolase, C-terminal domain 495 611 2.9E-27 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 ProSitePatterns PS00801 Transketolase signature 1. 36 55 - T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 SMART SM00861 319 484 6.6E-68 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 TIGRFAM TIGR00204 dxs: 1-deoxy-D-xylulose-5-phosphate synthase 11 620 0.0 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 SUPERFAMILY SSF52518 317 504 3.72E-58 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Pfam PF13292 1-deoxy-D-xylulose-5-phosphate synthase 12 282 2.2E-116 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 SUPERFAMILY SSF52518 10 199 6.79E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 SUPERFAMILY SSF52518 243 381 6.79E-76 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Gene3D G3DSA:3.40.50.970 297 487 1.4E-62 T 28-03-2018 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Hamap MF_00315 1-deoxy-D-xylulose-5-phosphate synthase [dxs]. 10 620 46.618 T 28-03-2018 IPR005477 Deoxyxylulose-5-phosphate synthase GO:0008661|GO:0016114 KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Pfam PF02779 Transketolase, pyrimidine binding domain 320 480 1.6E-39 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Gene3D G3DSA:3.40.50.970 3 296 3.3E-75 T 28-03-2018 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 Gene3D G3DSA:3.40.50.920 495 620 2.6E-35 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 SUPERFAMILY SSF52922 491 619 8.64E-33 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS06300 5685b6a10278e78b407d095660dff9dd 620 ProSitePatterns PS00802 Transketolase signature 2. 425 441 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 Gene3D G3DSA:2.115.10.20 1 349 5.8E-101 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 ProSitePatterns PS00609 Glycosyl hydrolases family 32 active site. 29 42 - T 28-03-2018 IPR018053 Glycoside hydrolase, family 32, active site GO:0004553|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 Pfam PF00251 Glycosyl hydrolases family 32 N-terminal domain 29 330 9.7E-100 T 28-03-2018 IPR013148 Glycosyl hydrolase family 32, N-terminal CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 TIGRFAM TIGR01322 scrB_fam: sucrose-6-phosphate hydrolase 20 451 1.2E-140 T 28-03-2018 IPR006232 Sucrose-6-phosphate hydrolase GO:0004564|GO:0005737|GO:0005975 KEGG: 00052+3.2.1.26|KEGG: 00500+3.2.1.26 CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 SUPERFAMILY SSF49899 331 470 4.51E-27 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 Gene3D G3DSA:2.60.120.560 350 476 5.1E-24 T 28-03-2018 CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 SMART SM00640 29 440 1.1E-144 T 28-03-2018 IPR001362 Glycoside hydrolase, family 32 GO:0004553|GO:0005975 CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 SUPERFAMILY SSF75005 22 331 8.95E-108 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS22250 b387d3ae7946ff1fc1dfea7230faad5a 477 Pfam PF08244 Glycosyl hydrolases family 32 C terminal 351 468 7.4E-22 T 28-03-2018 IPR013189 Glycosyl hydrolase family 32, C-terminal CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 SUPERFAMILY SSF48179 168 289 5.44E-39 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 Gene3D G3DSA:1.10.1040.10 168 296 5.4E-39 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 Pfam PF02558 Ketopantoate reductase PanE/ApbA 3 143 1.7E-25 T 28-03-2018 IPR013332 Ketopantoate reductase, N-terminal domain GO:0008677|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 Pfam PF08546 Ketopantoate reductase PanE/ApbA C terminal 168 289 1.9E-37 T 28-03-2018 IPR013752 Ketopantoate reductase, C-terminal domain GO:0016491|GO:0050661|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 SUPERFAMILY SSF51735 1 167 5.67E-59 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 TIGRFAM TIGR00745 apbA_panE: 2-dehydropantoate 2-reductase 2 291 1.0E-76 T 28-03-2018 IPR003710 Ketopantoate reductase ApbA/PanE GO:0005737|GO:0015940|GO:0016491|GO:0055114 KEGG: 00052+1.1.1.16|KEGG: 00770+1.1.1.169|MetaCyc: PWY-6654|MetaCyc: PWY-7862 CI104_RS06345 c398b348fea6312c2fa75c75af4d241f 303 Gene3D G3DSA:3.40.50.720 1 167 6.8E-24 T 28-03-2018 CI104_RS05815 23414c654718681e5c3b6eedba0343d0 297 SUPERFAMILY SSF89550 182 271 3.01E-37 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS05815 23414c654718681e5c3b6eedba0343d0 297 SUPERFAMILY SSF89550 1 83 3.01E-37 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS05815 23414c654718681e5c3b6eedba0343d0 297 Pfam PF02811 PHP domain 5 110 1.2E-10 T 28-03-2018 IPR004013 PHP domain GO:0003824 CI104_RS05815 23414c654718681e5c3b6eedba0343d0 297 Gene3D G3DSA:3.20.20.140 1 276 3.9E-38 T 28-03-2018 CI104_RS05815 23414c654718681e5c3b6eedba0343d0 297 SMART SM00481 4 70 3.0E-12 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CI104_RS18475 9d32d03579fdd7793258d2024beb634a 212 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 133 156 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS18475 9d32d03579fdd7793258d2024beb634a 212 SUPERFAMILY SSF53328 1 205 1.19E-65 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS18475 9d32d03579fdd7793258d2024beb634a 212 Pfam PF00551 Formyl transferase 1 181 5.1E-66 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS18475 9d32d03579fdd7793258d2024beb634a 212 Gene3D G3DSA:3.40.50.170 1 198 3.6E-68 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS18475 9d32d03579fdd7793258d2024beb634a 212 TIGRFAM TIGR00639 PurN: phosphoribosylglycinamide formyltransferase 1 191 5.1E-83 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CI104_RS18475 9d32d03579fdd7793258d2024beb634a 212 Hamap MF_01930 Phosphoribosylglycinamide formyltransferase [purN]. 2 187 31.486 T 28-03-2018 IPR004607 Phosphoribosylglycinamide formyltransferase GO:0004644|GO:0006189 KEGG: 00230+2.1.2.2|KEGG: 00670+2.1.2.2|MetaCyc: PWY-6121|MetaCyc: PWY-6613|Reactome: R-HSA-73817 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 Gene3D G3DSA:1.10.150.20 174 251 1.5E-23 T 28-03-2018 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 Pfam PF01367 5'-3' exonuclease, C-terminal SAM fold 160 249 4.5E-25 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 SUPERFAMILY SSF47807 160 243 4.04E-23 T 28-03-2018 IPR020045 5'-3' exonuclease, C-terminal domain GO:0003677|GO:0003824 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 SUPERFAMILY SSF88723 4 159 6.28E-38 T 28-03-2018 IPR029060 PIN domain-like CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 Hamap MF_01192 Flap endonuclease Xni [xni]. 2 251 46.155 T 28-03-2018 IPR022895 Flap endonuclease Xni GO:0048256 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 Gene3D G3DSA:3.40.50.1010 3 173 7.7E-40 T 28-03-2018 IPR029060 PIN domain-like CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 SMART SM00475 3 250 1.0E-104 T 28-03-2018 IPR002421 5'-3' exonuclease, N-terminal GO:0003677 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 Pfam PF02739 5'-3' exonuclease, N-terminal resolvase-like domain 4 154 4.3E-28 T 28-03-2018 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal GO:0003677 CI104_RS20130 dc63291d1191694317f04dfc3c36f280 251 SMART SM00279 162 197 6.0E-11 T 28-03-2018 IPR008918 Helix-hairpin-helix motif, class 2 GO:0003677|GO:0003824 CI104_RS25645 3fa27b19c2aaf58034fa6b6460a61e7f 166 Gene3D G3DSA:3.40.630.30 1 96 2.6E-13 T 28-03-2018 CI104_RS25645 3fa27b19c2aaf58034fa6b6460a61e7f 166 Pfam PF00583 Acetyltransferase (GNAT) family 31 143 3.3E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS25645 3fa27b19c2aaf58034fa6b6460a61e7f 166 SUPERFAMILY SSF55729 9 155 1.36E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS25645 3fa27b19c2aaf58034fa6b6460a61e7f 166 Gene3D G3DSA:3.40.630.30 97 154 8.1E-14 T 28-03-2018 CI104_RS19170 3fa27b19c2aaf58034fa6b6460a61e7f 166 Gene3D G3DSA:3.40.630.30 1 96 2.6E-13 T 28-03-2018 CI104_RS19170 3fa27b19c2aaf58034fa6b6460a61e7f 166 Pfam PF00583 Acetyltransferase (GNAT) family 31 143 3.3E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS19170 3fa27b19c2aaf58034fa6b6460a61e7f 166 SUPERFAMILY SSF55729 9 155 1.36E-26 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS19170 3fa27b19c2aaf58034fa6b6460a61e7f 166 Gene3D G3DSA:3.40.630.30 97 154 8.1E-14 T 28-03-2018 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 Pfam PF01409 tRNA synthetases class II core domain (F) 92 326 4.0E-107 T 28-03-2018 IPR002319 Phenylalanyl-tRNA synthetase GO:0000049|GO:0004812|GO:0005524|GO:0005737|GO:0043039 KEGG: 00970+6.1.1.20 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 Hamap MF_00281 Phenylalanine--tRNA ligase alpha subunit [pheS]. 8 326 49.939 T 28-03-2018 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 Gene3D G3DSA:3.30.930.10 7 327 8.9E-91 T 28-03-2018 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 SUPERFAMILY SSF55681 92 327 3.08E-81 T 28-03-2018 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 TIGRFAM TIGR00468 pheS: phenylalanine--tRNA ligase, alpha subunit 38 327 4.3E-119 T 28-03-2018 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20|Reactome: R-HSA-379716 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 Pfam PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain 20 87 1.6E-26 T 28-03-2018 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal GO:0000166|GO:0004826|GO:0005524|GO:0005737|GO:0006432 KEGG: 00970+6.1.1.20 CI104_RS11955 65b5119538a9ced737473cf83e086bd4 327 SUPERFAMILY SSF46589 14 99 1.67E-22 T 28-03-2018 IPR010978 tRNA-binding arm GO:0000166 CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 Gene3D G3DSA:1.20.120.530 84 229 3.1E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 SMART SM00895 97 220 2.3E-16 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 68 1.3E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 Gene3D G3DSA:1.10.10.10 2 70 3.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 SUPERFAMILY SSF48008 98 227 2.14E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 SUPERFAMILY SSF46785 4 72 1.86E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 4.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 4.5E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 Pfam PF07729 FCD domain 99 218 2.5E-24 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS00030 2bb6f5c663e00fe596cfb5a053ae5c16 229 SMART SM00345 9 68 3.0E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS23160 b22cace15c761070ad6f1b11fb302ef7 206 Gene3D G3DSA:1.25.40.10 123 202 3.5E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS23160 b22cace15c761070ad6f1b11fb302ef7 206 SMART SM00028 81 114 0.0015 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS23160 b22cace15c761070ad6f1b11fb302ef7 206 SMART SM00028 152 185 40.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS23160 b22cace15c761070ad6f1b11fb302ef7 206 SUPERFAMILY SSF48452 71 183 3.8E-16 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS23160 b22cace15c761070ad6f1b11fb302ef7 206 Gene3D G3DSA:1.25.40.10 67 122 2.8E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 Gene3D G3DSA:1.20.58.180 216 294 2.6E-32 T 28-03-2018 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 TIGRFAM TIGR00388 glyQ: glycine--tRNA ligase, alpha subunit 7 301 4.1E-177 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 Hamap MF_00254 Glycine--tRNA ligase alpha subunit [glyQ]. 7 293 62.594 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 113 137 4.6E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 253 269 4.6E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 61 76 4.6E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 139 159 4.6E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 82 102 4.6E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 PRINTS PR01044 Glycyl-tRNA synthetase alpha subunit signature 162 177 4.6E-71 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 Gene3D G3DSA:3.30.930.10 1 214 5.9E-87 T 28-03-2018 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 SUPERFAMILY SSF55681 8 292 1.06E-133 T 28-03-2018 CI104_RS00860 3778b04d2598c5a81d77bea673ab64d9 303 Pfam PF02091 Glycyl-tRNA synthetase alpha subunit 9 292 8.3E-150 T 28-03-2018 IPR002310 Glycine-tRNA ligase, alpha subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS08450 3150969dd57f104e4c90efaa6fddb91c 240 Pfam PF00005 ABC transporter 17 165 1.6E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08450 3150969dd57f104e4c90efaa6fddb91c 240 SMART SM00382 26 213 2.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08450 3150969dd57f104e4c90efaa6fddb91c 240 Gene3D G3DSA:3.40.50.300 1 240 1.7E-76 T 28-03-2018 CI104_RS08450 3150969dd57f104e4c90efaa6fddb91c 240 PIRSF PIRSF039085 1 240 1.9E-110 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS08450 3150969dd57f104e4c90efaa6fddb91c 240 SUPERFAMILY SSF52540 1 235 1.95E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08450 3150969dd57f104e4c90efaa6fddb91c 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS19000 7cdd14a0fd3a8cffdeb086f462079528 160 Gene3D G3DSA:3.30.1330.60 23 160 7.3E-30 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS19000 7cdd14a0fd3a8cffdeb086f462079528 160 PRINTS PR01021 OMPA domain signature 86 101 9.7E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS19000 7cdd14a0fd3a8cffdeb086f462079528 160 PRINTS PR01021 OMPA domain signature 101 117 9.7E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS19000 7cdd14a0fd3a8cffdeb086f462079528 160 PRINTS PR01021 OMPA domain signature 56 78 9.7E-12 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS19000 7cdd14a0fd3a8cffdeb086f462079528 160 Pfam PF00691 OmpA family 55 151 4.9E-18 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS19000 7cdd14a0fd3a8cffdeb086f462079528 160 SUPERFAMILY SSF103088 45 157 1.96E-28 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS18460 2966a9af8d66b8ec3b0aa8f37a19dec0 208 Hamap MF_01218_B Uracil phosphoribosyltransferase [upp]. 2 208 44.247 T 28-03-2018 IPR034332 Uracil phosphoribosyltransferase, bacterial-type KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CI104_RS18460 2966a9af8d66b8ec3b0aa8f37a19dec0 208 Pfam PF14681 Uracil phosphoribosyltransferase 7 207 5.8E-65 T 28-03-2018 CI104_RS18460 2966a9af8d66b8ec3b0aa8f37a19dec0 208 TIGRFAM TIGR01091 upp: uracil phosphoribosyltransferase 3 208 4.0E-89 T 28-03-2018 IPR005765 Uracil phosphoribosyl transferase GO:0004845|GO:0006223 KEGG: 00240+2.4.2.9|MetaCyc: PWY-7183 CI104_RS18460 2966a9af8d66b8ec3b0aa8f37a19dec0 208 Gene3D G3DSA:3.40.50.2020 1 206 1.3E-58 T 28-03-2018 CI104_RS18460 2966a9af8d66b8ec3b0aa8f37a19dec0 208 SUPERFAMILY SSF53271 4 206 5.77E-65 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 Gene3D G3DSA:3.30.70.100 985 1079 1.0E-11 T 28-03-2018 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 Pfam PF12795 Mechanosensitive ion channel porin domain 31 255 4.6E-58 T 28-03-2018 IPR024393 Mechanosensitive ion channel MscS, porin domain CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 SUPERFAMILY SSF82689 985 1083 5.89E-16 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 Gene3D G3DSA:2.30.30.60 933 982 2.0E-12 T 28-03-2018 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 Pfam PF00924 Mechanosensitive ion channel 875 1074 1.7E-53 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 SUPERFAMILY SSF82861 834 916 2.62E-8 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 Gene3D G3DSA:1.20.5.110 25 800 1.8E-6 T 28-03-2018 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 947 981 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 SUPERFAMILY SSF50182 918 983 7.52E-17 T 28-03-2018 IPR010920 LSM domain CI104_RS22600 184210ac219c2bd11c0155b2c0e55085 1108 Pfam PF12794 Mechanosensitive ion channel inner membrane domain 1 478 814 7.4E-115 T 28-03-2018 IPR025692 Mechanosensitive ion channel inner membrane domain 1 CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 Gene3D G3DSA:1.10.10.10 1 57 7.8E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 24 50 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 Gene3D G3DSA:3.30.70.920 59 150 2.7E-20 T 28-03-2018 CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 Pfam PF01037 Lrp/AsnC ligand binding domain 76 143 7.9E-18 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 SUPERFAMILY SSF54909 68 152 1.74E-19 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 SMART SM00344 6 113 2.8E-44 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 SUPERFAMILY SSF46785 4 66 5.86E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 Pfam PF13412 Winged helix-turn-helix DNA-binding 7 53 4.6E-14 T 28-03-2018 CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 22 33 2.4E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 33 52 2.4E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS25130 fa0c93a8374aa0a0d3ae6ef49335c9a0 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 6 22 2.4E-14 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 2 117 6.5E-51 T 28-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 Pfam PF03830 PTS system sorbose subfamily IIB component 163 310 1.1E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 Gene3D G3DSA:3.40.50.510 2 136 1.5E-36 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 Gene3D G3DSA:3.40.35.10 162 318 2.5E-59 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 SUPERFAMILY SSF53062 3 128 4.06E-37 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 SUPERFAMILY SSF52728 161 320 4.32E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 162 310 4.0E-55 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CI104_RS15125 ea22206569f6c162df1efef11409dcce 322 Pfam PF03610 PTS system fructose IIA component 5 116 1.4E-34 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 Gene3D G3DSA:3.40.190.10 91 180 2.5E-20 T 28-03-2018 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 Gene3D G3DSA:3.40.190.10 255 324 0.028 T 28-03-2018 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 Gene3D G3DSA:3.40.190.10 181 254 3.5E-23 T 28-03-2018 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 SUPERFAMILY SSF46785 1 85 2.89E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 Gene3D G3DSA:1.10.10.10 1 85 4.9E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 SUPERFAMILY SSF53850 91 322 7.67E-46 T 28-03-2018 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 64 6.0E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 Pfam PF03466 LysR substrate binding domain 92 292 1.3E-42 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14100 0d7d517d3408ac6f00e6d5e3eeed7b01 324 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 1.7E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 Pfam PF13521 AAA domain 234 394 6.5E-31 T 28-03-2018 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 SUPERFAMILY SSF52540 232 386 2.66E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 Pfam PF01381 Helix-turn-helix 7 59 7.0E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 Gene3D G3DSA:1.10.260.40 4 61 1.8E-10 T 28-03-2018 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 PIRSF PIRSF004776 2 410 2.2E-216 T 28-03-2018 IPR016429 Bifunctional transcriptional regulator NadR GO:0045892 KEGG: 00760+2.7.7.1+2.7.1.22 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 Gene3D G3DSA:3.40.50.620 63 230 7.3E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 66 136 4.3E-19 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 SUPERFAMILY SSF52374 66 229 6.52E-18 T 28-03-2018 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 SUPERFAMILY SSF47413 6 59 4.15E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 Gene3D G3DSA:3.40.50.300 231 398 5.5E-14 T 28-03-2018 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 SMART SM00530 6 62 4.8E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS21140 992448290b251bbbff3710d015f36ac6 410 TIGRFAM TIGR01526 nadR_NMN_Atrans: nicotinamide-nucleotide adenylyltransferase 64 395 5.5E-161 T 28-03-2018 IPR006417 Nicotinamide-nucleotide adenylyltransferase GO:0003677|GO:0006355|GO:0006810|GO:0019363 KEGG: 00760+2.7.7.1+2.7.1.22 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 Gene3D G3DSA:3.40.50.20 1 106 2.5E-30 T 28-03-2018 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 Pfam PF01820 D-ala D-ala ligase N-terminus 4 86 5.4E-17 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 4 305 2.4E-109 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 Gene3D G3DSA:3.30.1490.20 111 171 6.5E-18 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 248 276 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 63 74 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 Gene3D G3DSA:3.30.470.20 172 306 3.1E-37 T 28-03-2018 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 3 306 36.176 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 Pfam PF07478 D-ala D-ala ligase C-terminus 103 303 1.8E-69 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 SUPERFAMILY SSF52440 3 96 1.06E-28 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 SUPERFAMILY SSF56059 97 302 1.94E-57 T 28-03-2018 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 PIRSF PIRSF039102 1 45 1.7E-7 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04910 b41fba4fed55535c687207eb4fbc3b5b 306 PIRSF PIRSF039102 41 306 4.2E-97 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS02365 fd8ed7e82280e23b523c144f1967852d 293 PIRSF PIRSF000401 1 293 3.3E-94 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CI104_RS02365 fd8ed7e82280e23b523c144f1967852d 293 Gene3D G3DSA:3.40.50.150 99 292 1.2E-32 T 28-03-2018 CI104_RS02365 fd8ed7e82280e23b523c144f1967852d 293 Hamap MF_00735 Ribosomal protein L11 methyltransferase [prmA]. 3 292 33.589 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CI104_RS02365 fd8ed7e82280e23b523c144f1967852d 293 TIGRFAM TIGR00406 prmA: ribosomal protein L11 methyltransferase 3 286 4.8E-125 T 28-03-2018 IPR004498 Ribosomal protein L11 methyltransferase GO:0006479|GO:0008276 CI104_RS02365 fd8ed7e82280e23b523c144f1967852d 293 SUPERFAMILY SSF53335 43 291 3.38E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS02365 fd8ed7e82280e23b523c144f1967852d 293 Pfam PF06325 Ribosomal protein L11 methyltransferase (PrmA) 3 292 1.9E-105 T 28-03-2018 CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 740 757 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 Pfam PF07715 TonB-dependent Receptor Plug Domain 53 167 2.6E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 Gene3D G3DSA:2.40.170.20 181 757 7.9E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 54 757 2.5E-140 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 45 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 Pfam PF00593 TonB dependent receptor 281 754 6.5E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 Gene3D G3DSA:2.170.130.10 45 180 3.1E-36 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS07275 68157f529fa20f514dd704e1ca4d3881 757 SUPERFAMILY SSF56935 38 757 7.33E-137 T 28-03-2018 CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 SUPERFAMILY SSF53187 292 384 8.29E-56 T 28-03-2018 CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 SUPERFAMILY SSF53187 14 193 8.29E-56 T 28-03-2018 CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 Gene3D G3DSA:3.40.630.10 4 403 1.2E-64 T 28-03-2018 CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 PIRSF PIRSF037226 1 405 1.6E-162 T 28-03-2018 IPR017144 Peptidase M20A, amidohydrolase, predicted CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 Pfam PF01546 Peptidase family M20/M25/M40 94 351 8.9E-8 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 Pfam PF07687 Peptidase dimerisation domain 185 274 2.5E-9 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 SUPERFAMILY SSF55031 181 287 2.56E-24 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS20820 3a7bddf53d2a3dbf1b6394cc179ae717 405 TIGRFAM TIGR01891 amidohydrolases: amidohydrolase 21 343 1.2E-67 T 28-03-2018 IPR017439 Amidohydrolase GO:0016787 CI104_RS15400 40f57d8048bcb095172e662969f8a9b1 131 SUPERFAMILY SSF161084 4 127 5.49E-31 T 28-03-2018 CI104_RS15400 40f57d8048bcb095172e662969f8a9b1 131 Pfam PF01124 MAPEG family 3 120 6.5E-26 T 28-03-2018 IPR001129 Membrane-associated, eicosanoid/glutathione metabolism (MAPEG) protein CI104_RS15400 40f57d8048bcb095172e662969f8a9b1 131 Gene3D G3DSA:1.20.120.550 1 127 1.2E-24 T 28-03-2018 IPR023352 Membrane associated eicosanoid/glutathione metabolism-like domain CI104_RS03105 dbd693449204df0d2fd8601ebb6f3538 314 Gene3D G3DSA:1.20.58.370 21 63 5.1E-6 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CI104_RS03105 dbd693449204df0d2fd8601ebb6f3538 314 SUPERFAMILY SSF161098 74 303 6.28E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS03105 dbd693449204df0d2fd8601ebb6f3538 314 Gene3D G3DSA:1.10.3720.10 81 311 1.5E-43 T 28-03-2018 CI104_RS03105 dbd693449204df0d2fd8601ebb6f3538 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 312 1.9E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 Pfam PF00158 Sigma-54 interaction domain 9 170 2.2E-62 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 94 109 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 Gene3D G3DSA:1.10.10.60 244 324 1.5E-10 T 28-03-2018 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 TIGRFAM TIGR02974 phageshock_pspF: psp operon transcriptional activator 8 322 3.0E-162 T 28-03-2018 IPR014317 Transcription activator PspF CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 Gene3D G3DSA:1.10.8.60 180 243 2.9E-18 T 28-03-2018 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 SUPERFAMILY SSF46689 222 324 3.27E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 SUPERFAMILY SSF52540 9 250 1.54E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 Pfam PF02954 Bacterial regulatory protein, Fis family 284 321 9.6E-8 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 Gene3D G3DSA:3.40.50.300 1 179 8.1E-29 T 28-03-2018 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 305 324 1.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 288 305 1.2E-7 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 222 231 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS13995 b654ebede27857cf0f664dcb9640c4df 324 SMART SM00382 28 180 7.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS09065 f91c1c4fbba8d43b6e27e99791577f6c 325 TIGRFAM TIGR00682 lpxK: tetraacyldisaccharide 4'-kinase 19 322 8.4E-118 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CI104_RS09065 f91c1c4fbba8d43b6e27e99791577f6c 325 SUPERFAMILY SSF52540 46 163 5.05E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09065 f91c1c4fbba8d43b6e27e99791577f6c 325 Hamap MF_00409 Tetraacyldisaccharide 4'-kinase [lpxK]. 1 325 40.72 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CI104_RS09065 f91c1c4fbba8d43b6e27e99791577f6c 325 Gene3D G3DSA:3.40.50.300 46 290 2.8E-8 T 28-03-2018 CI104_RS09065 f91c1c4fbba8d43b6e27e99791577f6c 325 Pfam PF02606 Tetraacyldisaccharide-1-P 4'-kinase 13 318 2.2E-114 T 28-03-2018 IPR003758 Tetraacyldisaccharide 4'-kinase GO:0005524|GO:0009029|GO:0009245 KEGG: 00030+2.7.1.13|KEGG: 00540+2.7.1.130 CI104_RS24030 91658fa24f981028989713af0bca4947 301 Pfam PF00892 EamA-like transporter family 15 141 6.8E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS24030 91658fa24f981028989713af0bca4947 301 Pfam PF00892 EamA-like transporter family 152 289 6.2E-27 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS24030 91658fa24f981028989713af0bca4947 301 SUPERFAMILY SSF103481 189 293 8.5E-17 T 28-03-2018 CI104_RS24030 91658fa24f981028989713af0bca4947 301 SUPERFAMILY SSF103481 44 144 9.68E-14 T 28-03-2018 CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 Pfam PF11898 Domain of unknown function (DUF3418) 713 1297 1.2E-236 T 28-03-2018 IPR024590 RNA helicase HrpA, C-terminal CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 SMART SM00490 304 404 1.5E-15 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 TIGRFAM TIGR01967 DEAH_box_HrpA: RNA helicase HrpA 13 1297 0.0 T 28-03-2018 IPR010222 RNA helicase HrpA GO:0004004 CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 Pfam PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold 622 698 2.3E-18 T 28-03-2018 IPR011709 Domain of unknown function DUF1605 CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 SMART SM00487 75 259 7.5E-26 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 SUPERFAMILY SSF52540 74 601 7.26E-110 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 Pfam PF04408 Helicase associated domain (HA2) 466 557 3.0E-17 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 Pfam PF00271 Helicase conserved C-terminal domain 286 403 2.3E-11 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 SMART SM00847 464 559 1.1E-37 T 28-03-2018 IPR007502 Helicase-associated domain GO:0004386 CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 SMART SM00382 92 384 3.7E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 Gene3D G3DSA:3.40.50.300 253 422 7.1E-46 T 28-03-2018 CI104_RS13635 af2bfb3bda8e0cf5ec8c2c2536f5f439 1300 Gene3D G3DSA:3.40.50.300 76 235 1.7E-29 T 28-03-2018 CI104_RS24505 738e69c152f65ced684826d1e498e290 462 SUPERFAMILY SSF103473 20 444 3.4E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS24505 738e69c152f65ced684826d1e498e290 462 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 18 456 8.0E-159 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS24505 738e69c152f65ced684826d1e498e290 462 Pfam PF13347 MFS/sugar transport protein 20 443 3.0E-83 T 28-03-2018 CI104_RS24505 738e69c152f65ced684826d1e498e290 462 Gene3D G3DSA:1.20.1250.20 19 217 1.2E-8 T 28-03-2018 CI104_RS24505 738e69c152f65ced684826d1e498e290 462 Gene3D G3DSA:1.20.1250.20 218 461 4.9E-18 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 709 745 2.9E-11 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 597 622 8.2E-6 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 758 793 2.9E-12 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Pfam PF08272 Topoisomerase I zinc-ribbon-like 824 862 9.7E-22 T 28-03-2018 IPR013263 DNA topoisomerase I, zinc ribbon-like, bacterial-type GO:0003677|GO:0003917|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 106 119 2.4E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 314 323 2.4E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 490 504 2.4E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 390 406 2.4E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 PRINTS PR00417 Prokaryotic DNA topoisomerase I signature 191 209 2.4E-37 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:3.30.65.10 578 645 2.1E-11 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:3.30.65.10 696 744 1.6E-9 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:3.30.65.10 745 807 2.3E-9 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SUPERFAMILY SSF57783 744 807 2.72E-19 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Pfam PF01131 DNA topoisomerase 157 565 2.0E-127 T 28-03-2018 IPR013497 DNA topoisomerase, type IA, central GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SUPERFAMILY SSF56712 3 609 1.96E-206 T 28-03-2018 IPR023405 DNA topoisomerase, type IA, core domain CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SMART SM00436 133 221 1.0E-48 T 28-03-2018 IPR003601 DNA topoisomerase, type IA, domain 2 GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SMART SM00437 272 527 6.1E-127 T 28-03-2018 IPR003602 DNA topoisomerase, type IA, DNA-binding domain GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SUPERFAMILY SSF57783 809 864 1.05E-22 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:2.70.20.10 346 466 1.2E-38 T 28-03-2018 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SMART SM00493 3 132 8.1E-35 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 ProSitePatterns PS00396 Prokaryotic DNA topoisomerase I active site. 309 323 - T 28-03-2018 IPR023406 DNA topoisomerase, type IA, active site GO:0003917 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 SUPERFAMILY SSF57783 704 743 2.89E-7 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:2.20.25.10 809 863 1.9E-30 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:3.40.50.140 1 163 1.4E-51 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Hamap MF_00952 DNA topoisomerase 1 [topA]. 3 723 54.991 T 28-03-2018 IPR028612 DNA topoisomerase I, type IA GO:0003677|GO:0003916|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 TIGRFAM TIGR01051 topA_bact: DNA topoisomerase I 5 635 5.1E-266 T 28-03-2018 IPR005733 DNA topoisomerase I, bacterial-type GO:0003677|GO:0003917|GO:0006265 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Pfam PF01751 Toprim domain 5 142 8.8E-34 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:1.10.460.10 164 345 1.2E-45 T 28-03-2018 CI104_RS14105 630797709166a47d52ba9c7891b569c9 865 Gene3D G3DSA:1.10.460.10 467 577 3.2E-30 T 28-03-2018 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 Pfam PF00196 Bacterial regulatory proteins, luxR family 149 204 5.7E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 164 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 164 180 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 192 7.5E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 Pfam PF00072 Response regulator receiver domain 4 116 1.0E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 SMART SM00421 147 204 2.4E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 SUPERFAMILY SSF52172 3 162 3.22E-34 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 SMART SM00448 2 115 2.5E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 SUPERFAMILY SSF46894 147 210 2.55E-16 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 Gene3D G3DSA:3.40.50.2300 1 125 1.9E-35 T 28-03-2018 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 ProSitePatterns PS00622 LuxR-type HTH domain signature. 164 191 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15755 cb6db91a01cecc3bb2193d965f66120c 218 Gene3D G3DSA:1.10.10.10 126 214 2.6E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 12 21 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 Gene3D G3DSA:1.10.240.10 191 313 1.9E-31 T 28-03-2018 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 142 163 3.1E-30 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 66 85 3.1E-30 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 195 205 3.1E-30 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 PRINTS PR01039 Tryptophanyl-tRNA synthetase signature 16 32 3.1E-30 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 TIGRFAM TIGR00233 trpS: tryptophan--tRNA ligase 3 330 1.5E-117 T 28-03-2018 IPR002306 Tryptophan-tRNA ligase GO:0000166|GO:0004830|GO:0005524|GO:0005737|GO:0006436 KEGG: 00970+6.1.1.2 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 Pfam PF00579 tRNA synthetases class I (W and Y) 3 285 7.0E-90 T 28-03-2018 IPR002305 Aminoacyl-tRNA synthetase, class Ic GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 SUPERFAMILY SSF52374 5 330 4.02E-99 T 28-03-2018 CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 Gene3D G3DSA:3.40.50.620 1 190 4.4E-75 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS01820 ca9ad97628302a6e8d49b453940b3699 334 Hamap MF_00140_B Tryptophan--tRNA ligase [trpS]. 3 331 42.638 T 28-03-2018 IPR024109 Tryptophan-tRNA ligase, bacterial-type GO:0004830 KEGG: 00970+6.1.1.2|Reactome: R-HSA-379726 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 Pfam PF13377 Periplasmic binding protein-like domain 177 333 1.8E-25 T 28-03-2018 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 Gene3D G3DSA:3.40.50.2300 177 334 1.1E-35 T 28-03-2018 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 SMART SM00354 9 79 2.3E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 SUPERFAMILY SSF53822 66 319 2.14E-51 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 Gene3D G3DSA:1.10.260.40 11 65 2.5E-19 T 28-03-2018 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 Gene3D G3DSA:3.40.50.2300 66 176 3.6E-24 T 28-03-2018 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 SUPERFAMILY SSF47413 9 67 7.07E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS13285 3ed5f87d70724d10f00793dd0db40e7d 334 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 2.8E-16 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS05180 423f7e117a78af838f7b13fb3c295d65 234 TIGRFAM TIGR00230 sfsA: sugar fermentation stimulation protein 1 231 1.1E-95 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein CI104_RS05180 423f7e117a78af838f7b13fb3c295d65 234 Hamap MF_00095 Sugar fermentation stimulation protein A [sfsA]. 1 234 56.365 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein CI104_RS05180 423f7e117a78af838f7b13fb3c295d65 234 Pfam PF03749 Sugar fermentation stimulation protein 13 225 2.8E-75 T 28-03-2018 IPR005224 Sugar fermentation stimulation protein CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Pfam PF00438 S-adenosylmethionine synthetase, N-terminal domain 4 101 5.1E-43 T 28-03-2018 IPR022628 S-adenosylmethionine synthetase, N-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Gene3D G3DSA:3.30.300.10 246 383 2.5E-49 T 28-03-2018 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Pfam PF02772 S-adenosylmethionine synthetase, central domain 114 231 8.4E-46 T 28-03-2018 IPR022629 S-adenosylmethionine synthetase, central domain GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 SUPERFAMILY SSF55973 233 382 7.46E-71 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Hamap MF_00086 S-adenosylmethionine synthase [metK]. 2 381 59.964 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 PIRSF PIRSF000497 1 382 9.3E-176 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 TIGRFAM TIGR01034 metK: methionine adenosyltransferase 5 380 3.3E-200 T 28-03-2018 IPR002133 S-adenosylmethionine synthetase GO:0004478|GO:0005524|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Gene3D G3DSA:3.30.300.10 134 233 1.6E-43 T 28-03-2018 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 ProSitePatterns PS00376 S-adenosylmethionine synthase signature 1. 116 126 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 SUPERFAMILY SSF55973 112 232 2.98E-52 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 SUPERFAMILY SSF55973 3 109 1.29E-47 T 28-03-2018 IPR022636 S-adenosylmethionine synthetase superfamily GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 ProSitePatterns PS00377 S-adenosylmethionine synthase signature 2. 259 267 - T 28-03-2018 IPR022631 S-adenosylmethionine synthetase, conserved site GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Gene3D G3DSA:3.30.300.10 11 133 1.3E-44 T 28-03-2018 CI104_RS04240 0907e0722204261e1b17cc48d69e1ee4 384 Pfam PF02773 S-adenosylmethionine synthetase, C-terminal domain 233 370 5.0E-69 T 28-03-2018 IPR022630 S-adenosylmethionine synthetase, C-terminal GO:0004478|GO:0006556 KEGG: 00270+2.5.1.6|MetaCyc: PWY-5041|MetaCyc: PWY-5912|Reactome: R-HSA-156581 CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 Pfam PF00381 PTS HPr component phosphorylation site 4 84 3.4E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 41 56 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 Gene3D G3DSA:3.30.1340.10 1 89 1.7E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 PRINTS PR00107 Phosphocarrier protein signature 55 72 1.4E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 PRINTS PR00107 Phosphocarrier protein signature 14 30 1.4E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 PRINTS PR00107 Phosphocarrier protein signature 40 55 1.4E-8 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 SUPERFAMILY SSF55594 4 90 1.2E-23 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS02675 2e0990cd100cdddbc35d668d6c7ad1c2 90 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 4 84 6.8E-22 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 1015 1471 9.4E-122 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Gene3D G3DSA:2.160.20.20 725 1125 2.5E-49 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Pfam PF03797 Autotransporter beta-domain 1190 1449 6.0E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Gene3D G3DSA:2.40.128.130 1145 1471 2.7E-50 T 28-03-2018 CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 SUPERFAMILY SSF51126 537 739 1.79E-5 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 SUPERFAMILY SSF51126 783 845 1.79E-5 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Pfam PF03212 Pertactin 1005 1121 2.7E-12 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 816 845 3.6E-9 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 TIGRFAM TIGR02601 autotrns_rpt: autotransporter-associated beta strand repeat 916 945 6.5E-5 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 SUPERFAMILY SSF103515 1154 1471 1.44E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 SMART SM00869 1187 1460 8.6E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 SUPERFAMILY SSF51126 854 1122 1.91E-39 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Pfam PF12951 Passenger-associated-transport-repeat 817 844 2.0E-7 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Pfam PF12951 Passenger-associated-transport-repeat 916 945 0.02 T 28-03-2018 IPR013425 Autotransporter-associated beta strand repeat CI104_RS14135 7f8141e51e69e36e373ed0112c059411 1471 Pfam PF13018 Extended Signal Peptide of Type V secretion system 1 24 6.9E-8 T 28-03-2018 IPR024973 ESPR domain CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 Gene3D G3DSA:3.20.70.20 2 760 8.1E-297 T 28-03-2018 CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 PIRSF PIRSF000379 8 760 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 Pfam PF01228 Glycine radical 630 741 1.4E-43 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 Pfam PF02901 Pyruvate formate lyase-like 23 614 1.1E-206 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 ProSitePatterns PS00850 Glycine radical domain signature. 730 738 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 11 760 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS09005 20d1f9d726cfff3665ee236dd55e7100 760 SUPERFAMILY SSF51998 4 759 1.1E-293 T 28-03-2018 CI104_RS02290 991dac1d6e472f8b24be72019ccfeac6 252 PIRSF PIRSF039085 9 252 7.7E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS02290 991dac1d6e472f8b24be72019ccfeac6 252 Gene3D G3DSA:3.40.50.300 9 251 2.5E-73 T 28-03-2018 CI104_RS02290 991dac1d6e472f8b24be72019ccfeac6 252 SMART SM00382 37 224 5.1E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS02290 991dac1d6e472f8b24be72019ccfeac6 252 SUPERFAMILY SSF52540 12 246 6.29E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02290 991dac1d6e472f8b24be72019ccfeac6 252 Pfam PF00005 ABC transporter 28 176 3.0E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS02290 991dac1d6e472f8b24be72019ccfeac6 252 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 SMART SM00490 461 547 7.8E-21 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 SMART SM00487 10 427 1.8E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 TIGRFAM TIGR00631 uvrb: excinuclease ABC subunit B 5 652 2.1E-269 T 28-03-2018 IPR004807 UvrABC system, subunit B GO:0003677|GO:0005524|GO:0006281|GO:0006289|GO:0009381|GO:0009432 CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 SUPERFAMILY SSF52540 6 416 1.47E-117 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 Gene3D G3DSA:3.40.50.300 417 590 2.3E-31 T 28-03-2018 CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 Pfam PF12344 Ultra-violet resistance protein B 553 593 1.3E-15 T 28-03-2018 IPR024759 UvrB, YAD/RRR-motif-containing domain CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 SUPERFAMILY SSF52540 38 83 9.0E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 SUPERFAMILY SSF52540 460 588 9.0E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 Gene3D G3DSA:3.40.50.300 13 416 4.2E-32 T 28-03-2018 CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 Pfam PF00271 Helicase conserved C-terminal domain 434 545 1.8E-19 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS26400 3f938b4f7929a995daae4776c072269d 658 Pfam PF04851 Type III restriction enzyme, res subunit 17 88 6.5E-11 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 SUPERFAMILY SSF58104 234 510 2.35E-61 T 28-03-2018 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 SMART SM00283 263 510 8.9E-70 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 Gene3D G3DSA:3.40.50.10600 9 124 6.6E-24 T 28-03-2018 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 Pfam PF08447 PAS fold 31 110 5.1E-11 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 Gene3D G3DSA:1.10.287.950 125 316 1.0E-6 T 28-03-2018 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 Gene3D G3DSA:1.10.287.950 317 513 4.2E-39 T 28-03-2018 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 284 313 3.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 361 388 3.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 438 467 3.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 390 419 3.2E-37 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 SUPERFAMILY SSF55785 22 114 1.13E-21 T 28-03-2018 IPR000014 PAS domain CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 21 125 2.8E-10 T 28-03-2018 IPR000014 PAS domain CI104_RS13305 b813910fd132dbfb856645be9df5b26e 513 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 323 476 2.6E-45 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 Gene3D G3DSA:3.40.50.1100 20 129 6.5E-35 T 28-03-2018 CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 TIGRFAM TIGR01138 cysM: cysteine synthase B 3 292 2.1E-167 T 28-03-2018 IPR005858 Cysteine synthase CysM GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 TIGRFAM TIGR01136 cysKM: cysteine synthase 5 292 1.1E-127 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 SUPERFAMILY SSF53686 3 289 4.32E-93 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 30 48 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 Gene3D G3DSA:3.40.50.1100 130 303 6.9E-47 T 28-03-2018 CI104_RS18165 60aff6fd407c3536ada2cb69600cb2af 303 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 5 281 1.5E-68 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 ProSitePatterns PS01117 MarR-type HTH domain signature. 64 98 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 Gene3D G3DSA:1.10.10.10 3 146 2.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 Pfam PF01047 MarR family 31 89 1.3E-18 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 Hamap MF_01819 Transcriptional regulator SlyA [slyA]. 3 145 42.915 T 28-03-2018 IPR023071 Transcriptional regulator, SlyA CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 SUPERFAMILY SSF46785 3 141 2.8E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 49 65 1.5E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 115 135 1.5E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 66 81 1.5E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 PRINTS PR00598 Bacterial regulatory protein MarR family signature 85 101 1.5E-27 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS12445 4591bfac0ef5c5521a41ec101eb2ab8f 146 SMART SM00347 24 125 5.5E-31 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 Gene3D G3DSA:3.30.43.10 3 45 3.3E-4 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 Pfam PF00941 FAD binding domain in molybdopterin dehydrogenase 4 151 2.9E-20 T 28-03-2018 IPR002346 Molybdopterin dehydrogenase, FAD-binding GO:0016491|GO:0055114 CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 Gene3D G3DSA:3.30.465.10 54 156 3.9E-14 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 SMART SM01092 161 251 9.5E-11 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 TIGRFAM TIGR03312 Se_sel_red_FAD: probable selenate reductase, FAD-binding subunit 2 256 1.6E-127 T 28-03-2018 IPR017698 Probable selenate reductase, FAD-binding subunit CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 Gene3D G3DSA:3.30.390.50 159 257 6.3E-13 T 28-03-2018 CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 SUPERFAMILY SSF55447 164 250 7.06E-12 T 28-03-2018 IPR005107 CO dehydrogenase flavoprotein, C-terminal CI104_RS20955 cb1fd3994d76e9bf232ec0f82afb6489 259 SUPERFAMILY SSF56176 4 154 1.45E-23 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS23690 55710fbff8851e6dfda598063444b918 196 Gene3D G3DSA:1.20.1590.10 5 194 1.4E-76 T 28-03-2018 IPR023381 YP001051499.1-like domain CI104_RS23690 55710fbff8851e6dfda598063444b918 196 Pfam PF04222 Protein of unknown function (DUF416) 5 193 1.0E-82 T 28-03-2018 IPR007338 Protein of unknown function DUF416 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Gene3D G3DSA:1.10.10.60 461 505 3.4E-9 T 28-03-2018 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Pfam PF01590 GAF domain 23 154 1.3E-9 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 SUPERFAMILY SSF52540 187 422 7.43E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Hamap MF_01314 Anaerobic nitric oxide reductase transcription regulator NorR [norR]. 1 504 62.647 T 28-03-2018 IPR023944 Anaerobic nitric oxide reductase transcription regulator GO:0003700|GO:0006355 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Gene3D G3DSA:3.30.450.40 5 171 5.6E-17 T 28-03-2018 IPR029016 GAF domain-like CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 SMART SM00382 207 350 2.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Gene3D G3DSA:3.40.50.300 182 359 9.8E-27 T 28-03-2018 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 211 224 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 400 409 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 SUPERFAMILY SSF55781 22 170 2.05E-17 T 28-03-2018 IPR029016 GAF domain-like CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 273 288 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Pfam PF00158 Sigma-54 interaction domain 187 353 6.1E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 SMART SM00065 20 167 5.6E-19 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 Gene3D G3DSA:1.10.8.60 360 460 5.8E-21 T 28-03-2018 CI104_RS19750 e368ba41bf00a700230b44288d80b38e 505 SUPERFAMILY SSF46689 452 503 5.82E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS05230 d77ef3504250ece64857471d0b397039 114 Hamap MF_01380 Iron-sulfur cluster insertion protein ErpA [erpA]. 1 114 37.006 T 28-03-2018 IPR023063 FeS cluster insertion protein ErpA GO:0097428 CI104_RS05230 d77ef3504250ece64857471d0b397039 114 SUPERFAMILY SSF89360 8 103 3.34E-31 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS05230 d77ef3504250ece64857471d0b397039 114 Gene3D G3DSA:2.60.300.12 8 114 2.7E-39 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS05230 d77ef3504250ece64857471d0b397039 114 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 9 113 4.2E-39 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CI104_RS05230 d77ef3504250ece64857471d0b397039 114 Pfam PF01521 Iron-sulphur cluster biosynthesis 9 109 1.2E-20 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS05230 d77ef3504250ece64857471d0b397039 114 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 95 112 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 SUPERFAMILY SSF52413 311 419 8.5E-25 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 PIRSF PIRSF500136 1 420 2.1E-148 T 28-03-2018 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase GO:0000271|GO:0016628|GO:0055114 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 SUPERFAMILY SSF48179 206 299 3.06E-28 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 TIGRFAM TIGR03026 NDP-sugDHase: nucleotide sugar dehydrogenase 5 416 1.1E-120 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Gene3D G3DSA:1.20.5.170 206 229 1.0E-14 T 28-03-2018 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 PIRSF PIRSF000124 4 419 1.4E-76 T 28-03-2018 IPR017476 UDP-glucose/GDP-mannose dehydrogenase GO:0016616|GO:0055114 Reactome: R-HSA-173599 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Pfam PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain 324 419 4.5E-18 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 SMART SM00984 324 420 9.5E-22 T 28-03-2018 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 SUPERFAMILY SSF51735 5 198 2.96E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Hamap MF_02029 UDP-N-acetyl-D-mannosamine dehydrogenase [wecC]. 1 420 81.97 T 28-03-2018 IPR032891 UDP-N-acetyl-D-mannosamine dehydrogenase WecC GO:0009246|GO:0089714 KEGG: 00520+1.1.1.336|MetaCyc: PWY-7335 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Gene3D G3DSA:3.40.50.720 230 420 7.2E-51 T 28-03-2018 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Pfam PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain 5 188 3.7E-58 T 28-03-2018 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Gene3D G3DSA:3.40.50.720 4 205 2.8E-46 T 28-03-2018 CI104_RS24910 1b36a4dbc98edb575f84b20c16ed2173 420 Pfam PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain 206 293 1.0E-26 T 28-03-2018 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-173599 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 SUPERFAMILY SSF82114 174 307 5.45E-44 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 Pfam PF06574 FAD synthetase 12 167 4.5E-57 T 28-03-2018 IPR015864 FAD synthetase GO:0003919|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 Gene3D G3DSA:2.40.30.30 180 311 4.9E-40 T 28-03-2018 IPR023465 Riboflavin kinase domain GO:0008531|GO:0009231 Reactome: R-HSA-196843 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 SUPERFAMILY SSF52374 16 176 2.79E-33 T 28-03-2018 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 TIGRFAM TIGR00083 ribF: riboflavin biosynthesis protein RibF 18 306 3.5E-119 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 PIRSF PIRSF004491 1 311 3.9E-103 T 28-03-2018 IPR002606 Riboflavin kinase, bacterial GO:0003919|GO:0008531|GO:0009231 KEGG: 00740+2.7.1.26+2.7.7.2|MetaCyc: PWY-5523|MetaCyc: PWY-6167|MetaCyc: PWY-6168|MetaCyc: PWY-7863 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 SMART SM00904 183 307 9.9E-63 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 Pfam PF01687 Riboflavin kinase 184 305 2.7E-37 T 28-03-2018 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic GO:0008531|GO:0009231 Reactome: R-HSA-196843 CI104_RS04540 5c295ae62f8f16c56edf55fab72f6302 312 Gene3D G3DSA:3.40.50.620 1 179 6.8E-49 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 PRINTS PR00990 Ribokinase signature 105 118 6.8E-23 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 PRINTS PR00990 Ribokinase signature 217 228 6.8E-23 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 PRINTS PR00990 Ribokinase signature 173 188 6.8E-23 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 PRINTS PR00990 Ribokinase signature 6 27 6.8E-23 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 PRINTS PR00990 Ribokinase signature 33 52 6.8E-23 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 SUPERFAMILY SSF53613 2 302 8.73E-74 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 Pfam PF00294 pfkB family carbohydrate kinase 4 285 1.1E-54 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 Gene3D G3DSA:3.40.1190.20 1 310 1.2E-69 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS09940 525fe521af25645bb7b0995225871b1d 311 Hamap MF_01987 Ribokinase [rbsK]. 2 301 21.307 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 17 33 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 337 356 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 37 56 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 182 204 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 282 301 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 316 334 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 148 168 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 10 33 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 82 102 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 PRINTS PR00166 Aromatic amino acid permease signature 221 240 6.2E-92 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 Pfam PF03222 Tryptophan/tyrosine permease family 3 390 5.7E-142 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CI104_RS15645 be64113d5033e5744c7d1c223bb77b4d 403 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 7 384 7.4E-146 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 Gene3D G3DSA:1.20.272.10 208 329 9.2E-22 T 28-03-2018 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 Pfam PF09115 DNA polymerase III, delta subunit, C terminal 208 320 5.4E-34 T 28-03-2018 IPR015199 DNA polymerase III, delta subunit, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 Gene3D G3DSA:3.40.50.300 8 165 4.2E-22 T 28-03-2018 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 SUPERFAMILY SSF52540 1 205 2.44E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 Pfam PF13177 DNA polymerase III, delta subunit 12 166 3.6E-40 T 28-03-2018 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 TIGRFAM TIGR00678 holB: DNA polymerase III, delta' subunit 13 201 2.1E-58 T 28-03-2018 IPR004622 DNA polymerase III, delta prime subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 Gene3D G3DSA:1.10.8.10 169 205 1.4E-15 T 28-03-2018 CI104_RS10565 32c6c139b095264abd2acbae7581b6ec 334 SUPERFAMILY SSF48019 209 328 1.29E-34 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CI104_RS18265 2ee4731370aa0ad27dab390b0f7cfe11 279 SUPERFAMILY SSF53067 31 132 2.02E-10 T 28-03-2018 CI104_RS18265 2ee4731370aa0ad27dab390b0f7cfe11 279 Gene3D G3DSA:3.30.420.40 5 144 1.7E-14 T 28-03-2018 CI104_RS18265 2ee4731370aa0ad27dab390b0f7cfe11 279 SUPERFAMILY SSF53067 142 261 1.3E-19 T 28-03-2018 CI104_RS18265 2ee4731370aa0ad27dab390b0f7cfe11 279 Pfam PF14450 Cell division protein FtsA 142 246 3.4E-8 T 28-03-2018 CI104_RS18265 2ee4731370aa0ad27dab390b0f7cfe11 279 TIGRFAM TIGR02529 EutJ: ethanolamine utilization protein EutJ family protein 34 267 3.9E-109 T 28-03-2018 IPR013366 Ethanolamine utilisation EutJ CI104_RS18265 2ee4731370aa0ad27dab390b0f7cfe11 279 Gene3D G3DSA:3.30.420.150 145 259 9.2E-14 T 28-03-2018 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 Pfam PF13411 MerR HTH family regulatory protein 2 69 4.7E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 SMART SM00422 2 71 6.7E-32 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 TIGRFAM TIGR02043 ZntR: Zn(II)-responsive transcriptional regulator 1 131 5.2E-63 T 28-03-2018 IPR011788 Zn(II)-responsive transcriptional regulator GO:0003677|GO:0006351|GO:0008270 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 Gene3D G3DSA:1.10.1660.10 1 57 5.5E-24 T 28-03-2018 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 Gene3D G3DSA:1.10.1660.10 58 141 1.0E-24 T 28-03-2018 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 14 27 1.6E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 38 58 1.6E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 3 14 1.6E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 SUPERFAMILY SSF46955 2 121 4.03E-35 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS02185 38ccfe28df45dbf5a404b693c72a4118 141 ProSitePatterns PS00552 MerR-type HTH domain signature. 5 27 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS23585 65737faddb8ef1628dd2a961c8074930 181 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 6 147 3.0E-5 T 28-03-2018 CI104_RS06670 7a06a9305ee5e73eb475d6e3a6482ae6 558 Gene3D G3DSA:3.40.50.720 416 550 2.0E-17 T 28-03-2018 CI104_RS06670 7a06a9305ee5e73eb475d6e3a6482ae6 558 Pfam PF02254 TrkA-N domain 421 534 4.8E-25 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CI104_RS06670 7a06a9305ee5e73eb475d6e3a6482ae6 558 Gene3D G3DSA:1.20.91.10 239 320 1.6E-6 T 28-03-2018 CI104_RS06670 7a06a9305ee5e73eb475d6e3a6482ae6 558 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 15 294 5.3E-76 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CI104_RS06670 7a06a9305ee5e73eb475d6e3a6482ae6 558 Pfam PF00999 Sodium/hydrogen exchanger family 13 384 6.6E-78 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CI104_RS06670 7a06a9305ee5e73eb475d6e3a6482ae6 558 SUPERFAMILY SSF51735 418 549 6.31E-30 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 491 544 6.6E-8 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 Gene3D G3DSA:1.20.120.330 1 215 7.8E-4 T 28-03-2018 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 Pfam PF00460 Flagella basal body rod protein 5 35 2.0E-5 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 360 382 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 512 536 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 156 180 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 216 234 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 123 143 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 407 424 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 260 282 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 49 71 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 11 34 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 465 486 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 PRINTS PR01005 Flagellar hook-associated protein signature 439 458 2.8E-141 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 SUPERFAMILY SSF64518 136 544 1.57E-52 T 28-03-2018 CI104_RS10470 ceef5acc608a94eb683854528389aa29 546 TIGRFAM TIGR02492 flgK_ends: flagellar hook-associated protein FlgK 3 544 3.6E-99 T 28-03-2018 IPR002371 Flagellar hook-associated protein 1 GO:0005198|GO:0009424|GO:0044780 CI104_RS12010 d4ae65415f605934f996ecfd76283b30 277 Pfam PF03618 Kinase/pyrophosphorylase 9 267 2.2E-71 T 28-03-2018 IPR005177 Bifunctional kinase-pyrophosphorylase GO:0005524|GO:0016772 CI104_RS12010 d4ae65415f605934f996ecfd76283b30 277 Hamap MF_01062 Phosphoenolpyruvate synthase regulatory protein [ppsR]. 6 276 72.361 T 28-03-2018 IPR026530 Phosphoenolpyruvate synthase regulatory protein CI104_RS12010 d4ae65415f605934f996ecfd76283b30 277 Gene3D G3DSA:3.40.50.300 151 191 0.28 T 28-03-2018 CI104_RS12010 d4ae65415f605934f996ecfd76283b30 277 Gene3D G3DSA:3.40.50.300 192 274 7.2E-5 T 28-03-2018 CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 SMART SM00829 9 352 0.0078 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 60 74 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 Gene3D G3DSA:3.90.180.10 1 168 6.4E-36 T 28-03-2018 CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 SUPERFAMILY SSF51735 147 320 1.06E-34 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 Gene3D G3DSA:3.40.50.10730 169 323 4.5E-25 T 28-03-2018 CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 Pfam PF00107 Zinc-binding dehydrogenase 185 316 6.9E-28 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 SUPERFAMILY SSF50129 3 184 2.13E-37 T 28-03-2018 IPR011032 GroES-like CI104_RS11650 862ba09ea11fc971e0889262a1a3d7ef 358 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 132 3.4E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS13560 dd2cca3801e772c82919864c31a803e0 300 SUPERFAMILY SSF64182 1 292 1.31E-56 T 28-03-2018 CI104_RS13560 dd2cca3801e772c82919864c31a803e0 300 Pfam PF01368 DHH family 2 143 1.6E-13 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS13560 dd2cca3801e772c82919864c31a803e0 300 Pfam PF02833 DHHA2 domain 181 293 5.5E-15 T 28-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS13560 dd2cca3801e772c82919864c31a803e0 300 SMART SM01131 179 296 4.0E-33 T 28-03-2018 IPR004097 DHHA2 domain GO:0005737|GO:0016462 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS13560 dd2cca3801e772c82919864c31a803e0 300 Gene3D G3DSA:3.90.1640.10 1 186 9.2E-45 T 28-03-2018 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 TIGRFAM TIGR03592 yidC_oxa1_cterm: membrane protein insertase, YidC/Oxa1 family 353 533 1.6E-68 T 28-03-2018 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 Hamap MF_01810 Membrane protein insertase YidC [yidC]. 4 535 26.758 T 28-03-2018 IPR019998 Membrane insertase YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR01900 YidC translocation/secretion protein signature 339 355 5.3E-30 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR01900 YidC translocation/secretion protein signature 488 512 5.3E-30 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR01900 YidC translocation/secretion protein signature 468 483 5.3E-30 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 Pfam PF02096 60Kd inner membrane protein 354 533 2.9E-60 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 TIGRFAM TIGR03593 yidC_nterm: membrane protein insertase, YidC/Oxa1 family, N-terminal domain 3 352 4.6E-117 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 324 344 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 66 87 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 415 438 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 2 23 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 499 522 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 251 266 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 158 178 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 217 235 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 PRINTS PR00701 60kDa inner membrane protein signature 462 484 1.4E-109 T 28-03-2018 IPR001708 Membrane insertase OXA1/ALB3/YidC GO:0016021|GO:0051205 CI104_RS25270 b0ebdaed651148b2ce3da079007c8d3e 548 Pfam PF14849 YidC periplasmic domain 61 343 1.6E-88 T 28-03-2018 IPR028053 Membrane insertase YidC, N-terminal CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 SUPERFAMILY SSF100950 74 236 4.5E-30 T 28-03-2018 CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 Gene3D G3DSA:1.10.10.10 1 75 6.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 SMART SM00420 8 57 1.5E-11 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 Pfam PF00455 DeoR C terminal sensor domain 76 232 2.2E-44 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 SMART SM01134 73 234 3.2E-56 T 28-03-2018 CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 Gene3D G3DSA:3.40.50.1360 76 230 1.5E-27 T 28-03-2018 CI104_RS08625 2f2806d67c7cfdc290872ba4a41050f1 252 Pfam PF08220 DeoR-like helix-turn-helix domain 8 58 3.4E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS14610 ea3c34721e62c1374e9d12c41b1e3374 203 Pfam PF01464 Transglycosylase SLT domain 43 168 2.0E-28 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS14610 ea3c34721e62c1374e9d12c41b1e3374 203 Gene3D G3DSA:1.10.530.10 21 203 1.5E-28 T 28-03-2018 CI104_RS14610 ea3c34721e62c1374e9d12c41b1e3374 203 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 60 88 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CI104_RS14610 ea3c34721e62c1374e9d12c41b1e3374 203 SUPERFAMILY SSF53955 37 197 7.41E-26 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS14610 ea3c34721e62c1374e9d12c41b1e3374 203 Hamap MF_01381 Endo-type membrane-bound lytic murein transglycosylase A [emtA]. 1 203 64.549 T 28-03-2018 IPR023946 Endo-type membrane-bound lytic murein transglycosylase A GO:0008932|GO:0009279|GO:0016837|GO:0016998 CI104_RS15220 c510bc2ab73f465f26644316cd1bb483 165 SMART SM00065 9 161 1.1E-12 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS15220 c510bc2ab73f465f26644316cd1bb483 165 Gene3D G3DSA:3.30.450.40 5 155 7.2E-25 T 28-03-2018 IPR029016 GAF domain-like CI104_RS15220 c510bc2ab73f465f26644316cd1bb483 165 SUPERFAMILY SSF55781 2 149 1.09E-40 T 28-03-2018 IPR029016 GAF domain-like CI104_RS15220 c510bc2ab73f465f26644316cd1bb483 165 Pfam PF13185 GAF domain 35 151 1.6E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS27915 b5334ed40248cb590bde4cf5f88183e2 223 Pfam PF02586 SOS response associated peptidase (SRAP) 1 210 1.4E-48 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) CI104_RS27915 b5334ed40248cb590bde4cf5f88183e2 223 SUPERFAMILY SSF143081 2 216 9.94E-58 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) CI104_RS27915 b5334ed40248cb590bde4cf5f88183e2 223 Gene3D G3DSA:3.90.1680.10 1 222 2.6E-61 T 28-03-2018 IPR003738 SOS response associated peptidase (SRAP) CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 Pfam PF02355 Protein export membrane protein 433 601 1.1E-14 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 SUPERFAMILY SSF82866 337 349 4.19E-40 T 28-03-2018 CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 SUPERFAMILY SSF82866 410 606 4.19E-40 T 28-03-2018 CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 Pfam PF07549 SecD/SecF GG Motif 120 140 7.4E-6 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 Gene3D G3DSA:1.20.1640.10 383 609 3.2E-30 T 28-03-2018 CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 Pfam PF13721 SecD export protein N-terminal TM region 2 103 2.2E-38 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 TIGRFAM TIGR01129 secD: protein-export membrane protein SecD 123 601 3.1E-151 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 345 594 9.0E-84 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CI104_RS06235 779fe56a5e88f85fa38e04b8c61889d0 615 Hamap MF_01463_B Protein translocase subunit SecD [secD]. 3 615 50.567 T 28-03-2018 IPR005791 Protein translocase subunit SecD GO:0006886|GO:0015450 CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 Gene3D G3DSA:3.30.450.40 95 274 4.3E-49 T 28-03-2018 IPR029016 GAF domain-like CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 SUPERFAMILY SSF46785 24 97 1.8E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 SUPERFAMILY SSF55781 95 271 9.81E-49 T 28-03-2018 IPR029016 GAF domain-like CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 SMART SM00346 24 114 4.4E-38 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 Pfam PF09339 IclR helix-turn-helix domain 26 76 1.1E-18 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 Pfam PF01614 Bacterial transcriptional regulator 144 267 4.7E-41 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS23605 bd2e47f710a341d59946cb3c0ccd4b80 274 Gene3D G3DSA:1.10.10.10 7 85 6.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 SMART SM00420 4 56 2.3E-25 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 Pfam PF00455 DeoR C terminal sensor domain 69 225 4.1E-47 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 SUPERFAMILY SSF100950 67 227 7.53E-30 T 28-03-2018 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 SUPERFAMILY SSF46785 1 59 5.91E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 Gene3D G3DSA:1.10.10.10 1 56 8.3E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 36 54 7.1E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 22 36 7.1E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 Gene3D G3DSA:3.40.50.1360 59 229 1.1E-34 T 28-03-2018 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 Pfam PF08220 DeoR-like helix-turn-helix domain 4 59 1.4E-16 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 SMART SM01134 67 227 7.7E-61 T 28-03-2018 CI104_RS14050 c1f16633bbfb084ea360264daad5530a 249 ProSitePatterns PS00894 DeoR-type HTH domain signature. 4 38 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 Gene3D G3DSA:2.160.20.20 8 501 2.2E-40 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 Pfam PF03797 Autotransporter beta-domain 560 815 6.8E-45 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 399 837 2.0E-110 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 SUPERFAMILY SSF103515 520 837 5.62E-51 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 Gene3D G3DSA:2.40.128.130 514 837 9.2E-49 T 28-03-2018 CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 SMART SM00869 557 826 6.2E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS09645 cb1f214e1e83c936890cc833074a6fc7 837 SUPERFAMILY SSF51126 24 495 2.95E-29 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS26795 9970b3c5075f5f599b62bdef80fa4aa0 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 3.0E-158 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS26795 9970b3c5075f5f599b62bdef80fa4aa0 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 6.2E-54 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS27345 9970b3c5075f5f599b62bdef80fa4aa0 988 Pfam PF01526 Tn3 transposase DDE domain 580 966 3.0E-158 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS27345 9970b3c5075f5f599b62bdef80fa4aa0 988 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 6.2E-54 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 Pfam PF01614 Bacterial transcriptional regulator 126 251 1.5E-34 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 SUPERFAMILY SSF55781 72 257 3.99E-50 T 28-03-2018 IPR029016 GAF domain-like CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 Pfam PF09339 IclR helix-turn-helix domain 8 58 4.2E-15 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 SMART SM00346 6 97 1.1E-20 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 Gene3D G3DSA:3.30.450.40 78 262 6.6E-51 T 28-03-2018 IPR029016 GAF domain-like CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 SUPERFAMILY SSF46785 8 81 1.16E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10020 b8e2ea9bdc4ce1d12c3b315326cc81cb 265 Gene3D G3DSA:1.10.10.10 2 77 8.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 204 210 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 TIGRFAM TIGR03533 L3_gln_methyl: protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific 13 295 8.1E-139 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 TIGRFAM TIGR00536 hemK_fam: methyltransferase, HemK family 15 304 1.7E-106 T 28-03-2018 IPR004556 Modification methylase HemK GO:0006479|GO:0008276 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 Gene3D G3DSA:1.10.8.10 14 101 1.3E-12 T 28-03-2018 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 Gene3D G3DSA:3.40.50.150 102 274 1.5E-34 T 28-03-2018 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 SUPERFAMILY SSF53335 15 294 1.47E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 PIRSF PIRSF037167 2 307 3.0E-149 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 Hamap MF_02125 50S ribosomal protein L3 glutamine methyltransferase [prmB]. 6 300 54.164 T 28-03-2018 IPR017127 Ribosomal protein L3-specific, glutamine-N5-methyltransferase GO:0005622|GO:0009007|GO:0032775 CI104_RS17815 8443ece385e7f394931bd4ea574756e6 310 Pfam PF05175 Methyltransferase small domain 132 215 3.0E-16 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS25350 a6a4c15c20ca6fafa475a64e8cdfd45f 417 Gene3D G3DSA:1.10.10.10 13 105 0.0017 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25350 a6a4c15c20ca6fafa475a64e8cdfd45f 417 SUPERFAMILY SSF52540 116 380 3.4E-28 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25350 a6a4c15c20ca6fafa475a64e8cdfd45f 417 Pfam PF13614 AAA domain 115 309 2.7E-21 T 28-03-2018 IPR025669 AAA domain CI104_RS25350 a6a4c15c20ca6fafa475a64e8cdfd45f 417 Gene3D G3DSA:3.40.50.300 113 414 4.0E-36 T 28-03-2018 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 Pfam PF05496 Holliday junction DNA helicase ruvB N-terminus 7 238 1.8E-115 T 28-03-2018 IPR008824 Holliday junction DNA helicase ruvB, N-terminal GO:0006281|GO:0006310|GO:0009378 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 SMART SM00382 54 181 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 Hamap MF_00016 Holliday junction ATP-dependent DNA helicase RuvB [ruvB]. 1 336 184.475 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 SUPERFAMILY SSF52540 23 255 1.01E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 Gene3D G3DSA:1.10.10.10 260 330 1.8E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 TIGRFAM TIGR00635 ruvB: Holliday junction DNA helicase RuvB 27 329 3.0E-146 T 28-03-2018 IPR004605 DNA helicase, Holliday junction RuvB type GO:0003677|GO:0005524|GO:0006281|GO:0006310|GO:0009378 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 Pfam PF05491 Holliday junction DNA helicase ruvB C-terminus 256 329 1.1E-32 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 ProDom PD005323 DNA HELICASE HOLLIDAY JUNCTION RUVB NUCLEOTIDE-BINDING ATP-BINDING SOS RECOMBINATION RESPONSE 253 331 2.0E-40 T 28-03-2018 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal GO:0003677|GO:0006281|GO:0006310|GO:0009378 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 Gene3D G3DSA:3.40.50.300 21 184 1.8E-27 T 28-03-2018 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 Gene3D G3DSA:1.10.8.60 187 257 6.8E-31 T 28-03-2018 CI104_RS15360 9fe209164d612b44a68ae0957b056ad7 336 SUPERFAMILY SSF46785 260 333 6.46E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10845 6b320d0bf26df70540e88acd3887d39f 115 SUPERFAMILY SSF160719 16 100 8.37E-22 T 28-03-2018 CI104_RS10845 6b320d0bf26df70540e88acd3887d39f 115 Gene3D G3DSA:3.10.450.40 9 114 5.5E-18 T 28-03-2018 CI104_RS10845 6b320d0bf26df70540e88acd3887d39f 115 Pfam PF04965 Gene 25-like lysozyme 21 92 6.3E-10 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 Pfam PF01514 Secretory protein of YscJ/FliF family 33 221 6.9E-76 T 28-03-2018 IPR006182 Secretory protein YscJ/FliF CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 PIRSF PIRSF004862 2 567 1.4E-178 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 PRINTS PR01009 Flagellar M-ring protein signature 266 284 1.3E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 PRINTS PR01009 Flagellar M-ring protein signature 154 168 1.3E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 PRINTS PR01009 Flagellar M-ring protein signature 372 396 1.3E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 PRINTS PR01009 Flagellar M-ring protein signature 122 140 1.3E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 PRINTS PR01009 Flagellar M-ring protein signature 197 215 1.3E-45 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 Pfam PF08345 Flagellar M-ring protein C-terminal 253 444 1.9E-48 T 28-03-2018 IPR013556 Flagellar M-ring C-terminal CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 TIGRFAM TIGR00206 fliF: flagellar M-ring protein FliF 8 566 1.6E-216 T 28-03-2018 IPR000067 Flagellar M-ring protein FliF GO:0003774|GO:0009431|GO:0071973 CI104_RS15845 e85cce625fe72dc00b2b24b902bce0e7 567 Gene3D G3DSA:3.30.70.1530 53 116 7.4E-9 T 28-03-2018 CI104_RS28465 9ed0dde288a23597555acee3f8a13001 241 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 18 239 1.4E-71 T 28-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CI104_RS28465 9ed0dde288a23597555acee3f8a13001 241 Pfam PF05857 TraX protein 25 239 1.9E-56 T 28-03-2018 IPR008875 TraX CI104_RS11740 731b69be5b9625f315c62259f7fdba00 189 Pfam PF02627 Carboxymuconolactone decarboxylase family 59 126 1.8E-6 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CI104_RS11740 731b69be5b9625f315c62259f7fdba00 189 SUPERFAMILY SSF69118 10 180 1.92E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS11740 731b69be5b9625f315c62259f7fdba00 189 Gene3D G3DSA:1.20.1290.10 15 184 4.2E-26 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS12780 0602348e5ce99167a99df131a57278ae 67 TIGRFAM TIGR03318 YdfZ_fam: putative selenium-binding protein YdfZ 1 65 9.6E-39 T 28-03-2018 IPR017704 Putative selenium-binding protein YdfZ CI104_RS12780 0602348e5ce99167a99df131a57278ae 67 Pfam PF14001 YdfZ protein 2 65 1.6E-35 T 28-03-2018 IPR017704 Putative selenium-binding protein YdfZ CI104_RS03215 6ff6397e19b57cc6e4fc2f5159d84df7 97 Pfam PF13997 YqjK-like protein 14 86 2.7E-27 T 28-03-2018 IPR025612 YqjK-like protein CI104_RS18160 0df910d895f40baf688124534d0d0ce0 238 Gene3D G3DSA:3.40.50.880 1 236 8.2E-44 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS18160 0df910d895f40baf688124534d0d0ce0 238 Pfam PF00117 Glutamine amidotransferase class-I 28 185 5.7E-14 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS18160 0df910d895f40baf688124534d0d0ce0 238 SUPERFAMILY SSF52317 3 214 8.89E-36 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS12265 0d63927d5e5747d56a93b0624487ba7b 225 Gene3D G3DSA:1.10.3720.10 23 222 1.2E-29 T 28-03-2018 CI104_RS12265 0d63927d5e5747d56a93b0624487ba7b 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 27 115 1.6E-12 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS12265 0d63927d5e5747d56a93b0624487ba7b 225 SUPERFAMILY SSF161098 26 219 5.89E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12265 0d63927d5e5747d56a93b0624487ba7b 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 43 211 1.6E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01383 42 118 1.9E-48 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50249 3 125 5.14E-50 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 PIRSF PIRSF002158 12 273 5.0E-101 T 28-03-2018 IPR002171 Ribosomal protein L2 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 TIGRFAM TIGR01171 rplB_bact: ribosomal protein uL2 4 272 3.6E-132 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 SMART SM01382 124 251 7.5E-90 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 Hamap MF_01320_B 50S ribosomal protein L2 [rplB]. 1 272 47.144 T 28-03-2018 IPR005880 Ribosomal protein L2, bacterial/organellar-type GO:0003723|GO:0003735|GO:0006412|GO:0015934|GO:0016740 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:4.10.950.10 197 272 3.3E-35 T 28-03-2018 IPR014726 Ribosomal protein L2, domain 3 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF00181 Ribosomal Proteins L2, RNA binding domain 42 117 7.9E-34 T 28-03-2018 IPR022666 Ribosomal Proteins L2, RNA binding domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 ProSitePatterns PS00467 Ribosomal protein L2 signature. 218 229 - T 28-03-2018 IPR022671 Ribosomal protein L2, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 SUPERFAMILY SSF50104 126 269 1.44E-59 T 28-03-2018 IPR008991 Translation protein SH3-like domain CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.30.30.30 119 195 1.3E-31 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 Pfam PF03947 Ribosomal Proteins L2, C-terminal domain 125 249 9.7E-56 T 28-03-2018 IPR022669 Ribosomal protein L2, C-terminal GO:0003735|GO:0005840|GO:0006412 CI104_RS02060 b8dda3d5223018c567ea5f3ca22e9fbc 273 Gene3D G3DSA:2.40.50.140 1 114 3.6E-48 T 28-03-2018 CI104_RS03240 a3cfdef5dc9ce9b9076bcca23b7cb7a7 220 Pfam PF09335 SNARE associated Golgi protein 48 174 1.6E-22 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS23590 56705ca3ae7b0b737804246bac4fdeba 229 Gene3D G3DSA:3.40.50.880 1 229 1.4E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS23590 56705ca3ae7b0b737804246bac4fdeba 229 Pfam PF03575 Peptidase family S51 3 204 2.9E-60 T 28-03-2018 IPR005320 Peptidase S51 GO:0006508|GO:0008236 CI104_RS23590 56705ca3ae7b0b737804246bac4fdeba 229 Hamap MF_00510 Peptidase E [pepE]. 1 215 48.625 T 28-03-2018 IPR023172 Peptidase S51, dipeptidase E GO:0016805 CI104_RS23590 56705ca3ae7b0b737804246bac4fdeba 229 SUPERFAMILY SSF52317 1 218 8.39E-43 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 SMART SM00478 122 276 7.2E-22 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 Gene3D G3DSA:1.10.1670.10 242 280 5.9E-13 T 28-03-2018 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal Reactome: R-HSA-110357 CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 SUPERFAMILY SSF48150 102 274 6.28E-45 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 SUPERFAMILY SSF55945 1 97 3.77E-25 T 28-03-2018 CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 SMART SM01009 1 112 3.6E-47 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 Pfam PF06029 AlkA N-terminal domain 2 112 7.4E-29 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 Gene3D G3DSA:3.30.310.20 1 99 8.8E-30 T 28-03-2018 IPR010316 DNA-3-methyladenine glycosylase AlkA, N-terminal CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 Pfam PF00730 HhH-GPD superfamily base excision DNA repair protein 118 241 3.1E-9 T 28-03-2018 IPR003265 HhH-GPD domain GO:0006284 Reactome: R-HSA-110357 CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 ProSitePatterns PS00516 Alkylbase DNA glycosidases alkA family signature. 214 238 - T 28-03-2018 IPR000035 Alkylbase DNA glycosidase, conserved site GO:0003905|GO:0006281 CI104_RS16595 7e1d6533ffa8273052875b61145f27c9 289 Gene3D G3DSA:1.10.340.30 100 241 6.1E-26 T 28-03-2018 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 386 408 8.6E-28 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 69 86 8.6E-28 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 157 166 8.6E-28 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01181 Diaminopimelate decarboxylase signature 293 311 8.6E-28 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 Gene3D G3DSA:3.20.20.10 34 263 6.0E-49 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 Gene3D G3DSA:2.40.37.10 264 420 2.5E-46 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 Hamap MF_02120 Diaminopimelate decarboxylase [lysA]. 14 419 39.484 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 Pfam PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain 30 376 9.7E-25 T 28-03-2018 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 51 69 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 376 389 6.2E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 51 69 6.2E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 182 195 6.2E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 71 83 6.2E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 265 284 6.2E-20 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 216 229 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 SUPERFAMILY SSF50621 250 419 7.95E-59 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 SUPERFAMILY SSF51419 25 276 2.33E-57 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 TIGRFAM TIGR01048 lysA: diaminopimelate decarboxylase 9 418 1.5E-141 T 28-03-2018 IPR002986 Diaminopimelate decarboxylase, LysA GO:0008836|GO:0009089 KEGG: 00300+4.1.1.20|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS20425 34c0845e44231b575fad22cc5464e898 420 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 33 275 4.9E-65 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CI104_RS00570 e216e5db9a5beee74c8251526cfe29ae 337 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 2.9E-20 T 28-03-2018 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 CI104_RS00570 e216e5db9a5beee74c8251526cfe29ae 337 Pfam PF01501 Glycosyl transferase family 8 29 275 3.0E-65 T 28-03-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 CI104_RS00570 e216e5db9a5beee74c8251526cfe29ae 337 Gene3D G3DSA:3.90.550.10 28 310 1.4E-45 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS00570 e216e5db9a5beee74c8251526cfe29ae 337 SUPERFAMILY SSF53448 29 298 5.06E-64 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS21410 95878d7315369abff823e44b03a6ebaa 1089 SMART SM00487 305 540 1.2E-9 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS21410 95878d7315369abff823e44b03a6ebaa 1089 Pfam PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) 51 235 2.0E-10 T 28-03-2018 IPR007409 Restriction endonuclease, type I, HsdR, N-terminal GO:0003677|GO:0004519|GO:0006304 CI104_RS21410 95878d7315369abff823e44b03a6ebaa 1089 Pfam PF04851 Type III restriction enzyme, res subunit 309 469 1.2E-12 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CI104_RS21410 95878d7315369abff823e44b03a6ebaa 1089 Gene3D G3DSA:3.40.50.300 284 525 4.4E-25 T 28-03-2018 CI104_RS21410 95878d7315369abff823e44b03a6ebaa 1089 SUPERFAMILY SSF52540 499 569 1.38E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21410 95878d7315369abff823e44b03a6ebaa 1089 SUPERFAMILY SSF52540 292 471 1.38E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22190 ac90c46a997095642e8b1900e32aa70e 172 Pfam PF08020 Protein of unknown function (DUF1706) 1 165 3.1E-55 T 28-03-2018 IPR012550 Protein of unknown function DUF1706 CI104_RS22190 ac90c46a997095642e8b1900e32aa70e 172 PIRSF PIRSF031551 1 170 1.0E-59 T 28-03-2018 IPR012550 Protein of unknown function DUF1706 CI104_RS22190 ac90c46a997095642e8b1900e32aa70e 172 Gene3D G3DSA:1.20.120.450 1 150 2.9E-10 T 28-03-2018 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 101 122 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 362 381 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 14 30 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 131 153 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 272 293 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 332 355 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 74 98 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 159 179 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 215 232 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 244 264 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 43 62 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 297 317 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 Gene3D G3DSA:1.20.1250.20 1 197 1.3E-30 T 28-03-2018 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 Pfam PF07690 Major Facilitator Superfamily 9 348 1.8E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 SUPERFAMILY SSF103473 3 387 1.57E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS25780 e8d090dc43934ed37f316d3e028d04e3 394 Gene3D G3DSA:1.20.1250.20 198 389 1.5E-14 T 28-03-2018 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 101 122 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 362 381 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 14 30 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 131 153 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 272 293 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 332 355 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 74 98 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 159 179 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 215 232 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 244 264 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 43 62 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 PRINTS PR01035 Tetracycline resistance protein signature 297 317 3.5E-148 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 ProSitePatterns PS00216 Sugar transport proteins signature 1. 61 77 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 Gene3D G3DSA:1.20.1250.20 1 197 1.3E-30 T 28-03-2018 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 Pfam PF07690 Major Facilitator Superfamily 9 348 1.8E-40 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 SUPERFAMILY SSF103473 3 387 1.57E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS27430 e8d090dc43934ed37f316d3e028d04e3 394 Gene3D G3DSA:1.20.1250.20 198 389 1.5E-14 T 28-03-2018 CI104_RS18915 3b83d6df82886429caac589054781051 432 Gene3D G3DSA:1.20.1250.20 231 429 2.6E-19 T 28-03-2018 CI104_RS18915 3b83d6df82886429caac589054781051 432 Pfam PF00083 Sugar (and other) transporter 24 221 5.5E-26 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS18915 3b83d6df82886429caac589054781051 432 Pfam PF00083 Sugar (and other) transporter 224 422 4.0E-11 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS18915 3b83d6df82886429caac589054781051 432 ProSitePatterns PS00217 Sugar transport proteins signature 2. 133 158 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS18915 3b83d6df82886429caac589054781051 432 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 417 2.8E-144 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CI104_RS18915 3b83d6df82886429caac589054781051 432 Gene3D G3DSA:1.20.1250.20 17 230 2.2E-25 T 28-03-2018 CI104_RS18915 3b83d6df82886429caac589054781051 432 SUPERFAMILY SSF103473 18 430 1.57E-65 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS03235 90800538f2fdc20635853aaa53b0fc92 127 Hamap MF_00904 Modulator protein MzrA [mzrA]. 2 116 29.259 T 28-03-2018 IPR026574 Modulator protein MzrA CI104_RS03235 90800538f2fdc20635853aaa53b0fc92 127 Pfam PF13721 SecD export protein N-terminal TM region 16 104 4.2E-16 T 28-03-2018 IPR027398 SecD export protein N-terminal TM domain CI104_RS03120 17d4f46d1d2e3bf15cdc910fa2c0ccc0 444 PIRSF PIRSF002808 2 444 5.2E-36 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS03120 17d4f46d1d2e3bf15cdc910fa2c0ccc0 444 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 25 434 6.6E-138 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS03120 17d4f46d1d2e3bf15cdc910fa2c0ccc0 444 Gene3D G3DSA:1.20.1250.20 5 229 5.4E-36 T 28-03-2018 CI104_RS03120 17d4f46d1d2e3bf15cdc910fa2c0ccc0 444 Pfam PF07690 Major Facilitator Superfamily 23 366 4.6E-47 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS03120 17d4f46d1d2e3bf15cdc910fa2c0ccc0 444 Gene3D G3DSA:1.20.1250.20 239 444 3.0E-25 T 28-03-2018 CI104_RS03120 17d4f46d1d2e3bf15cdc910fa2c0ccc0 444 SUPERFAMILY SSF103473 6 443 5.23E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS10325 a105aad505b81971136159c181fb1c00 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 306 3.9E-146 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CI104_RS10325 a105aad505b81971136159c181fb1c00 306 PIRSF PIRSF026649 2 306 1.7E-108 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CI104_RS10325 a105aad505b81971136159c181fb1c00 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 297 1.2E-118 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CI104_RS10325 a105aad505b81971136159c181fb1c00 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 306 51.359 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CI104_RS27815 120bdb7a036ff913f11e2e34373208d2 276 Pfam PF02384 N-6 DNA Methylase 137 238 1.1E-8 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CI104_RS27815 120bdb7a036ff913f11e2e34373208d2 276 Gene3D G3DSA:3.40.50.150 137 261 6.7E-9 T 28-03-2018 CI104_RS27815 120bdb7a036ff913f11e2e34373208d2 276 SUPERFAMILY SSF53335 118 236 2.22E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 SUPERFAMILY SSF51998 175 698 1.56E-184 T 28-03-2018 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 ProSitePatterns PS00089 Ribonucleotide reductase large subunit signature. 566 588 - T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 Pfam PF02867 Ribonucleotide reductase, barrel domain 176 693 2.2E-139 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 SUPERFAMILY SSF48168 15 174 1.57E-61 T 28-03-2018 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 Pfam PF08343 Ribonucleotide reductase N-terminal 16 97 1.7E-26 T 28-03-2018 IPR013554 Ribonucleotide reductase N-terminal KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 TIGRFAM TIGR04170 RNR_1b_NrdE: ribonucleoside-diphosphate reductase, class 1b, alpha subunit 15 714 0.0 T 28-03-2018 IPR026459 Ribonucleotide reductase, class 1b, subunit NrdE KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 Pfam PF00317 Ribonucleotide reductase, all-alpha domain 99 171 6.5E-12 T 28-03-2018 IPR013509 Ribonucleotide reductase large subunit, N-terminal GO:0004748|GO:0005524|GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 Gene3D G3DSA:3.20.70.20 82 700 1.4E-156 T 28-03-2018 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 TIGRFAM TIGR02506 NrdE_NrdA: ribonucleoside-diphosphate reductase, alpha subunit 103 696 1.5E-157 T 28-03-2018 IPR013346 Ribonucleotide reductase, class I , alpha subunit GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 426 449 9.0E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 493 516 9.0E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 382 393 9.0E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 465 487 9.0E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 577 604 9.0E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19575 58120f7dd976f90600643af06e7b9146 714 PRINTS PR01183 Ribonucleotide reductase large chain signature 251 270 9.0E-33 T 28-03-2018 IPR000788 Ribonucleotide reductase large subunit, C-terminal GO:0006260|GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS06545 d27756023139e018f0e990bf79827ab6 516 Gene3D G3DSA:3.20.20.450 269 516 4.6E-81 T 28-03-2018 IPR001633 EAL domain CI104_RS06545 d27756023139e018f0e990bf79827ab6 516 SUPERFAMILY SSF141868 273 514 1.83E-75 T 28-03-2018 IPR001633 EAL domain CI104_RS06545 d27756023139e018f0e990bf79827ab6 516 Pfam PF00563 EAL domain 274 501 3.4E-66 T 28-03-2018 IPR001633 EAL domain CI104_RS06545 d27756023139e018f0e990bf79827ab6 516 Pfam PF12792 CSS motif domain associated with EAL 39 242 2.3E-42 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CI104_RS06545 d27756023139e018f0e990bf79827ab6 516 SMART SM00052 267 507 3.5E-108 T 28-03-2018 IPR001633 EAL domain CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 Gene3D G3DSA:3.40.50.720 189 309 2.0E-23 T 28-03-2018 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 SUPERFAMILY SSF50129 318 369 1.25E-11 T 28-03-2018 IPR011032 GroES-like CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 Gene3D G3DSA:3.90.180.10 1 188 6.8E-59 T 28-03-2018 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 Gene3D G3DSA:3.90.180.10 310 369 7.4E-6 T 28-03-2018 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.3E-220 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 2.7E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 SUPERFAMILY SSF51735 161 334 1.42E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 SUPERFAMILY SSF50129 1 184 2.43E-70 T 28-03-2018 IPR011032 GroES-like CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 3.6E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS27435 54f468a3e1eefadab974fe531cd737fa 369 SMART SM00829 12 367 2.1E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 Gene3D G3DSA:3.40.50.720 189 309 2.0E-23 T 28-03-2018 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 SUPERFAMILY SSF50129 318 369 1.25E-11 T 28-03-2018 IPR011032 GroES-like CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 Gene3D G3DSA:3.90.180.10 1 188 6.8E-59 T 28-03-2018 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 Gene3D G3DSA:3.90.180.10 310 369 7.4E-6 T 28-03-2018 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.3E-220 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 Pfam PF00107 Zinc-binding dehydrogenase 197 329 2.7E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 SUPERFAMILY SSF51735 161 334 1.42E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 SUPERFAMILY SSF50129 1 184 2.43E-70 T 28-03-2018 IPR011032 GroES-like CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 3.6E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS25785 54f468a3e1eefadab974fe531cd737fa 369 SMART SM00829 12 367 2.1E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS17075 f84b2ae11732baf4ecd2ae3d9be12360 75 PIRSF PIRSF006188 1 72 1.2E-38 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CI104_RS17075 f84b2ae11732baf4ecd2ae3d9be12360 75 ProDom PD027794 UPF0352 YEJL NTHI1007 CPS_2611 VF1649 VV1166 HD1515 VP2129 YPO1261/Y2923/YP0880 ECA2748 1 69 6.0E-32 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CI104_RS17075 f84b2ae11732baf4ecd2ae3d9be12360 75 SUPERFAMILY SSF158651 1 75 2.09E-32 T 28-03-2018 IPR023202 YejL-like domain CI104_RS17075 f84b2ae11732baf4ecd2ae3d9be12360 75 Hamap MF_00816 UPF0352 protein YejL [yejL]. 1 71 24.51 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CI104_RS17075 f84b2ae11732baf4ecd2ae3d9be12360 75 Pfam PF07208 Protein of unknown function (DUF1414) 26 69 1.3E-24 T 28-03-2018 IPR009857 Uncharacterised protein family UPF0352 CI104_RS17075 f84b2ae11732baf4ecd2ae3d9be12360 75 Gene3D G3DSA:1.10.3390.10 2 71 8.0E-36 T 28-03-2018 IPR023202 YejL-like domain CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Gene3D G3DSA:1.10.1790.10 280 392 2.9E-21 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 509 627 3.2E-17 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Gene3D G3DSA:1.10.10.10 86 153 1.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Gene3D G3DSA:1.10.10.10 3 68 2.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Gene3D G3DSA:3.40.50.2300 398 483 2.6E-12 T 28-03-2018 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 SUPERFAMILY SSF63520 292 391 5.89E-22 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Pfam PF05043 Mga helix-turn-helix domain 88 165 4.9E-13 T 28-03-2018 IPR007737 Mga helix-turn-helix domain CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 SUPERFAMILY SSF52794 401 478 1.67E-5 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Pfam PF08279 HTH domain 7 63 1.7E-10 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Gene3D G3DSA:1.10.1790.10 189 279 1.4E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Gene3D G3DSA:3.40.930.10 490 631 6.6E-22 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 Pfam PF00874 PRD domain 300 386 2.4E-19 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 ProSitePatterns PS00894 DeoR-type HTH domain signature. 7 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS22145 1dcd0e59bdd220838d7d55e6af3ed6b6 636 SUPERFAMILY SSF55804 490 628 1.33E-25 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 Hamap MF_01107 Acetylornithine/succinyldiaminopimelate aminotransferase [argD]. 14 401 45.025 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 223 260 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 Pfam PF00202 Aminotransferase class-III 26 400 1.1E-138 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 Gene3D G3DSA:3.90.1150.10 1 175 1.5E-43 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 Gene3D G3DSA:3.90.1150.10 294 403 8.2E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 Gene3D G3DSA:3.40.640.10 176 293 9.1E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 TIGRFAM TIGR00707 argD: transaminase, acetylornithine/succinylornithine family 17 400 2.6E-150 T 28-03-2018 IPR004636 Acetylornithine/Succinylornithine transaminase family GO:0006525|GO:0008483 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 PIRSF PIRSF000521 28 156 2.5E-6 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 PIRSF PIRSF000521 174 403 2.2E-37 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 TIGRFAM TIGR03246 arg_catab_astC: succinylornithine transaminase family 8 404 5.1E-202 T 28-03-2018 IPR017652 Acetyl/Succinylornithine transaminase family, bacteria GO:0006520|GO:0008483|GO:0030170 CI104_RS01900 51bb88dfcca2740b05b9d996da14b33a 405 SUPERFAMILY SSF53383 19 400 2.75E-124 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 173 185 5.3E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 11 27 5.3E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 32 46 5.3E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 52 65 5.3E-14 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 SUPERFAMILY SSF53335 7 256 2.85E-64 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 Gene3D G3DSA:3.40.50.150 2 256 5.1E-38 T 28-03-2018 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 11 231 3.4E-26 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 TIGRFAM TIGR00571 dam: DNA adenine methylase 7 253 3.1E-34 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS10710 164f0eb65c77d741603fe677a8d8ec39 256 PIRSF PIRSF000398 1 256 1.3E-48 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CI104_RS27325 bc592936d0fb0b96134c26f31e659fb1 965 Pfam PF01526 Tn3 transposase DDE domain 571 957 2.5E-127 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS27325 bc592936d0fb0b96134c26f31e659fb1 965 Pfam PF13700 Domain of unknown function (DUF4158) 6 169 1.3E-46 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 154 181 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 118 294 2.9E-51 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 SUPERFAMILY SSF52283 7 138 6.59E-50 T 28-03-2018 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 SUPERFAMILY SSF51735 108 295 3.76E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 14 326 1.2E-37 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 SUPERFAMILY SSF55021 328 409 1.03E-19 T 28-03-2018 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 200 222 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 Gene3D G3DSA:3.40.50.720 136 295 7.4E-42 T 28-03-2018 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 229 245 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 Gene3D G3DSA:3.30.70.260 328 409 1.0E-16 T 28-03-2018 CI104_RS21120 0cd8f61284199b16591df01842f3d7d4 410 Gene3D G3DSA:3.40.50.720 1 135 1.2E-42 T 28-03-2018 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Pfam PF01029 NusB family 6 127 3.0E-25 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 317 329 2.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 411 428 2.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 222 236 2.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 251 261 2.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 PRINTS PR02008 RNA (C5-cytosine) methyltransferase signature 367 383 2.1E-31 T 28-03-2018 IPR023267 RNA (C5-cytosine) methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Hamap MF_01856 Ribosomal RNA small subunit methyltransferase B [rsmB]. 1 429 72.391 T 28-03-2018 IPR023541 rRNA small subunit methyltransferase B, enterobacteriaceae GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Gene3D G3DSA:3.30.70.1170 173 230 1.6E-17 T 28-03-2018 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Gene3D G3DSA:3.40.50.150 231 429 9.5E-53 T 28-03-2018 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Gene3D G3DSA:1.10.287.730 146 172 5.7E-15 T 28-03-2018 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 SUPERFAMILY SSF53335 145 428 3.8E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Pfam PF01189 16S rRNA methyltransferase RsmB/F 241 426 2.6E-76 T 28-03-2018 IPR001678 SAM-dependent methyltransferase RsmB/NOP2-type GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 ProSitePatterns PS01153 NOL1/NOP2/sun family signature. 316 327 - T 28-03-2018 IPR018314 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p, conserved site GO:0003723|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 SUPERFAMILY SSF48013 6 149 3.27E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 TIGRFAM TIGR00563 rsmB: 16S rRNA (cytosine(967)-C(5))-methyltransferase 8 429 9.2E-187 T 28-03-2018 IPR004573 rRNA small subunit methyltransferase B GO:0006364|GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS02205 303d72b5e3d7d2923b08a242420536e3 429 Gene3D G3DSA:1.10.940.10 1 145 1.2E-32 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 Gene3D G3DSA:1.25.40.10 233 335 3.4E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 Pfam PF13432 Tetratricopeptide repeat 113 170 0.0024 T 28-03-2018 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 Hamap MF_00994 Lipopolysaccharide assembly protein B [lapB]. 4 387 37.107 T 28-03-2018 IPR030865 Lipopolysaccharide assembly protein B GO:0008653 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 SMART SM00028 180 213 72.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 SMART SM00028 141 174 290.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 SMART SM00028 69 102 59.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 SMART SM00028 214 247 0.0079 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 SUPERFAMILY SSF48452 104 281 3.75E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 Gene3D G3DSA:1.25.40.10 122 232 4.8E-19 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 Pfam PF14559 Tetratricopeptide repeat 191 246 4.5E-6 T 28-03-2018 CI104_RS14070 fbfd02ca8f2790d1aaa554084374e2bf 389 Gene3D G3DSA:1.25.40.10 37 121 3.2E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SMART SM00387 699 808 1.3E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:1.10.287.130 576 648 1.3E-15 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SMART SM00388 585 652 1.1E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SMART SM00448 830 941 6.0E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Pfam PF01627 Hpt domain 983 1052 9.5E-6 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SUPERFAMILY SSF53850 52 267 2.14E-21 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SUPERFAMILY SSF53850 305 521 3.23E-34 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:3.40.190.10 423 521 1.3E-6 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:3.40.50.2300 815 951 6.0E-35 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:3.40.190.10 288 422 8.4E-20 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 700 807 9.3E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:1.20.120.160 952 1059 3.3E-10 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SUPERFAMILY SSF47226 924 1049 6.67E-13 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SUPERFAMILY SSF55874 642 806 1.57E-41 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:3.40.190.10 47 158 9.1E-11 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:3.40.190.10 160 232 8.7E-4 T 28-03-2018 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SUPERFAMILY SSF47384 571 652 2.94E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Pfam PF00072 Response regulator receiver domain 832 939 1.3E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Pfam PF00512 His Kinase A (phospho-acceptor) domain 586 652 8.5E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 305 520 5.1E-28 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 66 267 1.5E-14 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 PRINTS PR00344 Bacterial sensor protein C-terminal signature 735 749 6.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 PRINTS PR00344 Bacterial sensor protein C-terminal signature 753 763 6.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 PRINTS PR00344 Bacterial sensor protein C-terminal signature 768 786 6.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 PRINTS PR00344 Bacterial sensor protein C-terminal signature 792 805 6.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SUPERFAMILY SSF52172 829 961 8.54E-32 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 Gene3D G3DSA:3.30.565.10 662 813 2.4E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SMART SM00062 304 523 6.8E-31 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS20720 39d5d538d52c159bec52a6507a604001 1060 SMART SM00062 58 280 5.6E-4 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17315 7e52c9160e7d2440d10aa4caf6432503 376 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 115 131 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS17315 7e52c9160e7d2440d10aa4caf6432503 376 SUPERFAMILY SSF47240 3 340 7.83E-116 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS17315 7e52c9160e7d2440d10aa4caf6432503 376 Gene3D G3DSA:1.10.620.20 1 346 7.6E-115 T 28-03-2018 CI104_RS17315 7e52c9160e7d2440d10aa4caf6432503 376 Pfam PF00268 Ribonucleotide reductase, small chain 32 332 6.0E-49 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 Pfam PF03061 Thioesterase superfamily 20 103 1.4E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 SUPERFAMILY SSF54637 4 133 1.91E-39 T 28-03-2018 IPR029069 HotDog domain CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 TIGRFAM TIGR02799 thio_ybgC: tol-pal system-associated acyl-CoA thioesterase 6 130 2.2E-51 T 28-03-2018 IPR014166 Tol-Pal system-associated acyl-CoA thioesterase GO:0016790 CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 Gene3D G3DSA:3.10.129.10 2 134 1.1E-36 T 28-03-2018 CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 9 125 1.3E-49 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 PIRSF PIRSF003230 1 134 9.0E-50 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CI104_RS08055 5838f50b83ec7cdfbfd741047e6eb715 134 ProSitePatterns PS01328 4-hydroxybenzoyl-CoA thioesterase family active site. 11 28 - T 28-03-2018 IPR008272 4-hydroxybenzoyl-CoA thioesterase, active site GO:0016787 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SMART SM00073 819 914 3.5E-21 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SUPERFAMILY SSF52172 668 786 3.42E-35 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SMART SM00304 200 252 1.7E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Gene3D G3DSA:1.10.287.130 282 353 2.2E-20 T 28-03-2018 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SUPERFAMILY SSF47226 764 777 5.89E-23 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SUPERFAMILY SSF47226 808 909 5.89E-23 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 404 519 2.7E-32 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SMART SM00388 292 357 3.6E-25 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SUPERFAMILY SSF47384 277 358 2.35E-22 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Gene3D G3DSA:3.40.50.2300 660 788 6.6E-37 T 28-03-2018 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Pfam PF00072 Response regulator receiver domain 670 781 5.0E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SUPERFAMILY SSF158472 200 249 7.45E-5 T 28-03-2018 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SMART SM00387 404 520 9.6E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Pfam PF00512 His Kinase A (phospho-acceptor) domain 293 357 8.7E-20 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SMART SM00448 668 781 1.7E-33 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Gene3D G3DSA:3.30.565.10 361 527 6.0E-48 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Pfam PF01627 Hpt domain 828 908 1.2E-12 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 480 498 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 504 517 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 445 459 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 PRINTS PR00344 Bacterial sensor protein C-terminal signature 463 473 2.9E-13 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Pfam PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) 31 177 9.9E-54 T 28-03-2018 IPR019247 Histidine kinase BarA, N-terminal CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 SUPERFAMILY SSF55874 346 516 1.44E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS20060 eebe14664b803e3f95ca2f74fdbeffd7 918 Gene3D G3DSA:1.20.120.160 805 918 8.8E-20 T 28-03-2018 CI104_RS11010 8ec434debbf077efbe2baf40529b367a 416 Gene3D G3DSA:3.40.718.10 10 416 1.6E-134 T 28-03-2018 CI104_RS11010 8ec434debbf077efbe2baf40529b367a 416 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 303 322 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CI104_RS11010 8ec434debbf077efbe2baf40529b367a 416 SMART SM01329 28 412 3.7E-181 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS11010 8ec434debbf077efbe2baf40529b367a 416 TIGRFAM TIGR00183 prok_nadp_idh: isocitrate dehydrogenase, NADP-dependent 1 416 1.2E-239 T 28-03-2018 IPR004439 Isocitrate dehydrogenase NADP-dependent, dimeric, prokaryotic GO:0004450|GO:0006099|GO:0055114 KEGG: 00020+1.1.1.42|KEGG: 00480+1.1.1.42|KEGG: 00720+1.1.1.42|MetaCyc: PWY-5913|MetaCyc: PWY-6549|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7124|MetaCyc: PWY-7254|MetaCyc: PWY-7268 CI104_RS11010 8ec434debbf077efbe2baf40529b367a 416 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 29 412 1.6E-117 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS11010 8ec434debbf077efbe2baf40529b367a 416 SUPERFAMILY SSF53659 3 416 2.11E-150 T 28-03-2018 CI104_RS20840 4353da05a0e6dcf7e71732672ddbe5f0 236 SUPERFAMILY SSF53681 122 228 8.18E-20 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20840 4353da05a0e6dcf7e71732672ddbe5f0 236 Gene3D G3DSA:3.40.50.1860 121 217 1.6E-18 T 28-03-2018 CI104_RS20840 4353da05a0e6dcf7e71732672ddbe5f0 236 TIGRFAM TIGR00035 asp_race: aspartate racemase 6 228 2.3E-47 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CI104_RS20840 4353da05a0e6dcf7e71732672ddbe5f0 236 Gene3D G3DSA:3.40.50.1860 5 120 2.5E-36 T 28-03-2018 CI104_RS20840 4353da05a0e6dcf7e71732672ddbe5f0 236 SUPERFAMILY SSF53681 7 115 4.09E-32 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20840 4353da05a0e6dcf7e71732672ddbe5f0 236 Pfam PF01177 Asp/Glu/Hydantoin racemase 10 228 6.5E-59 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS00435 cac5dcf959ef260469e8e0cd4020476a 463 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 375 395 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS00435 cac5dcf959ef260469e8e0cd4020476a 463 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 29 457 7.3E-142 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS00435 cac5dcf959ef260469e8e0cd4020476a 463 Pfam PF00860 Permease family 34 426 3.2E-110 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS01490 f0ca7f81d17cd6def26bad90c4373a4f 248 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 12 238 2.1E-40 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CI104_RS01490 f0ca7f81d17cd6def26bad90c4373a4f 248 SUPERFAMILY SSF51695 5 239 2.51E-61 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CI104_RS01490 f0ca7f81d17cd6def26bad90c4373a4f 248 Gene3D G3DSA:3.20.20.190 2 242 8.0E-59 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 207 373 3.9E-16 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 307 338 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 Gene3D G3DSA:3.40.50.150 1 373 1.0E-42 T 28-03-2018 CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 Hamap MF_01012 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC [rlmC]. 1 375 79.694 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 357 367 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 TIGRFAM TIGR02085 meth_trns_rumB: 23S rRNA (uracil-5-)-methyltransferase RumB 2 374 3.7E-215 T 28-03-2018 IPR011825 23S rRNA (uracil(747)-C(5))-methyltransferase RlmC GO:0016070|GO:0016436 CI104_RS08735 7a75a07e44731e065ecb59ff7c2afe9a 375 SUPERFAMILY SSF53335 3 374 2.91E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS04520 ce3d61fc9288b063e1cc50a9dd6d2ce2 388 Gene3D G3DSA:1.20.1530.10 2 386 7.7E-155 T 28-03-2018 IPR023171 Na/H antiporter domain CI104_RS04520 ce3d61fc9288b063e1cc50a9dd6d2ce2 388 Pfam PF06965 Na+/H+ antiporter 1 6 380 3.3E-150 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CI104_RS04520 ce3d61fc9288b063e1cc50a9dd6d2ce2 388 TIGRFAM TIGR00773 NhaA: Na+/H+ antiporter NhaA 7 380 6.2E-193 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CI104_RS04520 ce3d61fc9288b063e1cc50a9dd6d2ce2 388 Hamap MF_01844 Na(+)/H(+) antiporter NhaA [nhaA]. 4 386 24.014 T 28-03-2018 IPR004670 Na+/H+ antiporter NhaA GO:0006814|GO:0006885|GO:0016021 CI104_RS02945 6f7c19296e45b180c559baa8c1004e3a 331 Pfam PF01136 Peptidase family U32 76 330 5.4E-66 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS02945 6f7c19296e45b180c559baa8c1004e3a 331 SUPERFAMILY SSF51391 11 162 1.94E-5 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS02945 6f7c19296e45b180c559baa8c1004e3a 331 Gene3D G3DSA:3.20.20.150 9 329 1.9E-18 T 28-03-2018 CI104_RS02945 6f7c19296e45b180c559baa8c1004e3a 331 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 SMART SM00382 286 482 9.3E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 SMART SM00382 29 219 1.1E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 ProSitePatterns PS00211 ABC transporters family signature. 406 420 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 SUPERFAMILY SSF52540 4 228 3.48E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 TIGRFAM TIGR02633 xylG: D-xylose ABC transporter, ATP-binding protein 4 502 6.6E-279 T 28-03-2018 IPR013455 ABC transporter, D-xylose, ATP-binding protein GO:0005524|GO:0015614|GO:0015753|GO:0016020 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 Gene3D G3DSA:3.40.50.300 255 512 3.1E-40 T 28-03-2018 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 Pfam PF00005 ABC transporter 278 433 3.0E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 Pfam PF00005 ABC transporter 21 171 4.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 Gene3D G3DSA:3.40.50.300 1 234 7.3E-49 T 28-03-2018 CI104_RS00825 69171c634d8b40ff33d1964d03ba1b27 513 SUPERFAMILY SSF52540 258 485 1.38E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 ProSitePatterns PS01229 Hypothetical cof family signature 2. 717 739 - T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Gene3D G3DSA:3.40.50.1000 644 782 4.3E-47 T 28-03-2018 IPR023214 HAD-like domain CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF55008 2 67 1.83E-12 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 290 794 5.6E-89 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Gene3D G3DSA:3.40.1110.10 536 643 6.7E-31 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 TIGRFAM TIGR01511 ATPase-IB1_Cu: copper-translocating P-type ATPase 232 826 2.3E-192 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF81665 285 322 9.55E-13 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF81665 766 785 9.55E-13 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF81665 419 514 9.55E-13 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 9 38 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 689 705 1.6E-8 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 748 773 1.6E-8 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 717 733 1.6E-8 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF56784 575 823 1.24E-59 T 28-03-2018 IPR023214 HAD-like domain CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF56784 518 538 1.24E-59 T 28-03-2018 IPR023214 HAD-like domain CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Pfam PF00122 E1-E2 ATPase 319 499 1.8E-50 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 251 826 9.8E-182 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 740 752 2.3E-26 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 664 674 2.3E-26 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 520 534 2.3E-26 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 717 736 2.3E-26 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 368 382 2.3E-26 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 642 653 2.3E-26 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Gene3D G3DSA:3.30.70.100 95 166 1.5E-21 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Gene3D G3DSA:3.30.70.100 1 73 3.0E-14 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 ProSitePatterns PS01047 Heavy-metal-associated domain. 104 133 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF81653 321 418 8.5E-24 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 522 528 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Gene3D G3DSA:1.20.1110.10 281 535 1.7E-44 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 SUPERFAMILY SSF55008 101 164 1.14E-18 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Pfam PF00702 haloacid dehalogenase-like hydrolase 517 731 5.2E-49 T 28-03-2018 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Pfam PF00403 Heavy-metal-associated domain 8 61 9.6E-10 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS06695 2cc17357e978c2bda929d73edd809df7 833 Pfam PF00403 Heavy-metal-associated domain 104 158 2.5E-15 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 153 169 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 Gene3D G3DSA:3.40.47.10 259 403 1.5E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 SUPERFAMILY SSF53901 1 252 8.64E-62 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 SMART SM00825 Beta-ketoacyl synthase 4 405 1.1E-12 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 SUPERFAMILY SSF53901 214 402 6.17E-60 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 2 245 1.6E-39 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 253 360 4.5E-29 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CI104_RS17780 80ad9c45eb0d181b7abafe21068c362b 405 Gene3D G3DSA:3.40.47.10 4 258 2.9E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01430 bef992298b230b792dc323c8724b3fde 684 Pfam PF09972 Predicted membrane protein (DUF2207) 51 608 1.8E-68 T 28-03-2018 IPR018702 Protein of unknown function DUF2207, membrane CI104_RS02690 85c74de5403b6f132e957b1ebbad3718 95 SUPERFAMILY SSF69754 1 95 3.27E-32 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS02690 85c74de5403b6f132e957b1ebbad3718 95 TIGRFAM TIGR00741 yfiA: ribosomal subunit interface protein 1 95 4.2E-36 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS02690 85c74de5403b6f132e957b1ebbad3718 95 Pfam PF02482 Sigma 54 modulation protein / S30EA ribosomal protein 3 93 4.9E-26 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS02690 85c74de5403b6f132e957b1ebbad3718 95 Gene3D G3DSA:3.30.160.100 1 95 5.6E-32 T 28-03-2018 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein GO:0044238 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 SUPERFAMILY SSF159800 9 187 7.59E-37 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 SMART SM00382 344 489 2.8E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 194 256 1.8E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Gene3D G3DSA:3.40.50.10660 90 168 2.9E-15 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 SUPERFAMILY SSF46689 532 632 1.88E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 SUPERFAMILY SSF55785 192 293 1.45E-10 T 28-03-2018 IPR000014 PAS domain CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Gene3D G3DSA:3.30.450.20 183 305 1.1E-10 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Gene3D G3DSA:3.40.50.300 317 496 2.2E-26 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 348 361 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 SMART SM00091 197 263 5.8E-6 T 28-03-2018 IPR000014 PAS domain CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Gene3D G3DSA:1.10.8.60 497 595 4.4E-12 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Gene3D G3DSA:1.10.10.60 596 638 7.0E-6 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Pfam PF00989 PAS fold 198 255 4.1E-7 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 SUPERFAMILY SSF52540 324 550 9.02E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Gene3D G3DSA:3.40.50.2300 4 89 3.0E-12 T 28-03-2018 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Pfam PF00158 Sigma-54 interaction domain 325 491 1.1E-67 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS21650 54c17affcb3512024b087de54dc2b424 641 Pfam PF06506 Propionate catabolism activator 33 191 6.7E-39 T 28-03-2018 IPR010524 Signal transduction response regulator, propionate catabolism activator, N-terminal GO:0000156|GO:0000160|GO:0003677|GO:0005524 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 Pfam PF13396 Phospholipase_D-nuclease N-terminal 22 59 1.1E-6 T 28-03-2018 IPR027379 Cardiolipin synthase N-terminal CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 Gene3D G3DSA:3.30.870.10 99 288 7.5E-27 T 28-03-2018 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 Pfam PF13091 PLD-like domain 331 440 2.2E-22 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 Pfam PF13091 PLD-like domain 134 244 5.8E-11 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 Gene3D G3DSA:3.30.870.10 316 476 1.0E-26 T 28-03-2018 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 SMART SM00155 399 426 8.2E-6 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 SMART SM00155 219 246 1.4E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 TIGRFAM TIGR04265 bac_cardiolipin: cardiolipin synthase 6 486 1.7E-220 T 28-03-2018 IPR022924 Cardiolipin synthase GO:0008808|GO:0016780|GO:0032049 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 Hamap MF_00190 Cardiolipin synthase A [clsA]. 2 486 51.706 T 28-03-2018 IPR030840 Cardiolipin synthase A GO:0008808|GO:0016780|GO:0032049 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 SUPERFAMILY SSF56024 66 315 1.63E-45 T 28-03-2018 CI104_RS14245 d720fe5525f235a4169d4cdc98f67ec6 486 SUPERFAMILY SSF56024 274 473 5.38E-47 T 28-03-2018 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 Pfam PF14840 Processivity clamp loader gamma complex DNA pol III C-term 214 337 9.6E-72 T 28-03-2018 IPR032780 DNA polymerase III subunit delta, C-terminal KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 SUPERFAMILY SSF48019 212 334 4.25E-35 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 Gene3D G3DSA:1.20.272.10 223 343 5.2E-28 T 28-03-2018 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 SUPERFAMILY SSF52540 1 210 4.83E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 Gene3D G3DSA:1.10.8.60 143 222 2.3E-23 T 28-03-2018 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 Gene3D G3DSA:3.40.50.300 1 140 4.4E-19 T 28-03-2018 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 TIGRFAM TIGR01128 holA: DNA polymerase III, delta subunit 18 332 1.6E-107 T 28-03-2018 IPR005790 DNA polymerase III, delta subunit GO:0003677|GO:0006260 CI104_RS07560 312568c1a4fb2c928c1f6c3195e1930a 343 Pfam PF06144 DNA polymerase III, delta subunit 21 190 8.5E-49 T 28-03-2018 IPR010372 DNA polymerase III delta, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0009360 CI104_RS13905 7be28e49f9a44949627a78d5e861454b 417 Gene3D G3DSA:1.20.1250.20 207 408 6.7E-14 T 28-03-2018 CI104_RS13905 7be28e49f9a44949627a78d5e861454b 417 Gene3D G3DSA:1.20.1250.20 1 203 1.2E-25 T 28-03-2018 CI104_RS13905 7be28e49f9a44949627a78d5e861454b 417 SUPERFAMILY SSF103473 19 410 5.36E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13905 7be28e49f9a44949627a78d5e861454b 417 Pfam PF07690 Major Facilitator Superfamily 22 363 5.3E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS23095 92eb4dd46f82267eb61153f702dd20a3 355 Pfam PF05861 Bacterial phosphonate metabolism protein (PhnI) 1 350 1.2E-151 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CI104_RS23095 92eb4dd46f82267eb61153f702dd20a3 355 PIRSF PIRSF007313 1 355 8.1E-156 T 28-03-2018 IPR008773 Phosphonate metabolism protein PhnI GO:0019634 CI104_RS04235 1486073a45930a204eec844182673e06 464 PRINTS PR00171 Sugar transporter signature 26 36 2.2E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 PRINTS PR00171 Sugar transporter signature 262 272 2.2E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 PRINTS PR00171 Sugar transporter signature 375 387 2.2E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 PRINTS PR00171 Sugar transporter signature 109 128 2.2E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 PRINTS PR00171 Sugar transporter signature 352 373 2.2E-23 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 Pfam PF00083 Sugar (and other) transporter 18 450 3.5E-142 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 ProSitePatterns PS00216 Sugar transport proteins signature 1. 307 323 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 Gene3D G3DSA:1.20.1250.20 232 463 3.0E-42 T 28-03-2018 CI104_RS04235 1486073a45930a204eec844182673e06 464 Gene3D G3DSA:1.20.1250.20 3 231 2.7E-37 T 28-03-2018 CI104_RS04235 1486073a45930a204eec844182673e06 464 SUPERFAMILY SSF103473 13 448 1.44E-78 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS04235 1486073a45930a204eec844182673e06 464 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 7 447 4.7E-152 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS04235 1486073a45930a204eec844182673e06 464 ProSitePatterns PS00217 Sugar transport proteins signature 2. 114 139 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS21205 89a9e4ec1b6ce38f1a2702b99a18f37a 59 Hamap MF_01361 UPF0391 membrane protein YtjA [ytjA]. 7 54 18.67 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CI104_RS21205 89a9e4ec1b6ce38f1a2702b99a18f37a 59 PIRSF PIRSF036466 7 59 1.3E-20 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CI104_RS21205 89a9e4ec1b6ce38f1a2702b99a18f37a 59 Pfam PF07043 Protein of unknown function (DUF1328) 12 50 2.7E-13 T 28-03-2018 IPR009760 Protein of unknown function DUF1328 GO:0005886 CI104_RS15355 0528ea935a61b79f34db7664be222e93 261 Gene3D G3DSA:1.10.3470.10 1 261 7.3E-25 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS15355 0528ea935a61b79f34db7664be222e93 261 Pfam PF00950 ABC 3 transport family 1 256 3.7E-88 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CI104_RS15355 0528ea935a61b79f34db7664be222e93 261 SUPERFAMILY SSF81345 3 257 4.05E-41 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 Gene3D G3DSA:3.20.20.80 235 604 3.7E-79 T 28-03-2018 CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 Gene3D G3DSA:2.60.40.1760 48 234 1.1E-23 T 28-03-2018 CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 Pfam PF01055 Glycosyl hydrolases family 31 230 664 1.4E-74 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 SUPERFAMILY SSF51011 585 663 6.4E-22 T 28-03-2018 CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 SUPERFAMILY SSF51445 236 583 5.76E-52 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 SUPERFAMILY SSF74650 64 225 9.42E-22 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS24500 67c112cd30787e441cef5c900c9d440e 678 Gene3D G3DSA:2.60.40.1180 605 664 1.1E-23 T 28-03-2018 CI104_RS00365 3d479ed8ce9b9ad594a4a9e3e934c70e 365 SUPERFAMILY SSF51395 2 364 7.02E-121 T 28-03-2018 CI104_RS00365 3d479ed8ce9b9ad594a4a9e3e934c70e 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 7 344 4.3E-87 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CI104_RS00365 3d479ed8ce9b9ad594a4a9e3e934c70e 365 Gene3D G3DSA:3.20.20.70 1 365 1.1E-123 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS25115 5e3dbebebd88ab4dc28a58c9588df1ff 498 Gene3D G3DSA:3.40.50.300 6 219 6.2E-18 T 28-03-2018 CI104_RS25115 5e3dbebebd88ab4dc28a58c9588df1ff 498 Pfam PF12592 Protein of unknown function (DUF3763) 444 497 4.6E-22 T 28-03-2018 IPR022547 ATPase, RavA, C-terminal GO:0016820 CI104_RS25115 5e3dbebebd88ab4dc28a58c9588df1ff 498 SMART SM00382 38 187 1.7E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25115 5e3dbebebd88ab4dc28a58c9588df1ff 498 Pfam PF07728 AAA domain (dynein-related subfamily) 41 171 2.9E-25 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CI104_RS25115 5e3dbebebd88ab4dc28a58c9588df1ff 498 Hamap MF_01625 ATPase RavA [ravA]. 1 498 57.321 T 28-03-2018 IPR023671 ATPase RavA GO:0005737|GO:0016887 CI104_RS25115 5e3dbebebd88ab4dc28a58c9588df1ff 498 SUPERFAMILY SSF52540 11 263 2.32E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 SUPERFAMILY SSF55781 87 265 1.06E-44 T 28-03-2018 IPR029016 GAF domain-like CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 Pfam PF01614 Bacterial transcriptional regulator 140 263 5.0E-30 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 Pfam PF09339 IclR helix-turn-helix domain 23 71 2.2E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 Gene3D G3DSA:3.30.450.40 90 265 1.3E-48 T 28-03-2018 IPR029016 GAF domain-like CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 SUPERFAMILY SSF46785 23 92 2.4E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 Gene3D G3DSA:1.10.10.10 13 89 1.1E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13210 7df0d3dca2fdf3174594deaa4af5bd74 265 SMART SM00346 21 110 7.6E-21 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS03290 ea0593e9a81f49132380c88164c79a4d 378 Pfam PF05175 Methyltransferase small domain 199 370 4.3E-58 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS03290 ea0593e9a81f49132380c88164c79a4d 378 Hamap MF_01859 Ribosomal RNA large subunit methyltransferase G [rlmG]. 1 373 49.331 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS03290 ea0593e9a81f49132380c88164c79a4d 378 SUPERFAMILY SSF53335 190 373 1.39E-28 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS03290 ea0593e9a81f49132380c88164c79a4d 378 PIRSF PIRSF037565 1 374 1.8E-161 T 28-03-2018 IPR017237 rRNA (guanine-N2-)-methyltransferase, RsmD GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS03290 ea0593e9a81f49132380c88164c79a4d 378 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 302 308 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS03290 ea0593e9a81f49132380c88164c79a4d 378 Gene3D G3DSA:3.40.50.150 183 378 8.1E-36 T 28-03-2018 CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 SUPERFAMILY SSF51604 105 304 3.01E-51 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 SUPERFAMILY SSF54826 1 97 1.65E-28 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 Hamap MF_00470 o-succinylbenzoate synthase [menC]. 4 320 23.744 T 28-03-2018 IPR010196 o-Succinylbenzoate synthase, MenC type1 GO:0000287|GO:0009234|GO:0016836 KEGG: 00010+4.2.1.11|KEGG: 00130+4.2.1.113|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-5837|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 Gene3D G3DSA:3.30.390.10 1 108 3.6E-17 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 TIGRFAM TIGR01927 menC_gamma/gm+: o-succinylbenzoate synthase 7 306 1.0E-129 T 28-03-2018 CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 SMART SM00922 114 209 1.1E-12 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 Pfam PF13378 Enolase C-terminal domain-like 122 279 6.4E-17 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS17445 8bf58e21eb299a61ab8284f2c1b95c5f 320 Gene3D G3DSA:3.20.20.120 109 294 1.5E-40 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20190 512a8d9d381963e5b1e83e913f067e15 238 SUPERFAMILY SSF46894 24 101 3.97E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS20190 512a8d9d381963e5b1e83e913f067e15 238 SMART SM00862 24 101 0.0043 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20190 512a8d9d381963e5b1e83e913f067e15 238 Gene3D G3DSA:1.10.10.10 4 112 5.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20190 512a8d9d381963e5b1e83e913f067e15 238 Pfam PF00486 Transcriptional regulatory protein, C terminal 36 98 4.7E-8 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS28180 60782fb44ad1e0e3ecf65827356b6116 80 SUPERFAMILY SSF54786 15 78 5.89E-29 T 28-03-2018 CI104_RS28180 60782fb44ad1e0e3ecf65827356b6116 80 Gene3D G3DSA:3.30.160.130 10 78 7.9E-38 T 28-03-2018 CI104_RS28180 60782fb44ad1e0e3ecf65827356b6116 80 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 7 80 6.0E-28 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CI104_RS28180 60782fb44ad1e0e3ecf65827356b6116 80 Pfam PF06006 Bacterial protein of unknown function (DUF905) 10 78 7.1E-42 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CI104_RS15075 f9981af572e4870a0849b49b2b57d843 231 TIGRFAM TIGR03725 T6A_YeaZ: tRNA threonylcarbamoyl adenosine modification protein YeaZ 3 219 1.4E-68 T 28-03-2018 IPR022496 tRNA threonylcarbamoyl adenosine modification protein TsaB GO:0002949 CI104_RS15075 f9981af572e4870a0849b49b2b57d843 231 Gene3D G3DSA:3.30.420.40 145 231 0.0038 T 28-03-2018 CI104_RS15075 f9981af572e4870a0849b49b2b57d843 231 Pfam PF00814 Glycoprotease family 28 133 1.4E-27 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS15075 f9981af572e4870a0849b49b2b57d843 231 Gene3D G3DSA:3.30.420.40 1 138 4.4E-39 T 28-03-2018 CI104_RS15075 f9981af572e4870a0849b49b2b57d843 231 SUPERFAMILY SSF53067 3 105 4.01E-30 T 28-03-2018 CI104_RS15075 f9981af572e4870a0849b49b2b57d843 231 SUPERFAMILY SSF53067 108 217 1.75E-31 T 28-03-2018 CI104_RS11815 38290cba8b3340e4a827052faa3a260f 304 SUPERFAMILY SSF82771 43 120 8.63E-10 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS11815 38290cba8b3340e4a827052faa3a260f 304 SMART SM00465 43 121 3.7E-13 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS11815 38290cba8b3340e4a827052faa3a260f 304 Gene3D G3DSA:3.40.1440.10 29 124 5.3E-17 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00690 Adhesin family signature 60 73 3.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00690 Adhesin family signature 237 255 3.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00690 Adhesin family signature 184 205 3.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00690 Adhesin family signature 73 90 3.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00690 Adhesin family signature 29 47 3.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00690 Adhesin family signature 263 282 3.1E-42 T 28-03-2018 IPR006128 Adhesion lipoprotein GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 SUPERFAMILY SSF53807 26 298 2.21E-90 T 28-03-2018 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 Gene3D G3DSA:3.40.50.1980 175 298 4.8E-29 T 28-03-2018 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 Pfam PF01297 Zinc-uptake complex component A periplasmic 32 295 2.9E-72 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 210 228 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 73 92 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 54 72 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 184 201 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 255 273 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 233 250 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 PRINTS PR00691 Adhesin B signature 29 50 2.7E-35 T 28-03-2018 IPR006129 Adhesin B GO:0007155 CI104_RS19875 dad24ad2bc48dd0aba1ddcee859d1b03 305 Gene3D G3DSA:3.40.50.1980 20 174 2.9E-45 T 28-03-2018 CI104_RS19335 fa289245f966286d0d9885c56a675c79 76 Gene3D G3DSA:3.30.160.130 5 73 2.4E-39 T 28-03-2018 CI104_RS19335 fa289245f966286d0d9885c56a675c79 76 SUPERFAMILY SSF54786 10 73 1.33E-29 T 28-03-2018 CI104_RS19335 fa289245f966286d0d9885c56a675c79 76 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 4 73 3.0E-24 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CI104_RS19335 fa289245f966286d0d9885c56a675c79 76 Pfam PF06006 Bacterial protein of unknown function (DUF905) 6 73 2.2E-37 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 303 336 0.006 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 603 636 310.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 351 384 17.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 461 494 63.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 711 744 310.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 671 704 270.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SMART SM00028 385 418 0.097 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Pfam PF13432 Tetratricopeptide repeat 274 336 7.1E-7 T 28-03-2018 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Pfam PF13432 Tetratricopeptide repeat 389 446 1.3E-4 T 28-03-2018 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Gene3D G3DSA:1.25.40.10 598 658 5.6E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Gene3D G3DSA:1.25.40.10 659 741 6.5E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SUPERFAMILY SSF48452 56 211 8.76E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SUPERFAMILY SSF48452 273 421 1.69E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SUPERFAMILY SSF48452 477 531 1.69E-20 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Gene3D G3DSA:1.25.40.10 357 439 2.2E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Pfam PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) 802 1144 4.2E-119 T 28-03-2018 IPR008410 Cellulose synthase operon C, C-terminal GO:0019867|GO:0030244 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Gene3D G3DSA:1.25.40.10 455 597 1.3E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Gene3D G3DSA:1.25.40.10 164 356 1.2E-15 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Gene3D G3DSA:1.25.40.10 39 163 2.5E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 Pfam PF14559 Tetratricopeptide repeat 615 669 9.1E-8 T 28-03-2018 CI104_RS01065 7b6d02f0ca9e4581de2a86d4dc68872d 1165 SUPERFAMILY SSF48452 578 738 5.06E-11 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS24235 3165340165b0ca559df17428abed8e9e 224 Pfam PF03475 3-alpha domain 169 212 2.8E-14 T 28-03-2018 IPR005163 3-alpha domain CI104_RS24235 3165340165b0ca559df17428abed8e9e 224 SUPERFAMILY SSF50800 3 223 5.18E-77 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CI104_RS24235 3165340165b0ca559df17428abed8e9e 224 Gene3D G3DSA:2.40.33.20 1 224 2.4E-52 T 28-03-2018 CI104_RS24235 3165340165b0ca559df17428abed8e9e 224 Pfam PF03473 MOSC domain 47 159 9.0E-21 T 28-03-2018 IPR005302 Molybdenum cofactor sulfurase, C-terminal GO:0003824|GO:0030151|GO:0030170 CI104_RS06210 cd81dd015e9c61ffc948bf0c5c581fa8 200 SUPERFAMILY SSF52833 1 193 1.96E-65 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS06210 cd81dd015e9c61ffc948bf0c5c581fa8 200 Pfam PF00578 AhpC/TSA family 5 139 5.2E-34 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS06210 cd81dd015e9c61ffc948bf0c5c581fa8 200 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 160 194 5.1E-12 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS06210 cd81dd015e9c61ffc948bf0c5c581fa8 200 PIRSF PIRSF000239 1 198 7.6E-59 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS06210 cd81dd015e9c61ffc948bf0c5c581fa8 200 Gene3D G3DSA:3.40.30.10 3 161 2.2E-39 T 28-03-2018 CI104_RS06210 cd81dd015e9c61ffc948bf0c5c581fa8 200 Gene3D G3DSA:3.30.1020.10 162 198 6.7E-15 T 28-03-2018 CI104_RS14980 10de7a6a0a127e0164a89bc117a86916 129 Gene3D G3DSA:3.30.1330.40 4 129 4.4E-34 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS14980 10de7a6a0a127e0164a89bc117a86916 129 Pfam PF01042 Endoribonuclease L-PSP 15 127 1.1E-30 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CI104_RS14980 10de7a6a0a127e0164a89bc117a86916 129 SUPERFAMILY SSF55298 12 127 1.73E-35 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 SUPERFAMILY SSF51445 6 374 1.7E-89 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 415 491 6.8E-7 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 SUPERFAMILY SSF51011 405 491 9.26E-28 T 28-03-2018 CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 Pfam PF00128 Alpha amylase, catalytic domain 21 367 1.4E-23 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 Gene3D G3DSA:2.60.40.1180 407 495 4.7E-30 T 28-03-2018 CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 PIRSF PIRSF001021 1 494 5.6E-209 T 28-03-2018 IPR013776 Alpha-amylase, thermostable GO:0004553|GO:0005509|GO:0005975 KEGG: 00500+3.2.1.1 CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 SMART SM00642 4 402 5.2E-63 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS15820 3f54ace7fd923cec7c2902d3f72f3d87 495 Gene3D G3DSA:3.20.20.80 4 396 8.0E-71 T 28-03-2018 CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 SMART SM00387 565 678 6.1E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Gene3D G3DSA:3.30.450.20 164 492 0.0071 T 28-03-2018 CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Hamap MF_00980 Phosphotransferase RcsD [rcsD]. 15 889 24.642 T 28-03-2018 IPR030861 Phosphotransferase RcsD GO:0000160|GO:0005887|GO:0009927 CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 565 677 1.5E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Gene3D G3DSA:1.20.120.160 774 889 4.7E-15 T 28-03-2018 CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Gene3D G3DSA:3.30.565.10 511 678 1.3E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 SUPERFAMILY SSF47226 796 888 1.44E-20 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Pfam PF01627 Hpt domain 810 869 7.7E-10 T 28-03-2018 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain GO:0000160|GO:0004871 CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 Pfam PF16359 RcsD-ABL domain 687 788 2.6E-41 T 28-03-2018 IPR032306 Phosphotransferase RcsD, RcsD-ABL domain CI104_RS17230 c29613b8989c26b9bd1feca9321ec16c 889 SUPERFAMILY SSF55874 509 680 9.03E-14 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18660 85389385dcf6d6d0600c9233546752fd 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 1.9E-41 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS18660 85389385dcf6d6d0600c9233546752fd 329 Gene3D G3DSA:1.10.3470.10 30 318 2.0E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS07290 611264ad39391f6eb54809a69eede03c 72 SMART SM00923 5 55 4.2E-21 T 28-03-2018 IPR005153 MbtH-like protein CI104_RS07290 611264ad39391f6eb54809a69eede03c 72 SUPERFAMILY SSF160582 3 66 8.63E-23 T 28-03-2018 CI104_RS07290 611264ad39391f6eb54809a69eede03c 72 Gene3D G3DSA:3.90.820.10 4 63 5.9E-24 T 28-03-2018 CI104_RS07290 611264ad39391f6eb54809a69eede03c 72 Pfam PF03621 MbtH-like protein 4 53 8.3E-21 T 28-03-2018 IPR005153 MbtH-like protein CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 294 306 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Pfam PF07724 AAA domain (Cdc48 subfamily) 596 760 2.0E-55 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 SUPERFAMILY SSF52540 159 545 9.6E-99 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Gene3D G3DSA:3.40.50.300 157 342 1.3E-25 T 28-03-2018 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 646 664 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 708 722 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 601 619 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 675 693 1.6E-42 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 ProSitePatterns PS00871 Chaperonins clpA/B signature 2. 631 649 - T 28-03-2018 IPR028299 ClpA/B, conserved site 2 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 766 845 3.2E-27 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 SMART SM01086 766 855 5.3E-36 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 SUPERFAMILY SSF81923 4 156 4.32E-43 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 203 337 1.5E-13 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 SMART SM00382 597 752 1.4E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 SMART SM00382 198 343 7.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 17 68 1.3E-13 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Pfam PF02861 Clp amino terminal domain, pathogenicity island component 94 145 9.3E-12 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Gene3D G3DSA:1.10.8.60 766 856 2.4E-23 T 28-03-2018 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 SUPERFAMILY SSF52540 546 853 1.41E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Gene3D G3DSA:1.10.1780.10 1 151 1.2E-32 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 TIGRFAM TIGR03346 chaperone_ClpB: ATP-dependent chaperone protein ClpB 6 854 0.0 T 28-03-2018 IPR017730 Chaperonin ClpB GO:0005737|GO:0009408|GO:0016485 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Gene3D G3DSA:3.40.50.300 552 765 1.0E-54 T 28-03-2018 CI104_RS18940 fd5cd633f44a8532aff2fc971c9253f5 857 Gene3D G3DSA:1.10.8.60 343 547 2.4E-44 T 28-03-2018 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 SMART SM00138 24 284 4.1E-125 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 Pfam PF01739 CheR methyltransferase, SAM binding domain 92 280 4.1E-59 T 28-03-2018 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 Gene3D G3DSA:1.10.155.10 16 90 4.1E-27 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 SUPERFAMILY SSF53335 92 281 3.11E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PIRSF PIRSF000410 9 285 8.5E-101 T 28-03-2018 IPR026024 Chemotaxis protein methyltransferase CheR CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 Gene3D G3DSA:3.40.50.150 91 284 2.1E-46 T 28-03-2018 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 SUPERFAMILY SSF47757 14 91 4.32E-25 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 Pfam PF03705 CheR methyltransferase, all-alpha domain 26 76 7.8E-19 T 28-03-2018 IPR022641 Chemotaxis receptor methyltransferase CheR, N-terminal CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PRINTS PR00996 Glutamate methyltransferase family signature 85 97 2.4E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PRINTS PR00996 Glutamate methyltransferase family signature 118 138 2.4E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PRINTS PR00996 Glutamate methyltransferase family signature 243 266 2.4E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PRINTS PR00996 Glutamate methyltransferase family signature 46 59 2.4E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PRINTS PR00996 Glutamate methyltransferase family signature 152 168 2.4E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS15490 2d4d30b8dc07d6fce0e4af5c598b084f 288 PRINTS PR00996 Glutamate methyltransferase family signature 224 238 2.4E-47 T 28-03-2018 IPR000780 MCP methyltransferase, CheR-type GO:0008757 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 PIRSF PIRSF000190 1 218 2.2E-85 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 TIGRFAM TIGR00558 pdxH: pyridoxamine 5'-phosphate oxidase 3 218 3.5E-101 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 Hamap MF_01629 Pyridoxine/pyridoxamine 5'-phosphate oxidase [pdxH]. 16 218 38.642 T 28-03-2018 IPR000659 Pyridoxamine 5'-phosphate oxidase GO:0004733|GO:0008615|GO:0010181 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 ProSitePatterns PS01064 Pyridoxamine 5'-phosphate oxidase signature. 188 201 - T 28-03-2018 IPR019740 Pyridoxamine 5'-phosphate oxidase, conserved site GO:0016638|GO:0055114 KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 SUPERFAMILY SSF50475 21 218 1.57E-67 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 Pfam PF01243 Pyridoxamine 5'-phosphate oxidase 41 122 3.6E-25 T 28-03-2018 IPR011576 Pyridoxamine 5'-phosphate oxidase, putative KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 Pfam PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region 178 218 1.2E-18 T 28-03-2018 IPR019576 Pyridoxine 5'-phosphate oxidase, dimerisation, C-terminal KEGG: 00750+1.4.3.5|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-964975 CI104_RS12465 3c5089068e1bae0007089891ac7c2604 218 Gene3D G3DSA:2.30.110.10 17 218 6.3E-70 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 Pfam PF05099 Tellurite resistance protein TerB 47 170 2.5E-9 T 28-03-2018 IPR007791 Co-chaperone DjlA, N-terminal CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 Hamap MF_01153 Co-chaperone protein DjlA [djlA]. 3 270 38.776 T 28-03-2018 IPR023749 Co-chaperone DjlA GO:0051087 CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 SMART SM00271 204 269 3.0E-16 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 Pfam PF00226 DnaJ domain 208 267 2.3E-10 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 SUPERFAMILY SSF46565 131 267 9.73E-31 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 Gene3D G3DSA:1.10.3680.10 41 168 8.9E-24 T 28-03-2018 IPR029024 TerB-like CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 PRINTS PR00625 DnaJ domain signature 207 225 5.9E-7 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 PRINTS PR00625 DnaJ domain signature 249 269 5.9E-7 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 PRINTS PR00625 DnaJ domain signature 225 240 5.9E-7 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04740 bfeee2a1aa81b4ac6a170983308a98ce 271 Gene3D G3DSA:1.10.287.110 169 269 4.3E-15 T 28-03-2018 IPR001623 DnaJ domain CI104_RS18150 bc1f5c1ce6f473c024daec101b883a8d 288 Pfam PF08543 Phosphomethylpyrimidine kinase 93 269 1.8E-21 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CI104_RS18150 bc1f5c1ce6f473c024daec101b883a8d 288 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 21 284 1.1E-50 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CI104_RS18150 bc1f5c1ce6f473c024daec101b883a8d 288 Gene3D G3DSA:3.40.1190.20 18 278 2.7E-44 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS18150 bc1f5c1ce6f473c024daec101b883a8d 288 SUPERFAMILY SSF53613 22 279 7.48E-58 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS14760 120f7c219a3fb3505cc821eaad39f05a 358 Pfam PF04865 Baseplate J-like protein 67 322 1.2E-52 T 28-03-2018 IPR006949 Baseplate protein J-like CI104_RS19965 f946d1b490e9b0eebf2ddfc9f1ab2430 201 SUPERFAMILY SSF52540 20 194 4.45E-36 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19965 f946d1b490e9b0eebf2ddfc9f1ab2430 201 Hamap MF_00065 Adenylyl-sulfate kinase [cysC]. 26 197 39.037 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CI104_RS19965 f946d1b490e9b0eebf2ddfc9f1ab2430 201 TIGRFAM TIGR00455 apsK: adenylyl-sulfate kinase 10 193 2.8E-89 T 28-03-2018 IPR002891 Adenylyl-sulfate kinase GO:0000103|GO:0004020|GO:0005524 KEGG: 00230+2.7.1.25|KEGG: 00920+2.7.1.25|MetaCyc: PWY-5340|Reactome: R-HSA-174362|Reactome: R-HSA-2408550 CI104_RS19965 f946d1b490e9b0eebf2ddfc9f1ab2430 201 Gene3D G3DSA:3.40.50.300 23 201 2.0E-48 T 28-03-2018 CI104_RS19965 f946d1b490e9b0eebf2ddfc9f1ab2430 201 Pfam PF01583 Adenylylsulphate kinase 27 179 1.3E-73 T 28-03-2018 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 Gene3D G3DSA:3.30.450.80 12 160 1.5E-20 T 28-03-2018 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 SUPERFAMILY SSF75516 15 157 1.15E-28 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 SUPERFAMILY SSF46894 161 228 1.12E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 Pfam PF03472 Autoinducer binding domain 17 150 3.4E-18 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 182 198 4.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 198 210 4.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 182 4.5E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 ProSitePatterns PS00622 LuxR-type HTH domain signature. 182 209 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 SMART SM00421 165 222 1.1E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 Pfam PF00196 Bacterial regulatory proteins, luxR family 168 220 7.4E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20665 3388fd951445bcaa93f54debdfc01162 230 Gene3D G3DSA:1.10.10.10 161 230 4.0E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24645 f3930dd0e1190e6a3aebf97f290acb3c 443 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 335 347 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CI104_RS24645 f3930dd0e1190e6a3aebf97f290acb3c 443 SUPERFAMILY SSF55920 163 438 1.44E-56 T 28-03-2018 IPR000994 Peptidase M24 CI104_RS24645 f3930dd0e1190e6a3aebf97f290acb3c 443 Hamap MF_01279 Xaa-Pro dipeptidase [pepQ]. 1 443 58.036 T 28-03-2018 IPR022846 Xaa-Pro dipeptidase GO:0016795 CI104_RS24645 f3930dd0e1190e6a3aebf97f290acb3c 443 Gene3D G3DSA:3.90.230.10 147 440 9.9E-54 T 28-03-2018 CI104_RS24645 f3930dd0e1190e6a3aebf97f290acb3c 443 Pfam PF00557 Metallopeptidase family M24 168 430 1.9E-46 T 28-03-2018 IPR000994 Peptidase M24 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 SUPERFAMILY SSF53335 2 260 3.33E-69 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 TIGRFAM TIGR00571 dam: DNA adenine methylase 1 259 1.2E-86 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 175 181 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 28 42 1.4E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 47 60 1.4E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 7 23 1.4E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 172 184 1.4E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 Gene3D G3DSA:3.40.50.150 148 260 1.2E-16 T 28-03-2018 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 Gene3D G3DSA:1.10.1020.10 54 147 3.3E-29 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 PIRSF PIRSF000398 1 262 3.5E-63 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CI104_RS03460 c35c0623e5d8088d163d24042cb7312b 285 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 7 243 3.1E-65 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 99 116 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 Gene3D G3DSA:2.60.40.10 26 144 4.1E-29 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 PRINTS PR00969 Pili chaperone signature 72 93 1.9E-24 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 PRINTS PR00969 Pili chaperone signature 100 117 1.9E-24 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 PRINTS PR00969 Pili chaperone signature 125 140 1.9E-24 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 PRINTS PR00969 Pili chaperone signature 165 180 1.9E-24 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 234 1.0E-10 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 Gene3D G3DSA:2.60.40.10 147 241 6.0E-20 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 SUPERFAMILY SSF49584 137 238 1.01E-13 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 26 143 6.1E-33 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS13680 d742f2b92109726e81c8bc6a7aabd306 244 SUPERFAMILY SSF49354 21 143 3.14E-34 T 28-03-2018 IPR008962 PapD-like CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 SUPERFAMILY SSF46894 164 240 3.1E-18 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 SUPERFAMILY SSF75516 8 170 3.53E-37 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 194 210 2.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 180 194 2.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 210 222 2.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 Gene3D G3DSA:1.10.10.10 165 240 3.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 Gene3D G3DSA:3.30.450.80 1 164 4.5E-43 T 28-03-2018 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 SMART SM00421 177 234 1.8E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 179 234 5.1E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 Pfam PF03472 Autoinducer binding domain 23 158 8.7E-35 T 28-03-2018 IPR005143 Transcription factor LuxR-like, autoinducer-binding domain CI104_RS15765 93e8048a4a8367eba5290597f046ae08 240 ProSitePatterns PS00622 LuxR-type HTH domain signature. 194 221 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS21535 92c88167b1235dfdb1a72962b9f9f1d8 396 Gene3D G3DSA:3.40.640.10 2 259 6.7E-36 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS21535 92c88167b1235dfdb1a72962b9f9f1d8 396 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 8 392 2.2E-111 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS21535 92c88167b1235dfdb1a72962b9f9f1d8 396 Gene3D G3DSA:3.90.1150.10 260 396 1.2E-35 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS21535 92c88167b1235dfdb1a72962b9f9f1d8 396 PIRSF PIRSF001434 1 396 2.4E-114 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS21535 92c88167b1235dfdb1a72962b9f9f1d8 396 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 9 395 6.7E-173 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CI104_RS21535 92c88167b1235dfdb1a72962b9f9f1d8 396 SUPERFAMILY SSF53383 26 394 1.69E-85 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS07745 a58fea1a4984d8d8bb93036ae3565e0c 148 Gene3D G3DSA:1.10.10.10 4 88 3.8E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07745 a58fea1a4984d8d8bb93036ae3565e0c 148 Pfam PF01475 Ferric uptake regulator family 10 130 3.4E-48 T 28-03-2018 IPR002481 Ferric-uptake regulator GO:0003700|GO:0006355 CI104_RS07745 a58fea1a4984d8d8bb93036ae3565e0c 148 SUPERFAMILY SSF46785 6 134 3.92E-45 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08145 bf0aa269d0f967010b7211767d947cfd 350 Pfam PF00793 DAHP synthetase I family 38 338 2.3E-109 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS08145 bf0aa269d0f967010b7211767d947cfd 350 SUPERFAMILY SSF51569 7 348 1.03E-139 T 28-03-2018 CI104_RS08145 bf0aa269d0f967010b7211767d947cfd 350 PIRSF PIRSF001361 1 350 1.2E-164 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CI104_RS08145 bf0aa269d0f967010b7211767d947cfd 350 Gene3D G3DSA:3.20.20.70 8 350 1.1E-134 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS08145 bf0aa269d0f967010b7211767d947cfd 350 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 6 349 3.4E-179 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CI104_RS15715 3cb8a663f3b87bf581776e3f17f800c2 120 Gene3D G3DSA:3.90.1720.10 2 110 2.3E-4 T 28-03-2018 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 186 196 - T 28-03-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 14 199 2.0E-109 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 PIRSF PIRSF000440 1 213 6.4E-87 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 Pfam PF00302 Chloramphenicol acetyltransferase 3 205 5.2E-98 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 SMART SM01059 1 205 2.0E-100 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 Gene3D G3DSA:3.30.559.10 1 210 7.9E-40 T 28-03-2018 CI104_RS27410 95d4b0e82e26fbef31ea77b8a02f4a99 213 SUPERFAMILY SSF52777 1 210 8.9E-75 T 28-03-2018 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 ProSitePatterns PS00100 Chloramphenicol acetyltransferase active site. 186 196 - T 28-03-2018 IPR018372 Chloramphenicol acetyltransferase, active site GO:0008811 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 ProDom PD002660 TRANSFERASE CHLORAMPHENICOL ACYLTRANSFERASE ACETYLTRANSFERASE ANTIBIOTIC RESISTANCE PLASMID CAT O-ACETYLTRANSFERASE DIRECT 14 199 2.0E-109 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 PIRSF PIRSF000440 1 213 6.4E-87 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 Pfam PF00302 Chloramphenicol acetyltransferase 3 205 5.2E-98 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 SMART SM01059 1 205 2.0E-100 T 28-03-2018 IPR001707 Chloramphenicol acetyltransferase GO:0008811 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 Gene3D G3DSA:3.30.559.10 1 210 7.9E-40 T 28-03-2018 CI104_RS26930 95d4b0e82e26fbef31ea77b8a02f4a99 213 SUPERFAMILY SSF52777 1 210 8.9E-75 T 28-03-2018 CI104_RS20865 ae123df1d11d60bdef226497d412c443 120 Pfam PF06953 Arsenical resistance operon trans-acting repressor ArsD 1 120 7.5E-48 T 28-03-2018 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD GO:0003677|GO:0045892|GO:0046685 CI104_RS01605 50f9874901ea153fb525d30e5d2c0206 276 SUPERFAMILY SSF144091 92 267 6.67E-45 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CI104_RS01605 50f9874901ea153fb525d30e5d2c0206 276 Hamap MF_01594 Rhomboid protease GlpG [glpG]. 1 274 45.476 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CI104_RS01605 50f9874901ea153fb525d30e5d2c0206 276 Pfam PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease 1 82 1.5E-28 T 28-03-2018 IPR022732 Peptidase S54, GlpG peptidase, N-terminal GO:0004252|GO:0016021 CI104_RS01605 50f9874901ea153fb525d30e5d2c0206 276 TIGRFAM TIGR04239 rhombo_GlpG: rhomboid family protease GlpG 4 269 1.5E-116 T 28-03-2018 IPR023662 Rhomboid protease GlpG GO:0004252|GO:0006508|GO:0016021 CI104_RS01605 50f9874901ea153fb525d30e5d2c0206 276 Gene3D G3DSA:1.20.1540.10 91 268 4.1E-38 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CI104_RS01605 50f9874901ea153fb525d30e5d2c0206 276 Pfam PF01694 Rhomboid family 132 267 2.7E-29 T 28-03-2018 IPR022764 Peptidase S54, rhomboid domain GO:0004252|GO:0016021 CI104_RS01090 eb5160b10deaa3210653c949d2ac578e 309 Pfam PF00294 pfkB family carbohydrate kinase 3 304 4.0E-73 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS01090 eb5160b10deaa3210653c949d2ac578e 309 Gene3D G3DSA:3.40.1190.20 1 309 1.8E-60 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS01090 eb5160b10deaa3210653c949d2ac578e 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS01090 eb5160b10deaa3210653c949d2ac578e 309 SUPERFAMILY SSF53613 2 303 5.77E-75 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 109 421 3.8E-104 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 Gene3D G3DSA:3.40.630.10 93 427 1.5E-112 T 28-03-2018 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 Hamap MF_00504 Peptidase B [pepB]. 3 427 64.709 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 PIRSF PIRSF036388 1 427 5.4E-237 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 SUPERFAMILY SSF53187 107 426 3.77E-103 T 28-03-2018 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 275 282 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 PRINTS PR00481 Cytosol aminopeptidase signature 190 207 3.4E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 PRINTS PR00481 Cytosol aminopeptidase signature 212 233 3.4E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 PRINTS PR00481 Cytosol aminopeptidase signature 249 270 3.4E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 PRINTS PR00481 Cytosol aminopeptidase signature 271 291 3.4E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 PRINTS PR00481 Cytosol aminopeptidase signature 299 314 3.4E-45 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS18585 44b0fd1cd09dc8e28b2b6984e357db12 427 Pfam PF12404 Peptidase 5 81 1.3E-32 T 28-03-2018 IPR008330 Peptidase M17, peptidase B GO:0004177|GO:0005737|GO:0006508|GO:0008235|GO:0030145 KEGG: 00480+3.4.11.23 CI104_RS06185 362dd1ac5e883c1792c9d21637d14024 286 Pfam PF01116 Fructose-bisphosphate aldolase class-II 3 285 4.7E-94 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS06185 362dd1ac5e883c1792c9d21637d14024 286 Gene3D G3DSA:3.20.20.70 1 286 1.4E-91 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS06185 362dd1ac5e883c1792c9d21637d14024 286 PIRSF PIRSF001359 1 286 2.1E-105 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS06185 362dd1ac5e883c1792c9d21637d14024 286 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 285 1.6E-96 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS06185 362dd1ac5e883c1792c9d21637d14024 286 SUPERFAMILY SSF51569 3 285 4.54E-91 T 28-03-2018 CI104_RS06185 362dd1ac5e883c1792c9d21637d14024 286 TIGRFAM TIGR01859 fruc_bis_ald_: fructose-1,6-bisphosphate aldolase, class II 2 285 1.9E-109 T 28-03-2018 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 GO:0004332|GO:0006096|GO:0008270|GO:0030388 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 Pfam PF14841 FliG middle domain 116 187 7.9E-24 T 28-03-2018 IPR032779 Flagellar motor switch protein FliG, middle domain CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 Gene3D G3DSA:1.10.220.30 5 67 3.4E-10 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PIRSF PIRSF003161 1 332 1.3E-117 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 Pfam PF14842 FliG N-terminal domain 5 104 3.9E-29 T 28-03-2018 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 Gene3D G3DSA:1.10.220.30 68 190 2.4E-21 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 Gene3D G3DSA:1.10.220.30 195 332 1.5E-29 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 SUPERFAMILY SSF48029 7 105 2.88E-18 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 SUPERFAMILY SSF48029 116 325 9.68E-63 T 28-03-2018 IPR011002 Flagellar motor switch protein FliG, alpha-helical CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 TIGRFAM TIGR00207 fliG: flagellar motor switch protein FliG 3 332 2.1E-150 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 Pfam PF01706 FliG C-terminal domain 219 324 2.2E-37 T 28-03-2018 IPR023087 Flagellar motor switch protein FliG, C-terminal CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 226 246 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 272 298 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 195 220 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 5 21 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 115 138 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 34 60 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS15850 00dc9821aa3387f3178c032b0aabe7de 332 PRINTS PR00954 Flagellar motor switch protein FliG signature 248 268 1.8E-75 T 28-03-2018 IPR000090 Flagellar motor switch protein FliG GO:0003774|GO:0006935|GO:0009288|GO:0071973 CI104_RS03685 16d84fd35789729e46ed09a38c2573de 205 TIGRFAM TIGR00101 ureG: urease accessory protein UreG 8 202 4.5E-101 T 28-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CI104_RS03685 16d84fd35789729e46ed09a38c2573de 205 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 10 178 3.0E-40 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CI104_RS03685 16d84fd35789729e46ed09a38c2573de 205 Hamap MF_01389 Urease accessory protein UreG [ureG]. 6 204 47.232 T 28-03-2018 IPR004400 Urease accessory protein UreG GO:0003924|GO:0006807|GO:0016151 CI104_RS03685 16d84fd35789729e46ed09a38c2573de 205 SUPERFAMILY SSF52540 4 199 6.82E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS03685 16d84fd35789729e46ed09a38c2573de 205 Gene3D G3DSA:3.40.50.300 8 176 6.2E-18 T 28-03-2018 CI104_RS03685 16d84fd35789729e46ed09a38c2573de 205 PIRSF PIRSF005624 2 204 3.0E-49 T 28-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CI104_RS27190 e3e41fb52b7aade30442775cb2ad25b9 340 Pfam PF02371 Transposase IS116/IS110/IS902 family 212 286 6.8E-27 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CI104_RS27190 e3e41fb52b7aade30442775cb2ad25b9 340 Pfam PF01548 Transposase 6 149 2.5E-18 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS27190 e3e41fb52b7aade30442775cb2ad25b9 340 Gene3D G3DSA:1.10.150.20 56 253 6.2E-4 T 28-03-2018 CI104_RS12255 3d714fe0881d4a1ac036e23cc1cb2ecf 261 SUPERFAMILY SSF81342 63 259 3.53E-24 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS12255 3d714fe0881d4a1ac036e23cc1cb2ecf 261 Pfam PF01292 Prokaryotic cytochrome b561 69 256 7.0E-26 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CI104_RS12255 3d714fe0881d4a1ac036e23cc1cb2ecf 261 Gene3D G3DSA:1.20.950.20 60 261 8.1E-34 T 28-03-2018 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 Gene3D G3DSA:1.10.287.950 207 314 1.0E-7 T 28-03-2018 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 Gene3D G3DSA:1.10.287.950 315 506 3.1E-41 T 28-03-2018 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 20 114 1.9E-11 T 28-03-2018 IPR000014 PAS domain CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 SMART SM00086 80 121 3.2E-5 T 28-03-2018 IPR001610 PAC motif CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 SUPERFAMILY SSF55785 21 114 1.22E-24 T 28-03-2018 IPR000014 PAS domain CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 Gene3D G3DSA:3.40.50.10600 3 129 5.3E-28 T 28-03-2018 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 320 474 1.3E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 Pfam PF08447 PAS fold 31 113 1.7E-14 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 SUPERFAMILY SSF58104 232 505 8.11E-62 T 28-03-2018 CI104_RS03365 6b561b4c9fd5793e794f2b5d7599812b 506 SMART SM00283 259 506 3.9E-88 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 Gene3D G3DSA:3.40.140.10 1 124 3.3E-33 T 28-03-2018 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 SUPERFAMILY SSF53597 144 362 5.59E-58 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 50 88 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 Gene3D G3DSA:3.40.430.10 125 367 2.3E-66 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 TIGRFAM TIGR00227 ribD_Cterm: riboflavin-specific deaminase C-terminal domain 146 365 1.1E-80 T 28-03-2018 IPR011549 Riboflavin-specific deaminase, C-terminal GO:0008703|GO:0009231|GO:0050661|GO:0055114 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 TIGRFAM TIGR00326 eubact_ribD: riboflavin biosynthesis protein RibD 7 362 1.2E-152 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 SUPERFAMILY SSF53927 3 145 6.2E-49 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 PIRSF PIRSF006769 1 367 3.2E-137 T 28-03-2018 IPR004794 Riboflavin biosynthesis protein RibD GO:0008835|GO:0009231|GO:0055114 KEGG: 00040+1.1.1.19|KEGG: 00053+1.1.1.19|KEGG: 00740+3.5.4.26+1.1.1.193|MetaCyc: PWY-5525 CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 Pfam PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region 2 99 8.7E-23 T 28-03-2018 IPR002125 Cytidine and deoxycytidylate deaminase domain CI104_RS06270 6b9700099e2afe1cefaaf481d80b0591 367 Pfam PF01872 RibD C-terminal domain 147 362 1.5E-60 T 28-03-2018 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal GO:0008703|GO:0009231|GO:0055114 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 SUPERFAMILY SSF158791 50 161 9.29E-24 T 28-03-2018 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 SUPERFAMILY SSF54631 164 303 3.77E-26 T 28-03-2018 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 Gene3D G3DSA:1.25.60.10 38 154 6.0E-17 T 28-03-2018 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 Pfam PF00571 CBS domain 229 283 3.3E-7 T 28-03-2018 IPR000644 CBS domain CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 TIGRFAM TIGR00400 mgtE: magnesium transporter 53 477 3.4E-74 T 28-03-2018 IPR006669 Magnesium transporter MgtE GO:0015095|GO:0015693|GO:0016020 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 Gene3D G3DSA:3.10.580.10 155 290 6.3E-17 T 28-03-2018 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 SMART SM00924 62 165 4.4E-30 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 Pfam PF03448 MgtE intracellular N domain 63 163 4.2E-24 T 28-03-2018 IPR006668 Magnesium transporter, MgtE intracellular domain CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 Gene3D G3DSA:1.10.357.20 305 478 1.5E-33 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 SUPERFAMILY SSF161093 306 477 7.98E-48 T 28-03-2018 CI104_RS17200 eb90e251ca94ec4a84ecbbc89a3488ca 478 Pfam PF01769 Divalent cation transporter 349 470 2.7E-23 T 28-03-2018 IPR006667 SLC41 divalent cation transporters, integral membrane domain GO:0006812|GO:0008324 CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 TIGRFAM TIGR00643 recG: ATP-dependent DNA helicase RecG 28 664 5.7E-250 T 28-03-2018 IPR004609 ATP-dependent DNA helicase RecG GO:0004003|GO:0006281|GO:0006310 CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Pfam PF00271 Helicase conserved C-terminal domain 480 588 7.0E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Gene3D G3DSA:3.40.50.300 457 630 5.9E-26 T 28-03-2018 CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Gene3D G3DSA:1.10.150.20 2 51 3.3E-4 T 28-03-2018 CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Gene3D G3DSA:2.40.50.140 52 141 7.9E-12 T 28-03-2018 CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 SUPERFAMILY SSF52540 204 453 1.83E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 SMART SM00490 505 589 8.3E-22 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Gene3D G3DSA:3.40.50.300 250 456 6.6E-36 T 28-03-2018 CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 SMART SM00487 265 459 2.2E-31 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 SUPERFAMILY SSF52540 508 653 1.3E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 SUPERFAMILY SSF52540 292 342 1.3E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 SUPERFAMILY SSF50249 9 176 2.06E-43 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Pfam PF17191 RecG wedge domain 14 171 8.1E-22 T 28-03-2018 IPR033454 RecG, wedge domain CI104_RS00445 d3725c3eedf9588404e400e32c028393 693 Pfam PF00270 DEAD/DEAH box helicase 292 433 5.3E-19 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS16700 ba555e73fa5ac92b412ab8d4cef82a45 369 SUPERFAMILY SSF117916 15 84 1.31E-5 T 28-03-2018 IPR034904 Fe-S cluster assembly domain CI104_RS16700 ba555e73fa5ac92b412ab8d4cef82a45 369 Gene3D G3DSA:3.40.50.300 92 328 2.3E-61 T 28-03-2018 CI104_RS16700 ba555e73fa5ac92b412ab8d4cef82a45 369 SUPERFAMILY SSF52540 108 355 5.33E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16700 ba555e73fa5ac92b412ab8d4cef82a45 369 Pfam PF10609 NUBPL iron-transfer P-loop NTPase 106 349 3.1E-100 T 28-03-2018 IPR033756 Flagellum site-determining protein YlxH/ Fe-S cluster assembling factor NBP35 CI104_RS16700 ba555e73fa5ac92b412ab8d4cef82a45 369 ProSitePatterns PS01215 Mrp family signature. 213 229 - T 28-03-2018 IPR000808 Mrp, conserved site GO:0005524 CI104_RS16700 ba555e73fa5ac92b412ab8d4cef82a45 369 Hamap MF_02040 Iron-sulfur cluster carrier protein. 101 350 37.491 T 28-03-2018 IPR019591 Mrp/NBP35 ATP-binding protein CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 Pfam PF01012 Electron transfer flavoprotein domain 27 168 1.0E-15 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 Gene3D G3DSA:3.40.50.1220 186 313 6.2E-47 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 PIRSF PIRSF000089 3 313 1.8E-83 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 SUPERFAMILY SSF52467 190 310 8.88E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 Hamap MF_01056 Protein FixB [fixB]. 1 313 58.226 T 28-03-2018 IPR023461 Electron transfer flavoprotein FixB subunit GO:0009437 CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 SUPERFAMILY SSF52402 6 175 3.84E-22 T 28-03-2018 CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 Gene3D G3DSA:3.40.50.620 2 181 2.4E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 255 281 - T 28-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 190 273 4.7E-29 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CI104_RS04665 539340f14237ed71e331e4cd2638fc0b 313 SMART SM00893 7 187 3.0E-13 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS04970 4525635e34a0a05956655468760fcb42 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 158 186 6.4E-14 T 28-03-2018 IPR003004 GspF/PilC family CI104_RS04970 4525635e34a0a05956655468760fcb42 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 377 396 6.4E-14 T 28-03-2018 IPR003004 GspF/PilC family CI104_RS04970 4525635e34a0a05956655468760fcb42 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 361 375 6.4E-14 T 28-03-2018 IPR003004 GspF/PilC family CI104_RS04970 4525635e34a0a05956655468760fcb42 400 PRINTS PR00812 Bacterial general secretion pathway protein F signature 59 71 6.4E-14 T 28-03-2018 IPR003004 GspF/PilC family CI104_RS04970 4525635e34a0a05956655468760fcb42 400 Pfam PF00482 Type II secretion system (T2SS), protein F 64 186 7.7E-30 T 28-03-2018 IPR018076 Type II secretion system F domain CI104_RS04970 4525635e34a0a05956655468760fcb42 400 Pfam PF00482 Type II secretion system (T2SS), protein F 269 388 9.4E-23 T 28-03-2018 IPR018076 Type II secretion system F domain CI104_RS04970 4525635e34a0a05956655468760fcb42 400 ProSitePatterns PS00874 Bacterial type II secretion system protein F signature. 158 186 - T 28-03-2018 IPR001992 Type II secretion system conserved site GO:0009306|GO:0016020 CI104_RS18030 ebae97eb6213808a5cbec2bd967d75c0 120 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 6 120 2.0E-53 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CI104_RS18030 ebae97eb6213808a5cbec2bd967d75c0 120 Gene3D G3DSA:1.10.10.10 3 65 1.7E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18030 ebae97eb6213808a5cbec2bd967d75c0 120 SUPERFAMILY SSF46955 3 54 2.11E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS18030 ebae97eb6213808a5cbec2bd967d75c0 120 Pfam PF07037 Putative transcription regulator (DUF1323) 6 119 1.3E-49 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CI104_RS09580 c8415b77d48c29f687b2952ac4791519 194 PIRSF PIRSF012337 1 192 8.2E-40 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CI104_RS09580 c8415b77d48c29f687b2952ac4791519 194 Pfam PF06890 Bacteriophage Mu Gp45 protein 19 172 3.1E-38 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CI104_RS09580 c8415b77d48c29f687b2952ac4791519 194 Gene3D G3DSA:2.40.50.230 17 80 4.3E-4 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS17305 9045e3f9f3871a58ec68c8eaebcde77f 242 Pfam PF13489 Methyltransferase domain 57 170 1.6E-24 T 28-03-2018 CI104_RS17305 9045e3f9f3871a58ec68c8eaebcde77f 242 TIGRFAM TIGR01983 UbiG: 3-demethylubiquinone-9 3-O-methyltransferase 16 234 1.8E-90 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CI104_RS17305 9045e3f9f3871a58ec68c8eaebcde77f 242 SUPERFAMILY SSF53335 17 222 1.66E-42 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS17305 9045e3f9f3871a58ec68c8eaebcde77f 242 Hamap MF_00472 Ubiquinone biosynthesis O-methyltransferase [ubiG]. 14 240 37.886 T 28-03-2018 IPR010233 Ubiquinone biosynthesis O-methyltransferase GO:0006744|GO:0008425 KEGG: 00130+2.1.1.222+2.1.1.64|KEGG: 00340+2.1.1.22|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-5870|MetaCyc: PWY-5871|MetaCyc: PWY-5872|MetaCyc: PWY-5873|MetaCyc: PWY-6708|MetaCyc: PWY-7230|MetaCyc: PWY-7233|Reactome: R-HSA-2142789 CI104_RS17305 9045e3f9f3871a58ec68c8eaebcde77f 242 Gene3D G3DSA:3.40.50.150 5 239 1.2E-44 T 28-03-2018 CI104_RS03500 212dddccad13e8005673cfd59736e91c 588 Gene3D G3DSA:1.10.10.60 10 92 1.1E-5 T 28-03-2018 CI104_RS03500 212dddccad13e8005673cfd59736e91c 588 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 11 68 6.5E-26 T 28-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 CI104_RS03500 212dddccad13e8005673cfd59736e91c 588 Pfam PF17289 Terminase RNaseH-like domain 410 571 1.0E-44 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like CI104_RS03500 212dddccad13e8005673cfd59736e91c 588 Pfam PF03237 Terminase-like family 162 382 4.6E-62 T 28-03-2018 CI104_RS08285 2f2d212ef31af82cbf5112aceb4c301f 228 PIRSF PIRSF006755 1 227 1.2E-82 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CI104_RS08285 2f2d212ef31af82cbf5112aceb4c301f 228 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 212 30.367 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CI104_RS08285 2f2d212ef31af82cbf5112aceb4c301f 228 SUPERFAMILY SSF52540 3 209 1.28E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08285 2f2d212ef31af82cbf5112aceb4c301f 228 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 176 1.1E-63 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CI104_RS08285 2f2d212ef31af82cbf5112aceb4c301f 228 Gene3D G3DSA:3.40.50.300 1 218 7.9E-57 T 28-03-2018 CI104_RS08285 2f2d212ef31af82cbf5112aceb4c301f 228 Pfam PF13500 AAA domain 3 208 8.5E-39 T 28-03-2018 CI104_RS24315 f585ed80b67da833d835d36c8e658a1e 463 Gene3D G3DSA:1.20.1600.10 7 310 1.5E-4 T 28-03-2018 CI104_RS24315 f585ed80b67da833d835d36c8e658a1e 463 SUPERFAMILY SSF56935 101 463 1.59E-6 T 28-03-2018 CI104_RS24315 f585ed80b67da833d835d36c8e658a1e 463 Pfam PF11471 Maltoporin periplasmic N-terminal extension 1 54 2.0E-14 T 28-03-2018 IPR021570 LamB-type porin N-terminal domain CI104_RS24315 f585ed80b67da833d835d36c8e658a1e 463 Pfam PF16966 Porin-like glycoporin RafY 104 463 1.2E-168 T 28-03-2018 IPR016963 Glycoporin RafY CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 Pfam PF01435 Peptidase family M48 78 258 2.8E-24 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 SUPERFAMILY SSF48452 310 427 2.05E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 Gene3D G3DSA:1.25.20.10 376 484 9.7E-9 T 28-03-2018 CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 Gene3D G3DSA:1.25.40.10 310 375 1.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 Pfam PF14559 Tetratricopeptide repeat 354 418 3.3E-9 T 28-03-2018 CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 Hamap MF_00997 Beta-barrel assembly-enhancing protease [bepA]. 4 484 41.773 T 28-03-2018 IPR030873 Beta-barrel assembly-enhancing protease GO:0006508|GO:0008237|GO:0016020|GO:0061077 CI104_RS18420 e614d6a5ee0682e9c0f3ba0f8d7567d7 487 Gene3D G3DSA:3.30.2010.10 68 154 1.3E-15 T 28-03-2018 CI104_RS16665 8f3b6733b5c6193e7befc9c97e74f2c9 321 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 263 276 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16665 8f3b6733b5c6193e7befc9c97e74f2c9 321 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 53 77 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16665 8f3b6733b5c6193e7befc9c97e74f2c9 321 SUPERFAMILY SSF53613 18 305 1.71E-54 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16665 8f3b6733b5c6193e7befc9c97e74f2c9 321 Pfam PF00294 pfkB family carbohydrate kinase 19 305 4.4E-50 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS16665 8f3b6733b5c6193e7befc9c97e74f2c9 321 Gene3D G3DSA:3.40.1190.20 15 320 7.1E-46 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS11265 0e0ad06b4873a33ce3116c8d5d3f8bc3 262 Pfam PF03864 Phage major capsid protein E 1 260 5.4E-46 T 28-03-2018 IPR005564 Major capsid protein GpE GO:0019028 CI104_RS11265 0e0ad06b4873a33ce3116c8d5d3f8bc3 262 Gene3D G3DSA:3.90.1690.10 1 262 6.9E-52 T 28-03-2018 CI104_RS16440 f1eac8e9701b09ea4c357cd956a4ba2c 344 Pfam PF02719 Polysaccharide biosynthesis protein 7 282 2.8E-105 T 28-03-2018 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CI104_RS16440 f1eac8e9701b09ea4c357cd956a4ba2c 344 SUPERFAMILY SSF51735 1 260 5.6E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16440 f1eac8e9701b09ea4c357cd956a4ba2c 344 TIGRFAM TIGR04130 FnlA: UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase 1 334 9.6E-224 T 28-03-2018 IPR026415 UDP-N-acetylglucosamine 4,6-dehydratase/5-epimerase CI104_RS16440 f1eac8e9701b09ea4c357cd956a4ba2c 344 Gene3D G3DSA:3.40.50.720 1 331 4.2E-67 T 28-03-2018 CI104_RS16440 f1eac8e9701b09ea4c357cd956a4ba2c 344 Pfam PF08485 Polysaccharide biosynthesis protein C-terminal 285 332 1.3E-24 T 28-03-2018 IPR013692 UDP-glucose 4-epimerase CapD, C-terminal domain GO:0003978|GO:0009103 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344 CI104_RS20125 0faca95206654d953507892084e112eb 455 SUPERFAMILY SSF143548 16 158 8.37E-46 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CI104_RS20125 0faca95206654d953507892084e112eb 455 Pfam PF03315 Serine dehydratase beta chain 3 155 8.1E-56 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CI104_RS20125 0faca95206654d953507892084e112eb 455 Gene3D G3DSA:3.30.1330.90 10 158 6.6E-51 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CI104_RS20125 0faca95206654d953507892084e112eb 455 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 3.2E-221 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CI104_RS20125 0faca95206654d953507892084e112eb 455 Gene3D G3DSA:1.10.4100.10 257 445 4.2E-33 T 28-03-2018 CI104_RS20125 0faca95206654d953507892084e112eb 455 Pfam PF03313 Serine dehydratase alpha chain 184 448 1.0E-94 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CI104_RS24085 f849475ff0ffdd35192584d632333477 70 Hamap MF_00501 50S ribosomal protein L31 [rpmE]. 1 68 32.2 T 28-03-2018 IPR027491 Ribosomal protein L31 type A GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 PRINTS PR01249 Ribosomal protein L31 signature 2 19 5.0E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 PRINTS PR01249 Ribosomal protein L31 signature 46 64 5.0E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 PRINTS PR01249 Ribosomal protein L31 signature 31 46 5.0E-23 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 Pfam PF01197 Ribosomal protein L31 1 65 1.2E-30 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 SUPERFAMILY SSF143800 1 66 5.89E-28 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 ProSitePatterns PS01143 Ribosomal protein L31 signature. 35 56 - T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS24085 f849475ff0ffdd35192584d632333477 70 TIGRFAM TIGR00105 L31: ribosomal protein bL31 1 66 1.5E-35 T 28-03-2018 IPR002150 Ribosomal protein L31 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS15245 e431dc9395dededc8de62d16dbf4c609 63 Pfam PF07358 Protein of unknown function (DUF1482) 1 57 1.3E-33 T 28-03-2018 IPR009954 Protein of unknown function DUF1482 CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 159 175 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 Gene3D G3DSA:3.40.47.10 1 263 1.1E-51 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 259 373 8.7E-29 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 SMART SM00825 Beta-ketoacyl synthase 10 416 1.9E-7 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 SUPERFAMILY SSF53901 219 415 2.64E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 SUPERFAMILY SSF53901 8 256 8.9E-49 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 Gene3D G3DSA:3.40.47.10 267 417 7.5E-40 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS22840 1a6a7a9efd0555fbdc90218d5b57b960 417 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 8 249 3.7E-35 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CI104_RS12225 f6819074c144f583193385bfd4653e85 200 Pfam PF00196 Bacterial regulatory proteins, luxR family 135 188 4.2E-17 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 ProSitePatterns PS00622 LuxR-type HTH domain signature. 150 177 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 166 178 8.3E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 136 150 8.3E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 150 166 8.3E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 SUPERFAMILY SSF52172 5 151 4.98E-29 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS12225 f6819074c144f583193385bfd4653e85 200 Gene3D G3DSA:1.10.10.10 121 189 8.8E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12225 f6819074c144f583193385bfd4653e85 200 SMART SM00421 133 190 4.9E-18 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 SMART SM00448 2 113 1.3E-18 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 Gene3D G3DSA:3.40.50.2300 2 120 6.5E-24 T 28-03-2018 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 Pfam PF00072 Response regulator receiver domain 4 113 2.8E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS12225 f6819074c144f583193385bfd4653e85 200 SUPERFAMILY SSF46894 133 193 1.25E-14 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS22395 992b16c36f8a5e5f51e3d65923e98c6b 206 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 117 203 4.5E-28 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CI104_RS22395 992b16c36f8a5e5f51e3d65923e98c6b 206 Gene3D G3DSA:1.10.287.460 1 90 1.1E-17 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CI104_RS22395 992b16c36f8a5e5f51e3d65923e98c6b 206 Gene3D G3DSA:3.10.50.40 91 206 3.9E-41 T 28-03-2018 CI104_RS22395 992b16c36f8a5e5f51e3d65923e98c6b 206 SUPERFAMILY SSF54534 8 205 9.82E-56 T 28-03-2018 CI104_RS22395 992b16c36f8a5e5f51e3d65923e98c6b 206 Pfam PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase 3 108 5.7E-22 T 28-03-2018 IPR000774 Peptidyl-prolyl cis-trans isomerase, FKBP-type, N-terminal GO:0006457 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 Pfam PF02881 SRP54-type protein, helical bundle domain 204 269 4.9E-14 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 ProSitePatterns PS00300 SRP54-type proteins GTP-binding domain signature. 461 474 - T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 SMART SM00963 193 273 1.5E-24 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 Gene3D G3DSA:1.20.120.140 180 271 3.6E-23 T 28-03-2018 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 Pfam PF00448 SRP54-type protein, GTPase domain 287 487 2.5E-79 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 TIGRFAM TIGR00064 ftsY: signal recognition particle-docking protein FtsY 216 487 2.4E-116 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 Gene3D G3DSA:3.40.50.300 280 489 4.5E-41 T 28-03-2018 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 SMART SM00962 287 488 5.6E-126 T 28-03-2018 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 SUPERFAMILY SSF47364 188 267 1.07E-22 T 28-03-2018 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle GO:0005525|GO:0006614 Reactome: R-HSA-1799339 CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 SUPERFAMILY SSF52540 280 487 1.88E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 SMART SM00382 286 477 9.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01400 0f70a175f914f2a27e0093aa2920853f 491 Hamap MF_00920 Signal recognition particle receptor FtsY [ftsY]. 216 488 65.533 T 28-03-2018 IPR004390 Signal-recognition particle receptor FtsY GO:0006614 CI104_RS08355 4f9f535132396804f16f79ec56d027e8 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 290 309 2.3E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS08355 4f9f535132396804f16f79ec56d027e8 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 253 277 2.3E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS08355 4f9f535132396804f16f79ec56d027e8 368 PRINTS PR00164 ABC-2 type transport system membrane protein signature 310 329 2.3E-6 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS08355 4f9f535132396804f16f79ec56d027e8 368 Pfam PF12698 ABC-2 family transporter protein 25 359 5.1E-47 T 28-03-2018 CI104_RS08355 4f9f535132396804f16f79ec56d027e8 368 Gene3D G3DSA:3.40.1710.10 38 188 1.0E-24 T 28-03-2018 CI104_RS28635 4e7d54bbd0fa831716749d92519fded9 434 Pfam PF13518 Helix-turn-helix domain 38 97 2.6E-10 T 28-03-2018 CI104_RS28635 4e7d54bbd0fa831716749d92519fded9 434 SUPERFAMILY SSF53098 182 380 6.53E-21 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28635 4e7d54bbd0fa831716749d92519fded9 434 Gene3D G3DSA:1.10.10.60 106 168 9.9E-15 T 28-03-2018 CI104_RS28635 4e7d54bbd0fa831716749d92519fded9 434 Pfam PF00665 Integrase core domain 186 324 2.5E-24 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS28635 4e7d54bbd0fa831716749d92519fded9 434 Gene3D G3DSA:3.30.420.10 183 401 3.7E-38 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 Gene3D G3DSA:3.30.420.10 2 159 8.2E-52 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 SUPERFAMILY SSF53098 3 156 1.14E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 Hamap MF_00034 Crossover junction endodeoxyribonuclease RuvC [ruvC]. 2 153 46.727 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 TIGRFAM TIGR00228 ruvC: crossover junction endodeoxyribonuclease RuvC 4 159 2.4E-87 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 83 99 7.3E-45 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 5 18 7.3E-45 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 61 77 7.3E-45 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 107 126 7.3E-45 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 PRINTS PR00696 Crossover junction endodeoxyribonuclease RUVC signature 138 150 7.3E-45 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 Pfam PF02075 Crossover junction endodeoxyribonuclease RuvC 4 150 6.4E-69 T 28-03-2018 IPR002176 Crossover junction endodeoxyribonuclease RuvC GO:0004520|GO:0006281|GO:0006310 CI104_RS15370 90c3dde7d3006bdd3ae02cb5f8c01fa6 173 ProSitePatterns PS01321 Crossover junction endodeoxyribonuclease ruvC signature. 113 147 - T 28-03-2018 IPR020563 Crossover junction endodeoxyribonuclease RuvC, magnesium-binding site GO:0008821 CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 SUPERFAMILY SSF52540 278 486 1.49E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 ProSitePatterns PS00211 ABC transporters family signature. 407 421 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 Gene3D G3DSA:3.40.50.300 263 500 3.4E-36 T 28-03-2018 CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 Pfam PF00005 ABC transporter 280 434 9.0E-21 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 Pfam PF00005 ABC transporter 29 180 7.0E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 SUPERFAMILY SSF52540 12 233 3.39E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 SMART SM00382 38 228 1.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 SMART SM00382 288 483 0.23 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23935 b257632f57a2c0903bdf69f4b84734fb 504 Gene3D G3DSA:3.40.50.300 11 257 5.9E-55 T 28-03-2018 CI104_RS00185 37b80f29d0d46b6a4f715a85630e0d7e 437 Gene3D G3DSA:1.20.1250.20 238 427 6.0E-21 T 28-03-2018 CI104_RS00185 37b80f29d0d46b6a4f715a85630e0d7e 437 Gene3D G3DSA:1.20.1250.20 15 237 1.2E-18 T 28-03-2018 CI104_RS00185 37b80f29d0d46b6a4f715a85630e0d7e 437 SUPERFAMILY SSF103473 13 424 6.02E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00185 37b80f29d0d46b6a4f715a85630e0d7e 437 Pfam PF07690 Major Facilitator Superfamily 45 274 3.7E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00185 37b80f29d0d46b6a4f715a85630e0d7e 437 TIGRFAM TIGR00885 fucP: L-fucose:H+ symporter permease 21 424 1.5E-97 T 28-03-2018 IPR005275 L-fucose permease FucP GO:0015150|GO:0015756 CI104_RS10085 c803dad8cc004232ea1833585db13a92 168 Gene3D G3DSA:3.40.30.10 28 155 5.0E-21 T 28-03-2018 CI104_RS10085 c803dad8cc004232ea1833585db13a92 168 SUPERFAMILY SSF52833 10 156 3.44E-26 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS10085 c803dad8cc004232ea1833585db13a92 168 Pfam PF08534 Redoxin 41 147 5.1E-13 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CI104_RS23325 eaac20cf23a9aca4bb5b20437800a7c1 237 Pfam PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) 12 220 1.3E-48 T 28-03-2018 IPR005519 Acid phosphatase, class B-like CI104_RS23325 eaac20cf23a9aca4bb5b20437800a7c1 237 Gene3D G3DSA:3.40.50.1000 27 237 4.2E-41 T 28-03-2018 IPR023214 HAD-like domain CI104_RS23325 eaac20cf23a9aca4bb5b20437800a7c1 237 PIRSF PIRSF017818 1 237 1.1E-120 T 28-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CI104_RS23325 eaac20cf23a9aca4bb5b20437800a7c1 237 TIGRFAM TIGR01672 AphA: HAD phosphatase, family IIIB 1 237 9.4E-121 T 28-03-2018 IPR010025 HAD-superfamily phosphatase, subfamily IIIB, AphA GO:0003993|GO:0030288 KEGG: 00740+3.1.3.2|MetaCyc: PWY-6348 CI104_RS23325 eaac20cf23a9aca4bb5b20437800a7c1 237 SUPERFAMILY SSF56784 31 237 2.57E-74 T 28-03-2018 IPR023214 HAD-like domain CI104_RS04965 c5123dde639f005f0104637b076aa053 347 Gene3D G3DSA:3.20.20.70 8 341 3.8E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 TIGRFAM TIGR01305 GMP_reduct_1: guanosine monophosphate reductase 2 344 1.9E-208 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 ProSitePatterns PS00487 IMP dehydrogenase / GMP reductase signature. 176 188 - T 28-03-2018 IPR015875 IMP dehydrogenase / GMP reductase, conserved site GO:0016491|GO:0055114 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 PIRSF PIRSF000235 1 347 1.0E-198 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 SMART SM01240 7 344 1.8E-138 T 28-03-2018 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 Hamap MF_00596 GMP reductase [guaC]. 1 345 55.758 T 28-03-2018 IPR005993 GMP reductase GO:0003920|GO:0009117|GO:1902560 KEGG: 00230+1.7.1.7|Reactome: R-HSA-74217 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 Pfam PF00478 IMP dehydrogenase / GMP reductase domain 9 338 5.2E-78 T 28-03-2018 IPR001093 IMP dehydrogenase/GMP reductase GO:0003824|GO:0055114 CI104_RS04965 c5123dde639f005f0104637b076aa053 347 SUPERFAMILY SSF51412 6 336 2.49E-99 T 28-03-2018 CI104_RS17735 1db897992df91910550507a19072ebad 270 Pfam PF01416 tRNA pseudouridine synthase 17 111 3.7E-9 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17735 1db897992df91910550507a19072ebad 270 Pfam PF01416 tRNA pseudouridine synthase 151 253 2.4E-28 T 28-03-2018 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17735 1db897992df91910550507a19072ebad 270 Gene3D G3DSA:3.30.70.660 114 251 5.2E-38 T 28-03-2018 IPR020095 Pseudouridine synthase I, TruA, C-terminal GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17735 1db897992df91910550507a19072ebad 270 Gene3D G3DSA:3.30.70.580 8 113 7.1E-35 T 28-03-2018 CI104_RS17735 1db897992df91910550507a19072ebad 270 SUPERFAMILY SSF55120 8 265 3.6E-93 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17735 1db897992df91910550507a19072ebad 270 Hamap MF_00171 tRNA pseudouridine synthase A [truA]. 10 252 35.902 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17735 1db897992df91910550507a19072ebad 270 TIGRFAM TIGR00071 hisT_truA: tRNA pseudouridine(38-40) synthase 10 247 1.4E-81 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17735 1db897992df91910550507a19072ebad 270 PIRSF PIRSF001430 9 261 3.9E-78 T 28-03-2018 IPR001406 Pseudouridine synthase I, TruA GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS23950 ef04af37fb07e38c7e9565b537864d7a 230 SUPERFAMILY SSF53639 3 222 2.16E-69 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS23950 ef04af37fb07e38c7e9565b537864d7a 230 SMART SM01007 6 197 2.8E-67 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS23950 ef04af37fb07e38c7e9565b537864d7a 230 Gene3D G3DSA:3.40.225.10 1 230 6.9E-57 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS23950 ef04af37fb07e38c7e9565b537864d7a 230 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 2 230 3.7E-127 T 28-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CI104_RS23950 ef04af37fb07e38c7e9565b537864d7a 230 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 7 195 1.3E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS19600 3d35827875acad1bdeb9671d0b941999 331 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 30 312 8.4E-53 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CI104_RS19600 3d35827875acad1bdeb9671d0b941999 331 Gene3D G3DSA:3.40.190.10 22 158 2.3E-15 T 28-03-2018 CI104_RS19600 3d35827875acad1bdeb9671d0b941999 331 Gene3D G3DSA:3.40.190.10 159 326 2.0E-35 T 28-03-2018 CI104_RS19600 3d35827875acad1bdeb9671d0b941999 331 SUPERFAMILY SSF53850 24 329 9.62E-92 T 28-03-2018 CI104_RS26105 db639c9b59e946c9b7aa1fb213978e16 269 Pfam PF01323 DSBA-like thioredoxin domain 101 263 3.0E-21 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CI104_RS26105 db639c9b59e946c9b7aa1fb213978e16 269 Gene3D G3DSA:3.40.30.10 79 269 3.9E-21 T 28-03-2018 CI104_RS26105 db639c9b59e946c9b7aa1fb213978e16 269 SUPERFAMILY SSF52833 78 264 1.84E-27 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 Gene3D G3DSA:2.40.100.10 13 190 2.7E-53 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 SUPERFAMILY SSF50891 26 189 1.46E-58 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 65 82 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 31 188 5.6E-50 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 70 82 1.5E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 44 59 1.5E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS01880 edfebfce0a3bcdbfc0534b76d32161d1 190 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 144 159 1.5E-10 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 5.9E-183 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 Gene3D G3DSA:3.40.50.1100 9 197 4.4E-42 T 28-03-2018 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 48.205 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 Gene3D G3DSA:3.40.50.1100 198 395 2.1E-34 T 28-03-2018 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 SUPERFAMILY SSF53686 6 390 3.54E-138 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 PIRSF PIRSF001413 2 397 2.0E-165 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21810 999c20dee7f74e97e256a3822f88aa3f 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 374 1.2E-46 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS13510 ec96e59ff41d9b7a0316ef97404c0b26 268 SUPERFAMILY SSF51366 3 264 1.48E-22 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS13510 ec96e59ff41d9b7a0316ef97404c0b26 268 ProDom PD011184 BTPA I PHOTOSYSTEM BIOGENESIS ASSEMBLY SGCQ TRIPHOSPHATASE NUCLEOSIDE PAE3553 ENZYME 35 207 1.0E-94 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CI104_RS13510 ec96e59ff41d9b7a0316ef97404c0b26 268 PIRSF PIRSF005956 2 268 6.3E-82 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CI104_RS13510 ec96e59ff41d9b7a0316ef97404c0b26 268 Gene3D G3DSA:3.20.20.380 3 268 7.5E-25 T 28-03-2018 CI104_RS13510 ec96e59ff41d9b7a0316ef97404c0b26 268 Pfam PF03437 BtpA family 10 265 1.9E-106 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CI104_RS13510 ec96e59ff41d9b7a0316ef97404c0b26 268 TIGRFAM TIGR00259 thylakoid_BtpA: membrane complex biogenesis protein, BtpA family 11 267 3.1E-120 T 28-03-2018 IPR005137 Membrane complex biogenesis protein, BtpA family CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 SMART SM00890 622 679 4.1E-29 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 745 756 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Pfam PF10371 Domain of unknown function 626 678 6.1E-23 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 SUPERFAMILY SSF52922 256 411 8.85E-43 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 TIGRFAM TIGR02176 pyruv_ox_red: pyruvate:ferredoxin (flavodoxin) oxidoreductase 1 1165 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 954 1066 2.9E-8 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Pfam PF17147 Pyruvate:ferredoxin oxidoreductase core domain II 265 347 8.9E-16 T 28-03-2018 IPR033412 Pyruvate:ferredoxin oxidoreductase, core domain II CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Pfam PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg 13 243 1.1E-80 T 28-03-2018 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Gene3D G3DSA:3.40.50.920 255 417 1.7E-41 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Pfam PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase 426 610 7.5E-35 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Pfam PF13484 4Fe-4S double cluster binding domain 689 757 3.8E-10 T 28-03-2018 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 PIRSF PIRSF000159 1 1174 0.0 T 28-03-2018 IPR011895 Pyruvate-flavodoxin oxidoreductase GO:0005506|GO:0016903|GO:0022900|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Gene3D G3DSA:3.40.920.10 418 624 1.5E-54 T 28-03-2018 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain GO:0016903|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 SUPERFAMILY SSF52518 2 254 3.83E-72 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Gene3D G3DSA:3.30.70.20 669 791 4.0E-29 T 28-03-2018 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 SUPERFAMILY SSF53323 419 668 1.1E-76 T 28-03-2018 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain GO:0016491|GO:0055114 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Gene3D G3DSA:3.40.50.970 793 1168 1.0E-104 T 28-03-2018 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 SUPERFAMILY SSF52518 794 1166 5.36E-118 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 SUPERFAMILY SSF54862 665 838 6.7E-23 T 28-03-2018 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Gene3D G3DSA:3.40.50.970 1 254 3.4E-48 T 28-03-2018 CI104_RS13725 4adec4376b7a7e391d8f9594732e2e1e 1174 Gene3D G3DSA:4.10.780.10 634 668 2.2E-15 T 28-03-2018 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain GO:0016903|GO:0055114 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 SUPERFAMILY SSF54631 255 369 1.34E-16 T 28-03-2018 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 SMART SM00116 263 311 2.5E-6 T 28-03-2018 IPR000644 CBS domain CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 Pfam PF00005 ABC transporter 22 168 3.6E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 Gene3D G3DSA:3.40.50.300 1 250 7.8E-72 T 28-03-2018 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 SUPERFAMILY SSF52540 1 244 3.43E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 Gene3D G3DSA:3.10.580.10 252 371 8.1E-14 T 28-03-2018 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 20 367 8.2E-105 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 SMART SM00382 31 218 5.9E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 Pfam PF00571 CBS domain 256 307 1.5E-6 T 28-03-2018 IPR000644 CBS domain CI104_RS12685 bebb8622d26167c6cb1c17e5033b6205 382 Pfam PF00571 CBS domain 325 368 0.0051 T 28-03-2018 IPR000644 CBS domain CI104_RS04495 e22379cb84ce4894126bc34e3557ae67 195 Pfam PF00994 Probable molybdopterin binding domain 8 147 8.9E-28 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS04495 e22379cb84ce4894126bc34e3557ae67 195 SMART SM00852 7 153 3.1E-21 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS04495 e22379cb84ce4894126bc34e3557ae67 195 SUPERFAMILY SSF53218 3 188 5.23E-47 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS04495 e22379cb84ce4894126bc34e3557ae67 195 ProSitePatterns PS01078 Molybdenum cofactor biosynthesis proteins signature 1. 69 82 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CI104_RS04495 e22379cb84ce4894126bc34e3557ae67 195 Gene3D G3DSA:3.40.980.10 1 188 8.1E-40 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS04495 e22379cb84ce4894126bc34e3557ae67 195 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 4 146 1.6E-39 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 TIGRFAM TIGR02051 MerR: Hg(II)-responsive transcriptional regulator 9 132 9.3E-56 T 28-03-2018 IPR011794 Hg(II)-responsive transcriptional regulator GO:0003677|GO:0006355|GO:0045340|GO:0046689 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 Pfam PF00376 MerR family regulatory protein 9 46 1.1E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 SMART SM00422 8 77 1.7E-30 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 Gene3D G3DSA:1.10.1660.10 4 63 1.8E-21 T 28-03-2018 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 Gene3D G3DSA:1.10.1660.10 64 142 1.8E-20 T 28-03-2018 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 44 64 3.9E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 9 20 3.9E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 20 33 3.9E-26 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 Pfam PF09278 MerR, DNA binding 51 113 4.3E-18 T 28-03-2018 IPR015358 Transcription regulator MerR, DNA binding CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 ProSitePatterns PS00552 MerR-type HTH domain signature. 11 33 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26585 5204afaa252b7d9f88291a91da04c2e3 151 SUPERFAMILY SSF46955 8 129 1.5E-29 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 48 61 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 244 3.8E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 Gene3D G3DSA:3.40.190.10 14 146 1.6E-38 T 28-03-2018 CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 SMART SM00062 26 246 1.6E-72 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 SMART SM00079 26 245 2.3E-7 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 Gene3D G3DSA:3.40.190.10 147 248 8.5E-18 T 28-03-2018 CI104_RS08460 dd73eb0982f74240f3f46f7deeddbe7e 248 SUPERFAMILY SSF53850 8 245 3.32E-74 T 28-03-2018 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 Gene3D G3DSA:1.20.1330.10 219 517 1.3E-20 T 28-03-2018 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 Gene3D G3DSA:1.20.1330.10 40 217 8.8E-52 T 28-03-2018 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 PRINTS PR00207 Flagellin signature 37 54 1.3E-31 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 PRINTS PR00207 Flagellin signature 111 134 1.3E-31 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 PRINTS PR00207 Flagellin signature 76 95 1.3E-31 T 28-03-2018 IPR001492 Flagellin GO:0005198|GO:0009420|GO:0071973 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 Pfam PF00700 Bacterial flagellin C-terminal helical region 460 544 2.4E-30 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 Pfam PF00669 Bacterial flagellin N-terminal helical region 5 143 3.7E-44 T 28-03-2018 IPR001029 Flagellin, D0/D1 domain GO:0005198|GO:0071973 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 SUPERFAMILY SSF64518 281 545 6.93E-107 T 28-03-2018 CI104_RS15800 aff4fe3dcd88ecada511ee89b079e527 545 SUPERFAMILY SSF64518 1 239 6.93E-107 T 28-03-2018 CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 Gene3D G3DSA:2.40.50.140 299 352 3.1E-15 T 28-03-2018 CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 Pfam PF00005 ABC transporter 21 161 4.6E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 Gene3D G3DSA:2.40.50.100 229 298 9.6E-7 T 28-03-2018 CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 SUPERFAMILY SSF50331 242 367 8.99E-21 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 SMART SM00382 29 216 1.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 SUPERFAMILY SSF52540 4 247 6.38E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 Gene3D G3DSA:3.40.50.300 2 228 5.1E-62 T 28-03-2018 CI104_RS03095 b842c98e46ad65b7227287852db5d724 370 Pfam PF08402 TOBE domain 287 359 7.0E-9 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS12850 1dd938d19df7a4998d6080ed01e7f17b 265 Gene3D G3DSA:3.40.50.300 9 264 1.4E-58 T 28-03-2018 CI104_RS12850 1dd938d19df7a4998d6080ed01e7f17b 265 Pfam PF00005 ABC transporter 40 194 2.4E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS12850 1dd938d19df7a4998d6080ed01e7f17b 265 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 242 264 1.0E-7 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CI104_RS12850 1dd938d19df7a4998d6080ed01e7f17b 265 SUPERFAMILY SSF52540 22 263 1.81E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12850 1dd938d19df7a4998d6080ed01e7f17b 265 TIGRFAM TIGR03411 urea_trans_UrtD: urea ABC transporter, ATP-binding protein UrtD 24 265 2.0E-111 T 28-03-2018 IPR017781 ABC transporter, urea, ATP-binding protein, UrtD CI104_RS05500 751a106a1edc352a89223a342e4b8609 266 SUPERFAMILY SSF56219 44 260 3.4E-26 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS05500 751a106a1edc352a89223a342e4b8609 266 Gene3D G3DSA:3.60.10.10 35 260 1.3E-16 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS05500 751a106a1edc352a89223a342e4b8609 266 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 49 252 4.4E-9 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS05500 751a106a1edc352a89223a342e4b8609 266 Hamap MF_01119 UPF0294 protein YafD [yafD]. 1 260 53.985 T 28-03-2018 IPR022958 Uncharacterised protein family UPF0294 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Gene3D G3DSA:3.30.70.270 37 113 1.9E-13 T 28-03-2018 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Gene3D G3DSA:3.30.70.270 114 172 4.9E-7 T 28-03-2018 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Pfam PF13438 Domain of unknown function (DUF4113) 368 417 1.8E-16 T 28-03-2018 IPR025188 Domain of unknown function DUF4113 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Pfam PF00817 impB/mucB/samB family 5 150 5.6E-29 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Pfam PF11799 impB/mucB/samB family C-terminal domain 240 353 1.4E-16 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 SUPERFAMILY SSF56672 1 235 2.4E-54 T 28-03-2018 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Gene3D G3DSA:3.30.1490.100 249 360 1.2E-17 T 28-03-2018 IPR017961 DNA polymerase, Y-family, little finger domain GO:0003684|GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS26110 e6c8714012781f573605dc4760d9d587 419 Gene3D G3DSA:1.10.150.20 173 248 7.7E-15 T 28-03-2018 CI104_RS13315 a9d5e196904ec1354a1f125a2d65fdbe 353 SUPERFAMILY SSF51004 39 337 4.19E-37 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CI104_RS13315 a9d5e196904ec1354a1f125a2d65fdbe 353 Gene3D G3DSA:2.130.10.10 31 353 1.7E-49 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 SUPERFAMILY SSF55234 88 155 1.83E-29 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 TIGRFAM TIGR00673 cynS: cyanase 1 156 5.6E-70 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 PIRSF PIRSF001263 3 156 9.5E-66 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 Gene3D G3DSA:3.30.1160.10 89 155 2.2E-35 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 Pfam PF02560 Cyanate lyase C-terminal domain 87 154 3.6E-32 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 Hamap MF_00535 Cyanate hydratase [cynS]. 1 156 76.315 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 SUPERFAMILY SSF47413 1 85 1.65E-20 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 Gene3D G3DSA:1.10.260.40 1 88 9.5E-9 T 28-03-2018 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 PRINTS PR01693 Cyanase signature 91 105 1.6E-35 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 PRINTS PR01693 Cyanase signature 109 125 1.6E-35 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 PRINTS PR01693 Cyanase signature 141 151 1.6E-35 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 PRINTS PR01693 Cyanase signature 22 37 1.6E-35 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 PRINTS PR01693 Cyanase signature 42 59 1.6E-35 T 28-03-2018 IPR008076 Cyanate hydratase GO:0008824|GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS17920 54d1960aaeb1d3d7c24063277566cb8b 156 SMART SM01116 83 156 3.3E-46 T 28-03-2018 IPR003712 Cyanate lyase, C-terminal GO:0009439 KEGG: 00400+4.2.1.10|KEGG: 00910+4.2.1.104|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS07355 86154ee97d42d997353cb7599c92dbbd 701 Pfam PF02554 Carbon starvation protein CstA 32 404 2.2E-168 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CI104_RS07355 86154ee97d42d997353cb7599c92dbbd 701 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 469 596 4.3E-35 T 28-03-2018 IPR025299 CstA, C-terminal domain CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 SUPERFAMILY SSF53850 21 326 2.21E-93 T 28-03-2018 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 Pfam PF13531 Bacterial extracellular solute-binding protein 32 280 2.2E-46 T 28-03-2018 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 145 153 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 Gene3D G3DSA:3.40.190.10 20 125 1.7E-25 T 28-03-2018 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 Gene3D G3DSA:3.40.190.10 247 329 4.3E-27 T 28-03-2018 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 Gene3D G3DSA:3.40.190.10 126 246 1.4E-27 T 28-03-2018 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 12 326 7.8E-191 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CI104_RS24205 021ebd5de007596c4c4ff40e4694dcae 329 ProSitePatterns PS00401 Prokaryotic sulfate-binding proteins signature 1. 48 60 - T 28-03-2018 IPR000957 Sulphate/thiosulphate-binding, conserved site CI104_RS03085 c0d535bf9b27cfa03e3ee68e65232d25 306 Gene3D G3DSA:3.30.420.40 1 114 8.7E-19 T 28-03-2018 CI104_RS03085 c0d535bf9b27cfa03e3ee68e65232d25 306 SUPERFAMILY SSF53067 1 299 1.48E-53 T 28-03-2018 CI104_RS03085 c0d535bf9b27cfa03e3ee68e65232d25 306 Pfam PF00480 ROK family 3 298 9.0E-61 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS03085 c0d535bf9b27cfa03e3ee68e65232d25 306 Gene3D G3DSA:3.30.420.40 115 303 1.1E-44 T 28-03-2018 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 Gene3D G3DSA:3.30.450.20 28 177 1.2E-25 T 28-03-2018 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 367 470 1.8E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 SMART SM00387 363 473 5.4E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 SUPERFAMILY SSF55874 320 472 2.23E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 Pfam PF00512 His Kinase A (phospho-acceptor) domain 259 319 6.5E-12 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 Gene3D G3DSA:3.30.565.10 315 472 1.0E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 SMART SM00388 255 320 6.9E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 SUPERFAMILY SSF103190 65 177 2.39E-13 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 418 428 5.1E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 414 5.1E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 PRINTS PR00344 Bacterial sensor protein C-terminal signature 433 451 5.1E-6 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 Gene3D G3DSA:1.10.287.130 235 314 3.0E-9 T 28-03-2018 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 SMART SM00304 204 255 9.5E-5 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 SUPERFAMILY SSF47384 241 320 3.34E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS04435 6e7829c5a4110cc62345418498cbb3de 474 Pfam PF17203 Single cache domain 3 35 168 2.3E-7 T 28-03-2018 IPR033463 Single cache domain 3 CI104_RS01585 9e4dd9d999135bfadceeb2344be7b351 443 Pfam PF07690 Major Facilitator Superfamily 22 380 1.8E-55 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS01585 9e4dd9d999135bfadceeb2344be7b351 443 SUPERFAMILY SSF103473 5 417 3.01E-84 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS01585 9e4dd9d999135bfadceeb2344be7b351 443 Gene3D G3DSA:1.20.1250.20 226 425 2.8E-22 T 28-03-2018 CI104_RS01585 9e4dd9d999135bfadceeb2344be7b351 443 Gene3D G3DSA:1.20.1250.20 6 210 3.6E-37 T 28-03-2018 CI104_RS28035 1599b5d08c8906d2a5e0c8a0122d7e00 288 Gene3D G3DSA:1.10.10.10 204 284 9.7E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28035 1599b5d08c8906d2a5e0c8a0122d7e00 288 SUPERFAMILY SSF46785 65 191 1.03E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28035 1599b5d08c8906d2a5e0c8a0122d7e00 288 Pfam PF01051 Initiator Replication protein 65 278 1.1E-46 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CI104_RS28035 1599b5d08c8906d2a5e0c8a0122d7e00 288 SUPERFAMILY SSF46785 192 282 2.58E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28035 1599b5d08c8906d2a5e0c8a0122d7e00 288 Gene3D G3DSA:1.10.10.10 56 203 3.0E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03390 6998289f3db1d100159b4602ba40e880 160 Gene3D G3DSA:2.30.110.20 1 160 5.0E-48 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS03390 6998289f3db1d100159b4602ba40e880 160 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 160 9.0E-46 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS03390 6998289f3db1d100159b4602ba40e880 160 Pfam PF05638 Type VI secretion system effector, Hcp 6 146 4.4E-33 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS03390 6998289f3db1d100159b4602ba40e880 160 SUPERFAMILY SSF141452 2 159 7.32E-42 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS00480 3e5e5b09717bebe26c76829b7dd0aa1d 287 TIGRFAM TIGR00255 TIGR00255: TIGR00255 family protein 1 287 2.1E-137 T 28-03-2018 IPR005229 Conserved hypothetical protein CHP00255 CI104_RS00480 3e5e5b09717bebe26c76829b7dd0aa1d 287 Pfam PF08340 Domain of unknown function (DUF1732) 203 287 2.6E-34 T 28-03-2018 IPR013551 Domain of unknown function DUF1732 CI104_RS00480 3e5e5b09717bebe26c76829b7dd0aa1d 287 Pfam PF03755 YicC-like family, N-terminal region 2 153 6.1E-44 T 28-03-2018 IPR013527 YicC-like, N-terminal CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 SMART SM00304 66 118 0.0088 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 179 332 3.3E-51 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 5 30 3.0E-6 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 308 337 3.0E-6 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 SUPERFAMILY SSF58104 86 367 1.96E-67 T 28-03-2018 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 SMART SM00283 119 366 2.3E-81 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 Gene3D G3DSA:1.10.287.950 175 370 1.0E-48 T 28-03-2018 CI104_RS22235 81e05bea97852a4d5dbaf8d69ded536b 370 Gene3D G3DSA:1.10.287.950 64 174 4.2E-15 T 28-03-2018 CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 127 141 2.7E-8 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 334 351 2.7E-8 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 353 371 2.7E-8 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 SUPERFAMILY SSF53335 113 395 3.04E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 Pfam PF14338 Mrr N-terminal domain 20 90 1.1E-7 T 28-03-2018 IPR025745 Restriction system protein Mrr-like N-terminal domain CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 Pfam PF01555 DNA methylase 128 389 5.1E-20 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 132 137 - T 28-03-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CI104_RS27005 3063f4ca03cbb16c03404056c207ee81 416 Gene3D G3DSA:3.40.50.150 113 398 3.2E-25 T 28-03-2018 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 PIRSF PIRSF006621 1 327 2.5E-71 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 Gene3D G3DSA:3.20.20.70 10 251 2.3E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 TIGRFAM TIGR00742 yjbN: tRNA dihydrouridine synthase A 13 328 8.3E-172 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 Hamap MF_02041 tRNA-dihydrouridine(20/20a) synthase [dusA]. 4 329 53.105 T 28-03-2018 IPR004653 tRNA-dihydrouridine(20/20a) synthase GO:0002943|GO:0017150 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 Pfam PF01207 Dihydrouridine synthase (Dus) 16 325 2.6E-98 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS23355 e4151f148329b1972583d3779a56ec6c 331 SUPERFAMILY SSF51395 12 321 1.22E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 177 202 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 408 423 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 141 150 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 430 450 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 308 315 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 8 30 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 343 364 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 41 56 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 265 279 6.6E-70 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 Gene3D G3DSA:3.30.390.30 335 462 4.0E-37 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 TIGRFAM TIGR01350 lipoamide_DH: dihydrolipoyl dehydrogenase 7 460 3.7E-150 T 28-03-2018 IPR006258 Dihydrolipoamide dehydrogenase GO:0004148|GO:0050660|GO:0055114 KEGG: 00010+1.8.1.4|KEGG: 00020+1.8.1.4|KEGG: 00260+1.8.1.4|KEGG: 00280+1.8.1.4|KEGG: 00620+1.8.1.4|KEGG: 00640+1.8.1.4|MetaCyc: PWY-5046|MetaCyc: PWY-5084|Reactome: R-HSA-204174|Reactome: R-HSA-389661|Reactome: R-HSA-5362517|Reactome: R-HSA-6783984|Reactome: R-HSA-70268|Reactome: R-HSA-70895|Reactome: R-HSA-71064|Reactome: R-HSA-71403 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 Gene3D G3DSA:1.10.287.990 39 107 2.9E-20 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 Pfam PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain 347 455 3.6E-35 T 28-03-2018 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain GO:0045454|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 Gene3D G3DSA:3.50.50.60 238 334 7.8E-12 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PIRSF PIRSF000350 1 469 3.2E-87 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 ProSitePatterns PS00076 Pyridine nucleotide-disulphide oxidoreductases class-I active site. 42 52 - T 28-03-2018 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site GO:0016668|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 SUPERFAMILY SSF55424 343 466 1.55E-38 T 28-03-2018 IPR016156 FAD/NAD-linked reductase, dimerisation domain GO:0016491|GO:0050660|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 SUPERFAMILY SSF51905 2 337 7.41E-58 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 328 1.0E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 Gene3D G3DSA:3.50.50.60 118 237 1.5E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 3.8E-41 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 177 195 3.8E-41 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 264 280 3.8E-41 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 293 315 3.8E-41 T 28-03-2018 CI104_RS05020 74d4428f0772a3969fdadcc49df1ca07 475 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 138 156 3.8E-41 T 28-03-2018 CI104_RS27275 499fc8d841722d1ea14a66fbbe4ec061 326 Pfam PF01609 Transposase DDE domain 138 312 5.9E-32 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CI104_RS27275 499fc8d841722d1ea14a66fbbe4ec061 326 Pfam PF05598 Transposase domain (DUF772) 51 124 3.6E-21 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS00300 16cdb3b8d7d13413f754e13e6731ed45 161 SUPERFAMILY SSF52728 3 161 2.88E-46 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS00300 16cdb3b8d7d13413f754e13e6731ed45 161 Gene3D G3DSA:3.40.35.10 3 159 9.0E-49 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS00300 16cdb3b8d7d13413f754e13e6731ed45 161 Pfam PF03830 PTS system sorbose subfamily IIB component 4 150 6.3E-45 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 PIRSF PIRSF000089 3 311 1.1E-79 T 28-03-2018 IPR001308 Electron transfer flavoprotein alpha subunit/FixB GO:0009055|GO:0050660 Reactome: R-HSA-611105 CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 SMART SM00893 7 180 6.4E-14 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 Gene3D G3DSA:3.40.50.620 2 179 2.5E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 Pfam PF01012 Electron transfer flavoprotein domain 19 167 2.2E-17 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 Gene3D G3DSA:3.40.50.1220 185 311 2.8E-45 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 ProSitePatterns PS00696 Electron transfer flavoprotein alpha-subunit signature. 254 280 - T 28-03-2018 IPR018206 Electron transfer flavoprotein subunit alpha, conserved site Reactome: R-HSA-611105 CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 SUPERFAMILY SSF52467 189 310 3.21E-41 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 Pfam PF00766 Electron transfer flavoprotein FAD-binding domain 189 271 1.2E-27 T 28-03-2018 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal Reactome: R-HSA-611105 CI104_RS12035 2c487df5185b351adf61393bfbadfae2 311 SUPERFAMILY SSF52402 6 181 3.42E-27 T 28-03-2018 CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 Pfam PF00571 CBS domain 141 189 6.6E-5 T 28-03-2018 IPR000644 CBS domain CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 Pfam PF00571 CBS domain 69 124 6.6E-8 T 28-03-2018 IPR000644 CBS domain CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 SUPERFAMILY SSF54631 66 202 2.93E-32 T 28-03-2018 CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 Gene3D G3DSA:3.10.580.10 50 199 5.4E-35 T 28-03-2018 CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 Gene3D G3DSA:3.30.465.10 200 281 6.9E-27 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 Pfam PF03471 Transporter associated domain 206 281 4.3E-23 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 SUPERFAMILY SSF56176 204 289 2.45E-24 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 SMART SM00116 78 127 4.2 T 28-03-2018 IPR000644 CBS domain CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 SMART SM00116 141 189 1.6 T 28-03-2018 IPR000644 CBS domain CI104_RS07610 880e2ad41e2a832398f1edf283e5ca19 292 SMART SM01091 205 283 1.2E-31 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 Gene3D G3DSA:2.40.10.10 165 271 8.8E-12 T 28-03-2018 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 Pfam PF13365 Trypsin-like peptidase domain 68 239 3.0E-6 T 28-03-2018 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 ProSitePatterns PS00134 Serine proteases, trypsin family, histidine active site. 79 84 - T 28-03-2018 IPR018114 Serine proteases, trypsin family, histidine active site GO:0004252|GO:0006508 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 ProSitePatterns PS00135 Serine proteases, trypsin family, serine active site. 216 227 - T 28-03-2018 IPR033116 Serine proteases, trypsin family, serine active site CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 Gene3D G3DSA:2.40.10.10 45 74 1.7E-6 T 28-03-2018 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 PRINTS PR00839 V8 serine protease family signature 211 227 1.5E-20 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 PRINTS PR00839 V8 serine protease family signature 231 243 1.5E-20 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 PRINTS PR00839 V8 serine protease family signature 177 190 1.5E-20 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 PRINTS PR00839 V8 serine protease family signature 68 85 1.5E-20 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 PRINTS PR00839 V8 serine protease family signature 43 60 1.5E-20 T 28-03-2018 IPR008256 Peptidase S1B GO:0006508|GO:0008236 CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 SUPERFAMILY SSF50494 32 264 6.42E-29 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS12650 534f5c621e982645bc4c4c0569d80598 273 Gene3D G3DSA:2.40.10.10 75 155 0.0011 T 28-03-2018 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00145 Argininosuccinate lyase family signature 137 159 2.2E-5 T 28-03-2018 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00145 Argininosuccinate lyase family signature 320 336 2.2E-5 T 28-03-2018 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00145 Argininosuccinate lyase family signature 178 198 2.2E-5 T 28-03-2018 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 Gene3D G3DSA:1.10.40.30 419 468 3.2E-17 T 28-03-2018 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 Gene3D G3DSA:1.10.275.10 3 141 1.6E-52 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 Pfam PF00206 Lyase 13 345 1.2E-112 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00149 Fumarate lyase superfamily signature 274 301 4.8E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00149 Fumarate lyase superfamily signature 320 336 4.8E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00149 Fumarate lyase superfamily signature 183 201 4.8E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 PRINTS PR00149 Fumarate lyase superfamily signature 138 156 4.8E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 Gene3D G3DSA:1.20.200.10 142 418 2.6E-73 T 28-03-2018 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 ProSitePatterns PS00163 Fumarate lyases signature. 320 329 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 Pfam PF10415 Fumarase C C-terminus 411 464 1.3E-16 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 TIGRFAM TIGR00839 aspA: aspartate ammonia-lyase 6 474 2.4E-273 T 28-03-2018 IPR004708 Aspartate ammonia-lyase GO:0006531|GO:0008797 KEGG: 00250+4.3.1.1 CI104_RS22705 856027d5fc978752b7e17df8824c2b29 478 SUPERFAMILY SSF48557 1 458 8.39E-146 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 Pfam PF02875 Mur ligase family, glutamate ligase domain 301 369 9.6E-8 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 Hamap MF_00639 UDP-N-acetylmuramoylalanine--D-glutamate ligase [murD]. 7 437 34.686 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 Pfam PF08245 Mur ligase middle domain 110 280 2.1E-27 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 SUPERFAMILY SSF53244 299 437 9.61E-51 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 Gene3D G3DSA:3.40.50.720 1 94 1.4E-14 T 28-03-2018 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 TIGRFAM TIGR01087 murD: UDP-N-acetylmuramoylalanine--D-glutamate ligase 8 435 1.7E-128 T 28-03-2018 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase GO:0005524|GO:0005737|GO:0008360|GO:0008764|GO:0051301 KEGG: 00471+6.3.2.9|KEGG: 00550+6.3.2.9|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 SUPERFAMILY SSF53623 95 297 4.97E-56 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 SUPERFAMILY SSF51984 3 94 1.01E-24 T 28-03-2018 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 Gene3D G3DSA:3.90.190.20 304 436 1.7E-33 T 28-03-2018 CI104_RS04890 e435400b64c47a2aeb4a256f82543c83 438 Gene3D G3DSA:3.40.1190.10 95 299 1.4E-59 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 Gene3D G3DSA:3.20.20.120 20 176 3.5E-18 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 TIGRFAM TIGR00612 ispG_gcpE: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 9 350 3.3E-125 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 SUPERFAMILY SSF56014 266 333 1.24E-9 T 28-03-2018 CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 Pfam PF04551 GcpE protein 14 353 2.8E-131 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 PIRSF PIRSF004640 1 363 8.4E-148 T 28-03-2018 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial GO:0005506|GO:0008299|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 Hamap MF_00159 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin) [ispG]. 7 357 34.586 T 28-03-2018 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type GO:0016114|GO:0046429|GO:0055114 KEGG: 00900+1.17.7.3 CI104_RS18545 3781019c18e5e06e06e58986eed65583 372 SUPERFAMILY SSF51717 15 208 2.51E-10 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS26590 447e990480740493ea1f28b5d9aadb23 121 Pfam PF02411 MerT mercuric transport protein 7 121 1.6E-63 T 28-03-2018 IPR003457 Mercuric transport protein MerT GO:0015097|GO:0015694|GO:0016020 CI104_RS26590 447e990480740493ea1f28b5d9aadb23 121 Gene3D G3DSA:1.10.287.910 21 73 1.9E-19 T 28-03-2018 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 76 90 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 204 223 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 149 163 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 32 48 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 167 186 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 293 319 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 92 105 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 123 139 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 48 69 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 248 267 8.0E-96 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 Pfam PF13416 Bacterial extracellular solute-binding protein 42 312 2.6E-39 T 28-03-2018 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 Gene3D G3DSA:3.40.190.10 146 300 1.5E-40 T 28-03-2018 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 PIRSF PIRSF019574 1 348 1.5E-133 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 SUPERFAMILY SSF53850 27 345 5.2E-97 T 28-03-2018 CI104_RS10940 39d11fd1ead2aa29dd37656769256d7a 348 Gene3D G3DSA:3.40.190.10 24 145 4.6E-17 T 28-03-2018 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 66 224 1.8E-60 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 SUPERFAMILY SSF55174 1 55 6.48E-12 T 28-03-2018 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 Gene3D G3DSA:3.10.290.10 1 62 3.7E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 Pfam PF01479 S4 domain 1 45 2.7E-8 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 Pfam PF00849 RNA pseudouridylate synthase 62 192 9.8E-19 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 SMART SM00363 1 60 7.5E-11 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 99 113 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 Gene3D G3DSA:3.30.2350.10 63 227 8.4E-39 T 28-03-2018 CI104_RS17055 f5b820629bd144028db6011de4d28bf1 231 SUPERFAMILY SSF55120 61 227 1.6E-47 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 Pfam PF00239 Resolvase, N terminal domain 3 159 2.6E-30 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 Gene3D G3DSA:3.40.50.1390 2 126 4.8E-33 T 28-03-2018 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 SUPERFAMILY SSF53041 1 159 1.24E-31 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 SMART SM00857 3 159 1.3E-41 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 Gene3D G3DSA:1.10.10.60 149 200 6.5E-6 T 28-03-2018 CI104_RS28600 debf8497dc6de50af7c3807b5d09fd2c 206 Gene3D G3DSA:1.20.5.40 127 148 3.3E-4 T 28-03-2018 CI104_RS02950 24dc9ae80575e3c3906475b692b92e23 174 SUPERFAMILY SSF55718 42 137 8.71E-22 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS02950 24dc9ae80575e3c3906475b692b92e23 174 Gene3D G3DSA:3.30.1050.10 22 140 1.4E-16 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS02950 24dc9ae80575e3c3906475b692b92e23 174 Pfam PF02036 SCP-2 sterol transfer family 44 133 5.5E-18 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS02950 24dc9ae80575e3c3906475b692b92e23 174 PIRSF PIRSF025550 1 173 7.7E-81 T 28-03-2018 IPR016830 Uncharacterised conserved protein UCP025550, lipid carrier protein, YhbT CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 ProSitePatterns PS00624 GMC oxidoreductases signature 2. 259 273 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 Pfam PF05199 GMC oxidoreductase 393 527 3.8E-41 T 28-03-2018 IPR007867 Glucose-methanol-choline oxidoreductase, C-terminal GO:0016614|GO:0055114 Reactome: R-HSA-6798163 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 SUPERFAMILY SSF51905 2 293 1.0E-85 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 SUPERFAMILY SSF51905 476 535 1.0E-85 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 Hamap MF_00750 Oxygen-dependent choline dehydrogenase [betA]. 1 554 60.75 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 ProSitePatterns PS00623 GMC oxidoreductases signature 1. 82 105 - T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 Pfam PF00732 GMC oxidoreductase 3 300 2.9E-101 T 28-03-2018 IPR000172 Glucose-methanol-choline oxidoreductase, N-terminal GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 TIGRFAM TIGR01810 betA: choline dehydrogenase 4 537 2.3E-296 T 28-03-2018 IPR011533 Oxygen-dependent choline dehydrogenase GO:0008812|GO:0019285 KEGG: 00260+1.2.1.8+1.1.99.1|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 PIRSF PIRSF000137 1 542 2.0E-137 T 28-03-2018 IPR012132 Glucose-methanol-choline oxidoreductase GO:0016614|GO:0050660|GO:0055114 Reactome: R-HSA-6798163 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 Gene3D G3DSA:4.10.450.10 37 102 4.7E-24 T 28-03-2018 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 Gene3D G3DSA:3.30.560.10 103 490 2.0E-98 T 28-03-2018 CI104_RS07185 56d71ba8d05713708a9e09e8d155531f 558 SUPERFAMILY SSF54373 295 477 9.81E-66 T 28-03-2018 CI104_RS18945 df2d6da501b02f7ca25997b975512b29 243 Pfam PF02578 Multi-copper polyphenol oxidoreductase laccase 20 241 7.9E-80 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CI104_RS18945 df2d6da501b02f7ca25997b975512b29 243 Gene3D G3DSA:3.60.140.10 1 243 4.0E-95 T 28-03-2018 CI104_RS18945 df2d6da501b02f7ca25997b975512b29 243 SUPERFAMILY SSF64438 4 242 6.78E-89 T 28-03-2018 IPR011324 Cytotoxic necrotizing factor-like, catalytic CI104_RS18945 df2d6da501b02f7ca25997b975512b29 243 TIGRFAM TIGR00726 TIGR00726: YfiH family protein 25 242 4.4E-78 T 28-03-2018 IPR003730 Multi-copper polyphenol oxidoreductase CI104_RS15550 e5af6a181b75ef2f52bd969374f63c49 295 ProSitePatterns PS01307 Flagellar motor protein motA family signature. 205 222 - T 28-03-2018 IPR000540 Flagellar motor protein MotA, conserved site CI104_RS15550 e5af6a181b75ef2f52bd969374f63c49 295 Pfam PF01618 MotA/TolQ/ExbB proton channel family 140 239 2.5E-11 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CI104_RS15550 e5af6a181b75ef2f52bd969374f63c49 295 TIGRFAM TIGR03818 MotA1: flagellar motor stator protein MotA 2 281 3.5E-117 T 28-03-2018 IPR022522 Flagellar motor stator, MotA CI104_RS11180 995965e95fcacdc1d6febaf02b490763 411 Pfam PF00589 Phage integrase family 213 376 4.4E-16 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS11180 995965e95fcacdc1d6febaf02b490763 411 Gene3D G3DSA:1.10.443.10 211 382 4.3E-23 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS11180 995965e95fcacdc1d6febaf02b490763 411 Pfam PF13356 Arm DNA-binding domain 8 93 2.2E-15 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CI104_RS11180 995965e95fcacdc1d6febaf02b490763 411 Gene3D G3DSA:1.10.150.130 105 186 6.4E-9 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS11180 995965e95fcacdc1d6febaf02b490763 411 SUPERFAMILY SSF56349 105 379 5.89E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS11180 995965e95fcacdc1d6febaf02b490763 411 Pfam PF14659 Phage integrase, N-terminal SAM-like domain 106 148 4.3E-5 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS05725 655e80047e7610d4975989a535c7ea77 246 SUPERFAMILY SSF141523 42 159 1.44E-9 T 28-03-2018 CI104_RS05725 655e80047e7610d4975989a535c7ea77 246 Gene3D G3DSA:2.40.440.10 39 174 3.2E-7 T 28-03-2018 CI104_RS05725 655e80047e7610d4975989a535c7ea77 246 Pfam PF03734 L,D-transpeptidase catalytic domain 78 159 1.1E-5 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CI104_RS08970 a4cb3da9205cafac5d98c7a09771e7e4 144 SUPERFAMILY SSF55804 9 143 1.2E-26 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS08970 a4cb3da9205cafac5d98c7a09771e7e4 144 Gene3D G3DSA:3.40.930.10 7 144 5.1E-26 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS08970 a4cb3da9205cafac5d98c7a09771e7e4 144 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 142 7.2E-25 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS03830 99412145d111fc52c31bd0dd50fd9a94 495 Pfam PF02321 Outer membrane efflux protein 29 211 8.2E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS03830 99412145d111fc52c31bd0dd50fd9a94 495 Pfam PF02321 Outer membrane efflux protein 234 429 4.6E-33 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS03830 99412145d111fc52c31bd0dd50fd9a94 495 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 23 443 6.1E-142 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CI104_RS03830 99412145d111fc52c31bd0dd50fd9a94 495 SUPERFAMILY SSF56954 27 446 3.27E-98 T 28-03-2018 CI104_RS03830 99412145d111fc52c31bd0dd50fd9a94 495 Gene3D G3DSA:1.20.1600.10 14 439 1.5E-76 T 28-03-2018 CI104_RS11465 942a5a037fba83aeb03aebc723a2adde 480 Pfam PF13751 Transposase DDE domain 344 463 6.9E-16 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS11465 942a5a037fba83aeb03aebc723a2adde 480 Pfam PF05598 Transposase domain (DUF772) 56 119 1.6E-16 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS07415 4868faa3c312200642aa656abe7122b1 268 ProSitePatterns PS00531 Ribonuclease T2 family histidine active site 2. 148 159 - T 28-03-2018 IPR033130 Ribonuclease T2, His active site 2 Reactome: R-HSA-6798695 CI104_RS07415 4868faa3c312200642aa656abe7122b1 268 Pfam PF00445 Ribonuclease T2 family 38 237 1.3E-11 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CI104_RS07415 4868faa3c312200642aa656abe7122b1 268 Gene3D G3DSA:3.90.730.10 30 267 1.4E-33 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CI104_RS07415 4868faa3c312200642aa656abe7122b1 268 SUPERFAMILY SSF55895 33 262 2.36E-26 T 28-03-2018 IPR001568 Ribonuclease T2-like GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CI104_RS07415 4868faa3c312200642aa656abe7122b1 268 ProSitePatterns PS00530 Ribonuclease T2 family histidine active site 1. 75 82 - T 28-03-2018 IPR018188 Ribonuclease T2, His active site 1 GO:0003723|GO:0033897 Reactome: R-HSA-6798695 CI104_RS09085 ee7e01170cf49d9cb604d9fbdde4363c 297 Pfam PF01636 Phosphotransferase enzyme family 64 240 3.3E-6 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CI104_RS09085 ee7e01170cf49d9cb604d9fbdde4363c 297 SUPERFAMILY SSF56112 4 270 1.05E-24 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS09085 ee7e01170cf49d9cb604d9fbdde4363c 297 Gene3D G3DSA:1.20.1050.20 87 192 7.7E-4 T 28-03-2018 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 SUPERFAMILY SSF109604 339 511 1.88E-16 T 28-03-2018 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 TIGRFAM TIGR00211 glyS: glycine--tRNA ligase, beta subunit 1 689 0.0 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 Gene3D G3DSA:1.10.730.10 574 683 2.6E-9 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 318 334 5.3E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 50 62 5.3E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 394 413 5.3E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 246 261 5.3E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 PRINTS PR01045 Glycyl-tRNA synthetase beta subunit signature 7 20 5.3E-37 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 Pfam PF05746 DALR anticodon binding domain 582 679 3.1E-7 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 Hamap MF_00255 Glycine--tRNA ligase beta subunit [glyS]. 3 688 27.026 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS00865 9f98a2e66aa48751b7eb6f3bc4e68956 689 Pfam PF02092 Glycyl-tRNA synthetase beta subunit 6 551 7.6E-215 T 28-03-2018 IPR015944 Glycine-tRNA ligase, beta subunit GO:0000166|GO:0004820|GO:0005524|GO:0005737|GO:0006426 KEGG: 00970+6.1.1.14 CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 Pfam PF00924 Mechanosensitive ion channel 120 323 7.2E-60 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 Gene3D G3DSA:3.30.70.100 230 329 2.0E-19 T 28-03-2018 CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 194 228 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 SUPERFAMILY SSF50182 162 228 3.6E-17 T 28-03-2018 IPR010920 LSM domain CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 Gene3D G3DSA:2.30.30.60 178 228 3.5E-13 T 28-03-2018 CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 SUPERFAMILY SSF82689 231 335 8.89E-21 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CI104_RS13840 b14ccd83e085b3bc31739af097bfc420 339 SUPERFAMILY SSF82861 79 160 4.32E-10 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CI104_RS11755 c8c47e46d53e7bdea2b5890be552ff1b 210 SUPERFAMILY SSF52540 1 196 1.04E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS11755 c8c47e46d53e7bdea2b5890be552ff1b 210 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS11755 c8c47e46d53e7bdea2b5890be552ff1b 210 Gene3D G3DSA:3.40.50.300 1 199 3.1E-42 T 28-03-2018 CI104_RS11755 c8c47e46d53e7bdea2b5890be552ff1b 210 SMART SM00382 26 210 1.0E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS11755 c8c47e46d53e7bdea2b5890be552ff1b 210 Pfam PF00005 ABC transporter 20 161 4.5E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 SUPERFAMILY SSF52096 30 181 1.74E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 SUPERFAMILY SSF52096 212 286 1.74E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 Pfam PF01343 Peptidase family S49 392 543 2.4E-53 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 Pfam PF01343 Peptidase family S49 141 295 1.5E-45 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 TIGRFAM TIGR00706 SppA_dom: signal peptide peptidase SppA, 36K type 334 541 5.0E-53 T 28-03-2018 IPR004635 Peptidase S49, SppA GO:0006508|GO:0008233 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 SUPERFAMILY SSF52096 468 530 1.22E-42 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 SUPERFAMILY SSF52096 320 440 1.22E-42 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 Gene3D G3DSA:3.90.226.10 321 612 5.7E-49 T 28-03-2018 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 Gene3D G3DSA:3.90.226.10 56 318 6.5E-26 T 28-03-2018 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 TIGRFAM TIGR00705 SppA_67K: signal peptide peptidase SppA, 67K type 16 609 1.8E-268 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CI104_RS11700 61d177703dc8d975c524507b0e87879a 618 PIRSF PIRSF001217 8 618 2.0E-226 T 28-03-2018 IPR004634 Peptidase S49, protease IV GO:0006465|GO:0008233|GO:0016021 CI104_RS04230 b597d3e06552eba5e5b0cc25ab25ae68 166 Hamap MF_00746 Protein SprT [sprT]. 12 165 40.49 T 28-03-2018 IPR023483 Uncharacterised protein family SprT CI104_RS04230 b597d3e06552eba5e5b0cc25ab25ae68 166 Pfam PF10263 SprT-like family 22 118 1.7E-16 T 28-03-2018 IPR006640 SprT-like CI104_RS04230 b597d3e06552eba5e5b0cc25ab25ae68 166 Pfam PF17283 SprT-like zinc ribbon domain 126 164 7.8E-11 T 28-03-2018 IPR035240 SprT-like, zinc ribbon domain CI104_RS04230 b597d3e06552eba5e5b0cc25ab25ae68 166 SMART SM00731 16 165 2.7E-61 T 28-03-2018 IPR006640 SprT-like CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 SUPERFAMILY SSF52467 167 363 2.29E-56 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 Gene3D G3DSA:3.40.50.970 10 195 2.7E-60 T 28-03-2018 CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 392 540 3.9E-48 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 16 563 7.2E-202 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 16 182 2.2E-57 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 429 448 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 SUPERFAMILY SSF52518 368 562 2.26E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 Gene3D G3DSA:3.40.50.1220 196 350 9.5E-50 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 203 336 2.6E-44 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 SUPERFAMILY SSF52518 12 190 4.21E-60 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS00165 fc3fed512bf902373f2eee6a03db25c4 564 Gene3D G3DSA:3.40.50.970 351 553 3.4E-51 T 28-03-2018 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 209 277 8.8E-9 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 TIGRFAM TIGR00054 TIGR00054: RIP metalloprotease RseP 3 450 5.5E-171 T 28-03-2018 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase GO:0004222|GO:0006508|GO:0016021 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 SUPERFAMILY SSF50156 195 290 3.68E-17 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 Gene3D G3DSA:2.30.42.10 126 220 7.5E-12 T 28-03-2018 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 Gene3D G3DSA:2.30.42.10 221 309 9.7E-19 T 28-03-2018 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 Pfam PF02163 Peptidase family M50 10 438 5.1E-88 T 28-03-2018 IPR008915 Peptidase M50 GO:0004222|GO:0006508 Reactome: R-HSA-1655829|Reactome: R-HSA-381033|Reactome: R-HSA-8874211|Reactome: R-HSA-8963889|Reactome: R-MMU-8963889 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 SUPERFAMILY SSF50156 86 187 9.6E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 SMART SM00228 115 186 0.021 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05330 f692ba83e07f5ec7304349d915981769 450 SMART SM00228 211 280 2.3E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS05855 0910886822320039c5a69ec41b300c28 517 SUPERFAMILY SSF103473 13 312 7.32E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS05855 0910886822320039c5a69ec41b300c28 517 Pfam PF00854 POT family 91 463 4.5E-63 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CI104_RS05855 0910886822320039c5a69ec41b300c28 517 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 155 167 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CI104_RS05855 0910886822320039c5a69ec41b300c28 517 Gene3D G3DSA:1.20.1250.20 10 215 9.4E-24 T 28-03-2018 CI104_RS05855 0910886822320039c5a69ec41b300c28 517 SUPERFAMILY SSF103473 321 499 3.92E-11 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS05855 0910886822320039c5a69ec41b300c28 517 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 79 103 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CI104_RS05855 0910886822320039c5a69ec41b300c28 517 Gene3D G3DSA:1.20.1250.20 286 516 8.8E-17 T 28-03-2018 CI104_RS05855 0910886822320039c5a69ec41b300c28 517 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 11 501 9.1E-109 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CI104_RS13125 ee2d6ad7a85d25c2859f35e0312003f0 92 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 92 4.1E-22 T 28-03-2018 IPR007711 Toxin HigB-1 CI104_RS13125 ee2d6ad7a85d25c2859f35e0312003f0 92 Gene3D G3DSA:3.30.2310.20 1 92 6.4E-27 T 28-03-2018 CI104_RS13125 ee2d6ad7a85d25c2859f35e0312003f0 92 SUPERFAMILY SSF143011 1 92 1.2E-15 T 28-03-2018 IPR035095 Toxin RelE-like domain CI104_RS10495 ab8c51f96c0eb27c856536424fccc070 82 Pfam PF10848 Protein of unknown function (DUF2655) 1 82 8.2E-44 T 28-03-2018 IPR020371 Uncharacterised protein family YceQ CI104_RS10495 ab8c51f96c0eb27c856536424fccc070 82 ProDom PD078424 YCEQ 1 82 8.0E-35 T 28-03-2018 IPR020371 Uncharacterised protein family YceQ CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 Gene3D G3DSA:3.40.50.720 455 629 1.2E-24 T 28-03-2018 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 SUPERFAMILY SSF55347 608 791 2.62E-47 T 28-03-2018 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 Gene3D G3DSA:3.30.360.10 630 787 1.3E-50 T 28-03-2018 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 ProSitePatterns PS00324 Aspartokinase signature. 14 22 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 SUPERFAMILY SSF51735 457 630 3.94E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 SUPERFAMILY SSF53633 12 299 2.23E-54 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 PIRSF PIRSF000727 12 810 1.7E-299 T 28-03-2018 IPR011147 Bifunctional aspartokinase/homoserine dehydrogenase I GO:0004072|GO:0004412|GO:0009067|GO:0055114 KEGG: 00260+2.7.2.4+1.1.1.3|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4+1.1.1.3|KEGG: 00300+2.7.2.4+1.1.1.3|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 ProSitePatterns PS01042 Homoserine dehydrogenase signature. 654 676 - T 28-03-2018 IPR019811 Homoserine dehydrogenase, conserved site GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 15 452 2.5E-63 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 Pfam PF00742 Homoserine dehydrogenase 608 803 4.3E-44 T 28-03-2018 IPR001342 Homoserine dehydrogenase, catalytic GO:0006520|GO:0055114 KEGG: 00260+1.1.1.3|KEGG: 00270+1.1.1.3|KEGG: 00300+1.1.1.3 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 Gene3D G3DSA:3.40.1160.10 9 319 2.7E-47 T 28-03-2018 CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 Pfam PF00696 Amino acid kinase family 12 284 3.7E-42 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS24055 92e378bbd75cc119939ce48bcba1a98a 810 Pfam PF03447 Homoserine dehydrogenase, NAD binding domain 465 600 1.1E-24 T 28-03-2018 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding GO:0016491|GO:0050661|GO:0055114 CI104_RS12395 600bd761587cae82ed2eaeceb624a928 215 Gene3D G3DSA:3.30.420.10 9 214 4.9E-30 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS12395 600bd761587cae82ed2eaeceb624a928 215 SUPERFAMILY SSF53098 13 207 4.5E-56 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS12395 600bd761587cae82ed2eaeceb624a928 215 Hamap MF_00157 Ribonuclease T [rnt]. 1 215 118.954 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CI104_RS12395 600bd761587cae82ed2eaeceb624a928 215 SMART SM00479 18 203 8.3E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS12395 600bd761587cae82ed2eaeceb624a928 215 TIGRFAM TIGR01298 RNaseT: ribonuclease T 10 208 7.2E-111 T 28-03-2018 IPR005987 Ribonuclease T GO:0004540|GO:0006396 CI104_RS12395 600bd761587cae82ed2eaeceb624a928 215 Pfam PF00929 Exonuclease 20 194 4.9E-39 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 Gene3D G3DSA:3.40.640.10 104 342 7.0E-33 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 SUPERFAMILY SSF53383 84 430 2.7E-61 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 SUPERFAMILY SSF46785 7 76 2.72E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 Pfam PF00392 Bacterial regulatory proteins, gntR family 7 69 7.8E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 SMART SM00345 10 69 2.4E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 Gene3D G3DSA:3.90.1150.10 343 430 7.5E-12 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 29 43 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 43 59 1.3E-5 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 Gene3D G3DSA:1.10.10.10 3 71 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18155 5267396339d8935ef8968282f5a7bd49 431 Pfam PF00155 Aminotransferase class I and II 109 425 3.7E-27 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS07205 9589485fc39377fb6679e21127532afe 677 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 55 503 9.5E-181 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CI104_RS07205 9589485fc39377fb6679e21127532afe 677 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 17 501 1.1E-175 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CI104_RS07205 9589485fc39377fb6679e21127532afe 677 ProSitePatterns PS01303 BCCT family of transporters signature. 318 327 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS06725 925851dd47cc4b21e72fd8939af9c105 408 Pfam PF12571 Phage tail-collar fibre protein 2 159 4.0E-41 T 28-03-2018 IPR022225 Phage tail fibre protein CI104_RS06725 925851dd47cc4b21e72fd8939af9c105 408 Pfam PF03406 Phage tail fibre repeat 301 337 1.7E-15 T 28-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CI104_RS06725 925851dd47cc4b21e72fd8939af9c105 408 Pfam PF03406 Phage tail fibre repeat 352 393 3.2E-17 T 28-03-2018 IPR005068 Bacteriophage lambda, Stf, side tail fibre-repeat-2 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 SUPERFAMILY SSF56645 54 292 1.97E-32 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 398 417 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 Gene3D G3DSA:2.40.110.10 179 275 1.6E-21 T 28-03-2018 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 181 275 2.6E-17 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 SUPERFAMILY SSF47203 283 442 2.42E-40 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 183 195 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 Gene3D G3DSA:1.20.140.10 276 449 1.6E-33 T 28-03-2018 CI104_RS22490 2a9eb93e72c04103d8f5f473c8cba990 540 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 285 439 3.1E-28 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS09510 b26180267460bbe497dd88ddc6e09074 288 SUPERFAMILY SSF52096 65 186 2.2E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS09510 b26180267460bbe497dd88ddc6e09074 288 SUPERFAMILY SSF52096 217 275 2.2E-30 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS09510 b26180267460bbe497dd88ddc6e09074 288 Gene3D G3DSA:3.90.226.10 51 287 2.3E-23 T 28-03-2018 CI104_RS09510 b26180267460bbe497dd88ddc6e09074 288 Pfam PF01343 Peptidase family S49 142 283 7.1E-27 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CI104_RS03845 44b67dccfb0d1f8866c3ba48a5154b04 275 Pfam PF00149 Calcineurin-like phosphoesterase 16 206 5.8E-22 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS03845 44b67dccfb0d1f8866c3ba48a5154b04 275 SUPERFAMILY SSF56300 15 258 7.31E-61 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS03845 44b67dccfb0d1f8866c3ba48a5154b04 275 ProDom PD587589 PHOSPHODIESTERASE ICC METALLOPHOSPHOESTERASE CYCLIC REGULATOR LACZ AMP HYDROLASE 3'5'-CYCLIC-NUCLEOTIDE EXPRESSION 206 261 1.0E-22 T 28-03-2018 IPR013622 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA, C-terminal KEGG: 00230+3.1.4.53 CI104_RS03845 44b67dccfb0d1f8866c3ba48a5154b04 275 Hamap MF_00905 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA [cpdA]. 15 261 40.893 T 28-03-2018 IPR026575 3,5-cyclic adenosine monophosphate phosphodiesterase CpdA GO:0004115 KEGG: 00230+3.1.4.53 CI104_RS03845 44b67dccfb0d1f8866c3ba48a5154b04 275 Gene3D G3DSA:3.60.21.10 8 272 3.9E-40 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 Pfam PF13377 Periplasmic binding protein-like domain 166 323 7.1E-36 T 28-03-2018 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 47 1.4E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 Gene3D G3DSA:3.40.50.2300 57 164 1.4E-19 T 28-03-2018 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 Gene3D G3DSA:3.40.50.2300 165 323 1.0E-46 T 28-03-2018 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 SUPERFAMILY SSF47413 2 58 3.38E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 SMART SM00354 1 70 3.8E-27 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 Gene3D G3DSA:1.10.260.40 1 56 7.6E-23 T 28-03-2018 CI104_RS07135 04239dee0ab7c1d3913404757464941a 323 SUPERFAMILY SSF53822 60 323 7.24E-63 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS10090 6b2d9c5c50d76cce53673a3caeffa621 250 TIGRFAM TIGR01938 nqrC: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit 6 239 1.8E-49 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CI104_RS10090 6b2d9c5c50d76cce53673a3caeffa621 250 Hamap MF_00427 Na(+)-translocating NADH-quinone reductase subunit C [nqrC]. 2 247 24.128 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CI104_RS10090 6b2d9c5c50d76cce53673a3caeffa621 250 SMART SM00900 134 232 6.9E-20 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CI104_RS10090 6b2d9c5c50d76cce53673a3caeffa621 250 PIRSF PIRSF009437 2 247 4.6E-57 T 28-03-2018 IPR010204 Na(+)-translocating NADH-quinone reductase subunit C GO:0006814|GO:0009276|GO:0010181|GO:0016021|GO:0016655|GO:0055114 CI104_RS10090 6b2d9c5c50d76cce53673a3caeffa621 250 Pfam PF04205 FMN-binding domain 138 229 5.7E-11 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CI104_RS27700 a8537c04288999b92e2936499d55f737 249 TIGRFAM TIGR02739 TraF: type-F conjugative transfer system pilin assembly protein TraF 6 248 8.3E-92 T 28-03-2018 IPR014110 Type-F conjugative transfer system pilin assembly protein TraF CI104_RS27700 a8537c04288999b92e2936499d55f737 249 Pfam PF13728 F plasmid transfer operon protein 25 238 1.6E-63 T 28-03-2018 CI104_RS16480 704e545546a1b414c45deb6c8f0d4d53 492 Pfam PF13440 Polysaccharide biosynthesis protein 31 325 1.6E-67 T 28-03-2018 CI104_RS07130 3b10b0363ce34e3ff1030dbb683d19b9 380 SUPERFAMILY SSF55347 128 326 4.74E-32 T 28-03-2018 CI104_RS07130 3b10b0363ce34e3ff1030dbb683d19b9 380 Gene3D G3DSA:3.40.50.720 1 142 4.2E-41 T 28-03-2018 CI104_RS07130 3b10b0363ce34e3ff1030dbb683d19b9 380 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 269 3.0E-6 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS07130 3b10b0363ce34e3ff1030dbb683d19b9 380 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 119 5.7E-29 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS07130 3b10b0363ce34e3ff1030dbb683d19b9 380 SUPERFAMILY SSF51735 2 153 5.12E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS07130 3b10b0363ce34e3ff1030dbb683d19b9 380 Gene3D G3DSA:3.30.360.10 143 380 2.4E-43 T 28-03-2018 CI104_RS14315 aae7a3b70ed1ded4579985466813f9ea 337 SMART SM00448 8 120 7.2E-31 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS14315 aae7a3b70ed1ded4579985466813f9ea 337 Pfam PF00072 Response regulator receiver domain 10 119 7.9E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS14315 aae7a3b70ed1ded4579985466813f9ea 337 Gene3D G3DSA:3.40.50.2300 6 296 4.4E-34 T 28-03-2018 CI104_RS14315 aae7a3b70ed1ded4579985466813f9ea 337 SUPERFAMILY SSF52172 8 139 1.31E-32 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS14315 aae7a3b70ed1ded4579985466813f9ea 337 Hamap MF_00958 Regulator of RpoS [rssB]. 1 337 55.026 T 28-03-2018 IPR028616 Regulator of RpoS CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Pfam PF01743 Poly A polymerase head domain 3 122 6.9E-18 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Gene3D G3DSA:3.30.460.10 1 118 1.2E-29 T 28-03-2018 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Hamap MF_01262 CCA-adding enzyme [cca]. 1 401 46.482 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 150 212 1.4E-15 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Gene3D G3DSA:1.10.3090.10 119 408 1.8E-59 T 28-03-2018 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 SUPERFAMILY SSF81891 120 402 1.7E-55 T 28-03-2018 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Hamap MF_01261 Multifunctional CCA protein [cca]. 1 407 54.132 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 SUPERFAMILY SSF81301 2 119 4.36E-31 T 28-03-2018 CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 Pfam PF01966 HD domain 229 328 7.4E-12 T 28-03-2018 IPR006674 HD domain CI104_RS03755 53207e70f6b89f36b047a559c5197f7f 413 PIRSF PIRSF000813 1 408 1.9E-205 T 28-03-2018 IPR012006 tRNA nucleotidyltransferase, proteobacteria GO:0001680|GO:0003723|GO:0004810|GO:0005524 CI104_RS02300 1469ce60c1bc41982651a2e258ad6d97 393 SUPERFAMILY SSF161098 181 375 3.4E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS02300 1469ce60c1bc41982651a2e258ad6d97 393 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 103 388 3.3E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS02300 1469ce60c1bc41982651a2e258ad6d97 393 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 84 147 1.2E-16 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS02300 1469ce60c1bc41982651a2e258ad6d97 393 Gene3D G3DSA:1.10.3720.10 11 175 1.3E-20 T 28-03-2018 CI104_RS02300 1469ce60c1bc41982651a2e258ad6d97 393 Gene3D G3DSA:1.10.3720.10 177 393 2.3E-37 T 28-03-2018 CI104_RS02300 1469ce60c1bc41982651a2e258ad6d97 393 SUPERFAMILY SSF161098 83 161 1.44E-13 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 Gene3D G3DSA:3.50.50.60 129 242 1.7E-22 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 8 30 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 144 168 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 129 141 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 62 72 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 277 295 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 239 260 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 107 115 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 41 56 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00469 Pyridine nucleotide disulphide reductase class-II signature 199 215 4.1E-77 T 28-03-2018 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 Gene3D G3DSA:3.50.50.60 249 321 1.1E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 Gene3D G3DSA:3.50.50.60 2 128 1.4E-19 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 TIGRFAM TIGR01292 TRX_reduct: thioredoxin-disulfide reductase 8 314 6.3E-125 T 28-03-2018 IPR005982 Thioredoxin reductase GO:0004791|GO:0005737|GO:0019430|GO:0055114 KEGG: 00450+1.8.1.9 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 8 301 1.2E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 ProSitePatterns PS00573 Pyridine nucleotide-disulphide oxidoreductases class-II active site. 136 156 - T 28-03-2018 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site GO:0016491|GO:0055114 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 148 166 5.6E-41 T 28-03-2018 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 106 124 5.6E-41 T 28-03-2018 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 9 28 5.6E-41 T 28-03-2018 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 267 289 5.6E-41 T 28-03-2018 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 237 253 5.6E-41 T 28-03-2018 CI104_RS08905 6193ec32ae9504f1d7f1d5c48f18027c 322 SUPERFAMILY SSF51905 2 315 3.19E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 Pfam PF00072 Response regulator receiver domain 5 117 7.4E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 SMART SM00862 150 225 5.7E-27 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 Gene3D G3DSA:1.10.10.10 126 228 3.3E-36 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 SMART SM00448 3 116 4.0E-45 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 Gene3D G3DSA:3.40.50.2300 2 125 1.8E-36 T 28-03-2018 CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 TIGRFAM TIGR02154 PhoB: phosphate regulon transcriptional regulatory protein PhoB 1 226 4.6E-116 T 28-03-2018 IPR011879 Signal transduction response regulator, phosphate regulon transcriptional regulatory protein PhoB GO:0000156|GO:0000160|GO:0003677|GO:0006817 CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 SUPERFAMILY SSF52172 3 184 5.89E-43 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS06130 44514b548be387336e8b3fa7e2ba738d 229 Pfam PF00486 Transcriptional regulatory protein, C terminal 151 225 2.1E-28 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 253 439 1.5E-26 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 Hamap MF_01535 Rhamnulokinase [rhaB]. 6 483 53.305 T 28-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 TIGRFAM TIGR02627 rhamnulo_kin: rhamnulokinase 7 460 1.0E-233 T 28-03-2018 IPR013449 Rhamnulokinase GO:0008993|GO:0019301 KEGG: 00040+2.7.1.5|KEGG: 00051+2.7.1.5 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 SUPERFAMILY SSF53067 6 245 4.6E-47 T 28-03-2018 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 Gene3D G3DSA:3.30.420.40 1 235 1.0E-45 T 28-03-2018 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 7 243 3.9E-30 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 SUPERFAMILY SSF53067 250 472 3.15E-31 T 28-03-2018 CI104_RS24270 b99bf6dc85aabc648d9453406f063303 489 Gene3D G3DSA:3.30.420.40 236 485 4.4E-41 T 28-03-2018 CI104_RS05235 aa326b9f0ceb7962d7571f86b2b0fd56 207 Pfam PF03458 UPF0126 domain 4 78 2.1E-23 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CI104_RS05235 aa326b9f0ceb7962d7571f86b2b0fd56 207 Pfam PF03458 UPF0126 domain 92 163 1.8E-18 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CI104_RS25235 1c60a189e580d732b4949b8621c34c80 445 PIRSF PIRSF005353 5 444 1.9E-176 T 28-03-2018 IPR026033 Purine permease PbuG-like CI104_RS25235 1c60a189e580d732b4949b8621c34c80 445 Pfam PF00860 Permease family 31 404 6.2E-43 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 SMART SM00448 5 116 1.1E-43 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Pfam PF00072 Response regulator receiver domain 7 114 2.2E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 358 367 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 169 182 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Gene3D G3DSA:1.10.8.60 318 376 3.0E-26 T 28-03-2018 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 SMART SM00382 165 308 2.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Pfam PF00158 Sigma-54 interaction domain 146 311 9.5E-74 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Gene3D G3DSA:3.40.50.300 135 316 3.4E-28 T 28-03-2018 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 SUPERFAMILY SSF52172 4 190 1.42E-52 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 420 437 1.3E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 437 457 1.3E-12 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 SUPERFAMILY SSF46689 358 457 9.86E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 SUPERFAMILY SSF52540 148 387 2.04E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Gene3D G3DSA:1.10.10.60 377 457 2.7E-19 T 28-03-2018 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Gene3D G3DSA:3.40.50.2300 2 134 8.4E-45 T 28-03-2018 CI104_RS17250 3891b5efe4b7e7bd575ee877f85c3c58 461 Pfam PF02954 Bacterial regulatory protein, Fis family 418 454 2.4E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 Gene3D G3DSA:3.30.420.40 1 237 2.3E-78 T 28-03-2018 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 347 367 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 TIGRFAM TIGR01312 XylB: xylulokinase 3 477 9.5E-190 T 28-03-2018 IPR006000 Xylulokinase GO:0004856|GO:0005997 KEGG: 00040+2.7.1.17 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 PIRSF PIRSF000538 1 484 4.2E-136 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 SUPERFAMILY SSF53067 242 482 1.14E-64 T 28-03-2018 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 SUPERFAMILY SSF53067 2 242 3.32E-73 T 28-03-2018 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 ProSitePatterns PS00933 FGGY family of carbohydrate kinases signature 1. 126 138 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 1 240 1.8E-84 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 249 436 8.3E-32 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS00840 c76d4f0a5d350649ae26000cdf81578b 484 Gene3D G3DSA:3.30.420.40 238 481 1.1E-59 T 28-03-2018 CI104_RS13630 4726fc6f06bfecfefe46c70baf5dfd38 458 Gene3D G3DSA:1.20.1600.10 20 458 1.9E-92 T 28-03-2018 CI104_RS13630 4726fc6f06bfecfefe46c70baf5dfd38 458 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 455 1.2E-110 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CI104_RS13630 4726fc6f06bfecfefe46c70baf5dfd38 458 SUPERFAMILY SSF56954 2 457 6.15E-102 T 28-03-2018 CI104_RS13630 4726fc6f06bfecfefe46c70baf5dfd38 458 Pfam PF02321 Outer membrane efflux protein 59 246 2.5E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS13630 4726fc6f06bfecfefe46c70baf5dfd38 458 Pfam PF02321 Outer membrane efflux protein 268 453 4.7E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 Gene3D G3DSA:2.40.50.140 4 69 1.0E-29 T 28-03-2018 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 PRINTS PR00050 Cold shock protein signature 6 21 1.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 PRINTS PR00050 Cold shock protein signature 27 36 1.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 PRINTS PR00050 Cold shock protein signature 42 60 1.8E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 PIRSF PIRSF002599 1 69 6.6E-27 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 7.2E-34 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 SUPERFAMILY SSF50249 3 68 5.14E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 28-03-2018 IPR019844 Cold-shock conserved site CI104_RS07475 2f60b1ca88ad672eb983217787edf563 69 SMART SM00357 5 69 9.9E-34 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 SUPERFAMILY SSF53383 109 566 7.77E-118 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 SUPERFAMILY SSF52172 1 107 1.24E-35 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 PIRSF PIRSF009393 1 719 2.7E-288 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Gene3D G3DSA:3.90.100.10 601 728 1.8E-38 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 576 704 2.5E-48 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 103 4.4E-25 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 TIGRFAM TIGR04301 ODC_inducible: ornithine decarboxylase SpeF 1 718 0.0 T 28-03-2018 IPR027568 Ornithine decarboxylase SpeF GO:0004586 KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 SUPERFAMILY SSF55904 571 718 1.44E-46 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Gene3D G3DSA:3.40.640.10 109 419 1.7E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 109 551 4.2E-197 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Gene3D G3DSA:3.90.1150.10 421 600 4.4E-51 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 Gene3D G3DSA:3.40.50.220 3 107 4.6E-37 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CI104_RS07780 483ad3ab2e23f5748bb96b7c1fe283de 732 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 350 364 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 Hamap MF_00114 Deoxyribose-phosphate aldolase [deoC]. 13 234 25.227 T 28-03-2018 IPR028581 Deoxyribose-phosphate aldolase type I GO:0004139 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 Gene3D G3DSA:3.20.20.70 1 225 6.7E-70 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 15 222 9.8E-51 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 Pfam PF01791 DeoC/LacD family aldolase 19 218 1.4E-13 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 SUPERFAMILY SSF51569 10 223 7.33E-60 T 28-03-2018 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 PIRSF PIRSF001357 8 230 1.9E-55 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS14555 ffc9c569325fd9d7237df8b7b3af43ec 236 SMART SM01133 14 233 7.5E-55 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 6 17 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 Gene3D G3DSA:3.30.420.40 5 198 2.6E-66 T 28-03-2018 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PRINTS PR00471 Acetate kinase family signature 6 17 7.1E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PRINTS PR00471 Acetate kinase family signature 325 341 7.1E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PRINTS PR00471 Acetate kinase family signature 302 315 7.1E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PRINTS PR00471 Acetate kinase family signature 176 189 7.1E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PRINTS PR00471 Acetate kinase family signature 206 227 7.1E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PRINTS PR00471 Acetate kinase family signature 380 392 7.1E-48 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 PIRSF PIRSF000722 2 400 1.5E-142 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 TIGRFAM TIGR00016 ackA: acetate kinase 1 399 1.3E-186 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 SUPERFAMILY SSF53067 160 398 6.66E-84 T 28-03-2018 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 Pfam PF00871 Acetokinase family 6 393 1.2E-177 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 Hamap MF_00020 Acetate kinase [ackA]. 1 400 185.377 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 SUPERFAMILY SSF53067 4 199 4.14E-62 T 28-03-2018 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 206 223 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS17590 a427c718bc5a4182c6c77d48420c92d4 400 Gene3D G3DSA:3.30.420.40 199 400 8.0E-77 T 28-03-2018 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 SUPERFAMILY SSF47336 210 280 1.57E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS07340 e9111f0a39d349a7517327b787912634 285 SUPERFAMILY SSF52499 1 210 9.42E-64 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 Pfam PF00550 Phosphopantetheine attachment site 216 276 1.5E-7 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PIRSF PIRSF001111 1 285 8.0E-130 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 Gene3D G3DSA:1.10.1200.10 210 285 7.9E-9 T 28-03-2018 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 Gene3D G3DSA:3.40.50.850 1 209 3.0E-47 T 28-03-2018 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 Pfam PF00857 Isochorismatase family 32 204 9.2E-36 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PRINTS PR01398 Isochorismatase signature 63 80 1.8E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PRINTS PR01398 Isochorismatase signature 112 134 1.8E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PRINTS PR01398 Isochorismatase signature 186 203 1.8E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PRINTS PR01398 Isochorismatase signature 2 14 1.8E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PRINTS PR01398 Isochorismatase signature 168 186 1.8E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS07340 e9111f0a39d349a7517327b787912634 285 PRINTS PR01398 Isochorismatase signature 80 99 1.8E-50 T 28-03-2018 IPR016291 Isochorismatase GO:0008908 MetaCyc: PWY-5901 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 Gene3D G3DSA:3.30.420.40 145 288 2.5E-18 T 28-03-2018 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 TIGRFAM TIGR03723 T6A_TsaD_YgjD: tRNA threonylcarbamoyl adenosine modification protein TsaD 3 313 3.6E-136 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 TIGRFAM TIGR00329 gcp_kae1: metallohydrolase, glycoprotease/Kae1 family 4 306 3.2E-129 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 263 272 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 76 96 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 4 17 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 97 116 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 131 143 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 PRINTS PR00789 O-sialoglycoprotein endopeptidase (M22) metallo-protease family signature 154 175 5.5E-53 T 28-03-2018 IPR017861 Kae1/TsaD family KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 Gene3D G3DSA:3.30.420.40 1 144 2.7E-42 T 28-03-2018 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 Pfam PF00814 Glycoprotease family 24 307 4.7E-102 T 28-03-2018 IPR000905 Gcp-like domain KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 ProSitePatterns PS01016 Glycoprotease family signature. 96 116 - T 28-03-2018 IPR017860 Peptidase M22, conserved site KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618|Reactome: R-HSA-6782315 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 SUPERFAMILY SSF53067 1 309 6.74E-44 T 28-03-2018 CI104_RS03680 63b6823a9c12f3a6893d2efcac296950 337 Hamap MF_01445 tRNA N6-adenosine threonylcarbamoyltransferase [tsaD]. 1 331 64.102 T 28-03-2018 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD GO:0002949|GO:0004222 KEGG: 00564+2.3.1.23|MetaCyc: PWY-5353|MetaCyc: PWY-5368|MetaCyc: PWY-5995|MetaCyc: PWY-6433|MetaCyc: PWY-6803|MetaCyc: PWY-6958|MetaCyc: PWY-7053|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7470|MetaCyc: PWY-7618 CI104_RS06275 726e62e250bbd136faca4fd18d794103 156 SUPERFAMILY SSF52121 4 154 7.85E-59 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS06275 726e62e250bbd136faca4fd18d794103 156 TIGRFAM TIGR00114 lumazine-synth: 6,7-dimethyl-8-ribityllumazine synthase 14 150 3.3E-60 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS06275 726e62e250bbd136faca4fd18d794103 156 Gene3D G3DSA:3.40.50.960 1 155 1.2E-64 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS06275 726e62e250bbd136faca4fd18d794103 156 Hamap MF_00178 6,7-dimethyl-8-ribityllumazine synthase [ribH]. 8 154 31.65 T 28-03-2018 IPR034964 Lumazine synthase GO:0000906|GO:0009231 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS06275 726e62e250bbd136faca4fd18d794103 156 Pfam PF00885 6,7-dimethyl-8-ribityllumazine synthase 13 151 1.4E-55 T 28-03-2018 IPR002180 Lumazine/riboflavin synthase GO:0009231|GO:0009349 KEGG: 00740+2.5.1.78|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS16925 ef2cacdbbde94c6a0f6070c8ce153886 349 TIGRFAM TIGR00698 TIGR00698: conserved hypothetical protein 14 348 1.1E-159 T 28-03-2018 IPR004630 Uncharacterised protein family UPF0324, bacteria GO:0016021 CI104_RS16925 ef2cacdbbde94c6a0f6070c8ce153886 349 Pfam PF03601 Conserved hypothetical protein 698 18 326 6.2E-113 T 28-03-2018 IPR018383 Uncharacterised protein family UPF0324, prokaryote GO:0016021 CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 Pfam PF01381 Helix-turn-helix 15 64 2.3E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 Pfam PF07883 Cupin domain 112 170 5.4E-7 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 Gene3D G3DSA:1.10.260.40 3 70 3.9E-16 T 28-03-2018 CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 SUPERFAMILY SSF51182 59 178 1.83E-18 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 SMART SM00530 11 66 2.6E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 SUPERFAMILY SSF47413 5 70 5.63E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS24320 d62aad3da4a961db5a9e75d168bb616a 181 Gene3D G3DSA:2.60.120.10 71 181 3.6E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 SMART SM00866 88 232 1.1E-16 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 1.5E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 1.5E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 SMART SM00345 9 68 6.6E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 SUPERFAMILY SSF46785 3 72 1.67E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 Pfam PF00392 Bacterial regulatory proteins, gntR family 5 68 3.9E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 SUPERFAMILY SSF64288 56 238 1.32E-29 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 Gene3D G3DSA:1.10.10.10 1 74 2.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 Gene3D G3DSA:3.40.1410.10 75 242 1.1E-27 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS08395 a46c082c2e9f8b393e03c22ee09cf53f 244 Pfam PF07702 UTRA domain 99 231 6.6E-15 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 Pfam PF01055 Glycosyl hydrolases family 31 240 667 3.3E-121 T 28-03-2018 IPR000322 Glycoside hydrolase family 31 GO:0004553|GO:0005975 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 Gene3D G3DSA:2.60.40.1760 1 238 5.0E-56 T 28-03-2018 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 Gene3D G3DSA:3.20.20.80 239 605 1.0E-111 T 28-03-2018 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 SUPERFAMILY SSF74650 1 247 6.91E-67 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 Gene3D G3DSA:2.60.40.1180 606 665 2.5E-21 T 28-03-2018 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 SUPERFAMILY SSF117125 666 771 2.62E-33 T 28-03-2018 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 SUPERFAMILY SSF51011 586 665 1.65E-21 T 28-03-2018 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 Pfam PF13802 Galactose mutarotase-like 159 218 8.6E-16 T 28-03-2018 IPR025887 Glycoside hydrolase family 31, N-terminal domain CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 Gene3D G3DSA:2.60.40.1180 666 771 3.2E-31 T 28-03-2018 CI104_RS00405 5d257ee6588feb5158917fc5c5c14e48 772 SUPERFAMILY SSF51445 263 603 6.83E-90 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 Gene3D G3DSA:1.20.58.340 140 255 2.9E-17 T 28-03-2018 CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 Gene3D G3DSA:1.20.58.340 256 327 3.4E-15 T 28-03-2018 CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 SUPERFAMILY SSF144083 265 324 1.02E-12 T 28-03-2018 CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 Gene3D G3DSA:3.30.460.20 1 139 2.9E-20 T 28-03-2018 CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 Hamap MF_01565 Zinc transport protein ZntB [zntB]. 1 327 72.086 T 28-03-2018 IPR023714 Zinc transport protein ZntB GO:0005385|GO:0005886|GO:0071577 CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 SUPERFAMILY SSF143865 8 255 3.53E-49 T 28-03-2018 CI104_RS13760 b17bbe0399f1b455ade15aac26bfd97c 327 Pfam PF01544 CorA-like Mg2+ transporter protein 39 323 8.7E-64 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CI104_RS14800 19eed94e5af3ba05cd7e18aaef71b346 492 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 206 366 8.2E-22 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CI104_RS14800 19eed94e5af3ba05cd7e18aaef71b346 492 Pfam PF17482 Phage tail sheath C-terminal domain 375 491 2.7E-13 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CI104_RS14800 19eed94e5af3ba05cd7e18aaef71b346 492 PIRSF PIRSF007349 1 492 2.3E-149 T 28-03-2018 IPR007067 Tail sheath protein CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 SUPERFAMILY SSF103088 59 171 2.88E-34 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 TIGRFAM TIGR02802 Pal_lipo: peptidoglycan-associated lipoprotein 70 172 2.1E-46 T 28-03-2018 IPR014169 Peptidoglycan-associated lipoprotein GO:0009279 CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 ProSitePatterns PS01068 OmpA-like domain. 104 148 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 Gene3D G3DSA:3.30.1330.60 43 172 3.5E-34 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 PRINTS PR01021 OMPA domain signature 117 133 8.3E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 PRINTS PR01021 OMPA domain signature 102 117 8.3E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 PRINTS PR01021 OMPA domain signature 72 94 8.3E-17 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS08080 a76fe20fd4ad4bb7b07df2057732e2ac 172 Pfam PF00691 OmpA family 71 166 1.3E-21 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS27560 2267befbb712b51d54cbb339304953d5 411 Gene3D G3DSA:1.20.120.330 4 410 4.7E-9 T 28-03-2018 CI104_RS27560 2267befbb712b51d54cbb339304953d5 411 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 6.5E-14 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain CI104_RS27560 2267befbb712b51d54cbb339304953d5 411 Pfam PF03050 Transposase IS66 family 176 410 3.2E-77 T 28-03-2018 IPR004291 Transposase, IS66 CI104_RS27560 2267befbb712b51d54cbb339304953d5 411 Pfam PF13005 zinc-finger binding domain of transposase IS66 119 161 2.9E-12 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 59 75 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 186 200 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 294 312 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 313 329 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 244 268 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 217 243 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 PRINTS PR01050 Pyruvate kinase family signature 269 293 8.5E-77 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 TIGRFAM TIGR01064 pyruv_kin: pyruvate kinase 2 469 3.0E-190 T 28-03-2018 IPR001697 Pyruvate kinase GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 Pfam PF02887 Pyruvate kinase, alpha/beta domain 356 468 1.1E-28 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 SUPERFAMILY SSF52935 323 469 6.28E-36 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 SUPERFAMILY SSF51621 1 74 5.23E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 SUPERFAMILY SSF51621 156 339 5.23E-100 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 Pfam PF00224 Pyruvate kinase, barrel domain 1 341 1.1E-151 T 28-03-2018 IPR015793 Pyruvate kinase, barrel GO:0000287|GO:0004743|GO:0006096|GO:0030955 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 SUPERFAMILY SSF50800 70 166 1.92E-29 T 28-03-2018 IPR011037 Pyruvate kinase-like, insert domain CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 Gene3D G3DSA:3.40.1380.20 322 470 7.3E-46 T 28-03-2018 IPR015795 Pyruvate kinase, C-terminal KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 Gene3D G3DSA:3.20.20.60 1 77 2.4E-18 T 28-03-2018 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 ProSitePatterns PS00110 Pyruvate kinase active site signature. 215 227 - T 28-03-2018 IPR018209 Pyruvate kinase, active site GO:0004743|GO:0006096 KEGG: 00010+2.7.1.40|KEGG: 00230+2.7.1.40|KEGG: 00620+2.7.1.40|MetaCyc: PWY-1042|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7218|MetaCyc: PWY-7383|Reactome: R-HSA-70171 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 Gene3D G3DSA:3.20.20.60 167 321 2.5E-63 T 28-03-2018 CI104_RS12170 ff98d18bece352e24236ef38cb5a9892 470 Gene3D G3DSA:2.40.33.10 78 166 2.0E-31 T 28-03-2018 CI104_RS10930 b6dce1a79dff0813cb315df4a0b52d5a 303 SUPERFAMILY SSF53067 1 300 2.42E-60 T 28-03-2018 CI104_RS10930 b6dce1a79dff0813cb315df4a0b52d5a 303 Pfam PF00480 ROK family 2 300 1.6E-68 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS10930 b6dce1a79dff0813cb315df4a0b52d5a 303 Gene3D G3DSA:3.30.420.40 1 112 2.0E-25 T 28-03-2018 CI104_RS10930 b6dce1a79dff0813cb315df4a0b52d5a 303 Hamap MF_01271 N-acetyl-D-glucosamine kinase [nagK]. 1 303 65.8 T 28-03-2018 IPR023505 N-acetyl-D-glucosamine kinase GO:0045127 KEGG: 00520+2.7.1.59|MetaCyc: PWY-6517|MetaCyc: PWY-6906 CI104_RS10930 b6dce1a79dff0813cb315df4a0b52d5a 303 ProSitePatterns PS01125 ROK family signature. 130 157 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS10930 b6dce1a79dff0813cb315df4a0b52d5a 303 Gene3D G3DSA:3.30.420.40 113 303 9.6E-49 T 28-03-2018 CI104_RS18260 01fe188286f925ee6315de4391171707 395 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 278 298 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS18260 01fe188286f925ee6315de4391171707 395 SUPERFAMILY SSF56796 22 393 1.03E-113 T 28-03-2018 CI104_RS18260 01fe188286f925ee6315de4391171707 395 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 191 219 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS18260 01fe188286f925ee6315de4391171707 395 Pfam PF00465 Iron-containing alcohol dehydrogenase 27 387 1.7E-112 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS18260 01fe188286f925ee6315de4391171707 395 Gene3D G3DSA:3.40.50.1970 27 201 1.4E-42 T 28-03-2018 CI104_RS18260 01fe188286f925ee6315de4391171707 395 Gene3D G3DSA:1.20.1090.10 203 395 3.6E-57 T 28-03-2018 CI104_RS03885 89e918845f44a174c84ea257ad674d49 104 Gene3D G3DSA:3.30.70.100 1 103 4.0E-21 T 28-03-2018 CI104_RS03885 89e918845f44a174c84ea257ad674d49 104 SUPERFAMILY SSF54909 1 98 1.8E-30 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS03885 89e918845f44a174c84ea257ad674d49 104 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 87 9.1E-28 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CI104_RS19420 7908e6462ae664dfbb8846314ebc8681 415 Gene3D G3DSA:1.20.1250.20 221 414 5.6E-23 T 28-03-2018 CI104_RS19420 7908e6462ae664dfbb8846314ebc8681 415 Gene3D G3DSA:1.20.1250.20 19 211 4.1E-32 T 28-03-2018 CI104_RS19420 7908e6462ae664dfbb8846314ebc8681 415 SUPERFAMILY SSF103473 15 401 3.92E-61 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS19420 7908e6462ae664dfbb8846314ebc8681 415 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS19420 7908e6462ae664dfbb8846314ebc8681 415 Pfam PF07690 Major Facilitator Superfamily 29 253 3.1E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 61 75 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 SUPERFAMILY SSF51735 161 333 3.24E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 SUPERFAMILY SSF50129 318 369 8.48E-12 T 28-03-2018 IPR011032 GroES-like CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 SUPERFAMILY SSF50129 1 186 3.5E-70 T 28-03-2018 IPR011032 GroES-like CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 Pfam PF00107 Zinc-binding dehydrogenase 197 330 9.8E-24 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 Gene3D G3DSA:3.90.180.10 311 369 1.6E-5 T 28-03-2018 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 Gene3D G3DSA:3.90.180.10 1 189 2.7E-59 T 28-03-2018 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 TIGRFAM TIGR02818 adh_III_F_hyde: S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase 2 369 1.1E-221 T 28-03-2018 IPR014183 Alcohol dehydrogenase class III GO:0006069|GO:0008270|GO:0051903|GO:0055114 KEGG: 00010+1.1.1.1|KEGG: 00071+1.1.1.1|KEGG: 00260+1.1.1.1|KEGG: 00350+1.1.1.1|KEGG: 00592+1.1.1.1|KEGG: 00620+1.1.1.28|KEGG: 00625+1.1.1.1|KEGG: 00626+1.1.1.1|KEGG: 00680+1.1.1.284|KEGG: 00830+1.1.1.1|KEGG: 00980+1.1.1.1|KEGG: 00982+1.1.1.1|MetaCyc: PWY-1801|MetaCyc: PWY-3162|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5079|MetaCyc: PWY-5082|MetaCyc: PWY-5480|MetaCyc: PWY-5486|MetaCyc: PWY-5751|MetaCyc: PWY-6313|MetaCyc: PWY-6333|MetaCyc: PWY-6342|MetaCyc: PWY-6454|MetaCyc: PWY-6587|MetaCyc: PWY-6802|MetaCyc: PWY-6871|MetaCyc: PWY-6901|MetaCyc: PWY-7013|MetaCyc: PWY-7111|MetaCyc: PWY-7118|MetaCyc: PWY-7396|MetaCyc: PWY-7798|Reactome: R-HSA-71384 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 28 154 6.1E-26 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 Gene3D G3DSA:3.40.50.720 190 310 4.1E-25 T 28-03-2018 CI104_RS26390 f8c7d1536d33c3e716090fecd299357f 369 SMART SM00829 12 367 5.4E-5 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS17940 7980721a3998486668012c0bf93cd626 306 Hamap MF_01942 Lipid A biosynthesis lauroyltransferase [lpxL]. 4 305 49.506 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CI104_RS17940 7980721a3998486668012c0bf93cd626 306 TIGRFAM TIGR02207 lipid_A_htrB: lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase 5 305 1.8E-139 T 28-03-2018 IPR011920 Lipid A biosynthesis lauroyl (or palmitoleoyl) acyltransferase GO:0009245|GO:0016021|GO:0016740 KEGG: 00600+2.3.1.24 CI104_RS17940 7980721a3998486668012c0bf93cd626 306 Hamap MF_01943 Lipid A biosynthesis palmitoleoyltransferase [lpxP]. 3 305 69.889 T 28-03-2018 IPR030857 Lipid A biosynthesis palmitoleoyltransferase, LpxP GO:0008951|GO:0009409|GO:0036104 KEGG: 00600+2.3.1.24 CI104_RS17940 7980721a3998486668012c0bf93cd626 306 PIRSF PIRSF026649 3 305 3.4E-91 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CI104_RS17940 7980721a3998486668012c0bf93cd626 306 Pfam PF03279 Bacterial lipid A biosynthesis acyltransferase 5 296 3.4E-112 T 28-03-2018 IPR004960 Bacterial lipid A biosynthesis acyltransferase GO:0016021|GO:0016740 CI104_RS06910 cf57a2f1a0895e534a2ce2afd57f3d2e 152 Pfam PF01957 NfeD-like C-terminal, partner-binding 13 148 2.7E-23 T 28-03-2018 IPR002810 NfeD-like, C-terminal domain CI104_RS06910 cf57a2f1a0895e534a2ce2afd57f3d2e 152 Gene3D G3DSA:2.40.50.140 85 152 3.0E-13 T 28-03-2018 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 PIRSF PIRSF000709 170 238 0.021 T 28-03-2018 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 PIRSF PIRSF000709 3 116 2.0E-8 T 28-03-2018 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 SMART SM00855 5 191 2.0E-26 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 Pfam PF00300 Histidine phosphatase superfamily (branch 1) 6 125 1.5E-29 T 28-03-2018 IPR013078 Histidine phosphatase superfamily, clade-1 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 SUPERFAMILY SSF53254 4 247 8.14E-77 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 Hamap MF_01039 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [gpmA]. 3 230 46.757 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 Gene3D G3DSA:3.40.50.1240 2 250 3.5E-66 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 ProSitePatterns PS00175 Phosphoglycerate mutase family phosphohistidine signature. 8 17 - T 28-03-2018 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site GO:0003824|GO:0008152 CI104_RS08160 52415517e2363e17db4a057968e4cbc4 250 TIGRFAM TIGR01258 pgm_1: phosphoglycerate mutase 1 family 5 248 7.4E-129 T 28-03-2018 IPR005952 Phosphoglycerate mutase 1 GO:0004619|GO:0006096|GO:0016868 KEGG: 00010+5.4.2.11|KEGG: 00260+5.4.2.11|KEGG: 00680+5.4.2.11|MetaCyc: PWY-1622|MetaCyc: PWY-5484 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 PIRSF PIRSF001461 1 225 7.3E-106 T 28-03-2018 IPR026019 Ribulose-phosphate 3-epimerase GO:0004750|GO:0006098 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 ProSitePatterns PS01085 Ribulose-phosphate 3-epimerase family signature 1. 33 47 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 Pfam PF00834 Ribulose-phosphate 3 epimerase family 6 203 1.3E-90 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 Gene3D G3DSA:3.20.20.70 1 220 4.2E-86 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 SUPERFAMILY SSF51366 3 218 2.53E-75 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 TIGRFAM TIGR01163 rpe: ribulose-phosphate 3-epimerase 5 216 2.8E-96 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS01810 275a799e05939a4d635954a507cc3830 225 ProSitePatterns PS01086 Ribulose-phosphate 3-epimerase family signature 2. 136 158 - T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 Pfam PF01545 Cation efflux family 16 209 2.3E-39 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 Pfam PF16916 Dimerisation domain of Zinc Transporter 213 290 4.2E-21 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 SUPERFAMILY SSF160240 212 291 1.7E-19 T 28-03-2018 CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 Gene3D G3DSA:1.20.1510.10 11 208 2.1E-41 T 28-03-2018 CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 SUPERFAMILY SSF161111 12 210 5.23E-54 T 28-03-2018 CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 Gene3D G3DSA:3.30.70.1350 209 299 3.1E-22 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CI104_RS25895 cb239dcb20b082820b04aaf135a17dda 307 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 14 292 2.4E-70 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS21795 eb6de3d5d6d7aed0839e22a5747fac65 68 Gene3D G3DSA:1.10.10.10 18 67 1.6E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21795 eb6de3d5d6d7aed0839e22a5747fac65 68 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 12 59 1.4E-8 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Pfam PF01624 MutS domain I 11 122 1.6E-42 T 28-03-2018 IPR007695 DNA mismatch repair protein MutS-like, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 SUPERFAMILY SSF53150 117 269 1.7E-43 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 SMART SM00534 607 794 6.2E-124 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 SMART SM00533 286 591 2.3E-107 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Pfam PF00488 MutS domain V 610 797 1.4E-88 T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Gene3D G3DSA:3.40.50.300 567 815 4.5E-42 T 28-03-2018 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Pfam PF05190 MutS family domain IV 428 516 1.2E-28 T 28-03-2018 IPR007861 DNA mismatch repair protein MutS, clamp GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Gene3D G3DSA:3.40.1170.10 2 134 1.2E-47 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 SUPERFAMILY SSF55271 5 116 4.71E-43 T 28-03-2018 IPR016151 DNA mismatch repair protein MutS, N-terminal GO:0005524|GO:0006298|GO:0030983 Reactome: R-HSA-5632928 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Hamap MF_00096 DNA mismatch repair protein MutS [mutS]. 10 845 25.407 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Gene3D G3DSA:3.30.420.110 135 265 2.6E-27 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 ProSitePatterns PS00486 DNA mismatch repair proteins mutS family signature. 688 704 - T 28-03-2018 IPR000432 DNA mismatch repair protein MutS, C-terminal GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 SUPERFAMILY SSF48334 270 566 1.05E-89 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Pfam PF05192 MutS domain III 272 559 3.7E-39 T 28-03-2018 IPR007696 DNA mismatch repair protein MutS, core GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 PIRSF PIRSF037677 211 831 1.0E-126 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 PIRSF PIRSF037677 4 190 4.7E-27 T 28-03-2018 IPR017261 DNA mismatch repair protein MutS/MSH GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Gene3D G3DSA:1.10.1420.10 266 407 1.1E-35 T 28-03-2018 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Gene3D G3DSA:1.10.1420.10 408 535 1.7E-30 T 28-03-2018 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 SUPERFAMILY SSF52540 567 798 1.21E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 Pfam PF05188 MutS domain II 131 256 9.0E-34 T 28-03-2018 IPR007860 DNA mismatch repair protein MutS, connector domain GO:0005524|GO:0006298|GO:0030983 CI104_RS19895 4a481b843e0bacc74b7f991b43cb34ab 853 TIGRFAM TIGR01070 mutS1: DNA mismatch repair protein MutS 10 850 0.0 T 28-03-2018 IPR005748 DNA mismatch repair protein MutS GO:0005524|GO:0006298|GO:0030983 CI104_RS06060 429d7ebd36203320101dd2257b53d2bc 86 Hamap MF_01198 Anti-adapter protein IraP [iraP]. 1 86 28.315 T 28-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CI104_RS06060 429d7ebd36203320101dd2257b53d2bc 86 Pfam PF10796 Sigma-S stabilisation anti-adaptor protein 1 85 1.2E-30 T 28-03-2018 IPR019732 Sigma-S stabilisation anti-adaptor protein GO:0005737 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 266 278 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 287 302 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 118 131 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 302 313 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 PRINTS PR00046 Major sigma-70 factor signature 142 150 2.5E-27 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 225 323 1.46E-23 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04545 Sigma-70, region 4 262 315 2.7E-15 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88946 56 164 2.75E-45 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 SUPERFAMILY SSF88659 167 241 8.72E-15 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04539 Sigma-70 region 3 174 248 1.2E-20 T 28-03-2018 IPR007624 RNA polymerase sigma-70 region 3 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF00140 Sigma-70 factor, region 1.2 56 88 2.9E-11 T 28-03-2018 IPR009042 RNA polymerase sigma-70 region 1.2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.601.10 2 163 6.4E-59 T 28-03-2018 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02394 rpoS_proteo: RNA polymerase sigma factor RpoS 48 328 4.4E-145 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 287 313 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Hamap MF_00959 RNA polymerase sigma factor RpoS [rpoS]. 3 328 40.0 T 28-03-2018 IPR012761 RNA polymerase sigma factor RpoS GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 164 214 1.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Pfam PF04542 Sigma-70 region 2 94 163 3.6E-21 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 118 131 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 Gene3D G3DSA:1.10.10.10 256 324 4.1E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19920 58216af11ca71371bf7a8801dbe9637f 330 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 90 317 5.5E-35 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 SUPERFAMILY SSF47831 146 254 3.14E-18 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 363 653 5.2E-110 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 SUPERFAMILY SSF55594 5 88 2.75E-15 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 559 577 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Gene3D G3DSA:3.40.930.10 684 831 1.4E-31 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Pfam PF05524 PEP-utilising enzyme, N-terminal 125 237 8.9E-11 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Pfam PF00381 PTS HPr component phosphorylation site 6 84 7.8E-11 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Gene3D G3DSA:3.50.30.10 256 389 7.8E-20 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Pfam PF00391 PEP-utilising enzyme, mobile domain 264 337 3.6E-14 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Gene3D G3DSA:3.20.20.60 427 655 2.7E-66 T 28-03-2018 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 14 21 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 559 574 7.2E-20 T 28-03-2018 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 612 624 7.2E-20 T 28-03-2018 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 405 424 7.2E-20 T 28-03-2018 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 576 591 7.2E-20 T 28-03-2018 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 689 829 1.2E-30 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Gene3D G3DSA:1.10.274.10 145 255 1.1E-18 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 SUPERFAMILY SSF55804 689 828 1.01E-29 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 SUPERFAMILY SSF52009 236 355 2.22E-23 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Gene3D G3DSA:3.30.1340.10 3 85 9.6E-13 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 296 307 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 Gene3D G3DSA:3.20.20.60 390 426 5.6E-8 T 28-03-2018 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 SUPERFAMILY SSF51621 366 661 4.19E-95 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS24015 fdbd77e8864722feed6b236e91614210 833 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 181 677 6.1E-140 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CI104_RS26150 d5f5c905e99fdc49e1fd1110dac4afad 223 Pfam PF00089 Trypsin 37 206 3.5E-7 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CI104_RS26150 d5f5c905e99fdc49e1fd1110dac4afad 223 SUPERFAMILY SSF50494 32 219 1.73E-19 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS26150 d5f5c905e99fdc49e1fd1110dac4afad 223 Gene3D G3DSA:2.40.10.10 20 114 4.8E-12 T 28-03-2018 CI104_RS20105 f528b535942d4bb0230dcbefb034fdb5 181 Hamap MF_01104 Protein Syd [syd]. 3 181 34.649 T 28-03-2018 IPR009948 Syd GO:0009898 CI104_RS20105 f528b535942d4bb0230dcbefb034fdb5 181 Pfam PF07348 Syd protein (SUKH-2) 8 179 6.1E-69 T 28-03-2018 IPR009948 Syd GO:0009898 CI104_RS16460 b06ae8e92ba83cd3ee039758ca7873a8 297 Gene3D G3DSA:3.90.550.10 1 297 8.7E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16460 b06ae8e92ba83cd3ee039758ca7873a8 297 SUPERFAMILY SSF53448 2 284 5.41E-58 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16460 b06ae8e92ba83cd3ee039758ca7873a8 297 TIGRFAM TIGR01105 galF: regulatory protein GalF 1 297 1.2E-204 T 28-03-2018 IPR005774 UTP-glucose pyrophosphorylase, regulatory subunit GO:0006011|GO:0030234 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CI104_RS16460 b06ae8e92ba83cd3ee039758ca7873a8 297 Pfam PF00483 Nucleotidyl transferase 5 273 6.0E-22 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 Pfam PF00005 ABC transporter 24 172 5.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 Pfam PF02687 FtsX-like permease family 549 636 1.0E-9 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 Pfam PF12704 MacB-like periplasmic core domain 269 485 1.0E-28 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 SMART SM00382 33 220 2.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 SUPERFAMILY SSF52540 4 225 2.99E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22850 56b93352578726a5f9345f0d271aaa70 643 Gene3D G3DSA:3.40.50.300 1 241 7.4E-65 T 28-03-2018 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 Pfam PF00854 POT family 89 447 7.2E-91 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 SUPERFAMILY SSF103473 15 212 4.45E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 SUPERFAMILY SSF103473 257 491 4.45E-31 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 Gene3D G3DSA:1.20.1250.20 269 497 6.1E-16 T 28-03-2018 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 Gene3D G3DSA:1.20.1250.20 8 210 5.4E-25 T 28-03-2018 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 ProSitePatterns PS01022 PTR2 family proton/oligopeptide symporters signature 1. 77 101 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 152 164 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 Hamap MF_01878 Dipeptide and tripeptide permease A [dtpA]. 1 489 49.24 T 28-03-2018 IPR023517 Amino acid/peptide transporter family, dipeptide and tripeptide permease A GO:0006857|GO:0015197|GO:0016020 CI104_RS12485 ede37f3319115df899f0a3c9d0d13621 501 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 17 485 1.9E-140 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 SUPERFAMILY SSF46894 129 185 2.07E-13 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 ProSitePatterns PS00622 LuxR-type HTH domain signature. 151 178 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 SMART SM00421 134 191 4.8E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 Pfam PF00196 Bacterial regulatory proteins, luxR family 136 184 7.1E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 137 151 1.3E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 151 167 1.3E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 167 179 1.3E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 Gene3D G3DSA:1.10.10.10 47 191 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22645 0ab429b0636e84973c7ed0efa1fe0c8b 196 Gene3D G3DSA:3.40.50.2300 1 46 0.13 T 28-03-2018 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 TIGRFAM TIGR03377 glycerol3P_GlpA: glycerol-3-phosphate dehydrogenase, anaerobic, A subunit 10 539 7.3E-265 T 28-03-2018 IPR017752 Glycerol-3-phosphate dehydrogenase, GlpA subunit GO:0004368|GO:0005886|GO:0010181|GO:0046174|GO:0050660|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 SUPERFAMILY SSF51905 9 322 2.33E-45 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 14 31 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 Pfam PF04324 BFD-like [2Fe-2S] binding domain 432 484 6.5E-10 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 311 317 3.1E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 9 21 3.1E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 38 50 3.1E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 3.1E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 22 32 3.1E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 82 94 3.1E-23 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 Gene3D G3DSA:3.50.50.60 2 393 4.9E-57 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17340 82f37c8337b79b7c7176a7ee160eefd0 542 Pfam PF01266 FAD dependent oxidoreductase 10 359 1.3E-52 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 99 110 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 Gene3D G3DSA:3.30.70.20 22 70 8.3E-7 T 28-03-2018 CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 Gene3D G3DSA:3.30.70.20 106 171 1.8E-7 T 28-03-2018 CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 SUPERFAMILY SSF54862 33 153 2.97E-29 T 28-03-2018 CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 TIGRFAM TIGR01971 NuoI: NADH-quinone oxidoreductase, chain I 16 137 2.5E-51 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 Pfam PF12838 4Fe-4S dicluster domain 59 113 1.3E-11 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 Hamap MF_01351 NAD(P)H-quinone oxidoreductase subunit I, chloroplastic [ndhI]. 1 163 27.027 T 28-03-2018 IPR010226 NADH-quinone oxidoreductase, chain I GO:0016020|GO:0016651|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17515 8890a645cf3489765f245d9620c4c598 180 Gene3D G3DSA:3.30.70.20 71 105 9.7E-15 T 28-03-2018 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 Gene3D G3DSA:1.10.357.10 8 196 3.0E-28 T 28-03-2018 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 59 1.7E-14 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 SUPERFAMILY SSF48498 87 192 4.0E-16 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 Hamap MF_00768 HTH-type transcriptional regulator BetI [betI]. 1 196 101.353 T 28-03-2018 IPR017757 Transcriptional repressor BetI CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 SUPERFAMILY SSF46689 6 82 7.7E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 87 192 1.9E-28 T 28-03-2018 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 1.6E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.6E-6 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 TIGRFAM TIGR03384 betaine_BetI: transcriptional repressor BetI 2 192 7.0E-76 T 28-03-2018 IPR017757 Transcriptional repressor BetI CI104_RS07195 84e63faae82ab01165a1845be5a0d035 196 ProSitePatterns PS01081 TetR-type HTH domain signature. 26 57 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 28-03-2018 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 28-03-2018 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28625 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 28-03-2018 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 28-03-2018 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS27485 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 28-03-2018 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 28-03-2018 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26520 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 Gene3D G3DSA:3.40.710.10 27 286 1.6E-35 T 28-03-2018 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 Pfam PF13354 Beta-lactamase enzyme family 49 256 7.7E-40 T 28-03-2018 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 SUPERFAMILY SSF56601 29 285 2.91E-79 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 62 79 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 219 234 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 140 164 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 166 191 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 30 54 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 104 129 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 PRINTS PR00118 Beta-lactamase class A signature 202 217 1.4E-78 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS26785 a57302ca27229fb06a22728ba4bd7aca 286 ProSitePatterns PS00146 Beta-lactamase class-A active site. 64 79 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS14020 d1a457eb508cb95cfdd7f831e2253037 267 SUPERFAMILY SSF52540 5 251 1.04E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14020 d1a457eb508cb95cfdd7f831e2253037 267 Gene3D G3DSA:3.40.50.300 2 256 1.8E-65 T 28-03-2018 CI104_RS14020 d1a457eb508cb95cfdd7f831e2253037 267 SMART SM00382 39 228 9.2E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS14020 d1a457eb508cb95cfdd7f831e2253037 267 ProSitePatterns PS00211 ABC transporters family signature. 151 165 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS14020 d1a457eb508cb95cfdd7f831e2253037 267 Pfam PF00005 ABC transporter 31 178 3.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS09255 05361cf92902f12f9ce93cafcd5ba435 169 Hamap MF_01179 Cell division inhibitor SulA [sulA]. 1 169 41.929 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CI104_RS09255 05361cf92902f12f9ce93cafcd5ba435 169 Gene3D G3DSA:3.40.50.300 31 148 3.0E-17 T 28-03-2018 CI104_RS09255 05361cf92902f12f9ce93cafcd5ba435 169 TIGRFAM TIGR00623 sula: cell division inhibitor SulA 2 169 1.7E-96 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CI104_RS09255 05361cf92902f12f9ce93cafcd5ba435 169 SUPERFAMILY SSF52540 31 147 9.56E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09255 05361cf92902f12f9ce93cafcd5ba435 169 PIRSF PIRSF003093 1 169 2.8E-86 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CI104_RS09255 05361cf92902f12f9ce93cafcd5ba435 169 Pfam PF03846 Cell division inhibitor SulA 7 119 5.6E-54 T 28-03-2018 IPR004596 Cell division suppressor protein, SulA GO:0009432|GO:0051782 CI104_RS23130 ffb3551f9c3ddc143dad9c68ff00993f 252 Gene3D G3DSA:3.60.15.10 1 252 2.5E-46 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS23130 ffb3551f9c3ddc143dad9c68ff00993f 252 Pfam PF12706 Beta-lactamase superfamily domain 73 223 1.2E-13 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS23130 ffb3551f9c3ddc143dad9c68ff00993f 252 SUPERFAMILY SSF56281 5 251 1.9E-31 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS23130 ffb3551f9c3ddc143dad9c68ff00993f 252 TIGRFAM TIGR03307 PhnP: phosphonate metabolism protein PhnP 3 248 3.1E-120 T 28-03-2018 IPR017693 Phosphonate metabolism protein PhnP GO:0008081|GO:0019700 KEGG: 00440+3.1.4.55|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Gene3D G3DSA:2.40.50.140 49 116 6.0E-32 T 28-03-2018 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 SUPERFAMILY SSF68912 1 46 2.0E-12 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 SMART SM00382 170 355 5.0E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 SUPERFAMILY SSF50249 48 125 9.0E-30 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Pfam PF07498 Rho termination factor, N-terminal domain 5 47 4.3E-17 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 TIGRFAM TIGR00767 rho: transcription termination factor Rho 2 417 1.0E-222 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 SMART SM00357 52 118 9.6E-19 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Gene3D G3DSA:1.10.720.10 1 43 1.9E-13 T 28-03-2018 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Pfam PF07497 Rho termination factor, RNA-binding domain 52 125 2.7E-32 T 28-03-2018 IPR011113 Rho termination factor, RNA-binding domain GO:0003723|GO:0006353 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Hamap MF_01884 Transcription termination factor Rho [rho]. 1 419 252.259 T 28-03-2018 IPR004665 Transcription termination factor Rho GO:0003723|GO:0005524|GO:0006353|GO:0008186 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 160 363 8.1E-23 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 SMART SM00959 5 47 6.9E-18 T 28-03-2018 IPR011112 Rho termination factor, N-terminal GO:0006353 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 Gene3D G3DSA:3.40.50.300 129 419 5.9E-58 T 28-03-2018 CI104_RS24930 ad1a8af67b9c891d8755099b984fd1ea 419 SUPERFAMILY SSF52540 90 371 1.22E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19720 ad95014f6261d21f39c947267333ab70 331 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 238 330 6.3E-43 T 28-03-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS19720 ad95014f6261d21f39c947267333ab70 331 TIGRFAM TIGR00825 EIIBC-GUT: PTS system, glucitol/sorbitol-specific, IIBC component 3 331 7.5E-192 T 28-03-2018 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS19720 ad95014f6261d21f39c947267333ab70 331 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 183 1.2E-73 T 28-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS19720 ad95014f6261d21f39c947267333ab70 331 Gene3D G3DSA:1.10.110.10 68 166 6.4E-4 T 28-03-2018 CI104_RS14210 2df856ead962d05c0ee80d26a083b0c5 247 Pfam PF06790 Uncharacterised protein family (UPF0259) 1 244 2.2E-97 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 CI104_RS14210 2df856ead962d05c0ee80d26a083b0c5 247 Hamap MF_01067 UPF0259 membrane protein YciC [yciC]. 1 246 22.0 T 28-03-2018 IPR009627 Uncharacterised protein family UPF0259 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 SUPERFAMILY SSF48310 212 698 1.83E-73 T 28-03-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 SMART SM00790 5 206 5.6E-89 T 28-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 Pfam PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 228 685 2.0E-65 T 28-03-2018 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal GO:0009055|GO:0016491|GO:0016625|GO:0051536|GO:0055114 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 SUPERFAMILY SSF56228 3 210 2.62E-62 T 28-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 Pfam PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain 7 205 2.6E-68 T 28-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 Gene3D G3DSA:1.10.599.10 465 688 8.2E-40 T 28-03-2018 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 GO:0016625|GO:0051536|GO:0055114 KEGG: 00030+1.2.7.5 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 Gene3D G3DSA:1.10.569.10 270 464 6.9E-26 T 28-03-2018 IPR013984 Aldehyde ferredoxin oxidoreductase, domain 2 CI104_RS12240 b4aa14bb4e40d145833056d21daaf56b 700 Gene3D G3DSA:3.60.9.10 2 210 2.3E-73 T 28-03-2018 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal GO:0016491|GO:0016625|GO:0051536|GO:0055114 CI104_RS18705 403d77618392c9b8874dbf5b46d122a1 397 Gene3D G3DSA:1.10.10.10 5 68 2.2E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18705 403d77618392c9b8874dbf5b46d122a1 397 Pfam PF00480 ROK family 116 352 1.1E-31 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS18705 403d77618392c9b8874dbf5b46d122a1 397 SUPERFAMILY SSF46785 11 65 1.44E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18705 403d77618392c9b8874dbf5b46d122a1 397 SUPERFAMILY SSF53067 85 351 4.68E-36 T 28-03-2018 CI104_RS18705 403d77618392c9b8874dbf5b46d122a1 397 Gene3D G3DSA:3.30.420.40 69 202 9.7E-15 T 28-03-2018 CI104_RS18705 403d77618392c9b8874dbf5b46d122a1 397 Gene3D G3DSA:3.30.420.40 203 397 1.0E-33 T 28-03-2018 CI104_RS25655 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25655 736c010e8c5c56df94bcdcc42ba1c38c 254 Gene3D G3DSA:3.30.420.10 62 209 2.6E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25655 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 28-03-2018 IPR032874 DDE domain CI104_RS26720 736c010e8c5c56df94bcdcc42ba1c38c 254 SUPERFAMILY SSF53098 72 192 1.29E-5 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26720 736c010e8c5c56df94bcdcc42ba1c38c 254 Gene3D G3DSA:3.30.420.10 62 209 2.6E-12 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26720 736c010e8c5c56df94bcdcc42ba1c38c 254 Pfam PF13610 DDE domain 73 211 3.9E-50 T 28-03-2018 IPR032874 DDE domain CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 Gene3D G3DSA:3.40.50.450 1 212 2.1E-82 T 28-03-2018 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 7 26 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 213 225 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 32 45 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 159 175 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 240 262 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 94 110 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 121 138 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 139 157 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PRINTS PR00476 ATP-dependent phosphofructokinase family signature 177 194 7.9E-82 T 28-03-2018 IPR022953 ATP-dependent 6-phosphofructokinase GO:0003872|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 SUPERFAMILY SSF53784 3 306 6.67E-113 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 Pfam PF00365 Phosphofructokinase 4 276 1.8E-106 T 28-03-2018 IPR000023 Phosphofructokinase domain GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 TIGRFAM TIGR02482 PFKA_ATP: 6-phosphofructokinase 4 301 1.5E-125 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 ProSitePatterns PS00433 Phosphofructokinase signature. 244 262 - T 28-03-2018 IPR015912 Phosphofructokinase, conserved site GO:0003872|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385|Reactome: R-HSA-70171 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 Hamap MF_00339 ATP-dependent 6-phosphofructokinase [pfkA]. 2 320 46.845 T 28-03-2018 IPR012828 ATP-dependent 6-phosphofructokinase, prokaryotic GO:0003872|GO:0005524|GO:0006002|GO:0006096 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 Gene3D G3DSA:3.40.50.450 213 307 1.9E-8 T 28-03-2018 CI104_RS24210 8898efdb4a4331154fd31b3ee3ce2a77 320 PIRSF PIRSF000532 1 320 9.0E-131 T 28-03-2018 IPR012003 ATP-dependent 6-phosphofructokinase, prokaryotic-type GO:0005524|GO:0006002|GO:0006096|GO:0008443 KEGG: 00010+2.7.1.11|KEGG: 00030+2.7.1.11|KEGG: 00051+2.7.1.11|KEGG: 00052+2.7.1.11|KEGG: 00680+2.7.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-7385 CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 SUPERFAMILY SSF46785 8 118 2.13E-48 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 Pfam PF03882 MukF winged-helix domain 3 117 8.3E-58 T 28-03-2018 IPR033439 Chromosome partition protein MukF, winged-helix domain CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 PIRSF PIRSF018282 1 440 1.8E-244 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 Gene3D G3DSA:1.10.10.10 24 116 2.4E-40 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 SUPERFAMILY SSF140570 119 281 1.7E-77 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 Pfam PF17192 MukF middle domain 121 281 1.5E-84 T 28-03-2018 IPR033440 Chromosome partition protein MukF, middle domain CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 Hamap MF_01803 Chromosome partition protein MukF [mukF]. 1 440 57.675 T 28-03-2018 IPR005582 Chromosome partition protein MukF GO:0005509|GO:0006260|GO:0007059 CI104_RS09105 3ac844f5cff10980eb0d6feb474a3f33 440 Pfam PF17193 MukF C-terminal domain 283 440 2.8E-80 T 28-03-2018 IPR033441 Chromosome partition protein MukF, C-terminal domain CI104_RS21005 14314f9dad470e669e5c377dc2427618 577 Gene3D G3DSA:3.90.1640.10 52 245 1.2E-22 T 28-03-2018 CI104_RS21005 14314f9dad470e669e5c377dc2427618 577 SUPERFAMILY SSF64182 48 465 1.31E-117 T 28-03-2018 CI104_RS21005 14314f9dad470e669e5c377dc2427618 577 Pfam PF02272 DHHA1 domain 322 452 4.1E-26 T 28-03-2018 IPR003156 DHHA1 domain GO:0003676 KEGG: 00970+6.1.1.7|Reactome: R-HSA-379716 CI104_RS21005 14314f9dad470e669e5c377dc2427618 577 Pfam PF01368 DHH family 74 201 1.5E-8 T 28-03-2018 IPR001667 DDH domain KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS21005 14314f9dad470e669e5c377dc2427618 577 TIGRFAM TIGR00644 recJ: single-stranded-DNA-specific exonuclease RecJ 23 573 1.2E-168 T 28-03-2018 IPR004610 Bacterial RecJ exonuclease GO:0006281|GO:0006310|GO:0008409 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 SUPERFAMILY SSF53850 33 330 4.2E-54 T 28-03-2018 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 Gene3D G3DSA:3.40.190.10 38 157 9.4E-19 T 28-03-2018 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 Gene3D G3DSA:3.40.190.10 158 328 1.9E-28 T 28-03-2018 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 Pfam PF13416 Bacterial extracellular solute-binding protein 56 327 5.4E-25 T 28-03-2018 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 136 152 1.3E-7 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 276 295 1.3E-7 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS13410 ab9ec74cdb239e1a6ad33ad45c53e287 381 PRINTS PR00909 Bacterial periplasmic spermidine/putrescine-binding protein signature 62 83 1.3E-7 T 28-03-2018 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein GO:0015846|GO:0019808|GO:0042597 CI104_RS08525 a91af4dc8007e0bb0b5119a08f25af2b 420 Gene3D G3DSA:2.60.120.330 1 420 1.4E-131 T 28-03-2018 IPR027443 Isopenicillin N synthase-like CI104_RS08525 a91af4dc8007e0bb0b5119a08f25af2b 420 SUPERFAMILY SSF51197 4 419 5.49E-154 T 28-03-2018 CI104_RS08525 a91af4dc8007e0bb0b5119a08f25af2b 420 Pfam PF07350 Protein of unknown function (DUF1479) 16 419 3.3E-144 T 28-03-2018 IPR010856 Protein of unknown function DUF1479 CI104_RS13655 0cac7ca8369045bcf9cb5fe56027367f 107 PIRSF PIRSF025560 1 107 1.7E-39 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CI104_RS13655 0cac7ca8369045bcf9cb5fe56027367f 107 Pfam PF07027 Protein of unknown function (DUF1318) 19 107 1.1E-28 T 28-03-2018 IPR008309 Uncharacterised conserved protein UCP025560 CI104_RS06070 d944a0d6aeea9bb45997d27b5a51b1c3 106 Pfam PF07769 psiF repeat 71 103 6.1E-17 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CI104_RS06070 d944a0d6aeea9bb45997d27b5a51b1c3 106 Pfam PF07769 psiF repeat 27 59 1.0E-18 T 28-03-2018 IPR011690 Phosphate-starvation-induced PsiF repeat CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 Pfam PF07729 FCD domain 100 222 2.5E-23 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 SUPERFAMILY SSF48008 98 230 9.68E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 Pfam PF00392 Bacterial regulatory proteins, gntR family 8 71 8.3E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 1.5E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 1.5E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 SUPERFAMILY SSF46785 6 75 1.36E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 Gene3D G3DSA:1.20.120.530 82 244 8.6E-30 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 SMART SM00345 12 71 2.0E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 Gene3D G3DSA:1.10.10.10 3 73 9.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00690 82fdc03490bdf7e0b6810f312f4395b9 258 SMART SM00895 100 224 2.8E-21 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS09875 eca2d22098649cd8e0b5dde063eb50ac 157 SUPERFAMILY SSF55804 6 153 1.23E-39 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS09875 eca2d22098649cd8e0b5dde063eb50ac 157 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 10 152 2.9E-41 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS09875 eca2d22098649cd8e0b5dde063eb50ac 157 TIGRFAM TIGR00848 fruA: PTS system, fructose subfamily, IIA component 10 138 1.6E-38 T 28-03-2018 IPR004715 Phosphotransferase system, IIA component fructose subfamily GO:0008982|GO:0009401|GO:0016021 CI104_RS09875 eca2d22098649cd8e0b5dde063eb50ac 157 Gene3D G3DSA:3.40.930.10 5 155 4.3E-40 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS27790 186fe846e9ffebd9e9fc0d76aae1a873 74 Pfam PF05509 TraY domain 16 60 2.8E-17 T 28-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 CI104_RS23065 eff2ecf77d5aeeb4e14c58a8a2204094 262 Gene3D G3DSA:3.40.50.300 1 261 1.0E-59 T 28-03-2018 CI104_RS23065 eff2ecf77d5aeeb4e14c58a8a2204094 262 SMART SM00382 29 229 1.3E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23065 eff2ecf77d5aeeb4e14c58a8a2204094 262 SUPERFAMILY SSF52540 3 238 1.49E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23065 eff2ecf77d5aeeb4e14c58a8a2204094 262 TIGRFAM TIGR02315 ABC_phnC: phosphonate ABC transporter, ATP-binding protein 4 250 1.5E-103 T 28-03-2018 IPR012693 ABC transporter, phosphonate import, PhnC GO:0005524|GO:0015416|GO:0015716|GO:0016020 CI104_RS23065 eff2ecf77d5aeeb4e14c58a8a2204094 262 Pfam PF00005 ABC transporter 20 181 2.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23065 eff2ecf77d5aeeb4e14c58a8a2204094 262 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS26740 56b05343209d03b279442e023326eb9d 301 SUPERFAMILY SSF56112 38 262 1.06E-31 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS26740 56b05343209d03b279442e023326eb9d 301 Gene3D G3DSA:3.30.200.20 1 106 1.2E-5 T 28-03-2018 CI104_RS26740 56b05343209d03b279442e023326eb9d 301 Gene3D G3DSA:3.90.1200.10 110 299 3.1E-16 T 28-03-2018 CI104_RS26740 56b05343209d03b279442e023326eb9d 301 Pfam PF01636 Phosphotransferase enzyme family 41 263 1.9E-25 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CI104_RS07070 cdf9e10f62a07d21ba4945c62a0c747e 420 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 211 397 9.5E-32 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS07070 cdf9e10f62a07d21ba4945c62a0c747e 420 Pfam PF00529 HlyD membrane-fusion protein of T1SS 255 384 4.7E-6 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS07070 cdf9e10f62a07d21ba4945c62a0c747e 420 SUPERFAMILY SSF111369 124 324 1.96E-11 T 28-03-2018 CI104_RS07070 cdf9e10f62a07d21ba4945c62a0c747e 420 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 115 319 1.6E-58 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS07070 cdf9e10f62a07d21ba4945c62a0c747e 420 Gene3D G3DSA:2.40.50.100 127 245 1.4E-9 T 28-03-2018 CI104_RS15035 ac1b2c5b7910dba8a664ea35efa0911d 60 Pfam PF08956 Domain of unknown function (DUF1869) 3 60 1.1E-31 T 28-03-2018 IPR015051 Protein YoaG CI104_RS15035 ac1b2c5b7910dba8a664ea35efa0911d 60 SUPERFAMILY SSF103063 1 60 8.63E-32 T 28-03-2018 IPR015051 Protein YoaG CI104_RS15035 ac1b2c5b7910dba8a664ea35efa0911d 60 Gene3D G3DSA:3.30.160.220 3 55 2.0E-28 T 28-03-2018 IPR015051 Protein YoaG CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Pfam PF02824 TGS domain 388 447 2.3E-21 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Pfam PF13291 ACT domain 623 700 7.1E-15 T 28-03-2018 IPR002912 ACT domain CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 SUPERFAMILY SSF81271 375 447 3.71E-21 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 SUPERFAMILY SSF81301 180 392 2.13E-62 T 28-03-2018 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 26 700 1.2E-292 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Gene3D G3DSA:3.10.20.30 382 457 6.4E-24 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 SMART SM00471 41 153 1.2E-11 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 SUPERFAMILY SSF109604 3 190 4.08E-75 T 28-03-2018 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 SUPERFAMILY SSF55021 628 700 3.85E-5 T 28-03-2018 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Gene3D G3DSA:3.30.460.10 188 325 7.2E-40 T 28-03-2018 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Pfam PF13328 HD domain 26 175 3.0E-53 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 SMART SM00954 235 345 1.1E-62 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Pfam PF04607 Region found in RelA / SpoT proteins 235 345 1.9E-35 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CI104_RS00455 7ef2735ac8eec9f42d52cc2b0a28d9ff 703 Gene3D G3DSA:3.30.70.260 624 702 9.5E-9 T 28-03-2018 CI104_RS23565 6622c12aff7bb547cd1497f755919371 406 Gene3D G3DSA:3.40.50.720 188 310 1.2E-4 T 28-03-2018 CI104_RS23565 6622c12aff7bb547cd1497f755919371 406 Gene3D G3DSA:3.90.180.10 2 187 2.8E-23 T 28-03-2018 CI104_RS23565 6622c12aff7bb547cd1497f755919371 406 Pfam PF00107 Zinc-binding dehydrogenase 187 325 5.2E-12 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS23565 6622c12aff7bb547cd1497f755919371 406 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 104 4.7E-6 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS23565 6622c12aff7bb547cd1497f755919371 406 SUPERFAMILY SSF50129 4 189 7.16E-24 T 28-03-2018 IPR011032 GroES-like CI104_RS23565 6622c12aff7bb547cd1497f755919371 406 SUPERFAMILY SSF51735 169 330 2.31E-15 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01470 1bbb34eda5b991d337dccb946f575d32 438 SUPERFAMILY SSF53850 25 425 4.02E-74 T 28-03-2018 CI104_RS01470 1bbb34eda5b991d337dccb946f575d32 438 ProSitePatterns PS01037 Bacterial extracellular solute-binding proteins, family 1 signature. 140 157 - T 28-03-2018 IPR006061 Solute-binding family 1, conserved site GO:0006810 CI104_RS01470 1bbb34eda5b991d337dccb946f575d32 438 Gene3D G3DSA:3.40.190.10 141 434 1.3E-43 T 28-03-2018 CI104_RS01470 1bbb34eda5b991d337dccb946f575d32 438 Pfam PF13416 Bacterial extracellular solute-binding protein 44 367 1.7E-42 T 28-03-2018 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 Gene3D G3DSA:3.30.360.10 165 318 7.3E-53 T 28-03-2018 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 SMART SM00846 3 155 2.6E-79 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 SUPERFAMILY SSF51735 1 179 1.32E-55 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 TIGRFAM TIGR01532 E4PD_g-proteo: erythrose-4-phosphate dehydrogenase 4 328 3.6E-195 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 104 3.1E-34 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 Gene3D G3DSA:3.40.50.720 1 164 8.3E-66 T 28-03-2018 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 153 160 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 160 316 6.3E-55 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 Hamap MF_01640 D-erythrose-4-phosphate dehydrogenase [epd]. 2 337 65.871 T 28-03-2018 IPR006422 D-erythrose-4-phosphate dehydrogenase GO:0005737|GO:0042823|GO:0048001|GO:0051287|GO:0055114 KEGG: 00750+1.2.1.72 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 PIRSF PIRSF000149 1 337 2.4E-134 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 SUPERFAMILY SSF55347 155 317 1.58E-58 T 28-03-2018 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 176 192 7.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 272 287 7.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 149 167 7.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 112 125 7.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS04335 f069a28c59dcd2d33ffeed10e20df3a8 339 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 232 249 7.0E-29 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 SUPERFAMILY SSF69279 203 382 1.6E-43 T 28-03-2018 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 SUPERFAMILY SSF69279 15 191 6.38E-48 T 28-03-2018 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 18 513 7.4E-74 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 Pfam PF05954 Phage late control gene D protein (GPD) 33 355 1.0E-61 T 28-03-2018 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 26 516 6.5E-142 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 Pfam PF10106 Uncharacterized protein conserved in bacteria (DUF2345) 611 758 5.1E-49 T 28-03-2018 IPR018769 Domain of unknown function DUF2345, Vgr C-terminal CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 SUPERFAMILY SSF69255 382 472 2.2E-26 T 28-03-2018 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 Gene3D G3DSA:2.40.50.230 388 472 8.0E-23 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 Gene3D G3DSA:4.10.180.10 296 311 2.4E-7 T 28-03-2018 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 Gene3D G3DSA:3.55.50.10 111 207 1.6E-26 T 28-03-2018 CI104_RS09700 1d437a6519d31e397a1db8bacf3a4dab 789 Pfam PF13296 Putative type VI secretion system Rhs element Vgr 490 591 1.4E-33 T 28-03-2018 IPR028244 Putative type VI secretion system, Rhs element associated Vgr domain CI104_RS13445 1d985fec1c8eeafbb70e7ace2cb8d4a1 653 Pfam PF12392 Collagenase 391 505 4.9E-17 T 28-03-2018 IPR020988 Peptidase U32, collagenase CI104_RS13445 1d985fec1c8eeafbb70e7ace2cb8d4a1 653 ProSitePatterns PS01276 Peptidase family U32 signature. 161 179 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS13445 1d985fec1c8eeafbb70e7ace2cb8d4a1 653 Gene3D G3DSA:3.20.20.70 6 171 3.1E-8 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS13445 1d985fec1c8eeafbb70e7ace2cb8d4a1 653 Pfam PF01136 Peptidase family U32 79 305 1.0E-71 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS08990 7c08dea7ad5e0958a1fe0cec720de2f6 91 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 84 5.8E-12 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS08990 7c08dea7ad5e0958a1fe0cec720de2f6 91 Gene3D G3DSA:3.40.50.2300 1 90 6.5E-14 T 28-03-2018 CI104_RS08990 7c08dea7ad5e0958a1fe0cec720de2f6 91 SUPERFAMILY SSF52794 1 88 6.28E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 Pfam PF06580 Histidine kinase 371 448 1.1E-25 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 SUPERFAMILY SSF55874 424 557 9.04E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 Pfam PF07694 5TMR of 5TMR-LYT 28 196 3.9E-59 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 SMART SM00065 218 365 2.8E-11 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 Gene3D G3DSA:3.30.565.10 385 558 1.7E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 Gene3D G3DSA:3.30.450.40 232 374 2.0E-7 T 28-03-2018 IPR029016 GAF domain-like CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 SUPERFAMILY SSF55781 243 359 3.92E-8 T 28-03-2018 IPR029016 GAF domain-like CI104_RS16725 fd88335f5f5d99ac605f4fdcf7793b37 562 Pfam PF13185 GAF domain 243 352 1.6E-6 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS18495 13b5214f1733a84d0cf3cfa03a512694 63 Pfam PF11119 Protein of unknown function (DUF2633) 9 62 2.3E-32 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 CI104_RS18495 13b5214f1733a84d0cf3cfa03a512694 63 ProDom PD053432 MEMBRANE TRANSMEMBRANE YFGG INNER EXPORTED Y1396 PRECURSOR SIGNAL 1 63 8.0E-27 T 28-03-2018 IPR022576 Protein of unknown function DUF2633 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 TIGRFAM TIGR00746 arcC: carbamate kinase 3 300 5.9E-111 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PIRSF PIRSF000723 1 301 2.7E-107 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 SUPERFAMILY SSF53633 3 299 3.67E-68 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 Gene3D G3DSA:3.40.1160.10 1 301 4.0E-44 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 Pfam PF00696 Amino acid kinase family 3 281 3.0E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 256 271 2.4E-53 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 104 123 2.4E-53 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 205 220 2.4E-53 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 152 171 2.4E-53 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 175 193 2.4E-53 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 43 62 2.4E-53 T 28-03-2018 CI104_RS04350 e97aaea3f941efd00e5a605a34308cad 301 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 2.4E-53 T 28-03-2018 CI104_RS18800 58c17e1c4531fad74483472bd19b93c9 243 Pfam PF03740 Pyridoxal phosphate biosynthesis protein PdxJ 6 238 2.9E-106 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CI104_RS18800 58c17e1c4531fad74483472bd19b93c9 243 SUPERFAMILY SSF63892 4 241 3.01E-102 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CI104_RS18800 58c17e1c4531fad74483472bd19b93c9 243 Gene3D G3DSA:3.20.20.70 4 238 1.1E-106 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18800 58c17e1c4531fad74483472bd19b93c9 243 Hamap MF_00279 Pyridoxine 5'-phosphate synthase [pdxJ]. 1 243 135.119 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CI104_RS18800 58c17e1c4531fad74483472bd19b93c9 243 TIGRFAM TIGR00559 pdxJ: pyridoxine 5'-phosphate synthase 6 239 6.0E-114 T 28-03-2018 IPR004569 Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ GO:0005737|GO:0008615|GO:0033856 KEGG: 00750+2.6.99.2 CI104_RS25210 9a35afcfb603d2dfdee4c8886bd47402 319 Gene3D G3DSA:1.10.3720.10 12 306 3.5E-32 T 28-03-2018 CI104_RS25210 9a35afcfb603d2dfdee4c8886bd47402 319 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 95 304 1.0E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS25210 9a35afcfb603d2dfdee4c8886bd47402 319 SUPERFAMILY SSF161098 28 303 2.75E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS25210 9a35afcfb603d2dfdee4c8886bd47402 319 TIGRFAM TIGR02138 phosphate_pstC: phosphate ABC transporter, permease protein PstC 16 311 1.5E-93 T 28-03-2018 IPR011864 Phosphate ABC transporter, permease protein PstC GO:0005315|GO:0006817|GO:0016021 CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 149 160 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 SUPERFAMILY SSF46548 107 236 1.41E-39 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 SUPERFAMILY SSF54292 1 106 7.36E-30 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 Gene3D G3DSA:3.10.20.30 1 106 3.5E-32 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 Pfam PF13085 2Fe-2S iron-sulfur cluster binding domain 5 111 9.0E-31 T 28-03-2018 IPR025192 Succinate dehydogenase/fumarate reductase N-terminal GO:0009055|GO:0051536 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 Gene3D G3DSA:1.10.1060.10 107 238 6.3E-29 T 28-03-2018 CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 TIGRFAM TIGR00384 dhsB: succinate dehydrogenase and fumarate reductase iron-sulfur protein 7 230 6.0E-91 T 28-03-2018 IPR004489 Succinate dehydrogenase/fumarate reductase iron-sulphur protein GO:0006099|GO:0016491|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07905 7a920c9fe61d3cedee3c0e284e9987c3 238 Pfam PF13534 4Fe-4S dicluster domain 148 221 3.5E-10 T 28-03-2018 CI104_RS04685 10e47c93f63ce8f724679883597d4241 77 Pfam PF06004 Bacterial protein of unknown function (DUF903) 26 74 2.1E-19 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CI104_RS04685 10e47c93f63ce8f724679883597d4241 77 SUPERFAMILY SSF50182 23 75 1.53E-15 T 28-03-2018 IPR010920 LSM domain CI104_RS04685 10e47c93f63ce8f724679883597d4241 77 Gene3D G3DSA:2.30.30.100 23 75 6.7E-26 T 28-03-2018 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SMART SM00248 107 132 1500.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SMART SM00248 138 172 170.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SMART SM00248 176 201 1300.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SMART SM00248 5 34 3000.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SMART SM00248 38 67 0.0015 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SMART SM00248 71 100 150.0 T 28-03-2018 IPR002110 Ankyrin repeat GO:0005515 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 SUPERFAMILY SSF48403 7 199 1.24E-42 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 Gene3D G3DSA:1.25.40.20 115 201 2.4E-21 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 Pfam PF13637 Ankyrin repeats (many copies) 11 59 1.5E-9 T 28-03-2018 CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 Pfam PF12796 Ankyrin repeats (3 copies) 79 174 4.0E-8 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CI104_RS20555 5b228d822dabf42701fa7fef8786b119 201 Gene3D G3DSA:1.25.40.20 2 114 1.2E-23 T 28-03-2018 IPR020683 Ankyrin repeat-containing domain CI104_RS20340 137ef86e192aa5715bc7183e6c8bacf6 187 PIRSF PIRSF004525 1 187 1.3E-63 T 28-03-2018 IPR016419 Prepilin peptidase-dependent protein B, predicted CI104_RS20340 137ef86e192aa5715bc7183e6c8bacf6 187 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 6 28 9.8E-8 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS20340 137ef86e192aa5715bc7183e6c8bacf6 187 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 6 26 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS20340 137ef86e192aa5715bc7183e6c8bacf6 187 Pfam PF07963 Prokaryotic N-terminal methylation motif 4 27 9.6E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 SUPERFAMILY SSF52343 100 231 4.71E-35 T 28-03-2018 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 SUPERFAMILY SSF63380 3 97 1.97E-23 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 Gene3D G3DSA:3.40.50.80 99 233 6.2E-25 T 28-03-2018 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 Pfam PF00175 Oxidoreductase NAD-binding domain 108 211 1.3E-22 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 Pfam PF00970 Oxidoreductase FAD-binding domain 6 95 1.2E-6 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 31 43 2.0E-13 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 91 100 2.0E-13 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 107 126 2.0E-13 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 132 141 2.0E-13 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 PRINTS PR00410 Phenol hydroxylase reductase family signature 47 54 2.0E-13 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS24660 45895f00685cd6d342654a7a12d85f57 233 Gene3D G3DSA:2.40.30.10 2 98 3.6E-18 T 28-03-2018 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 SUPERFAMILY SSF51366 15 240 2.16E-77 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 Hamap MF_01200_B Orotidine 5'-phosphate decarboxylase [pyrF]. 14 242 39.5 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 SMART SM00934 16 237 4.5E-98 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 15 237 3.5E-51 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 ProSitePatterns PS00156 Orotidine 5'-phosphate decarboxylase active site. 68 81 - T 28-03-2018 IPR018089 Orotidine 5'-phosphate decarboxylase, active site GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 Gene3D G3DSA:3.20.20.70 11 242 3.7E-69 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14065 cb1778b2d3b36cd2710829b3602233ac 245 TIGRFAM TIGR01740 pyrF: orotidine 5'-phosphate decarboxylase 17 237 2.0E-54 T 28-03-2018 IPR014732 Orotidine 5'-phosphate decarboxylase GO:0004590|GO:0044205 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS16275 870e7e9e584be6122d12147085bd0862 150 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 141 5.7E-56 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CI104_RS16275 870e7e9e584be6122d12147085bd0862 150 Gene3D G3DSA:3.40.50.300 2 145 9.3E-14 T 28-03-2018 CI104_RS16275 870e7e9e584be6122d12147085bd0862 150 SUPERFAMILY SSF52540 3 140 6.32E-16 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16275 870e7e9e584be6122d12147085bd0862 150 PIRSF PIRSF036409 1 146 6.0E-56 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CI104_RS16275 870e7e9e584be6122d12147085bd0862 150 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 142 1.7E-55 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CI104_RS21470 4fc98e1298e075c677839e666e395f90 293 Pfam PF01263 Aldose 1-epimerase 31 275 1.4E-28 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CI104_RS21470 4fc98e1298e075c677839e666e395f90 293 PIRSF PIRSF016020 9 290 6.3E-40 T 28-03-2018 IPR025532 Glucose-6-phosphate 1-epimerase KEGG: 00010+5.1.3.15 CI104_RS21470 4fc98e1298e075c677839e666e395f90 293 Gene3D G3DSA:2.70.98.10 2 293 1.4E-44 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS21470 4fc98e1298e075c677839e666e395f90 293 SUPERFAMILY SSF74650 10 272 1.1E-55 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 Gene3D G3DSA:1.10.10.10 97 170 1.3E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 Hamap MF_01584 UPF0502 protein YceH [yceH]. 5 211 34.416 T 28-03-2018 IPR007432 Protein of unknown function DUF480 CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 Gene3D G3DSA:1.10.10.10 2 87 3.2E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 SUPERFAMILY SSF46785 90 172 1.52E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 SUPERFAMILY SSF46785 2 84 8.16E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 Gene3D G3DSA:1.20.5.190 171 211 0.0026 T 28-03-2018 CI104_RS10390 d1e9d776ec4acf5deb6fc159f0a472f3 215 Pfam PF04337 Protein of unknown function, DUF480 5 158 3.4E-63 T 28-03-2018 IPR007432 Protein of unknown function DUF480 CI104_RS17945 c41d909cc79a39964e8a86cbb9c92917 412 SUPERFAMILY SSF53383 10 394 1.88E-107 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS17945 c41d909cc79a39964e8a86cbb9c92917 412 Gene3D G3DSA:3.40.640.10 51 302 4.8E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS17945 c41d909cc79a39964e8a86cbb9c92917 412 Gene3D G3DSA:3.90.1150.10 303 398 1.1E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS17945 c41d909cc79a39964e8a86cbb9c92917 412 Pfam PF00155 Aminotransferase class I and II 37 376 2.4E-59 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 SUPERFAMILY SSF81593 207 328 5.57E-10 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Pfam PF08335 GlnD PII-uridylyltransferase 193 331 1.4E-36 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Gene3D G3DSA:3.30.460.10 52 186 2.8E-23 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 SUPERFAMILY SSF55021 705 763 6.25E-9 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Gene3D G3DSA:1.10.3090.10 363 655 2.5E-36 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 SMART SM00471 464 611 2.5E-11 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 SUPERFAMILY SSF55021 815 874 1.41E-9 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 SUPERFAMILY SSF109604 457 600 6.91E-14 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Pfam PF01842 ACT domain 709 759 4.4E-7 T 28-03-2018 IPR002912 ACT domain CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Pfam PF01842 ACT domain 817 874 5.6E-9 T 28-03-2018 IPR002912 ACT domain CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Pfam PF01909 Nucleotidyltransferase domain 86 147 7.1E-7 T 28-03-2018 IPR002934 Polymerase, nucleotidyl transferase domain GO:0016779 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Hamap MF_00277 Bifunctional uridylyltransferase/uridylyl-removing enzyme [glnD]. 1 890 348.303 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 PIRSF PIRSF006288 22 889 0.0 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 SUPERFAMILY SSF81301 32 189 1.01E-20 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Gene3D G3DSA:3.30.70.260 701 784 7.4E-9 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Gene3D G3DSA:3.30.70.260 809 886 8.5E-11 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 TIGRFAM TIGR01693 UTase_glnD: protein-P-II uridylyltransferase 51 884 8.7E-300 T 28-03-2018 IPR010043 Bifunctional uridylyltransferase/uridylyl-removing enzyme GO:0006807|GO:0008773 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Gene3D G3DSA:1.20.120.330 190 334 2.0E-25 T 28-03-2018 CI104_RS05275 7b73aecfa8bd05e7cc40c71561bc8118 890 Pfam PF01966 HD domain 468 601 6.8E-15 T 28-03-2018 IPR006674 HD domain CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 10 199 4.5E-46 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 Gene3D G3DSA:3.40.50.300 4 213 2.9E-56 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 TIGRFAM TIGR00235 udk: uridine kinase 5 213 2.8E-98 T 28-03-2018 IPR000764 Uridine kinase-like KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193|Reactome: R-HSA-73614 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 PRINTS PR00988 Uridine kinase signature 157 168 3.7E-39 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 PRINTS PR00988 Uridine kinase signature 8 25 3.7E-39 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 PRINTS PR00988 Uridine kinase signature 143 153 3.7E-39 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 PRINTS PR00988 Uridine kinase signature 179 192 3.7E-39 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 PRINTS PR00988 Uridine kinase signature 87 102 3.7E-39 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 PRINTS PR00988 Uridine kinase signature 42 53 3.7E-39 T 28-03-2018 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 Hamap MF_00551 Uridine kinase [udk]. 5 213 41.917 T 28-03-2018 IPR026008 Uridine kinase GO:0004849|GO:0005524|GO:0016773 KEGG: 00240+2.7.1.48|KEGG: 00983+2.7.1.48|MetaCyc: PWY-7193 CI104_RS16585 7361242439ce8c819b352b5f5a1ee3e4 213 SUPERFAMILY SSF52540 8 205 1.06E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 Gene3D G3DSA:3.40.50.720 1 245 7.2E-65 T 28-03-2018 CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 140 168 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 244 4.6E-54 T 28-03-2018 CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 2.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 2.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 2.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 SUPERFAMILY SSF51735 3 244 3.31E-69 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 4 189 7.7E-7 T 28-03-2018 CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 207 227 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 5 22 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS22825 59c5b0507ef76605b7033ff4965970e4 245 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 2.0E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21825 35a91219b7545d978340e857b19e380a 74 Pfam PF13443 Cro/C1-type HTH DNA-binding domain 6 67 1.8E-21 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS21825 35a91219b7545d978340e857b19e380a 74 SMART SM00530 6 62 1.1E-4 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS21825 35a91219b7545d978340e857b19e380a 74 SUPERFAMILY SSF47413 1 67 1.77E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS21825 35a91219b7545d978340e857b19e380a 74 Gene3D G3DSA:1.10.260.40 2 72 7.8E-11 T 28-03-2018 CI104_RS01860 501b739815d6a49dc344d263d1949864 269 Gene3D G3DSA:1.20.1080.10 2 260 6.9E-61 T 28-03-2018 IPR023271 Aquaporin-like Reactome: R-HSA-432047 CI104_RS01860 501b739815d6a49dc344d263d1949864 269 Pfam PF01226 Formate/nitrite transporter 20 247 2.2E-57 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CI104_RS01860 501b739815d6a49dc344d263d1949864 269 TIGRFAM TIGR00790 fnt: formate/nitrite transporter 21 250 2.9E-83 T 28-03-2018 IPR000292 Formate/nitrite transporter GO:0005215|GO:0006810|GO:0016020 CI104_RS01860 501b739815d6a49dc344d263d1949864 269 ProSitePatterns PS01005 Formate and nitrite transporters signature 1. 73 82 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CI104_RS01860 501b739815d6a49dc344d263d1949864 269 ProSitePatterns PS01006 Formate and nitrite transporters signature 2. 157 167 - T 28-03-2018 IPR024002 Formate/nitrite transporter, conserved site CI104_RS06730 99b10b6873c2c5cccf835880430d0522 196 Pfam PF09684 Phage tail protein (Tail_P2_I) 32 120 8.6E-5 T 28-03-2018 IPR006521 Tail protein I CI104_RS11645 51198520a9a36a1646508dfbefbe2698 417 ProSitePatterns PS01095 Chitinases family 18 active site. 145 153 - T 28-03-2018 IPR001579 Glycoside hydrolase, chitinase active site GO:0004553|GO:0005975 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CI104_RS11645 51198520a9a36a1646508dfbefbe2698 417 SUPERFAMILY SSF51445 15 276 4.99E-72 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS11645 51198520a9a36a1646508dfbefbe2698 417 SUPERFAMILY SSF51445 372 403 4.99E-72 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS11645 51198520a9a36a1646508dfbefbe2698 417 Pfam PF00704 Glycosyl hydrolases family 18 26 400 3.3E-64 T 28-03-2018 IPR001223 Glycoside hydrolase family 18, catalytic domain GO:0005975 CI104_RS11645 51198520a9a36a1646508dfbefbe2698 417 Gene3D G3DSA:3.20.20.80 14 417 4.1E-78 T 28-03-2018 CI104_RS11645 51198520a9a36a1646508dfbefbe2698 417 SMART SM00636 23 400 3.4E-70 T 28-03-2018 IPR011583 Chitinase II GO:0008061 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 Gene3D G3DSA:1.20.59.10 3 83 5.4E-24 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 PIRSF PIRSF001499 1 373 1.8E-184 T 28-03-2018 IPR008244 Bifunctional chorismate mutase/prephenate dehydrogenase T-protein GO:0004106|GO:0005737|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 Pfam PF02153 Prephenate dehydrogenase 137 344 1.1E-29 T 28-03-2018 IPR003099 Prephenate dehydrogenase GO:0004665|GO:0006571|GO:0008977|GO:0055114 KEGG: 00400+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-7303 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 Pfam PF01817 Chorismate mutase type II 9 86 8.1E-20 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 SMART SM00830 9 89 9.3E-31 T 28-03-2018 IPR002701 Chorismate mutase GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 SUPERFAMILY SSF51735 91 238 1.02E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 SUPERFAMILY SSF48600 4 88 3.3E-23 T 28-03-2018 IPR020822 Chorismate mutase, type II GO:0046417 KEGG: 00400+5.4.99.5|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7626 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 Gene3D G3DSA:3.40.50.720 84 247 1.0E-25 T 28-03-2018 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 Gene3D G3DSA:1.10.3660.10 249 372 2.3E-33 T 28-03-2018 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 TIGRFAM TIGR01799 CM_T: chorismate mutase 5 87 2.5E-45 T 28-03-2018 IPR011277 Chorismate mutase, T-protein GO:0004106|GO:0005737|GO:0006571|GO:0055114 KEGG: 00400+5.4.99.5+1.3.1.12|KEGG: 00401+1.3.1.12|MetaCyc: PWY-3461|MetaCyc: PWY-3462|MetaCyc: PWY-6120|MetaCyc: PWY-6627|MetaCyc: PWY-7303|MetaCyc: PWY-7626 CI104_RS18975 efb51520c1f96bc0ac801083ad0de97d 373 SUPERFAMILY SSF48179 241 366 2.38E-42 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 Gene3D G3DSA:1.20.1250.20 204 414 1.0E-23 T 28-03-2018 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 ProSitePatterns PS00896 LacY family proton/sugar symporters signature 1. 67 81 - T 28-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 ProSitePatterns PS00897 LacY family proton/sugar symporters signature 2. 278 292 - T 28-03-2018 IPR018457 LacY/RafB permease family, conserved site GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 Pfam PF01306 LacY proton/sugar symporter 5 407 1.2E-185 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 Gene3D G3DSA:1.20.1250.20 6 195 1.4E-16 T 28-03-2018 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 TIGRFAM TIGR00882 2A0105: oligosaccharide:H+ symporter 9 399 6.0E-173 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 SUPERFAMILY SSF103473 12 403 7.19E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 258 279 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 106 128 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 313 332 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 211 239 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 344 364 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 71 100 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 282 308 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS22240 dd70448e20d190dbc16469bb0d73ca39 415 PRINTS PR00174 LacY proton/sugar symporter family signature 148 166 1.6E-88 T 28-03-2018 IPR000576 LacY/RafB permease family GO:0006810|GO:0016020 CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 159 178 1.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 139 147 1.6E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 146 174 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 6.7E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 133 149 6.7E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 6.7E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 6.7E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 6.7E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 159 178 6.7E-36 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 SUPERFAMILY SSF51735 4 253 2.32E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 16 251 9.4E-63 T 28-03-2018 CI104_RS12975 7f9ec108381925fff31f22abd6a033e1 255 Gene3D G3DSA:3.40.50.720 1 255 2.1E-72 T 28-03-2018 CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 Pfam PF07690 Major Facilitator Superfamily 19 413 3.3E-53 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 Gene3D G3DSA:1.20.1250.20 255 503 2.7E-32 T 28-03-2018 CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 Gene3D G3DSA:1.20.1250.20 13 203 1.7E-33 T 28-03-2018 CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 SUPERFAMILY SSF103473 475 500 4.05E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 SUPERFAMILY SSF103473 9 196 4.05E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 SUPERFAMILY SSF103473 251 423 4.05E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS19630 5fb88355cb8cdab1498fa64bc8e563ea 512 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 13 498 4.5E-218 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CI104_RS03435 ec97c86a5260054f7a24c6a19acbc445 169 Pfam PF06892 Phage regulatory protein CII (CP76) 4 160 7.4E-71 T 28-03-2018 IPR009679 Bacteriophage 186, CII CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Gene3D G3DSA:3.30.70.20 43 113 1.2E-21 T 28-03-2018 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Pfam PF13247 4Fe-4S dicluster domain 92 188 5.6E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 289 3.1E-146 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Gene3D G3DSA:3.30.70.20 14 42 0.0041 T 28-03-2018 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Gene3D G3DSA:3.30.70.20 114 152 2.5E-16 T 28-03-2018 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 SUPERFAMILY SSF54862 28 272 3.77E-73 T 28-03-2018 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Gene3D G3DSA:3.30.70.20 153 256 1.9E-23 T 28-03-2018 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 288 1.6E-21 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 Gene3D G3DSA:1.20.5.480 257 290 6.3E-22 T 28-03-2018 CI104_RS24395 ad46e2efd554578e2f09944b7cf655ac 301 PIRSF PIRSF036298 1 301 6.1E-166 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CI104_RS18285 2b16d9d56a8a95e7cf7eca789d6aff07 338 TIGRFAM TIGR00651 pta: phosphate acetyltransferase 17 319 4.8E-98 T 28-03-2018 IPR004614 Phosphate acetyltransferase GO:0016407 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS18285 2b16d9d56a8a95e7cf7eca789d6aff07 338 Pfam PF01515 Phosphate acetyl/butaryl transferase 2 320 8.0E-119 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS18285 2b16d9d56a8a95e7cf7eca789d6aff07 338 Gene3D G3DSA:3.40.50.10750 140 296 1.5E-56 T 28-03-2018 CI104_RS18285 2b16d9d56a8a95e7cf7eca789d6aff07 338 Gene3D G3DSA:3.40.50.2300 3 123 2.1E-4 T 28-03-2018 CI104_RS18285 2b16d9d56a8a95e7cf7eca789d6aff07 338 PIRSF PIRSF000428 1 327 1.7E-107 T 28-03-2018 IPR012147 Phosphate acetyl/butyryltransferase GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS18285 2b16d9d56a8a95e7cf7eca789d6aff07 338 SUPERFAMILY SSF53659 2 321 3.87E-81 T 28-03-2018 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 Gene3D G3DSA:3.40.50.2000 1 179 7.2E-46 T 28-03-2018 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 SUPERFAMILY SSF53756 6 353 1.66E-130 T 28-03-2018 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 TIGRFAM TIGR01133 murG: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase 1 347 1.1E-112 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 Pfam PF04101 Glycosyltransferase family 28 C-terminal domain 185 344 6.6E-36 T 28-03-2018 IPR007235 Glycosyl transferase, family 28, C-terminal GO:0016758 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 Pfam PF03033 Glycosyltransferase family 28 N-terminal domain 9 145 1.2E-48 T 28-03-2018 IPR004276 Glycosyltransferase family 28, N-terminal domain GO:0005975|GO:0016758|GO:0030259 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 Gene3D G3DSA:3.40.50.2000 180 347 4.0E-30 T 28-03-2018 CI104_RS04900 79ad8fed5126ee916bfce2d7786a961a 355 Hamap MF_00033 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [murG]. 8 353 35.021 T 28-03-2018 IPR006009 N-acetylglucosaminyltransferase, MurG GO:0009252|GO:0050511 KEGG: 00052+2.4.1.22|KEGG: 00550+2.4.1.227|MetaCyc: PWY-5265|MetaCyc: PWY-6385|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS11750 83979891009c78c4f598eea3098fed05 435 ProSitePatterns PS00380 Rhodanese signature 1. 181 192 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CI104_RS11750 83979891009c78c4f598eea3098fed05 435 ProSitePatterns PS00683 Rhodanese C-terminal signature. 406 416 - T 28-03-2018 IPR001307 Thiosulphate sulfurtransferase, conserved site GO:0004792 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CI104_RS11750 83979891009c78c4f598eea3098fed05 435 Gene3D G3DSA:3.40.250.10 284 435 8.5E-27 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 SUPERFAMILY SSF52821 288 428 2.88E-31 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 Gene3D G3DSA:3.40.250.10 139 283 7.2E-27 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 Gene3D G3DSA:3.40.250.10 21 132 6.8E-8 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 SMART SM00450 146 267 8.9E-18 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 SMART SM00450 27 139 0.41 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 SMART SM00450 294 422 5.4E-16 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 SUPERFAMILY SSF52821 34 127 3.43E-8 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 Pfam PF00581 Rhodanese-like domain 297 418 7.6E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 Pfam PF00581 Rhodanese-like domain 179 263 3.0E-11 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS11750 83979891009c78c4f598eea3098fed05 435 SUPERFAMILY SSF52821 141 274 3.01E-26 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS23385 d54eefb4bb898cb5b360186222201cd0 122 Gene3D G3DSA:1.10.3830.10 7 119 1.4E-42 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CI104_RS23385 d54eefb4bb898cb5b360186222201cd0 122 Pfam PF01219 Prokaryotic diacylglycerol kinase 16 117 7.1E-35 T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CI104_RS23385 d54eefb4bb898cb5b360186222201cd0 122 ProSitePatterns PS01069 Prokaryotic diacylglycerol kinase signature. 70 81 - T 28-03-2018 IPR000829 DAGK family GO:0004143|GO:0008654|GO:0016020 KEGG: 00500+2.7.1.10|KEGG: 00561+2.7.1.107|KEGG: 00564+2.7.1.107|KEGG: 04070+2.7.1.107|MetaCyc: PWY-7039|MetaCyc: PWY-7817 CI104_RS12450 d88f11d115dfd910d366ed4d97932494 155 Pfam PF05433 Glycine zipper 2TM domain 62 102 2.4E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 SUPERFAMILY SSF48179 280 483 1.46E-66 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 Gene3D G3DSA:3.40.50.720 1 278 9.1E-108 T 28-03-2018 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 Gene3D G3DSA:1.10.1040.10 279 486 3.8E-70 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 213 459 6.4E-99 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 23 185 1.7E-51 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 215 227 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 PRINTS PR00084 Mannitol dehydrogenase signature 24 34 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 PRINTS PR00084 Mannitol dehydrogenase signature 245 260 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 PRINTS PR00084 Mannitol dehydrogenase signature 176 189 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 PRINTS PR00084 Mannitol dehydrogenase signature 215 228 1.7E-21 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS12775 b99cab676ec33c2e0c2fdc227f76d2c4 488 SUPERFAMILY SSF51735 4 278 8.27E-98 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS27880 800156108e22453be0044e7eb6fc2b94 86 Pfam PF06440 DNA polymerase III, theta subunit 5 73 1.5E-33 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS27880 800156108e22453be0044e7eb6fc2b94 86 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 7 71 2.0E-10 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS27880 800156108e22453be0044e7eb6fc2b94 86 SUPERFAMILY SSF46575 3 83 6.67E-35 T 28-03-2018 CI104_RS27880 800156108e22453be0044e7eb6fc2b94 86 Gene3D G3DSA:1.20.58.250 6 68 2.8E-28 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 SUPERFAMILY SSF49354 18 140 4.97E-40 T 28-03-2018 IPR008962 PapD-like CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 Gene3D G3DSA:2.60.40.10 24 138 3.6E-37 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 PRINTS PR00969 Pili chaperone signature 98 115 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 PRINTS PR00969 Pili chaperone signature 157 172 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 PRINTS PR00969 Pili chaperone signature 122 137 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 PRINTS PR00969 Pili chaperone signature 70 91 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 PRINTS PR00969 Pili chaperone signature 24 33 3.7E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 SUPERFAMILY SSF49584 141 219 8.63E-24 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 97 114 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 162 218 3.7E-16 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 Gene3D G3DSA:2.60.40.10 143 225 1.4E-24 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20705 80e15fbd22da1054cc1600233651fe2e 225 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 141 8.2E-42 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS28030 041a4928117db2146aad508acc98be96 89 Gene3D G3DSA:1.10.1220.10 5 48 1.9E-15 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS28030 041a4928117db2146aad508acc98be96 89 SUPERFAMILY SSF47598 5 82 2.0E-22 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS28030 041a4928117db2146aad508acc98be96 89 Gene3D G3DSA:1.20.890.30 52 87 2.5E-13 T 28-03-2018 CI104_RS28030 041a4928117db2146aad508acc98be96 89 Pfam PF08681 Protein of unknown function (DUF1778) 8 86 2.7E-23 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 CI104_RS04565 fba6468898a40d0447948f6e8565fb2e 304 Gene3D G3DSA:3.90.245.10 1 303 8.8E-100 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS04565 fba6468898a40d0447948f6e8565fb2e 304 SUPERFAMILY SSF53590 3 300 1.01E-96 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS04565 fba6468898a40d0447948f6e8565fb2e 304 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 293 3.7E-83 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS04565 fba6468898a40d0447948f6e8565fb2e 304 Hamap MF_01432 Non-specific ribonucleoside hydrolase RihC [rihC]. 1 304 70.587 T 28-03-2018 IPR022976 Non-specific ribonucleoside hydrolase RihC GO:0016798 CI104_RS20345 5d54180398c84e42ceb1301bd969a71e 156 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 24 6.3E-6 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS20345 5d54180398c84e42ceb1301bd969a71e 156 SUPERFAMILY SSF54523 8 124 1.41E-6 T 28-03-2018 CI104_RS20345 5d54180398c84e42ceb1301bd969a71e 156 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS20345 5d54180398c84e42ceb1301bd969a71e 156 Gene3D G3DSA:3.30.700.10 7 141 5.4E-4 T 28-03-2018 CI104_RS20345 5d54180398c84e42ceb1301bd969a71e 156 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 26 2.8E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS26020 05094a2b2da2705e7982c23d86d48545 694 SUPERFAMILY SSF52540 351 655 3.79E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26020 05094a2b2da2705e7982c23d86d48545 694 SUPERFAMILY SSF52540 176 315 3.79E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26020 05094a2b2da2705e7982c23d86d48545 694 TIGRFAM TIGR03743 SXT_TraD: conjugative coupling factor TraD, SXT/TOL subfamily 13 651 1.4E-203 T 28-03-2018 IPR022458 Conjugative coupling factor TraG/TraD CI104_RS26020 05094a2b2da2705e7982c23d86d48545 694 Gene3D G3DSA:3.40.50.300 93 664 4.4E-24 T 28-03-2018 CI104_RS26020 05094a2b2da2705e7982c23d86d48545 694 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 406 622 2.6E-11 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CI104_RS26020 05094a2b2da2705e7982c23d86d48545 694 Pfam PF12846 AAA-like domain 199 249 2.6E-7 T 28-03-2018 CI104_RS14690 0b4b794e08d6dd931653a2b82f55e553 216 SUPERFAMILY SSF50814 31 216 1.9E-73 T 28-03-2018 IPR012674 Calycin CI104_RS14690 0b4b794e08d6dd931653a2b82f55e553 216 Pfam PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment 37 216 4.2E-80 T 28-03-2018 IPR015304 ZinT domain GO:0008270 CI104_RS14690 0b4b794e08d6dd931653a2b82f55e553 216 Gene3D G3DSA:2.40.128.20 29 216 6.9E-66 T 28-03-2018 IPR012674 Calycin CI104_RS04210 811bd1fbd9c8ed938043030c3c812a2e 187 Gene3D G3DSA:3.40.1740.10 101 179 1.6E-11 T 28-03-2018 CI104_RS04210 811bd1fbd9c8ed938043030c3c812a2e 187 Gene3D G3DSA:3.40.1740.10 1 95 7.3E-29 T 28-03-2018 CI104_RS04210 811bd1fbd9c8ed938043030c3c812a2e 187 Hamap MF_00758 UPF0301 protein YqgE [yqgE]. 1 187 39.502 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 CI104_RS04210 811bd1fbd9c8ed938043030c3c812a2e 187 Pfam PF02622 Uncharacterized ACR, COG1678 12 174 1.2E-47 T 28-03-2018 IPR003774 Protein of unknown function UPF0301 CI104_RS04210 811bd1fbd9c8ed938043030c3c812a2e 187 SUPERFAMILY SSF143456 1 187 2.88E-65 T 28-03-2018 CI104_RS10445 a284e9fdf2ede5c6947cc0ad81c01d64 251 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 170 247 1.8E-21 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CI104_RS10445 a284e9fdf2ede5c6947cc0ad81c01d64 251 SUPERFAMILY SSF117143 77 209 2.88E-17 T 28-03-2018 CI104_RS10445 a284e9fdf2ede5c6947cc0ad81c01d64 251 Pfam PF00460 Flagella basal body rod protein 5 35 2.1E-10 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CI104_RS10445 a284e9fdf2ede5c6947cc0ad81c01d64 251 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CI104_RS10445 a284e9fdf2ede5c6947cc0ad81c01d64 251 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 120 2.9E-32 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CI104_RS19390 fb9e05de672f2947350e13c728e50cff 182 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 14 174 3.0E-53 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CI104_RS19390 fb9e05de672f2947350e13c728e50cff 182 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 14 174 6.3E-54 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CI104_RS19340 0f66c6c36e34d11d31430d835b2e953f 273 Pfam PF06067 Domain of unknown function (DUF932) 36 261 2.0E-52 T 28-03-2018 IPR026325 Protein of unknown function DUF932 CI104_RS09110 ff8b38c52dcc6437437624e5d03c91d8 234 Pfam PF04288 MukE-like family 10 230 2.8E-125 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CI104_RS09110 ff8b38c52dcc6437437624e5d03c91d8 234 Hamap MF_01802 Chromosome partition protein MukE [mukE]. 10 234 48.477 T 28-03-2018 IPR007385 Prokaryotic chromosome segregation/condensation protein MukE GO:0005737|GO:0007059|GO:0030261 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 SUPERFAMILY SSF63882 7 177 8.24E-58 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Pfam PF03453 MoeA N-terminal region (domain I and II) 9 168 4.7E-47 T 28-03-2018 IPR005110 MoeA, N-terminal and linker domain GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 SUPERFAMILY SSF53218 178 321 1.13E-43 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 177 314 8.7E-35 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Gene3D G3DSA:2.170.190.11 66 142 3.8E-30 T 28-03-2018 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Gene3D G3DSA:2.40.340.10 330 402 2.9E-21 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Gene3D G3DSA:3.90.105.10 27 65 1.3E-11 T 28-03-2018 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 SUPERFAMILY SSF63867 328 407 1.44E-24 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Pfam PF03454 MoeA C-terminal region (domain IV) 332 404 1.0E-20 T 28-03-2018 IPR005111 MoeA, C-terminal, domain IV GO:0032324 KEGG: 00790+2.10.1.1|MetaCyc: PWY-6823|Reactome: R-HSA-947581 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 SMART SM00852 181 318 8.0E-44 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 ProSitePatterns PS01079 Molybdenum cofactor biosynthesis proteins signature 2. 254 287 - T 28-03-2018 IPR008284 Molybdenum cofactor biosynthesis, conserved site GO:0006777 Reactome: R-HSA-947581 CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Pfam PF00994 Probable molybdopterin binding domain 182 317 1.6E-27 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08565 957ef2727835e5b6ebbf73654911bc6d 411 Gene3D G3DSA:3.40.980.10 151 325 2.4E-53 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS10215 2ee162fa89e43a23a90f640e559b2ebd 312 Hamap MF_01666 Glyoxylate/hydroxypyruvate reductase A [ghrA]. 1 312 63.501 T 28-03-2018 IPR023514 Glyoxylate/hydroxypyruvate reductase A GO:0016618|GO:0030267|GO:0055114 KEGG: 00260+1.1.1.81|KEGG: 00620+1.1.1.79|KEGG: 00630+1.1.1.79+1.1.1.81|MetaCyc: PWY-1622 CI104_RS10215 2ee162fa89e43a23a90f640e559b2ebd 312 SUPERFAMILY SSF51735 98 278 1.39E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS10215 2ee162fa89e43a23a90f640e559b2ebd 312 Gene3D G3DSA:3.40.50.720 125 278 2.4E-33 T 28-03-2018 CI104_RS10215 2ee162fa89e43a23a90f640e559b2ebd 312 Gene3D G3DSA:3.40.50.720 1 124 2.8E-11 T 28-03-2018 CI104_RS10215 2ee162fa89e43a23a90f640e559b2ebd 312 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 105 277 2.6E-44 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CI104_RS10215 2ee162fa89e43a23a90f640e559b2ebd 312 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 216 232 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS10820 e493ae95c9a084d699c9afaac7fa3e22 821 Gene3D G3DSA:1.20.120.20 15 699 3.0E-8 T 28-03-2018 CI104_RS10820 e493ae95c9a084d699c9afaac7fa3e22 821 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 117 488 1.9E-20 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS10820 e493ae95c9a084d699c9afaac7fa3e22 821 Pfam PF10145 Phage-related minor tail protein 166 340 5.6E-14 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS14215 e993f7c086a466b6b6eb64395830d57a 179 Pfam PF04279 Intracellular septation protein A 1 175 5.7E-72 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CI104_RS14215 e993f7c086a466b6b6eb64395830d57a 179 Hamap MF_00189 Probable intracellular septation protein A [yciB]. 1 176 19.312 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CI104_RS14215 e993f7c086a466b6b6eb64395830d57a 179 TIGRFAM TIGR00997 ispZ: intracellular septation protein A 1 178 1.0E-73 T 28-03-2018 IPR006008 Intracellular septation protein A GO:0016021 CI104_RS00125 0258d3b4893ccf2a139f511094665ab6 445 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 5 445 8.9E-171 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS00125 0258d3b4893ccf2a139f511094665ab6 445 PIRSF PIRSF002746 2 445 9.1E-146 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS00125 0258d3b4893ccf2a139f511094665ab6 445 Pfam PF02447 GntP family permease 7 444 1.4E-162 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 Gene3D G3DSA:1.10.10.10 2 96 5.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 SMART SM00418 16 95 1.7E-25 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 SUPERFAMILY SSF46785 11 98 3.29E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 Pfam PF01022 Bacterial regulatory protein, arsR family 23 70 1.6E-16 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 18 33 1.7E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 66 81 1.7E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS19525 37cea7e490850906f8cc7b30aaea5bf1 99 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 51 66 1.7E-9 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS01985 1f66b0fa6135ccadc0a45edfb46222d6 128 SUPERFAMILY SSF75169 1 128 3.92E-38 T 28-03-2018 IPR027396 DsrEFH-like CI104_RS01985 1f66b0fa6135ccadc0a45edfb46222d6 128 TIGRFAM TIGR03012 sulf_tusD_dsrE: sulfur relay protein TusD/DsrE 2 128 3.5E-55 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CI104_RS01985 1f66b0fa6135ccadc0a45edfb46222d6 128 Gene3D G3DSA:3.40.1260.10 1 128 3.3E-31 T 28-03-2018 CI104_RS01985 1f66b0fa6135ccadc0a45edfb46222d6 128 Hamap MF_00390 Sulfurtransferase TusD [tusD]. 1 128 40.783 T 28-03-2018 IPR017463 Sulphur relay, TusD/DsrE GO:0005737|GO:0008033|GO:0016783 CI104_RS01985 1f66b0fa6135ccadc0a45edfb46222d6 128 Pfam PF02635 DsrE/DsrF-like family 1 128 6.9E-29 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 Gene3D G3DSA:3.40.30.10 1 84 3.2E-22 T 28-03-2018 CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 TIGRFAM TIGR02183 GRXA: glutaredoxin, GrxA family 2 86 8.4E-52 T 28-03-2018 IPR011902 Glutaredoxin, GrxA GO:0009055|GO:0015035|GO:0045454 CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 ProSitePatterns PS00195 Glutaredoxin active site. 5 20 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 SUPERFAMILY SSF52833 4 82 5.35E-21 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 PRINTS PR00160 Glutaredoxin signature 3 21 6.0E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 PRINTS PR00160 Glutaredoxin signature 66 79 6.0E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 PRINTS PR00160 Glutaredoxin signature 52 65 6.0E-12 T 28-03-2018 IPR014025 Glutaredoxin subgroup CI104_RS08685 35e9b08ab67d0b1df2f4cfde573f00d0 87 Pfam PF00462 Glutaredoxin 4 69 6.5E-17 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 Pfam PF00764 Arginosuccinate synthase 16 410 9.0E-57 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 ProSitePatterns PS00564 Argininosuccinate synthase signature 1. 17 25 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 SUPERFAMILY SSF52402 3 186 1.72E-34 T 28-03-2018 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 TIGRFAM TIGR00032 argG: argininosuccinate synthase 13 419 9.9E-169 T 28-03-2018 IPR001518 Argininosuccinate synthase GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 Hamap MF_00581 Argininosuccinate synthase [argG]. 1 443 76.836 T 28-03-2018 IPR023437 Argininosuccinate synthase, type 2 subfamily GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 SUPERFAMILY SSF69864 190 444 1.31E-80 T 28-03-2018 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 Gene3D G3DSA:3.90.1260.10 179 374 3.1E-55 T 28-03-2018 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body GO:0004055 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 ProSitePatterns PS00565 Argininosuccinate synthase signature 2. 129 140 - T 28-03-2018 IPR018223 Argininosuccinate synthase, conserved site GO:0004055|GO:0005524|GO:0006526 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 Gene3D G3DSA:3.40.50.620 2 178 6.9E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS02875 146497faf84d015cc8f2e3516f694a45 447 Gene3D G3DSA:1.10.287.400 378 437 7.1E-29 T 28-03-2018 IPR024073 Argininosuccinate synthetase mutimerisation domain, C-terminal tail GO:0042803 KEGG: 00220+6.3.4.5|KEGG: 00250+6.3.4.5|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400 CI104_RS11400 28dfcceec2421ecd9f6a7326508dfd84 861 Pfam PF13954 PapC N-terminal domain 42 179 2.7E-31 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS11400 28dfcceec2421ecd9f6a7326508dfd84 861 Pfam PF13953 PapC C-terminal domain 782 839 1.4E-12 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS11400 28dfcceec2421ecd9f6a7326508dfd84 861 SUPERFAMILY SSF141729 63 171 1.83E-23 T 28-03-2018 CI104_RS11400 28dfcceec2421ecd9f6a7326508dfd84 861 Pfam PF00577 Outer membrane usher protein 207 765 9.1E-141 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 Gene3D G3DSA:3.40.50.2300 63 182 4.6E-33 T 28-03-2018 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 Gene3D G3DSA:1.10.260.40 9 62 4.0E-20 T 28-03-2018 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 SMART SM00354 8 79 2.5E-23 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 SUPERFAMILY SSF53822 69 333 3.81E-66 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 SUPERFAMILY SSF47413 7 67 1.03E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 Pfam PF13377 Periplasmic binding protein-like domain 175 310 2.6E-33 T 28-03-2018 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 Pfam PF00356 Bacterial regulatory proteins, lacI family 13 56 1.4E-13 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS06885 ae4aa600e1a1f78afd91b03d3a056986 343 Gene3D G3DSA:3.40.50.2300 183 312 9.8E-43 T 28-03-2018 CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SUPERFAMILY SSF55785 25 134 8.9E-20 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SMART SM00091 12 78 2.3E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SMART SM00091 136 203 9.5E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SUPERFAMILY SSF141868 549 795 6.41E-84 T 28-03-2018 IPR001633 EAL domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 PIRSF PIRSF005925 4 135 1.6E-21 T 28-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 PIRSF PIRSF005925 311 798 7.2E-152 T 28-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 PIRSF PIRSF005925 125 316 9.7E-23 T 28-03-2018 IPR012226 Diguanylate cyclase/phosphodiesterase CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Gene3D G3DSA:3.30.450.20 17 134 4.5E-16 T 28-03-2018 CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Gene3D G3DSA:3.30.70.270 387 539 1.4E-35 T 28-03-2018 CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SMART SM00086 88 128 0.84 T 28-03-2018 IPR001610 PAC motif CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SMART SM00086 209 251 1.2E-5 T 28-03-2018 IPR001610 PAC motif CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Pfam PF00563 EAL domain 549 783 9.4E-69 T 28-03-2018 IPR001633 EAL domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Pfam PF00990 Diguanylate cyclase, GGDEF domain 378 527 1.1E-24 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Gene3D G3DSA:3.20.20.450 540 792 8.6E-95 T 28-03-2018 IPR001633 EAL domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Gene3D G3DSA:3.30.450.20 135 386 3.7E-23 T 28-03-2018 CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SMART SM00267 365 532 7.9E-38 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 18 133 3.8E-21 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 132 256 4.8E-16 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SUPERFAMILY SSF55785 127 249 9.77E-17 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Pfam PF13426 PAS domain 24 126 4.1E-11 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 Pfam PF13426 PAS domain 149 250 1.2E-13 T 28-03-2018 IPR000014 PAS domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SUPERFAMILY SSF55073 381 534 2.28E-28 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 373 528 1.1E-17 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13055 d9f0b71d945b43fe83cfebcfea77da27 801 SMART SM00052 542 788 3.2E-117 T 28-03-2018 IPR001633 EAL domain CI104_RS06580 106e3ddea2712ea73665946e8211804b 397 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 40 375 2.9E-83 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS06580 106e3ddea2712ea73665946e8211804b 397 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 64 293 3.1E-12 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS06580 106e3ddea2712ea73665946e8211804b 397 Gene3D G3DSA:1.20.1600.10 29 389 2.3E-35 T 28-03-2018 CI104_RS06580 106e3ddea2712ea73665946e8211804b 397 Pfam PF00529 HlyD membrane-fusion protein of T1SS 118 360 2.3E-9 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS06580 106e3ddea2712ea73665946e8211804b 397 SUPERFAMILY SSF111369 52 300 5.23E-89 T 28-03-2018 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 Gene3D G3DSA:3.40.50.2300 63 172 1.5E-27 T 28-03-2018 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 64 309 2.3E-31 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 SUPERFAMILY SSF53822 63 316 2.06E-61 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 SMART SM00354 5 75 2.0E-26 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 6.0E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 Gene3D G3DSA:3.40.50.2300 173 331 1.6E-36 T 28-03-2018 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 SUPERFAMILY SSF47413 5 62 5.63E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 CI104_RS01520 113cf7227b2b7b5c042fc3b251a62c77 331 Gene3D G3DSA:1.10.260.40 7 62 5.5E-14 T 28-03-2018 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 SUPERFAMILY SSF46785 4 110 7.37E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 Gene3D G3DSA:3.40.190.10 92 178 1.7E-34 T 28-03-2018 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 Pfam PF03466 LysR substrate binding domain 93 288 4.5E-12 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 TIGRFAM TIGR03298 argP: transcriptional regulator, ArgP family 5 293 1.4E-112 T 28-03-2018 IPR017685 HTH-type transcriptional regulator ArgP CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 1.1E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 Hamap MF_00513 HTH-type transcriptional regulator ArgP [argP]. 1 296 58.69 T 28-03-2018 IPR023490 HTH-type transcriptional regulator ArgP, Gammaproteobacteria CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 Gene3D G3DSA:1.10.10.10 2 83 1.0E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 5.5E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 SUPERFAMILY SSF53850 92 289 7.6E-19 T 28-03-2018 CI104_RS21130 09a6e3043d7a19e5ebc9059e2ea6c2f8 297 Gene3D G3DSA:3.40.190.10 179 262 1.5E-8 T 28-03-2018 CI104_RS07315 0cfaac219984b4308b592ea863be8fdf 334 Gene3D G3DSA:1.10.3470.10 5 334 1.3E-60 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS07315 0cfaac219984b4308b592ea863be8fdf 334 Pfam PF01032 FecCD transport family 19 328 1.6E-89 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS07315 0cfaac219984b4308b592ea863be8fdf 334 SUPERFAMILY SSF81345 8 329 2.35E-74 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 TIGRFAM TIGR03309 matur_yqeB: selenium-dependent molybdenum hydroxylase system protein, YqeB family 271 526 2.9E-122 T 28-03-2018 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 Pfam PF13478 XdhC Rossmann domain 106 247 7.5E-31 T 28-03-2018 IPR027051 XdhC Rossmann domain CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 SUPERFAMILY SSF51735 268 359 3.23E-5 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 Gene3D G3DSA:2.40.50.100 443 497 2.2E-4 T 28-03-2018 CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 Gene3D G3DSA:3.40.50.20 104 203 9.0E-6 T 28-03-2018 CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 Pfam PF02625 XdhC and CoxI family 12 73 3.4E-17 T 28-03-2018 IPR003777 XdhC- CoxI CI104_RS20930 41b474c5e818b53700e56cc16bce5677 541 Gene3D G3DSA:3.40.50.720 256 442 2.1E-5 T 28-03-2018 CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 Gene3D G3DSA:1.20.1050.10 144 201 2.3E-15 T 28-03-2018 CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 Gene3D G3DSA:1.20.1050.10 95 143 4.2E-13 T 28-03-2018 CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 Pfam PF02798 Glutathione S-transferase, N-terminal domain 4 81 1.8E-12 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 Pfam PF00043 Glutathione S-transferase, C-terminal domain 133 197 1.7E-11 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 Gene3D G3DSA:3.40.30.10 1 94 2.0E-24 T 28-03-2018 CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 SUPERFAMILY SSF47616 91 209 1.91E-34 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS17650 d4193d1ddc75438faadf7c39e3c6d7c1 215 SUPERFAMILY SSF52833 1 84 1.05E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS13200 9af8695ca893757d88037d7c09c65251 96 Pfam PF02426 Muconolactone delta-isomerase 1 90 2.6E-40 T 28-03-2018 IPR026029 Muconolactone isomerase domain KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CI104_RS13200 9af8695ca893757d88037d7c09c65251 96 TIGRFAM TIGR03221 muco_delta: muconolactone delta-isomerase 2 91 9.9E-45 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CI104_RS13200 9af8695ca893757d88037d7c09c65251 96 ProDom PD006619 ISOMERASE MUCONOLACTONE DELTA-ISOMERASE HYDROCARBONS MIASE AROMATIC CATABOLISM METHYLMUCONOLACTONE DIRECT SEQUENCING 1 57 7.0E-19 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CI104_RS13200 9af8695ca893757d88037d7c09c65251 96 SUPERFAMILY SSF54909 1 95 2.28E-37 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS13200 9af8695ca893757d88037d7c09c65251 96 PIRSF PIRSF001486 1 94 2.1E-47 T 28-03-2018 IPR003464 Muconolactone delta-isomerase GO:0006725 KEGG: 00362+5.3.3.4|MetaCyc: PWY-6185 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 PRINTS PR00070 Dihydrofolate reductase signature 17 27 4.6E-7 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 PRINTS PR00070 Dihydrofolate reductase signature 31 39 4.6E-7 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 PRINTS PR00070 Dihydrofolate reductase signature 45 56 4.6E-7 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 PRINTS PR00070 Dihydrofolate reductase signature 114 128 4.6E-7 T 28-03-2018 IPR012259 Dihydrofolate reductase GO:0004146|GO:0006545|GO:0009165|GO:0050661|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 SUPERFAMILY SSF53597 2 187 2.09E-34 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 ProSitePatterns PS00075 Dihydrofolate reductase (DHFR) domain signature. 17 39 - T 28-03-2018 IPR017925 Dihydrofolate reductase conserved site GO:0004146|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-1474151|Reactome: R-HSA-196757|Reactome: R-HSA-539107 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 Pfam PF00186 Dihydrofolate reductase 6 186 1.1E-26 T 28-03-2018 IPR001796 Dihydrofolate reductase domain GO:0004146|GO:0006545|GO:0009165|GO:0055114 KEGG: 00670+1.5.1.3|KEGG: 00790+1.5.1.3|MetaCyc: PWY-3841|MetaCyc: PWY-6614|Reactome: R-HSA-196757 CI104_RS25730 07e26b392c0d6755220a22c73ff649ab 189 Gene3D G3DSA:3.40.430.10 1 189 3.8E-33 T 28-03-2018 IPR024072 Dihydrofolate reductase-like domain Reactome: R-HSA-196757 CI104_RS07330 c692f0eaa2e8e64a4af48e6448712a26 391 Gene3D G3DSA:3.60.120.10 1 391 2.4E-102 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS07330 c692f0eaa2e8e64a4af48e6448712a26 391 SUPERFAMILY SSF56322 14 389 1.96E-88 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS07330 c692f0eaa2e8e64a4af48e6448712a26 391 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 113 387 1.7E-82 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CI104_RS07330 c692f0eaa2e8e64a4af48e6448712a26 391 Pfam PF00425 chorismate binding enzyme 126 380 1.6E-67 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CI104_RS09945 ea045775bc4e081817b2e41acedb162b 233 SUPERFAMILY SSF51569 6 226 1.47E-52 T 28-03-2018 CI104_RS09945 ea045775bc4e081817b2e41acedb162b 233 PIRSF PIRSF001357 3 227 3.0E-61 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS09945 ea045775bc4e081817b2e41acedb162b 233 Gene3D G3DSA:3.20.20.70 5 228 6.8E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS09945 ea045775bc4e081817b2e41acedb162b 233 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 10 221 2.7E-46 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS09945 ea045775bc4e081817b2e41acedb162b 233 Pfam PF01791 DeoC/LacD family aldolase 54 205 2.3E-7 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS09945 ea045775bc4e081817b2e41acedb162b 233 SMART SM01133 9 225 9.3E-51 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 Gene3D G3DSA:3.20.20.150 1 285 1.9E-62 T 28-03-2018 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 SMART SM00518 3 279 5.1E-140 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 Pfam PF01261 Xylose isomerase-like TIM barrel 21 239 1.8E-41 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 ProSitePatterns PS00730 AP endonucleases family 2 signature 2. 175 182 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 TIGRFAM TIGR00587 nfo: apurinic endonuclease (APN1) 2 276 2.0E-115 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 SUPERFAMILY SSF51658 1 277 2.36E-102 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 ProSitePatterns PS00729 AP endonucleases family 2 signature 1. 69 77 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 ProSitePatterns PS00731 AP endonucleases family 2 signature 3. 215 231 - T 28-03-2018 IPR018246 AP endonuclease 2, zinc binding site GO:0008270 CI104_RS16930 ca55a37c5683e8351a61b9485e78ae9f 285 Hamap MF_00152 Probable endonuclease 4 [nfo]. 2 279 44.823 T 28-03-2018 IPR001719 AP endonuclease 2 GO:0003677|GO:0006281|GO:0008270 CI104_RS13595 0578c119946445247ef9993b86577e73 175 Pfam PF01292 Prokaryotic cytochrome b561 5 172 4.6E-20 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CI104_RS13595 0578c119946445247ef9993b86577e73 175 Gene3D G3DSA:1.20.950.20 2 175 1.3E-24 T 28-03-2018 CI104_RS13595 0578c119946445247ef9993b86577e73 175 SUPERFAMILY SSF81342 4 172 2.75E-26 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS19925 559ec4c0316f401f54e3ee03081bdd1d 375 SUPERFAMILY SSF51261 118 372 4.87E-53 T 28-03-2018 IPR011055 Duplicated hybrid motif CI104_RS19925 559ec4c0316f401f54e3ee03081bdd1d 375 Gene3D G3DSA:2.70.70.10 236 374 4.4E-38 T 28-03-2018 CI104_RS19925 559ec4c0316f401f54e3ee03081bdd1d 375 Pfam PF01551 Peptidase family M23 275 368 1.2E-31 T 28-03-2018 IPR016047 Peptidase M23 CI104_RS19925 559ec4c0316f401f54e3ee03081bdd1d 375 Pfam PF01476 LysM domain 119 161 3.3E-11 T 28-03-2018 IPR018392 LysM domain CI104_RS19925 559ec4c0316f401f54e3ee03081bdd1d 375 Gene3D G3DSA:3.10.350.10 107 207 2.3E-12 T 28-03-2018 CI104_RS19925 559ec4c0316f401f54e3ee03081bdd1d 375 SMART SM00257 118 162 1.7E-10 T 28-03-2018 IPR018392 LysM domain CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 Pfam PF02687 FtsX-like permease family 553 641 2.0E-10 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 Pfam PF12704 MacB-like periplasmic core domain 272 491 1.1E-41 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 SMART SM00382 33 220 7.4E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 Pfam PF00005 ABC transporter 24 172 9.0E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 Gene3D G3DSA:3.40.50.300 1 271 2.4E-68 T 28-03-2018 CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08840 8e3d18b7ecd8d0cb7fe540607c45ffd0 648 SUPERFAMILY SSF52540 4 230 5.19E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 Gene3D G3DSA:1.10.3130.10 2 135 3.7E-39 T 28-03-2018 CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 SMART SM00971 9 113 4.7E-65 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 Gene3D G3DSA:2.160.10.10 136 268 3.9E-30 T 28-03-2018 CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 SUPERFAMILY SSF51161 4 260 1.94E-68 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 PIRSF PIRSF000441 75 266 3.2E-61 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 TIGRFAM TIGR01172 cysE: serine O-acetyltransferase 82 242 1.4E-75 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 193 226 6.2E-10 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 Pfam PF06426 Serine acetyltransferase, N-terminal 9 113 1.2E-39 T 28-03-2018 IPR010493 Serine acetyltransferase, N-terminal GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CI104_RS00670 ad5560e9de2b2a88053c62e9ea17b253 273 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 202 230 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 TIGRFAM TIGR01515 branching_enzym: 1,4-alpha-glucan branching enzyme 109 723 0.0 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 SMART SM00642 247 596 2.0E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Gene3D G3DSA:2.60.40.10 112 223 2.4E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Gene3D G3DSA:2.60.40.1180 623 726 3.7E-35 T 28-03-2018 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Hamap MF_00685 1,4-alpha-glucan branching enzyme GlgB [glgB]. 101 726 43.638 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 SUPERFAMILY SSF81296 117 223 8.4E-36 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Gene3D G3DSA:2.60.40.10 1 104 8.2E-11 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 SUPERFAMILY SSF81296 16 115 1.54E-18 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Pfam PF00128 Alpha amylase, catalytic domain 273 348 7.0E-10 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 SUPERFAMILY SSF51011 624 726 6.48E-36 T 28-03-2018 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 125 207 7.1E-26 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Gene3D G3DSA:3.20.20.80 230 612 1.2E-71 T 28-03-2018 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 PIRSF PIRSF000463 6 728 1.7E-287 T 28-03-2018 IPR006407 1,4-alpha-glucan-branching enzyme, GlgB GO:0003844|GO:0005978 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622|Reactome: R-HSA-3322077 CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 SUPERFAMILY SSF51445 230 621 8.16E-112 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS01545 5152d2e3d73400228062b3d217d73c6b 728 Pfam PF02806 Alpha amylase, C-terminal all-beta domain 628 725 6.8E-25 T 28-03-2018 IPR006048 Alpha-amylase/branching enzyme, C-terminal all beta GO:0003824|GO:0005975|GO:0043169 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS02340 507733c64eb92fbe9e31d372cd46b0a2 54 ProDom PD052549 YHDU TRANSMEMBRANE MEMBRANE PERIPLASMIC 1 54 2.0E-22 T 28-03-2018 IPR022540 Protein of unknown function DUF2556 CI104_RS02340 507733c64eb92fbe9e31d372cd46b0a2 54 Pfam PF10831 Protein of unknown function (DUF2556) 1 53 1.5E-38 T 28-03-2018 IPR022540 Protein of unknown function DUF2556 CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 16 134 1.4E-37 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 92 109 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 SUPERFAMILY SSF49354 16 134 9.68E-38 T 28-03-2018 IPR008962 PapD-like CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 Gene3D G3DSA:2.60.40.10 138 229 1.3E-25 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 SUPERFAMILY SSF49584 142 229 2.35E-22 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 159 217 2.0E-15 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 Gene3D G3DSA:2.60.40.10 16 135 2.8E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 PRINTS PR00969 Pili chaperone signature 93 110 3.5E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 PRINTS PR00969 Pili chaperone signature 63 84 3.5E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 PRINTS PR00969 Pili chaperone signature 153 168 3.5E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 PRINTS PR00969 Pili chaperone signature 116 131 3.5E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22900 a2bf4b8236898a1d315e26decb07eebe 237 PRINTS PR00969 Pili chaperone signature 17 26 3.5E-33 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 ProSitePatterns PS00665 Dihydrodipicolinate synthase signature 1. 41 58 - T 28-03-2018 IPR020624 Schiff base-forming aldolase, conserved site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 SMART SM01130 4 293 2.8E-89 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 137 167 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 Pfam PF00701 Dihydrodipicolinate synthetase family 5 291 4.1E-107 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 SUPERFAMILY SSF51569 5 291 4.61E-84 T 28-03-2018 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 TIGRFAM TIGR00683 nanA: N-acetylneuraminate lyase 5 296 6.8E-160 T 28-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 Gene3D G3DSA:3.20.20.70 3 297 5.7E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 PIRSF PIRSF001365 1 297 1.7E-84 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 Hamap MF_01237 N-acetylneuraminate lyase [nanA]. 5 294 50.933 T 28-03-2018 IPR005264 N-acetylneuraminate lyase GO:0005737|GO:0005975|GO:0008747 KEGG: 00520+4.1.3.3|MetaCyc: PWY-7581|Reactome: R-HSA-4085001 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 7.0E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 7.0E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 38 59 7.0E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS02600 5bd786003a13bf906192bb1860f2978f 297 PRINTS PR00146 Dihydrodipicolinate synthase signature 132 149 7.0E-21 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS23015 8ef08f51e023c66a118d614a5cc7474f 547 SUPERFAMILY SSF53649 239 531 1.22E-18 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS23015 8ef08f51e023c66a118d614a5cc7474f 547 Gene3D G3DSA:3.40.720.10 241 542 1.7E-21 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS23015 8ef08f51e023c66a118d614a5cc7474f 547 Pfam PF00884 Sulfatase 238 527 6.1E-54 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS23015 8ef08f51e023c66a118d614a5cc7474f 547 Pfam PF08019 Domain of unknown function (DUF1705) 59 209 1.8E-41 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CI104_RS10645 ae952cede5450672b9923bfddf4cc82b 229 PIRSF PIRSF028111 2 229 2.1E-77 T 28-03-2018 IPR016868 Bacteriophage B3, Orf5 CI104_RS10645 ae952cede5450672b9923bfddf4cc82b 229 Pfam PF10979 Protein of unknown function (DUF2786) 7 45 1.2E-13 T 28-03-2018 IPR024498 Domain of unknown function DUF2786 CI104_RS01990 d160bb70f24fc20c72240799f0ee8d85 119 SUPERFAMILY SSF75169 1 119 1.38E-32 T 28-03-2018 IPR027396 DsrEFH-like CI104_RS01990 d160bb70f24fc20c72240799f0ee8d85 119 TIGRFAM TIGR03010 sulf_tusC_dsrF: sulfur relay protein TusC/DsrF 3 119 5.7E-43 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF CI104_RS01990 d160bb70f24fc20c72240799f0ee8d85 119 Hamap MF_00389 Protein TusC [tusC]. 1 119 34.315 T 28-03-2018 IPR017462 Sulphur relay, TusC/DsrF CI104_RS01990 d160bb70f24fc20c72240799f0ee8d85 119 Gene3D G3DSA:3.40.1260.10 4 117 6.4E-17 T 28-03-2018 CI104_RS01990 d160bb70f24fc20c72240799f0ee8d85 119 Pfam PF02635 DsrE/DsrF-like family 2 119 2.0E-20 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CI104_RS16840 b1809da7959df1d113a1aedb6ed2b892 231 Pfam PF04172 LrgB-like family 12 224 8.0E-79 T 28-03-2018 IPR007300 CidB/LrgB family CI104_RS16840 b1809da7959df1d113a1aedb6ed2b892 231 TIGRFAM TIGR00659 TIGR00659: TIGR00659 family protein 2 226 1.2E-108 T 28-03-2018 IPR005261 Conserved hypothetical protein CHP00659 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Gene3D G3DSA:1.10.1060.10 2 144 3.7E-40 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 PRINTS PR00419 Adrenodoxin reductase family signature 324 337 3.0E-38 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 PRINTS PR00419 Adrenodoxin reductase family signature 148 170 3.0E-38 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 PRINTS PR00419 Adrenodoxin reductase family signature 171 184 3.0E-38 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 PRINTS PR00419 Adrenodoxin reductase family signature 290 304 3.0E-38 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 PRINTS PR00419 Adrenodoxin reductase family signature 213 223 3.0E-38 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 SUPERFAMILY SSF51971 145 401 6.47E-69 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 25 134 9.2E-38 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 6 472 1.1E-267 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Gene3D G3DSA:3.50.50.60 243 314 2.8E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Gene3D G3DSA:3.50.50.60 315 401 1.1E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 SUPERFAMILY SSF46548 7 157 6.8E-41 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Gene3D G3DSA:3.50.50.60 402 472 4.1E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Gene3D G3DSA:3.40.50.20 145 242 3.2E-17 T 28-03-2018 CI104_RS02630 50f96b3ce10566b6cc6f5809e63611fb 472 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 147 459 7.5E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 3.3E-32 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 1.6E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 1.6E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 1.6E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 SUPERFAMILY SSF47729 1 90 1.62E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 Gene3D G3DSA:4.10.520.10 1 90 1.0E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS06435 c7f3973e254898425cc5b3b1c8cf5a11 90 SMART SM00411 1 90 3.8E-42 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 74 96 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 174 192 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 298 315 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 260 279 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 28 51 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 216 237 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 238 259 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 113 138 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 53 73 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 194 215 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 280 298 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 6 26 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 PRINTS PR01002 Flagellar protein FlgJ signature 150 173 1.2E-174 T 28-03-2018 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 165 298 1.2E-19 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 SMART SM00047 145 309 1.3E-66 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 TIGRFAM TIGR02541 flagell_FlgJ: flagellar rod assembly protein/muramidase FlgJ 12 298 1.3E-124 T 28-03-2018 IPR013377 Peptidoglycan hydrolase FlgJ GO:0016798|GO:0044780 CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 Pfam PF10135 Rod binding protein 50 97 1.1E-16 T 28-03-2018 IPR019301 Flagellar protein FlgJ, N-terminal CI104_RS10465 f28d7f1fde0134f8e3d2bf6215c9f95f 316 Gene3D G3DSA:1.10.530.10 148 302 1.3E-33 T 28-03-2018 CI104_RS00905 7314657c755a7aff628f4bb09cd75f64 312 Gene3D G3DSA:3.40.1190.20 5 312 7.1E-64 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS00905 7314657c755a7aff628f4bb09cd75f64 312 Pfam PF00294 pfkB family carbohydrate kinase 6 306 2.4E-62 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS00905 7314657c755a7aff628f4bb09cd75f64 312 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 258 271 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS00905 7314657c755a7aff628f4bb09cd75f64 312 SUPERFAMILY SSF53613 4 310 1.87E-82 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS05360 db457cbff8e7309affb17c50e4d7616c 382 Gene3D G3DSA:3.40.50.2000 185 367 1.5E-14 T 28-03-2018 CI104_RS05360 db457cbff8e7309affb17c50e4d7616c 382 Pfam PF02684 Lipid-A-disaccharide synthetase 9 377 5.9E-156 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS05360 db457cbff8e7309affb17c50e4d7616c 382 TIGRFAM TIGR00215 lpxB: lipid-A-disaccharide synthase 1 380 7.2E-189 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS05360 db457cbff8e7309affb17c50e4d7616c 382 Gene3D G3DSA:3.40.50.2000 1 184 8.1E-5 T 28-03-2018 CI104_RS05360 db457cbff8e7309affb17c50e4d7616c 382 SUPERFAMILY SSF53756 9 376 1.22E-28 T 28-03-2018 CI104_RS05360 db457cbff8e7309affb17c50e4d7616c 382 Hamap MF_00392 Lipid-A-disaccharide synthase [lpxB]. 6 382 43.556 T 28-03-2018 IPR003835 Glycosyl transferase, family 19 GO:0008915|GO:0009245 KEGG: 00500+2.4.1.18|KEGG: 00540+2.4.1.182|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS13940 73bbbb10f6f38aa4e8cefa31caf6e7a2 351 SUPERFAMILY SSF55347 138 281 1.96E-23 T 28-03-2018 CI104_RS13940 73bbbb10f6f38aa4e8cefa31caf6e7a2 351 Gene3D G3DSA:3.40.50.720 2 141 1.1E-36 T 28-03-2018 CI104_RS13940 73bbbb10f6f38aa4e8cefa31caf6e7a2 351 Gene3D G3DSA:3.30.360.10 142 351 1.2E-29 T 28-03-2018 CI104_RS13940 73bbbb10f6f38aa4e8cefa31caf6e7a2 351 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 142 247 9.8E-10 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS13940 73bbbb10f6f38aa4e8cefa31caf6e7a2 351 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 10 128 9.0E-31 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS13940 73bbbb10f6f38aa4e8cefa31caf6e7a2 351 SUPERFAMILY SSF51735 8 159 3.27E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04990 ce9e519df651accf0ab7cc78f2c95d48 187 Gene3D G3DSA:3.40.80.10 1 187 3.4E-55 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS04990 ce9e519df651accf0ab7cc78f2c95d48 187 SMART SM00644 16 166 1.9E-59 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS04990 ce9e519df651accf0ab7cc78f2c95d48 187 SUPERFAMILY SSF55846 2 180 8.24E-69 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS04990 ce9e519df651accf0ab7cc78f2c95d48 187 Pfam PF01510 N-acetylmuramoyl-L-alanine amidase 51 167 4.6E-26 T 28-03-2018 IPR002502 N-acetylmuramoyl-L-alanine amidase domain GO:0008745|GO:0009253 Reactome: R-HSA-6803157 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PIRSF PIRSF001369 15 389 5.0E-111 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 Pfam PF00285 Citrate synthase, C-terminal domain 22 370 2.3E-115 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PRINTS PR00143 Citrate synthase signature 139 152 1.6E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PRINTS PR00143 Citrate synthase signature 211 239 1.6E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PRINTS PR00143 Citrate synthase signature 264 284 1.6E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PRINTS PR00143 Citrate synthase signature 341 355 1.6E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PRINTS PR00143 Citrate synthase signature 321 337 1.6E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 PRINTS PR00143 Citrate synthase signature 189 204 1.6E-37 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 SUPERFAMILY SSF48256 22 382 1.1E-123 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 Gene3D G3DSA:1.10.580.10 28 368 5.0E-83 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 ProSitePatterns PS00480 Citrate synthase signature. 271 283 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CI104_RS05895 996aba53743c5fce024ec5e3d05b529b 389 TIGRFAM TIGR01800 cit_synth_II: 2-methylcitrate synthase/citrate synthase II 21 388 4.0E-167 T 28-03-2018 IPR011278 2-methylcitrate synthase/citrate synthase type I GO:0005737|GO:0046912 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 Pfam PF05681 Fumarate hydratase (Fumerase) 51 326 9.9E-86 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 TIGRFAM TIGR00722 ttdA_fumA_fumB: hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type 76 325 1.7E-30 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 Gene3D G3DSA:3.20.130.10 359 536 2.3E-68 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 SUPERFAMILY SSF117457 361 536 1.44E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 ProSitePatterns PS00163 Fumarate lyases signature. 456 465 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 PIRSF PIRSF001394 30 548 3.3E-237 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 Pfam PF05683 Fumarase C-terminus 332 537 9.9E-95 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS12575 c45d0c18f8f06f33449b6eff7edd28d0 548 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 537 1.9E-62 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS03790 2cd8601219eabfb6a46be6f7498342f1 118 Pfam PF04380 Membrane fusogenic activity 21 98 9.6E-29 T 28-03-2018 IPR007475 Membrane fusogenic activity CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 Pfam PF08206 Ribonuclease B OB domain 24 80 1.3E-19 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 SUPERFAMILY SSF50249 83 171 4.2E-32 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 6 641 3.0E-244 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 TIGRFAM TIGR02062 RNase_B: exoribonuclease II 1 642 0.0 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 SUPERFAMILY SSF50249 8 80 1.21E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 ProSitePatterns PS01175 Ribonuclease II family signature. 484 508 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 SUPERFAMILY SSF50249 560 642 1.31E-19 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 Hamap MF_01036 Exoribonuclease 2 [rnb]. 1 643 45.18 T 28-03-2018 IPR011804 Ribonuclease II GO:0003723|GO:0006401|GO:0008859 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 SMART SM00357 23 79 1.0E-13 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 Pfam PF00773 RNB domain 189 516 7.6E-83 T 28-03-2018 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 Pfam PF00575 S1 RNA binding domain 559 636 1.4E-9 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 Gene3D G3DSA:2.40.50.140 558 644 1.5E-7 T 28-03-2018 CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 SUPERFAMILY SSF50249 176 556 1.23E-113 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS14035 5df63f375967d946e40cfaba4650a4d9 644 SMART SM00955 189 517 9.3E-126 T 28-03-2018 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 SUPERFAMILY SSF51445 3 471 9.53E-160 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 Pfam PF00232 Glycosyl hydrolase family 1 3 470 2.0E-132 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 410 427 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 389 400 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 368 376 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 302 316 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 PRINTS PR00131 Glycosyl hydrolase family 1 signature 435 447 1.1E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 Gene3D G3DSA:3.20.20.80 1 474 5.2E-154 T 28-03-2018 CI104_RS19785 8d342b4af7b48633a83b775d7f2fab8c 474 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 368 376 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 SUPERFAMILY SSF53067 88 394 9.72E-54 T 28-03-2018 CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 Gene3D G3DSA:1.10.10.10 13 72 1.8E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 Pfam PF00480 ROK family 89 392 1.4E-99 T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 SUPERFAMILY SSF46785 14 79 2.31E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 Gene3D G3DSA:3.30.420.40 210 402 7.4E-47 T 28-03-2018 CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 Pfam PF01047 MarR family 25 63 1.0E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 ProSitePatterns PS01125 ROK family signature. 220 247 - T 28-03-2018 IPR000600 ROK family Reactome: R-HSA-4085001 CI104_RS07685 7820155853eb9e5eeaad293e50aa566a 406 Gene3D G3DSA:3.30.420.40 73 209 2.4E-19 T 28-03-2018 CI104_RS26570 c8ba5a436a88277ccc079cb1096ee22e 102 Gene3D G3DSA:2.10.230.10 1 75 1.4E-4 T 28-03-2018 CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 Pfam PF00501 AMP-binding enzyme 29 460 5.8E-112 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 Gene3D G3DSA:3.30.300.30 455 560 8.3E-28 T 28-03-2018 CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 Pfam PF13193 AMP-binding enzyme C-terminal domain 469 543 2.7E-17 T 28-03-2018 IPR025110 AMP-binding enzyme, C-terminal domain CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 ProSitePatterns PS00455 Putative AMP-binding domain signature. 211 222 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 Gene3D G3DSA:2.30.38.10 372 453 1.1E-28 T 28-03-2018 CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 Gene3D G3DSA:3.40.50.980 20 216 2.1E-42 T 28-03-2018 CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 SUPERFAMILY SSF56801 15 555 6.8E-153 T 28-03-2018 CI104_RS15065 4941f2045bb3b4b7847e4da81fb4879a 561 Gene3D G3DSA:3.40.50.980 217 371 2.0E-38 T 28-03-2018 CI104_RS20335 8f9c384475489883348d88fbfeec970c 135 Pfam PF10713 Protein of unknown function (DUF2509) 15 132 9.7E-29 T 28-03-2018 IPR019652 Protein of unknown function DUF2509 CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 Gene3D G3DSA:3.20.20.80 184 647 1.9E-75 T 28-03-2018 CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 SMART SM00642 193 637 4.2E-81 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 Pfam PF00128 Alpha amylase, catalytic domain 226 375 4.1E-27 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 Pfam PF00128 Alpha amylase, catalytic domain 441 595 8.5E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 PIRSF PIRSF036917 1 676 0.0 T 28-03-2018 IPR014635 Alpha-amylase, MalS type GO:0004556|GO:0005509|GO:0030980|GO:0042597|GO:0051692 KEGG: 00500+3.2.1.1 CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 SUPERFAMILY SSF51445 374 643 1.95E-73 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 SUPERFAMILY SSF51445 178 318 1.95E-73 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS00800 af3257d7dd22e97439bb024c8bc8042c 676 Gene3D G3DSA:2.60.40.1180 122 171 0.09 T 28-03-2018 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 Gene3D G3DSA:1.10.10.10 15 34 0.18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 SUPERFAMILY SSF47413 20 79 1.62E-10 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 Gene3D G3DSA:1.10.260.40 35 75 4.2E-15 T 28-03-2018 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 Gene3D G3DSA:3.40.50.2300 76 192 5.0E-22 T 28-03-2018 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 SUPERFAMILY SSF53822 78 339 4.5E-41 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 Pfam PF00356 Bacterial regulatory proteins, lacI family 22 65 3.5E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 SMART SM00354 20 91 2.4E-11 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 Pfam PF13377 Periplasmic binding protein-like domain 187 357 7.8E-22 T 28-03-2018 CI104_RS03325 1c4b8e35cf2fc7522c1aafe5440393b2 358 Gene3D G3DSA:3.40.50.2300 193 341 6.9E-32 T 28-03-2018 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 Hamap MF_01358 NAD(P)H-quinone oxidoreductase subunit H, chloroplastic [ndhH]. 211 600 41.799 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 TIGRFAM TIGR01962 NuoD: NADH dehydrogenase (quinone), D subunit 215 600 3.1E-177 T 28-03-2018 IPR022885 NAD(P)H-quinone oxidoreductase subunit D/H GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 Hamap MF_01359 NADH-quinone oxidoreductase subunit C/D [nuoC]. 16 600 71.957 T 28-03-2018 IPR023062 NADH dehydrogenase, subunit CD GO:0030964|GO:0050136|GO:0055114 KEGG: 00190+1.6.5.11 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 TIGRFAM TIGR01961 NuoC_fam: NADH (or F420H2) dehydrogenase, subunit C 49 176 1.4E-42 T 28-03-2018 IPR010218 NADH dehydrogenase, subunit C GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 SUPERFAMILY SSF143243 25 229 1.44E-57 T 28-03-2018 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 329 600 6.4E-102 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 Gene3D G3DSA:1.10.645.10 411 596 1.1E-31 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 252 263 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 50 177 1.4E-38 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 Gene3D G3DSA:1.10.645.10 211 410 8.1E-47 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 105 160 7.0E-26 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17540 de2a5e9dad3c0e9cebc499517c19d814 600 SUPERFAMILY SSF56762 225 600 1.44E-119 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS02295 b4be51378ff1e401bab2f866c43cd515 367 SUPERFAMILY SSF161098 154 346 1.44E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS02295 b4be51378ff1e401bab2f866c43cd515 367 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 174 360 7.3E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS02295 b4be51378ff1e401bab2f866c43cd515 367 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 156 252 6.3E-20 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS02295 b4be51378ff1e401bab2f866c43cd515 367 Gene3D G3DSA:1.10.3720.10 29 365 3.9E-33 T 28-03-2018 CI104_RS24690 0d607458e9611ffd493074e975a41821 89 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 3 48 8.4E-21 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CI104_RS24690 0d607458e9611ffd493074e975a41821 89 Pfam PF02416 mttA/Hcf106 family 4 55 1.8E-15 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CI104_RS24690 0d607458e9611ffd493074e975a41821 89 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 82 24.809 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CI104_RS16465 48f77d254fb28654cb8d25ad49940457 467 TIGRFAM TIGR04004 WcaM: colanic acid biosynthesis protein WcaM 3 464 1.6E-293 T 28-03-2018 IPR023882 Colanic acid biosynthesis WcaM CI104_RS16465 48f77d254fb28654cb8d25ad49940457 467 Gene3D G3DSA:2.160.20.10 23 284 2.0E-14 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS16465 48f77d254fb28654cb8d25ad49940457 467 SUPERFAMILY SSF51126 47 353 3.33E-20 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS16465 48f77d254fb28654cb8d25ad49940457 467 Gene3D G3DSA:2.160.20.10 285 380 8.9E-5 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 TIGRFAM TIGR01853 lipid_A_lpxD: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD 8 329 2.6E-130 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 SUPERFAMILY SSF51161 32 316 2.5E-87 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Gene3D G3DSA:2.160.10.10 191 341 8.1E-24 T 28-03-2018 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Pfam PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD 22 88 7.9E-22 T 28-03-2018 IPR020573 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region GO:0009245|GO:0016747 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Gene3D G3DSA:2.160.10.10 23 137 5.9E-20 T 28-03-2018 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 225 253 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Gene3D G3DSA:2.160.10.10 138 190 1.1E-12 T 28-03-2018 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 5.4E-10 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 222 255 3.6E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 145 179 1.1E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Hamap MF_00523 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase [lpxD]. 9 326 35.768 T 28-03-2018 IPR007691 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase LpxD GO:0009245|GO:0016410 CI104_RS05345 c97bc2c0a97e1dc0bd20e1c759c77289 341 Pfam PF14602 Hexapeptide repeat of succinyl-transferase 259 285 0.23 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 Gene3D G3DSA:3.50.50.60 4 363 2.3E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 294 307 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 SUPERFAMILY SSF51905 6 178 7.59E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 SUPERFAMILY SSF51905 267 383 7.59E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 Pfam PF01494 FAD binding domain 6 339 9.1E-28 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 7 390 2.2E-130 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 295 311 1.9E-18 T 28-03-2018 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.9E-18 T 28-03-2018 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 280 295 1.9E-18 T 28-03-2018 CI104_RS07630 d88653dfc9888fd1021509ae2f326210 391 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 157 172 1.9E-18 T 28-03-2018 CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 Gene3D G3DSA:3.90.650.10 164 347 2.5E-42 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 Hamap MF_00625 Selenide, water dikinase [selD]. 5 347 45.473 T 28-03-2018 IPR023061 Selenophosphate synthetase, class I GO:0004756|GO:0005524|GO:0016260 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 PIRSF PIRSF036407 1 346 1.7E-117 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 Gene3D G3DSA:3.30.1330.10 1 162 4.7E-38 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 SUPERFAMILY SSF56042 164 340 2.84E-50 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 Pfam PF02769 AIR synthase related protein, C-terminal domain 169 344 6.3E-31 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 SUPERFAMILY SSF55326 7 161 1.15E-41 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 TIGRFAM TIGR00476 selD: selenide, water dikinase 7 313 9.2E-135 T 28-03-2018 IPR004536 Selenophosphate synthetase GO:0005524 KEGG: 00450+2.7.9.3|MetaCyc: PWY-6281 CI104_RS11715 66f9e7c2856391010b3f0c917462a7c2 347 Pfam PF00586 AIR synthase related protein, N-terminal domain 50 157 6.6E-19 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS27575 5c474cb8b0bbd81ddf13afa768f26b14 401 SMART SM00304 53 105 1.4E-4 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS27575 5c474cb8b0bbd81ddf13afa768f26b14 401 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 169 320 8.4E-45 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS27575 5c474cb8b0bbd81ddf13afa768f26b14 401 Gene3D G3DSA:1.10.287.950 12 160 1.6E-18 T 28-03-2018 CI104_RS27575 5c474cb8b0bbd81ddf13afa768f26b14 401 Gene3D G3DSA:1.10.287.950 161 357 8.4E-45 T 28-03-2018 CI104_RS27575 5c474cb8b0bbd81ddf13afa768f26b14 401 SUPERFAMILY SSF58104 73 355 4.97E-67 T 28-03-2018 CI104_RS27575 5c474cb8b0bbd81ddf13afa768f26b14 401 SMART SM00283 106 353 2.1E-76 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS08225 e19cbbdbb1df5075d2b8302b3a4cd2ab 331 Gene3D G3DSA:2.130.10.10 2 331 6.0E-56 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS08225 e19cbbdbb1df5075d2b8302b3a4cd2ab 331 Hamap MF_01605 6-phosphogluconolactonase [pgl]. 1 331 55.943 T 28-03-2018 IPR022528 6-phosphogluconolactonase, YbhE-type GO:0005975|GO:0006098|GO:0017057 KEGG: 00030+3.1.1.31 CI104_RS08225 e19cbbdbb1df5075d2b8302b3a4cd2ab 331 Pfam PF10282 Lactonase, 7-bladed beta-propeller 6 327 4.3E-88 T 28-03-2018 IPR019405 Lactonase, 7-bladed beta propeller CI104_RS08225 e19cbbdbb1df5075d2b8302b3a4cd2ab 331 SUPERFAMILY SSF50974 69 330 1.57E-52 T 28-03-2018 IPR011045 Nitrous oxide reductase, N-terminal Reactome: R-HSA-114608 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 Gene3D G3DSA:2.30.40.10 1 62 2.5E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 TIGRFAM TIGR02033 D-hydantoinase: dihydropyrimidinase 3 453 2.2E-191 T 28-03-2018 IPR011778 Hydantoinase/dihydropyrimidinase GO:0005737 Reactome: R-HSA-399956 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 SUPERFAMILY SSF51556 54 381 2.0E-93 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 Gene3D G3DSA:3.20.20.140 63 278 4.5E-50 T 28-03-2018 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 Gene3D G3DSA:3.20.20.140 279 422 1.3E-40 T 28-03-2018 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 SUPERFAMILY SSF51338 350 456 7.02E-35 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 Pfam PF01979 Amidohydrolase family 50 434 9.4E-21 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS20920 cb5e83887e07739ed3219b6e81ce8344 468 SUPERFAMILY SSF51338 1 64 4.94E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 Gene3D G3DSA:1.10.10.10 1 76 3.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 SMART SM00345 15 74 3.4E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 SUPERFAMILY SSF46785 5 78 1.72E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 Pfam PF07702 UTRA domain 99 234 1.9E-25 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 SUPERFAMILY SSF64288 62 234 1.35E-28 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 Gene3D G3DSA:3.40.1410.10 77 236 3.5E-28 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 74 1.6E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS24180 575a488e8b2227261deb5d3f43d1f1ed 240 SMART SM00866 96 235 3.1E-21 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS12405 f0aab4453e2645ced88394af7c10461c 365 SUPERFAMILY SSF51395 4 364 9.87E-124 T 28-03-2018 CI104_RS12405 f0aab4453e2645ced88394af7c10461c 365 Gene3D G3DSA:3.20.20.70 5 365 5.9E-128 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS12405 f0aab4453e2645ced88394af7c10461c 365 Pfam PF00724 NADH:flavin oxidoreductase / NADH oxidase family 5 344 2.0E-91 T 28-03-2018 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal GO:0010181|GO:0016491|GO:0055114 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 SUPERFAMILY SSF46785 4 60 1.72E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Pfam PF02237 Biotin protein ligase C terminal domain 271 317 8.4E-11 T 28-03-2018 IPR003142 Biotin protein ligase, C-terminal GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 TIGRFAM TIGR00122 birA_repr_reg: biotin operon repressor 6 76 5.7E-28 T 28-03-2018 IPR004409 Biotin operon repressor, helix-turn-helix domain GO:0006355 KEGG: 00780+6.3.4.15 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 SUPERFAMILY SSF50037 271 317 1.6E-10 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Pfam PF03099 Biotin/lipoate A/B protein ligase family 84 208 3.6E-24 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Pfam PF08279 HTH domain 10 58 1.3E-12 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Hamap MF_00978 Bifunctional ligase/repressor BirA [birA]. 7 317 32.682 T 28-03-2018 IPR030855 Bifunctional ligase/repressor BirA GO:0004077|GO:0006355 KEGG: 00780+6.3.4.15 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Gene3D G3DSA:1.10.10.10 1 64 1.8E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Gene3D G3DSA:2.30.30.100 272 318 9.4E-14 T 28-03-2018 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 TIGRFAM TIGR00121 birA_ligase: biotin--[acetyl-CoA-carboxylase] ligase 81 317 5.9E-85 T 28-03-2018 IPR004408 Biotin--acetyl-CoA-carboxylase ligase GO:0004077|GO:0006464 KEGG: 00780+6.3.4.15|Reactome: R-HSA-196780 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 Gene3D G3DSA:3.30.930.10 65 270 5.9E-60 T 28-03-2018 CI104_RS23845 7b2383a464139238f7f12d5204ced362 320 SUPERFAMILY SSF55681 72 268 1.62E-57 T 28-03-2018 CI104_RS13270 33cc547fd495497d82248854d8f1ceb7 120 Gene3D G3DSA:3.40.50.10400 1 119 9.0E-21 T 28-03-2018 IPR027269 Hypothetical PA1492 domain CI104_RS13270 33cc547fd495497d82248854d8f1ceb7 120 Pfam PF14359 Domain of unknown function (DUF4406) 23 112 8.8E-5 T 28-03-2018 IPR025518 Protein of unknown function DUF4406 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Hamap MF_00164 Glutamine--fructose-6-phosphate aminotransferase [isomerizing] [glmS]. 1 609 41.547 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 SUPERFAMILY SSF53697 245 609 5.47E-115 T 28-03-2018 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Gene3D G3DSA:3.40.50.10490 458 607 3.6E-52 T 28-03-2018 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Gene3D G3DSA:3.40.50.10490 240 457 1.6E-59 T 28-03-2018 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Pfam PF13522 Glutamine amidotransferase domain 65 182 8.8E-22 T 28-03-2018 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 TIGRFAM TIGR01135 glmS: glutamine-fructose-6-phosphate transaminase (isomerizing) 2 609 1.3E-270 T 28-03-2018 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising GO:0004360|GO:1901137 KEGG: 00250+2.6.1.16|KEGG: 00520+2.6.1.16|MetaCyc: PWY-6749|Reactome: R-HSA-446210 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Pfam PF01380 SIS domain 462 591 1.2E-30 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Pfam PF01380 SIS domain 289 418 2.8E-34 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 Gene3D G3DSA:3.60.20.10 2 239 3.0E-69 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS25200 900d35632f27a3851bd6dce73b8514ed 609 SUPERFAMILY SSF56235 2 232 2.83E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS21745 adc41fe675dac07d1aedbc2cb3048e67 180 Pfam PF04002 RadC-like JAB domain 60 178 8.0E-43 T 28-03-2018 IPR025657 RadC-like JAB domain CI104_RS21745 adc41fe675dac07d1aedbc2cb3048e67 180 TIGRFAM TIGR00608 radc: DNA repair protein RadC 44 180 5.3E-45 T 28-03-2018 IPR001405 RadC protein CI104_RS21745 adc41fe675dac07d1aedbc2cb3048e67 180 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 129 134 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CI104_RS21745 adc41fe675dac07d1aedbc2cb3048e67 180 Gene3D G3DSA:3.40.140.10 56 180 1.0E-45 T 28-03-2018 CI104_RS21745 adc41fe675dac07d1aedbc2cb3048e67 180 SUPERFAMILY SSF102712 108 147 3.66E-5 T 28-03-2018 CI104_RS18035 1693210217413bc5a385a618ad8400f0 130 Gene3D G3DSA:1.10.10.10 1 21 0.0031 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18035 1693210217413bc5a385a618ad8400f0 130 Pfam PF07037 Putative transcription regulator (DUF1323) 8 128 3.0E-54 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CI104_RS18035 1693210217413bc5a385a618ad8400f0 130 ProDom PD060594 TRANSCRIPTION YFED YFEC DNA-BINDING REGULATION NEGATIVE REGULATOR STY2653 ECS3274 STY2652 8 128 6.0E-52 T 28-03-2018 IPR010749 Protein of unknown function DUF1323 CI104_RS18035 1693210217413bc5a385a618ad8400f0 130 SUPERFAMILY SSF46955 5 82 4.03E-13 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS18035 1693210217413bc5a385a618ad8400f0 130 Gene3D G3DSA:1.10.10.10 22 62 1.4E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 Pfam PF00072 Response regulator receiver domain 3 113 1.1E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 SMART SM00448 1 112 7.9E-47 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 SUPERFAMILY SSF46894 123 225 9.92E-29 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 Gene3D G3DSA:1.10.10.10 124 228 1.6E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 SUPERFAMILY SSF52172 1 126 6.55E-43 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 Gene3D G3DSA:3.40.50.2300 1 123 1.1E-39 T 28-03-2018 CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 Pfam PF00486 Transcriptional regulatory protein, C terminal 150 224 2.7E-24 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS24415 2a0534cf625e614c025de26aa906d234 228 SMART SM00862 149 225 4.9E-23 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS24185 20c2764241454e0f4362c0c76b164cb6 346 Pfam PF03747 ADP-ribosylglycohydrolase 10 323 1.2E-51 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CI104_RS24185 20c2764241454e0f4362c0c76b164cb6 346 SUPERFAMILY SSF101478 5 344 1.28E-61 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CI104_RS24185 20c2764241454e0f4362c0c76b164cb6 346 Gene3D G3DSA:1.10.4080.10 3 344 6.8E-62 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 32 264 2.5E-97 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 SUPERFAMILY SSF69189 284 377 7.65E-23 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 Gene3D G3DSA:3.40.710.10 15 301 3.1E-57 T 28-03-2018 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 Gene3D G3DSA:2.60.410.10 302 375 1.1E-17 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 SMART SM00936 284 375 9.5E-29 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 SUPERFAMILY SSF56601 12 284 1.0E-75 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 284 375 7.7E-21 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 123 140 1.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 150 163 1.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS16305 287ba84d7fce0082b623976672b858ed 390 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 64 75 1.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 Pfam PF01380 SIS domain 126 207 1.3E-10 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 Hamap MF_00068 N-acetylmuramic acid 6-phosphate etherase [murQ]. 2 295 43.308 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 TIGRFAM TIGR00274 TIGR00274: N-acetylmuramic acid 6-phosphate etherase 6 295 2.1E-125 T 28-03-2018 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ GO:0016835|GO:0046348 KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 Gene3D G3DSA:3.40.50.10490 10 239 1.4E-57 T 28-03-2018 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 SUPERFAMILY SSF53697 4 248 7.12E-77 T 28-03-2018 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 Gene3D G3DSA:1.10.8.10 269 296 0.0089 T 28-03-2018 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 Gene3D G3DSA:1.10.8.10 240 268 1.3E-8 T 28-03-2018 CI104_RS18780 eaad6ef50c84fbb26e4873e4c7b4e43b 300 ProSitePatterns PS01272 Glucokinase regulatory protein family signature. 185 202 - T 28-03-2018 IPR005486 Glucokinase regulatory protein, conserved site KEGG: 00030+4.2.1.12|KEGG: 00520+4.2.1.126|Reactome: R-HSA-170822|Reactome: R-HSA-5619107 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 SUPERFAMILY SSF48179 349 484 9.86E-41 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 SUPERFAMILY SSF48179 210 369 6.8E-42 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Gene3D G3DSA:1.10.1040.10 210 487 8.7E-89 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 TIGRFAM TIGR00465 ilvC: ketol-acid reductoisomerase 35 368 6.5E-137 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Hamap MF_00435 Ketol-acid reductoisomerase (NADP(+)) [ilvC]. 22 485 38.981 T 28-03-2018 IPR013023 Ketol-acid reductoisomerase GO:0009082|GO:0016491|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 SUPERFAMILY SSF51735 30 209 6.06E-58 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 357 482 3.7E-23 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Pfam PF01450 Acetohydroxy acid isomeroreductase, catalytic domain 210 342 1.4E-28 T 28-03-2018 IPR000506 Acetohydroxy acid isomeroreductase C-terminal GO:0004455|GO:0009082|GO:0055114 KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Pfam PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain 35 204 1.4E-58 T 28-03-2018 IPR013116 Acetohydroxy acid isomeroreductase, NADPH-binding domain KEGG: 00290+1.1.1.86|KEGG: 00770+1.1.1.86|MetaCyc: PWY-5103|MetaCyc: PWY-7111 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Gene3D G3DSA:3.40.50.720 56 208 6.5E-52 T 28-03-2018 CI104_RS24980 719701e8d406f9f51bec7ca4147a0ef7 491 Gene3D G3DSA:3.40.50.720 1 42 7.3E-5 T 28-03-2018 CI104_RS20025 e41d2cf7bbf685e4a81643d4b14d0eee 518 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 420 503 2.6E-19 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS20025 e41d2cf7bbf685e4a81643d4b14d0eee 518 Pfam PF02378 Phosphotransferase system, EIIC 21 359 4.3E-93 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS20025 e41d2cf7bbf685e4a81643d4b14d0eee 518 Pfam PF00367 phosphotransferase system, EIIB 447 479 9.7E-14 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS20025 e41d2cf7bbf685e4a81643d4b14d0eee 518 SUPERFAMILY SSF55604 444 517 4.71E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS20025 e41d2cf7bbf685e4a81643d4b14d0eee 518 Gene3D G3DSA:3.30.1360.60 442 517 4.0E-28 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS20025 e41d2cf7bbf685e4a81643d4b14d0eee 518 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 457 474 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 Pfam PF07690 Major Facilitator Superfamily 29 282 6.2E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 ProSitePatterns PS00216 Sugar transport proteins signature 1. 78 94 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 ProSitePatterns PS00217 Sugar transport proteins signature 2. 120 145 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 SUPERFAMILY SSF103473 10 433 1.96E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 Gene3D G3DSA:1.20.1250.20 13 216 4.7E-42 T 28-03-2018 CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 Gene3D G3DSA:1.20.1250.20 234 456 8.6E-26 T 28-03-2018 CI104_RS00885 f7ba3d742b632a042ff288ccb82fc8a7 456 TIGRFAM TIGR00895 2A0115: MFS transporter, aromatic acid:H+ symporter (AAHS) family 7 403 1.8E-133 T 28-03-2018 IPR004746 Major facilitator superfamily, aromatic acid:H+ symporter family GO:0005215|GO:0006810|GO:0016021 CI104_RS25660 e35798f10994844103e51043b596f382 513 Pfam PF14319 Transposase zinc-binding domain 40 143 7.4E-27 T 28-03-2018 IPR026889 Transposase zinc-binding domain CI104_RS25660 e35798f10994844103e51043b596f382 513 Gene3D G3DSA:2.10.230.10 75 489 0.013 T 28-03-2018 CI104_RS25660 e35798f10994844103e51043b596f382 513 Pfam PF04986 Putative transposase 172 396 8.5E-61 T 28-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CI104_RS25690 e35798f10994844103e51043b596f382 513 Pfam PF14319 Transposase zinc-binding domain 40 143 7.4E-27 T 28-03-2018 IPR026889 Transposase zinc-binding domain CI104_RS25690 e35798f10994844103e51043b596f382 513 Gene3D G3DSA:2.10.230.10 75 489 0.013 T 28-03-2018 CI104_RS25690 e35798f10994844103e51043b596f382 513 Pfam PF04986 Putative transposase 172 396 8.5E-61 T 28-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CI104_RS25720 e35798f10994844103e51043b596f382 513 Pfam PF14319 Transposase zinc-binding domain 40 143 7.4E-27 T 28-03-2018 IPR026889 Transposase zinc-binding domain CI104_RS25720 e35798f10994844103e51043b596f382 513 Gene3D G3DSA:2.10.230.10 75 489 0.013 T 28-03-2018 CI104_RS25720 e35798f10994844103e51043b596f382 513 Pfam PF04986 Putative transposase 172 396 8.5E-61 T 28-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Gene3D G3DSA:2.40.40.20 1047 1237 1.6E-46 T 28-03-2018 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Pfam PF14710 Respiratory nitrate reductase alpha N-terminal 4 40 6.3E-16 T 28-03-2018 IPR028189 Nitrate reductase, alpha subunit, N-terminal KEGG: 00910+1.7.99.4 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Gene3D G3DSA:2.20.25.90 55 98 1.3E-28 T 28-03-2018 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 48 66 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Pfam PF01568 Molydopterin dinucleotide binding domain 1087 1199 1.7E-20 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Gene3D G3DSA:3.40.50.740 108 213 0.0025 T 28-03-2018 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Gene3D G3DSA:3.30.2070.10 794 834 8.0E-5 T 28-03-2018 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 776 793 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Pfam PF00384 Molybdopterin oxidoreductase 108 831 1.2E-166 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 SMART SM00926 43 105 6.6E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 TIGRFAM TIGR01580 narG: nitrate reductase, alpha subunit 2 1234 0.0 T 28-03-2018 IPR006468 Nitrate reductase, alpha subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Gene3D G3DSA:3.40.228.10 225 659 4.6E-104 T 28-03-2018 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 Gene3D G3DSA:4.10.1200.10 1 26 9.0E-15 T 28-03-2018 CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 SUPERFAMILY SSF50692 1082 1235 1.18E-46 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS13225 57cb64300052f682ff2c3f89daac4fff 1246 SUPERFAMILY SSF53706 5 1070 0.0 T 28-03-2018 CI104_RS22870 07519abc5253af2bc3e19d4a07ae033c 223 Gene3D G3DSA:3.40.30.10 48 223 1.9E-20 T 28-03-2018 CI104_RS22870 07519abc5253af2bc3e19d4a07ae033c 223 Pfam PF01323 DSBA-like thioredoxin domain 113 214 3.0E-10 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CI104_RS22870 07519abc5253af2bc3e19d4a07ae033c 223 PIRSF PIRSF001488 21 221 7.6E-24 T 28-03-2018 IPR023205 Thiol:disulphide interchange protein DsbA/DsbL CI104_RS22870 07519abc5253af2bc3e19d4a07ae033c 223 SUPERFAMILY SSF52833 58 219 6.56E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS22625 eb9abed7b1346e04dac2d229f4a3d6b6 131 Gene3D G3DSA:1.20.1300.10 3 128 2.7E-57 T 28-03-2018 CI104_RS22625 eb9abed7b1346e04dac2d229f4a3d6b6 131 ProDom PD015900 FUMARATE MEMBRANE REDUCTASE C SUBUNIT TRANSMEMBRANE INNER HYDROPHOBIC REDUCTASE POLYPEPTIDE 8 114 7.0E-47 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CI104_RS22625 eb9abed7b1346e04dac2d229f4a3d6b6 131 Hamap MF_00708 Fumarate reductase subunit C [frdC]. 2 128 29.882 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CI104_RS22625 eb9abed7b1346e04dac2d229f4a3d6b6 131 PIRSF PIRSF000180 2 130 2.5E-61 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CI104_RS22625 eb9abed7b1346e04dac2d229f4a3d6b6 131 SUPERFAMILY SSF81343 2 131 4.58E-58 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22625 eb9abed7b1346e04dac2d229f4a3d6b6 131 Pfam PF02300 Fumarate reductase subunit C 3 128 1.7E-56 T 28-03-2018 IPR003510 Fumarate reductase, subunit C GO:0016020 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 ProSitePatterns PS00694 Enterobacterial virulence outer membrane protein signature 1. 46 54 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 45 57 9.4E-40 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 132 153 9.4E-40 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 159 170 9.4E-40 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 PRINTS PR00316 Enterobacterial virulence outer membrane protein signature 85 108 9.4E-40 T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 ProSitePatterns PS00695 Enterobacterial virulence outer membrane protein signature 2. 163 171 - T 28-03-2018 IPR000758 Virulence-related outer membrane protein GO:0009279 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 SUPERFAMILY SSF56925 27 171 3.14E-33 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 Pfam PF13505 Outer membrane protein beta-barrel domain 9 171 5.0E-24 T 28-03-2018 IPR027385 Outer membrane protein beta-barrel CI104_RS08475 20d973ceb99b8108944b7aabd57ce55a 171 Gene3D G3DSA:2.40.160.20 22 171 2.3E-22 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS09780 a50f46be96bf76c44339b509cc965b61 151 Pfam PF04965 Gene 25-like lysozyme 36 117 1.2E-10 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CI104_RS09780 a50f46be96bf76c44339b509cc965b61 151 SUPERFAMILY SSF160719 34 122 1.16E-16 T 28-03-2018 CI104_RS09780 a50f46be96bf76c44339b509cc965b61 151 Gene3D G3DSA:3.10.450.40 3 134 8.3E-16 T 28-03-2018 CI104_RS09780 a50f46be96bf76c44339b509cc965b61 151 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 7 117 1.1E-22 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 SUPERFAMILY SSF54665 5 158 1.01E-41 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Gene3D G3DSA:3.30.365.10 600 764 2.0E-43 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Pfam PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase 160 700 1.3E-162 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Gene3D G3DSA:3.30.365.10 168 275 4.3E-28 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 SMART SM01008 23 139 2.1E-45 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Pfam PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain 23 139 8.6E-35 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Gene3D G3DSA:3.90.1170.50 1 139 9.3E-37 T 28-03-2018 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Gene3D G3DSA:3.30.365.10 463 599 5.7E-37 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 Gene3D G3DSA:3.30.365.10 276 435 4.0E-42 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS20885 1e5373c4753dd47d998da8746cf61dc1 765 SUPERFAMILY SSF56003 143 759 3.93E-179 T 28-03-2018 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding GO:0016491|GO:0055114 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Gene3D G3DSA:2.40.40.20 677 814 5.3E-36 T 28-03-2018 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Gene3D G3DSA:2.20.25.90 51 121 4.6E-18 T 28-03-2018 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 731 758 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Pfam PF01568 Molydopterin dinucleotide binding domain 695 806 9.5E-28 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Gene3D G3DSA:3.40.228.10 612 676 3.2E-13 T 28-03-2018 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 56 116 9.5E-18 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 SUPERFAMILY SSF53706 57 697 7.07E-181 T 28-03-2018 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Gene3D G3DSA:3.90.55.10 539 611 1.8E-22 T 28-03-2018 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 517 534 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 14 814 0.0 T 28-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Pfam PF00384 Molybdopterin oxidoreductase 119 576 1.7E-109 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 61 79 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 SUPERFAMILY SSF50692 641 814 5.88E-40 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 Gene3D G3DSA:3.40.228.10 205 489 2.4E-64 T 28-03-2018 CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 TIGRFAM TIGR01409 TAT_signal_seq: Tat (twin-arginine translocation) pathway signal sequence 14 45 8.4E-4 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CI104_RS08940 45598250763d9116a2a27ffd8ca4a021 814 SMART SM00926 56 116 1.8E-9 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS07180 8d21d85371a0c152d4a41901f6ce8f75 234 Pfam PF13302 Acetyltransferase (GNAT) domain 36 173 6.0E-16 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS07180 8d21d85371a0c152d4a41901f6ce8f75 234 SUPERFAMILY SSF55729 26 198 2.32E-36 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS07180 8d21d85371a0c152d4a41901f6ce8f75 234 Gene3D G3DSA:3.40.630.30 17 228 2.5E-27 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 Gene3D G3DSA:3.50.30.20 2 151 3.0E-63 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 SUPERFAMILY SSF52021 3 142 5.62E-57 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 349 362 3.2E-11 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 264 275 3.2E-11 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00096 Glutamine amidotransferase superfamily signature 236 245 3.2E-11 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 Pfam PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain 5 132 3.5E-52 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 233 247 2.5E-40 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 306 317 2.5E-40 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 264 280 2.5E-40 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 281 298 2.5E-40 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 194 208 2.5E-40 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 TIGRFAM TIGR01368 CPSaseIIsmall: carbamoyl-phosphate synthase, small subunit 5 375 6.9E-153 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 SMART SM01097 3 133 7.1E-91 T 28-03-2018 IPR002474 Carbamoyl-phosphate synthase small subunit, N-terminal domain KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 SUPERFAMILY SSF52317 153 375 2.14E-65 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 Pfam PF00117 Glutamine amidotransferase class-I 197 372 1.8E-50 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 Hamap MF_01209 Carbamoyl-phosphate synthase small chain [carA]. 3 378 48.752 T 28-03-2018 IPR006274 Carbamoyl-phosphate synthase, small subunit GO:0004088|GO:0006207|GO:0006541 KEGG: 00240+6.3.5.5|KEGG: 00250+6.3.5.5|MetaCyc: PWY-5154|MetaCyc: PWY-5686|MetaCyc: PWY-7400|MetaCyc: PWY-7790|MetaCyc: PWY-7791 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 Gene3D G3DSA:3.40.50.880 152 379 1.2E-68 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00097 Anthranilate synthase component II signature 264 275 1.1E-5 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00097 Anthranilate synthase component II signature 236 245 1.1E-5 T 28-03-2018 CI104_RS04615 97361308a2e0b02ae092fcd5809bd961 382 PRINTS PR00097 Anthranilate synthase component II signature 349 362 1.1E-5 T 28-03-2018 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 Gene3D G3DSA:3.20.20.140 55 307 1.0E-11 T 28-03-2018 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 TIGRFAM TIGR02318 phosphono_phnM: phosphonate metabolism protein PhnM 2 378 4.6E-162 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 Gene3D G3DSA:2.30.40.10 308 378 1.8E-12 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 SUPERFAMILY SSF51338 1 50 6.0E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 SUPERFAMILY SSF51338 345 377 6.0E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 SUPERFAMILY SSF51556 50 345 2.04E-22 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS23115 62957f998afa7231c522858f062cb30c 378 Pfam PF07969 Amidohydrolase family 285 378 3.9E-12 T 28-03-2018 IPR013108 Amidohydrolase 3 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 PIRSF PIRSF038971 1 378 8.9E-154 T 28-03-2018 IPR012696 Phosphonate metabolism PhnM GO:0019700 KEGG: 00440+3.6.1.63|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23115 62957f998afa7231c522858f062cb30c 378 Gene3D G3DSA:2.30.40.10 1 54 4.0E-7 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS11080 fc9dede5715dcd30e991166d9dfccb7b 115 SUPERFAMILY SSF46785 11 79 3.54E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11080 fc9dede5715dcd30e991166d9dfccb7b 115 Gene3D G3DSA:1.10.10.10 11 77 2.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11080 fc9dede5715dcd30e991166d9dfccb7b 115 Pfam PF01726 LexA DNA binding domain 10 74 4.3E-19 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CI104_RS05820 c83f06b84c23daecb8f780003caa6d88 104 SUPERFAMILY SSF52794 1 99 1.67E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS05820 c83f06b84c23daecb8f780003caa6d88 104 Gene3D G3DSA:3.40.50.2300 2 103 6.8E-16 T 28-03-2018 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 Pfam PF00512 His Kinase A (phospho-acceptor) domain 389 450 1.4E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 Gene3D G3DSA:3.30.565.10 453 606 5.4E-37 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 SMART SM00387 495 602 2.2E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 496 599 4.4E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 SMART SM00091 262 329 1.3E-10 T 28-03-2018 IPR000014 PAS domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 SUPERFAMILY SSF55785 253 367 2.09E-18 T 28-03-2018 IPR000014 PAS domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 SMART SM00388 388 453 1.8E-18 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 Gene3D G3DSA:3.30.450.20 244 382 2.6E-27 T 28-03-2018 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 Pfam PF00989 PAS fold 265 369 2.7E-20 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 265 380 6.6E-18 T 28-03-2018 IPR000014 PAS domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 Gene3D G3DSA:1.10.287.130 383 449 2.4E-16 T 28-03-2018 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 SUPERFAMILY SSF47384 380 452 2.35E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 SUPERFAMILY SSF55874 443 602 4.32E-40 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17245 23913cea7f5c80a656ca355770447846 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 551 561 9.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 533 547 9.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 562 580 9.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17245 23913cea7f5c80a656ca355770447846 608 PRINTS PR00344 Bacterial sensor protein C-terminal signature 586 599 9.1E-17 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS17840 cb6999881831a9975cb73fa8146e90b7 94 Pfam PF04175 Protein of unknown function (DUF406) 3 94 1.2E-38 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CI104_RS17840 cb6999881831a9975cb73fa8146e90b7 94 TIGRFAM TIGR00743 TIGR00743: conserved hypothetical protein 1 94 4.6E-45 T 28-03-2018 IPR005272 Conserved hypothetical protein CHP00743 CI104_RS17840 cb6999881831a9975cb73fa8146e90b7 94 Gene3D G3DSA:3.30.70.860 15 94 2.3E-33 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain CI104_RS01300 a454668f034ad3f5156a4ff21f9350a1 563 Gene3D G3DSA:3.90.550.10 8 256 1.2E-22 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS01300 a454668f034ad3f5156a4ff21f9350a1 563 Pfam PF00535 Glycosyl transferase family 2 8 127 3.0E-18 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS01300 a454668f034ad3f5156a4ff21f9350a1 563 SUPERFAMILY SSF53448 8 240 2.66E-30 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 Gene3D G3DSA:3.40.50.2300 176 313 1.3E-43 T 28-03-2018 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 1.2E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 Gene3D G3DSA:3.40.50.2300 55 175 5.5E-30 T 28-03-2018 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 2.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 2.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 Gene3D G3DSA:1.10.260.40 2 54 8.4E-24 T 28-03-2018 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 SUPERFAMILY SSF53822 61 334 5.39E-74 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 Pfam PF13377 Periplasmic binding protein-like domain 169 329 3.9E-33 T 28-03-2018 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 SUPERFAMILY SSF47413 1 59 6.14E-19 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS20420 0cd439219586b19f0653030a12afb7cb 339 SMART SM00354 1 71 2.4E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS25620 98cfeeb2df4976cc29329d488f174381 337 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 2.1E-24 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS25620 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.443.10 112 318 2.9E-46 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25620 98cfeeb2df4976cc29329d488f174381 337 Pfam PF00589 Phage integrase family 116 317 4.3E-64 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25620 98cfeeb2df4976cc29329d488f174381 337 SUPERFAMILY SSF56349 16 316 1.41E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS25620 98cfeeb2df4976cc29329d488f174381 337 TIGRFAM TIGR02249 integrase_gron: integron integrase 16 330 1.8E-153 T 28-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CI104_RS25620 98cfeeb2df4976cc29329d488f174381 337 Gene3D G3DSA:1.10.150.130 13 97 4.1E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 45 534 5.2E-181 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 Hamap MF_01068 Glucans biosynthesis protein D [mdoD]. 1 544 60.457 T 28-03-2018 IPR023724 Glucan biosynthesis, MdoD CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 SUPERFAMILY SSF81296 422 537 1.54E-27 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 PIRSF PIRSF006281 1 538 3.7E-204 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 Gene3D G3DSA:2.60.40.10 423 538 1.0E-26 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 Gene3D G3DSA:2.70.98.10 45 419 1.9E-155 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS13535 35e4fc40a9ad3e9a9db0f1039ba0310b 551 SUPERFAMILY SSF74650 45 422 1.44E-146 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS01495 55f46bbdbe9be79650d67d365094413e 125 ProDom PD059127 YHHA MEMBRANE OUTER PRECURSOR SIGNAL STY4259 ORFQ ECS4294 1 122 8.0E-17 T 28-03-2018 IPR020158 Protein of unknown function DUF2756 CI104_RS01495 55f46bbdbe9be79650d67d365094413e 125 Pfam PF10956 Protein of unknown function (DUF2756) 1 99 3.4E-45 T 28-03-2018 IPR020158 Protein of unknown function DUF2756 CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 SUPERFAMILY SSF52540 268 489 2.38E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 Gene3D G3DSA:3.40.50.300 6 261 1.1E-54 T 28-03-2018 CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 SUPERFAMILY SSF52540 9 232 2.11E-59 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 Gene3D G3DSA:3.40.50.300 264 491 4.3E-39 T 28-03-2018 CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 ProSitePatterns PS00211 ABC transporters family signature. 403 417 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 Pfam PF00005 ABC transporter 279 430 2.3E-18 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 Pfam PF00005 ABC transporter 25 174 2.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 SMART SM00382 285 479 0.47 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS22270 8a017ee961170e7d8e6341e414e1b4ba 500 SMART SM00382 34 222 1.6E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 Pfam PF08267 Cobalamin-independent synthase, N-terminal domain 5 312 1.5E-125 T 28-03-2018 IPR013215 Cobalamin-independent methionine synthase MetE, N-terminal GO:0003871|GO:0008270|GO:0008652 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 SUPERFAMILY SSF51726 5 389 4.58E-113 T 28-03-2018 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 Hamap MF_00172 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [metE]. 3 753 37.475 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 Gene3D G3DSA:3.20.20.210 3 385 7.1E-140 T 28-03-2018 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 TIGRFAM TIGR01371 met_syn_B12ind: 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase 8 752 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 SUPERFAMILY SSF51726 391 752 2.09E-119 T 28-03-2018 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 PIRSF PIRSF000382 2 753 0.0 T 28-03-2018 IPR006276 Cobalamin-independent methionine synthase GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 Pfam PF01717 Cobalamin-independent synthase, Catalytic domain 426 749 9.0E-162 T 28-03-2018 IPR002629 Cobalamin-independent methionine synthase MetE, C-terminal/archaeal GO:0003871|GO:0008270|GO:0009086 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS24725 52b67adb3c7c0e7e3aa67c1107cc55c3 753 Gene3D G3DSA:3.20.20.210 386 753 1.0E-128 T 28-03-2018 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 Gene3D G3DSA:3.20.20.80 3 459 3.9E-146 T 28-03-2018 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 404 421 2.7E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 288 302 2.7E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 428 440 2.7E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 383 394 2.7E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 PRINTS PR00131 Glycosyl hydrolase family 1 signature 360 368 2.7E-15 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 360 368 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 SUPERFAMILY SSF51445 1 460 4.98E-160 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS00255 6b44fdfa23746efdfa8585d2b63f4028 460 Pfam PF00232 Glycosyl hydrolase family 1 3 458 1.4E-133 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS16375 38ff75a88540746d77b3c4c5b9dd0aab 258 Gene3D G3DSA:3.20.20.70 4 252 3.2E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS16375 38ff75a88540746d77b3c4c5b9dd0aab 258 Hamap MF_01013 Imidazole glycerol phosphate synthase subunit HisF [hisF]. 1 256 44.77 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CI104_RS16375 38ff75a88540746d77b3c4c5b9dd0aab 258 Pfam PF00977 Histidine biosynthesis protein 5 239 1.5E-77 T 28-03-2018 IPR006062 Histidine biosynthesis GO:0000105 CI104_RS16375 38ff75a88540746d77b3c4c5b9dd0aab 258 SUPERFAMILY SSF51366 1 257 5.89E-73 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS16375 38ff75a88540746d77b3c4c5b9dd0aab 258 TIGRFAM TIGR00735 hisF: imidazoleglycerol phosphate synthase, cyclase subunit 1 256 8.2E-117 T 28-03-2018 IPR004651 Histidine biosynthesis, HisF GO:0000105|GO:0000107|GO:0005737 CI104_RS18960 02c3eb89897ed662f8f7248e44419f3c 245 SUPERFAMILY SSF48452 27 121 2.66E-9 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS18960 02c3eb89897ed662f8f7248e44419f3c 245 Gene3D G3DSA:1.25.20.10 30 244 1.1E-15 T 28-03-2018 CI104_RS18960 02c3eb89897ed662f8f7248e44419f3c 245 Hamap MF_00922 Outer membrane protein assembly factor BamD [bamD]. 4 242 39.598 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD CI104_RS18960 02c3eb89897ed662f8f7248e44419f3c 245 TIGRFAM TIGR03302 OM_YfiO: outer membrane assembly lipoprotein YfiO 5 243 3.6E-89 T 28-03-2018 IPR017689 Outer membrane protein assembly factor BamD CI104_RS18960 02c3eb89897ed662f8f7248e44419f3c 245 Pfam PF13525 Outer membrane lipoprotein 28 236 3.4E-86 T 28-03-2018 CI104_RS00735 00237a33fbc3543d6ccf510fea6e16ec 202 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 73 9.4E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS00735 00237a33fbc3543d6ccf510fea6e16ec 202 Gene3D G3DSA:1.20.1050.10 87 202 9.7E-11 T 28-03-2018 CI104_RS00735 00237a33fbc3543d6ccf510fea6e16ec 202 Gene3D G3DSA:3.40.30.10 1 86 3.8E-18 T 28-03-2018 CI104_RS00735 00237a33fbc3543d6ccf510fea6e16ec 202 Pfam PF00043 Glutathione S-transferase, C-terminal domain 97 192 1.6E-8 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS00735 00237a33fbc3543d6ccf510fea6e16ec 202 SUPERFAMILY SSF47616 74 199 1.74E-13 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS00735 00237a33fbc3543d6ccf510fea6e16ec 202 SUPERFAMILY SSF52833 1 100 3.45E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS23535 4422bdacc16d7fdb87b8489bd1d18a83 317 Pfam PF13936 Helix-turn-helix domain 14 47 1.5E-8 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain CI104_RS23535 4422bdacc16d7fdb87b8489bd1d18a83 317 SUPERFAMILY SSF46689 9 56 8.42E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23535 4422bdacc16d7fdb87b8489bd1d18a83 317 Gene3D G3DSA:1.10.10.60 3 54 6.7E-20 T 28-03-2018 CI104_RS23535 4422bdacc16d7fdb87b8489bd1d18a83 317 Gene3D G3DSA:3.40.50.1360 55 317 7.6E-34 T 28-03-2018 CI104_RS23535 4422bdacc16d7fdb87b8489bd1d18a83 317 Pfam PF04198 Putative sugar-binding domain 61 317 2.1E-76 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CI104_RS23535 4422bdacc16d7fdb87b8489bd1d18a83 317 SUPERFAMILY SSF100950 64 317 6.45E-65 T 28-03-2018 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 Pfam PF03170 Bacterial cellulose synthase subunit 77 686 4.3E-224 T 28-03-2018 IPR018513 Cellulose synthase BcsB, bacterial GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 238 261 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 106 127 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 196 217 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 572 592 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 402 423 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 319 340 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS01055 943ec3ef2bea22e7fca6d656c1e1d4ec 785 PRINTS PR01440 Cellulose synthase subunit B signature 535 554 1.7E-29 T 28-03-2018 IPR003920 Cellulose synthase, subunit B GO:0006011|GO:0016020 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01021 OMPA domain signature 275 291 8.4E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01021 OMPA domain signature 260 275 8.4E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01021 OMPA domain signature 228 250 8.4E-24 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 ProSitePatterns PS01068 OmpA-like domain. 262 306 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 Gene3D G3DSA:3.30.1330.60 212 350 2.0E-40 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 Pfam PF00691 OmpA family 227 322 9.3E-24 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 SUPERFAMILY SSF56925 22 198 4.97E-46 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 Pfam PF01389 OmpA-like transmembrane domain 23 199 4.4E-76 T 28-03-2018 IPR000498 Outer membrane protein OmpA-like, transmembrane domain GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 216 231 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 284 303 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 183 197 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 245 264 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 318 331 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 169 183 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 PRINTS PR01022 Outer membrane protein A signature 107 123 8.5E-73 T 28-03-2018 IPR002368 Outer membrane protein, OmpA GO:0005198|GO:0009279|GO:0016021 CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 SUPERFAMILY SSF103088 216 339 8.63E-36 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS09250 6fc9eb58742724cd603f76485e015d4d 351 Gene3D G3DSA:2.40.160.20 9 211 1.9E-47 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 ProSitePatterns PS00358 Ribosomal protein L5 signature. 57 73 - T 28-03-2018 IPR020929 Ribosomal protein L5, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 Pfam PF00673 ribosomal L5P family C-terminus 84 177 5.4E-41 T 28-03-2018 IPR031309 Ribosomal protein L5, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 Gene3D G3DSA:3.30.1440.10 1 179 3.6E-81 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 PIRSF PIRSF002161 1 179 7.6E-67 T 28-03-2018 IPR002132 Ribosomal protein L5 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 Pfam PF00281 Ribosomal protein L5 24 80 1.1E-28 T 28-03-2018 IPR031310 Ribosomal protein L5, N-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 SUPERFAMILY SSF55282 4 179 1.88E-79 T 28-03-2018 IPR022803 Ribosomal protein L5 domain Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02105 dd56b1a1b3dec92037ad5913650793f9 179 Hamap MF_01333_B 50S ribosomal protein L5 [rplE]. 1 179 44.826 T 28-03-2018 IPR020930 Ribosomal protein L5, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS05310 e45a157c6d4649a9c6449d4ec38da8ea 185 SUPERFAMILY SSF55194 2 184 7.98E-72 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CI104_RS05310 e45a157c6d4649a9c6449d4ec38da8ea 185 Pfam PF01765 Ribosome recycling factor 20 183 2.5E-63 T 28-03-2018 IPR023584 Ribosome recycling factor domain Reactome: R-HSA-5419276 CI104_RS05310 e45a157c6d4649a9c6449d4ec38da8ea 185 TIGRFAM TIGR00496 frr: ribosome recycling factor 11 185 2.2E-81 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CI104_RS05310 e45a157c6d4649a9c6449d4ec38da8ea 185 Hamap MF_00040 Ribosome-recycling factor [frr]. 3 185 27.596 T 28-03-2018 IPR002661 Ribosome recycling factor GO:0006412 Reactome: R-HSA-5419276 CI104_RS05310 e45a157c6d4649a9c6449d4ec38da8ea 185 Gene3D G3DSA:1.10.132.20 2 74 7.1E-10 T 28-03-2018 CI104_RS05310 e45a157c6d4649a9c6449d4ec38da8ea 185 Gene3D G3DSA:1.10.132.20 75 184 1.3E-36 T 28-03-2018 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 SUPERFAMILY SSF52425 3 198 3.92E-54 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 PRINTS PR00147 DNA photolyase signature 323 339 2.1E-32 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 PRINTS PR00147 DNA photolyase signature 382 396 2.1E-32 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 PRINTS PR00147 DNA photolyase signature 343 361 2.1E-32 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 PRINTS PR00147 DNA photolyase signature 143 159 2.1E-32 T 28-03-2018 IPR002081 Cryptochrome/DNA photolyase class 1 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 SUPERFAMILY SSF48173 195 471 2.88E-107 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 Gene3D G3DSA:1.10.579.10 292 471 4.0E-75 T 28-03-2018 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 Gene3D G3DSA:3.40.50.620 1 127 3.5E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 ProSitePatterns PS00691 DNA photolyases class 1 signature 2. 343 362 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 Gene3D G3DSA:1.25.40.80 132 290 1.4E-38 T 28-03-2018 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 Pfam PF03441 FAD binding domain of DNA photolyase 273 467 6.5E-85 T 28-03-2018 IPR005101 Cryptochrome/DNA photolyase, FAD-binding domain Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 Pfam PF00875 DNA photolyase 5 167 8.2E-46 T 28-03-2018 IPR006050 DNA photolyase, N-terminal Reactome: R-HSA-1368108|Reactome: R-HSA-400253 CI104_RS07825 19cbd038d67827ffb6c91a6a4357f82d 472 ProSitePatterns PS00394 DNA photolyases class 1 signature 1. 323 335 - T 28-03-2018 IPR018394 Cryptochrome/DNA photolyase class 1, conserved site, C-terminal CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 Pfam PF06689 ClpX C4-type zinc finger 13 50 1.2E-20 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 SUPERFAMILY SSF57716 13 48 5.84E-12 T 28-03-2018 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 Hamap MF_00175 ATP-dependent Clp protease ATP-binding subunit ClpX [clpX]. 4 415 53.604 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 317 395 2.8E-17 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 SMART SM00994 12 51 1.0E-24 T 28-03-2018 IPR010603 Zinc finger, ClpX C4-type GO:0008270|GO:0046983 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 Pfam PF07724 AAA domain (Cdc48 subfamily) 112 310 1.0E-48 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 Gene3D G3DSA:3.40.50.300 56 315 1.3E-68 T 28-03-2018 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 SMART SM01086 317 412 8.8E-35 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 TIGRFAM TIGR00382 clpX: ATP-dependent Clp protease, ATP-binding subunit ClpX 5 412 6.0E-216 T 28-03-2018 IPR004487 Clp protease, ATP-binding subunit ClpX GO:0005524|GO:0006457|GO:0051082 CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 SMART SM00382 111 264 9.8E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 SUPERFAMILY SSF52540 64 402 2.38E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06425 bc878b83831428964a01082a9e7ee88d 424 Gene3D G3DSA:1.10.8.60 317 408 2.7E-33 T 28-03-2018 CI104_RS15670 e4ed16d6b7f04e2252d367eb230da929 120 Pfam PF01042 Endoribonuclease L-PSP 19 100 1.5E-7 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CI104_RS15670 e4ed16d6b7f04e2252d367eb230da929 120 SUPERFAMILY SSF55298 5 119 8.08E-26 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS15670 e4ed16d6b7f04e2252d367eb230da929 120 Gene3D G3DSA:3.30.1330.40 2 120 1.2E-17 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS24000 86d9806dd66833a886c99e665a503c5e 765 ProSitePatterns PS00850 Glycine radical domain signature. 736 744 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CI104_RS24000 86d9806dd66833a886c99e665a503c5e 765 Gene3D G3DSA:3.20.70.20 1 765 2.9E-268 T 28-03-2018 CI104_RS24000 86d9806dd66833a886c99e665a503c5e 765 Pfam PF02901 Pyruvate formate lyase-like 1 626 4.3E-200 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CI104_RS24000 86d9806dd66833a886c99e665a503c5e 765 Pfam PF01228 Glycine radical 646 747 7.8E-25 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CI104_RS24000 86d9806dd66833a886c99e665a503c5e 765 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 1 765 0.0 T 28-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS24000 86d9806dd66833a886c99e665a503c5e 765 SUPERFAMILY SSF51998 1 764 5.49E-217 T 28-03-2018 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Pfam PF00171 Aldehyde dehydrogenase family 659 1105 3.9E-112 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 SUPERFAMILY SSF51730 262 618 5.1E-124 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Gene3D G3DSA:3.40.309.10 901 1099 6.3E-46 T 28-03-2018 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Pfam PF01619 Proline dehydrogenase 270 569 5.9E-100 T 28-03-2018 IPR002872 Proline dehydrogenase domain KEGG: 00330+1.5.5.2|MetaCyc: PWY-5737|MetaCyc: PWY-6922|Reactome: R-HSA-70688 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 882 889 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 SUPERFAMILY SSF53720 656 1110 4.45E-124 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Pfam PF14850 DNA-binding domain of Proline dehydrogenase 148 259 4.0E-46 T 28-03-2018 IPR024082 Proline dehydrogenase PutA, domain II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Gene3D G3DSA:1.10.1220.10 2 49 1.5E-5 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Gene3D G3DSA:3.20.20.220 178 610 1.4E-110 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 SUPERFAMILY SSF81935 88 261 7.98E-66 T 28-03-2018 IPR024089 Proline dehydrogenase PutA, domain I/II GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 TIGRFAM TIGR01238 D1pyr5carbox3: delta-1-pyrroline-5-carboxylate dehydrogenase 610 1112 5.8E-262 T 28-03-2018 IPR005933 Delta-1-pyrroline-5-carboxylate dehydrogenase 3 GO:0003842|GO:0006561|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Gene3D G3DSA:1.20.5.550 89 137 3.1E-17 T 28-03-2018 IPR024090 Proline dehydrogenase PutA, domain I GO:0003842|GO:0055114 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 910 921 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 Gene3D G3DSA:3.40.605.10 651 900 8.4E-71 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 SUPERFAMILY SSF47598 3 45 1.56E-10 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS10175 101c39417cb68f7117e3f1b658d7d614 1320 PIRSF PIRSF000197 74 1320 0.0 T 28-03-2018 IPR025703 Bifunctional protein PutA GO:0003700|GO:0003842|GO:0004657|GO:0006355|GO:0010133 KEGG: 00250+1.2.1.88|KEGG: 00330+1.5.5.2+1.2.1.88|MetaCyc: PWY-5737|MetaCyc: PWY-6853|MetaCyc: PWY-6922 CI104_RS18425 f04ed5a45cbab41dbec84ddfe9b6c68c 119 Gene3D G3DSA:3.40.30.10 1 119 3.9E-37 T 28-03-2018 CI104_RS18425 f04ed5a45cbab41dbec84ddfe9b6c68c 119 Pfam PF03960 ArsC family 8 117 8.7E-22 T 28-03-2018 IPR006660 Arsenate reductase-like CI104_RS18425 f04ed5a45cbab41dbec84ddfe9b6c68c 119 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 5 118 2.8E-48 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CI104_RS18425 f04ed5a45cbab41dbec84ddfe9b6c68c 119 SUPERFAMILY SSF52833 5 118 8.44E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 Hamap MF_00661 ATP-dependent RNA helicase RhlB [rhlB]. 8 389 51.021 T 28-03-2018 IPR023554 ATP-dependent RNA helicase RhlB type GO:0004004 CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 Gene3D G3DSA:3.40.50.300 235 421 1.1E-43 T 28-03-2018 CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 Pfam PF00271 Helicase conserved C-terminal domain 243 351 3.6E-28 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 SMART SM00490 270 351 2.0E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 163 171 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 SMART SM00487 28 234 5.4E-52 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 SUPERFAMILY SSF52540 84 363 9.67E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 Gene3D G3DSA:3.40.50.300 3 234 1.7E-50 T 28-03-2018 CI104_RS24945 9c9c5519e57116d09e5ff2b8a82dd329 422 Pfam PF00270 DEAD/DEAH box helicase 33 206 1.5E-44 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 Gene3D G3DSA:1.10.8.60 309 381 7.9E-22 T 28-03-2018 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 Pfam PF00158 Sigma-54 interaction domain 136 302 1.5E-71 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 Gene3D G3DSA:3.40.50.2300 1 127 3.5E-34 T 28-03-2018 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 222 237 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 SUPERFAMILY SSF52540 136 380 3.33E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 SUPERFAMILY SSF46689 387 437 2.87E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 349 358 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 SUPERFAMILY SSF52172 5 180 2.13E-43 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 Gene3D G3DSA:3.40.50.300 131 308 6.6E-26 T 28-03-2018 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 SMART SM00448 6 117 4.5E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 Gene3D G3DSA:1.10.10.60 382 439 7.5E-9 T 28-03-2018 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 160 173 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 SMART SM00382 156 299 7.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS18735 629ba8014a81c972046c3977a9453a3d 444 Pfam PF00072 Response regulator receiver domain 9 117 4.0E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 SUPERFAMILY SSF55315 2 76 2.47E-20 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 SMART SM00967 4 80 8.8E-21 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 Hamap MF_01887 23S rRNA (guanosine-2'-O-)-methyltransferase RlmB [rlmB]. 2 243 44.103 T 28-03-2018 IPR024915 23S rRNA (guanosine-2-O-)-methyltransferase RlmB CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 Pfam PF00588 SpoU rRNA Methylase family 96 236 1.8E-40 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 Gene3D G3DSA:3.30.1330.30 1 76 1.2E-17 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 TIGRFAM TIGR00186 rRNA_methyl_3: RNA methyltransferase, TrmH family, group 3 1 242 1.1E-93 T 28-03-2018 IPR004441 RNA methyltransferase TrmH family GO:0006396|GO:0008173 Reactome: R-HSA-6793080 CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 Gene3D G3DSA:3.40.1280.10 77 243 3.7E-49 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 5 77 3.6E-18 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CI104_RS22495 6fb7f69804e385c70aa8877f935bb1e9 243 SUPERFAMILY SSF75217 68 242 3.86E-49 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS20760 65fc93e02977fa02926a04fc7fe39bbf 624 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 41 165 6.5E-25 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CI104_RS20760 65fc93e02977fa02926a04fc7fe39bbf 624 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 214 619 1.3E-87 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CI104_RS20760 65fc93e02977fa02926a04fc7fe39bbf 624 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 204 613 5.6E-93 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 Pfam PF02814 UreE urease accessory protein, N-terminal domain 13 62 2.0E-13 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 SMART SM00988 1 64 1.3E-19 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 Gene3D G3DSA:3.30.70.790 72 152 3.9E-31 T 28-03-2018 CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 Hamap MF_00822 Urease accessory protein UreE [ureE]. 2 139 23.33 T 28-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 Pfam PF05194 UreE urease accessory protein, C-terminal domain 72 152 1.2E-27 T 28-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 SUPERFAMILY SSF69737 72 138 2.62E-21 T 28-03-2018 IPR007864 Urease accessory protein UreE, C-terminal domain GO:0006461|GO:0016151|GO:0019627 CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 Gene3D G3DSA:2.60.260.20 1 71 2.6E-20 T 28-03-2018 CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 PIRSF PIRSF036402 3 152 7.7E-46 T 28-03-2018 IPR012406 Urease accessory protein UreE GO:0005737|GO:0006457|GO:0016151|GO:0018307 CI104_RS03695 2d193b45c46c05217ed67e28cca0c316 152 SUPERFAMILY SSF69287 1 69 3.14E-17 T 28-03-2018 IPR004029 UreE urease accessory, N-terminal CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 14 313 1.5E-102 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 ProSitePatterns PS01054 Transaldolase signature 1. 31 39 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 Gene3D G3DSA:3.20.20.70 2 316 6.9E-125 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 SUPERFAMILY SSF51569 1 316 4.08E-118 T 28-03-2018 CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 TIGRFAM TIGR00874 talAB: transaldolase 4 316 1.0E-165 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 ProSitePatterns PS00958 Transaldolase active site. 129 146 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS04490 fc2d2cee1b0a010074893e084e6f33bc 317 Hamap MF_00492 Transaldolase [tal]. 2 317 52.222 T 28-03-2018 IPR004730 Transaldolase type 1 GO:0004801|GO:0005737|GO:0006098 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS18275 54eb10272434f3e98c14f901d14c2a01 95 Gene3D G3DSA:2.40.50.220 2 95 1.5E-32 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS18275 54eb10272434f3e98c14f901d14c2a01 95 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 83 1.8E-29 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS18275 54eb10272434f3e98c14f901d14c2a01 95 SUPERFAMILY SSF159133 1 94 1.44E-30 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS18275 54eb10272434f3e98c14f901d14c2a01 95 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 83 1.0E-35 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS06220 22ce1305930168d69cf13bab65c50ab0 356 TIGRFAM TIGR00113 queA: S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1 344 2.0E-168 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CI104_RS06220 22ce1305930168d69cf13bab65c50ab0 356 Gene3D G3DSA:3.40.1780.10 1 137 1.8E-30 T 28-03-2018 CI104_RS06220 22ce1305930168d69cf13bab65c50ab0 356 Gene3D G3DSA:3.40.1780.10 175 344 1.6E-66 T 28-03-2018 CI104_RS06220 22ce1305930168d69cf13bab65c50ab0 356 SUPERFAMILY SSF111337 1 343 5.89E-138 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CI104_RS06220 22ce1305930168d69cf13bab65c50ab0 356 Pfam PF02547 Queuosine biosynthesis protein 4 343 1.9E-132 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CI104_RS06220 22ce1305930168d69cf13bab65c50ab0 356 Hamap MF_00113 S-adenosylmethionine:tRNA ribosyltransferase-isomerase [queA]. 1 344 47.651 T 28-03-2018 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA GO:0008616|GO:0016740|GO:0016853 MetaCyc: PWY-6700 CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 18 77 1.4E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 Pfam PF07729 FCD domain 108 225 1.7E-19 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 Gene3D G3DSA:1.10.10.10 2 79 2.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 Gene3D G3DSA:1.20.120.530 94 231 3.2E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 SUPERFAMILY SSF48008 105 225 1.44E-19 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 37 51 1.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 51 67 1.5E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 SMART SM00345 18 77 1.1E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 SMART SM00895 106 227 2.9E-15 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS25070 1d144db9dd143569f7ef0c8299674e95 239 SUPERFAMILY SSF46785 10 81 1.74E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 TIGRFAM TIGR02414 pepN_proteo: aminopeptidase N 12 869 0.0 T 28-03-2018 IPR012779 Peptidase M1, alanyl aminopeptidase GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 Gene3D G3DSA:2.60.40.1730 15 194 6.1E-30 T 28-03-2018 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 Gene3D G3DSA:1.25.50.10 546 870 1.5E-122 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 SUPERFAMILY SSF55486 204 450 2.01E-75 T 28-03-2018 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 Pfam PF11940 Domain of unknown function (DUF3458) Ig-like fold 444 545 1.2E-31 T 28-03-2018 IPR035414 Peptidase M1, alanyl aminopeptidase, Ig-like fold CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 Pfam PF17432 Domain of unknown function (DUF3458_C) ARM repeats 548 870 1.4E-118 T 28-03-2018 IPR024601 Peptidase M1, alanyl aminopeptidase, C-terminal CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 Pfam PF01433 Peptidase family M1 domain 208 439 4.0E-60 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 258 268 1.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 176 191 1.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 313 325 1.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 294 309 1.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 PRINTS PR00756 Membrane alanyl dipeptidase (M1) family signature 126 141 1.1E-8 T 28-03-2018 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal GO:0008237|GO:0008270 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 SUPERFAMILY SSF63737 1 193 2.48E-46 T 28-03-2018 CI104_RS09160 54d8ca94966f09b8f7c4f09c8b3ef36d 870 Gene3D G3DSA:1.10.390.10 280 443 8.7E-52 T 28-03-2018 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 SUPERFAMILY SSF52279 395 464 5.1E-59 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 SUPERFAMILY SSF52279 495 651 5.1E-59 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 46 352 5.8E-100 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 Gene3D G3DSA:3.40.50.1700 380 648 3.4E-86 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 Gene3D G3DSA:2.60.40.10 649 764 1.9E-33 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 SMART SM01217 685 754 1.0E-30 T 28-03-2018 IPR026891 Fibronectin type III-like domain CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 273 290 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 Gene3D G3DSA:3.20.20.300 32 375 3.6E-102 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 120 139 8.0E-22 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 166 182 8.0E-22 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 203 219 8.0E-22 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 101 117 8.0E-22 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 PRINTS PR00133 Glycosyl hydrolase family 3 signature 273 291 8.0E-22 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 SUPERFAMILY SSF51445 34 394 4.42E-97 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 Pfam PF01915 Glycosyl hydrolase family 3 C-terminal domain 395 648 3.4E-62 T 28-03-2018 IPR002772 Glycoside hydrolase family 3 C-terminal domain GO:0004553|GO:0005975 CI104_RS16760 5738e90aa7f3f13d0790faa3a7611e58 765 Pfam PF14310 Fibronectin type III-like domain 686 753 2.9E-22 T 28-03-2018 IPR026891 Fibronectin type III-like domain CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 Gene3D G3DSA:3.30.420.40 2 186 1.3E-34 T 28-03-2018 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 SMART SM00842 10 196 3.0E-96 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 TIGRFAM TIGR01174 ftsA: cell division protein FtsA 9 385 2.6E-161 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 Hamap MF_02033 Cell division protein FtsA [ftsA]. 6 420 29.547 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 Pfam PF14450 Cell division protein FtsA 207 381 8.9E-25 T 28-03-2018 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 Pfam PF02491 SHS2 domain inserted in FTSA 85 162 5.3E-30 T 28-03-2018 IPR003494 SHS2 domain inserted in FtsA GO:0005515|GO:0007049 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 Gene3D G3DSA:3.30.420.40 197 247 1.8E-6 T 28-03-2018 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 Gene3D G3DSA:3.90.640.10 248 300 3.9E-19 T 28-03-2018 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 PIRSF PIRSF003101 2 420 1.7E-152 T 28-03-2018 IPR020823 Cell division protein FtsA GO:0007049 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 SUPERFAMILY SSF53067 8 221 6.15E-61 T 28-03-2018 CI104_RS04920 e64b4c537ba827d8bf6fde7da46e6287 420 SUPERFAMILY SSF53067 198 384 1.91E-47 T 28-03-2018 CI104_RS04015 92945981282d928101086082b422dca0 95 ProDom PD065638 YGHW CYTOPLASMIC STY3323 1 94 2.0E-44 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 CI104_RS04015 92945981282d928101086082b422dca0 95 Pfam PF11115 Protein of unknown function (DUF2623) 1 92 6.1E-46 T 28-03-2018 IPR022574 Protein of unknown function DUF2623 CI104_RS23440 cba9ad72b715e24ca7c4469a0a587a6f 136 Pfam PF06146 Phosphate-starvation-inducible E 63 123 1.7E-16 T 28-03-2018 IPR020948 Phosphate-starvation-induced PsiE-like CI104_RS23440 cba9ad72b715e24ca7c4469a0a587a6f 136 PIRSF PIRSF029598 1 136 9.7E-53 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CI104_RS23440 cba9ad72b715e24ca7c4469a0a587a6f 136 Hamap MF_01048 Protein PsiE [psiE]. 3 136 25.322 T 28-03-2018 IPR009315 Phosphate-starvation-induced PsiE GO:0016021|GO:0016036 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 TIGRFAM TIGR01164 rplP_bact: ribosomal protein uL16 2 126 2.4E-58 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 Gene3D G3DSA:3.90.1170.10 1 136 5.2E-50 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 ProSitePatterns PS00701 Ribosomal protein L16 signature 2. 81 92 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 Pfam PF00252 Ribosomal protein L16p/L10e 4 131 1.7E-46 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 Hamap MF_01342 50S ribosomal protein L16 [rplP]. 1 133 37.894 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 ProSitePatterns PS00586 Ribosomal protein L16 signature 1. 58 69 - T 28-03-2018 IPR020798 Ribosomal protein L16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 87 116 9.6E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 23 35 9.6E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 57 86 9.6E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 PRINTS PR00060 Ribosomal protein L16 signature 41 52 9.6E-40 T 28-03-2018 IPR000114 Ribosomal protein L16 GO:0003735|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02080 9ca18dc7b9b89f80a362850de52e64fc 136 SUPERFAMILY SSF54686 3 133 3.27E-54 T 28-03-2018 IPR016180 Ribosomal protein L10e/L16 GO:0003735|GO:0005840|GO:0006412 CI104_RS27240 6d112ea62d945006a31ca131b0568cba 236 SMART SM00382 34 231 8.0E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS27240 6d112ea62d945006a31ca131b0568cba 236 SUPERFAMILY SSF52540 6 229 6.82E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27240 6d112ea62d945006a31ca131b0568cba 236 Pfam PF00005 ABC transporter 25 176 3.1E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS27240 6d112ea62d945006a31ca131b0568cba 236 Gene3D G3DSA:3.40.50.300 1 235 3.3E-58 T 28-03-2018 CI104_RS27240 6d112ea62d945006a31ca131b0568cba 236 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS02440 a85e6309c2883d34a6d901a20e1a77d5 334 Gene3D G3DSA:3.90.420.10 64 334 9.5E-63 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CI104_RS02440 a85e6309c2883d34a6d901a20e1a77d5 334 Hamap MF_01206 Protein-methionine-sulfoxide reductase catalytic subunit MsrP [msrP]. 5 334 54.342 T 28-03-2018 IPR022867 Protein-methionine-sulfoxide reductase subunit MsrP GO:0016667|GO:0030091|GO:0043546|GO:0055114 CI104_RS02440 a85e6309c2883d34a6d901a20e1a77d5 334 SUPERFAMILY SSF56524 75 330 2.35E-92 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CI104_RS02440 a85e6309c2883d34a6d901a20e1a77d5 334 Pfam PF00174 Oxidoreductase molybdopterin binding domain 108 267 8.6E-29 T 28-03-2018 IPR000572 Oxidoreductase, molybdopterin-binding domain GO:0042128 Reactome: R-HSA-1614517 CI104_RS05185 e5d89d236db2a397afd14e83ed47bb4e 176 SUPERFAMILY SSF55144 5 174 3.66E-45 T 28-03-2018 IPR009097 Cyclic phosphodiesterase CI104_RS05185 e5d89d236db2a397afd14e83ed47bb4e 176 Gene3D G3DSA:3.90.1140.10 1 176 2.3E-30 T 28-03-2018 CI104_RS05185 e5d89d236db2a397afd14e83ed47bb4e 176 Hamap MF_01940 RNA 2',3'-cyclic phosphodiesterase [thpR]. 5 174 21.798 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CI104_RS05185 e5d89d236db2a397afd14e83ed47bb4e 176 TIGRFAM TIGR02258 2_5_ligase: 2'-5' RNA ligase 6 174 1.4E-39 T 28-03-2018 IPR004175 RNA 2',3'-cyclic phosphodiesterase GO:0004113|GO:0008664 CI104_RS05185 e5d89d236db2a397afd14e83ed47bb4e 176 Pfam PF02834 LigT like Phosphoesterase 11 89 2.6E-12 T 28-03-2018 IPR014051 Phosphoesterase, HXTX CI104_RS05185 e5d89d236db2a397afd14e83ed47bb4e 176 Pfam PF02834 LigT like Phosphoesterase 93 166 1.1E-6 T 28-03-2018 IPR014051 Phosphoesterase, HXTX CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 SUPERFAMILY SSF48557 3 456 2.83E-141 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 Hamap MF_00006 Argininosuccinate lyase [argH]. 2 454 41.332 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00149 Fumarate lyase superfamily signature 103 121 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00149 Fumarate lyase superfamily signature 232 259 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00149 Fumarate lyase superfamily signature 148 166 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00149 Fumarate lyase superfamily signature 276 292 2.9E-28 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 Gene3D G3DSA:1.10.275.10 2 107 5.1E-32 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 Pfam PF00206 Lyase 6 301 1.5E-99 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 ProSitePatterns PS00163 Fumarate lyases signature. 276 285 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00145 Argininosuccinate lyase family signature 102 124 1.7E-67 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00145 Argininosuccinate lyase family signature 232 256 1.7E-67 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00145 Argininosuccinate lyase family signature 143 163 1.7E-67 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00145 Argininosuccinate lyase family signature 311 330 1.7E-67 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00145 Argininosuccinate lyase family signature 194 210 1.7E-67 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 PRINTS PR00145 Argininosuccinate lyase family signature 276 292 1.7E-67 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 Gene3D G3DSA:1.20.200.10 108 375 1.3E-95 T 28-03-2018 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 Pfam PF14698 Argininosuccinate lyase C-terminal 364 431 6.3E-24 T 28-03-2018 IPR029419 Argininosuccinate lyase, C-terminal KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 TIGRFAM TIGR00838 argH: argininosuccinate lyase 3 456 2.1E-214 T 28-03-2018 IPR009049 Argininosuccinate lyase GO:0004056|GO:0042450 KEGG: 00220+4.3.2.1|KEGG: 00250+4.3.2.1|MetaCyc: PWY-4983|MetaCyc: PWY-4984|MetaCyc: PWY-5|MetaCyc: PWY-5154|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS23955 1fbe661d365163880d3efdcebedc28b8 457 Gene3D G3DSA:1.10.40.30 376 433 6.7E-26 T 28-03-2018 CI104_RS26405 d921872a20492f26a60cfa3d808a21e6 88 SUPERFAMILY SSF63592 7 86 3.14E-19 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS26405 d921872a20492f26a60cfa3d808a21e6 88 Pfam PF05247 Flagellar transcriptional activator (FlhD) 6 84 5.9E-20 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS26405 d921872a20492f26a60cfa3d808a21e6 88 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 12 84 2.0E-13 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS26405 d921872a20492f26a60cfa3d808a21e6 88 Gene3D G3DSA:1.10.4000.10 6 80 1.0E-19 T 28-03-2018 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Gene3D G3DSA:3.40.50.720 9 126 1.3E-30 T 28-03-2018 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 SUPERFAMILY SSF52210 287 447 3.53E-37 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Pfam PF13549 ATP-grasp domain 472 694 9.9E-73 T 28-03-2018 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Pfam PF13607 Succinyl-CoA ligase like flavodoxin domain 147 280 4.6E-46 T 28-03-2018 IPR032875 Succinyl-CoA synthetase-like, flavodoxin domain CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 SMART SM00881 9 104 4.8E-23 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Pfam PF13380 CoA binding domain 13 129 5.5E-22 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Gene3D G3DSA:3.30.470.20 562 696 8.6E-23 T 28-03-2018 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Pfam PF00583 Acetyltransferase (GNAT) family 759 863 7.4E-9 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Gene3D G3DSA:3.40.630.30 716 886 5.9E-24 T 28-03-2018 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Gene3D G3DSA:3.40.50.261 127 284 1.4E-39 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Gene3D G3DSA:3.30.1490.20 500 561 2.2E-25 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 SUPERFAMILY SSF55729 615 866 1.03E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 SUPERFAMILY SSF51735 2 136 1.02E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 Gene3D G3DSA:3.40.50.261 285 452 4.6E-33 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 SUPERFAMILY SSF52210 125 286 1.23E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS18900 ed0f8692d3d833c15720262369035c52 886 SUPERFAMILY SSF56059 481 686 1.62E-25 T 28-03-2018 CI104_RS16890 83731100612e554bca202671b92c0c69 222 TIGRFAM TIGR00063 folE: GTP cyclohydrolase I 40 220 2.9E-86 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CI104_RS16890 83731100612e554bca202671b92c0c69 222 ProSitePatterns PS00859 GTP cyclohydrolase I signature 1. 98 114 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CI104_RS16890 83731100612e554bca202671b92c0c69 222 SUPERFAMILY SSF55620 4 221 3.71E-77 T 28-03-2018 CI104_RS16890 83731100612e554bca202671b92c0c69 222 Pfam PF01227 GTP cyclohydrolase I 41 218 2.1E-63 T 28-03-2018 IPR020602 GTP cyclohydrolase I domain KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CI104_RS16890 83731100612e554bca202671b92c0c69 222 Gene3D G3DSA:1.10.286.10 7 85 6.3E-21 T 28-03-2018 CI104_RS16890 83731100612e554bca202671b92c0c69 222 Hamap MF_00223 GTP cyclohydrolase 1 [folE]. 36 219 33.906 T 28-03-2018 IPR001474 GTP cyclohydrolase I GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CI104_RS16890 83731100612e554bca202671b92c0c69 222 Gene3D G3DSA:3.30.1130.10 89 221 9.9E-47 T 28-03-2018 CI104_RS16890 83731100612e554bca202671b92c0c69 222 ProSitePatterns PS00860 GTP cyclohydrolase I signature 2. 146 156 - T 28-03-2018 IPR018234 GTP cyclohydrolase I, conserved site GO:0003934|GO:0005737|GO:0046654 KEGG: 00790+3.5.4.16|MetaCyc: PWY-5663|MetaCyc: PWY-5664|MetaCyc: PWY-6147|MetaCyc: PWY-6703|MetaCyc: PWY-6983|MetaCyc: PWY-7442|MetaCyc: PWY-7852|Reactome: R-HSA-1474151 CI104_RS22340 b7623d9e4cc7622bb909818c2a2bf5ba 68 Pfam PF06526 Protein of unknown function (DUF1107) 1 63 2.1E-30 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 CI104_RS22340 b7623d9e4cc7622bb909818c2a2bf5ba 68 ProDom PD055267 YTFK Y0656 CYTOPLASMIC VP2585 VV0426 ESCHERICHIA S4534 VC2473 YPO3527 COLI 1 63 2.0E-29 T 28-03-2018 IPR009491 Protein of unknown function DUF1107 CI104_RS22340 b7623d9e4cc7622bb909818c2a2bf5ba 68 Gene3D G3DSA:3.30.1910.10 1 62 8.9E-32 T 28-03-2018 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 ProSitePatterns PS00211 ABC transporters family signature. 426 440 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 SUPERFAMILY SSF52540 275 525 1.66E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 SUPERFAMILY SSF52540 5 256 1.78E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 264 3.4E-4 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 SMART SM00382 311 502 1.7E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 SMART SM00382 34 234 2.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 Pfam PF00005 ABC transporter 303 454 1.8E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 Pfam PF00005 ABC transporter 26 184 1.0E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 Gene3D G3DSA:3.40.50.300 2 266 3.5E-67 T 28-03-2018 CI104_RS17035 006936eab574c1d0a275af4500b2000d 529 Gene3D G3DSA:3.40.50.300 272 528 5.2E-73 T 28-03-2018 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 Gene3D G3DSA:1.10.260.40 10 62 2.6E-17 T 28-03-2018 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 Gene3D G3DSA:3.40.50.2300 184 320 1.8E-47 T 28-03-2018 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 12 30 - T 28-03-2018 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 Gene3D G3DSA:3.40.50.2300 63 183 7.3E-28 T 28-03-2018 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 SMART SM00354 9 79 3.6E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 Pfam PF13377 Periplasmic binding protein-like domain 176 337 7.5E-44 T 28-03-2018 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 11 56 2.4E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 SUPERFAMILY SSF47413 10 67 9.38E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS24095 78de482f3086df7249a7485a105649fa 341 SUPERFAMILY SSF53822 68 338 1.32E-90 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS22035 e8f48b907617f940bec8aaea73928ab2 366 SUPERFAMILY SSF48695 5 175 1.6E-45 T 28-03-2018 IPR011031 Multihaem cytochrome CI104_RS22035 e8f48b907617f940bec8aaea73928ab2 366 PIRSF PIRSF000014 1 366 4.3E-141 T 28-03-2018 IPR009154 Membrane-bound tetrahaem cytochrome TorC/YecK GO:0005506|GO:0009055|GO:0009276|GO:0016021|GO:0020037 CI104_RS22035 e8f48b907617f940bec8aaea73928ab2 366 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 4 174 3.1E-68 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CI104_RS22035 e8f48b907617f940bec8aaea73928ab2 366 Gene3D G3DSA:3.90.10.10 36 364 2.8E-30 T 28-03-2018 CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 Gene3D G3DSA:3.40.140.10 1 104 1.7E-15 T 28-03-2018 CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 Gene3D G3DSA:3.90.1720.10 105 236 6.9E-14 T 28-03-2018 CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 Pfam PF14464 Prokaryotic homologs of the JAB domain 3 99 2.0E-17 T 28-03-2018 IPR028090 JAB domain, prokaryotic CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 SMART SM00232 1 124 1.3E-24 T 28-03-2018 IPR000555 JAB1/MPN/MOV34 metalloenzyme domain GO:0005515 CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 Pfam PF00877 NlpC/P60 family 117 231 7.5E-22 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 SUPERFAMILY SSF54001 112 233 6.38E-17 T 28-03-2018 CI104_RS11320 78518f17ff5c46f1d812483554b8a895 236 SUPERFAMILY SSF102712 2 102 4.05E-22 T 28-03-2018 CI104_RS15020 f0a91df5f9fdb0e74b0432098e3c60cf 241 SUPERFAMILY SSF52540 3 224 2.08E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15020 f0a91df5f9fdb0e74b0432098e3c60cf 241 ProSitePatterns PS00211 ABC transporters family signature. 139 153 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS15020 f0a91df5f9fdb0e74b0432098e3c60cf 241 SMART SM00382 28 215 9.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS15020 f0a91df5f9fdb0e74b0432098e3c60cf 241 Gene3D G3DSA:3.40.50.300 1 237 1.2E-73 T 28-03-2018 CI104_RS15020 f0a91df5f9fdb0e74b0432098e3c60cf 241 Pfam PF00005 ABC transporter 19 167 2.9E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS15020 f0a91df5f9fdb0e74b0432098e3c60cf 241 PIRSF PIRSF039085 1 241 3.4E-101 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 398 3.1E-136 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 Pfam PF00108 Thiolase, N-terminal domain 5 268 1.4E-74 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 ProSitePatterns PS00737 Thiolases signature 2. 346 362 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 PIRSF PIRSF000429 1 400 2.2E-132 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 Gene3D G3DSA:3.40.47.10 1 275 7.2E-54 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 SUPERFAMILY SSF53901 4 275 3.54E-79 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 Gene3D G3DSA:3.40.47.10 276 397 2.3E-32 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 Pfam PF02803 Thiolase, C-terminal domain 276 399 1.2E-44 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 86 104 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 TIGRFAM TIGR02430 pcaF: 3-oxoadipyl-CoA thiolase 3 400 2.8E-218 T 28-03-2018 IPR012793 Beta-ketoadipyl CoA thiolase GO:0016747|GO:0019619 KEGG: 00250+2.3.1.17|KEGG: 00360+2.3.1.174|KEGG: 00362+2.3.1.174|MetaCyc: PWY-1361|MetaCyc: PWY-2361|MetaCyc: PWY-6185 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 ProSitePatterns PS00099 Thiolases active site. 381 394 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CI104_RS13795 fd91a09068fbbdf4de004633defc0a01 400 SUPERFAMILY SSF53901 276 399 9.23E-46 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS23050 8cc098d0e3e42f4a622c6f571d790418 784 Pfam PF00350 Dynamin family 80 289 1.4E-18 T 28-03-2018 IPR022812 Dynamin superfamily CI104_RS23050 8cc098d0e3e42f4a622c6f571d790418 784 Gene3D G3DSA:3.40.50.300 57 608 4.1E-31 T 28-03-2018 CI104_RS23050 8cc098d0e3e42f4a622c6f571d790418 784 SUPERFAMILY SSF52540 215 357 3.0E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23050 8cc098d0e3e42f4a622c6f571d790418 784 SUPERFAMILY SSF52540 66 138 3.0E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12955 f6ad6a16ecf750360b8277b8ebed93fd 121 Gene3D G3DSA:3.10.180.10 12 120 5.3E-4 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS12955 f6ad6a16ecf750360b8277b8ebed93fd 121 SUPERFAMILY SSF54593 17 118 2.29E-7 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS15625 671f96d65d4bce0b1c0c605f27916c11 212 Pfam PF02502 Ribose/Galactose Isomerase 3 144 9.9E-29 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS15625 671f96d65d4bce0b1c0c605f27916c11 212 Pfam PF12408 Ribose-5-phosphate isomerase 164 210 2.6E-21 T 28-03-2018 IPR022133 Ribose-5-phosphate isomerase, C-terminal CI104_RS15625 671f96d65d4bce0b1c0c605f27916c11 212 SUPERFAMILY SSF89623 1 161 2.22E-36 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS15625 671f96d65d4bce0b1c0c605f27916c11 212 Gene3D G3DSA:3.40.1400.10 1 212 1.2E-55 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 SUPERFAMILY SSF47979 95 151 1.57E-14 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 SMART SM00529 56 155 1.9E-40 T 28-03-2018 IPR022689 Iron dependent repressor GO:0003700|GO:0006355|GO:0046914 CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 Gene3D G3DSA:1.10.60.10 103 149 2.5E-21 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 Pfam PF02742 Iron dependent repressor, metal binding and dimerisation domain 95 149 2.2E-14 T 28-03-2018 IPR001367 Iron dependent repressor, metal binding and dimerisation domain GO:0046914|GO:0046983 CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 Gene3D G3DSA:1.10.10.10 25 102 1.0E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 Pfam PF01325 Iron dependent repressor, N-terminal DNA binding domain 38 92 3.5E-9 T 28-03-2018 IPR022687 DTXR-type HTH domain GO:0003677 CI104_RS08495 15791a3ced9af2d363b6e772bafc9b00 157 SUPERFAMILY SSF46785 49 117 2.57E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 SMART SM00342 187 270 8.7E-33 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 SUPERFAMILY SSF46689 170 221 2.69E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 Gene3D G3DSA:1.10.10.60 228 275 5.5E-14 T 28-03-2018 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 254 270 1.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 254 1.7E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 Hamap MF_01534 HTH-type transcriptional activator RhaS [rhaS]. 1 273 55.679 T 28-03-2018 IPR023609 Transcription regulator HTH, RhaS GO:0003700|GO:0006355|GO:0019299 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 SUPERFAMILY SSF46689 223 272 1.03E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 Gene3D G3DSA:2.60.120.280 14 162 4.6E-15 T 28-03-2018 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 SUPERFAMILY SSF51215 16 157 1.2E-13 T 28-03-2018 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 Pfam PF02311 AraC-like ligand binding domain 18 140 2.3E-21 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 Gene3D G3DSA:1.10.10.60 168 227 2.1E-13 T 28-03-2018 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 Pfam PF12833 Helix-turn-helix domain 193 271 5.1E-26 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS24265 568b900f7e9d3867c410cfce6151e6b2 278 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 224 266 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS05155 2a7b2faf501433aacde9f6c4fced4808 263 TIGRFAM TIGR00222 panB: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1 263 2.5E-124 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CI104_RS05155 2a7b2faf501433aacde9f6c4fced4808 263 PIRSF PIRSF000388 1 263 6.9E-96 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CI104_RS05155 2a7b2faf501433aacde9f6c4fced4808 263 Pfam PF02548 Ketopantoate hydroxymethyltransferase 4 257 3.6E-103 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CI104_RS05155 2a7b2faf501433aacde9f6c4fced4808 263 SUPERFAMILY SSF51621 4 262 7.33E-103 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS05155 2a7b2faf501433aacde9f6c4fced4808 263 Hamap MF_00156 3-methyl-2-oxobutanoate hydroxymethyltransferase [panB]. 4 262 41.702 T 28-03-2018 IPR003700 Ketopantoate hydroxymethyltransferase GO:0003864|GO:0015940 KEGG: 00770+2.1.2.11|MetaCyc: PWY-6654 CI104_RS05155 2a7b2faf501433aacde9f6c4fced4808 263 Gene3D G3DSA:3.20.20.60 1 262 2.2E-82 T 28-03-2018 CI104_RS22280 410215c9fbf0fc87460b1118c3badbe5 176 Hamap MF_00209 Inorganic pyrophosphatase [ppa]. 14 174 36.979 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CI104_RS22280 410215c9fbf0fc87460b1118c3badbe5 176 Pfam PF00719 Inorganic pyrophosphatase 18 172 4.2E-55 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CI104_RS22280 410215c9fbf0fc87460b1118c3badbe5 176 Gene3D G3DSA:3.90.80.10 3 176 7.6E-54 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CI104_RS22280 410215c9fbf0fc87460b1118c3badbe5 176 SUPERFAMILY SSF50324 4 173 3.92E-67 T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CI104_RS22280 410215c9fbf0fc87460b1118c3badbe5 176 ProSitePatterns PS00387 Inorganic pyrophosphatase signature. 66 72 - T 28-03-2018 IPR008162 Inorganic pyrophosphatase GO:0000287|GO:0004427|GO:0005737|GO:0006796 KEGG: 00190+3.6.1.1|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-71737 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Pfam PF09312 SurA N-terminal domain 25 142 4.7E-47 T 28-03-2018 IPR015391 SurA N-terminal CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 SUPERFAMILY SSF109998 25 200 7.46E-44 T 28-03-2018 IPR027304 Trigger factor/SurA domain CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Pfam PF00639 PPIC-type PPIASE domain 289 380 4.5E-25 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Pfam PF00639 PPIC-type PPIASE domain 178 272 1.8E-21 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 321 342 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Gene3D G3DSA:1.10.4030.10 21 148 1.1E-25 T 28-03-2018 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Gene3D G3DSA:3.10.50.40 279 386 3.5E-31 T 28-03-2018 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Hamap MF_01183 Chaperone SurA [surA]. 9 428 34.298 T 28-03-2018 IPR023034 Peptidyl-prolyl isomerase SurA GO:0003755|GO:0006457|GO:0030288|GO:0042277|GO:0042710|GO:0043165|GO:0050821|GO:0051082|GO:0051085|GO:0060274 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 Gene3D G3DSA:3.10.50.40 163 278 7.1E-24 T 28-03-2018 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 SUPERFAMILY SSF54534 173 275 2.22E-28 T 28-03-2018 CI104_RS04730 ff31ed8c23597187f8730eda3c7569e4 428 SUPERFAMILY SSF54534 283 385 1.18E-31 T 28-03-2018 CI104_RS21355 08fb35089664ecada1394ba42b763af8 423 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 23 422 9.4E-119 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CI104_RS21355 08fb35089664ecada1394ba42b763af8 423 PIRSF PIRSF006066 1 423 2.1E-122 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CI104_RS21355 08fb35089664ecada1394ba42b763af8 423 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 9 418 2.4E-107 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CI104_RS23570 57684bc7d07453de0a6cb08a12909f80 270 Gene3D G3DSA:3.40.50.10860 18 114 1.1E-30 T 28-03-2018 CI104_RS23570 57684bc7d07453de0a6cb08a12909f80 270 Pfam PF01488 Shikimate / quinate 5-dehydrogenase 119 165 2.2E-5 T 28-03-2018 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CI104_RS23570 57684bc7d07453de0a6cb08a12909f80 270 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 23 90 1.1E-17 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CI104_RS23570 57684bc7d07453de0a6cb08a12909f80 270 SUPERFAMILY SSF51735 103 264 1.05E-35 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS23570 57684bc7d07453de0a6cb08a12909f80 270 SUPERFAMILY SSF53223 3 102 4.89E-29 T 28-03-2018 CI104_RS23570 57684bc7d07453de0a6cb08a12909f80 270 Gene3D G3DSA:3.40.50.720 115 269 1.6E-30 T 28-03-2018 CI104_RS02325 f39c8fac61c1c47bfb44c9156e107ed0 387 Gene3D G3DSA:1.20.1600.10 2 314 1.6E-31 T 28-03-2018 CI104_RS02325 f39c8fac61c1c47bfb44c9156e107ed0 387 SUPERFAMILY SSF111369 51 299 2.62E-88 T 28-03-2018 CI104_RS02325 f39c8fac61c1c47bfb44c9156e107ed0 387 Pfam PF00529 HlyD membrane-fusion protein of T1SS 146 359 4.3E-11 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS02325 f39c8fac61c1c47bfb44c9156e107ed0 387 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 374 7.0E-84 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS02325 f39c8fac61c1c47bfb44c9156e107ed0 387 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 63 292 1.3E-14 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 ProSitePatterns PS00892 HIT domain signature. 88 106 - T 28-03-2018 IPR019808 Histidine triad, conserved site CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 Pfam PF01230 HIT domain 12 109 1.9E-30 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 Gene3D G3DSA:3.30.428.10 2 112 8.6E-30 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 SUPERFAMILY SSF54197 3 113 1.25E-35 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 PRINTS PR00332 Histidine triad family signature 6 22 6.0E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 PRINTS PR00332 Histidine triad family signature 95 105 6.0E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CI104_RS10585 58a59ad28ab6a1b4de6d317a40c59f56 119 PRINTS PR00332 Histidine triad family signature 27 45 6.0E-20 T 28-03-2018 IPR001310 Histidine triad (HIT) protein CI104_RS04530 23acf4914357f2ef601404ea102294e4 87 Hamap MF_00500 30S ribosomal protein S20 [rpsT]. 1 85 17.083 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS04530 23acf4914357f2ef601404ea102294e4 87 Pfam PF01649 Ribosomal protein S20 2 84 5.9E-27 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS04530 23acf4914357f2ef601404ea102294e4 87 TIGRFAM TIGR00029 S20: ribosomal protein bS20 1 87 8.8E-34 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS04530 23acf4914357f2ef601404ea102294e4 87 ProDom PD004231 RIBOSOMAL S20 30S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN S20P SUBUNIT CHLOROPLAST DIRECT 13 86 8.0E-36 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS04530 23acf4914357f2ef601404ea102294e4 87 Gene3D G3DSA:1.20.58.110 1 87 1.0E-28 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS04530 23acf4914357f2ef601404ea102294e4 87 SUPERFAMILY SSF46992 3 86 5.62E-31 T 28-03-2018 IPR002583 Ribosomal protein S20 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS10240 ef4b61552fa4d8c50f615a640e27801b 138 Pfam PF10614 Type VIII secretion system (T8SS), CsgF protein 6 129 1.5E-36 T 28-03-2018 IPR018893 Type VIII secretion system, CsgF CI104_RS07620 01057e549820553d465ec705a049f4ae 361 Gene3D G3DSA:3.40.50.300 127 334 6.0E-28 T 28-03-2018 CI104_RS07620 01057e549820553d465ec705a049f4ae 361 SUPERFAMILY SSF52540 130 331 1.36E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07620 01057e549820553d465ec705a049f4ae 361 Pfam PF02562 PhoH-like protein 131 334 1.8E-95 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 SUPERFAMILY SSF109998 203 240 2.62E-37 T 28-03-2018 IPR027304 Trigger factor/SurA domain CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 SUPERFAMILY SSF109998 39 169 2.62E-37 T 28-03-2018 IPR027304 Trigger factor/SurA domain CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 Pfam PF13145 PPIC-type PPIASE domain 247 369 5.8E-22 T 28-03-2018 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type GO:0016853 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 Gene3D G3DSA:3.10.50.40 383 496 5.2E-8 T 28-03-2018 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 Gene3D G3DSA:3.10.50.40 232 381 1.2E-31 T 28-03-2018 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 Pfam PF13624 SurA N-terminal domain 1 165 6.2E-54 T 28-03-2018 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 SUPERFAMILY SSF54534 225 355 8.5E-22 T 28-03-2018 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 ProSitePatterns PS01096 PpiC-type peptidyl-prolyl cis-trans isomerase signature. 295 316 - T 28-03-2018 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site Reactome: R-HSA-1169408|Reactome: R-HSA-6804756|Reactome: R-HSA-6811555|Reactome: R-HSA-936440 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 Gene3D G3DSA:1.10.4030.10 179 231 0.0028 T 28-03-2018 CI104_RS06440 b8c42057bf2972bb9183d85c3902fd16 624 Gene3D G3DSA:1.10.4030.10 38 170 8.5E-25 T 28-03-2018 CI104_RS17365 17eec6b3ba00ad44683e6a19a1bf517b 429 SUPERFAMILY SSF103473 10 416 1.26E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS17365 17eec6b3ba00ad44683e6a19a1bf517b 429 Gene3D G3DSA:1.20.1250.20 225 425 2.3E-19 T 28-03-2018 CI104_RS17365 17eec6b3ba00ad44683e6a19a1bf517b 429 Gene3D G3DSA:1.20.1250.20 5 215 9.3E-35 T 28-03-2018 CI104_RS17365 17eec6b3ba00ad44683e6a19a1bf517b 429 Pfam PF07690 Major Facilitator Superfamily 23 381 3.1E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 SMART SM00422 4 73 3.2E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.0E-12 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 Gene3D G3DSA:1.10.1660.10 1 119 5.9E-19 T 28-03-2018 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 SUPERFAMILY SSF46955 4 109 3.63E-17 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 3.9E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 3.9E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 3.9E-14 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS28655 b7412a53294495e3dcd41fa330e79505 120 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 115 1.1E-57 T 28-03-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 CI104_RS04960 02cfe479246de7bfdaf26feeff4a37c0 206 TIGRFAM TIGR00152 TIGR00152: dephospho-CoA kinase 5 189 3.1E-67 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CI104_RS04960 02cfe479246de7bfdaf26feeff4a37c0 206 SUPERFAMILY SSF52540 1 190 2.13E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04960 02cfe479246de7bfdaf26feeff4a37c0 206 Pfam PF01121 Dephospho-CoA kinase 4 177 1.9E-74 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CI104_RS04960 02cfe479246de7bfdaf26feeff4a37c0 206 Gene3D G3DSA:3.40.50.300 1 206 6.6E-45 T 28-03-2018 CI104_RS04960 02cfe479246de7bfdaf26feeff4a37c0 206 Hamap MF_00376 Dephospho-CoA kinase [coaE]. 2 196 27.481 T 28-03-2018 IPR001977 Dephospho-CoA kinase GO:0004140|GO:0005524|GO:0015937 KEGG: 00770+2.7.1.24|MetaCyc: PWY-7851 CI104_RS05135 e1e6e9c5bbe4b068f5bc8088cf3f6607 146 SUPERFAMILY SSF53062 1 125 1.96E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS05135 e1e6e9c5bbe4b068f5bc8088cf3f6607 146 Pfam PF03610 PTS system fructose IIA component 3 116 1.8E-23 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS05135 e1e6e9c5bbe4b068f5bc8088cf3f6607 146 Gene3D G3DSA:3.40.50.510 1 136 1.4E-19 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Gene3D G3DSA:3.30.450.20 78 187 1.6E-13 T 28-03-2018 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Gene3D G3DSA:1.10.287.950 337 449 7.6E-14 T 28-03-2018 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Gene3D G3DSA:1.10.287.950 450 643 3.7E-44 T 28-03-2018 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 453 607 5.9E-46 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Gene3D G3DSA:3.30.450.20 188 317 2.2E-15 T 28-03-2018 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Pfam PF02743 Cache domain 48 265 2.6E-21 T 28-03-2018 IPR033479 Double Cache domain 1 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 415 444 4.4E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 569 598 4.4E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 521 550 4.4E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 315 335 4.4E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 492 519 4.4E-51 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 SMART SM00283 394 641 2.7E-72 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 SUPERFAMILY SSF58104 361 642 1.27E-67 T 28-03-2018 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 SMART SM00304 339 393 1.5E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS13060 0c615f2f93298ed13aa2b0c898b92b9f 643 Pfam PF00672 HAMP domain 339 388 6.3E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS01045 93e89c5fdd8e07ef9ab7a34fa5d9b6c8 250 Gene3D G3DSA:3.40.50.300 3 238 4.3E-25 T 28-03-2018 CI104_RS01045 93e89c5fdd8e07ef9ab7a34fa5d9b6c8 250 SUPERFAMILY SSF52540 3 235 2.19E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01045 93e89c5fdd8e07ef9ab7a34fa5d9b6c8 250 Pfam PF06564 Cellulose biosynthesis protein BcsQ 1 236 2.2E-105 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CI104_RS01045 93e89c5fdd8e07ef9ab7a34fa5d9b6c8 250 TIGRFAM TIGR03371 cellulose_yhjQ: cellulose synthase operon protein YhjQ 1 239 4.3E-82 T 28-03-2018 IPR017746 Cellulose synthase operon protein BcsQ CI104_RS07305 01e379f9dabe58dee65466d1f0ad9436 264 SUPERFAMILY SSF52540 8 233 5.32E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07305 01e379f9dabe58dee65466d1f0ad9436 264 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS07305 01e379f9dabe58dee65466d1f0ad9436 264 SMART SM00382 32 242 1.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS07305 01e379f9dabe58dee65466d1f0ad9436 264 Gene3D G3DSA:3.40.50.300 6 244 1.2E-58 T 28-03-2018 CI104_RS07305 01e379f9dabe58dee65466d1f0ad9436 264 Pfam PF00005 ABC transporter 24 171 2.0E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 Pfam PF07719 Tetratricopeptide repeat 96 129 5.3E-5 T 28-03-2018 IPR013105 Tetratricopeptide repeat 2 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 SUPERFAMILY SSF48452 27 283 8.68E-78 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 SMART SM00028 62 95 0.0033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 SMART SM00028 96 129 2.0E-4 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 SMART SM00028 234 267 15.0 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 PIRSF PIRSF004654 1 292 1.0E-120 T 28-03-2018 IPR023605 Lipoprotein NlpI CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 Pfam PF13181 Tetratricopeptide repeat 62 94 0.033 T 28-03-2018 IPR019734 Tetratricopeptide repeat GO:0005515 CI104_RS02920 0c9973b3fa5c2b0788ab022a6f686c5e 294 Gene3D G3DSA:1.25.40.10 20 294 3.0E-49 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS02685 b29437b0c27887a2dbc6c22a6b517239 163 SUPERFAMILY SSF55804 9 155 3.14E-42 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS02685 b29437b0c27887a2dbc6c22a6b517239 163 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 13 155 8.1E-37 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS02685 b29437b0c27887a2dbc6c22a6b517239 163 TIGRFAM TIGR01419 nitro_reg_IIA: PTS IIA-like nitrogen-regulatory protein PtsN 9 155 3.9E-63 T 28-03-2018 IPR006320 Phosphotransferase system, IIA-like nitrogen-regulatory protein PtsN GO:0008982|GO:0009401 CI104_RS02685 b29437b0c27887a2dbc6c22a6b517239 163 Gene3D G3DSA:3.40.930.10 8 157 3.8E-38 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS02685 b29437b0c27887a2dbc6c22a6b517239 163 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 58 74 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS13080 8c503a088ae3b1e09f7e158c5e843e59 516 PIRSF PIRSF002741 3 513 1.5E-108 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS13080 8c503a088ae3b1e09f7e158c5e843e59 516 Gene3D G3DSA:3.40.190.10 153 290 1.4E-40 T 28-03-2018 CI104_RS13080 8c503a088ae3b1e09f7e158c5e843e59 516 Gene3D G3DSA:3.10.105.10 291 487 2.2E-52 T 28-03-2018 CI104_RS13080 8c503a088ae3b1e09f7e158c5e843e59 516 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 77 432 1.1E-92 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS13080 8c503a088ae3b1e09f7e158c5e843e59 516 SUPERFAMILY SSF53850 30 507 9.57E-133 T 28-03-2018 CI104_RS13080 8c503a088ae3b1e09f7e158c5e843e59 516 Gene3D G3DSA:3.90.76.10 54 152 1.7E-26 T 28-03-2018 CI104_RS10605 23ec3a6cc226df69565d4e51da44d952 341 ProSitePatterns PS00775 Glycosyl hydrolases family 3 active site. 234 251 - T 28-03-2018 IPR019800 Glycoside hydrolase, family 3, active site GO:0004553|GO:0005975 CI104_RS10605 23ec3a6cc226df69565d4e51da44d952 341 Hamap MF_00364 Beta-hexosaminidase [nagZ]. 3 332 48.179 T 28-03-2018 IPR022956 Beta-hexosaminidase, bacterial GO:0004563 KEGG: 00511+3.2.1.52|KEGG: 00513+3.2.1.52|KEGG: 00520+3.2.1.52|KEGG: 00531+3.2.1.52|KEGG: 00603+3.2.1.52|KEGG: 00604+3.2.1.52|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CI104_RS10605 23ec3a6cc226df69565d4e51da44d952 341 Pfam PF00933 Glycosyl hydrolase family 3 N terminal domain 12 318 2.0E-99 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS10605 23ec3a6cc226df69565d4e51da44d952 341 Gene3D G3DSA:3.20.20.300 1 341 2.4E-80 T 28-03-2018 IPR001764 Glycoside hydrolase, family 3, N-terminal GO:0004553|GO:0005975 CI104_RS10605 23ec3a6cc226df69565d4e51da44d952 341 SUPERFAMILY SSF51445 3 317 1.47E-86 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS05845 98d26988ee4894634a89509d9a392529 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 77 88 2.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05845 98d26988ee4894634a89509d9a392529 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 67 77 2.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05845 98d26988ee4894634a89509d9a392529 331 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 56 67 2.6E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05845 98d26988ee4894634a89509d9a392529 331 SUPERFAMILY SSF46785 40 149 4.84E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05845 98d26988ee4894634a89509d9a392529 331 Gene3D G3DSA:3.40.190.10 129 213 1.9E-6 T 28-03-2018 CI104_RS05845 98d26988ee4894634a89509d9a392529 331 Gene3D G3DSA:1.10.10.10 29 124 8.6E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05845 98d26988ee4894634a89509d9a392529 331 Gene3D G3DSA:3.40.190.10 214 303 7.0E-24 T 28-03-2018 CI104_RS05845 98d26988ee4894634a89509d9a392529 331 Pfam PF03466 LysR substrate binding domain 126 329 3.0E-37 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS05845 98d26988ee4894634a89509d9a392529 331 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 41 100 2.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05845 98d26988ee4894634a89509d9a392529 331 SUPERFAMILY SSF53850 128 329 7.24E-40 T 28-03-2018 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 SMART SM00357 5 69 9.3E-31 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 SUPERFAMILY SSF50249 3 68 3.26E-26 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 42 60 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 27 36 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 PRINTS PR00050 Cold shock protein signature 6 21 1.1E-18 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 PIRSF PIRSF002599 1 69 8.7E-26 T 28-03-2018 IPR012156 Cold shock, CspA GO:0003676 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 Pfam PF00313 'Cold-shock' DNA-binding domain 5 68 3.0E-33 T 28-03-2018 IPR002059 Cold-shock protein, DNA-binding GO:0003677|GO:0006355 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 Gene3D G3DSA:2.40.50.140 4 69 7.0E-30 T 28-03-2018 CI104_RS15165 2438b21594d2be1ec72263acfe9ba76f 69 ProSitePatterns PS00352 'Cold-shock' domain signature. 17 36 - T 28-03-2018 IPR019844 Cold-shock conserved site CI104_RS01625 b70d5b4f74226a56543eef7c21349f68 219 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS01625 b70d5b4f74226a56543eef7c21349f68 219 Gene3D G3DSA:3.40.1080.10 1 219 3.9E-68 T 28-03-2018 CI104_RS01625 b70d5b4f74226a56543eef7c21349f68 219 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 7 214 3.9E-57 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CI104_RS01625 b70d5b4f74226a56543eef7c21349f68 219 SMART SM00882 5 216 4.3E-60 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS01625 b70d5b4f74226a56543eef7c21349f68 219 Pfam PF01144 Coenzyme A transferase 11 213 5.0E-65 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS01625 b70d5b4f74226a56543eef7c21349f68 219 SUPERFAMILY SSF100950 2 215 4.87E-71 T 28-03-2018 CI104_RS22275 9212e345470dfc2080852a9a5b40d8cb 318 SUPERFAMILY SSF53822 23 310 2.52E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS22275 9212e345470dfc2080852a9a5b40d8cb 318 Pfam PF13407 Periplasmic binding protein domain 26 274 4.1E-44 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS22275 9212e345470dfc2080852a9a5b40d8cb 318 Gene3D G3DSA:3.40.50.2300 142 301 3.6E-31 T 28-03-2018 CI104_RS22275 9212e345470dfc2080852a9a5b40d8cb 318 Gene3D G3DSA:3.40.50.2300 18 141 2.5E-21 T 28-03-2018 CI104_RS26180 584cb677046b881c50e9f33fd4b67e51 467 Gene3D G3DSA:1.10.10.10 7 72 7.2E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26180 584cb677046b881c50e9f33fd4b67e51 467 Pfam PF13518 Helix-turn-helix domain 16 66 1.3E-8 T 28-03-2018 CI104_RS26180 584cb677046b881c50e9f33fd4b67e51 467 SUPERFAMILY SSF53098 137 298 5.31E-14 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26180 584cb677046b881c50e9f33fd4b67e51 467 Gene3D G3DSA:3.30.420.10 137 309 1.5E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS26180 584cb677046b881c50e9f33fd4b67e51 467 SUPERFAMILY SSF46689 11 118 8.96E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 SUPERFAMILY SSF51556 51 316 4.33E-72 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 TIGRFAM TIGR03583 EF_0837: putative amidohydrolase, EF_0837/AHA_3915 family 3 364 5.6E-178 T 28-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 PIRSF PIRSF039004 1 375 3.0E-132 T 28-03-2018 IPR020043 Amidohydrolase EF0837/AHA3915, putative CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 Pfam PF01979 Amidohydrolase family 47 334 1.7E-8 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 Gene3D G3DSA:2.30.40.10 1 57 1.1E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 SUPERFAMILY SSF51338 1 59 3.05E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS22160 69e8ba838db3ef18a7a9e7e706377df9 377 Gene3D G3DSA:3.20.20.140 58 315 3.8E-46 T 28-03-2018 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 Gene3D G3DSA:3.40.190.10 176 260 1.0E-20 T 28-03-2018 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 SUPERFAMILY SSF53850 90 290 3.01E-45 T 28-03-2018 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 Pfam PF03466 LysR substrate binding domain 89 288 1.7E-47 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 SUPERFAMILY SSF46785 4 111 4.59E-25 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 Gene3D G3DSA:1.10.10.10 3 83 5.7E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 62 1.6E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 Gene3D G3DSA:3.40.190.10 88 175 8.2E-26 T 28-03-2018 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 8.1E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 8.1E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS17910 234079e5b85363d8226e82bb945b02db 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 8.1E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18895 c4ebbabe1452865257a653b18b7732ef 232 Pfam PF03942 DTW domain 30 211 1.2E-41 T 28-03-2018 IPR005636 DTW CI104_RS18895 c4ebbabe1452865257a653b18b7732ef 232 SMART SM01144 27 218 3.2E-69 T 28-03-2018 IPR005636 DTW CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 539 555 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 379 453 2.0E-9 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 Pfam PF02378 Phosphotransferase system, EIIC 17 277 5.1E-19 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 Gene3D G3DSA:3.40.50.2300 365 471 1.2E-20 T 28-03-2018 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 SUPERFAMILY SSF52794 377 466 5.23E-22 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 8 347 7.5E-188 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 Gene3D G3DSA:3.40.930.10 492 637 7.0E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 SUPERFAMILY SSF55804 496 634 4.06E-41 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS00720 2398a15605261e8a13edcc2727e03f02 637 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 498 634 2.8E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 SUPERFAMILY SSF103661 465 497 7.98E-13 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 Gene3D G3DSA:1.20.1250.20 242 488 2.9E-28 T 28-03-2018 CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 Gene3D G3DSA:1.20.1250.20 23 237 3.9E-23 T 28-03-2018 CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 33 431 6.2E-146 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 SUPERFAMILY SSF103473 24 440 3.4E-69 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 Pfam PF08946 Osmosensory transporter coiled coil 454 499 7.5E-23 T 28-03-2018 IPR015041 Osmosensory transporter coiled coil CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 ProSitePatterns PS00216 Sugar transport proteins signature 1. 315 332 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS23035 596af2ec6fb26b8ec7a878aedc5fd489 500 Pfam PF00083 Sugar (and other) transporter 28 448 2.1E-72 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS11275 a416c64dcef937b2b5c1ce8604461b7e 117 Pfam PF05354 Phage Head-Tail Attachment 2 117 6.2E-58 T 28-03-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 CI104_RS11275 a416c64dcef937b2b5c1ce8604461b7e 117 Gene3D G3DSA:2.40.10.180 1 117 8.8E-35 T 28-03-2018 CI104_RS11275 a416c64dcef937b2b5c1ce8604461b7e 117 ProDom PD031229 PROPHAGE HEAD-TAIL JOINING CAPSID TAIL ATTACHMENT MINOR GIFSY-1 FII CP-933X 1 117 1.0E-44 T 28-03-2018 IPR008018 Bacteriophage tail attachment protein FII GO:0019028|GO:0019068 CI104_RS11275 a416c64dcef937b2b5c1ce8604461b7e 117 SUPERFAMILY SSF69279 2 117 1.45E-50 T 28-03-2018 CI104_RS05025 edb0a74cf808dc28e149788baaefc91b 263 Pfam PF11453 Protein of unknown function (DUF2950) 20 262 5.6E-80 T 28-03-2018 IPR021556 Protein of unknown function DUF2950 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 Pfam PF00072 Response regulator receiver domain 4 112 1.3E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 Gene3D G3DSA:2.20.25.10 203 238 7.1E-10 T 28-03-2018 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 SUPERFAMILY SSF52172 1 123 3.27E-32 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 SMART SM00850 143 238 1.9E-26 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 Pfam PF04397 LytTr DNA-binding domain 144 237 3.2E-24 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 Gene3D G3DSA:3.40.50.2300 1 134 1.7E-30 T 28-03-2018 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 SMART SM00448 2 112 1.2E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS16720 9532867ade361c0aa83fed8ce0235196 239 Gene3D G3DSA:2.40.50.40 135 200 9.2E-7 T 28-03-2018 CI104_RS17330 8b30135866ace65752a3d2c354b251e8 358 SUPERFAMILY SSF51695 32 352 3.14E-95 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CI104_RS17330 8b30135866ace65752a3d2c354b251e8 358 Pfam PF03009 Glycerophosphoryl diester phosphodiesterase family 36 350 1.4E-75 T 28-03-2018 IPR030395 Glycerophosphodiester phosphodiesterase domain GO:0006629|GO:0008081 CI104_RS17330 8b30135866ace65752a3d2c354b251e8 358 Gene3D G3DSA:3.20.20.190 30 356 8.7E-65 T 28-03-2018 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain GO:0006629|GO:0008081 CI104_RS24245 3b06c6fb8692ed55556c788cde9d5d65 327 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 2.0E-116 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS24245 3b06c6fb8692ed55556c788cde9d5d65 327 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 41.2 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS24245 3b06c6fb8692ed55556c788cde9d5d65 327 Gene3D G3DSA:1.20.1640.10 250 322 1.7E-4 T 28-03-2018 CI104_RS24245 3b06c6fb8692ed55556c788cde9d5d65 327 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 314 1.4E-185 T 28-03-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS24245 3b06c6fb8692ed55556c788cde9d5d65 327 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 327 2.0E-129 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 SMART SM00419 201 249 2.8E-13 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 ProSitePatterns PS00042 Crp-type HTH domain signature. 209 232 - T 28-03-2018 IPR018335 Transcription regulator HTH, Crp-type, conserved site GO:0003700|GO:0005622|GO:0006355 CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 207 223 2.4E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 PRINTS PR00034 CRP bacterial regulatory protein HTH signature 223 238 2.4E-12 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 Gene3D G3DSA:2.60.120.10 38 179 2.2E-19 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 SUPERFAMILY SSF46785 179 259 2.19E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 SUPERFAMILY SSF51206 37 176 1.44E-31 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 SMART SM00100 44 165 2.9E-22 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 Pfam PF13545 Crp-like helix-turn-helix domain 182 254 8.1E-16 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 Pfam PF00027 Cyclic nucleotide-binding domain 65 146 1.1E-15 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS13825 2b5dd05080723300fc7531ea596d742c 264 Gene3D G3DSA:1.10.10.10 180 264 1.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26055 0bedcdab231fd0ce1b6d18868d615274 471 Pfam PF06122 Conjugative relaxosome accessory transposon protein 33 397 2.1E-60 T 28-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SUPERFAMILY SSF141868 894 1101 1.09E-21 T 28-03-2018 IPR001633 EAL domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 299 421 7.5E-30 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 553 676 1.1E-11 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00052 855 1099 3.7E-34 T 28-03-2018 IPR001633 EAL domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Gene3D G3DSA:3.20.20.450 864 1103 1.4E-24 T 28-03-2018 IPR001633 EAL domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SUPERFAMILY SSF55785 438 545 7.68E-14 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Pfam PF13426 PAS domain 314 415 1.3E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Pfam PF00563 EAL domain 889 1093 2.7E-22 T 28-03-2018 IPR001633 EAL domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Pfam PF08448 PAS fold 561 672 2.3E-10 T 28-03-2018 IPR013656 PAS fold-4 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Pfam PF08447 PAS fold 452 537 5.2E-9 T 28-03-2018 IPR013655 PAS fold-3 GO:0005515 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Pfam PF05231 MASE1 20 294 2.4E-37 T 28-03-2018 IPR007895 MASE1 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SUPERFAMILY SSF55785 295 414 1.55E-20 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Gene3D G3DSA:3.30.450.20 485 551 0.05 T 28-03-2018 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Gene3D G3DSA:3.30.450.20 552 687 2.0E-20 T 28-03-2018 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Gene3D G3DSA:3.30.450.20 287 437 4.7E-25 T 28-03-2018 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 680 842 5.4E-37 T 28-03-2018 IPR000160 GGDEF domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00091 302 368 4.2E-10 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00091 555 623 1.0E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00091 429 496 3.5 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00267 671 843 1.7E-61 T 28-03-2018 IPR000160 GGDEF domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00086 502 543 2.4E-5 T 28-03-2018 IPR001610 PAC motif CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00086 629 671 0.0021 T 28-03-2018 IPR001610 PAC motif CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SMART SM00086 375 417 3.6E-8 T 28-03-2018 IPR001610 PAC motif CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Gene3D G3DSA:3.30.450.20 439 484 1.6E-11 T 28-03-2018 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Pfam PF00990 Diguanylate cyclase, GGDEF domain 682 838 6.6E-43 T 28-03-2018 IPR000160 GGDEF domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 Gene3D G3DSA:3.30.70.270 688 851 3.6E-53 T 28-03-2018 CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SUPERFAMILY SSF55785 541 669 8.86E-18 T 28-03-2018 IPR000014 PAS domain CI104_RS16590 9b16a9c8807680a567adcba6464e0400 1109 SUPERFAMILY SSF55073 687 845 1.41E-45 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 Gene3D G3DSA:3.90.1150.10 243 376 1.6E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 371 5.3E-88 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 Hamap MF_02026 dTDP-4-amino-4,6-dideoxygalactose transaminase [wecE]. 1 376 79.356 T 28-03-2018 IPR032894 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE GO:0009246|GO:0019180 MetaCyc: PWY-7315 CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 SUPERFAMILY SSF53383 2 375 7.93E-102 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 PIRSF PIRSF000390 1 376 5.4E-122 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 TIGRFAM TIGR02379 ECA_wecE: TDP-4-keto-6-deoxy-D-glucose transaminase 1 375 2.5E-221 T 28-03-2018 IPR012749 dTDP-4-amino-4,6-dideoxygalactose transaminase WecE-like MetaCyc: PWY-7315 CI104_RS24890 dd2362b1ebcfedfea107c28afa06afcc 376 Gene3D G3DSA:3.40.640.10 1 242 8.7E-48 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS27810 d6ffcd6ee7e1ddc2dda0fc179980e536 176 Pfam PF03230 Antirestriction protein 88 176 3.4E-19 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS27810 d6ffcd6ee7e1ddc2dda0fc179980e536 176 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 60 176 7.0E-14 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 46 65 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 SUPERFAMILY SSF47729 1 90 1.35E-32 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 Pfam PF00216 Bacterial DNA-binding protein 1 90 6.3E-33 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 SMART SM00411 1 90 2.3E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 PRINTS PR01727 Prokaryotic integration host factor signature 74 88 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 PRINTS PR01727 Prokaryotic integration host factor signature 40 55 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 PRINTS PR01727 Prokaryotic integration host factor signature 58 71 2.0E-19 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS23685 1bb50092fec0dda32954ed0fac5a61aa 90 Gene3D G3DSA:4.10.520.10 1 90 1.2E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS21800 32b8de877a85954a23bf2a65faa43cf8 175 Gene3D G3DSA:3.90.960.10 1 164 1.1E-29 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS21800 32b8de877a85954a23bf2a65faa43cf8 175 Pfam PF04073 Aminoacyl-tRNA editing domain 24 148 2.6E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS21800 32b8de877a85954a23bf2a65faa43cf8 175 SUPERFAMILY SSF55826 5 157 1.06E-34 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 Gene3D G3DSA:1.10.1660.10 1 58 5.2E-11 T 28-03-2018 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 Gene3D G3DSA:1.10.1660.10 59 120 6.2E-5 T 28-03-2018 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 SUPERFAMILY SSF46955 4 108 4.03E-16 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 Pfam PF13411 MerR HTH family regulatory protein 4 72 1.2E-11 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 TIGRFAM TIGR02054 MerD: mercuric resistence transcriptional repressor protein MerD 1 119 2.0E-61 T 28-03-2018 IPR011797 Mercuric resistence transcriptional repressor protein MerD GO:0003677|GO:0045892|GO:0046689 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 16 29 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 40 60 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 PRINTS PR00040 MerR bacterial regulatory protein HTH signature 5 16 5.7E-15 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS26610 f134feaab1115e472c5a755ffcf1f517 121 SMART SM00422 4 73 4.5E-21 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS25750 323b6abaa06d647be6cb0df5a7e913c3 278 Pfam PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase 10 256 3.1E-109 T 28-03-2018 IPR006748 Aminoglycoside/hydroxyurea antibiotic resistance kinase GO:0006468|GO:0016773|GO:0019748 CI104_RS25750 323b6abaa06d647be6cb0df5a7e913c3 278 SUPERFAMILY SSF56112 12 263 3.93E-33 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS25750 323b6abaa06d647be6cb0df5a7e913c3 278 Gene3D G3DSA:3.90.1200.10 91 267 2.4E-8 T 28-03-2018 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Pfam PF00271 Helicase conserved C-terminal domain 222 330 6.5E-21 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Pfam PF00570 HRDC domain 533 599 2.9E-24 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 TIGRFAM TIGR01389 recQ: ATP-dependent DNA helicase RecQ 13 601 3.5E-275 T 28-03-2018 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial GO:0004003|GO:0006310|GO:0009432 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Gene3D G3DSA:1.10.10.10 404 523 3.1E-31 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SUPERFAMILY SSF47819 530 605 3.49E-26 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SMART SM00490 250 331 1.8E-28 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Pfam PF09382 RQC domain 406 514 7.1E-33 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Pfam PF00270 DEAD/DEAH box helicase 28 186 2.4E-18 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SUPERFAMILY SSF52540 7 200 5.83E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SMART SM00487 22 216 7.0E-29 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Pfam PF16124 RecQ zinc-binding 343 404 1.2E-15 T 28-03-2018 IPR032284 ATP-dependent DNA helicase RecQ, zinc-binding domain CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Gene3D G3DSA:3.40.50.300 210 403 2.6E-49 T 28-03-2018 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Gene3D G3DSA:1.10.150.80 524 609 5.5E-27 T 28-03-2018 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 TIGRFAM TIGR00614 recQ_fam: ATP-dependent DNA helicase, RecQ family 15 464 4.0E-206 T 28-03-2018 IPR004589 DNA helicase, ATP-dependent, RecQ type GO:0006310|GO:0008026 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SUPERFAMILY SSF52540 208 455 7.73E-64 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 Gene3D G3DSA:3.40.50.300 1 208 8.6E-38 T 28-03-2018 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SMART SM00341 529 609 1.5E-31 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CI104_RS24760 76e3f76fbbde1c895e60da109b2d5bad 609 SMART SM00956 411 514 2.4E-45 T 28-03-2018 IPR018982 RQC domain GO:0006260|GO:0006281|GO:0043140 Reactome: R-HSA-3108214|Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473 CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 SMART SM00065 223 354 0.0032 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 Gene3D G3DSA:3.30.565.10 336 552 4.1E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 Pfam PF01590 GAF domain 227 346 8.3E-5 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 SMART SM00387 452 554 7.2E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 Pfam PF06580 Histidine kinase 359 438 9.3E-25 T 28-03-2018 IPR010559 Signal transduction histidine kinase, internal region GO:0000155|GO:0000160|GO:0016021 CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 Gene3D G3DSA:3.30.450.40 192 335 8.6E-8 T 28-03-2018 IPR029016 GAF domain-like CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 SUPERFAMILY SSF55781 226 345 2.35E-9 T 28-03-2018 IPR029016 GAF domain-like CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 Pfam PF07694 5TMR of 5TMR-LYT 29 193 2.0E-44 T 28-03-2018 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region GO:0000155|GO:0000160|GO:0004673|GO:0016021|GO:0071555 CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 SUPERFAMILY SSF55874 414 551 3.14E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS17950 ab42792ed5eaa13c96e42d85de8375a8 565 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 456 552 4.5E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS04000 be347f1b4af48fd32850b4816d777a7b 346 Pfam PF00248 Aldo/keto reductase family 28 332 3.3E-79 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS04000 be347f1b4af48fd32850b4816d777a7b 346 SUPERFAMILY SSF51430 13 331 3.01E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS04000 be347f1b4af48fd32850b4816d777a7b 346 Gene3D G3DSA:3.20.20.100 15 334 9.5E-87 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS21845 3181ec28bc7d9748b89aaf78f8f9f573 83 Gene3D G3DSA:1.20.910.10 1 83 9.9E-4 T 28-03-2018 IPR016084 Haem oxygenase-like, multi-helical Reactome: R-HSA-189483|Reactome: R-HSA-917937 CI104_RS21845 3181ec28bc7d9748b89aaf78f8f9f573 83 Pfam PF12674 Putative zinc ribbon domain 7 77 1.6E-10 T 28-03-2018 IPR025868 Putative zinc ribbon domain CI104_RS07155 22b74d176736d0b13c71e0088f762a19 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 13 26 1.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS07155 22b74d176736d0b13c71e0088f762a19 193 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 33 56 1.4E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS07155 22b74d176736d0b13c71e0088f762a19 193 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 4.3E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS07155 22b74d176736d0b13c71e0088f762a19 193 SUPERFAMILY SSF46689 3 76 8.98E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS07155 22b74d176736d0b13c71e0088f762a19 193 Gene3D G3DSA:1.10.357.10 1 193 5.7E-26 T 28-03-2018 CI104_RS07155 22b74d176736d0b13c71e0088f762a19 193 ProSitePatterns PS01081 TetR-type HTH domain signature. 25 55 - T 28-03-2018 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Hamap MF_00046 UDP-N-acetylmuramate--L-alanine ligase [murC]. 19 481 43.123 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Pfam PF01225 Mur ligase family, catalytic domain 21 118 1.7E-29 T 28-03-2018 IPR000713 Mur ligase, N-terminal catalytic domain GO:0005524|GO:0009058 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Gene3D G3DSA:3.90.190.20 325 480 6.0E-34 T 28-03-2018 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 TIGRFAM TIGR01082 murC: UDP-N-acetylmuramate--L-alanine ligase 21 475 8.2E-182 T 28-03-2018 IPR005758 UDP-N-acetylmuramate--L-alanine ligase GO:0008763|GO:0009252 KEGG: 00471+6.3.2.8|KEGG: 00550+6.3.2.8|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 SUPERFAMILY SSF51984 20 106 5.36E-29 T 28-03-2018 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 SUPERFAMILY SSF53244 323 476 6.04E-44 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Gene3D G3DSA:3.40.50.720 1 107 1.2E-17 T 28-03-2018 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Pfam PF08245 Mur ligase middle domain 124 304 7.8E-29 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Pfam PF02875 Mur ligase family, glutamate ligase domain 326 418 5.1E-19 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 SUPERFAMILY SSF53623 105 322 2.49E-73 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS04905 56020df1425aec0cf69288912450dbaa 491 Gene3D G3DSA:3.40.1190.10 108 324 4.8E-54 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS09325 2068670ab7c91d71ffd513a80f6b0c37 342 Gene3D G3DSA:1.10.443.10 170 328 4.5E-15 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS09325 2068670ab7c91d71ffd513a80f6b0c37 342 SUPERFAMILY SSF56349 63 325 5.59E-41 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS09325 2068670ab7c91d71ffd513a80f6b0c37 342 Gene3D G3DSA:3.30.160.60 1 49 2.0E-6 T 28-03-2018 CI104_RS09325 2068670ab7c91d71ffd513a80f6b0c37 342 Gene3D G3DSA:1.10.150.130 50 169 2.4E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS09325 2068670ab7c91d71ffd513a80f6b0c37 342 Pfam PF00589 Phage integrase family 176 321 1.6E-8 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Pfam PF13328 HD domain 43 191 8.9E-40 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Pfam PF04607 Region found in RelA / SpoT proteins 251 360 4.9E-36 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 SUPERFAMILY SSF81301 196 410 2.94E-63 T 28-03-2018 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Gene3D G3DSA:3.30.70.260 660 741 9.7E-12 T 28-03-2018 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 SUPERFAMILY SSF81271 399 465 5.07E-22 T 28-03-2018 IPR012676 TGS-like KEGG: 00970+6.1.1.3 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Pfam PF13291 ACT domain 664 740 3.2E-18 T 28-03-2018 IPR002912 ACT domain CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 TIGRFAM TIGR00691 spoT_relA: RelA/SpoT family protein 63 739 5.8E-187 T 28-03-2018 IPR004811 RelA/SpoT family GO:0015969 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 SUPERFAMILY SSF109604 24 207 7.85E-46 T 28-03-2018 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 SMART SM00954 251 361 1.4E-65 T 28-03-2018 IPR007685 RelA/SpoT GO:0015969 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 SUPERFAMILY SSF55021 665 741 2.01E-14 T 28-03-2018 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Gene3D G3DSA:3.10.20.30 400 475 9.6E-25 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Gene3D G3DSA:3.30.460.10 208 341 1.6E-42 T 28-03-2018 CI104_RS20050 eac8384500804e1b5f32d3fef51e282f 744 Pfam PF02824 TGS domain 406 465 4.5E-21 T 28-03-2018 IPR004095 TGS KEGG: 00970+6.1.1.3 CI104_RS21045 64ab0b2408c0c508197fb3d370f40155 103 Pfam PF04266 ASCH domain 6 94 7.0E-17 T 28-03-2018 IPR007374 ASCH domain CI104_RS21045 64ab0b2408c0c508197fb3d370f40155 103 SMART SM01022 6 102 1.3E-27 T 28-03-2018 IPR007374 ASCH domain CI104_RS21045 64ab0b2408c0c508197fb3d370f40155 103 Hamap MF_00684 UPF0267 protein YqfB [yqfB]. 2 103 32.04 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CI104_RS21045 64ab0b2408c0c508197fb3d370f40155 103 SUPERFAMILY SSF88697 1 102 3.6E-34 T 28-03-2018 IPR015947 PUA-like domain CI104_RS21045 64ab0b2408c0c508197fb3d370f40155 103 PIRSF PIRSF029143 1 103 2.0E-52 T 28-03-2018 IPR008314 Uncharacterised conserved protein UCP029143 CI104_RS21045 64ab0b2408c0c508197fb3d370f40155 103 Gene3D G3DSA:2.30.130.30 1 103 1.1E-21 T 28-03-2018 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 374 522 1.3E-49 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 186 321 1.4E-41 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 SUPERFAMILY SSF52518 357 546 2.5E-65 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 411 430 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 Gene3D G3DSA:3.40.50.970 1 184 5.8E-61 T 28-03-2018 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 1 165 4.4E-56 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 Gene3D G3DSA:3.40.50.970 334 534 7.6E-49 T 28-03-2018 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 TIGRFAM TIGR00118 acolac_lg: acetolactate synthase, large subunit, biosynthetic type 1 545 4.2E-216 T 28-03-2018 IPR012846 Acetolactate synthase, large subunit, biosynthetic GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660 KEGG: 00290+2.2.1.6|KEGG: 00650+2.2.1.6|KEGG: 00660+2.2.1.6|KEGG: 00770+2.2.1.6|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5938|MetaCyc: PWY-5939|MetaCyc: PWY-6389|MetaCyc: PWY-7111 CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 Gene3D G3DSA:3.40.50.1220 185 333 6.3E-49 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 SUPERFAMILY SSF52467 183 341 6.86E-58 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS25015 f88bc83561a59ff51191075eaae2eae4 548 SUPERFAMILY SSF52518 1 173 1.65E-61 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS07975 ea3f9493e698cacf1823c041cd7c56ad 259 TIGRFAM TIGR01469 cobA_cysG_Cterm: uroporphyrinogen-III C-methyltransferase 5 240 2.0E-95 T 28-03-2018 IPR006366 Uroporphyrin-III C-methyltransferase GO:0006779|GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS07975 ea3f9493e698cacf1823c041cd7c56ad 259 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 6 216 1.3E-43 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS07975 ea3f9493e698cacf1823c041cd7c56ad 259 ProSitePatterns PS00839 Uroporphyrin-III C-methyltransferase signature 1. 10 24 - T 28-03-2018 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site GO:0008168|GO:0055114 KEGG: 00270+2.1.1.10|KEGG: 00860+4.99.1.4+1.3.1.76+2.1.1.107|MetaCyc: PWY-5194|MetaCyc: PWY-5196|MetaCyc: PWY-5441|MetaCyc: PWY-702|MetaCyc: PWY-7377 CI104_RS07975 ea3f9493e698cacf1823c041cd7c56ad 259 Gene3D G3DSA:3.40.1010.10 4 129 9.4E-34 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS07975 ea3f9493e698cacf1823c041cd7c56ad 259 Gene3D G3DSA:3.30.950.10 130 256 9.5E-36 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS07975 ea3f9493e698cacf1823c041cd7c56ad 259 SUPERFAMILY SSF53790 4 246 2.75E-78 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 Gene3D G3DSA:3.40.50.150 29 271 1.0E-82 T 28-03-2018 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 Gene3D G3DSA:3.50.50.60 274 690 4.3E-44 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 SUPERFAMILY SSF51905 591 680 1.04E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 SUPERFAMILY SSF51905 287 498 1.04E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 Pfam PF05430 S-adenosyl-L-methionine-dependent methyltransferase 138 264 1.2E-48 T 28-03-2018 IPR008471 MnmC-like methyltransferase GO:0016645|GO:0055114 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 SUPERFAMILY SSF53335 160 261 2.71E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 SUPERFAMILY SSF53335 82 120 2.71E-5 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 TIGRFAM TIGR03197 MnmC_Cterm: tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain 286 682 2.7E-155 T 28-03-2018 IPR017610 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal GO:0008168|GO:0016645|GO:0055114 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 Hamap MF_01102 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC [mnmC]. 27 677 28.211 T 28-03-2018 IPR023032 tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein MnmC GO:0004808|GO:0008033|GO:0008168|GO:0016645|GO:0055114 CI104_RS17785 a6c48d8d88108d38b408d014f518ae36 690 Pfam PF01266 FAD dependent oxidoreductase 287 652 1.7E-45 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 Pfam PF13439 Glycosyltransferase Family 4 15 210 2.0E-7 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 SUPERFAMILY SSF53756 14 44 1.3E-58 T 28-03-2018 CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 SUPERFAMILY SSF53756 85 404 1.3E-58 T 28-03-2018 CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 Pfam PF00534 Glycosyl transferases group 1 214 371 3.1E-39 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 Gene3D G3DSA:3.40.50.2000 13 215 4.2E-4 T 28-03-2018 CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 TIGRFAM TIGR04005 wcaL: colanic acid biosynthesis glycosyltransferase WcaL 1 406 5.5E-262 T 28-03-2018 IPR023884 Colanic acid biosynthesis, glycosyl transferase, WcaL CI104_RS16470 25dec4483ba4c2c850d37f1a07d15d7d 406 Gene3D G3DSA:3.40.50.2000 216 391 5.3E-36 T 28-03-2018 CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 SUPERFAMILY SSF51735 7 264 3.31E-81 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 Gene3D G3DSA:3.40.50.720 1 39 9.7E-9 T 28-03-2018 CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 Gene3D G3DSA:3.40.50.720 40 265 3.1E-66 T 28-03-2018 CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 143 171 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 83 94 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 136 144 1.7E-10 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 262 6.6E-64 T 28-03-2018 CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 83 94 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 130 146 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 226 246 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07225 a53da6de016e841c36c98b58d5650f01 265 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 1.8E-41 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 Gene3D G3DSA:3.40.1160.10 1 315 1.2E-45 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 Pfam PF00696 Amino acid kinase family 4 296 2.3E-25 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PIRSF PIRSF000723 1 315 3.5E-128 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 77 95 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 111 130 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 184 202 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 215 230 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 44 63 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 270 285 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 PRINTS PR01469 Bacterial carbamate kinase signature 161 180 5.4E-60 T 28-03-2018 CI104_RS20535 45bebdd65301b132b143b0a8a89ad24f 316 SUPERFAMILY SSF53633 3 313 1.24E-71 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS25525 be657c3c2dbcfe959b492531be6f8010 85 Gene3D G3DSA:1.10.1780.10 2 80 4.5E-4 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS01340 40604a8e3b0f97be6f8fd4e1303e38ae 353 Gene3D G3DSA:1.10.10.10 6 95 1.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01340 40604a8e3b0f97be6f8fd4e1303e38ae 353 Pfam PF00891 O-methyltransferase 180 332 1.1E-17 T 28-03-2018 IPR001077 O-methyltransferase, family 2 GO:0008171 CI104_RS01340 40604a8e3b0f97be6f8fd4e1303e38ae 353 Gene3D G3DSA:3.40.50.150 96 353 4.4E-31 T 28-03-2018 CI104_RS01340 40604a8e3b0f97be6f8fd4e1303e38ae 353 SUPERFAMILY SSF53335 96 340 3.1E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 360 374 1.1E-37 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 58 77 1.1E-37 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 424 437 1.1E-37 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 345 359 1.1E-37 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 PRINTS PR00922 D-Ala-D-Ala carboxypeptidase 3 (S13) family signature 286 308 1.1E-37 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 SUPERFAMILY SSF56601 23 473 1.48E-100 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 TIGRFAM TIGR00666 PBP4: D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 48 447 7.4E-180 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 Gene3D G3DSA:3.40.710.10 20 477 1.3E-39 T 28-03-2018 CI104_RS02795 7420a0f8b5d060ef62b89d42f104552f 477 Pfam PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family 20 468 1.6E-171 T 28-03-2018 IPR000667 Peptidase S13, D-Ala-D-Ala carboxypeptidase C GO:0004185|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 186 372 1.9E-41 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 TIGRFAM TIGR03316 ygeW: knotted carbamoyltransferase YgeW 5 393 2.5E-200 T 28-03-2018 IPR017702 Putative carbamoyltransferase YgeW CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 21 177 9.6E-25 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 SUPERFAMILY SSF53671 18 372 2.62E-58 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 322 331 1.0E-8 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 66 85 1.0E-8 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 340 363 1.0E-8 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 56 78 2.6E-7 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 163 180 2.6E-7 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 PRINTS PR00101 Aspartate carbamoyltransferase signature 94 103 2.6E-7 T 28-03-2018 IPR002082 Aspartate carbamoyltransferase GO:0004070|GO:0006207 KEGG: 00240+2.1.3.2|KEGG: 00250+2.1.3.2|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 Gene3D G3DSA:3.40.50.1370 7 176 3.3E-33 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS20905 bb7ae6f8dd7b24759070da3303dc1d98 395 Gene3D G3DSA:3.40.50.1370 177 377 3.7E-38 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS17490 644eaf3b561f4b787c05ffed713aef71 485 Pfam PF00361 Proton-conducting membrane transporter 122 420 4.7E-90 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17490 644eaf3b561f4b787c05ffed713aef71 485 Hamap MF_00445 NAD(P)H-quinone oxidoreductase subunit 2, chloroplastic [ndhB]. 6 475 17.865 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CI104_RS17490 644eaf3b561f4b787c05ffed713aef71 485 TIGRFAM TIGR01770 NDH_I_N: proton-translocating NADH-quinone oxidoreductase, chain N 9 475 1.9E-147 T 28-03-2018 IPR010096 NAD(P)H-quinone oxidoreductase, subunit N/subunit 2 GO:0008137|GO:0042773|GO:0055114 CI104_RS17675 cfb52029e318a56275f2ad0d803df749 235 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 21 122 6.6E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS17675 cfb52029e318a56275f2ad0d803df749 235 SUPERFAMILY SSF161098 17 224 1.19E-36 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17675 cfb52029e318a56275f2ad0d803df749 235 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 37 224 7.2E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17675 cfb52029e318a56275f2ad0d803df749 235 Gene3D G3DSA:1.10.3720.10 6 233 3.9E-32 T 28-03-2018 CI104_RS09845 c4469606a590a8dfa2ccc3307611a0ae 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 29.346 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CI104_RS09845 c4469606a590a8dfa2ccc3307611a0ae 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 5.1E-41 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 Pfam PF00694 Aconitase C-terminal domain 691 818 3.0E-51 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 SUPERFAMILY SSF53732 10 625 8.63E-224 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 Gene3D G3DSA:3.30.499.10 31 239 9.4E-75 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 ProSitePatterns PS01244 Aconitase family signature 2. 493 506 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 Pfam PF00330 Aconitase family (aconitate hydratase) 69 562 4.9E-181 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 ProSitePatterns PS00450 Aconitase family signature 1. 427 443 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 TIGRFAM TIGR01341 aconitase_1: aconitate hydratase 1 18 890 0.0 T 28-03-2018 IPR006249 Aconitase/Iron-responsive element-binding protein 2 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00720+4.2.1.3|Reactome: R-HSA-917937 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 SUPERFAMILY SSF52016 630 890 4.91E-91 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 217 232 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 431 442 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 279 292 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 293 306 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 146 159 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 203 216 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 493 506 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 170 178 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 PRINTS PR00415 Aconitase family signature 372 386 1.5E-42 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 Gene3D G3DSA:3.40.1060.10 240 371 1.4E-44 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 Gene3D G3DSA:3.20.19.10 652 891 3.7E-94 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS14090 5d09b0992c4d1fd7c8888214ef277c20 891 Gene3D G3DSA:3.30.499.10 372 576 8.1E-62 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 SUPERFAMILY SSF46785 3 77 1.18E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 Hamap MF_00173 Arginine repressor [argR]. 1 155 60.402 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 ProDom PD007402 ARGININE REPRESSOR TRANSCRIPTION BIOSYNTHESIS DNA-BINDING REGULATION AMINO-ACID ARGR TRANSCRIPTIONAL FAMILY 89 153 2.0E-30 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 Gene3D G3DSA:3.30.1360.40 76 151 2.7E-26 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 Pfam PF02863 Arginine repressor, C-terminal domain 82 148 1.4E-22 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 Gene3D G3DSA:1.10.10.10 5 69 7.3E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 PRINTS PR01467 Bacterial arginine repressor signature 90 103 9.6E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 PRINTS PR01467 Bacterial arginine repressor signature 42 57 9.6E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 PRINTS PR01467 Bacterial arginine repressor signature 121 136 9.6E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 PRINTS PR01467 Bacterial arginine repressor signature 25 38 9.6E-24 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 SUPERFAMILY SSF55252 82 151 1.57E-19 T 28-03-2018 IPR020899 Arginine repressor, C-terminal GO:0034618|GO:0051259 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 TIGRFAM TIGR01529 argR_whole: arginine repressor 9 152 1.5E-47 T 28-03-2018 IPR001669 Arginine repressor GO:0003700|GO:0006355 CI104_RS02535 a02b8cd42278288aee5d2c84bdad9e7d 156 Pfam PF01316 Arginine repressor, DNA binding domain 5 74 2.0E-25 T 28-03-2018 IPR020900 Arginine repressor, DNA-binding domain GO:0003700|GO:0006355|GO:0006525 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 Gene3D G3DSA:1.10.10.10 116 187 2.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 Pfam PF04542 Sigma-70 region 2 25 91 3.3E-17 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 Pfam PF08281 Sigma-70, region 4 129 180 4.5E-19 T 28-03-2018 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 TIGRFAM TIGR02939 RpoE_Sigma70: RNA polymerase sigma factor RpoE 1 189 6.8E-99 T 28-03-2018 IPR014286 RNA polymerase sigma-70 RpoE type GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 Gene3D G3DSA:1.10.1740.10 1 115 6.7E-31 T 28-03-2018 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 SUPERFAMILY SSF88946 2 105 2.98E-31 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 21 183 6.2E-31 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 SUPERFAMILY SSF88659 122 183 9.53E-19 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS18850 f3245c5f3693cc42af24c36c259d8cb7 191 ProSitePatterns PS01063 Sigma-70 factors ECF subfamily signature. 46 77 - T 28-03-2018 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 Pfam PF12626 Polymerase A arginine-rich C-terminus 345 463 4.7E-41 T 28-03-2018 IPR025866 Polymerase A arginine-rich C-terminal domain CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 Pfam PF01743 Poly A polymerase head domain 69 200 2.7E-39 T 28-03-2018 IPR002646 Poly A polymerase, head domain GO:0003723|GO:0006396|GO:0016779 Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 Pfam PF12627 Probable RNA and SrmB- binding site of polymerase A 227 287 1.3E-19 T 28-03-2018 IPR032828 tRNA nucleotidyltransferase/poly(A) polymerase, RNA and SrmB- binding domain Reactome: R-HSA-6784531|Reactome: R-HSA-6785470 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 SUPERFAMILY SSF81891 198 436 8.37E-50 T 28-03-2018 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 SUPERFAMILY SSF81301 41 196 3.52E-40 T 28-03-2018 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 Gene3D G3DSA:3.30.460.10 35 197 1.2E-52 T 28-03-2018 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 Gene3D G3DSA:1.10.3090.10 198 441 2.3E-43 T 28-03-2018 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 TIGRFAM TIGR01942 pcnB: poly(A) polymerase 38 465 1.5E-157 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CI104_RS05165 937ec518da2c52ea303dc39e29c39468 472 Hamap MF_00957 Poly(A) polymerase I [pcnB]. 31 467 39.02 T 28-03-2018 IPR010206 Poly(A) polymerase I GO:0003723|GO:0004652|GO:0006378 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 378 443 1.4E-9 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Gene3D G3DSA:3.40.120.10 268 370 2.5E-28 T 28-03-2018 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 SUPERFAMILY SSF53738 263 368 1.02E-33 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 153 258 3.8E-22 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Gene3D G3DSA:3.40.120.10 160 267 6.5E-31 T 28-03-2018 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 SUPERFAMILY SSF53738 153 261 6.67E-28 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Gene3D G3DSA:3.30.310.50 371 456 2.0E-12 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 SUPERFAMILY SSF55957 374 456 3.49E-17 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 91 105 4.8E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 238 253 4.8E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 170 189 4.8E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 PRINTS PR00509 Phosphoglucomutase/phosphomannomutase family signature 209 222 4.8E-32 T 28-03-2018 IPR005841 Alpha-D-phosphohexomutase superfamily GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 7 131 1.3E-32 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 SUPERFAMILY SSF53738 3 176 9.03E-39 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Gene3D G3DSA:3.40.120.10 1 159 6.4E-41 T 28-03-2018 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 92 101 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS16490 e2cf70c6bc45bea7b88ab598f8b9beaa 456 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 263 372 1.3E-25 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 Pfam PF08220 DeoR-like helix-turn-helix domain 18 73 4.7E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 SMART SM01134 87 248 2.1E-73 T 28-03-2018 CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 ProSitePatterns PS00894 DeoR-type HTH domain signature. 18 52 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 Pfam PF00455 DeoR C terminal sensor domain 89 247 2.1E-56 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 Gene3D G3DSA:1.10.10.10 8 79 1.1E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 Gene3D G3DSA:3.40.50.1360 80 255 3.0E-43 T 28-03-2018 CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 SMART SM00420 18 70 1.0E-20 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 SUPERFAMILY SSF46785 16 71 4.75E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03075 644f1e9673c7c684d6e6e63806558ba9 267 SUPERFAMILY SSF100950 89 250 5.44E-33 T 28-03-2018 CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 SMART SM00342 239 322 4.2E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 Gene3D G3DSA:1.10.10.60 273 328 3.7E-12 T 28-03-2018 CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 SUPERFAMILY SSF46689 223 273 3.86E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 SUPERFAMILY SSF46689 276 326 2.88E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 Pfam PF12833 Helix-turn-helix domain 245 323 3.0E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 Pfam PF01965 DJ-1/PfpI family 16 183 5.2E-19 T 28-03-2018 IPR002818 DJ-1/PfpI CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 Gene3D G3DSA:3.40.50.880 10 219 8.9E-56 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 SUPERFAMILY SSF52317 16 204 8.1E-49 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS12810 a394447bc6d3e96a64dc6b0f01f71ad2 330 Gene3D G3DSA:1.10.10.60 220 272 4.9E-10 T 28-03-2018 CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 Pfam PF03330 Lytic transglycolase 81 168 1.4E-19 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 TIGRFAM TIGR00413 rlpA: rare lipoprotein A 83 182 6.9E-29 T 28-03-2018 IPR012997 Rare lipoprotein A CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 Gene3D G3DSA:2.40.40.10 59 171 3.9E-15 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 SUPERFAMILY SSF110997 294 364 2.22E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 SUPERFAMILY SSF50685 85 162 1.5E-6 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 Hamap MF_02071 Endolytic peptidoglycan transglycosylase RlpA [rlpA]. 11 171 20.598 T 28-03-2018 IPR034718 Endolytic peptidoglycan transglycosylase RlpA GO:0016829 CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 Pfam PF05036 Sporulation related domain 294 365 5.2E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS07520 de8544038492a9112b67f8ca7335e628 369 Gene3D G3DSA:3.30.70.1070 296 368 5.6E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 Gene3D G3DSA:3.40.50.300 454 665 8.7E-14 T 28-03-2018 CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SUPERFAMILY SSF52540 185 239 1.92E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SUPERFAMILY SSF52540 453 510 1.92E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SUPERFAMILY SSF52540 547 626 1.92E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SUPERFAMILY SSF52540 319 415 1.92E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SUPERFAMILY SSF52540 566 712 1.16E-12 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 Pfam PF00270 DEAD/DEAH box helicase 183 246 1.7E-8 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SMART SM00490 553 625 0.0068 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 Pfam PF00271 Helicase conserved C-terminal domain 581 624 4.8E-8 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 SMART SM00487 151 440 6.2E-15 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS21890 fdfda2e3a66b0e5082840c76625e87d1 1478 Gene3D G3DSA:3.40.50.300 134 438 2.7E-21 T 28-03-2018 CI104_RS15480 744d5222fb7511eb7df7547829184693 129 SMART SM00448 6 120 2.4E-34 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS15480 744d5222fb7511eb7df7547829184693 129 Gene3D G3DSA:3.40.50.2300 3 128 3.5E-35 T 28-03-2018 CI104_RS15480 744d5222fb7511eb7df7547829184693 129 SUPERFAMILY SSF52172 5 125 6.26E-35 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS15480 744d5222fb7511eb7df7547829184693 129 Pfam PF00072 Response regulator receiver domain 9 120 8.2E-32 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS04300 8664b635824057bd968d68ea417240ee 169 Pfam PF05068 Mannitol repressor 5 167 8.4E-51 T 28-03-2018 IPR007761 Mannitol repressor MtlR-like CI104_RS04300 8664b635824057bd968d68ea417240ee 169 Gene3D G3DSA:1.20.120.330 4 167 2.4E-45 T 28-03-2018 CI104_RS04300 8664b635824057bd968d68ea417240ee 169 SUPERFAMILY SSF158668 1 167 5.89E-53 T 28-03-2018 CI104_RS08210 f261266307d067b69b43af32c48c9916 229 Gene3D G3DSA:1.10.3720.10 4 227 2.0E-38 T 28-03-2018 CI104_RS08210 f261266307d067b69b43af32c48c9916 229 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 219 5.9E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08210 f261266307d067b69b43af32c48c9916 229 SUPERFAMILY SSF161098 6 219 2.35E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08210 f261266307d067b69b43af32c48c9916 229 TIGRFAM TIGR02141 modB_ABC: molybdate ABC transporter, permease protein 12 220 2.6E-72 T 28-03-2018 IPR011867 Molybdate ABC transporter, permease protein GO:0015098|GO:0015689|GO:0016021 CI104_RS15575 9e0bcd18061f9b3a8d93611b6358f5e0 266 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 18 213 2.0E-23 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS15575 9e0bcd18061f9b3a8d93611b6358f5e0 266 SUPERFAMILY SSF56784 18 243 2.36E-39 T 28-03-2018 IPR023214 HAD-like domain CI104_RS15575 9e0bcd18061f9b3a8d93611b6358f5e0 266 Pfam PF02358 Trehalose-phosphatase 18 229 9.9E-53 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CI104_RS15575 9e0bcd18061f9b3a8d93611b6358f5e0 266 TIGRFAM TIGR00685 T6PP: trehalose-phosphatase 12 243 9.3E-76 T 28-03-2018 IPR003337 Trehalose-phosphatase GO:0003824|GO:0005992 CI104_RS15575 9e0bcd18061f9b3a8d93611b6358f5e0 266 Gene3D G3DSA:3.40.50.1000 14 260 3.8E-25 T 28-03-2018 IPR023214 HAD-like domain CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 109 136 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 320 345 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 36 60 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 168 194 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 361 379 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 252 271 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 198 223 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PRINTS PR00083 Histidinol dehydrogenase signature 230 251 4.2E-102 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 PIRSF PIRSF000099 1 430 6.6E-170 T 28-03-2018 IPR022695 Histidinol dehydrogenase, monofunctional GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 SUPERFAMILY SSF53720 6 429 2.35E-90 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 Gene3D G3DSA:3.40.50.1980 226 371 2.6E-69 T 28-03-2018 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 Hamap MF_01024 Histidinol dehydrogenase [hisD]. 7 427 41.025 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 Pfam PF00815 Histidinol dehydrogenase 28 427 1.8E-164 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 Gene3D G3DSA:3.40.50.1980 29 225 3.3E-87 T 28-03-2018 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 TIGRFAM TIGR00069 hisD: histidinol dehydrogenase 36 426 2.1E-159 T 28-03-2018 IPR012131 Histidinol dehydrogenase GO:0000105|GO:0004399|GO:0008270|GO:0051287|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS16350 141d76b2d356eba1ce97d20bf0e00836 434 ProSitePatterns PS00611 Histidinol dehydrogenase signature. 230 262 - T 28-03-2018 IPR001692 Histidinol dehydrogenase, conserved site GO:0000105|GO:0004399|GO:0055114 KEGG: 00340+1.1.1.23 CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 Pfam PF00005 ABC transporter 24 181 7.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 SUPERFAMILY SSF52540 31 309 7.74E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 Gene3D G3DSA:3.40.50.300 1 324 5.9E-76 T 28-03-2018 CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 233 297 3.9E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 231 317 1.0E-26 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS01005 d03cf2b3747654b7f5cdcc9c2138adc3 327 SMART SM00382 32 231 4.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05525 ae22c57f17bf2885784e92d6d57f3e47 155 Hamap MF_00042 Ribonuclease H [rnhA]. 2 150 39.557 T 28-03-2018 IPR022892 Ribonuclease HI GO:0004523 CI104_RS05525 ae22c57f17bf2885784e92d6d57f3e47 155 SUPERFAMILY SSF53098 4 141 2.78E-58 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS05525 ae22c57f17bf2885784e92d6d57f3e47 155 Gene3D G3DSA:3.30.420.10 1 154 1.6E-54 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS05525 ae22c57f17bf2885784e92d6d57f3e47 155 Pfam PF00075 RNase H 3 141 3.2E-54 T 28-03-2018 IPR002156 Ribonuclease H domain GO:0003676|GO:0004523 CI104_RS24430 98f6d720401e7a1bed60eb0d66a374d7 82 Pfam PF01402 Ribbon-helix-helix protein, copG family 16 49 5.1E-6 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CI104_RS24430 98f6d720401e7a1bed60eb0d66a374d7 82 Gene3D G3DSA:1.10.1220.10 7 63 5.2E-12 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 209 1.0E-22 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 SUPERFAMILY SSF52172 6 135 7.26E-36 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.1E-13 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 SMART SM00421 153 210 1.3E-25 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 Gene3D G3DSA:1.10.10.10 139 215 1.6E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 SUPERFAMILY SSF46894 147 213 1.94E-20 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 Gene3D G3DSA:3.40.50.2300 6 138 1.3E-37 T 28-03-2018 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 SMART SM00448 7 120 7.2E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS14380 042c5931eeb598dc16eb0cd42410dca2 216 Pfam PF00072 Response regulator receiver domain 9 120 5.3E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS21550 f12cf564a689a04aef1b1fbe85bce535 427 Pfam PF04286 Protein of unknown function (DUF445) 44 417 7.5E-108 T 28-03-2018 IPR007383 Protein of unknown function DUF445 CI104_RS00360 9666af654f81c45d106ab0bea5c9a8c2 70 Pfam PF07338 Protein of unknown function (DUF1471) 24 70 1.2E-10 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS00360 9666af654f81c45d106ab0bea5c9a8c2 70 SUPERFAMILY SSF159871 3 70 7.46E-14 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS00360 9666af654f81c45d106ab0bea5c9a8c2 70 Gene3D G3DSA:3.30.1660.10 11 70 5.7E-15 T 28-03-2018 IPR025543 Dodecin-like CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 Pfam PF03702 Anhydro-N-acetylmuramic acid kinase 5 367 4.1E-171 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 SUPERFAMILY SSF53067 66 111 1.19E-28 T 28-03-2018 CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 SUPERFAMILY SSF53067 143 341 1.19E-28 T 28-03-2018 CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 SUPERFAMILY SSF53067 5 36 1.19E-28 T 28-03-2018 CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 Gene3D G3DSA:3.30.420.40 3 182 8.3E-55 T 28-03-2018 CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 Gene3D G3DSA:3.30.420.40 219 373 1.2E-28 T 28-03-2018 CI104_RS12455 af405233d7c2c3b2cc95dc33a0974e0c 373 Hamap MF_01270 Anhydro-N-acetylmuramic acid kinase [anmK]. 4 367 41.827 T 28-03-2018 IPR005338 Anhydro-N-acetylmuramic acid kinase GO:0005524|GO:0006040|GO:0009254|GO:0016773 KEGG: 00040+2.7.1.17 CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 SUPERFAMILY SSF141571 55 215 3.79E-41 T 28-03-2018 CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF13599 Pentapeptide repeats (9 copies) 55 105 6.4E-9 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 Gene3D G3DSA:2.160.20.80 1 217 7.9E-48 T 28-03-2018 CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 SUPERFAMILY SSF141571 2 49 5.23E-10 T 28-03-2018 CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF00805 Pentapeptide repeats (8 copies) 122 161 4.6E-6 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF00805 Pentapeptide repeats (8 copies) 173 197 0.0019 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25695 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF00805 Pentapeptide repeats (8 copies) 12 45 9.2E-7 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 SUPERFAMILY SSF141571 55 215 3.79E-41 T 28-03-2018 CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF13599 Pentapeptide repeats (9 copies) 55 105 6.4E-9 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 Gene3D G3DSA:2.160.20.80 1 217 7.9E-48 T 28-03-2018 CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 SUPERFAMILY SSF141571 2 49 5.23E-10 T 28-03-2018 CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF00805 Pentapeptide repeats (8 copies) 122 161 4.6E-6 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF00805 Pentapeptide repeats (8 copies) 173 197 0.0019 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS25665 c9be9436aafee96d0b3fd2983cd65f8b 218 Pfam PF00805 Pentapeptide repeats (8 copies) 12 45 9.2E-7 T 28-03-2018 IPR001646 Pentapeptide repeat CI104_RS16520 b9bfd53129194a0a049ddc90a492c4d5 188 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 133 161 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS16520 b9bfd53129194a0a049ddc90a492c4d5 188 SUPERFAMILY SSF51161 21 180 1.94E-38 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS16520 b9bfd53129194a0a049ddc90a492c4d5 188 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 125 157 6.0E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS16520 b9bfd53129194a0a049ddc90a492c4d5 188 TIGRFAM TIGR04008 WcaF: colanic acid biosynthesis acetyltransferase WcaF 1 179 9.9E-119 T 28-03-2018 IPR024005 Colanic acid biosynthesis, acetyltransferase, WcaF CI104_RS16520 b9bfd53129194a0a049ddc90a492c4d5 188 Gene3D G3DSA:2.160.10.10 17 184 1.1E-31 T 28-03-2018 CI104_RS18410 a26d42c63a86d909b5a6062eadcb35b8 156 PIRSF PIRSF000239 1 153 1.4E-17 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS18410 a26d42c63a86d909b5a6062eadcb35b8 156 Gene3D G3DSA:3.40.30.10 1 154 2.4E-42 T 28-03-2018 CI104_RS18410 a26d42c63a86d909b5a6062eadcb35b8 156 Pfam PF00578 AhpC/TSA family 7 134 6.4E-39 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS18410 a26d42c63a86d909b5a6062eadcb35b8 156 SUPERFAMILY SSF52833 3 154 4.69E-50 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 SUPERFAMILY SSF53335 1 283 5.98E-69 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 Gene3D G3DSA:1.10.1020.10 55 168 2.5E-29 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 PIRSF PIRSF000398 1 291 1.2E-61 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 8 24 9.2E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 9.2E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 48 61 9.2E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 192 204 9.2E-16 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 Gene3D G3DSA:3.40.50.150 169 286 1.3E-17 T 28-03-2018 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 TIGRFAM TIGR00571 dam: DNA adenine methylase 3 283 1.5E-78 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 8 268 1.1E-55 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS06845 b4b00e1dddf408a2db3a4790173d1ec0 329 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 195 201 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS00525 a829eae9f6e1d3a9a8d96fa127c656c4 55 SUPERFAMILY SSF57829 1 53 3.3E-20 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CI104_RS00525 a829eae9f6e1d3a9a8d96fa127c656c4 55 ProSitePatterns PS00582 Ribosomal protein L33 signature. 21 40 - T 28-03-2018 IPR018264 Ribosomal protein L33, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS00525 a829eae9f6e1d3a9a8d96fa127c656c4 55 TIGRFAM TIGR01023 rpmG_bact: ribosomal protein bL33 1 55 5.9E-28 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS00525 a829eae9f6e1d3a9a8d96fa127c656c4 55 Pfam PF00471 Ribosomal protein L33 7 53 7.3E-19 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS00525 a829eae9f6e1d3a9a8d96fa127c656c4 55 Hamap MF_00294 50S ribosomal protein L33 [rpmG]. 5 53 15.857 T 28-03-2018 IPR001705 Ribosomal protein L33 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03745 4db5ec4894c51ff46472b99757fa6192 121 SMART SM00905 4 114 1.4E-46 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS03745 4db5ec4894c51ff46472b99757fa6192 121 Pfam PF02152 Dihydroneopterin aldolase 4 113 1.4E-31 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS03745 4db5ec4894c51ff46472b99757fa6192 121 TIGRFAM TIGR00526 folB_dom: FolB domain 1 118 1.2E-41 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS03745 4db5ec4894c51ff46472b99757fa6192 121 Gene3D G3DSA:3.30.1130.10 1 121 8.0E-36 T 28-03-2018 CI104_RS03745 4db5ec4894c51ff46472b99757fa6192 121 TIGRFAM TIGR00525 folB: dihydroneopterin aldolase 4 114 4.9E-27 T 28-03-2018 IPR006156 Dihydroneopterin aldolase GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS03745 4db5ec4894c51ff46472b99757fa6192 121 SUPERFAMILY SSF55620 1 115 5.5E-36 T 28-03-2018 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 13 148 1.6E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Pfam PF03144 Elongation factor Tu domain 2 225 293 3.2E-17 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 51 66 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Hamap MF_00118_B Elongation factor Tu [tuf]. 1 394 61.059 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Gene3D G3DSA:2.40.30.10 300 393 1.8E-32 T 28-03-2018 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 PRINTS PR00315 GTP-binding elongation factor signature 14 27 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 PRINTS PR00315 GTP-binding elongation factor signature 58 66 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 PRINTS PR00315 GTP-binding elongation factor signature 131 140 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 PRINTS PR00315 GTP-binding elongation factor signature 94 105 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 PRINTS PR00315 GTP-binding elongation factor signature 78 88 1.5E-24 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Pfam PF00009 Elongation factor Tu GTP binding domain 10 200 5.6E-58 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Pfam PF03143 Elongation factor Tu C-terminal domain 298 392 4.8E-33 T 28-03-2018 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Gene3D G3DSA:3.40.50.300 75 203 9.9E-31 T 28-03-2018 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 SUPERFAMILY SSF50465 298 393 4.32E-36 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 TIGRFAM TIGR00485 EF-Tu: translation elongation factor Tu 1 393 5.7E-239 T 28-03-2018 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle GO:0003746|GO:0005525|GO:0005622|GO:0006414 Reactome: R-HSA-5389840 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Gene3D G3DSA:3.40.50.300 2 74 5.6E-11 T 28-03-2018 CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 SUPERFAMILY SSF52540 6 219 2.02E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 SUPERFAMILY SSF50447 205 301 2.16E-30 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS23805 8c1e24d1195d7759cfa576f33a585683 394 Gene3D G3DSA:2.40.30.10 206 299 1.2E-32 T 28-03-2018 CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 SUPERFAMILY SSF53335 32 184 8.22E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 54 68 3.9E-6 T 28-03-2018 CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 113 125 3.9E-6 T 28-03-2018 CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 30 46 3.9E-6 T 28-03-2018 CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 Pfam PF05175 Methyltransferase small domain 42 148 2.4E-7 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 Gene3D G3DSA:3.40.50.150 7 181 1.6E-21 T 28-03-2018 CI104_RS28155 7755e3a41bdaf1808be10ad940b635d1 187 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 116 122 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 SUPERFAMILY SSF51338 1 53 3.51E-17 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 Gene3D G3DSA:3.20.20.140 69 350 1.8E-92 T 28-03-2018 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 1 376 5.0E-179 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 Gene3D G3DSA:2.30.40.10 2 68 1.6E-9 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 Pfam PF01979 Amidohydrolase family 50 379 1.1E-46 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 PIRSF PIRSF038994 1 382 5.0E-113 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CI104_RS07690 e295858179893c3d0cd6820f63c7ef68 382 SUPERFAMILY SSF51556 54 350 1.31E-100 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 SUPERFAMILY SSF52374 3 156 6.97E-46 T 28-03-2018 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 Gene3D G3DSA:3.40.50.620 1 159 9.4E-35 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 TIGRFAM TIGR01510 coaD_prev_kdtB: pantetheine-phosphate adenylyltransferase 4 157 1.8E-61 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 Pfam PF01467 Cytidylyltransferase-like 6 134 2.7E-22 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 12 78 9.0E-4 T 28-03-2018 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 4 62 3.4E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 113 135 1.1E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 86 102 1.1E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 3 21 1.1E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 50 74 1.1E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 PRINTS PR01020 Lipopolysaccharide core biosynthesis protein signature 21 42 1.1E-51 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS00535 4d0ce58c6b0a5c1b598aa6fed6199376 159 Hamap MF_00151 Phosphopantetheine adenylyltransferase [coaD]. 3 159 36.754 T 28-03-2018 IPR001980 Phosphopantetheine adenylyltransferase GO:0004595|GO:0015937 KEGG: 00770+2.7.7.3|MetaCyc: PWY-7851 CI104_RS20355 571ff16ed14ed9cbf900d47459027015 291 Pfam PF01790 Prolipoprotein diacylglyceryl transferase 13 280 1.4E-76 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CI104_RS20355 571ff16ed14ed9cbf900d47459027015 291 ProSitePatterns PS01311 Prolipoprotein diacylglyceryl transferase signature. 142 154 - T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CI104_RS20355 571ff16ed14ed9cbf900d47459027015 291 TIGRFAM TIGR00544 lgt: prolipoprotein diacylglyceryl transferase 1 287 3.3E-108 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CI104_RS20355 571ff16ed14ed9cbf900d47459027015 291 Hamap MF_01147 Prolipoprotein diacylglyceryl transferase [lgt]. 10 285 20.19 T 28-03-2018 IPR001640 Prolipoprotein diacylglyceryl transferase GO:0009249|GO:0016020|GO:0016757|GO:0042158 CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 PIRSF PIRSF012290 38 270 1.0E-108 T 28-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 Pfam PF00936 BMC domain 186 256 4.9E-14 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 Pfam PF00936 BMC domain 80 148 2.9E-12 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 SMART SM00877 79 161 3.5E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 SMART SM00877 185 262 1.0E-14 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 TIGRFAM TIGR04501 microcomp_PduB: microcompartment protein PduB 46 270 4.1E-120 T 28-03-2018 IPR030984 Microcompartment protein PduB GO:0005198 CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 SUPERFAMILY SSF143414 185 260 1.06E-11 T 28-03-2018 CI104_RS16190 31e4b16a265b2fed7fec3b9eed61db8f 270 SUPERFAMILY SSF143414 79 156 6.02E-9 T 28-03-2018 CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 Gene3D G3DSA:3.30.1190.10 172 294 0.012 T 28-03-2018 CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 51 218 1.5E-28 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 SMART SM00470 52 139 9.0E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 SUPERFAMILY SSF109709 144 228 1.26E-5 T 28-03-2018 CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 Pfam PF08775 ParB family 195 320 2.8E-46 T 28-03-2018 IPR014884 ParB protein family, C-terminal CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 Gene3D G3DSA:1.10.1270.10 70 171 2.7E-4 T 28-03-2018 CI104_RS28050 f46576de756b8080c3d83f7808a030bc 325 Pfam PF02195 ParB-like nuclease domain 63 138 1.4E-5 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 SUPERFAMILY SSF47413 1 56 9.38E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 61 329 5.0E-81 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 SUPERFAMILY SSF53822 65 330 1.71E-38 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 Gene3D G3DSA:3.40.50.2300 54 171 1.4E-17 T 28-03-2018 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 8.9E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 8.9E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 Gene3D G3DSA:1.10.260.40 3 53 4.6E-20 T 28-03-2018 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 3.5E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 Gene3D G3DSA:3.40.50.2300 172 308 1.0E-26 T 28-03-2018 CI104_RS22255 9e8395062162517ab4e561b9ca5c5bc9 331 SMART SM00354 1 73 5.6E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 SUPERFAMILY SSF55979 245 366 1.47E-37 T 28-03-2018 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 SUPERFAMILY SSF55979 125 244 5.5E-30 T 28-03-2018 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 Pfam PF02767 DNA polymerase III beta subunit, central domain 129 243 6.9E-41 T 28-03-2018 IPR022637 DNA polymerase III, beta chain, central GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 Pfam PF00712 DNA polymerase III beta subunit, N-terminal domain 1 120 4.5E-40 T 28-03-2018 IPR022634 DNA polymerase III, beta chain, N-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 PIRSF PIRSF000804 1 366 4.9E-117 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 TIGRFAM TIGR00663 dnan: DNA polymerase III, beta subunit 1 366 1.1E-113 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 Pfam PF02768 DNA polymerase III beta subunit, C-terminal domain 245 365 4.6E-45 T 28-03-2018 IPR022635 DNA polymerase III, beta chain, C-terminal GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 Gene3D G3DSA:3.10.150.10 248 366 3.9E-25 T 28-03-2018 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 Gene3D G3DSA:3.10.150.10 124 247 3.4E-33 T 28-03-2018 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 Gene3D G3DSA:3.10.150.10 1 123 1.7E-27 T 28-03-2018 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 SMART SM00480 17 362 1.2E-173 T 28-03-2018 IPR001001 DNA polymerase III, beta chain GO:0003677|GO:0003887|GO:0006260|GO:0008408|GO:0009360 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS00010 a10cae0b2079cf46eda234a96d9bc43b 366 SUPERFAMILY SSF55979 1 121 1.38E-25 T 28-03-2018 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 SUPERFAMILY SSF52343 257 394 1.14E-36 T 28-03-2018 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Pfam PF00042 Globin 7 102 2.3E-14 T 28-03-2018 IPR000971 Globin GO:0020037 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Gene3D G3DSA:3.40.50.80 255 396 4.6E-22 T 28-03-2018 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 SUPERFAMILY SSF46458 1 142 2.0E-37 T 28-03-2018 IPR009050 Globin-like CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 263 282 4.8E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 358 366 4.8E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 183 195 4.8E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 PRINTS PR00410 Phenol hydroxylase reductase family signature 247 256 4.8E-6 T 28-03-2018 IPR001221 Phenol hydroxylase reductase GO:0055114 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Gene3D G3DSA:2.40.30.10 158 254 1.3E-24 T 28-03-2018 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Gene3D G3DSA:1.10.490.10 1 157 8.4E-39 T 28-03-2018 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 SUPERFAMILY SSF63380 148 253 8.34E-28 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Pfam PF00970 Oxidoreductase FAD-binding domain 157 252 1.9E-8 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Pfam PF00175 Oxidoreductase NAD-binding domain 264 372 3.9E-16 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CI104_RS18725 0a3a7f1e88fd6c7d272d128db0f4be80 396 Hamap MF_01252 Flavohemoprotein [hmp]. 1 396 56.337 T 28-03-2018 IPR023950 Flavohemoprotein GO:0008941|GO:0019825|GO:0020037|GO:0051409|GO:0055114|GO:0071949 CI104_RS14015 3e55c2e878cc1bc250ae47ef3b9cfc62 330 SMART SM00382 32 235 1.4E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS14015 3e55c2e878cc1bc250ae47ef3b9cfc62 330 SUPERFAMILY SSF52540 3 258 3.24E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14015 3e55c2e878cc1bc250ae47ef3b9cfc62 330 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 237 323 1.7E-20 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS14015 3e55c2e878cc1bc250ae47ef3b9cfc62 330 Gene3D G3DSA:3.40.50.300 1 329 3.0E-56 T 28-03-2018 CI104_RS14015 3e55c2e878cc1bc250ae47ef3b9cfc62 330 Pfam PF00005 ABC transporter 24 187 7.3E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS14015 3e55c2e878cc1bc250ae47ef3b9cfc62 330 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 238 305 8.1E-16 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS22175 cc1c17f7f14a747227b8c3b32191e199 99 TIGRFAM TIGR03578 EF_0831: conserved hypothetical protein EF_0831/AHA_3912 2 96 4.1E-42 T 28-03-2018 IPR020037 Protein of unknown function DUF4312 CI104_RS22175 cc1c17f7f14a747227b8c3b32191e199 99 Pfam PF14189 Domain of unknown function (DUF4312) 5 88 7.4E-35 T 28-03-2018 IPR020037 Protein of unknown function DUF4312 CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 Pfam PF01380 SIS domain 46 177 7.8E-34 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 Pfam PF00571 CBS domain 274 325 3.8E-5 T 28-03-2018 IPR000644 CBS domain CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 Pfam PF00571 CBS domain 206 261 1.7E-5 T 28-03-2018 IPR000644 CBS domain CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 50 318 6.8E-130 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 PIRSF PIRSF004692 2 328 3.2E-134 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 Gene3D G3DSA:3.40.50.10490 11 200 7.6E-55 T 28-03-2018 CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 SUPERFAMILY SSF53697 14 326 7.79E-66 T 28-03-2018 CI104_RS02720 ea8d613251db4fd1895036500a2a0e39 328 Gene3D G3DSA:3.10.580.10 201 326 2.0E-18 T 28-03-2018 CI104_RS14670 36dfbb57c9a32b6009c327eb7cf95379 235 TIGRFAM TIGR01222 minC: septum site-determining protein MinC 6 234 5.6E-70 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CI104_RS14670 36dfbb57c9a32b6009c327eb7cf95379 235 Gene3D G3DSA:2.160.20.70 115 235 4.8E-30 T 28-03-2018 CI104_RS14670 36dfbb57c9a32b6009c327eb7cf95379 235 Hamap MF_00267 Probable septum site-determining protein MinC [minC]. 5 235 29.164 T 28-03-2018 IPR013033 Septum formation inhibitor MinC GO:0051726|GO:1901891 CI104_RS14670 36dfbb57c9a32b6009c327eb7cf95379 235 Pfam PF03775 Septum formation inhibitor MinC, C-terminal domain 132 231 4.5E-30 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CI104_RS14670 36dfbb57c9a32b6009c327eb7cf95379 235 Pfam PF05209 Septum formation inhibitor MinC, N-terminal domain 1 103 8.6E-37 T 28-03-2018 IPR007874 Septum formation inhibitor MinC, N-terminal GO:0051302 CI104_RS14670 36dfbb57c9a32b6009c327eb7cf95379 235 SUPERFAMILY SSF63848 129 234 1.96E-30 T 28-03-2018 IPR005526 Septum formation inhibitor MinC, C-terminal GO:0000902 CI104_RS08030 f3e1b405c182998b608585e520507392 149 TIGRFAM TIGR01501 MthylAspMutase: methylaspartate mutase, S subunit 3 135 1.4E-71 T 28-03-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS08030 f3e1b405c182998b608585e520507392 149 Gene3D G3DSA:3.40.50.280 1 148 1.3E-26 T 28-03-2018 CI104_RS08030 f3e1b405c182998b608585e520507392 149 SUPERFAMILY SSF52242 4 138 2.35E-33 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CI104_RS08030 f3e1b405c182998b608585e520507392 149 Pfam PF02310 B12 binding domain 6 95 4.1E-14 T 28-03-2018 IPR006158 Cobalamin (vitamin B12)-binding domain GO:0031419|GO:0046872 Reactome: R-HSA-196741 CI104_RS08030 f3e1b405c182998b608585e520507392 149 Hamap MF_00526 Glutamate mutase sigma subunit [glmS]. 1 137 37.314 T 28-03-2018 IPR006394 Glutamate mutase sigma subunit GO:0016866|GO:0019670 KEGG: 00630+5.4.99.1|KEGG: 00660+5.4.99.1|MetaCyc: PWY-5087|MetaCyc: PWY-5103|MetaCyc: PWY-6728 CI104_RS10690 5ca226696f47110e6559192ba04968ae 101 Gene3D G3DSA:1.10.10.10 6 100 5.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10690 5ca226696f47110e6559192ba04968ae 101 Pfam PF09339 IclR helix-turn-helix domain 12 57 3.2E-6 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS10690 5ca226696f47110e6559192ba04968ae 101 SUPERFAMILY SSF46785 9 78 1.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08150 b1228faec8ec5243e7b5ed6507d94118 336 Pfam PF01032 FecCD transport family 17 330 4.7E-84 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS08150 b1228faec8ec5243e7b5ed6507d94118 336 Gene3D G3DSA:1.10.3470.10 2 336 1.4E-71 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS08150 b1228faec8ec5243e7b5ed6507d94118 336 SUPERFAMILY SSF81345 3 330 1.31E-77 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS16410 d1809d1cfe316dad8297f495a42b5885 230 SUPERFAMILY SSF56784 18 228 2.34E-17 T 28-03-2018 IPR023214 HAD-like domain CI104_RS16410 d1809d1cfe316dad8297f495a42b5885 230 Pfam PF13419 Haloacid dehalogenase-like hydrolase 19 194 2.3E-10 T 28-03-2018 IPR023214 HAD-like domain CI104_RS16410 d1809d1cfe316dad8297f495a42b5885 230 Gene3D G3DSA:3.40.50.1000 79 229 2.7E-11 T 28-03-2018 IPR023214 HAD-like domain CI104_RS20145 e9b372d30fd3fe3ace3399ff6e7b6ceb 316 SUPERFAMILY SSF53822 27 308 1.06E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS20145 e9b372d30fd3fe3ace3399ff6e7b6ceb 316 Pfam PF13407 Periplasmic binding protein domain 29 283 3.8E-64 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS20145 e9b372d30fd3fe3ace3399ff6e7b6ceb 316 Gene3D G3DSA:3.40.50.2300 132 311 9.2E-40 T 28-03-2018 CI104_RS20145 e9b372d30fd3fe3ace3399ff6e7b6ceb 316 Gene3D G3DSA:3.40.50.2300 20 131 2.7E-18 T 28-03-2018 CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 38 438 1.1E-144 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 PIRSF PIRSF002808 8 444 2.4E-35 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 Pfam PF07690 Major Facilitator Superfamily 36 404 4.3E-59 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 SUPERFAMILY SSF103473 22 441 4.97E-84 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 Gene3D G3DSA:1.20.1250.20 235 444 1.3E-26 T 28-03-2018 CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 Gene3D G3DSA:1.20.1250.20 20 222 1.5E-37 T 28-03-2018 CI104_RS00050 36936079693cb00d5bab3fa921c24a79 445 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 37 420 1.1E-127 T 28-03-2018 CI104_RS12005 d8f87554abf95db19b5bde8c6ed7225b 348 Pfam PF00793 DAHP synthetase I family 43 337 2.5E-106 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS12005 d8f87554abf95db19b5bde8c6ed7225b 348 PIRSF PIRSF001361 1 348 3.4E-158 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CI104_RS12005 d8f87554abf95db19b5bde8c6ed7225b 348 SUPERFAMILY SSF51569 7 347 2.72E-131 T 28-03-2018 CI104_RS12005 d8f87554abf95db19b5bde8c6ed7225b 348 Gene3D G3DSA:3.20.20.70 7 348 5.9E-121 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS12005 d8f87554abf95db19b5bde8c6ed7225b 348 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 5 348 2.6E-173 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 PIRSF PIRSF001357 11 261 1.2E-76 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 TIGRFAM TIGR00126 deoC: deoxyribose-phosphate aldolase 17 238 1.2E-85 T 28-03-2018 IPR011343 Deoxyribose-phosphate aldolase GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180|Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 SUPERFAMILY SSF51569 12 252 3.56E-82 T 28-03-2018 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 Gene3D G3DSA:3.20.20.70 4 264 6.6E-82 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 Pfam PF01791 DeoC/LacD family aldolase 17 251 1.0E-50 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 SMART SM01133 16 252 3.6E-80 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS21180 e4319f40badbd8b0b3e6f4c4df29f73e 265 Hamap MF_00592 Deoxyribose-phosphate aldolase [deoC]. 7 265 54.095 T 28-03-2018 IPR023649 Deoxyribose-phosphate aldolase type II GO:0004139|GO:0005737|GO:0009264 KEGG: 00030+4.1.2.4|MetaCyc: PWY-7180 CI104_RS13480 66e6d78f3dba40c4f344cdb51bcb3f7d 334 Pfam PF03595 Voltage-dependent anion channel 12 309 8.0E-40 T 28-03-2018 IPR004695 Voltage-dependent anion channel GO:0016021|GO:0055085 CI104_RS13480 66e6d78f3dba40c4f344cdb51bcb3f7d 334 TIGRFAM TIGR00816 tdt: C4-dicarboxylate transporter/malic acid transport protein 13 316 6.7E-106 T 28-03-2018 IPR011552 Tellurite resistance protein TehA/malic acid transport protein GO:0016021 CI104_RS24510 c5d3dcc3d4d84907c3b929698d4839b0 472 Gene3D G3DSA:1.20.1250.20 224 440 3.0E-18 T 28-03-2018 CI104_RS24510 c5d3dcc3d4d84907c3b929698d4839b0 472 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 67 94 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CI104_RS24510 c5d3dcc3d4d84907c3b929698d4839b0 472 Gene3D G3DSA:1.20.1250.20 11 223 1.3E-11 T 28-03-2018 CI104_RS24510 c5d3dcc3d4d84907c3b929698d4839b0 472 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 16 451 3.2E-155 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS24510 c5d3dcc3d4d84907c3b929698d4839b0 472 SUPERFAMILY SSF103473 17 440 4.05E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS24510 c5d3dcc3d4d84907c3b929698d4839b0 472 Pfam PF13347 MFS/sugar transport protein 18 438 4.5E-82 T 28-03-2018 CI104_RS01395 f98b63b2efa955696674d4f0e20ce7a1 198 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 124 130 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS01395 f98b63b2efa955696674d4f0e20ce7a1 198 SUPERFAMILY SSF53335 11 189 6.9E-52 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS01395 f98b63b2efa955696674d4f0e20ce7a1 198 Gene3D G3DSA:3.40.50.150 1 198 1.3E-32 T 28-03-2018 CI104_RS01395 f98b63b2efa955696674d4f0e20ce7a1 198 TIGRFAM TIGR00095 TIGR00095: 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD 1 190 3.3E-73 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CI104_RS01395 f98b63b2efa955696674d4f0e20ce7a1 198 Pfam PF03602 Conserved hypothetical protein 95 12 188 3.3E-62 T 28-03-2018 CI104_RS01395 f98b63b2efa955696674d4f0e20ce7a1 198 PIRSF PIRSF004553 11 191 1.7E-59 T 28-03-2018 IPR004398 RNA methyltransferase, RsmD GO:0008168|GO:0031167 CI104_RS09310 49ed9fdd2efe33752043c475eb50a5cd 109 SUPERFAMILY SSF69721 2 109 2.49E-41 T 28-03-2018 IPR025526 DsrC-like domain CI104_RS09310 49ed9fdd2efe33752043c475eb50a5cd 109 TIGRFAM TIGR03342 dsrC_tusE_dsvC: sulfur relay protein, TusE/DsrC/DsvC family 4 109 9.6E-49 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CI104_RS09310 49ed9fdd2efe33752043c475eb50a5cd 109 Pfam PF04358 DsrC like protein 4 109 1.8E-44 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CI104_RS09310 49ed9fdd2efe33752043c475eb50a5cd 109 Gene3D G3DSA:1.10.10.370 40 108 8.4E-33 T 28-03-2018 CI104_RS09310 49ed9fdd2efe33752043c475eb50a5cd 109 PIRSF PIRSF006223 2 109 1.6E-45 T 28-03-2018 IPR007453 Sulphur transfer protein DsrC/TusE CI104_RS09310 49ed9fdd2efe33752043c475eb50a5cd 109 Gene3D G3DSA:3.30.1420.10 2 39 4.1E-15 T 28-03-2018 CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 Pfam PF00563 EAL domain 493 724 3.7E-59 T 28-03-2018 IPR001633 EAL domain CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 SUPERFAMILY SSF141868 493 730 6.15E-68 T 28-03-2018 IPR001633 EAL domain CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 SMART SM00052 487 729 4.9E-89 T 28-03-2018 IPR001633 EAL domain CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 Gene3D G3DSA:3.20.20.450 477 732 6.1E-70 T 28-03-2018 IPR001633 EAL domain CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 Pfam PF05231 MASE1 17 314 3.3E-46 T 28-03-2018 IPR007895 MASE1 CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 SMART SM00267 315 473 1.4E-17 T 28-03-2018 IPR000160 GGDEF domain CI104_RS18015 863bd3bd19c9533663731d4cb0f5c297 732 Gene3D G3DSA:3.30.70.270 309 460 8.3E-9 T 28-03-2018 CI104_RS20395 72c21df70b4bd32936ed99c4482a50ad 398 Pfam PF07690 Major Facilitator Superfamily 20 349 4.2E-15 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS20395 72c21df70b4bd32936ed99c4482a50ad 398 Hamap MF_01585 Lysophospholipid transporter LplT [lplT]. 1 397 39.298 T 28-03-2018 IPR023727 Lysophospholipid transporter LplT GO:0005886|GO:0051977|GO:0051978 CI104_RS20395 72c21df70b4bd32936ed99c4482a50ad 398 Gene3D G3DSA:1.20.1250.20 202 398 0.0041 T 28-03-2018 CI104_RS20395 72c21df70b4bd32936ed99c4482a50ad 398 Gene3D G3DSA:1.20.1250.20 3 197 1.1E-14 T 28-03-2018 CI104_RS20395 72c21df70b4bd32936ed99c4482a50ad 398 SUPERFAMILY SSF103473 16 396 5.49E-23 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS22595 b657a154fd5d152276f417635c58841a 322 Pfam PF02666 Phosphatidylserine decarboxylase 63 282 1.8E-58 T 28-03-2018 IPR003817 Phosphatidylserine decarboxylase-related GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CI104_RS22595 b657a154fd5d152276f417635c58841a 322 Hamap MF_00662 Phosphatidylserine decarboxylase proenzyme [psd]. 10 287 50.924 T 28-03-2018 IPR033178 Phosphatidylserine decarboxylase, prokaryotic type 1 GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669 CI104_RS22595 b657a154fd5d152276f417635c58841a 322 TIGRFAM TIGR00163 PS_decarb: phosphatidylserine decarboxylase 49 286 2.4E-101 T 28-03-2018 IPR033177 Phosphatidylserine decarboxylase GO:0004609|GO:0008654 KEGG: 00564+4.1.1.65|MetaCyc: PWY-5669|Reactome: R-HSA-1483213 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 112 132 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 167 178 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 77 93 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 98 111 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 141 158 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 7.6E-52 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 187 1.1E-76 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 Gene3D G3DSA:3.90.110.10 171 449 2.5E-68 T 28-03-2018 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 199 415 1.1E-34 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 141 172 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 SUPERFAMILY SSF51735 4 167 2.58E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 SUPERFAMILY SSF56327 173 443 3.76E-76 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CI104_RS11855 e04145c924152fc619b15d4f826c84c3 451 Gene3D G3DSA:3.40.50.720 2 169 5.4E-29 T 28-03-2018 CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 PRINTS PR00990 Ribokinase signature 33 52 1.2E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 PRINTS PR00990 Ribokinase signature 209 220 1.2E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 PRINTS PR00990 Ribokinase signature 6 27 1.2E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 SUPERFAMILY SSF53613 1 293 1.56E-65 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 Hamap MF_00999 Sulfofructose kinase. 1 298 64.731 T 28-03-2018 IPR030877 Sulfofructose kinase GO:0061594 MetaCyc: PWY-7446 CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 Gene3D G3DSA:3.40.1190.20 2 297 2.8E-63 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 Pfam PF00294 pfkB family carbohydrate kinase 2 286 1.5E-61 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS24470 1f68ddae9743785c0727ecabd70ad19e 298 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 238 251 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 ProSitePatterns PS00928 Trehalase signature 2. 451 460 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 305 322 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 196 214 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 271 288 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 337 354 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 444 460 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 521 534 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 PRINTS PR00744 Glycosyl hydrolase family 37 signature 380 396 4.7E-49 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 SUPERFAMILY SSF48208 44 544 3.74E-174 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 Hamap MF_01060 Periplasmic trehalase [treA]. 2 539 83.536 T 28-03-2018 IPR023720 Trehalase, periplasmic GO:0004555|GO:0005993|GO:0042597|GO:0071474 KEGG: 00500+3.2.1.28 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 Gene3D G3DSA:1.50.10.10 38 544 2.9E-157 T 28-03-2018 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 ProSitePatterns PS00927 Trehalase signature 1. 154 167 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS14590 4387d59e9b993e5393ecc7769ba3ca0c 568 Pfam PF01204 Trehalase 61 537 1.4E-173 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS00495 e61cf8c6e6201a76ca58b7ba36c011c3 213 Pfam PF00156 Phosphoribosyl transferase domain 48 159 1.6E-11 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CI104_RS00495 e61cf8c6e6201a76ca58b7ba36c011c3 213 SUPERFAMILY SSF53271 2 208 1.92E-51 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS00495 e61cf8c6e6201a76ca58b7ba36c011c3 213 TIGRFAM TIGR00336 pyrE: orotate phosphoribosyltransferase 10 187 4.9E-72 T 28-03-2018 IPR004467 Orotate phosphoribosyl transferase domain GO:0004588 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS00495 e61cf8c6e6201a76ca58b7ba36c011c3 213 Gene3D G3DSA:3.40.50.2020 1 193 2.4E-49 T 28-03-2018 CI104_RS00495 e61cf8c6e6201a76ca58b7ba36c011c3 213 Hamap MF_01208 Orotate phosphoribosyltransferase [pyrE]. 1 213 37.02 T 28-03-2018 IPR023031 Orotate phosphoribosyltransferase GO:0004588|GO:0006221 KEGG: 00240+2.4.2.10|KEGG: 00983+2.4.2.10|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS17610 0ef40fbb96b75340b1e8faab4dcc0ded 276 SUPERFAMILY SSF52518 4 268 1.28E-79 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS17610 0ef40fbb96b75340b1e8faab4dcc0ded 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 8 261 2.6E-46 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS17610 0ef40fbb96b75340b1e8faab4dcc0ded 276 Gene3D G3DSA:3.40.50.970 1 270 1.9E-66 T 28-03-2018 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 SUPERFAMILY SSF50129 2 184 4.41E-43 T 28-03-2018 IPR011032 GroES-like CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 Gene3D G3DSA:3.90.180.10 2 184 1.6E-47 T 28-03-2018 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 172 199 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 SUPERFAMILY SSF51735 142 305 9.17E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 Gene3D G3DSA:3.40.50.20 185 256 8.5E-18 T 28-03-2018 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 SMART SM00829 13 335 1.1E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 Pfam PF00107 Zinc-binding dehydrogenase 179 299 7.3E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 Gene3D G3DSA:3.90.180.10 259 337 0.07 T 28-03-2018 CI104_RS21935 3788b00b0d7e3d3ca4d2ddc8ff6693e4 339 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 137 1.9E-25 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS19560 bea2d0806e8ad8030f16ad4867df00a2 143 TIGRFAM TIGR00778 ahpD_dom: alkylhydroperoxidase AhpD family core domain 29 77 2.7E-15 T 28-03-2018 IPR004675 Alkylhydroperoxidase AhpD core GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CI104_RS19560 bea2d0806e8ad8030f16ad4867df00a2 143 SUPERFAMILY SSF69118 8 143 3.43E-41 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS19560 bea2d0806e8ad8030f16ad4867df00a2 143 Pfam PF02627 Carboxymuconolactone decarboxylase family 13 94 1.3E-19 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CI104_RS19560 bea2d0806e8ad8030f16ad4867df00a2 143 Gene3D G3DSA:1.20.1290.10 2 143 1.6E-33 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 SUPERFAMILY SSF52374 403 648 6.26E-137 T 28-03-2018 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 SUPERFAMILY SSF52374 4 202 6.26E-137 T 28-03-2018 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Gene3D G3DSA:3.90.740.10 195 395 1.3E-66 T 28-03-2018 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Pfam PF06827 Zinc finger found in FPG and IleRS 898 926 9.2E-9 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 526 539 9.7E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 238 261 9.7E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 51 62 9.7E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 401 416 9.7E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 PRINTS PR00984 Isoleucyl-tRNA synthetase signature 561 570 9.7E-33 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 SUPERFAMILY SSF47323 652 929 1.64E-77 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 58 69 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Pfam PF08264 Anticodon-binding domain of tRNA 685 840 3.5E-29 T 28-03-2018 IPR013155 Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding GO:0000166|GO:0006418 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Pfam PF00133 tRNA synthetases class I (I, L, M and V) 28 640 9.8E-233 T 28-03-2018 IPR002300 Aminoacyl-tRNA synthetase, class Ia GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Hamap MF_02002 Isoleucine--tRNA ligase [ileS]. 2 929 21.465 T 28-03-2018 IPR023585 Isoleucine-tRNA ligase, type 1 GO:0004822 KEGG: 00970+6.1.1.5|Reactome: R-HSA-379726 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 TIGRFAM TIGR00392 ileS: isoleucine--tRNA ligase 15 843 0.0 T 28-03-2018 IPR002301 Isoleucine-tRNA ligase GO:0000166|GO:0004822|GO:0005524|GO:0005737|GO:0006428 KEGG: 00970+6.1.1.5 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Gene3D G3DSA:3.30.2320.20 802 896 3.9E-25 T 28-03-2018 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 SUPERFAMILY SSF50677 204 403 1.57E-55 T 28-03-2018 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain GO:0002161|GO:0006418 CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Gene3D G3DSA:3.40.50.620 42 122 6.7E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Gene3D G3DSA:3.40.50.620 396 655 5.4E-47 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS04545 9b085ffa7013d963cab81753a424af27 938 Gene3D G3DSA:1.10.730.10 656 790 7.0E-31 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 SUPERFAMILY SSF53474 35 167 1.62E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 SUPERFAMILY SSF53474 250 329 1.62E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 149 162 5.4E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 262 276 5.4E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 81 96 5.4E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 PRINTS PR00111 Alpha/beta hydrolase fold signature 135 148 5.4E-5 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 Pfam PF12146 Serine aminopeptidase, S33 52 312 6.3E-57 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CI104_RS24745 0a113e08beeddd69773ee3534f882692 340 Gene3D G3DSA:3.40.50.1820 24 338 1.5E-34 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS02530 97c44c206922fb3b1ebb40f0ca859d34 87 SUPERFAMILY SSF159871 3 87 4.71E-27 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS02530 97c44c206922fb3b1ebb40f0ca859d34 87 Gene3D G3DSA:3.30.1660.10 22 87 1.9E-24 T 28-03-2018 IPR025543 Dodecin-like CI104_RS02530 97c44c206922fb3b1ebb40f0ca859d34 87 Pfam PF07338 Protein of unknown function (DUF1471) 35 87 4.5E-21 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 Hamap MF_01105 Amino-acid acetyltransferase [argA]. 1 442 234.145 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 PIRSF PIRSF000423 1 442 3.4E-209 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 Pfam PF00583 Acetyltransferase (GNAT) family 336 413 7.6E-7 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 Gene3D G3DSA:3.40.1160.10 7 294 6.4E-55 T 28-03-2018 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 Gene3D G3DSA:3.40.630.30 297 442 9.1E-20 T 28-03-2018 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 TIGRFAM TIGR01890 N-Ac-Glu-synth: amino-acid N-acetyltransferase 9 442 2.2E-197 T 28-03-2018 IPR010167 Amino-acid N-acetyltransferase GO:0004042|GO:0005737|GO:0006526 KEGG: 00220+2.3.1.1|MetaCyc: PWY-5154 CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 Pfam PF00696 Amino acid kinase family 26 268 5.1E-32 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 SUPERFAMILY SSF53633 5 291 6.28E-70 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS20305 e5311d58de706c2079076c291f975ca4 443 SUPERFAMILY SSF55729 297 418 4.87E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 Gene3D G3DSA:1.10.10.60 59 87 1.9E-13 T 28-03-2018 CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 Gene3D G3DSA:1.10.260.40 88 200 0.2 T 28-03-2018 CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 SUPERFAMILY SSF53098 229 375 3.22E-25 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 Pfam PF00665 Integrase core domain 230 336 6.4E-14 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 Gene3D G3DSA:3.30.420.10 223 381 1.2E-20 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 Gene3D G3DSA:1.10.10.10 1 58 6.8E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 Pfam PF13936 Helix-turn-helix domain 58 98 3.5E-18 T 28-03-2018 IPR025246 Transposase IS30-like HTH domain CI104_RS28000 94bf6eb97940f626a1b0270a738bf58a 383 ProSitePatterns PS01043 Transposases, IS30 family, signature. 323 339 - T 28-03-2018 IPR001598 Transposase, IS30, conserved site GO:0003677|GO:0004803|GO:0006313 CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 Gene3D G3DSA:3.40.50.300 8 263 1.9E-53 T 28-03-2018 CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 Pfam PF00005 ABC transporter 280 431 1.1E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 Pfam PF00005 ABC transporter 27 169 1.7E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 SUPERFAMILY SSF52540 10 230 4.86E-56 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 SUPERFAMILY SSF52540 267 480 4.21E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 SMART SM00382 288 480 9.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 SMART SM00382 36 217 2.0E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 ProSitePatterns PS00211 ABC transporters family signature. 404 418 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS21690 5cf4bc613856f4d88e4404fda9933d02 517 Gene3D G3DSA:3.40.50.300 273 491 1.2E-38 T 28-03-2018 CI104_RS17150 d6fb3e156987c71911bf0968a2db5bdb 200 Pfam PF03264 NapC/NirT cytochrome c family, N-terminal region 22 193 6.4E-78 T 28-03-2018 IPR005126 NapC/NirT cytochrome c, N-terminal CI104_RS17150 d6fb3e156987c71911bf0968a2db5bdb 200 PIRSF PIRSF000013 1 200 8.3E-107 T 28-03-2018 IPR024717 Denitrification system component NapC/NirT/NrfH GO:0016021|GO:0019333|GO:0020037 CI104_RS17150 d6fb3e156987c71911bf0968a2db5bdb 200 TIGRFAM TIGR02161 napC_nirT: periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family 11 194 4.9E-105 T 28-03-2018 IPR011885 Periplasmic nitrate reductase c-type cytochrome, NapC/NirT GO:0016021|GO:0019333|GO:0020037 CI104_RS17150 d6fb3e156987c71911bf0968a2db5bdb 200 SUPERFAMILY SSF48695 17 197 3.77E-65 T 28-03-2018 IPR011031 Multihaem cytochrome CI104_RS17150 d6fb3e156987c71911bf0968a2db5bdb 200 Gene3D G3DSA:1.10.468.10 45 198 1.6E-29 T 28-03-2018 CI104_RS03720 aaffb837d6e32631b4fb253c71f8ede8 487 PIRSF PIRSF002457 2 487 4.3E-131 T 28-03-2018 IPR030676 Citrate carrier CitT-related CI104_RS03720 aaffb837d6e32631b4fb253c71f8ede8 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 482 4.2E-166 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS03720 aaffb837d6e32631b4fb253c71f8ede8 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 486 6.6E-181 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 SUPERFAMILY SSF51658 4 438 6.58E-173 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 Gene3D G3DSA:3.20.20.150 2 440 6.9E-110 T 28-03-2018 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 133 153 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 180 201 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 229 253 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 156 175 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 207 226 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 300 311 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 271 298 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 92 114 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 PRINTS PR00688 Xylose isomerase signature 333 344 1.3E-84 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 TIGRFAM TIGR02630 xylose_isom_A: xylose isomerase 4 437 2.3E-218 T 28-03-2018 IPR013452 Xylose isomerase, bacterial-type GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS00835 9bb3cc95d50903e661047eb918d3c6cd 440 Hamap MF_00455 Xylose isomerase [xylA]. 11 437 53.532 T 28-03-2018 IPR001998 Xylose isomerase GO:0005975|GO:0009045 KEGG: 00040+5.3.1.5|KEGG: 00051+5.3.1.5 CI104_RS08515 e2c5bc825b76d8b6ae6514dfbeef5c91 306 Pfam PF03734 L,D-transpeptidase catalytic domain 101 231 1.8E-17 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CI104_RS08515 e2c5bc825b76d8b6ae6514dfbeef5c91 306 SUPERFAMILY SSF141523 177 233 2.49E-26 T 28-03-2018 CI104_RS08515 e2c5bc825b76d8b6ae6514dfbeef5c91 306 SUPERFAMILY SSF141523 99 149 2.49E-26 T 28-03-2018 CI104_RS08515 e2c5bc825b76d8b6ae6514dfbeef5c91 306 Gene3D G3DSA:2.40.440.10 94 233 4.6E-28 T 28-03-2018 CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 SUPERFAMILY SSF64288 75 246 1.38E-39 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 Gene3D G3DSA:1.10.10.10 4 89 5.2E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 SUPERFAMILY SSF46785 18 90 1.01E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 Gene3D G3DSA:3.40.1410.10 93 247 2.1E-35 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 SMART SM00345 28 87 8.8E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 61 8.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 61 77 8.6E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 Pfam PF07702 UTRA domain 108 242 1.2E-35 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 SMART SM00866 107 243 4.8E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS16670 a89e3980d66045fd1a48156ec92cb68a 248 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 87 3.5E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 325 480 4.4E-52 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 SMART SM00283 265 512 1.2E-92 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 ProSitePatterns PS00538 Bacterial chemotaxis sensory transducers signature. 290 312 - T 28-03-2018 IPR004091 Chemotaxis methyl-accepting receptor, methyl-accepting site CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 Pfam PF02203 Tar ligand binding domain homologue 4 165 6.3E-11 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 SMART SM00304 212 264 9.1E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 SUPERFAMILY SSF58104 232 517 4.32E-73 T 28-03-2018 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 7 32 1.1E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 1.1E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 1.1E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 1.1E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 1.1E-56 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 Gene3D G3DSA:1.10.287.950 322 516 3.5E-47 T 28-03-2018 CI104_RS04010 04f5b5cc5b78a45696f536f90ff0b024 546 Gene3D G3DSA:1.10.287.950 87 321 1.4E-20 T 28-03-2018 CI104_RS02810 865a070f093c933e31cc6641f22f1e27 209 Gene3D G3DSA:3.40.50.150 1 209 5.5E-59 T 28-03-2018 CI104_RS02810 865a070f093c933e31cc6641f22f1e27 209 Pfam PF01728 FtsJ-like methyltransferase 31 206 1.3E-58 T 28-03-2018 IPR002877 Ribosomal RNA methyltransferase FtsJ domain GO:0008168|GO:0032259 CI104_RS02810 865a070f093c933e31cc6641f22f1e27 209 TIGRFAM TIGR00438 rrmJ: ribosomal RNA large subunit methyltransferase J 20 206 9.4E-97 T 28-03-2018 IPR004512 Ribosomal RNA methyltransferase E, gammaproteobacteria GO:0006364|GO:0016436 KEGG: 00564+2.1.1.16 CI104_RS02810 865a070f093c933e31cc6641f22f1e27 209 Hamap MF_01547 Ribosomal RNA large subunit methyltransferase E [rlmE]. 15 208 27.971 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CI104_RS02810 865a070f093c933e31cc6641f22f1e27 209 PIRSF PIRSF005461 1 209 1.4E-82 T 28-03-2018 IPR015507 Ribosomal RNA large subunit methyltransferase E GO:0001510|GO:0008168 KEGG: 00564+2.1.1.16 CI104_RS02810 865a070f093c933e31cc6641f22f1e27 209 SUPERFAMILY SSF53335 31 208 7.4E-44 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS22405 3e454b2122e4ca58ada7ed4bd4059f80 309 Pfam PF00892 EamA-like transporter family 172 305 2.9E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS22405 3e454b2122e4ca58ada7ed4bd4059f80 309 Pfam PF00892 EamA-like transporter family 17 159 1.8E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS22405 3e454b2122e4ca58ada7ed4bd4059f80 309 SUPERFAMILY SSF103481 205 306 4.97E-7 T 28-03-2018 CI104_RS22405 3e454b2122e4ca58ada7ed4bd4059f80 309 SUPERFAMILY SSF103481 57 161 1.57E-13 T 28-03-2018 CI104_RS18370 b2515609a3bc51498216c41751c502eb 66 Hamap MF_01566 UPF0370 protein YpfN [ypfN]. 1 63 27.796 T 28-03-2018 IPR020910 Uncharacterised protein family UPF0370 CI104_RS18370 b2515609a3bc51498216c41751c502eb 66 Pfam PF13980 Uncharacterised protein family (UPF0370) 1 62 1.2E-34 T 28-03-2018 IPR020910 Uncharacterised protein family UPF0370 CI104_RS03115 a826159e99c44b0ad2e5da870dff4271 523 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 119 521 3.5E-145 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CI104_RS03115 a826159e99c44b0ad2e5da870dff4271 523 TIGRFAM TIGR03248 galactar-dH20: galactarate dehydratase 15 523 1.3E-281 T 28-03-2018 IPR017654 Galactarate dehydratase GarD-like GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CI104_RS03115 a826159e99c44b0ad2e5da870dff4271 523 SMART SM00858 22 92 3.4E-14 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS03115 a826159e99c44b0ad2e5da870dff4271 523 Pfam PF08666 SAF domain 22 92 3.0E-14 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS03115 a826159e99c44b0ad2e5da870dff4271 523 Hamap MF_02031 Galactarate dehydratase (L-threo-forming) [garD]. 2 523 79.965 T 28-03-2018 IPR032893 Galactarate dehydratase (L-threo-forming) GarD, Enterobacteriaceae GO:0008867|GO:0046392 KEGG: 00053+4.2.1.42|MetaCyc: PWY-6497 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 ProSitePatterns PS01271 Sodium:sulfate symporter family signature. 558 574 - T 28-03-2018 IPR031312 Sodium/sulphate symporter, conserved site Reactome: R-HSA-433137 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 Gene3D G3DSA:3.30.70.1450 323 397 3.6E-15 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 Gene3D G3DSA:3.30.70.1450 217 306 2.3E-12 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 Pfam PF02080 TrkA-C domain 231 303 6.7E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 Pfam PF02080 TrkA-C domain 326 390 2.3E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 SUPERFAMILY SSF116726 231 292 2.49E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 SUPERFAMILY SSF116726 322 393 3.14E-16 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 Pfam PF03600 Citrate transporter 430 607 1.6E-20 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CI104_RS17570 01049e39e9c716aae1f7c7881062f3d9 610 Pfam PF03600 Citrate transporter 16 200 1.7E-38 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CI104_RS06305 ddc03046352573f75d5d0f901880c86f 299 Gene3D G3DSA:1.10.600.10 265 299 1.6E-4 T 28-03-2018 IPR008949 Isoprenoid synthase domain CI104_RS06305 ddc03046352573f75d5d0f901880c86f 299 Gene3D G3DSA:1.10.600.10 1 264 5.9E-83 T 28-03-2018 IPR008949 Isoprenoid synthase domain CI104_RS06305 ddc03046352573f75d5d0f901880c86f 299 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 215 227 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CI104_RS06305 ddc03046352573f75d5d0f901880c86f 299 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 97 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CI104_RS06305 ddc03046352573f75d5d0f901880c86f 299 Pfam PF00348 Polyprenyl synthetase 34 269 2.4E-56 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CI104_RS06305 ddc03046352573f75d5d0f901880c86f 299 SUPERFAMILY SSF48576 1 278 4.32E-88 T 28-03-2018 IPR008949 Isoprenoid synthase domain CI104_RS02770 00eba428dbaa8df9ab1edb05489fa29c 323 SUPERFAMILY SSF48576 6 322 2.59E-100 T 28-03-2018 IPR008949 Isoprenoid synthase domain CI104_RS02770 00eba428dbaa8df9ab1edb05489fa29c 323 ProSitePatterns PS00444 Polyprenyl synthases signature 2. 203 215 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CI104_RS02770 00eba428dbaa8df9ab1edb05489fa29c 323 Pfam PF00348 Polyprenyl synthetase 30 263 1.4E-76 T 28-03-2018 IPR000092 Polyprenyl synthetase GO:0008299 CI104_RS02770 00eba428dbaa8df9ab1edb05489fa29c 323 ProSitePatterns PS00723 Polyprenyl synthases signature 1. 81 95 - T 28-03-2018 IPR033749 Polyprenyl synthetase, conserved site CI104_RS02770 00eba428dbaa8df9ab1edb05489fa29c 323 Gene3D G3DSA:1.10.600.10 1 323 1.1E-103 T 28-03-2018 IPR008949 Isoprenoid synthase domain CI104_RS03455 fbe81ed5788dd5b19f36d1ec780b48de 75 SUPERFAMILY SSF57716 34 71 9.98E-9 T 28-03-2018 CI104_RS03455 fbe81ed5788dd5b19f36d1ec780b48de 75 TIGRFAM TIGR02419 C4_traR_proteo: phage/conjugal plasmid C-4 type zinc finger protein, TraR family 3 64 4.7E-19 T 28-03-2018 IPR012783 Zinc finger, C4 DksA/TraR-type CI104_RS03455 fbe81ed5788dd5b19f36d1ec780b48de 75 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 32 64 2.6E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CI104_RS05445 310109205c710535d246eb5b144b4b4d 217 Gene3D G3DSA:1.10.3720.10 1 217 8.9E-40 T 28-03-2018 CI104_RS05445 310109205c710535d246eb5b144b4b4d 217 SUPERFAMILY SSF161098 9 201 8.76E-48 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS05445 310109205c710535d246eb5b144b4b4d 217 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 212 3.6E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12380 6f8bb24e049e46860bbb0a4e3ff964cc 277 Gene3D G3DSA:3.90.1720.10 140 277 6.6E-38 T 28-03-2018 CI104_RS12380 6f8bb24e049e46860bbb0a4e3ff964cc 277 Pfam PF00877 NlpC/P60 family 159 269 3.9E-32 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CI104_RS12380 6f8bb24e049e46860bbb0a4e3ff964cc 277 SUPERFAMILY SSF54001 139 271 1.37E-41 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 253 275 8.7E-20 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 5 24 8.7E-20 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 143 161 8.7E-20 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 228 244 8.7E-20 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 100 118 8.7E-20 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 Hamap MF_01313 Nitric oxide reductase FlRd-NAD(+) reductase [norW]. 1 377 55.618 T 28-03-2018 IPR023961 Nitric oxide reductase FlRd-NAD(+) reductase GO:0016731|GO:0055114 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 Gene3D G3DSA:3.50.50.60 102 237 9.5E-27 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 278 6.8E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 Gene3D G3DSA:3.50.50.60 239 307 1.7E-5 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 SUPERFAMILY SSF51905 3 301 1.23E-34 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 Gene3D G3DSA:3.50.50.60 2 101 1.4E-7 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 268 275 1.0E-14 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 4 26 1.0E-14 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 143 168 1.0E-14 T 28-03-2018 CI104_RS19760 412aed7ebea78eebcb01b5cabd242dc4 377 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 229 243 1.0E-14 T 28-03-2018 CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 Gene3D G3DSA:3.40.50.10330 6 132 1.9E-25 T 28-03-2018 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 GO:0003951|GO:0008152 CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 SMART SM00046 6 132 4.1E-29 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 Hamap MF_01377 Probable lipid kinase YegS [yegS]. 6 299 44.57 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 TIGRFAM TIGR00147 TIGR00147: lipid kinase, YegS/Rv2252/BmrU family 1 293 2.4E-115 T 28-03-2018 IPR005218 Diacylglycerol/lipid kinase CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 Pfam PF00781 Diacylglycerol kinase catalytic domain 8 129 2.2E-27 T 28-03-2018 IPR001206 Diacylglycerol kinase, catalytic domain GO:0016301 CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 TIGRFAM TIGR03702 lip_kinase_YegS: lipid kinase YegS 7 298 3.1E-142 T 28-03-2018 IPR022433 Lipid kinase YegS GO:0001727|GO:0046872 CI104_RS16640 2ec93ff732d8843a756f919e435ae4da 299 SUPERFAMILY SSF111331 6 296 1.11E-69 T 28-03-2018 IPR016064 NAD kinase/diacylglycerol kinase-like domain CI104_RS14000 3ce7e5e0ec9813ab319b34a357a60c08 547 PIRSF PIRSF002741 1 542 4.8E-94 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS14000 3ce7e5e0ec9813ab319b34a357a60c08 547 Gene3D G3DSA:3.10.105.10 305 510 3.3E-53 T 28-03-2018 CI104_RS14000 3ce7e5e0ec9813ab319b34a357a60c08 547 Gene3D G3DSA:3.40.190.10 209 304 3.1E-23 T 28-03-2018 CI104_RS14000 3ce7e5e0ec9813ab319b34a357a60c08 547 Gene3D G3DSA:3.90.76.10 45 208 1.8E-35 T 28-03-2018 CI104_RS14000 3ce7e5e0ec9813ab319b34a357a60c08 547 SUPERFAMILY SSF53850 36 537 1.01E-133 T 28-03-2018 CI104_RS14000 3ce7e5e0ec9813ab319b34a357a60c08 547 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 79 458 4.7E-83 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 ProSitePatterns PS00622 LuxR-type HTH domain signature. 156 183 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 Gene3D G3DSA:1.10.10.10 35 199 6.1E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 172 184 1.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 172 1.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 142 156 1.4E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 SUPERFAMILY SSF46894 131 198 1.12E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 Pfam PF00196 Bacterial regulatory proteins, luxR family 141 195 1.2E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01130 e7b2f5bf260a19f2c642ea4c2770021d 199 SMART SM00421 139 196 3.1E-21 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 Gene3D G3DSA:3.55.30.10 1 176 5.4E-62 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 Gene3D G3DSA:1.10.287.480 181 225 2.5E-20 T 28-03-2018 IPR023212 Heat shock protein Hsp33, helix hairpin bin domain CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 Gene3D G3DSA:3.90.1280.10 226 281 1.4E-24 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 SUPERFAMILY SSF118352 225 283 1.01E-19 T 28-03-2018 IPR016154 Heat shock protein Hsp33, C-terminal GO:0005737|GO:0006457|GO:0051082 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 Hamap MF_00117 33 kDa chaperonin [hslO]. 4 284 33.857 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 SUPERFAMILY SSF64397 4 232 1.31E-76 T 28-03-2018 IPR016153 Heat shock protein Hsp33, N-terminal GO:0005737|GO:0006457|GO:0051082 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 PIRSF PIRSF005261 1 285 8.0E-73 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CI104_RS01735 66da549d1f3b84b2cce1b3570bced9f3 292 Pfam PF01430 Hsp33 protein 5 272 1.0E-85 T 28-03-2018 IPR000397 Heat shock protein Hsp33 GO:0005737|GO:0006457|GO:0051082 CI104_RS22740 585a36891ebd91ec45f837c1e23d9ec1 68 SUPERFAMILY SSF47345 2 66 1.57E-21 T 28-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 CI104_RS22740 585a36891ebd91ec45f837c1e23d9ec1 68 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 22 38 3.0E-14 T 28-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 CI104_RS22740 585a36891ebd91ec45f837c1e23d9ec1 68 PRINTS PR01299 Colicin E2 (pyocin) immunity protein signature 45 66 3.0E-14 T 28-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 CI104_RS22740 585a36891ebd91ec45f837c1e23d9ec1 68 Gene3D G3DSA:1.10.1200.20 1 67 5.4E-22 T 28-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 CI104_RS22740 585a36891ebd91ec45f837c1e23d9ec1 68 ProDom PD007225 IMMUNITY COLICIN BACTERIOCIN PLASMID PROTEIN/PYOCIN ORFU3 ORFU1 PYOCIN 3D-STRUCTURE GENES 1 66 7.0E-24 T 28-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 CI104_RS22740 585a36891ebd91ec45f837c1e23d9ec1 68 Pfam PF01320 Colicin immunity protein / pyocin immunity protein 1 66 1.9E-23 T 28-03-2018 IPR000290 Colicin immunity protein/pyocin immunity protein GO:0015643|GO:0030153 CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 ProSitePatterns PS00211 ABC transporters family signature. 143 157 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 222 287 1.2E-15 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 Pfam PF00005 ABC transporter 32 171 6.5E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 SMART SM00382 41 220 5.1E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 220 305 1.2E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 SUPERFAMILY SSF52540 6 241 1.81E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13100 5b51b91ce18720cbab0dfa9efb78a52e 307 Gene3D G3DSA:3.40.50.300 2 307 2.8E-69 T 28-03-2018 CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 SMART SM00062 42 263 9.6E-68 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 SMART SM00079 42 262 1.4E-4 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 Gene3D G3DSA:3.40.190.10 185 273 1.9E-11 T 28-03-2018 CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 43 261 9.8E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 66 79 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 SUPERFAMILY SSF53850 14 262 5.44E-68 T 28-03-2018 CI104_RS12280 ea9d5aef0c611ad9fe0dccb2ecc8a39d 277 Gene3D G3DSA:3.40.190.10 31 184 5.5E-45 T 28-03-2018 CI104_RS17220 5871967d32fb7a9f6674f41d84a26b89 351 Gene3D G3DSA:3.10.520.10 39 339 1.3E-51 T 28-03-2018 CI104_RS17220 5871967d32fb7a9f6674f41d84a26b89 351 SUPERFAMILY SSF143631 35 346 2.25E-93 T 28-03-2018 IPR003374 ApbE-like domain CI104_RS17220 5871967d32fb7a9f6674f41d84a26b89 351 Pfam PF02424 ApbE family 42 325 1.0E-77 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CI104_RS17220 5871967d32fb7a9f6674f41d84a26b89 351 PIRSF PIRSF006268 1 347 4.1E-88 T 28-03-2018 IPR024932 Flavin transferase ApbE GO:0017013 CI104_RS26670 9aa892c20f62c15070d6e8eab846cb5d 97 Gene3D G3DSA:3.30.1190.10 35 96 1.4E-13 T 28-03-2018 CI104_RS26670 9aa892c20f62c15070d6e8eab846cb5d 97 Gene3D G3DSA:1.10.10.10 5 34 0.0012 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26670 9aa892c20f62c15070d6e8eab846cb5d 97 SUPERFAMILY SSF47413 9 72 2.47E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS26670 9aa892c20f62c15070d6e8eab846cb5d 97 Pfam PF01381 Helix-turn-helix 21 69 1.8E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS26670 9aa892c20f62c15070d6e8eab846cb5d 97 SMART SM00530 16 71 1.6E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS15315 60364a7554ed3ea53afa52cec180d6c3 603 Pfam PF00920 Dehydratase family 66 598 3.5E-160 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS15315 60364a7554ed3ea53afa52cec180d6c3 603 SUPERFAMILY SSF143975 1 418 1.15E-146 T 28-03-2018 CI104_RS15315 60364a7554ed3ea53afa52cec180d6c3 603 TIGRFAM TIGR01196 edd: phosphogluconate dehydratase 3 601 0.0 T 28-03-2018 IPR004786 6-phosphogluconate dehydratase GO:0004456|GO:0009255 KEGG: 00030+4.2.1.12 CI104_RS15315 60364a7554ed3ea53afa52cec180d6c3 603 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 505 516 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS15315 60364a7554ed3ea53afa52cec180d6c3 603 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 154 164 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS15315 60364a7554ed3ea53afa52cec180d6c3 603 SUPERFAMILY SSF52016 419 600 1.02E-57 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS17895 428ecac370276994c6c728dd2746d289 240 PIRSF PIRSF039085 1 240 1.8E-116 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS17895 428ecac370276994c6c728dd2746d289 240 Gene3D G3DSA:3.40.50.300 1 239 5.5E-76 T 28-03-2018 CI104_RS17895 428ecac370276994c6c728dd2746d289 240 Pfam PF00005 ABC transporter 17 165 4.5E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS17895 428ecac370276994c6c728dd2746d289 240 SMART SM00382 26 213 4.6E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17895 428ecac370276994c6c728dd2746d289 240 SUPERFAMILY SSF52540 1 235 4.71E-80 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17895 428ecac370276994c6c728dd2746d289 240 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS12040 88cbf84a0e16c75e5b958451dfb41aa2 255 Pfam PF01012 Electron transfer flavoprotein domain 29 207 3.2E-36 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS12040 88cbf84a0e16c75e5b958451dfb41aa2 255 SMART SM00893 23 212 3.6E-32 T 28-03-2018 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal Reactome: R-HSA-611105 CI104_RS12040 88cbf84a0e16c75e5b958451dfb41aa2 255 ProSitePatterns PS01065 Electron transfer flavoprotein beta-subunit signature. 156 176 - T 28-03-2018 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CI104_RS12040 88cbf84a0e16c75e5b958451dfb41aa2 255 PIRSF PIRSF000090 1 255 7.6E-61 T 28-03-2018 IPR012255 Electron transfer flavoprotein, beta subunit GO:0009055 Reactome: R-HSA-611105|Reactome: R-HSA-8876725 CI104_RS12040 88cbf84a0e16c75e5b958451dfb41aa2 255 Gene3D G3DSA:3.40.50.620 1 254 2.9E-50 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS12040 88cbf84a0e16c75e5b958451dfb41aa2 255 SUPERFAMILY SSF52402 1 251 1.35E-54 T 28-03-2018 CI104_RS10195 275713fd625b93007a22ddbfb59a290a 375 Pfam PF09375 Imelysin 135 367 2.1E-43 T 28-03-2018 IPR018976 Peptidase M75, Imelysin CI104_RS10195 275713fd625b93007a22ddbfb59a290a 375 Pfam PF13473 Cupredoxin-like domain 14 115 2.9E-24 T 28-03-2018 IPR028096 EfeO-type cupredoxin-like domain CI104_RS10195 275713fd625b93007a22ddbfb59a290a 375 SUPERFAMILY SSF49503 16 116 1.04E-5 T 28-03-2018 IPR008972 Cupredoxin CI104_RS10195 275713fd625b93007a22ddbfb59a290a 375 Gene3D G3DSA:3.90.20.10 152 369 0.0014 T 28-03-2018 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Pfam PF09371 Tex-like protein N-terminal domain 10 193 3.9E-69 T 28-03-2018 IPR018974 Tex-like protein, N-terminal CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SMART SM00316 649 720 1.0E-26 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Pfam PF00575 S1 RNA binding domain 649 720 4.3E-24 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SUPERFAMILY SSF47781 560 632 2.67E-19 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SUPERFAMILY SSF158832 2 322 9.94E-121 T 28-03-2018 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SUPERFAMILY SSF50249 638 722 3.65E-25 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Gene3D G3DSA:2.40.50.140 643 725 8.0E-26 T 28-03-2018 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Gene3D G3DSA:1.10.150.310 499 630 1.3E-43 T 28-03-2018 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SMART SM00732 327 424 2.5E-35 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Pfam PF12836 Helix-hairpin-helix motif 491 555 7.0E-28 T 28-03-2018 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SUPERFAMILY SSF53098 323 469 9.1E-49 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Gene3D G3DSA:1.10.3500.10 103 360 1.8E-76 T 28-03-2018 IPR023323 Tex-like domain CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Gene3D G3DSA:1.10.10.650 3 102 2.4E-33 T 28-03-2018 IPR023319 Tex-like protein, HTH domain CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Gene3D G3DSA:1.10.3500.10 361 498 2.8E-39 T 28-03-2018 IPR023323 Tex-like domain CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 Pfam PF16921 Tex protein YqgF-like domain 328 451 3.9E-50 T 28-03-2018 IPR032639 Tex protein, YqgF-like domain CI104_RS01710 e8abea177f88a108e0a9311fa7ee68d3 772 SUPERFAMILY SSF47781 470 558 1.11E-27 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS26825 709c4efb7adf715ce851e85808a54272 401 PIRSF PIRSF004810 2 401 5.3E-133 T 28-03-2018 IPR014047 Chromate transporter, long chain CI104_RS26825 709c4efb7adf715ce851e85808a54272 401 TIGRFAM TIGR00937 2A51: chromate efflux transporter 18 394 7.3E-105 T 28-03-2018 IPR014047 Chromate transporter, long chain CI104_RS26825 709c4efb7adf715ce851e85808a54272 401 Pfam PF02417 Chromate transporter 229 395 3.0E-40 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CI104_RS26825 709c4efb7adf715ce851e85808a54272 401 Pfam PF02417 Chromate transporter 12 177 3.0E-34 T 28-03-2018 IPR003370 Chromate transporter GO:0015109|GO:0015703 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 152 168 4.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 168 180 4.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 138 152 4.8E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 Pfam PF00196 Bacterial regulatory proteins, luxR family 137 191 2.3E-19 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 ProSitePatterns PS00622 LuxR-type HTH domain signature. 152 179 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 Gene3D G3DSA:1.10.10.10 55 197 2.0E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 SUPERFAMILY SSF46894 130 186 7.48E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 SMART SM00421 135 192 2.0E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15910 ccdcba68cd5758bf14074fc97321eb9f 207 Hamap MF_00982 Transcriptional regulatory protein RcsA [rcsA]. 1 207 49.557 T 28-03-2018 IPR030866 Transcriptional regulatory protein RcsA GO:0006355 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 SUPERFAMILY SSF53738 305 446 3.06E-32 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Gene3D G3DSA:3.40.120.10 12 213 4.3E-47 T 28-03-2018 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 SUPERFAMILY SSF53738 26 235 1.37E-49 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Pfam PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II 210 317 2.4E-20 T 28-03-2018 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II GO:0005975 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 ProSitePatterns PS00710 Phosphoglucomutase and phosphomannomutase phosphoserine signature. 140 149 - T 28-03-2018 IPR016066 Alpha-D-phosphohexomutase, conserved site GO:0000287 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Gene3D G3DSA:3.40.120.10 214 331 3.1E-21 T 28-03-2018 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 40 179 2.9E-36 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Pfam PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III 320 440 1.2E-30 T 28-03-2018 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 SUPERFAMILY SSF55957 433 544 1.1E-19 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 SUPERFAMILY SSF53738 209 317 2.59E-8 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Gene3D G3DSA:3.30.310.50 443 546 3.2E-20 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Gene3D G3DSA:3.40.120.10 332 442 2.1E-27 T 28-03-2018 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 Pfam PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain 482 538 3.9E-8 T 28-03-2018 IPR005843 Alpha-D-phosphohexomutase, C-terminal GO:0016868|GO:0071704 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS07770 867b4225596f7a42622a073c532338eb 546 TIGRFAM TIGR01132 pgm: phosphoglucomutase, alpha-D-glucose phosphate-specific 1 544 0.0 T 28-03-2018 IPR005852 Phosphoglucomutase, alpha-D-glucose specific GO:0004614|GO:0005975 KEGG: 00010+5.4.2.2|KEGG: 00030+5.4.2.2|KEGG: 00052+5.4.2.2|KEGG: 00230+5.4.2.2|KEGG: 00500+5.4.2.2|KEGG: 00520+5.4.2.2|KEGG: 00521+5.4.2.2|MetaCyc: PWY-2723|MetaCyc: PWY-3801|MetaCyc: PWY-5384|MetaCyc: PWY-5661|MetaCyc: PWY-5940|MetaCyc: PWY-5941|MetaCyc: PWY-622|MetaCyc: PWY-6317|MetaCyc: PWY-6731|MetaCyc: PWY-6737|MetaCyc: PWY-7238|MetaCyc: PWY-7343 CI104_RS00135 814d0e786a2f14bd60803f1730773bbe 349 Gene3D G3DSA:3.20.20.80 36 301 8.9E-19 T 28-03-2018 CI104_RS00135 814d0e786a2f14bd60803f1730773bbe 349 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 55 275 3.1E-11 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CI104_RS00135 814d0e786a2f14bd60803f1730773bbe 349 SUPERFAMILY SSF51445 37 310 5.28E-29 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 Gene3D G3DSA:3.30.750.44 155 245 2.8E-21 T 28-03-2018 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 Pfam PF03572 Peptidase family S41 356 529 2.2E-52 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 Pfam PF11818 C-terminal domain of tail specific protease (DUF3340) 536 667 9.7E-39 T 28-03-2018 IPR020992 Tail specific protease, C-terminal CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 SMART SM00245 326 531 2.0E-79 T 28-03-2018 IPR005151 Tail specific protease GO:0006508|GO:0008236 Reactome: R-HSA-2187335|Reactome: R-HSA-2453902 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 SMART SM00228 246 323 4.3E-10 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 SUPERFAMILY SSF52096 194 264 2.49E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 SUPERFAMILY SSF52096 350 537 2.49E-68 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 Gene3D G3DSA:2.30.42.10 246 328 4.5E-16 T 28-03-2018 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 240 320 1.1E-14 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 TIGRFAM TIGR00225 prc: C-terminal processing peptidase 195 551 2.9E-128 T 28-03-2018 IPR004447 C-terminal-processing peptidase S41A GO:0006508|GO:0008236 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 Gene3D G3DSA:3.90.226.10 329 595 1.7E-58 T 28-03-2018 CI104_RS15210 4b2a2080de39f35a9c2efa09c0f0ed97 682 SUPERFAMILY SSF50156 219 345 1.5E-16 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 SMART SM00829 21 339 3.6E-4 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 Pfam PF00107 Zinc-binding dehydrogenase 161 298 5.7E-19 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 SUPERFAMILY SSF50129 7 146 4.49E-44 T 28-03-2018 IPR011032 GroES-like CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 Gene3D G3DSA:3.40.50.720 152 282 1.6E-28 T 28-03-2018 CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 SUPERFAMILY SSF50129 297 340 1.69E-5 T 28-03-2018 IPR011032 GroES-like CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 Gene3D G3DSA:3.90.180.10 2 151 4.1E-31 T 28-03-2018 CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 Pfam PF16884 N-terminal domain of oxidoreductase 9 115 1.8E-41 T 28-03-2018 CI104_RS13330 cd2514e9a38dee014c47bd27593050d4 345 SUPERFAMILY SSF51735 127 306 1.37E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS25765 fbc2feb8a18afb8f02f838dd392f8b23 113 Pfam PF16509 TrfB plasmid transcriptional repressor 7 93 1.4E-20 T 28-03-2018 IPR032428 TrfB transcriptional repressor protein CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 SUPERFAMILY SSF46785 2 109 5.99E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 Pfam PF03466 LysR substrate binding domain 86 288 1.0E-43 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 Gene3D G3DSA:3.40.190.10 88 173 2.2E-19 T 28-03-2018 CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 Gene3D G3DSA:1.10.10.10 1 87 1.4E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 2.7E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 SUPERFAMILY SSF53850 87 291 1.15E-41 T 28-03-2018 CI104_RS24730 b08cc8f7985d69ee065681d9ab5d8ab7 317 Gene3D G3DSA:3.40.190.10 174 263 5.0E-19 T 28-03-2018 CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 66 157 8.4E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 SUPERFAMILY SSF51604 145 397 7.34E-55 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 Gene3D G3DSA:3.30.390.10 1 159 1.3E-47 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 SUPERFAMILY SSF54826 41 158 4.46E-23 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 Gene3D G3DSA:3.20.20.120 160 390 3.6E-46 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 132 157 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 SMART SM00922 163 269 7.5E-8 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 Pfam PF13378 Enolase C-terminal domain-like 183 392 1.2E-36 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS17370 178d94549b06a9faeca987b00ea4ad88 401 Hamap MF_01288 L-rhamnonate dehydratase [rhmD]. 1 401 79.68 T 28-03-2018 IPR023444 L-rhamnonate dehydratase GO:0050032 KEGG: 00051+4.2.1.90|MetaCyc: PWY-6713|MetaCyc: PWY-6714 CI104_RS06010 6776b0fb0202a313cd49dc99d80a6158 207 Hamap MF_02072 Inhibitor of hydrogen peroxide resistance [iprA]. 1 207 44.774 T 28-03-2018 IPR034719 Inhibitor of hydrogen peroxide resistance CI104_RS06010 6776b0fb0202a313cd49dc99d80a6158 207 Gene3D G3DSA:1.10.10.10 134 199 1.5E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06010 6776b0fb0202a313cd49dc99d80a6158 207 Pfam PF15977 Winged helix-turn-helix DNA binding 138 205 3.6E-27 T 28-03-2018 CI104_RS06495 f6a0806df5a3e02dce440ed3454b3080 428 ProSitePatterns PS01219 Ammonium transporters signature. 182 207 - T 28-03-2018 IPR018047 Ammonium transporter, conserved site GO:0008519|GO:0016020|GO:0072488 CI104_RS06495 f6a0806df5a3e02dce440ed3454b3080 428 Gene3D G3DSA:1.10.3430.10 23 407 6.7E-133 T 28-03-2018 CI104_RS06495 f6a0806df5a3e02dce440ed3454b3080 428 TIGRFAM TIGR00836 amt: ammonium transporter 31 426 2.1E-138 T 28-03-2018 IPR001905 Ammonium transporter GO:0008519|GO:0016020|GO:0072488 CI104_RS06495 f6a0806df5a3e02dce440ed3454b3080 428 Pfam PF00909 Ammonium Transporter Family 33 426 7.8E-130 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CI104_RS06495 f6a0806df5a3e02dce440ed3454b3080 428 SUPERFAMILY SSF111352 27 407 3.27E-128 T 28-03-2018 IPR024041 Ammonium transporter AmtB-like domain GO:0008519|GO:0015696|GO:0016020 CI104_RS18590 b55c7d9ef4011545166c10c3995908cf 66 Pfam PF04384 Iron-sulphur cluster assembly 3 66 4.1E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CI104_RS18590 b55c7d9ef4011545166c10c3995908cf 66 Gene3D G3DSA:1.10.10.600 2 64 9.6E-34 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CI104_RS18590 b55c7d9ef4011545166c10c3995908cf 66 PIRSF PIRSF039003 3 66 5.5E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CI104_RS18590 b55c7d9ef4011545166c10c3995908cf 66 SUPERFAMILY SSF140319 3 64 7.19E-27 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CI104_RS18590 b55c7d9ef4011545166c10c3995908cf 66 TIGRFAM TIGR03412 iscX_yfhJ: FeS assembly protein IscX 4 66 6.5E-32 T 28-03-2018 IPR007479 ISC system FeS cluster assembly, IscX GO:0016226 CI104_RS07040 ca96bf69e912e745b8fee0f9938c1431 144 Gene3D G3DSA:3.10.180.10 4 139 2.9E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS07040 ca96bf69e912e745b8fee0f9938c1431 144 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 12 124 6.3E-15 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS07040 ca96bf69e912e745b8fee0f9938c1431 144 SUPERFAMILY SSF54593 12 130 1.09E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 Pfam PF00056 lactate/malate dehydrogenase, NAD binding domain 1 145 7.1E-46 T 28-03-2018 IPR001236 Lactate/malate dehydrogenase, N-terminal GO:0016491|GO:0055114 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 TIGRFAM TIGR01772 MDH_euk_gproteo: malate dehydrogenase, NAD-dependent 2 311 8.3E-140 T 28-03-2018 IPR010097 Malate dehydrogenase, type 1 GO:0006099|GO:0030060 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263|Reactome: R-HSA-71403 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 ProSitePatterns PS00068 Malate dehydrogenase active site signature. 146 158 - T 28-03-2018 IPR001252 Malate dehydrogenase, active site GO:0006108|GO:0016615|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|Reactome: R-HSA-70263 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 Hamap MF_01516 Malate dehydrogenase [mdh]. 1 311 60.51 T 28-03-2018 IPR023958 Malate dehydrogenase, type 1, bacterial GO:0006099|GO:0030060|GO:0055114 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 SUPERFAMILY SSF56327 146 311 2.62E-42 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 Gene3D G3DSA:3.90.110.10 148 312 1.5E-43 T 28-03-2018 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 Gene3D G3DSA:3.40.50.720 2 147 1.5E-39 T 28-03-2018 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 Pfam PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain 147 310 9.7E-52 T 28-03-2018 IPR022383 Lactate/malate dehydrogenase, C-terminal GO:0016616|GO:0055114 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 PIRSF PIRSF000102 1 311 3.8E-59 T 28-03-2018 IPR001557 L-lactate/malate dehydrogenase GO:0016616|GO:0019752|GO:0055114 CI104_RS02540 ebb2cb4d1e42f6a2fef5d01f4e8aaae8 312 SUPERFAMILY SSF51735 1 145 2.2E-38 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS05640 b6b80d08f53ef9f239b44c61aaf5526b 1293 Pfam PF14331 ImcF-related N-terminal domain 265 538 2.6E-82 T 28-03-2018 IPR025743 ImcF-related, N-terminal domain CI104_RS05640 b6b80d08f53ef9f239b44c61aaf5526b 1293 SUPERFAMILY SSF52540 187 359 4.02E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05640 b6b80d08f53ef9f239b44c61aaf5526b 1293 Pfam PF06761 Intracellular multiplication and human macrophage-killing 590 915 9.9E-76 T 28-03-2018 IPR009612 ImcF-related CI104_RS05640 b6b80d08f53ef9f239b44c61aaf5526b 1293 Gene3D G3DSA:3.40.50.300 191 571 1.7E-7 T 28-03-2018 CI104_RS05640 b6b80d08f53ef9f239b44c61aaf5526b 1293 TIGRFAM TIGR03348 VI_IcmF: type VI secretion protein IcmF 68 1290 0.0 T 28-03-2018 IPR017731 Type VI secretion system, IcmF CI104_RS05640 b6b80d08f53ef9f239b44c61aaf5526b 1293 Pfam PF06744 Type VI secretion protein IcmF C-terminal 1041 1240 3.2E-56 T 28-03-2018 IPR010623 Type VI secretion system IcmF, C-terminal CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 Pfam PF05697 Bacterial trigger factor protein (TF) 1 143 7.1E-41 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 Pfam PF05698 Bacterial trigger factor protein (TF) C-terminus 262 412 1.0E-40 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 TIGRFAM TIGR00115 tig: trigger factor 13 412 1.1E-142 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 Gene3D G3DSA:1.10.3120.10 211 389 1.6E-47 T 28-03-2018 IPR008880 Trigger factor, C-terminal GO:0006457|GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 SUPERFAMILY SSF54534 96 241 5.3E-37 T 28-03-2018 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 Hamap MF_00303 Trigger factor [tig]. 1 418 22.009 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 Gene3D G3DSA:3.30.70.1050 1 118 2.3E-34 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 PIRSF PIRSF003095 1 432 9.8E-131 T 28-03-2018 IPR005215 Trigger factor GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 SUPERFAMILY SSF102735 1 130 8.24E-39 T 28-03-2018 IPR008881 Trigger factor, ribosome-binding, bacterial GO:0006457|GO:0015031 CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 SUPERFAMILY SSF109998 248 429 1.22E-47 T 28-03-2018 IPR027304 Trigger factor/SurA domain CI104_RS06415 df0bd7ffe192b2e2931edcb1b349b36a 432 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 158 236 4.9E-14 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CI104_RS11315 0a1b10265b460949b2cdc1a247534a87 251 TIGRFAM TIGR01600 phage_tail_L: phage minor tail protein L 6 247 1.1E-62 T 28-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail CI104_RS11315 0a1b10265b460949b2cdc1a247534a87 251 Pfam PF05100 Phage minor tail protein L 24 248 2.3E-90 T 28-03-2018 IPR006487 Bacteriophage lambda, GpL, minor tail CI104_RS11990 9378c1f5c29ed2d2fabdc832d629b5f8 237 Gene3D G3DSA:3.20.20.450 7 225 6.2E-11 T 28-03-2018 IPR001633 EAL domain CI104_RS11990 9378c1f5c29ed2d2fabdc832d629b5f8 237 Pfam PF00563 EAL domain 12 222 4.3E-8 T 28-03-2018 IPR001633 EAL domain CI104_RS11990 9378c1f5c29ed2d2fabdc832d629b5f8 237 SUPERFAMILY SSF141868 12 228 1.27E-8 T 28-03-2018 IPR001633 EAL domain CI104_RS21940 92c33d4217fa1bdf3f8d53ae54c44c76 180 Gene3D G3DSA:3.40.50.300 4 175 5.8E-28 T 28-03-2018 CI104_RS21940 92c33d4217fa1bdf3f8d53ae54c44c76 180 Pfam PF01202 Shikimate kinase 12 165 8.1E-11 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS21940 92c33d4217fa1bdf3f8d53ae54c44c76 180 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 6 167 8.2E-71 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CI104_RS21940 92c33d4217fa1bdf3f8d53ae54c44c76 180 SUPERFAMILY SSF52540 3 165 2.52E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15940 5cfa04771cf9ca094d543fb8e446c50d 305 Pfam PF05661 Protein of unknown function (DUF808) 6 292 2.9E-114 T 28-03-2018 IPR008526 Inner membrane protein YedI CI104_RS15940 5cfa04771cf9ca094d543fb8e446c50d 305 PIRSF PIRSF016660 3 305 1.1E-125 T 28-03-2018 IPR008526 Inner membrane protein YedI CI104_RS22520 4cd2198a8e915e9d0f825f48f379c7c0 334 SUPERFAMILY SSF117892 196 233 1.28E-7 T 28-03-2018 IPR001107 Band 7 domain CI104_RS22520 4cd2198a8e915e9d0f825f48f379c7c0 334 TIGRFAM TIGR01932 hflC: HflC protein 1 327 1.5E-142 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CI104_RS22520 4cd2198a8e915e9d0f825f48f379c7c0 334 PIRSF PIRSF005651 1 334 2.7E-108 T 28-03-2018 IPR010200 HflC GO:0016021|GO:0052547 CI104_RS22520 4cd2198a8e915e9d0f825f48f379c7c0 334 SUPERFAMILY SSF117892 56 157 2.48E-16 T 28-03-2018 IPR001107 Band 7 domain CI104_RS22520 4cd2198a8e915e9d0f825f48f379c7c0 334 Pfam PF01145 SPFH domain / Band 7 family 22 243 3.6E-33 T 28-03-2018 IPR001107 Band 7 domain CI104_RS22520 4cd2198a8e915e9d0f825f48f379c7c0 334 SMART SM00244 18 227 7.1E-44 T 28-03-2018 IPR001107 Band 7 domain CI104_RS21230 5970049301a773f6bde22cd456321f63 137 PIRSF PIRSF029225 2 131 3.9E-45 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS21230 5970049301a773f6bde22cd456321f63 137 Gene3D G3DSA:3.40.50.10220 35 129 6.8E-32 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS21230 5970049301a773f6bde22cd456321f63 137 TIGRFAM TIGR00664 DNA_III_psi: DNA polymerase III, psi subunit 1 125 5.0E-54 T 28-03-2018 IPR018382 DNA polymerase III, psi subunit, subgroup GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS21230 5970049301a773f6bde22cd456321f63 137 ProDom PD032475 DNA POLYMERASE PSI SUBUNIT III TRANSFERASE NUCLEOTIDYLTRANSFERASE III 3D-STRUCTURE DNA-DIRECTED 34 125 8.0E-38 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS21230 5970049301a773f6bde22cd456321f63 137 Pfam PF03603 DNA polymerase III psi subunit 3 127 1.2E-42 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS21230 5970049301a773f6bde22cd456321f63 137 SUPERFAMILY SSF102220 27 135 3.27E-32 T 28-03-2018 IPR004615 DNA polymerase III, psi subunit GO:0003887|GO:0006260|GO:0008408 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS10600 b17cd363fd01592d53abef79319b3cb3 274 SUPERFAMILY SSF56112 13 259 1.43E-23 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS10600 b17cd363fd01592d53abef79319b3cb3 274 Hamap MF_01604 Thiamine kinase [thiK]. 3 270 37.631 T 28-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CI104_RS10600 b17cd363fd01592d53abef79319b3cb3 274 Pfam PF01636 Phosphotransferase enzyme family 30 224 7.1E-12 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CI104_RS10600 b17cd363fd01592d53abef79319b3cb3 274 TIGRFAM TIGR02721 ycfN_thiK: thiamine kinase 29 270 2.0E-90 T 28-03-2018 IPR014093 Thiamine kinase GO:0006772|GO:0016310|GO:0019165 KEGG: 00730+2.7.1.89|MetaCyc: PWY-6896 CI104_RS10600 b17cd363fd01592d53abef79319b3cb3 274 Gene3D G3DSA:1.10.510.10 130 226 2.3E-13 T 28-03-2018 CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 Pfam PF05175 Methyltransferase small domain 110 201 4.0E-6 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 Gene3D G3DSA:3.40.50.150 84 249 2.5E-19 T 28-03-2018 CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 169 175 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 SUPERFAMILY SSF53335 82 244 7.13E-24 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 104 118 3.6E-7 T 28-03-2018 CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 202 3.6E-7 T 28-03-2018 CI104_RS27080 50c476526858ee0bea6e85a91b4b9ab1 253 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 166 178 3.6E-7 T 28-03-2018 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 ProSitePatterns PS00819 Dps protein family signature 2. 77 91 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 Hamap MF_01441 DNA protection during starvation protein [dps]. 1 167 48.999 T 28-03-2018 IPR023067 DNA protection during starvation protein, gammaproteobacteria GO:0016722|GO:0055114 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 SUPERFAMILY SSF47240 10 167 3.69E-50 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 Gene3D G3DSA:1.20.1260.10 1 167 1.7E-40 T 28-03-2018 IPR012347 Ferritin-related CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 144 162 2.3E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 51 67 2.3E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 PRINTS PR01346 Helicobacter neutrophil-activating protein A family signature 75 91 2.3E-13 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 ProSitePatterns PS00818 Dps protein family signature 1. 51 67 - T 28-03-2018 IPR023188 DNA-binding protein Dps, conserved site GO:0016722|GO:0055114 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 Pfam PF00210 Ferritin-like domain 31 166 1.2E-21 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CI104_RS08465 b6930f30b3240b5cc036574d44caa088 167 PIRSF PIRSF005900 8 167 1.8E-43 T 28-03-2018 IPR002177 DNA-binding protein Dps GO:0006950|GO:0055114 CI104_RS07750 532f51a5342102723d1df5b059f047e1 176 Pfam PF00258 Flavodoxin 6 160 3.3E-34 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CI104_RS07750 532f51a5342102723d1df5b059f047e1 176 ProSitePatterns PS00201 Flavodoxin signature. 6 22 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CI104_RS07750 532f51a5342102723d1df5b059f047e1 176 PIRSF PIRSF038996 1 172 1.7E-70 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CI104_RS07750 532f51a5342102723d1df5b059f047e1 176 SUPERFAMILY SSF52218 5 170 1.65E-54 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS07750 532f51a5342102723d1df5b059f047e1 176 TIGRFAM TIGR01752 flav_long: flavodoxin 4 168 1.1E-77 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CI104_RS07750 532f51a5342102723d1df5b059f047e1 176 Gene3D G3DSA:3.40.50.360 4 170 9.1E-40 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 Gene3D G3DSA:1.10.10.10 8 96 3.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 Gene3D G3DSA:3.40.190.10 97 179 8.9E-9 T 28-03-2018 CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 Gene3D G3DSA:3.40.190.10 180 268 1.2E-26 T 28-03-2018 CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 SUPERFAMILY SSF53850 94 299 1.7E-39 T 28-03-2018 CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 67 5.4E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 SUPERFAMILY SSF46785 9 115 4.94E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03735 09cd8223eeb8a36c6e0de6d91ee65815 310 Pfam PF03466 LysR substrate binding domain 93 296 2.6E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 SUPERFAMILY SSF81923 18 130 1.43E-16 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 236 368 4.6E-10 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Pfam PF07724 AAA domain (Cdc48 subfamily) 608 775 6.2E-38 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 781 857 1.2E-10 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Gene3D G3DSA:1.10.8.60 781 879 1.6E-10 T 28-03-2018 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Gene3D G3DSA:1.10.1780.10 3 165 2.7E-14 T 28-03-2018 IPR004176 Clp, N-terminal GO:0019538 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 SMART SM01086 781 874 1.1E-8 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 720 734 3.1E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 613 631 3.1E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 658 676 3.1E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 687 705 3.1E-30 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Gene3D G3DSA:3.40.50.300 190 375 1.6E-21 T 28-03-2018 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 TIGRFAM TIGR03345 VI_ClpV1: type VI secretion ATPase, ClpV1 family 16 865 0.0 T 28-03-2018 IPR017729 Type VI secretion system, ATPase ClpV1 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 SUPERFAMILY SSF52540 193 521 1.03E-71 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Gene3D G3DSA:3.40.50.300 564 780 1.5E-32 T 28-03-2018 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 ProSitePatterns PS00870 Chaperonins clpA/B signature 1. 327 339 - T 28-03-2018 IPR018368 ClpA/B, conserved site 1 GO:0005524 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 Gene3D G3DSA:1.10.8.60 377 559 4.6E-37 T 28-03-2018 CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 SUPERFAMILY SSF52540 558 855 2.83E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 SMART SM00382 231 372 2.3E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05570 66ef5722209589ef875fa345175e54cb 884 SMART SM00382 609 764 2.9E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 Gene3D G3DSA:3.40.50.300 2 275 9.5E-77 T 28-03-2018 CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 SUPERFAMILY SSF54631 276 394 4.39E-12 T 28-03-2018 CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 Pfam PF00571 CBS domain 346 392 5.2E-5 T 28-03-2018 IPR000644 CBS domain CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 SMART SM00382 53 242 7.2E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 SUPERFAMILY SSF52540 43 270 3.78E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 Pfam PF00005 ABC transporter 45 192 1.1E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 TIGRFAM TIGR01186 proV: glycine betaine/L-proline transport ATP binding subunit 36 393 1.0E-189 T 28-03-2018 IPR005892 Glycine betaine transport ATP-binding subunit GO:0005524|GO:0016020|GO:0031460 CI104_RS19590 de01e2586765722e83d8877b4e006e2f 400 Gene3D G3DSA:3.10.580.10 276 396 3.0E-11 T 28-03-2018 CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 SMART SM00382 26 212 5.3E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 Pfam PF00005 ABC transporter 18 162 1.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 Gene3D G3DSA:3.10.580.10 257 314 1.0E-6 T 28-03-2018 CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 SUPERFAMILY SSF54631 246 311 5.76E-7 T 28-03-2018 CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 Gene3D G3DSA:3.40.50.300 1 256 2.0E-71 T 28-03-2018 CI104_RS16745 093a5defb9f31322996c9cb4f184d5e9 315 SUPERFAMILY SSF52540 1 239 6.01E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 Pfam PF10417 C-terminal domain of 1-Cys peroxiredoxin 156 181 1.8E-6 T 28-03-2018 IPR019479 Peroxiredoxin, C-terminal GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 Pfam PF00578 AhpC/TSA family 10 133 1.7E-32 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 SUPERFAMILY SSF52833 1 186 3.42E-53 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 PIRSF PIRSF000239 1 187 4.8E-50 T 28-03-2018 IPR024706 Peroxiredoxin, AhpC-type KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 TIGRFAM TIGR03137 AhpC: peroxiredoxin 1 187 1.2E-103 T 28-03-2018 IPR017559 Alkyl hydroperoxide reductase subunit C GO:0006979|GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 Gene3D G3DSA:3.30.1020.10 154 183 1.6E-9 T 28-03-2018 CI104_RS07380 24e5c3b94fec9cb633516907d20558bd 187 Gene3D G3DSA:3.40.30.10 5 153 8.8E-32 T 28-03-2018 CI104_RS01660 61e70af69c86ab5c1808480d2569e895 695 Gene3D G3DSA:3.20.20.80 139 687 1.5E-155 T 28-03-2018 CI104_RS01660 61e70af69c86ab5c1808480d2569e895 695 Pfam PF02446 4-alpha-glucanotransferase 149 665 2.3E-130 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CI104_RS01660 61e70af69c86ab5c1808480d2569e895 695 TIGRFAM TIGR00217 malQ: 4-alpha-glucanotransferase 101 686 1.3E-282 T 28-03-2018 IPR003385 Glycoside hydrolase, family 77 GO:0004134|GO:0005975 KEGG: 00500+2.4.1.25|MetaCyc: PWY-5941|MetaCyc: PWY-6724|MetaCyc: PWY-6737|MetaCyc: PWY-7238 CI104_RS01660 61e70af69c86ab5c1808480d2569e895 695 SUPERFAMILY SSF51445 609 683 4.13E-146 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS01660 61e70af69c86ab5c1808480d2569e895 695 SUPERFAMILY SSF51445 143 571 4.13E-146 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS22425 78865c3244993fff51ecd036064e0988 131 SUPERFAMILY SSF54995 1 103 4.58E-37 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22425 78865c3244993fff51ecd036064e0988 131 TIGRFAM TIGR00166 S6: ribosomal protein bS6 1 94 3.1E-38 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22425 78865c3244993fff51ecd036064e0988 131 Hamap MF_00360 30S ribosomal protein S6 [rpsF]. 1 94 21.693 T 28-03-2018 IPR020814 Ribosomal protein S6, plastid/chloroplast GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS22425 78865c3244993fff51ecd036064e0988 131 ProSitePatterns PS01048 Ribosomal protein S6 signature. 43 52 - T 28-03-2018 IPR020815 Ribosomal protein S6, conserved site GO:0003735|GO:0005840|GO:0006412|GO:0019843 CI104_RS22425 78865c3244993fff51ecd036064e0988 131 Pfam PF01250 Ribosomal protein S6 3 91 2.7E-27 T 28-03-2018 IPR000529 Ribosomal protein S6 GO:0003735|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22425 78865c3244993fff51ecd036064e0988 131 Gene3D G3DSA:3.30.70.60 1 100 2.6E-30 T 28-03-2018 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CI104_RS17280 20b247614f7f313b13112a313266f831 338 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 122 2.2E-30 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS17280 20b247614f7f313b13112a313266f831 338 SUPERFAMILY SSF51735 3 147 3.06E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS17280 20b247614f7f313b13112a313266f831 338 SUPERFAMILY SSF55347 156 260 8.94E-11 T 28-03-2018 CI104_RS17280 20b247614f7f313b13112a313266f831 338 Gene3D G3DSA:3.30.360.10 130 338 5.1E-20 T 28-03-2018 CI104_RS17280 20b247614f7f313b13112a313266f831 338 Gene3D G3DSA:3.40.50.720 1 129 1.5E-34 T 28-03-2018 CI104_RS27095 83638286037c3a19df808605024d7a7c 806 Gene3D G3DSA:2.60.40.1310 554 655 5.6E-4 T 28-03-2018 CI104_RS27095 83638286037c3a19df808605024d7a7c 806 Gene3D G3DSA:2.60.40.1310 664 797 0.22 T 28-03-2018 CI104_RS27095 83638286037c3a19df808605024d7a7c 806 Pfam PF13750 Bacterial Ig-like domain (group 3) 549 705 4.9E-63 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS27095 83638286037c3a19df808605024d7a7c 806 Pfam PF12245 Bacterial Ig-like domain (group 3) 222 258 5.0E-10 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SUPERFAMILY SSF52540 368 415 1.28E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SUPERFAMILY SSF52540 5 228 1.28E-82 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Pfam PF02810 SEC-C motif 881 899 1.1E-10 T 28-03-2018 IPR004027 SEC-C motif CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Gene3D G3DSA:1.10.3060.10 635 732 5.6E-29 T 28-03-2018 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Gene3D G3DSA:3.40.50.300 303 416 4.3E-8 T 28-03-2018 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Gene3D G3DSA:3.40.50.300 9 267 4.3E-56 T 28-03-2018 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Pfam PF07516 SecA Wing and Scaffold domain 617 830 3.6E-69 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SMART SM00957 6 402 0.0 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SUPERFAMILY SSF52540 416 618 1.98E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SUPERFAMILY SSF81767 227 368 6.54E-44 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 ProSitePatterns PS01312 SecA family signature. 500 515 - T 28-03-2018 IPR020937 SecA conserved site GO:0006605|GO:0006886|GO:0016020 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Pfam PF01043 SecA preprotein cross-linking domain 232 358 2.8E-39 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 TIGRFAM TIGR00963 secA: preprotein translocase, SecA subunit 28 817 0.0 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SMART SM00958 228 358 1.3E-82 T 28-03-2018 IPR011130 SecA preprotein, cross-linking domain GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SUPERFAMILY SSF81886 620 840 7.98E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 SUPERFAMILY SSF81886 877 889 7.98E-86 T 28-03-2018 IPR011116 SecA Wing/Scaffold GO:0016020|GO:0017038 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Hamap MF_01382 Protein translocase subunit SecA [secA]. 5 832 19.887 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Gene3D G3DSA:3.10.450.50 733 901 1.9E-56 T 28-03-2018 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 170 190 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 117 127 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 376 393 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 63 87 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 101 115 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 413 426 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 PRINTS PR00906 SecA protein signature 339 361 5.2E-74 T 28-03-2018 IPR000185 Protein translocase subunit SecA GO:0005524|GO:0006605|GO:0006886 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Gene3D G3DSA:3.40.50.300 417 634 7.1E-54 T 28-03-2018 CI104_RS04940 99e1b31ae8a00ba282f8655004f9249c 901 Pfam PF07517 SecA DEAD-like domain 7 402 2.7E-131 T 28-03-2018 IPR011115 SecA DEAD-like, N-terminal GO:0005524|GO:0016020|GO:0017038 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 Gene3D G3DSA:3.20.20.80 134 572 5.4E-107 T 28-03-2018 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 SMART SM00642 130 558 1.2E-7 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 Gene3D G3DSA:2.60.40.1180 573 657 3.9E-7 T 28-03-2018 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 Pfam PF00128 Alpha amylase, catalytic domain 185 269 1.8E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 Hamap MF_01248 Glycogen debranching enzyme [glgX]. 1 657 71.881 T 28-03-2018 IPR022844 Glycogen debranching enzyme, bacterial GO:0004553|GO:0005977 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 SUPERFAMILY SSF81296 7 144 2.8E-43 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 Gene3D G3DSA:2.60.40.10 1 133 7.5E-42 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 SUPERFAMILY SSF51445 130 463 5.28E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 SUPERFAMILY SSF51445 492 564 5.28E-126 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 Pfam PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 12 97 8.4E-19 T 28-03-2018 IPR004193 Glycoside hydrolase, family 13, N-terminal GO:0004553|GO:0005975 Reactome: R-HSA-3322077 CI104_RS01550 994bd5c9e633473306536453d8b1d9cb 657 TIGRFAM TIGR02100 glgX_debranch: glycogen debranching enzyme GlgX 7 628 2.5E-265 T 28-03-2018 IPR011837 Glycogen debranching enzyme, GlgX type GO:0004133|GO:0004553|GO:0005980 CI104_RS27995 ebcb6f6ea6ec6d46cb8d2130691897a6 127 SUPERFAMILY SSF46689 8 58 3.76E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27995 ebcb6f6ea6ec6d46cb8d2130691897a6 127 Pfam PF01527 Transposase 9 61 1.4E-13 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CI104_RS27995 ebcb6f6ea6ec6d46cb8d2130691897a6 127 Gene3D G3DSA:1.10.10.10 3 68 3.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 SUPERFAMILY SSF51735 4 249 2.51E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 8.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 74 85 8.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 8.4E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 248 3.3E-51 T 28-03-2018 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 Gene3D G3DSA:3.40.50.720 46 251 1.5E-56 T 28-03-2018 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 Gene3D G3DSA:3.40.50.720 1 45 8.9E-8 T 28-03-2018 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 9 180 0.0052 T 28-03-2018 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 97 117 7.0E-66 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 15 32 7.0E-66 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 201 220 7.0E-66 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 227 246 7.0E-66 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 162 185 7.0E-66 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 PRINTS PR01397 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase signature 77 94 7.0E-66 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS07345 ba38993d124cc5de2179479b2d8748c8 251 TIGRFAM TIGR04316 dhbA_paeA: 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase 11 250 6.9E-106 T 28-03-2018 IPR003560 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase GO:0008667|GO:0019290|GO:0055114 MetaCyc: PWY-5901 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 Hamap MF_00484 Glycogen synthase [glgA]. 1 476 46.829 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 TIGRFAM TIGR02095 glgA: glycogen/starch synthase, ADP-glucose type 1 475 2.8E-175 T 28-03-2018 IPR011835 Bacterial/plant glycogen synthase GO:0004373 KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 Gene3D G3DSA:3.40.50.2000 262 472 1.3E-31 T 28-03-2018 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 Pfam PF08323 Starch synthase catalytic domain 2 233 1.8E-71 T 28-03-2018 IPR013534 Starch synthase, catalytic domain KEGG: 00500+2.4.1.21|MetaCyc: PWY-622 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 Gene3D G3DSA:3.40.50.2000 14 261 8.7E-12 T 28-03-2018 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 Pfam PF00534 Glycosyl transferases group 1 287 438 5.6E-13 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS01560 a7f503c836dfcd372681ba0e8f4f0e1a 477 SUPERFAMILY SSF53756 5 476 4.54E-116 T 28-03-2018 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Pfam PF02568 Thiamine biosynthesis protein (ThiI) 175 369 1.0E-80 T 28-03-2018 IPR020536 Thil, AANH domain GO:0004810 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 TIGRFAM TIGR00342 TIGR00342: tRNA sulfurtransferase ThiI 4 377 3.8E-145 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 SUPERFAMILY SSF52821 403 481 5.08E-9 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 SUPERFAMILY SSF52402 174 372 9.48E-42 T 28-03-2018 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 SMART SM00981 75 165 7.0E-27 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Gene3D G3DSA:3.40.50.620 175 400 1.7E-27 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 TIGRFAM TIGR04271 ThiI_C_thiazole: thiazole biosynthesis domain 383 482 7.6E-41 T 28-03-2018 IPR026340 Thiazole biosynthesis domain GO:0052837 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Gene3D G3DSA:3.30.2300.10 84 162 3.1E-22 T 28-03-2018 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 SUPERFAMILY SSF143437 1 173 2.79E-51 T 28-03-2018 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Hamap MF_00021 tRNA sulfurtransferase [thiI]. 1 482 233.132 T 28-03-2018 IPR003720 tRNA sulfurtransferase ThiI GO:0005737|GO:0016783|GO:0034227 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Gene3D G3DSA:3.40.250.10 405 481 1.4E-9 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Pfam PF02926 THUMP domain 28 161 1.3E-29 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CI104_RS06315 edfc4262712658b9da501dc6516d88c9 482 Gene3D G3DSA:3.30.70.1510 2 82 1.1E-21 T 28-03-2018 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Gene3D G3DSA:3.30.450.20 41 173 1.7E-22 T 28-03-2018 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 SMART SM00387 428 541 2.7E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 SUPERFAMILY SSF55890 332 376 3.92E-8 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Pfam PF17203 Single cache domain 3 60 173 3.7E-20 T 28-03-2018 IPR033463 Single cache domain 3 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 4.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 525 538 4.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 501 519 4.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 PRINTS PR00344 Bacterial sensor protein C-terminal signature 487 497 4.5E-8 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Gene3D G3DSA:3.30.450.20 212 335 4.6E-9 T 28-03-2018 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Gene3D G3DSA:1.10.287.130 336 382 6.0E-14 T 28-03-2018 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 SMART SM00091 222 292 8.9E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 SUPERFAMILY SSF55785 223 284 9.07E-9 T 28-03-2018 IPR000014 PAS domain CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 SUPERFAMILY SSF103190 48 178 3.65E-31 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Pfam PF00989 PAS fold 225 284 7.0E-6 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Gene3D G3DSA:3.30.565.10 383 549 2.1E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 429 539 1.1E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 SUPERFAMILY SSF55874 410 541 7.33E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS07455 d947a7498c990ebfff8573d95b7ca721 553 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 330 374 4.2E-8 T 28-03-2018 CI104_RS07530 847a4a10badb93287446e60c702857db 633 SUPERFAMILY SSF56601 254 611 2.47E-91 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS07530 847a4a10badb93287446e60c702857db 633 Gene3D G3DSA:3.40.710.10 250 618 5.1E-81 T 28-03-2018 CI104_RS07530 847a4a10badb93287446e60c702857db 633 TIGRFAM TIGR03423 pbp2_mrdA: penicillin-binding protein 2 19 612 3.7E-237 T 28-03-2018 IPR017790 Penicillin-binding protein 2 GO:0008658|GO:0016020 CI104_RS07530 847a4a10badb93287446e60c702857db 633 Pfam PF03717 Penicillin-binding Protein dimerisation domain 64 239 5.2E-45 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CI104_RS07530 847a4a10badb93287446e60c702857db 633 SUPERFAMILY SSF56519 56 253 2.09E-53 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CI104_RS07530 847a4a10badb93287446e60c702857db 633 Gene3D G3DSA:3.90.1310.10 33 249 7.7E-54 T 28-03-2018 CI104_RS07530 847a4a10badb93287446e60c702857db 633 Pfam PF00905 Penicillin binding protein transpeptidase domain 272 609 2.1E-89 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS15745 d19abac75d9417fb3cfe6c900f525fbd 182 Hamap MF_01437 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [pgsA]. 1 182 34.522 T 28-03-2018 IPR023762 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase, bacterial GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CI104_RS15745 d19abac75d9417fb3cfe6c900f525fbd 182 TIGRFAM TIGR00560 pgsA: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 3 180 4.4E-64 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CI104_RS15745 d19abac75d9417fb3cfe6c900f525fbd 182 PIRSF PIRSF000847 1 177 2.6E-43 T 28-03-2018 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase GO:0008444|GO:0008654|GO:0016021 KEGG: 00564+2.7.8.5|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CI104_RS15745 d19abac75d9417fb3cfe6c900f525fbd 182 Pfam PF01066 CDP-alcohol phosphatidyltransferase 4 71 1.8E-17 T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CI104_RS15745 d19abac75d9417fb3cfe6c900f525fbd 182 ProSitePatterns PS00379 CDP-alcohol phosphatidyltransferases signature. 49 71 - T 28-03-2018 IPR000462 CDP-alcohol phosphatidyltransferase GO:0008654|GO:0016020|GO:0016780 CI104_RS18360 7412f4eef7f6372feb4e5f33abb80ca2 118 SUPERFAMILY SSF52833 1 115 2.24E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS18360 7412f4eef7f6372feb4e5f33abb80ca2 118 Gene3D G3DSA:3.40.30.10 1 116 1.1E-35 T 28-03-2018 CI104_RS18360 7412f4eef7f6372feb4e5f33abb80ca2 118 TIGRFAM TIGR01617 arsC_related: transcriptional regulator, Spx/MgsR family 3 114 4.2E-32 T 28-03-2018 IPR006504 Transcriptional regulator Spx/MgsR CI104_RS18360 7412f4eef7f6372feb4e5f33abb80ca2 118 Pfam PF03960 ArsC family 6 114 1.2E-16 T 28-03-2018 IPR006660 Arsenate reductase-like CI104_RS07430 d665c86354acbf397ede455dfb1e2d3b 183 Pfam PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase 13 175 5.2E-52 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CI104_RS07430 d665c86354acbf397ede455dfb1e2d3b 183 TIGRFAM TIGR03124 citrate_citX: holo-ACP synthase CitX 13 175 3.6E-57 T 28-03-2018 IPR005551 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase GO:0051191 CI104_RS12795 3854f23bb29a036d8168994b736fb11b 681 Gene3D G3DSA:1.10.1370.10 457 681 5.6E-53 T 28-03-2018 CI104_RS12795 3854f23bb29a036d8168994b736fb11b 681 Gene3D G3DSA:1.10.1370.10 146 372 3.6E-40 T 28-03-2018 CI104_RS12795 3854f23bb29a036d8168994b736fb11b 681 SUPERFAMILY SSF55486 5 679 5.24E-172 T 28-03-2018 CI104_RS12795 3854f23bb29a036d8168994b736fb11b 681 Pfam PF01432 Peptidase family M3 233 678 1.3E-138 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CI104_RS12795 3854f23bb29a036d8168994b736fb11b 681 Gene3D G3DSA:1.20.1050.40 10 144 2.2E-35 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CI104_RS17325 00e44f2a8f967cbfdc73f8e179190eca 212 Pfam PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family 7 209 4.2E-67 T 28-03-2018 IPR010440 Lipopolysaccharide kinase GO:0005524|GO:0016020|GO:0016773 Reactome: R-HSA-6782315|Reactome: R-HSA-6804756 CI104_RS17325 00e44f2a8f967cbfdc73f8e179190eca 212 PIRSF PIRSF026326 1 212 1.7E-62 T 28-03-2018 IPR027023 Putative lipopolysaccharide kinase InaA CI104_RS17325 00e44f2a8f967cbfdc73f8e179190eca 212 SUPERFAMILY SSF56112 25 212 2.04E-12 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS19900 cd369844c376b8a5005aa8eb8e3557cb 78 Gene3D G3DSA:2.20.25.10 2 41 5.7E-4 T 28-03-2018 CI104_RS17800 2af4ea97eaad30bbde07c3256b41b813 269 Pfam PF01925 Sulfite exporter TauE/SafE 18 253 1.2E-43 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 PIRSF PIRSF039144 1 112 9.8E-53 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 SUPERFAMILY SSF54913 1 112 4.13E-42 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 SMART SM00938 4 105 5.0E-61 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 83 103 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 2 17 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 52 75 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 PRINTS PR00340 P-II protein signature 23 41 4.1E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.9E-41 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS06490 cf694437af3ddb7049c669fc92e59b16 112 Gene3D G3DSA:3.30.70.120 1 108 1.1E-45 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CI104_RS19825 0d89c8f5c65f60710b6534d7101c75c1 608 Pfam PF00361 Proton-conducting membrane transporter 124 401 2.6E-37 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 Pfam PF13377 Periplasmic binding protein-like domain 169 329 9.0E-34 T 28-03-2018 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 7.8E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 SUPERFAMILY SSF47413 1 58 1.89E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 5.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 5.4E-7 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 SUPERFAMILY SSF53822 60 330 1.0E-77 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 SMART SM00354 1 71 1.2E-33 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 Gene3D G3DSA:3.40.50.2300 58 167 3.8E-22 T 28-03-2018 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 Gene3D G3DSA:1.10.260.40 2 57 1.9E-24 T 28-03-2018 CI104_RS16875 857dcbc9d2fdc15e4c00dfab67c81579 340 Gene3D G3DSA:3.40.50.2300 168 332 1.8E-45 T 28-03-2018 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 Pfam PF00920 Dehydratase family 34 607 1.3E-218 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 SUPERFAMILY SSF52016 421 610 8.63E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 509 520 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 Gene3D G3DSA:3.40.50.2300 54 173 0.0064 T 28-03-2018 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 Hamap MF_00012 Dihydroxy-acid dehydratase [ilvD]. 4 610 45.191 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 122 132 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 SUPERFAMILY SSF143975 3 420 2.48E-134 T 28-03-2018 CI104_RS25000 23f5e17abba18d9fe99d65059860c70c 616 TIGRFAM TIGR00110 ilvD: dihydroxy-acid dehydratase 18 610 2.0E-271 T 28-03-2018 IPR004404 Dihydroxy-acid dehydratase GO:0004160|GO:0009082 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS17535 7aee74dd56df658ddde30445bbc61a70 166 Gene3D G3DSA:3.40.30.10 84 166 2.7E-14 T 28-03-2018 CI104_RS17535 7aee74dd56df658ddde30445bbc61a70 166 ProSitePatterns PS01099 Respiratory-chain NADH dehydrogenase 24 Kd subunit signature. 123 141 - T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17535 7aee74dd56df658ddde30445bbc61a70 166 SUPERFAMILY SSF52833 16 165 9.28E-51 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS17535 7aee74dd56df658ddde30445bbc61a70 166 PIRSF PIRSF000216 1 166 9.7E-54 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17535 7aee74dd56df658ddde30445bbc61a70 166 Pfam PF01257 Thioredoxin-like [2Fe-2S] ferredoxin 24 166 1.4E-50 T 28-03-2018 CI104_RS17535 7aee74dd56df658ddde30445bbc61a70 166 TIGRFAM TIGR01958 nuoE_fam: NADH-quinone oxidoreductase, E subunit 22 166 2.9E-52 T 28-03-2018 IPR002023 NADH-quinone oxidoreductase subunit E-like GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS14615 f84cc43a28433745b3659945c0315505 304 SUPERFAMILY SSF52317 4 160 4.53E-32 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS14615 f84cc43a28433745b3659945c0315505 304 Gene3D G3DSA:3.50.30.60 144 299 7.0E-39 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CI104_RS14615 f84cc43a28433745b3659945c0315505 304 SUPERFAMILY SSF141986 139 288 4.97E-39 T 28-03-2018 IPR027461 LD-carboxypeptidase A, C-terminal domain CI104_RS14615 f84cc43a28433745b3659945c0315505 304 Pfam PF02016 LD-carboxypeptidase 6 284 7.2E-65 T 28-03-2018 IPR003507 Peptidase family S66 CI104_RS14615 f84cc43a28433745b3659945c0315505 304 Gene3D G3DSA:3.40.50.10740 1 143 1.9E-40 T 28-03-2018 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CI104_RS14615 f84cc43a28433745b3659945c0315505 304 PIRSF PIRSF028757 1 300 5.1E-81 T 28-03-2018 IPR003507 Peptidase family S66 CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 TIGRFAM TIGR01187 potA: polyamine ABC transporter, ATP-binding protein 48 372 1.9E-167 T 28-03-2018 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit GO:0015417|GO:0015846|GO:0043190 CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 SUPERFAMILY SSF50331 250 364 1.53E-7 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 Pfam PF00005 ABC transporter 35 174 1.7E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 SUPERFAMILY SSF52540 18 258 3.5E-88 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 Gene3D G3DSA:3.40.50.300 14 272 3.9E-74 T 28-03-2018 CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 Pfam PF08402 TOBE domain 292 372 1.2E-7 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 SMART SM00382 42 225 1.9E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS10955 3589bbce04394937bd452bc86f1caee1 378 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS19620 8325f34796917b27492543f57c87e698 176 SUPERFAMILY SSF46785 21 166 3.18E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19620 8325f34796917b27492543f57c87e698 176 SMART SM00347 46 148 1.9E-31 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19620 8325f34796917b27492543f57c87e698 176 ProSitePatterns PS01117 MarR-type HTH domain signature. 87 121 - T 28-03-2018 IPR023187 Transcriptional regulator MarR-type, conserved site CI104_RS19620 8325f34796917b27492543f57c87e698 176 Gene3D G3DSA:1.10.10.10 24 169 4.1E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19620 8325f34796917b27492543f57c87e698 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 72 88 1.3E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19620 8325f34796917b27492543f57c87e698 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 138 158 1.3E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19620 8325f34796917b27492543f57c87e698 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 89 104 1.3E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19620 8325f34796917b27492543f57c87e698 176 PRINTS PR00598 Bacterial regulatory protein MarR family signature 108 124 1.3E-24 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19620 8325f34796917b27492543f57c87e698 176 Pfam PF01047 MarR family 53 112 1.4E-16 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 Gene3D G3DSA:3.30.70.20 82 178 2.1E-4 T 28-03-2018 CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 Gene3D G3DSA:3.30.70.20 10 45 6.3E-8 T 28-03-2018 CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 40 51 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 SUPERFAMILY SSF54862 18 115 1.76E-22 T 28-03-2018 CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 Pfam PF12838 4Fe-4S dicluster domain 39 89 2.1E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 75 86 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS19810 6a79b322a2a2735c99fb05b451412319 180 Gene3D G3DSA:3.30.70.20 46 81 3.3E-16 T 28-03-2018 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 Hamap MF_02063 Proton/glutamate-aspartate symporter [gltP]. 1 428 48.179 T 28-03-2018 IPR034703 Proton/glutamate-aspartate symporter GltP GO:0006835|GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 306 329 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 43 58 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 SUPERFAMILY SSF118215 8 412 8.63E-122 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 Gene3D G3DSA:1.10.3860.10 2 418 1.3E-124 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 Pfam PF00375 Sodium:dicarboxylate symporter family 8 411 8.6E-116 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 203 222 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 365 385 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 338 357 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 81 106 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 303 329 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 6 26 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 51 71 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS23150 3e8b2a32a62b13a45a55d550d9e74281 436 PRINTS PR00173 Glutamate-aspartate symporter signature 155 177 1.6E-52 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS14750 bb0261e9f1df766b66ca7ce5897b0da0 272 Gene3D G3DSA:4.10.1070.10 167 264 7.1E-20 T 28-03-2018 CI104_RS14750 bb0261e9f1df766b66ca7ce5897b0da0 272 Gene3D G3DSA:3.90.1340.10 102 166 2.0E-6 T 28-03-2018 IPR011083 Phage tail collar domain CI104_RS14750 bb0261e9f1df766b66ca7ce5897b0da0 272 SUPERFAMILY SSF88874 109 271 1.27E-26 T 28-03-2018 CI104_RS04045 7d18fbb9f00d88f6153ffa18062d0f56 163 TIGRFAM TIGR03993 hydrog_HybE: [NiFe] hydrogenase assembly chaperone, HybE family 16 154 7.7E-50 T 28-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CI104_RS04045 7d18fbb9f00d88f6153ffa18062d0f56 163 Pfam PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE 12 156 1.9E-44 T 28-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CI104_RS04045 7d18fbb9f00d88f6153ffa18062d0f56 163 ProDom PD008308 HUPJ HYDROGENASE EXPRESSION/FORMATION HYDROGENASE-2 HYBE COMPONENT OPERON ELECTRON METAL-BINDING IRON 16 146 4.0E-63 T 28-03-2018 IPR023994 [NiFe]-hydrogenase assembly, chaperone, HybE CI104_RS20540 2ad2c21867720bc7f472fb5f2426652f 472 Pfam PF06545 Protein of unknown function (DUF1116) 143 357 8.3E-88 T 28-03-2018 IPR009499 Protein of unknown function DUF1116 CI104_RS20540 2ad2c21867720bc7f472fb5f2426652f 472 Gene3D G3DSA:3.90.1710.10 161 302 2.3E-58 T 28-03-2018 CI104_RS20540 2ad2c21867720bc7f472fb5f2426652f 472 Gene3D G3DSA:1.10.10.660 96 160 2.0E-32 T 28-03-2018 IPR024033 Uncharacterised domain, YlbE CI104_RS20540 2ad2c21867720bc7f472fb5f2426652f 472 Gene3D G3DSA:3.90.1700.10 305 466 4.2E-71 T 28-03-2018 CI104_RS18430 c74f7a9bf19d97f9eca596532b8a4906 281 Gene3D G3DSA:1.10.10.60 8 36 1.1E-6 T 28-03-2018 CI104_RS18430 c74f7a9bf19d97f9eca596532b8a4906 281 SUPERFAMILY SSF46689 22 107 1.52E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS18430 c74f7a9bf19d97f9eca596532b8a4906 281 Pfam PF13384 Homeodomain-like domain 19 46 1.1E-5 T 28-03-2018 CI104_RS18430 c74f7a9bf19d97f9eca596532b8a4906 281 Gene3D G3DSA:1.10.10.10 37 67 6.0E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18430 c74f7a9bf19d97f9eca596532b8a4906 281 Gene3D G3DSA:3.30.420.10 126 280 0.043 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 ProSitePatterns PS00978 FAD-dependent glycerol-3-phosphate dehydrogenase signature 2. 352 362 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 SUPERFAMILY SSF51905 312 375 7.48E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 SUPERFAMILY SSF51905 1 260 7.48E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 Pfam PF01266 FAD dependent oxidoreductase 5 323 6.3E-49 T 28-03-2018 IPR006076 FAD dependent oxidoreductase GO:0016491|GO:0055114 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 4 16 4.7E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 33 45 4.7E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 17 27 4.7E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 347 359 4.7E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 78 90 4.7E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 PRINTS PR01001 FAD-dependent glycerol-3-phosphate dehydrogenase family signature 313 319 4.7E-28 T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 ProSitePatterns PS00977 FAD-dependent glycerol-3-phosphate dehydrogenase signature 1. 9 26 - T 28-03-2018 IPR000447 FAD-dependent glycerol-3-phosphate dehydrogenase GO:0004368|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 Gene3D G3DSA:3.30.9.10 183 320 1.5E-38 T 28-03-2018 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 Gene3D G3DSA:3.30.9.10 87 182 3.7E-16 T 28-03-2018 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 SUPERFAMILY SSF54373 226 319 6.87E-7 T 28-03-2018 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 Gene3D G3DSA:3.40.50.720 3 86 0.0017 T 28-03-2018 CI104_RS01595 e17f2e3dfe279425c7dfef4558251655 502 Pfam PF16901 C-terminal domain of alpha-glycerophosphate oxidase 381 491 6.2E-13 T 28-03-2018 IPR031656 Alpha-glycerophosphate oxidase, C-terminal KEGG: 00564+1.1.5.3|MetaCyc: PWY-4261|MetaCyc: PWY-6118|MetaCyc: PWY-6952|Reactome: R-HSA-163560 CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 Pfam PF06725 3D domain 277 354 1.1E-24 T 28-03-2018 IPR010611 3D domain GO:0004553|GO:0009254|GO:0019867 CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 Gene3D G3DSA:2.40.240.50 58 259 1.9E-62 T 28-03-2018 CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 SMART SM00925 125 257 4.2E-69 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 Pfam PF03562 MltA specific insert domain 95 257 2.6E-40 T 28-03-2018 IPR005300 Lytic transglycosylase MltA, domain B GO:0004553 CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 SUPERFAMILY SSF50685 25 353 1.43E-114 T 28-03-2018 IPR009009 RlpA-like protein, double-psi beta-barrel domain CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 PIRSF PIRSF019422 145 365 2.1E-73 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CI104_RS20275 46a019ed561a3f9ff4df082213ea9c07 365 PIRSF PIRSF019422 1 147 1.2E-20 T 28-03-2018 IPR026044 Membrane-bound lytic murein transglycosylase A CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 ProSitePatterns PS01244 Aconitase family signature 2. 399 412 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 Gene3D G3DSA:3.30.499.10 303 466 1.1E-52 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 TIGRFAM TIGR00170 leuC: 3-isopropylmalate dehydratase, large subunit 1 465 8.4E-279 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 Hamap MF_01026 3-isopropylmalate dehydratase large subunit [leuC]. 1 466 62.639 T 28-03-2018 IPR004430 3-isopropylmalate dehydratase, large subunit GO:0003861|GO:0009098|GO:0051539 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 ProSitePatterns PS00450 Aconitase family signature 1. 339 355 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 Gene3D G3DSA:3.30.499.10 1 152 7.9E-40 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 Gene3D G3DSA:3.40.1060.10 153 288 2.9E-43 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 286 300 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 209 222 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 82 95 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 119 132 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 343 354 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 399 412 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 133 148 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 108 116 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 PRINTS PR00415 Aconitase family signature 195 208 1.3E-50 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 Pfam PF00330 Aconitase family (aconitate hydratase) 7 457 2.0E-160 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04820 a28da331f2c4427ee4fc2d615f063276 466 SUPERFAMILY SSF53732 2 464 1.57E-166 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 SUPERFAMILY SSF53901 3 269 1.17E-83 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 Pfam PF02803 Thiolase, C-terminal domain 270 391 3.4E-52 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 ProSitePatterns PS00099 Thiolases active site. 373 386 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 PIRSF PIRSF000429 1 392 4.7E-130 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 Gene3D G3DSA:3.40.47.10 1 183 9.7E-38 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 Gene3D G3DSA:3.40.47.10 184 264 1.5E-21 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 390 1.5E-142 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 Gene3D G3DSA:3.40.47.10 265 389 9.7E-34 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 ProSitePatterns PS00737 Thiolases signature 2. 338 354 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 SUPERFAMILY SSF53901 271 391 9.91E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS20455 e60996ed7516102e15412a03ac333989 392 Pfam PF00108 Thiolase, N-terminal domain 4 261 3.7E-101 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CI104_RS12475 60f9e3d5fb3afbef127f56c6d6ce9bbc 286 SUPERFAMILY SSF53613 1 280 1.87E-74 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS12475 60f9e3d5fb3afbef127f56c6d6ce9bbc 286 Hamap MF_01639 Pyridoxal kinase PdxY [pdxY]. 1 286 53.602 T 28-03-2018 IPR023685 Pyridoxal kinase PdxY GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282 CI104_RS12475 60f9e3d5fb3afbef127f56c6d6ce9bbc 286 TIGRFAM TIGR00687 pyridox_kin: pyridoxal kinase 1 285 8.8E-140 T 28-03-2018 IPR004625 Pyridoxine kinase GO:0008478|GO:0009443 KEGG: 00750+2.7.1.35|MetaCyc: PWY-7204|MetaCyc: PWY-7282|Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CI104_RS12475 60f9e3d5fb3afbef127f56c6d6ce9bbc 286 Gene3D G3DSA:3.40.1190.20 1 286 1.1E-60 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS12475 60f9e3d5fb3afbef127f56c6d6ce9bbc 286 Pfam PF08543 Phosphomethylpyrimidine kinase 74 256 2.7E-14 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CI104_RS02670 eb6963dbff5822f264fe0208689eecfe 210 Pfam PF10707 PhoP regulatory network protein YrbL 2 185 1.6E-62 T 28-03-2018 IPR019647 PhoP regulatory network protein YrbL CI104_RS02670 eb6963dbff5822f264fe0208689eecfe 210 Gene3D G3DSA:1.10.510.10 3 181 1.7E-6 T 28-03-2018 CI104_RS02670 eb6963dbff5822f264fe0208689eecfe 210 SUPERFAMILY SSF56112 13 152 2.41E-8 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 Gene3D G3DSA:3.40.190.10 181 265 5.0E-7 T 28-03-2018 CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 SUPERFAMILY SSF46785 5 88 4.45E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 SUPERFAMILY SSF53850 90 292 3.62E-28 T 28-03-2018 CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 Gene3D G3DSA:1.10.10.10 5 85 1.2E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 Pfam PF03466 LysR substrate binding domain 89 290 8.5E-26 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 Gene3D G3DSA:3.40.190.10 90 180 8.0E-15 T 28-03-2018 CI104_RS16330 90445b9447429ba46053c1a4103a27c6 309 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 64 1.6E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS26145 b18ab235e0ead1f02ab89709dec25f16 135 SUPERFAMILY SSF54001 27 100 1.81E-5 T 28-03-2018 CI104_RS09365 73b033b30913379d6e19f38176a2da1f 75 SUPERFAMILY SSF47413 14 63 2.49E-5 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS09365 73b033b30913379d6e19f38176a2da1f 75 Gene3D G3DSA:1.10.260.40 1 73 3.7E-9 T 28-03-2018 CI104_RS09365 73b033b30913379d6e19f38176a2da1f 75 Pfam PF15943 Putative antitoxin of bacterial toxin-antitoxin system, YdaS/YdaT 12 66 1.9E-11 T 28-03-2018 IPR031856 Putative bacterial antitoxin YdaS CI104_RS15325 afc2926b549e04a55991d398af72118c 289 Pfam PF01380 SIS domain 124 252 3.4E-28 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS15325 afc2926b549e04a55991d398af72118c 289 SUPERFAMILY SSF53697 94 277 5.66E-43 T 28-03-2018 CI104_RS15325 afc2926b549e04a55991d398af72118c 289 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 6.9E-31 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS15325 afc2926b549e04a55991d398af72118c 289 SUPERFAMILY SSF46689 1 80 5.2E-22 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS15325 afc2926b549e04a55991d398af72118c 289 Gene3D G3DSA:3.40.50.10490 80 287 3.9E-37 T 28-03-2018 CI104_RS15325 afc2926b549e04a55991d398af72118c 289 Gene3D G3DSA:1.10.10.10 1 79 2.4E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 433 3.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 398 408 3.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 PRINTS PR00344 Bacterial sensor protein C-terminal signature 380 394 3.4E-14 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 Pfam PF16527 Two-component sensor protein CpxA, periplasmic domain 82 147 9.3E-11 T 28-03-2018 IPR032404 Two-component sensor protein CpxA, periplasmic domain CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 Pfam PF00512 His Kinase A (phospho-acceptor) domain 239 299 4.0E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 Gene3D G3DSA:3.30.565.10 303 457 2.3E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 SUPERFAMILY SSF55874 289 453 1.81E-38 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 SUPERFAMILY SSF47384 224 299 3.73E-16 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 SMART SM00388 238 300 2.8E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 Gene3D G3DSA:1.10.287.130 228 296 8.1E-16 T 28-03-2018 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 SMART SM00387 345 455 4.5E-33 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 SMART SM00304 184 237 1.1E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 Pfam PF00672 HAMP domain 184 234 5.7E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS24230 a91dd487537460066d5fd2ec057c0e16 457 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 346 454 4.3E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 SUPERFAMILY SSF46689 222 271 4.93E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 Pfam PF02311 AraC-like ligand binding domain 24 137 2.3E-22 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 SUPERFAMILY SSF51215 32 138 2.48E-16 T 28-03-2018 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 SUPERFAMILY SSF46689 170 219 4.93E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 Gene3D G3DSA:1.10.10.60 225 274 4.8E-10 T 28-03-2018 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 Gene3D G3DSA:2.60.120.10 5 176 1.2E-4 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 SMART SM00342 186 268 3.2E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 Pfam PF12833 Helix-turn-helix domain 192 269 9.0E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS22375 de24652a6f33a050d1fa7007aef0ab94 274 Gene3D G3DSA:1.10.10.60 177 224 3.0E-17 T 28-03-2018 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 SUPERFAMILY SSF53041 2 136 9.16E-45 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 Gene3D G3DSA:1.20.5.40 106 134 2.2E-15 T 28-03-2018 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 Pfam PF02796 Helix-turn-helix domain of resolvase 138 182 1.6E-11 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 SMART SM00857 2 136 4.9E-56 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 Pfam PF00239 Resolvase, N terminal domain 3 135 3.2E-44 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 Gene3D G3DSA:3.40.50.1390 2 105 2.5E-34 T 28-03-2018 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 SUPERFAMILY SSF46689 138 182 1.75E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS09620 496e45e76c6c83ac08e04767c3479072 183 Gene3D G3DSA:1.10.10.60 138 183 2.9E-7 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 PRINTS PR01100 Shikimate kinase family signature 29 42 5.9E-25 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 PRINTS PR01100 Shikimate kinase family signature 95 112 5.9E-25 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 PRINTS PR01100 Shikimate kinase family signature 74 83 5.9E-25 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 PRINTS PR01100 Shikimate kinase family signature 5 20 5.9E-25 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 PRINTS PR01100 Shikimate kinase family signature 57 65 5.9E-25 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 Hamap MF_01269 Shikimate kinase 2 [aroL]. 1 173 41.449 T 28-03-2018 IPR027544 Shikimate kinase 2 GO:0004765|GO:0009073 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 Pfam PF01202 Shikimate kinase 11 168 2.3E-47 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 Gene3D G3DSA:3.40.50.300 1 173 6.8E-28 T 28-03-2018 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 ProSitePatterns PS01128 Shikimate kinase signature. 58 82 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 Hamap MF_00109 Shikimate kinase [aroK]. 2 169 24.171 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS06090 1d6d8867aef102bb2bc10bd96ee0ebdb 181 SUPERFAMILY SSF52540 5 169 5.4E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 Gene3D G3DSA:3.30.70.20 20 54 7.7E-9 T 28-03-2018 CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 Gene3D G3DSA:3.30.70.20 1 19 0.021 T 28-03-2018 CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 Gene3D G3DSA:3.30.70.20 55 84 4.3E-10 T 28-03-2018 CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 82 93 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 SUPERFAMILY SSF54862 136 182 1.26E-41 T 28-03-2018 CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 SUPERFAMILY SSF54862 2 101 1.26E-41 T 28-03-2018 CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 Gene3D G3DSA:3.30.70.20 85 203 3.3E-16 T 28-03-2018 CI104_RS19830 71986f10688cdc08f2542ec51a71ab41 203 Pfam PF13247 4Fe-4S dicluster domain 47 97 1.1E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 Gene3D G3DSA:3.40.190.10 262 308 2.0E-4 T 28-03-2018 CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 Pfam PF12793 Sugar transport-related sRNA regulator N-term 6 118 1.9E-37 T 28-03-2018 IPR025370 Transcriptional regulator SgrR, N-terminal HTH domain CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 Gene3D G3DSA:1.10.10.10 1 132 2.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 SUPERFAMILY SSF53850 122 561 1.16E-50 T 28-03-2018 CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 168 303 6.0E-14 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 Gene3D G3DSA:3.10.105.10 345 532 0.0014 T 28-03-2018 CI104_RS06460 eb0980769ecb3fdb6b00475a2f080d7e 566 Gene3D G3DSA:3.90.76.10 133 261 3.3E-13 T 28-03-2018 CI104_RS15160 ca0ef17c43f303398e6caa2628ef674c 581 Gene3D G3DSA:3.40.710.10 229 573 5.7E-81 T 28-03-2018 CI104_RS15160 ca0ef17c43f303398e6caa2628ef674c 581 Gene3D G3DSA:3.90.1310.10 29 228 7.1E-43 T 28-03-2018 CI104_RS15160 ca0ef17c43f303398e6caa2628ef674c 581 SUPERFAMILY SSF56601 228 556 4.97E-89 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS15160 ca0ef17c43f303398e6caa2628ef674c 581 Pfam PF00905 Penicillin binding protein transpeptidase domain 253 547 1.4E-79 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS15160 ca0ef17c43f303398e6caa2628ef674c 581 Pfam PF03717 Penicillin-binding Protein dimerisation domain 61 214 2.7E-17 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CI104_RS15160 ca0ef17c43f303398e6caa2628ef674c 581 SUPERFAMILY SSF56519 56 227 9.55E-45 T 28-03-2018 IPR005311 Penicillin-binding protein, dimerisation domain GO:0008658 CI104_RS02750 2b299f380e0c506b82e57a35d89d1093 98 SUPERFAMILY SSF52091 7 91 2.35E-13 T 28-03-2018 IPR002645 STAS domain CI104_RS02750 2b299f380e0c506b82e57a35d89d1093 98 Pfam PF13466 STAS domain 14 90 1.2E-16 T 28-03-2018 IPR002645 STAS domain CI104_RS02750 2b299f380e0c506b82e57a35d89d1093 98 Gene3D G3DSA:3.30.750.24 12 96 1.0E-6 T 28-03-2018 IPR002645 STAS domain CI104_RS02050 af999efcbd0a2375432bf21906bd585c 201 TIGRFAM TIGR03953 rplD_bact: 50S ribosomal protein uL4 13 198 5.6E-75 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02050 af999efcbd0a2375432bf21906bd585c 201 Hamap MF_01328_B 50S ribosomal protein L4 [rplD]. 6 201 33.976 T 28-03-2018 IPR013005 50S ribosomal protein uL4 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02050 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 141 199 1.5E-11 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CI104_RS02050 af999efcbd0a2375432bf21906bd585c 201 Gene3D G3DSA:3.40.1370.10 4 140 7.2E-48 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CI104_RS02050 af999efcbd0a2375432bf21906bd585c 201 SUPERFAMILY SSF52166 10 200 7.06E-73 T 28-03-2018 IPR023574 Ribosomal protein L4 domain GO:0003735|GO:0005840|GO:0006412 CI104_RS02050 af999efcbd0a2375432bf21906bd585c 201 Pfam PF00573 Ribosomal protein L4/L1 family 13 198 3.1E-64 T 28-03-2018 IPR002136 Ribosomal protein L4/L1e GO:0003735|GO:0005840|GO:0006412 CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Pfam PF00226 DnaJ domain 5 66 6.6E-23 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 SUPERFAMILY SSF49493 205 285 6.67E-17 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 SMART SM00271 4 61 9.6E-26 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Pfam PF01556 DnaJ C terminal domain 120 276 1.4E-32 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 PRINTS PR00625 DnaJ domain signature 41 61 2.4E-17 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 PRINTS PR00625 DnaJ domain signature 25 40 2.4E-17 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 PRINTS PR00625 DnaJ domain signature 7 25 2.4E-17 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 PRINTS PR00625 DnaJ domain signature 61 80 2.4E-17 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Gene3D G3DSA:2.60.260.20 204 282 1.4E-19 T 28-03-2018 CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Gene3D G3DSA:1.20.5.460 283 304 4.8E-15 T 28-03-2018 CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 ProSitePatterns PS00636 Nt-dnaJ domain signature. 46 65 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Hamap MF_01154 Curved DNA-binding protein [cbpA]. 1 306 55.277 T 28-03-2018 IPR023859 DNA-binding protein, curved-DNA CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 SUPERFAMILY SSF46565 1 103 6.28E-27 T 28-03-2018 IPR001623 DnaJ domain CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 SUPERFAMILY SSF49493 114 209 5.1E-15 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Gene3D G3DSA:2.60.260.20 115 199 1.4E-15 T 28-03-2018 CI104_RS10065 1e763eb31ea5fa537b5af4dec6c7799c 306 Gene3D G3DSA:1.10.287.110 1 114 3.8E-31 T 28-03-2018 IPR001623 DnaJ domain CI104_RS16635 8c78b8ed4c91c68637d5d8714359364f 453 Pfam PF01136 Peptidase family U32 75 343 5.3E-97 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS16635 8c78b8ed4c91c68637d5d8714359364f 453 Pfam PF16325 Peptidase family U32 C-terminal domain 359 440 2.3E-21 T 28-03-2018 IPR032525 Peptidase family U32, C-terminal CI104_RS16635 8c78b8ed4c91c68637d5d8714359364f 453 Gene3D G3DSA:3.20.20.70 8 170 9.7E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS16635 8c78b8ed4c91c68637d5d8714359364f 453 ProSitePatterns PS01276 Peptidase family U32 signature. 162 180 - T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS15230 08d3133ac2653a2f2b25639f57b926a5 877 Pfam PF02470 MlaD protein 46 137 3.4E-17 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS15230 08d3133ac2653a2f2b25639f57b926a5 877 Pfam PF02470 MlaD protein 394 455 9.2E-6 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS15230 08d3133ac2653a2f2b25639f57b926a5 877 Pfam PF02470 MlaD protein 163 220 3.1E-6 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS15230 08d3133ac2653a2f2b25639f57b926a5 877 Pfam PF02470 MlaD protein 747 809 6.9E-9 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS15230 08d3133ac2653a2f2b25639f57b926a5 877 Pfam PF02470 MlaD protein 280 354 3.3E-7 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS15230 08d3133ac2653a2f2b25639f57b926a5 877 Pfam PF02470 MlaD protein 636 724 4.3E-9 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS24695 f3067ec166befdcf8b8e7ab43257f721 546 SUPERFAMILY SSF56112 94 159 6.41E-49 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS24695 f3067ec166befdcf8b8e7ab43257f721 546 SUPERFAMILY SSF56112 194 438 6.41E-49 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS24695 f3067ec166befdcf8b8e7ab43257f721 546 Hamap MF_00414 Probable protein kinase UbiB [ubiB]. 3 542 56.872 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CI104_RS24695 f3067ec166befdcf8b8e7ab43257f721 546 TIGRFAM TIGR01982 UbiB: 2-polyprenylphenol 6-hydroxylase 7 446 3.5E-186 T 28-03-2018 IPR010232 Probable protein kinase UbiB GO:0006744 CI104_RS24695 f3067ec166befdcf8b8e7ab43257f721 546 Pfam PF03109 ABC1 family 116 232 2.8E-34 T 28-03-2018 IPR004147 UbiB domain CI104_RS24695 f3067ec166befdcf8b8e7ab43257f721 546 Gene3D G3DSA:3.30.200.20 103 245 1.7E-18 T 28-03-2018 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 74 267 2.6E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 376 523 2.1E-8 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 SUPERFAMILY SSF161098 11 265 2.88E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 SUPERFAMILY SSF161098 287 525 1.42E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 Gene3D G3DSA:1.10.3720.10 322 534 1.2E-27 T 28-03-2018 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 Gene3D G3DSA:1.10.3720.10 47 267 3.7E-30 T 28-03-2018 CI104_RS04790 f73ef2835fef84ee79fc2d6ce00bb0e8 536 TIGRFAM TIGR01253 thiP: thiamine/thiamine pyrophosphate ABC transporter, permease protein 8 525 7.5E-281 T 28-03-2018 IPR005947 Thiamine ABC transporter, permease protein GO:0005215|GO:0015888|GO:0016021 CI104_RS21460 2d9c034ad78566796ede8aee5fcef705 426 SUPERFAMILY SSF103473 4 420 2.88E-89 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS21460 2d9c034ad78566796ede8aee5fcef705 426 PIRSF PIRSF002808 1 425 2.8E-37 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS21460 2d9c034ad78566796ede8aee5fcef705 426 Pfam PF07690 Major Facilitator Superfamily 14 379 4.2E-64 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS21460 2d9c034ad78566796ede8aee5fcef705 426 Gene3D G3DSA:1.20.1250.20 216 424 4.5E-27 T 28-03-2018 CI104_RS21460 2d9c034ad78566796ede8aee5fcef705 426 Gene3D G3DSA:1.20.1250.20 1 201 6.2E-46 T 28-03-2018 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 SMART SM00342 185 268 8.5E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 Gene3D G3DSA:2.60.120.10 42 223 5.4E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 SUPERFAMILY SSF46689 169 218 3.7E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 222 264 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 237 252 1.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 252 268 1.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 Gene3D G3DSA:1.10.10.60 224 277 2.0E-16 T 28-03-2018 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 Pfam PF12833 Helix-turn-helix domain 191 270 9.3E-21 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23985 e289be73383c68413c9c542ee1b466b5 283 SUPERFAMILY SSF46689 222 273 3.99E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS24965 cce42ea5532a05a0507bdeb4a18bd1af 247 Gene3D G3DSA:3.40.50.1580 9 239 9.6E-49 T 28-03-2018 CI104_RS24965 cce42ea5532a05a0507bdeb4a18bd1af 247 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 61 76 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS24965 cce42ea5532a05a0507bdeb4a18bd1af 247 SUPERFAMILY SSF53167 1 203 1.23E-63 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS24965 cce42ea5532a05a0507bdeb4a18bd1af 247 Pfam PF01048 Phosphorylase superfamily 15 200 9.2E-36 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 SUPERFAMILY SSF46977 452 588 1.57E-46 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 10 29 7.4E-5 T 28-03-2018 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 368 390 7.4E-5 T 28-03-2018 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 Pfam PF00890 FAD binding domain 9 405 2.3E-118 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 TIGRFAM TIGR01816 sdhA_forward: succinate dehydrogenase, flavoprotein subunit 6 588 7.7E-278 T 28-03-2018 IPR011281 Succinate dehydrogenase, flavoprotein subunit GO:0006099|GO:0016627|GO:0050660|GO:0055114 KEGG: 00020+1.3.5.1|KEGG: 00190+1.3.5.1|KEGG: 00650+1.3.5.1|KEGG: 00720+1.3.5.1|MetaCyc: PWY-3781|MetaCyc: PWY-4302|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7279|Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 SUPERFAMILY SSF56425 236 356 4.78E-42 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 ProSitePatterns PS00504 Fumarate reductase / succinate dehydrogenase FAD-binding site. 43 52 - T 28-03-2018 IPR003952 Fumarate reductase/succinate dehydrogenase, FAD-binding site GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 SUPERFAMILY SSF51905 4 259 4.99E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 SUPERFAMILY SSF51905 359 432 4.99E-75 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 Pfam PF02910 Fumarate reductase flavoprotein C-term 460 588 1.5E-36 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 TIGRFAM TIGR01812 sdhA_frdA_Gneg: succinate dehydrogenase or fumarate reductase, flavoprotein subunit 9 588 1.1E-241 T 28-03-2018 IPR014006 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit GO:0016627|GO:0022900|GO:0050660|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 Gene3D G3DSA:1.20.58.100 431 540 2.9E-37 T 28-03-2018 IPR015939 Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 PIRSF PIRSF000171 1 579 7.1E-47 T 28-03-2018 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 Gene3D G3DSA:4.10.80.40 541 588 3.4E-12 T 28-03-2018 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 Gene3D G3DSA:3.50.50.60 302 430 5.7E-18 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07900 3e6f50ce36147b26163d76529195faa1 588 Gene3D G3DSA:3.50.50.60 3 294 2.9E-48 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 Pfam PF08402 TOBE domain 257 331 5.6E-16 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 SUPERFAMILY SSF52540 5 242 9.63E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 Pfam PF00005 ABC transporter 21 162 3.7E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 SMART SM00382 29 212 1.3E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 SUPERFAMILY SSF50331 239 328 2.61E-9 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 Gene3D G3DSA:2.40.50.140 259 325 4.0E-7 T 28-03-2018 CI104_RS13405 0713a20a650689bd514b667d6bbcad0b 337 Gene3D G3DSA:3.40.50.300 1 240 4.4E-71 T 28-03-2018 CI104_RS10620 1be2edfe832314c32c8a4822ec07705b 179 Pfam PF05433 Glycine zipper 2TM domain 73 113 8.7E-12 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CI104_RS08770 49bb1507ae37ec942c510f47c0629fe3 107 Gene3D G3DSA:3.30.110.70 1 105 1.3E-36 T 28-03-2018 IPR035439 Uncharacterised protein family UPF0145/C2CD5 Reactome: R-HSA-1445148 CI104_RS08770 49bb1507ae37ec942c510f47c0629fe3 107 Pfam PF01906 Putative heavy-metal-binding 1 104 3.7E-40 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CI104_RS08770 49bb1507ae37ec942c510f47c0629fe3 107 Hamap MF_00338 UPF0145 protein YbjQ [ybjQ]. 1 105 24.674 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CI104_RS08770 49bb1507ae37ec942c510f47c0629fe3 107 SUPERFAMILY SSF117782 1 106 1.27E-37 T 28-03-2018 IPR002765 Uncharacterised protein family UPF0145 CI104_RS07320 1faf715dba129d8322835f2264a99407 412 Gene3D G3DSA:1.20.1250.20 212 410 5.6E-14 T 28-03-2018 CI104_RS07320 1faf715dba129d8322835f2264a99407 412 Gene3D G3DSA:1.20.1250.20 9 211 9.6E-23 T 28-03-2018 CI104_RS07320 1faf715dba129d8322835f2264a99407 412 Pfam PF05977 Transmembrane secretion effector 16 405 1.9E-19 T 28-03-2018 IPR010290 Transmembrane secretion effector CI104_RS07320 1faf715dba129d8322835f2264a99407 412 Hamap MF_01436 Enterobactin exporter EntS [entS]. 1 412 43.357 T 28-03-2018 IPR023722 Enterobactin exporter, EntS GO:0005886|GO:0042930|GO:0042931 CI104_RS07320 1faf715dba129d8322835f2264a99407 412 SUPERFAMILY SSF103473 16 404 6.54E-42 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16445 e5ca622e4f29f512df7d408446d090bf 397 SUPERFAMILY SSF53756 20 389 2.79E-35 T 28-03-2018 CI104_RS16445 e5ca622e4f29f512df7d408446d090bf 397 Gene3D G3DSA:3.40.50.2000 209 382 1.4E-23 T 28-03-2018 CI104_RS16445 e5ca622e4f29f512df7d408446d090bf 397 Gene3D G3DSA:3.40.50.2000 21 208 1.0E-4 T 28-03-2018 CI104_RS16445 e5ca622e4f29f512df7d408446d090bf 397 Pfam PF00534 Glycosyl transferases group 1 206 378 5.1E-15 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS11000 edfc2fcb7405e7bef2dca8b18d60bdd1 153 SUPERFAMILY SSF55811 2 135 2.84E-29 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS11000 edfc2fcb7405e7bef2dca8b18d60bdd1 153 PRINTS PR00502 NUDIX hydrolase family signature 31 45 9.0E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS11000 edfc2fcb7405e7bef2dca8b18d60bdd1 153 PRINTS PR00502 NUDIX hydrolase family signature 45 60 9.0E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS11000 edfc2fcb7405e7bef2dca8b18d60bdd1 153 ProSitePatterns PS00893 Nudix box signature. 36 57 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS11000 edfc2fcb7405e7bef2dca8b18d60bdd1 153 Pfam PF00293 NUDIX domain 4 114 2.0E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS11000 edfc2fcb7405e7bef2dca8b18d60bdd1 153 Gene3D G3DSA:3.90.79.10 1 146 7.8E-30 T 28-03-2018 CI104_RS11385 ac74e3172f6ec1237990b4bf9a68b632 163 SMART SM00421 93 150 3.9E-4 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11385 ac74e3172f6ec1237990b4bf9a68b632 163 SUPERFAMILY SSF46894 81 152 2.14E-11 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS11385 ac74e3172f6ec1237990b4bf9a68b632 163 Gene3D G3DSA:1.10.10.10 32 158 3.5E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11385 ac74e3172f6ec1237990b4bf9a68b632 163 Pfam PF00196 Bacterial regulatory proteins, luxR family 96 147 3.8E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 Pfam PF00106 short chain dehydrogenase 2 187 1.4E-53 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 134 162 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 127 135 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 73 84 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 147 166 1.6E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 73 84 1.3E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 121 137 1.3E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 168 185 1.3E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 147 166 1.3E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 2 19 1.3E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 Gene3D G3DSA:3.40.50.720 1 235 3.3E-58 T 28-03-2018 CI104_RS12790 cce782ca3d8f5ad47afd240c5b8a6e04 248 SUPERFAMILY SSF51735 2 231 2.6E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04360 77f84212839774733a3238778e8c99e5 553 Pfam PF00549 CoA-ligase 336 488 5.2E-51 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS04360 77f84212839774733a3238778e8c99e5 553 Gene3D G3DSA:3.40.50.261 325 503 5.8E-10 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS04360 77f84212839774733a3238778e8c99e5 553 Gene3D G3DSA:3.40.50.720 52 170 8.2E-6 T 28-03-2018 CI104_RS04360 77f84212839774733a3238778e8c99e5 553 Pfam PF02629 CoA binding domain 195 287 8.1E-11 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS04360 77f84212839774733a3238778e8c99e5 553 Gene3D G3DSA:3.40.50.261 171 316 6.7E-28 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS04360 77f84212839774733a3238778e8c99e5 553 SUPERFAMILY SSF52210 339 494 6.93E-11 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS04360 77f84212839774733a3238778e8c99e5 553 SUPERFAMILY SSF52210 187 319 1.31E-17 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS20780 4f8be094e7c0491e7348c61e25ff0d93 207 Pfam PF15977 Winged helix-turn-helix DNA binding 138 204 3.0E-27 T 28-03-2018 CI104_RS20780 4f8be094e7c0491e7348c61e25ff0d93 207 Gene3D G3DSA:1.10.10.10 164 207 9.3E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20780 4f8be094e7c0491e7348c61e25ff0d93 207 Hamap MF_02072 Inhibitor of hydrogen peroxide resistance [iprA]. 1 207 42.554 T 28-03-2018 IPR034719 Inhibitor of hydrogen peroxide resistance CI104_RS20780 4f8be094e7c0491e7348c61e25ff0d93 207 SUPERFAMILY SSF51206 30 123 2.78E-6 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CI104_RS02125 dbe782da2b9c8072406e13de5b866cf0 117 Hamap MF_01337_B 50S ribosomal protein L18 [rplR]. 2 117 26.257 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02125 dbe782da2b9c8072406e13de5b866cf0 117 Pfam PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast 1 117 7.1E-44 T 28-03-2018 IPR005484 Ribosomal protein L18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02125 dbe782da2b9c8072406e13de5b866cf0 117 SUPERFAMILY SSF53137 3 115 7.85E-54 T 28-03-2018 CI104_RS02125 dbe782da2b9c8072406e13de5b866cf0 117 Gene3D G3DSA:3.30.420.100 1 117 4.2E-39 T 28-03-2018 CI104_RS02125 dbe782da2b9c8072406e13de5b866cf0 117 TIGRFAM TIGR00060 L18_bact: ribosomal protein uL18 3 117 4.0E-47 T 28-03-2018 IPR004389 Ribosomal protein L18, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS20135 91361c9f16b90d9af36a4532b20122fa 215 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 215 60.368 T 28-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CI104_RS20135 91361c9f16b90d9af36a4532b20122fa 215 Gene3D G3DSA:3.40.225.10 1 213 7.1E-60 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS20135 91361c9f16b90d9af36a4532b20122fa 215 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 181 6.4E-49 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS20135 91361c9f16b90d9af36a4532b20122fa 215 TIGRFAM TIGR01086 fucA: L-fuculose phosphate aldolase 2 215 1.3E-126 T 28-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CI104_RS20135 91361c9f16b90d9af36a4532b20122fa 215 SMART SM01007 8 182 7.7E-69 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS20135 91361c9f16b90d9af36a4532b20122fa 215 SUPERFAMILY SSF53639 1 212 7.26E-68 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS03060 16866066bc6450b2ccb1aef7db85d493 157 SUPERFAMILY SSF52728 3 156 1.31E-51 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS03060 16866066bc6450b2ccb1aef7db85d493 157 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 3 152 2.0E-70 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CI104_RS03060 16866066bc6450b2ccb1aef7db85d493 157 Pfam PF03830 PTS system sorbose subfamily IIB component 4 149 2.3E-50 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS03060 16866066bc6450b2ccb1aef7db85d493 157 Gene3D G3DSA:3.40.35.10 3 157 3.3E-56 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 280 293 1.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 97 113 1.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 226 240 1.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 SUPERFAMILY SSF53335 96 460 5.11E-76 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 441 459 - T 28-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 96 457 9.1E-77 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 Gene3D G3DSA:3.90.120.10 313 447 3.9E-25 T 28-03-2018 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 Gene3D G3DSA:3.40.50.150 87 309 2.0E-56 T 28-03-2018 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 98 459 1.9E-115 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS27945 1ad67c986914325a2dbbc0502d09c217 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 178 190 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CI104_RS21770 21959f249dd5132d94c9076da023f8e7 238 Pfam PF08220 DeoR-like helix-turn-helix domain 14 50 1.2E-4 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS21770 21959f249dd5132d94c9076da023f8e7 238 Gene3D G3DSA:1.10.10.10 2 79 6.4E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21770 21959f249dd5132d94c9076da023f8e7 238 Pfam PF13280 WYL domain 131 195 2.3E-10 T 28-03-2018 IPR026881 WYL domain CI104_RS21770 21959f249dd5132d94c9076da023f8e7 238 ProSitePatterns PS00894 DeoR-type HTH domain signature. 14 48 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 Gene3D G3DSA:3.30.230.10 288 457 1.6E-31 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 SUPERFAMILY SSF54211 258 272 9.86E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 SUPERFAMILY SSF54211 306 457 9.86E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 TIGRFAM TIGR00416 sms: DNA repair protein RadA 1 454 1.6E-239 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 SUPERFAMILY SSF52540 71 291 2.41E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 127 144 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 216 244 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 177 201 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 325 348 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 11 35 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 86 114 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 PRINTS PR01874 DNA repair protein radA signature 251 277 1.6E-93 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 Hamap MF_01498 DNA repair protein RadA [radA]. 22 458 43.325 T 28-03-2018 IPR004504 DNA repair protein RadA GO:0003684|GO:0005524|GO:0006281 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 Pfam PF13481 AAA domain 88 225 2.8E-14 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 SMART SM00382 94 248 3.7E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 Gene3D G3DSA:3.40.50.300 76 286 2.8E-40 T 28-03-2018 CI104_RS21145 553868d1aa8897582206d1219e0aa6a1 460 Pfam PF13541 Subunit ChlI of Mg-chelatase 348 433 1.5E-9 T 28-03-2018 CI104_RS28390 0d117353cbe14cb7b7d8d5a827908768 84 ProDom PD028820 PLASMID TRBE CONJUGATIVE TRANSFER MEMBRANE TRANSMEMBRANE INNER 10 72 8.0E-7 T 28-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE CI104_RS28390 0d117353cbe14cb7b7d8d5a827908768 84 Pfam PF11100 Conjugal transfer protein TrbE 10 71 1.5E-11 T 28-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 SUPERFAMILY SSF100950 76 234 4.5E-30 T 28-03-2018 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 SUPERFAMILY SSF46785 4 72 1.55E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 1.9E-17 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 Pfam PF00455 DeoR C terminal sensor domain 77 232 1.6E-47 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.1E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.1E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 SMART SM00420 6 58 1.5E-24 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 Gene3D G3DSA:3.40.50.1360 75 234 5.4E-35 T 28-03-2018 CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 Gene3D G3DSA:1.10.10.10 4 74 1.7E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11680 cb3952bc293278e47fdf97710194522b 252 SMART SM01134 74 234 2.6E-57 T 28-03-2018 CI104_RS18340 382346eb8b033dbe9481ea7aa28be6d1 191 Gene3D G3DSA:3.90.79.10 1 191 3.4E-36 T 28-03-2018 CI104_RS18340 382346eb8b033dbe9481ea7aa28be6d1 191 SUPERFAMILY SSF55811 11 187 1.03E-48 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS18340 382346eb8b033dbe9481ea7aa28be6d1 191 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 3 185 7.9E-77 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CI104_RS18340 382346eb8b033dbe9481ea7aa28be6d1 191 Pfam PF00293 NUDIX domain 45 163 3.0E-9 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS28515 dd37dddf4ff55aa45118a844c52d8e8b 285 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 9 283 2.0E-177 T 28-03-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type CI104_RS28515 dd37dddf4ff55aa45118a844c52d8e8b 285 Pfam PF02387 IncFII RepA protein family 11 262 1.9E-33 T 28-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 CI104_RS20545 59645bd732c23d78322c66c92433302b 515 Pfam PF02629 CoA binding domain 189 283 1.3E-15 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS20545 59645bd732c23d78322c66c92433302b 515 SUPERFAMILY SSF52210 180 289 1.57E-19 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS20545 59645bd732c23d78322c66c92433302b 515 Pfam PF00549 CoA-ligase 346 503 3.3E-46 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS20545 59645bd732c23d78322c66c92433302b 515 Gene3D G3DSA:3.40.50.720 36 166 8.2E-6 T 28-03-2018 CI104_RS20545 59645bd732c23d78322c66c92433302b 515 Gene3D G3DSA:3.40.50.261 167 515 2.3E-35 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS20545 59645bd732c23d78322c66c92433302b 515 SUPERFAMILY SSF52210 349 507 5.36E-9 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 SUPERFAMILY SSF51182 66 194 1.61E-19 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 Pfam PF07883 Cupin domain 125 194 1.9E-13 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 Pfam PF01381 Helix-turn-helix 26 80 2.0E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 SMART SM00530 25 80 6.0E-12 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 SUPERFAMILY SSF47413 18 83 3.94E-15 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 Gene3D G3DSA:1.10.260.40 16 94 1.9E-14 T 28-03-2018 CI104_RS11415 c2c2c35f5438a5d58d00aa453f7f89af 200 Gene3D G3DSA:2.60.120.10 95 197 5.1E-16 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 Pfam PF01494 FAD binding domain 2 337 1.1E-22 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 Gene3D G3DSA:3.50.50.60 2 352 2.5E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 292 305 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 6.0E-14 T 28-03-2018 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 2 24 6.0E-14 T 28-03-2018 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.0E-14 T 28-03-2018 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 6.0E-14 T 28-03-2018 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 TIGRFAM TIGR01984 UbiH: 2-polyprenyl-6-methoxyphenol 4-hydroxylase 3 388 2.3E-142 T 28-03-2018 IPR011295 2-polyprenyl-6-methoxyphenol 4-hydroxylase GO:0006744|GO:0008681 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 3 387 9.1E-136 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 SUPERFAMILY SSF51905 2 175 1.48E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21085 af673330af6b9e9ccbabf71a4512aa40 392 SUPERFAMILY SSF51905 265 381 1.48E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS06825 098aa556ba26001c8a544d1e6c498f8f 91 Pfam PF04606 Ogr/Delta-like zinc finger 10 56 5.4E-19 T 28-03-2018 IPR007684 Zinc finger, Ogr/Delta-type CI104_RS06825 098aa556ba26001c8a544d1e6c498f8f 91 Gene3D G3DSA:2.20.25.10 9 53 3.3E-5 T 28-03-2018 CI104_RS12540 5ddd5dfee5faaeaa088720ba6d11d208 346 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 134 241 5.2E-20 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS12540 5ddd5dfee5faaeaa088720ba6d11d208 346 Gene3D G3DSA:3.40.50.720 1 135 9.4E-37 T 28-03-2018 CI104_RS12540 5ddd5dfee5faaeaa088720ba6d11d208 346 SUPERFAMILY SSF51735 2 191 7.38E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12540 5ddd5dfee5faaeaa088720ba6d11d208 346 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 5 121 8.4E-26 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS12540 5ddd5dfee5faaeaa088720ba6d11d208 346 Gene3D G3DSA:3.30.360.10 136 346 2.2E-36 T 28-03-2018 CI104_RS16225 64cfb3d4c0c44c55b3fd5783d999b2aa 163 Pfam PF00936 BMC domain 4 80 2.7E-20 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16225 64cfb3d4c0c44c55b3fd5783d999b2aa 163 SUPERFAMILY SSF143414 3 89 2.22E-22 T 28-03-2018 CI104_RS16225 64cfb3d4c0c44c55b3fd5783d999b2aa 163 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 3 66 3.0E-14 T 28-03-2018 CI104_RS16225 64cfb3d4c0c44c55b3fd5783d999b2aa 163 SMART SM00877 3 80 2.9E-25 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS09850 681359f4e050a124e534b76932f0bf43 181 SUPERFAMILY SSF55729 5 139 5.32E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS09850 681359f4e050a124e534b76932f0bf43 181 Gene3D G3DSA:3.40.630.30 86 142 2.5E-7 T 28-03-2018 CI104_RS09850 681359f4e050a124e534b76932f0bf43 181 Gene3D G3DSA:3.40.630.30 1 85 1.2E-10 T 28-03-2018 CI104_RS09850 681359f4e050a124e534b76932f0bf43 181 Pfam PF00583 Acetyltransferase (GNAT) family 18 122 8.4E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS07350 693b965b4f83627b4414a38a2fade10e 137 Gene3D G3DSA:3.10.129.10 1 136 7.3E-28 T 28-03-2018 CI104_RS07350 693b965b4f83627b4414a38a2fade10e 137 SUPERFAMILY SSF54637 1 136 5.81E-31 T 28-03-2018 IPR029069 HotDog domain CI104_RS07350 693b965b4f83627b4414a38a2fade10e 137 Hamap MF_00907 Proofreading thioesterase EntH [entH]. 1 137 54.918 T 28-03-2018 IPR026576 Proofreading thioesterase EntH GO:0009239|GO:0016790 CI104_RS07350 693b965b4f83627b4414a38a2fade10e 137 Pfam PF03061 Thioesterase superfamily 50 127 1.5E-17 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CI104_RS07350 693b965b4f83627b4414a38a2fade10e 137 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 19 134 1.4E-46 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CI104_RS04680 a204ba026ff87b4582586ee9d4c298a1 443 Gene3D G3DSA:1.20.1250.20 222 442 4.9E-31 T 28-03-2018 CI104_RS04680 a204ba026ff87b4582586ee9d4c298a1 443 Pfam PF00083 Sugar (and other) transporter 32 434 2.1E-50 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS04680 a204ba026ff87b4582586ee9d4c298a1 443 SUPERFAMILY SSF103473 8 429 5.36E-75 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS04680 a204ba026ff87b4582586ee9d4c298a1 443 Gene3D G3DSA:1.20.1250.20 12 210 6.4E-33 T 28-03-2018 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Gene3D G3DSA:3.30.750.80 392 491 7.7E-9 T 28-03-2018 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Gene3D G3DSA:3.40.50.150 169 391 1.1E-32 T 28-03-2018 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 SMART SM00981 56 154 6.5E-18 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 195 206 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 SUPERFAMILY SSF53335 258 373 4.25E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 SUPERFAMILY SSF53335 148 217 4.25E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Gene3D G3DSA:3.40.50.150 492 702 7.4E-43 T 28-03-2018 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 303 315 3.0E-5 T 28-03-2018 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 193 207 3.0E-5 T 28-03-2018 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 PIRSF PIRSF037618 1 702 4.3E-296 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 SUPERFAMILY SSF53335 396 698 8.23E-70 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Pfam PF01170 Putative RNA methylase family UPF0020 162 375 7.6E-65 T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Hamap MF_01858 Ribosomal RNA large subunit methyltransferase K/L [rlmL]. 4 702 32.722 T 28-03-2018 IPR017244 Ribosomal RNA large subunit methyltransferase K/L GO:0005737|GO:0008990|GO:0031167 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Pfam PF02926 THUMP domain 19 153 3.3E-19 T 28-03-2018 IPR004114 THUMP domain GO:0003723 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 306 312 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS09205 bdf710bf1443c120119af5d8902ba4fa 702 Pfam PF10672 S-adenosylmethionine-dependent methyltransferase 474 658 6.1E-20 T 28-03-2018 IPR019614 S-adenosylmethionine-dependent methyltransferase GO:0008168 CI104_RS03045 8c2668ad544ec4f7ba63a8664e906ba0 144 SUPERFAMILY SSF53062 1 126 6.28E-33 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS03045 8c2668ad544ec4f7ba63a8664e906ba0 144 Gene3D G3DSA:3.40.50.510 1 143 9.2E-31 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS03045 8c2668ad544ec4f7ba63a8664e906ba0 144 Pfam PF03610 PTS system fructose IIA component 3 113 1.5E-25 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS13690 03b3ff0c60b81aa57689282dfdb53b8a 196 Gene3D G3DSA:2.60.40.1090 26 195 2.2E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS13690 03b3ff0c60b81aa57689282dfdb53b8a 196 Pfam PF00419 Fimbrial protein 28 195 1.6E-11 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS13690 03b3ff0c60b81aa57689282dfdb53b8a 196 SUPERFAMILY SSF49401 27 195 8.45E-21 T 28-03-2018 IPR008966 Adhesion domain CI104_RS13465 d10eb148f5e4a5038806ad1e14922028 297 Pfam PF00892 EamA-like transporter family 150 285 4.6E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS13465 d10eb148f5e4a5038806ad1e14922028 297 Pfam PF00892 EamA-like transporter family 4 134 6.9E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS13465 d10eb148f5e4a5038806ad1e14922028 297 SUPERFAMILY SSF103481 35 138 9.55E-14 T 28-03-2018 CI104_RS13465 d10eb148f5e4a5038806ad1e14922028 297 SUPERFAMILY SSF103481 191 287 1.26E-10 T 28-03-2018 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Gene3D G3DSA:2.20.28.20 144 182 0.21 T 28-03-2018 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 SUPERFAMILY SSF57783 12 49 6.12E-14 T 28-03-2018 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 62 98 3.8E-18 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 145 167 0.13 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 13 49 1.1E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Pfam PF01396 Topoisomerase DNA binding C4 zinc finger 104 142 5.6E-16 T 28-03-2018 IPR013498 DNA topoisomerase, type IA, zn finger GO:0003677|GO:0003916|GO:0005694|GO:0006265 Reactome: R-HSA-5685938|Reactome: R-HSA-5685942|Reactome: R-HSA-5693554|Reactome: R-HSA-5693568|Reactome: R-HSA-5693579|Reactome: R-HSA-5693607|Reactome: R-HSA-5693616|Reactome: R-HSA-6804756|Reactome: R-HSA-69473|Reactome: R-HSA-912446 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 SUPERFAMILY SSF57783 61 99 1.7E-13 T 28-03-2018 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Gene3D G3DSA:3.30.65.10 99 143 2.4E-12 T 28-03-2018 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Gene3D G3DSA:3.30.65.10 58 98 1.6E-17 T 28-03-2018 CI104_RS02230 c3b69636858cc22c501bde3e16721cef 184 Gene3D G3DSA:3.30.65.10 8 57 6.8E-18 T 28-03-2018 CI104_RS07105 bebd336ebde305865cd1523cb90f8475 361 Gene3D G3DSA:2.130.10.10 41 359 1.3E-44 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS07105 bebd336ebde305865cd1523cb90f8475 361 SUPERFAMILY SSF51004 48 347 1.2E-41 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CI104_RS02585 baa5b2f0e445bd2d26851fe518a3a1c4 212 SUPERFAMILY SSF47616 82 208 7.53E-28 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS02585 baa5b2f0e445bd2d26851fe518a3a1c4 212 SUPERFAMILY SSF52833 7 90 2.76E-23 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS02585 baa5b2f0e445bd2d26851fe518a3a1c4 212 Gene3D G3DSA:3.40.30.10 1 88 2.7E-24 T 28-03-2018 CI104_RS02585 baa5b2f0e445bd2d26851fe518a3a1c4 212 Pfam PF00043 Glutathione S-transferase, C-terminal domain 103 194 1.3E-13 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS02585 baa5b2f0e445bd2d26851fe518a3a1c4 212 Gene3D G3DSA:1.20.1050.10 89 209 3.8E-18 T 28-03-2018 CI104_RS02585 baa5b2f0e445bd2d26851fe518a3a1c4 212 Pfam PF02798 Glutathione S-transferase, N-terminal domain 10 81 5.6E-20 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Gene3D G3DSA:3.30.450.40 42 198 1.0E-4 T 28-03-2018 IPR029016 GAF domain-like CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Gene3D G3DSA:3.30.450.20 199 300 4.3E-10 T 28-03-2018 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Gene3D G3DSA:1.10.8.60 491 558 2.8E-13 T 28-03-2018 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 SUPERFAMILY SSF46689 530 625 3.4E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Pfam PF00989 PAS fold 201 301 1.4E-12 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Pfam PF02954 Bacterial regulatory protein, Fis family 583 622 1.4E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 347 360 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Gene3D G3DSA:3.40.50.300 319 490 4.2E-18 T 28-03-2018 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Gene3D G3DSA:1.10.10.60 559 625 2.2E-16 T 28-03-2018 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 Pfam PF00158 Sigma-54 interaction domain 326 484 1.5E-33 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 SMART SM00091 199 266 3.1E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 SUPERFAMILY SSF55785 196 293 1.92E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 SUPERFAMILY SSF52540 327 561 5.82E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 404 419 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 ProSitePatterns PS00018 EF-hand calcium-binding domain. 396 408 - T 28-03-2018 IPR018247 EF-Hand 1, calcium-binding site CI104_RS14570 6996522c56506fa693ed4ac1810ab6f3 633 SMART SM00382 343 482 2.4E-5 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 170 175 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 Pfam PF04002 RadC-like JAB domain 106 219 1.5E-42 T 28-03-2018 IPR025657 RadC-like JAB domain CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 TIGRFAM TIGR00608 radc: DNA repair protein RadC 9 221 2.7E-87 T 28-03-2018 IPR001405 RadC protein CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 SUPERFAMILY SSF47781 14 84 6.99E-10 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 Hamap MF_00018 UPF0758 protein YicR [yicR]. 1 221 52.175 T 28-03-2018 IPR022820 Uncharacterised protein family UPF0758, YicR subfamily CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 Gene3D G3DSA:1.10.150.20 40 84 6.7E-5 T 28-03-2018 CI104_RS00515 6c46e5642527db0504bd6b76bcb7680b 221 Gene3D G3DSA:3.40.140.10 97 221 1.4E-45 T 28-03-2018 CI104_RS20480 01fff949de8f3cb9db9d11fbabca1971 268 SUPERFAMILY SSF46894 32 111 1.33E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS20480 01fff949de8f3cb9db9d11fbabca1971 268 Pfam PF00486 Transcriptional regulatory protein, C terminal 38 109 4.1E-6 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20480 01fff949de8f3cb9db9d11fbabca1971 268 SMART SM00862 35 112 1.0E-5 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20480 01fff949de8f3cb9db9d11fbabca1971 268 Gene3D G3DSA:1.10.10.10 7 119 2.5E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 420 3.0E-161 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 Pfam PF00202 Aminotransferase class-III 17 420 3.8E-145 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 PIRSF PIRSF000521 27 133 0.0042 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 PIRSF PIRSF000521 123 424 3.2E-44 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 SUPERFAMILY SSF53383 20 423 9.55E-136 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 236 273 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 Gene3D G3DSA:3.40.640.10 173 306 2.5E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 Gene3D G3DSA:3.90.1150.10 307 427 2.8E-30 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS19500 70da6ef1bd30385cc0cd8c1d1a8a63c9 427 Gene3D G3DSA:3.90.1150.10 1 156 1.4E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 SUPERFAMILY SSF101386 135 236 5.61E-25 T 28-03-2018 CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 SUPERFAMILY SSF101386 2 105 4.42E-26 T 28-03-2018 CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 Gene3D G3DSA:1.10.287.1080 122 222 5.6E-27 T 28-03-2018 CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 Gene3D G3DSA:1.10.287.1080 3 121 4.3E-42 T 28-03-2018 CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 27 100 2.9E-28 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 Pfam PF03819 MazG nucleotide pyrophosphohydrolase domain 169 227 6.0E-9 T 28-03-2018 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CI104_RS20045 3ec097d30a5da07c2a85f03fc1c63e34 263 TIGRFAM TIGR00444 mazG: MazG family protein 10 257 8.0E-124 T 28-03-2018 IPR011551 NTP pyrophosphohydrolase MazG CI104_RS27500 d433bbe535409c30cc42615279cf61bd 323 Pfam PF01609 Transposase DDE domain 138 312 4.1E-32 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CI104_RS27500 d433bbe535409c30cc42615279cf61bd 323 Pfam PF05598 Transposase domain (DUF772) 51 124 3.5E-21 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Gene3D G3DSA:3.30.70.20 274 313 4.4E-5 T 28-03-2018 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Gene3D G3DSA:3.30.70.20 244 273 0.088 T 28-03-2018 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 SUPERFAMILY SSF142019 5 178 5.23E-47 T 28-03-2018 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Pfam PF10531 SLBB domain 175 219 2.3E-12 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Pfam PF13375 RnfC Barrel sandwich hybrid domain 383 445 4.0E-13 T 28-03-2018 IPR026902 RnfC Barrel sandwich hybrid domain CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 SUPERFAMILY SSF142984 172 240 2.62E-14 T 28-03-2018 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 SUPERFAMILY SSF46548 214 340 5.41E-13 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Pfam PF13534 4Fe-4S dicluster domain 264 324 5.8E-8 T 28-03-2018 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 21 160 1.0E-40 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 Gene3D G3DSA:3.30.70.20 314 429 0.086 T 28-03-2018 CI104_RS16260 4f42d8ff755fae389dea8e26d4b119e6 451 PIRSF PIRSF036408 12 451 2.4E-195 T 28-03-2018 IPR017054 Propanediol utilization protein, PduS, predicted CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 PIRSF PIRSF001589 1 368 1.9E-108 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 PIRSF PIRSF001589 363 510 4.2E-29 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 TIGRFAM TIGR01536 asn_synth_AEB: asparagine synthase (glutamine-hydrolyzing) 2 373 5.8E-125 T 28-03-2018 IPR006426 Asparagine synthase, glutamine-hydrolyzing GO:0004066|GO:0006529 KEGG: 00250+6.3.5.4|Reactome: R-HSA-380994|Reactome: R-HSA-70614 CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 Gene3D G3DSA:3.60.20.10 2 193 3.0E-48 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 Gene3D G3DSA:3.40.50.620 194 514 9.9E-91 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 SUPERFAMILY SSF56235 1 196 2.74E-56 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 SUPERFAMILY SSF52402 210 479 9.36E-76 T 28-03-2018 CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 Pfam PF13537 Glutamine amidotransferase domain 48 165 2.3E-41 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CI104_RS07670 884c1db707d8acfa80ce2bfca9f2b9c3 554 Pfam PF00733 Asparagine synthase 211 366 5.6E-60 T 28-03-2018 IPR001962 Asparagine synthase GO:0004066|GO:0006529 CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 Gene3D G3DSA:3.40.50.300 5 236 2.0E-34 T 28-03-2018 CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 SUPERFAMILY SSF52540 4 225 4.23E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 SMART SM00382 28 215 5.1E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 SMART SM00382 285 480 7.6E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 Gene3D G3DSA:3.40.50.300 243 487 6.1E-43 T 28-03-2018 CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 SUPERFAMILY SSF52540 255 479 1.85E-40 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 Pfam PF00005 ABC transporter 23 163 1.7E-19 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08190 b058215b42b1dfabd981a66d1eae18fc 490 Pfam PF00005 ABC transporter 276 429 1.6E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS22505 8e1aa7122ba5eb2ca123cdfad64e4448 141 Pfam PF02082 Transcriptional regulator 2 82 1.8E-23 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CI104_RS22505 8e1aa7122ba5eb2ca123cdfad64e4448 141 Hamap MF_01177 HTH-type transcriptional repressor NsrR [nsrR]. 1 141 44.439 T 28-03-2018 IPR023761 Transcriptional repressor HTH, NsrR GO:0045892 CI104_RS22505 8e1aa7122ba5eb2ca123cdfad64e4448 141 Gene3D G3DSA:1.10.10.10 1 136 7.0E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22505 8e1aa7122ba5eb2ca123cdfad64e4448 141 TIGRFAM TIGR00738 rrf2_super: Rrf2 family protein 2 128 2.6E-35 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CI104_RS22505 8e1aa7122ba5eb2ca123cdfad64e4448 141 SUPERFAMILY SSF46785 2 131 3.78E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 Gene3D G3DSA:2.40.50.180 45 108 3.0E-10 T 28-03-2018 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 Gene3D G3DSA:3.40.50.2300 180 331 1.7E-21 T 28-03-2018 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 PIRSF PIRSF002867 1 320 2.5E-106 T 28-03-2018 IPR024181 Chemotaxis response regulator CheV CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 SMART SM00448 187 312 3.5E-11 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 SMART SM00260 17 161 2.9E-13 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 Gene3D G3DSA:2.30.30.40 109 147 3.9E-5 T 28-03-2018 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 Pfam PF01584 CheW-like domain 22 163 4.1E-30 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 SUPERFAMILY SSF52172 189 319 7.4E-21 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 SUPERFAMILY SSF50341 18 165 2.35E-24 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CI104_RS17485 3731b4f30526fcf9c03732947d2b0ceb 334 Pfam PF00072 Response regulator receiver domain 190 311 2.1E-12 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 SUPERFAMILY SSF141734 6 121 9.94E-47 T 28-03-2018 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 Pfam PF01503 Phosphoribosyl-ATP pyrophosphohydrolase 116 202 1.9E-16 T 28-03-2018 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like KEGG: 00340+3.6.1.31 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 ProDom PD002610 PHOSPHORIBOSYL-AMP BIOSYNTHESIS CYCLOHYDROLASE HYDROLASE HISTIDINE AMINO-ACID PRA-CH PHOSPHORIBOSYL-ATP BIFUNCTIONAL INCLUDES: 56 105 4.0E-24 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 Hamap MF_01020 Phosphoribosyl-ATP pyrophosphatase [hisE]. 112 198 17.413 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 Gene3D G3DSA:1.10.287.1080 111 203 2.4E-18 T 28-03-2018 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 Hamap MF_01019 Histidine biosynthesis bifunctional protein HisIE [hisI]. 8 203 37.561 T 28-03-2018 IPR023019 Histidine biosynthesis bifunctional protein HisIE GO:0000105|GO:0004635|GO:0004636 KEGG: 00340+3.6.1.31+3.5.4.19 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 Pfam PF01502 Phosphoribosyl-AMP cyclohydrolase 33 105 3.4E-31 T 28-03-2018 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain GO:0000105|GO:0004635 KEGG: 00340+3.5.4.19 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 TIGRFAM TIGR03188 histidine_hisI: phosphoribosyl-ATP diphosphatase 115 198 8.9E-29 T 28-03-2018 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase GO:0000105|GO:0004636 KEGG: 00340+3.6.1.31 CI104_RS16380 240758ac49aae9058ba761b26b41091b 203 SUPERFAMILY SSF101386 115 202 2.62E-22 T 28-03-2018 CI104_RS24255 af0bf358dfcdbac2361e2fa17718c158 344 TIGRFAM TIGR00776 RhaT: RhaT L-rhamnose-proton symporter family protein 7 342 5.2E-112 T 28-03-2018 CI104_RS24255 af0bf358dfcdbac2361e2fa17718c158 344 Hamap MF_01532 L-rhamnose-proton symporter [rhaT]. 1 344 47.128 T 28-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 CI104_RS24255 af0bf358dfcdbac2361e2fa17718c158 344 Pfam PF06379 L-rhamnose-proton symport protein (RhaT) 1 344 1.8E-220 T 28-03-2018 IPR004673 L-rhamnose-proton symport, RhaT GO:0008645|GO:0015153|GO:0016021 CI104_RS03035 70b5959aeaadcb778de9d1be496a2977 384 Gene3D G3DSA:3.40.50.10490 8 190 3.5E-26 T 28-03-2018 CI104_RS03035 70b5959aeaadcb778de9d1be496a2977 384 SUPERFAMILY SSF53697 15 373 1.09E-51 T 28-03-2018 CI104_RS03035 70b5959aeaadcb778de9d1be496a2977 384 TIGRFAM TIGR02815 agaS_fam: putative sugar isomerase, AgaS family 13 382 8.1E-184 T 28-03-2018 IPR014180 Sugar isomerase, AgaS GO:0016861 CI104_RS03035 70b5959aeaadcb778de9d1be496a2977 384 Pfam PF01380 SIS domain 224 356 4.9E-19 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS03035 70b5959aeaadcb778de9d1be496a2977 384 Pfam PF01380 SIS domain 49 188 1.6E-27 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS03035 70b5959aeaadcb778de9d1be496a2977 384 Gene3D G3DSA:3.40.50.10490 221 373 2.8E-19 T 28-03-2018 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PIRSF PIRSF019404 1 147 4.1E-50 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 Pfam PF02050 Flagellar FliJ protein 19 141 4.1E-34 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 108 126 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 4 26 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 44 61 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 86 107 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 63 84 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 27 43 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 PRINTS PR01004 Flagellar FliJ protein signature 126 146 5.2E-78 T 28-03-2018 IPR018006 Flagellar FliJ, proteobacteria GO:0003774|GO:0006935|GO:0009288|GO:0016020|GO:0071973 CI104_RS15865 bb04db8f35e9d13b68cbce69990e8e5a 147 TIGRFAM TIGR02473 flagell_FliJ: flagellar export protein FliJ 6 144 7.6E-29 T 28-03-2018 IPR012823 Flagellar export FliJ GO:0009288|GO:0071973 CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 Gene3D G3DSA:1.20.120.530 115 262 1.4E-24 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 Gene3D G3DSA:1.10.10.10 26 103 4.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 SUPERFAMILY SSF46785 28 99 4.12E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 Pfam PF00392 Bacterial regulatory proteins, gntR family 32 95 9.8E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 SUPERFAMILY SSF48008 119 252 2.01E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 Pfam PF07729 FCD domain 125 246 5.0E-21 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 Hamap MF_01236 Transcriptional regulator NanR [nanR]. 4 257 62.608 T 28-03-2018 IPR023730 HTH-type transcriptional repressor NanR CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 SMART SM00345 36 95 2.3E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 SMART SM00895 123 247 4.9E-17 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 69 85 5.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS02595 d74d1ddc6f4523304d70025d46db42d3 263 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 55 69 5.6E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS13280 f699d79139fa44ec07a131d0176d39ec 75 SUPERFAMILY SSF55331 2 74 8.66E-18 T 28-03-2018 IPR014347 Tautomerase/MIF superfamily CI104_RS13280 f699d79139fa44ec07a131d0176d39ec 75 Hamap MF_00718 Tautomerase PptA [pptA]. 1 75 28.459 T 28-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 CI104_RS13280 f699d79139fa44ec07a131d0176d39ec 75 Gene3D G3DSA:3.30.429.10 2 65 2.9E-19 T 28-03-2018 CI104_RS13280 f699d79139fa44ec07a131d0176d39ec 75 Pfam PF01361 Tautomerase enzyme 2 53 7.5E-14 T 28-03-2018 IPR004370 4-oxalocrotonate tautomerase GO:0006725|GO:0016853 CI104_RS13280 f699d79139fa44ec07a131d0176d39ec 75 PIRSF PIRSF037799 1 75 9.0E-29 T 28-03-2018 IPR017284 Tautomerase PptA GO:0005737|GO:0016862 CI104_RS03250 9d4a5ec5ab359f02a805810e977861a4 433 Gene3D G3DSA:1.20.1250.20 214 420 7.2E-24 T 28-03-2018 CI104_RS03250 9d4a5ec5ab359f02a805810e977861a4 433 SUPERFAMILY SSF103473 3 412 5.1E-81 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS03250 9d4a5ec5ab359f02a805810e977861a4 433 Gene3D G3DSA:1.20.1250.20 1 202 8.8E-40 T 28-03-2018 CI104_RS03250 9d4a5ec5ab359f02a805810e977861a4 433 Pfam PF07690 Major Facilitator Superfamily 301 420 1.9E-8 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS03250 9d4a5ec5ab359f02a805810e977861a4 433 Pfam PF07690 Major Facilitator Superfamily 16 287 5.4E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS03250 9d4a5ec5ab359f02a805810e977861a4 433 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 17 411 2.4E-126 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 Pfam PF07729 FCD domain 89 208 3.3E-26 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 SUPERFAMILY SSF46785 7 102 9.46E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 Pfam PF00392 Bacterial regulatory proteins, gntR family 15 75 5.3E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 SUPERFAMILY SSF48008 82 213 6.28E-27 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 SMART SM00345 17 75 5.6E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 Gene3D G3DSA:1.10.10.10 1 71 1.4E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 SMART SM00895 85 209 1.0E-18 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS12785 40b0c8a6e9b67f9c630f017c630eb053 228 Gene3D G3DSA:1.20.120.530 72 228 3.5E-30 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS02055 173fb2cdaacd3678a7968e3a88b6734e 100 Pfam PF00276 Ribosomal protein L23 9 95 5.9E-31 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CI104_RS02055 173fb2cdaacd3678a7968e3a88b6734e 100 SUPERFAMILY SSF54189 6 97 2.84E-30 T 28-03-2018 IPR012678 Ribosomal protein L23/L15e core domain GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02055 173fb2cdaacd3678a7968e3a88b6734e 100 Hamap MF_01369_B 50S ribosomal protein L23 [rplW]. 8 98 22.535 T 28-03-2018 IPR013025 Ribosomal protein L25/L23 GO:0003735|GO:0005840|GO:0006412 CI104_RS02055 173fb2cdaacd3678a7968e3a88b6734e 100 ProSitePatterns PS00050 Ribosomal protein L23 signature. 81 96 - T 28-03-2018 IPR001014 Ribosomal protein L23/L25, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02055 173fb2cdaacd3678a7968e3a88b6734e 100 Gene3D G3DSA:3.30.70.330 6 100 2.0E-30 T 28-03-2018 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 Pfam PF00239 Resolvase, N terminal domain 3 135 8.2E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 SUPERFAMILY SSF53041 1 136 4.05E-48 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 Pfam PF02796 Helix-turn-helix domain of resolvase 138 181 3.8E-12 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 SUPERFAMILY SSF46689 138 182 1.25E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 ProSitePatterns PS00397 Site-specific recombinases active site. 5 13 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 Gene3D G3DSA:1.20.5.40 107 134 7.5E-20 T 28-03-2018 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 Gene3D G3DSA:1.10.10.60 138 184 1.1E-8 T 28-03-2018 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 Gene3D G3DSA:3.40.50.1390 2 106 1.8E-35 T 28-03-2018 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 ProSitePatterns PS00398 Site-specific recombinases signature 2. 55 67 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS14715 28743509aabec28a808dfbafbc00460a 184 SMART SM00857 2 136 4.8E-60 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS16415 42dd2c3b5da0e81e3e1181be8344f73f 324 Pfam PF02655 ATP-grasp domain 115 270 2.3E-8 T 28-03-2018 IPR003806 ATP-grasp fold, DUF201-type GO:0005524|GO:0046872 CI104_RS16415 42dd2c3b5da0e81e3e1181be8344f73f 324 Gene3D G3DSA:3.40.50.20 2 116 6.3E-14 T 28-03-2018 CI104_RS16415 42dd2c3b5da0e81e3e1181be8344f73f 324 SUPERFAMILY SSF56059 111 291 3.36E-18 T 28-03-2018 CI104_RS16415 42dd2c3b5da0e81e3e1181be8344f73f 324 Gene3D G3DSA:3.30.1490.20 117 175 9.9E-4 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS16415 42dd2c3b5da0e81e3e1181be8344f73f 324 Gene3D G3DSA:3.30.470.20 217 294 3.1E-9 T 28-03-2018 CI104_RS28150 5153e65840386ce717c525bcfd16b42d 451 Pfam PF12083 Domain of unknown function (DUF3560) 88 206 7.8E-39 T 28-03-2018 IPR021944 Protein of unknown function DUF3560 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 Gene3D G3DSA:1.10.10.60 184 242 2.5E-15 T 28-03-2018 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 SMART SM00342 203 286 1.8E-32 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 240 282 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 270 286 1.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 270 1.9E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 Pfam PF12833 Helix-turn-helix domain 209 287 2.7E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 Gene3D G3DSA:1.10.10.60 243 289 1.9E-15 T 28-03-2018 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 SUPERFAMILY SSF46689 189 237 8.96E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13460 e460164426dc49a551e8325bd5507087 289 SUPERFAMILY SSF46689 239 288 2.2E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 Pfam PF01595 Domain of unknown function DUF21 2 169 5.3E-48 T 28-03-2018 IPR002550 Domain of unknown function DUF21 CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 Gene3D G3DSA:3.10.580.10 170 323 1.0E-19 T 28-03-2018 CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 Pfam PF00571 CBS domain 263 311 1.6E-4 T 28-03-2018 IPR000644 CBS domain CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 SMART SM01091 327 405 8.0E-25 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 Gene3D G3DSA:3.30.465.10 324 413 4.8E-19 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 SUPERFAMILY SSF56176 325 407 3.0E-21 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 SUPERFAMILY SSF54631 177 314 8.59E-22 T 28-03-2018 CI104_RS19045 134c3ea8f36a09450c967e3611a741f0 413 Pfam PF03471 Transporter associated domain 329 403 2.9E-18 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS20690 dd82f71617a6fce259faa2f22ea181d9 432 PIRSF PIRSF004539 1 432 3.1E-128 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS20690 dd82f71617a6fce259faa2f22ea181d9 432 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 432 1.8E-125 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS20690 dd82f71617a6fce259faa2f22ea181d9 432 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 359 1.0E-118 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 Pfam PF06628 Catalase-related immune-responsive 498 561 3.0E-16 T 28-03-2018 IPR010582 Catalase immune-responsive domain KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 ProSitePatterns PS00437 Catalase proximal heme-ligand signature. 410 418 - T 28-03-2018 IPR002226 Catalase haem-binding site GO:0020037 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 SMART SM01060 80 468 8.9E-272 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PIRSF PIRSF038927 46 750 0.0 T 28-03-2018 IPR024712 Catalase, mono-functional, haem-containing, clade 2 GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 ProSitePatterns PS00438 Catalase proximal active site signature. 116 132 - T 28-03-2018 IPR024708 Catalase active site GO:0004096 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 Pfam PF00199 Catalase 80 465 6.4E-177 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 SUPERFAMILY SSF56634 45 582 2.62E-223 T 28-03-2018 IPR020835 Catalase-like domain GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PRINTS PR00067 Catalase signature 156 174 8.0E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PRINTS PR00067 Catalase signature 365 392 8.0E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PRINTS PR00067 Catalase signature 93 116 8.0E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PRINTS PR00067 Catalase signature 196 214 8.0E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PRINTS PR00067 Catalase signature 397 423 8.0E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 PRINTS PR00067 Catalase signature 177 194 8.0E-67 T 28-03-2018 IPR018028 Catalase, mono-functional, haem-containing GO:0004096|GO:0006979|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 Gene3D G3DSA:2.40.180.10 50 435 4.4E-164 T 28-03-2018 IPR011614 Catalase core domain GO:0004096|GO:0020037|GO:0055114 KEGG: 00380+1.11.1.6|KEGG: 00630+1.11.1.6|Reactome: R-HSA-3299685|Reactome: R-HSA-6798695 CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 Gene3D G3DSA:3.40.50.880 599 752 5.1E-15 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS11865 d63627adfc4da0e27a27d132c14fa50f 752 SUPERFAMILY SSF52317 597 743 1.77E-13 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 6.0E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 SUPERFAMILY SSF53850 92 297 2.28E-50 T 28-03-2018 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 Gene3D G3DSA:1.10.10.10 1 81 1.7E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 Gene3D G3DSA:3.40.190.10 179 268 2.2E-23 T 28-03-2018 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 Pfam PF03466 LysR substrate binding domain 90 292 1.1E-50 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 Gene3D G3DSA:3.40.190.10 90 178 1.3E-22 T 28-03-2018 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.2E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS19430 659128e25de27abb88d0c097e158c4ff 308 SUPERFAMILY SSF46785 4 113 1.15E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25005 33ab7387429b07f2f8ffb21dfb14ae7a 309 Gene3D G3DSA:3.20.10.10 143 303 4.2E-51 T 28-03-2018 CI104_RS25005 33ab7387429b07f2f8ffb21dfb14ae7a 309 SUPERFAMILY SSF56752 7 307 1.44E-105 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CI104_RS25005 33ab7387429b07f2f8ffb21dfb14ae7a 309 ProSitePatterns PS00770 Aminotransferases class-IV signature. 194 223 - T 28-03-2018 IPR018300 Aminotransferase, class IV, conserved site GO:0003824|GO:0008152 Reactome: R-HSA-70895 CI104_RS25005 33ab7387429b07f2f8ffb21dfb14ae7a 309 Pfam PF01063 Amino-transferase class IV 36 268 8.3E-50 T 28-03-2018 IPR001544 Aminotransferase class IV GO:0003824|GO:0008152 Reactome: R-HSA-70895 CI104_RS25005 33ab7387429b07f2f8ffb21dfb14ae7a 309 Gene3D G3DSA:3.30.470.10 1 142 2.3E-43 T 28-03-2018 CI104_RS25005 33ab7387429b07f2f8ffb21dfb14ae7a 309 TIGRFAM TIGR01122 ilvE_I: branched-chain amino acid aminotransferase 10 307 6.7E-146 T 28-03-2018 IPR005785 Branched-chain amino acid aminotransferase I GO:0004084|GO:0009081 KEGG: 00270+2.6.1.42|KEGG: 00280+2.6.1.42|KEGG: 00290+2.6.1.42|KEGG: 00770+2.6.1.42|KEGG: 00966+2.6.1.42|MetaCyc: PWY-5057|MetaCyc: PWY-5076|MetaCyc: PWY-5078|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-5108|MetaCyc: PWY-7767 CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 Pfam PF00288 GHMP kinases N terminal domain 91 148 1.4E-10 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 Pfam PF08544 GHMP kinases C terminal 214 265 1.5E-6 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 PIRSF PIRSF010376 1 283 5.0E-86 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 Gene3D G3DSA:3.30.230.10 3 164 1.6E-45 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 Hamap MF_00061 Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase [ispE]. 3 275 32.689 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 SUPERFAMILY SSF55060 165 280 1.49E-36 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 Gene3D G3DSA:3.30.70.890 165 283 1.4E-25 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 TIGRFAM TIGR00154 ispE: 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 2 282 1.4E-115 T 28-03-2018 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase GO:0016114|GO:0050515 KEGG: 00710+2.7.1.14|KEGG: 00900+2.7.1.148|MetaCyc: PWY-7560 CI104_RS14450 93ad8054c772b277879336e156c3e1fb 283 SUPERFAMILY SSF54211 1 162 9.11E-50 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS20795 20d61757b8ffadf0532ae8d785b3fc38 266 Gene3D G3DSA:3.40.50.300 2 266 4.0E-73 T 28-03-2018 CI104_RS20795 20d61757b8ffadf0532ae8d785b3fc38 266 SUPERFAMILY SSF52540 5 245 7.17E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20795 20d61757b8ffadf0532ae8d785b3fc38 266 SMART SM00382 34 223 1.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20795 20d61757b8ffadf0532ae8d785b3fc38 266 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS20795 20d61757b8ffadf0532ae8d785b3fc38 266 Pfam PF00005 ABC transporter 25 173 1.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS05050 1b6e9d1b113c4174f39b28e1b121719e 423 Gene3D G3DSA:3.40.50.10840 3 234 1.1E-65 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CI104_RS05050 1b6e9d1b113c4174f39b28e1b121719e 423 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 240 409 1.1E-39 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain CI104_RS05050 1b6e9d1b113c4174f39b28e1b121719e 423 Pfam PF07005 Putative sugar-binding N-terminal domain 3 225 2.2E-60 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CI104_RS05050 1b6e9d1b113c4174f39b28e1b121719e 423 SUPERFAMILY SSF142764 4 416 1.02E-98 T 28-03-2018 CI104_RS04630 1068fe6ef21da5c92405e8cb57a026bd 198 SUPERFAMILY SSF51161 3 166 6.52E-41 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS04630 1068fe6ef21da5c92405e8cb57a026bd 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 12 41 7.4E-5 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS04630 1068fe6ef21da5c92405e8cb57a026bd 198 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 88 122 7.2E-8 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS04630 1068fe6ef21da5c92405e8cb57a026bd 198 Hamap MF_01525 Carnitine operon protein CaiE [caiE]. 1 196 56.759 T 28-03-2018 IPR023446 Carnitine operon protein CaiE CI104_RS04630 1068fe6ef21da5c92405e8cb57a026bd 198 Gene3D G3DSA:2.160.10.10 4 174 1.9E-36 T 28-03-2018 CI104_RS02660 6a4b0519aaf2eb3692109159228120f3 217 SUPERFAMILY SSF52317 1 216 1.29E-64 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS02660 6a4b0519aaf2eb3692109159228120f3 217 Gene3D G3DSA:3.40.50.880 2 217 8.2E-40 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS02660 6a4b0519aaf2eb3692109159228120f3 217 PIRSF PIRSF006320 1 216 1.5E-103 T 28-03-2018 IPR026041 Glyoxalase ElbB CI104_RS07760 a7f633285887afafc473dd2ce37c47b1 257 Gene3D G3DSA:3.40.50.1820 1 254 1.5E-53 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS07760 a7f633285887afafc473dd2ce37c47b1 257 Pfam PF12697 Alpha/beta hydrolase family 19 246 1.6E-17 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS07760 a7f633285887afafc473dd2ce37c47b1 257 SUPERFAMILY SSF53474 12 253 3.75E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS00355 aadc4389b73b0e029745d6a5c064cdd2 138 Pfam PF10604 Polyketide cyclase / dehydrase and lipid transport 1 135 1.2E-29 T 28-03-2018 IPR019587 Polyketide cyclase/dehydrase CI104_RS00355 aadc4389b73b0e029745d6a5c064cdd2 138 SUPERFAMILY SSF55961 1 134 4.55E-37 T 28-03-2018 CI104_RS00355 aadc4389b73b0e029745d6a5c064cdd2 138 Gene3D G3DSA:3.30.530.20 2 137 3.0E-33 T 28-03-2018 IPR023393 START-like domain CI104_RS14125 6280817e054c1dd109e42a8b82c5ce18 196 Pfam PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP 28 196 1.7E-59 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS14125 6280817e054c1dd109e42a8b82c5ce18 196 SUPERFAMILY SSF52540 7 196 7.84E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14125 6280817e054c1dd109e42a8b82c5ce18 196 PIRSF PIRSF015617 1 196 2.3E-70 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS14125 6280817e054c1dd109e42a8b82c5ce18 196 TIGRFAM TIGR00708 cobA: cob(I)yrinic acid a,c-diamide adenosyltransferase 24 196 2.0E-81 T 28-03-2018 IPR003724 ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR GO:0005524|GO:0008817|GO:0009236 KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269 CI104_RS14125 6280817e054c1dd109e42a8b82c5ce18 196 Gene3D G3DSA:3.40.50.300 6 196 3.9E-72 T 28-03-2018 CI104_RS17700 6656cd1f847a1c3350c26bdc58fcfcae 189 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 3 186 6.7E-69 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CI104_RS17700 6656cd1f847a1c3350c26bdc58fcfcae 189 Pfam PF02441 Flavoprotein 2 165 3.1E-24 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS17700 6656cd1f847a1c3350c26bdc58fcfcae 189 SUPERFAMILY SSF52507 2 188 1.7E-60 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS17700 6656cd1f847a1c3350c26bdc58fcfcae 189 Gene3D G3DSA:3.40.50.1950 2 189 1.5E-52 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS17700 6656cd1f847a1c3350c26bdc58fcfcae 189 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 2 188 37.214 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 23 39 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 13 397 1.1E-152 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 Pfam PF03222 Tryptophan/tyrosine permease family 8 403 4.9E-146 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 16 39 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 154 174 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 350 369 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 329 347 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 195 217 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 88 108 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 43 62 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 295 314 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS25250 bbde9506f01e3c9654a40b575361e869 416 PRINTS PR00166 Aromatic amino acid permease signature 234 253 6.1E-101 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS09930 351e685b913773bebc3723384711a8bf 345 Gene3D G3DSA:3.90.180.10 1 156 4.7E-47 T 28-03-2018 CI104_RS09930 351e685b913773bebc3723384711a8bf 345 SMART SM00829 9 335 7.2E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS09930 351e685b913773bebc3723384711a8bf 345 SUPERFAMILY SSF50129 1 179 1.17E-45 T 28-03-2018 IPR011032 GroES-like CI104_RS09930 351e685b913773bebc3723384711a8bf 345 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 27 133 1.5E-28 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS09930 351e685b913773bebc3723384711a8bf 345 Gene3D G3DSA:3.40.50.10730 157 323 1.4E-27 T 28-03-2018 CI104_RS09930 351e685b913773bebc3723384711a8bf 345 SUPERFAMILY SSF51735 136 305 2.47E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS09930 351e685b913773bebc3723384711a8bf 345 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 59 73 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS09930 351e685b913773bebc3723384711a8bf 345 Pfam PF00107 Zinc-binding dehydrogenase 174 296 1.1E-26 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 Gene3D G3DSA:3.30.70.20 198 236 3.7E-19 T 28-03-2018 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 SUPERFAMILY SSF54862 1 503 1.57E-184 T 28-03-2018 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 Gene3D G3DSA:3.30.70.20 365 466 1.0E-30 T 28-03-2018 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 Gene3D G3DSA:3.30.70.20 237 364 7.1E-31 T 28-03-2018 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 TIGRFAM TIGR01660 narH: nitrate reductase, beta subunit 1 492 0.0 T 28-03-2018 IPR006547 Nitrate reductase, beta subunit GO:0008940|GO:0009325|GO:0042126|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 Gene3D G3DSA:3.30.70.20 5 197 2.0E-28 T 28-03-2018 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 Pfam PF14711 Respiratory nitrate reductase beta C-terminal 358 436 2.6E-30 T 28-03-2018 IPR029263 Respiratory nitrate reductase beta, C-terminal KEGG: 00910+1.7.99.4 CI104_RS14355 742d34e7e6797171fcc20668fab5391a 510 Pfam PF13247 4Fe-4S dicluster domain 175 271 7.5E-37 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS18180 833b9cb2ce4e4549466621da4b4844c7 277 TIGRFAM TIGR00969 3a0106s02: sulfate ABC transporter, permease protein 5 269 5.7E-116 T 28-03-2018 IPR005667 Sulphate ABC transporter permease protein 2 GO:0008272|GO:0015419|GO:0016020 CI104_RS18180 833b9cb2ce4e4549466621da4b4844c7 277 Gene3D G3DSA:1.10.3720.10 12 275 5.3E-48 T 28-03-2018 CI104_RS18180 833b9cb2ce4e4549466621da4b4844c7 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 76 274 1.8E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS18180 833b9cb2ce4e4549466621da4b4844c7 277 SUPERFAMILY SSF161098 16 264 2.22E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS18180 833b9cb2ce4e4549466621da4b4844c7 277 TIGRFAM TIGR02139 permease_CysT: sulfate ABC transporter, permease protein CysT 9 271 1.6E-114 T 28-03-2018 IPR011865 Sulphate ABC transporter, permease protein CysT GO:0008272|GO:0015116|GO:0016021 CI104_RS17465 09e11d354b985bb1ce898b2a50c7a859 432 Pfam PF00425 chorismate binding enzyme 169 420 4.1E-63 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CI104_RS17465 09e11d354b985bb1ce898b2a50c7a859 432 Hamap MF_01935 Isochorismate synthase MenF [menF]. 3 430 30.088 T 28-03-2018 IPR034681 Isochorismate synthase MenF GO:0008909|GO:0009234 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CI104_RS17465 09e11d354b985bb1ce898b2a50c7a859 432 SUPERFAMILY SSF56322 20 428 8.5E-101 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS17465 09e11d354b985bb1ce898b2a50c7a859 432 TIGRFAM TIGR00543 isochor_syn: isochorismate synthase 93 427 8.9E-110 T 28-03-2018 IPR004561 Isochorismate synthase GO:0008909|GO:0009058 KEGG: 00130+5.4.4.2|MetaCyc: PWY-5837|MetaCyc: PWY-5901|MetaCyc: PWY-6406 CI104_RS17465 09e11d354b985bb1ce898b2a50c7a859 432 Gene3D G3DSA:3.60.120.10 1 431 9.9E-93 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 1 82 2.6E-31 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 Pfam PF00381 PTS HPr component phosphorylation site 3 82 1.2E-28 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 13 20 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 Gene3D G3DSA:3.30.1340.10 1 85 2.8E-32 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 SUPERFAMILY SSF55594 1 82 1.44E-27 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 38 53 2.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 53 70 2.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 PRINTS PR00107 Phosphocarrier protein signature 13 29 2.5E-20 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS18130 30f33c2d8de065a355696e4e16a20b30 85 ProSitePatterns PS00589 PTS HPR domain serine phosphorylation site signature. 39 54 - T 28-03-2018 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CI104_RS20170 8e9f0bdcb9dac3dce4a22a7829caf413 140 Gene3D G3DSA:3.40.1650.10 1 140 5.7E-48 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS20170 8e9f0bdcb9dac3dce4a22a7829caf413 140 Pfam PF05025 RbsD / FucU transport protein family 3 139 4.4E-35 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS20170 8e9f0bdcb9dac3dce4a22a7829caf413 140 Hamap MF_01662 L-fucose mutarotase [fucU]. 1 140 45.683 T 28-03-2018 IPR023751 L-fucose mutarotase GO:0016854|GO:0042354|GO:0042806 CI104_RS20170 8e9f0bdcb9dac3dce4a22a7829caf413 140 SUPERFAMILY SSF102546 1 139 7.19E-39 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS20655 2a4eca8aeecef990327ecc5335d2f50d 301 SUPERFAMILY SSF49401 182 301 1.19E-25 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20655 2a4eca8aeecef990327ecc5335d2f50d 301 Pfam PF00419 Fimbrial protein 175 301 1.7E-8 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20655 2a4eca8aeecef990327ecc5335d2f50d 301 Gene3D G3DSA:2.60.40.1090 23 180 1.4E-60 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20655 2a4eca8aeecef990327ecc5335d2f50d 301 Gene3D G3DSA:2.60.40.1090 181 301 7.4E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20655 2a4eca8aeecef990327ecc5335d2f50d 301 SUPERFAMILY SSF49401 23 180 7.95E-64 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20655 2a4eca8aeecef990327ecc5335d2f50d 301 Pfam PF09160 FimH, mannose binding 25 169 1.1E-61 T 28-03-2018 IPR015243 FimH, mannose-binding domain CI104_RS24155 56e0250430bb4b42318552a98e02468e 139 Pfam PF05656 Protein of unknown function (DUF805) 8 132 2.7E-21 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CI104_RS27635 dc8b78d7c506f252c565715b696b75da 263 Gene3D G3DSA:3.40.30.10 77 263 1.9E-34 T 28-03-2018 CI104_RS27635 dc8b78d7c506f252c565715b696b75da 263 Pfam PF13462 Thioredoxin 86 227 2.5E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS27635 dc8b78d7c506f252c565715b696b75da 263 SUPERFAMILY SSF52833 76 254 7.6E-36 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 SUPERFAMILY SSF51556 51 346 9.53E-96 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 PIRSF PIRSF038994 1 375 3.3E-114 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 Gene3D G3DSA:3.20.20.140 65 346 3.2E-100 T 28-03-2018 CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 Gene3D G3DSA:2.30.40.10 3 64 5.2E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 TIGRFAM TIGR00221 nagA: N-acetylglucosamine-6-phosphate deacetylase 4 372 2.5E-84 T 28-03-2018 IPR003764 N-acetylglucosamine-6-phosphate deacetylase GO:0006044|GO:0008448 KEGG: 00052+3.5.1.25|KEGG: 00520+3.5.1.25|MetaCyc: PWY-6906|MetaCyc: PWY-7077|MetaCyc: PWY-7395|Reactome: R-HSA-446210 CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 SUPERFAMILY SSF51338 346 374 3.07E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 SUPERFAMILY SSF51338 2 49 3.07E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS03040 05249ab839a0e475ac6b8581a1733459 377 Pfam PF01979 Amidohydrolase family 47 364 7.1E-18 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS17415 4dc2a63280bc3e2b2deec36223bd0bb1 300 SUPERFAMILY SSF88713 4 38 4.77E-24 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CI104_RS17415 4dc2a63280bc3e2b2deec36223bd0bb1 300 SUPERFAMILY SSF88713 82 280 4.77E-24 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CI104_RS17415 4dc2a63280bc3e2b2deec36223bd0bb1 300 Gene3D G3DSA:3.20.20.370 3 268 2.0E-26 T 28-03-2018 CI104_RS17415 4dc2a63280bc3e2b2deec36223bd0bb1 300 Pfam PF01522 Polysaccharide deacetylase 15 161 2.7E-10 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CI104_RS17415 4dc2a63280bc3e2b2deec36223bd0bb1 300 Hamap MF_01870 Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD [arnD]. 1 295 62.351 T 28-03-2018 IPR023557 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD, probable GO:0016811 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 3.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 3.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 3.4E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 4.7E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 Gene3D G3DSA:1.10.10.10 1 85 5.9E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 Gene3D G3DSA:3.40.190.10 90 178 6.5E-21 T 28-03-2018 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 SUPERFAMILY SSF46785 4 89 1.76E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 SUPERFAMILY SSF53850 89 297 2.64E-40 T 28-03-2018 CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 Pfam PF03466 LysR substrate binding domain 88 295 5.8E-44 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS12670 42d5184f6ad6c2115bd16b7f50df7d85 299 Gene3D G3DSA:3.40.190.10 179 270 8.7E-22 T 28-03-2018 CI104_RS11970 681f4a3dd37401bf67fe8bb958266365 326 SUPERFAMILY SSF81345 6 323 1.15E-83 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS11970 681f4a3dd37401bf67fe8bb958266365 326 Pfam PF01032 FecCD transport family 22 323 4.0E-86 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS11970 681f4a3dd37401bf67fe8bb958266365 326 Gene3D G3DSA:1.10.3470.10 1 326 4.1E-64 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS11970 681f4a3dd37401bf67fe8bb958266365 326 Hamap MF_01004 Vitamin B12 import system permease protein BtuC [btuC]. 1 326 32.22 T 28-03-2018 IPR023691 ABC transporter, vitamin B12 import, permease protein BtuC GO:0015889|GO:0016020 CI104_RS28280 e4071b5c75c1780ec0e8627c51c6e9dc 132 SUPERFAMILY SSF140581 60 126 1.7E-29 T 28-03-2018 CI104_RS28280 e4071b5c75c1780ec0e8627c51c6e9dc 132 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 2.0E-40 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CI104_RS28280 e4071b5c75c1780ec0e8627c51c6e9dc 132 Gene3D G3DSA:1.10.10.450 3 56 2.0E-27 T 28-03-2018 CI104_RS28280 e4071b5c75c1780ec0e8627c51c6e9dc 132 Pfam PF05261 TraM protein, DNA-binding 1 126 1.3E-54 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CI104_RS28280 e4071b5c75c1780ec0e8627c51c6e9dc 132 SUPERFAMILY SSF47729 2 56 1.06E-21 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS18270 18ffefcfbd18be28aba24c4d3859305a 467 PIRSF PIRSF036410 1 467 3.9E-211 T 28-03-2018 IPR012408 Acetaldehyde/propionaldehyde dehydrogenase, EutE/PduP-related CI104_RS18270 18ffefcfbd18be28aba24c4d3859305a 467 SUPERFAMILY SSF53720 34 458 5.89E-63 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS18270 18ffefcfbd18be28aba24c4d3859305a 467 Pfam PF00171 Aldehyde dehydrogenase family 34 422 6.0E-31 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS18270 18ffefcfbd18be28aba24c4d3859305a 467 Gene3D G3DSA:3.40.309.10 253 425 5.5E-27 T 28-03-2018 CI104_RS18270 18ffefcfbd18be28aba24c4d3859305a 467 Gene3D G3DSA:3.40.605.10 8 252 3.2E-31 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS07535 6fe1013be3aa8ccf3ffac3c47c665925 155 Hamap MF_00658 Ribosomal RNA large subunit methyltransferase H [rlmH]. 1 154 27.07 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS07535 6fe1013be3aa8ccf3ffac3c47c665925 155 TIGRFAM TIGR00246 tRNA_RlmH_YbeA: rRNA large subunit m3Psi methyltransferase RlmH 1 155 2.7E-87 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS07535 6fe1013be3aa8ccf3ffac3c47c665925 155 Gene3D G3DSA:3.40.1280.10 2 154 8.1E-49 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS07535 6fe1013be3aa8ccf3ffac3c47c665925 155 Pfam PF02590 Predicted SPOUT methyltransferase 2 153 5.2E-46 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS07535 6fe1013be3aa8ccf3ffac3c47c665925 155 PIRSF PIRSF004505 1 154 1.0E-39 T 28-03-2018 IPR003742 RNA methyltransferase RlmH GO:0005737|GO:0006364|GO:0008168 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS07535 6fe1013be3aa8ccf3ffac3c47c665925 155 SUPERFAMILY SSF75217 2 153 3.3E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 469 483 7.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 522 535 7.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 PRINTS PR00344 Bacterial sensor protein C-terminal signature 498 516 7.4E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Pfam PF17203 Single cache domain 3 49 178 6.7E-20 T 28-03-2018 IPR033463 Single cache domain 3 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Pfam PF00989 PAS fold 222 323 6.1E-15 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 SMART SM00091 222 288 6.3E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 SUPERFAMILY SSF55785 222 323 3.66E-8 T 28-03-2018 IPR000014 PAS domain CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 SUPERFAMILY SSF103190 46 179 1.62E-38 T 28-03-2018 IPR029151 Periplasmic sensor domain-like CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Gene3D G3DSA:3.30.565.10 387 539 6.6E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Gene3D G3DSA:3.30.450.20 216 330 2.6E-15 T 28-03-2018 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 436 535 1.0E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 SUPERFAMILY SSF55890 339 451 2.35E-16 T 28-03-2018 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB GO:0000155|GO:0000160|GO:0016772 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 SMART SM00387 430 538 5.0E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 SUPERFAMILY SSF55874 433 535 1.51E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Gene3D G3DSA:3.30.450.20 40 181 9.0E-26 T 28-03-2018 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Gene3D G3DSA:1.10.287.130 331 386 4.9E-15 T 28-03-2018 CI104_RS22950 bae901786a9098ac8a92918f2d5cb5c2 543 Pfam PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain 332 384 2.0E-10 T 28-03-2018 CI104_RS15475 fa1baf02650aa82141094cef41b8372e 214 Gene3D G3DSA:1.10.287.500 36 168 1.7E-22 T 28-03-2018 CI104_RS15475 fa1baf02650aa82141094cef41b8372e 214 PIRSF PIRSF002884 2 214 5.5E-88 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CI104_RS15475 fa1baf02650aa82141094cef41b8372e 214 Pfam PF04344 Chemotaxis phosphatase, CheZ 17 214 4.9E-77 T 28-03-2018 IPR007439 Chemotaxis phosphatase, CheZ GO:0003824|GO:0009288|GO:0050920 CI104_RS15475 fa1baf02650aa82141094cef41b8372e 214 Gene3D G3DSA:1.20.5.590 7 34 2.8E-16 T 28-03-2018 CI104_RS15475 fa1baf02650aa82141094cef41b8372e 214 SUPERFAMILY SSF75708 11 213 4.97E-68 T 28-03-2018 CI104_RS12435 e7249a08c274df4e5e98cd6cee47224e 285 Gene3D G3DSA:1.20.1600.10 81 240 6.1E-24 T 28-03-2018 CI104_RS12435 e7249a08c274df4e5e98cd6cee47224e 285 SUPERFAMILY SSF111369 42 216 4.32E-26 T 28-03-2018 CI104_RS12435 e7249a08c274df4e5e98cd6cee47224e 285 Pfam PF13533 Biotin-lipoyl like 43 92 3.0E-16 T 28-03-2018 CI104_RS12435 e7249a08c274df4e5e98cd6cee47224e 285 Gene3D G3DSA:2.40.50.100 34 76 3.1E-6 T 28-03-2018 CI104_RS12435 e7249a08c274df4e5e98cd6cee47224e 285 Pfam PF13437 HlyD family secretion protein 154 232 4.9E-9 T 28-03-2018 CI104_RS12435 e7249a08c274df4e5e98cd6cee47224e 285 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 230 6.1E-39 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 Pfam PF00664 ABC transporter transmembrane region 27 297 2.4E-60 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 Gene3D G3DSA:1.20.1560.10 1 328 4.9E-66 T 28-03-2018 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 SMART SM00382 368 555 1.4E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 SUPERFAMILY SSF90123 8 325 7.72E-75 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 ProSitePatterns PS00211 ABC transporters family signature. 481 495 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 SUPERFAMILY SSF52540 332 580 9.61E-97 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 TIGRFAM TIGR02203 MsbA_lipidA: lipid A export permease/ATP-binding protein MsbA 12 581 7.0E-273 T 28-03-2018 IPR011917 ABC transporter, lipid A export, MsbA GO:0005524|GO:0016021|GO:0034040 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 Gene3D G3DSA:3.40.50.300 329 582 9.3E-79 T 28-03-2018 CI104_RS09060 1ed765db46929c4651b6c2588e2ad80a 582 Pfam PF00005 ABC transporter 359 509 2.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 Pfam PF01614 Bacterial transcriptional regulator 122 242 1.4E-41 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 SUPERFAMILY SSF46785 4 76 1.6E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 Gene3D G3DSA:1.10.10.10 2 77 7.5E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 SMART SM00346 4 94 3.6E-39 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 Pfam PF09339 IclR helix-turn-helix domain 6 57 1.2E-17 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 Gene3D G3DSA:3.30.450.40 78 253 7.0E-54 T 28-03-2018 IPR029016 GAF domain-like CI104_RS21655 2a43143aa0676cd33d4a4c9402ec6a13 253 SUPERFAMILY SSF55781 62 251 1.57E-53 T 28-03-2018 IPR029016 GAF domain-like CI104_RS13070 eba32bf6279ae5f68f991e90089c6109 288 Gene3D G3DSA:1.10.10.10 4 141 3.1E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13070 eba32bf6279ae5f68f991e90089c6109 288 SUPERFAMILY SSF46689 6 77 1.79E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS08435 54119b3fea267914f5b8ac2a4bb74a8d 86 Pfam PF07338 Protein of unknown function (DUF1471) 37 86 5.1E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS08435 54119b3fea267914f5b8ac2a4bb74a8d 86 Gene3D G3DSA:3.30.1660.10 22 86 3.0E-20 T 28-03-2018 IPR025543 Dodecin-like CI104_RS08435 54119b3fea267914f5b8ac2a4bb74a8d 86 SUPERFAMILY SSF159871 3 86 6.93E-23 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS17320 9299f0c11ebfd463b4f2e9afcff00f21 84 Gene3D G3DSA:3.10.20.30 1 84 3.6E-15 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS17320 9299f0c11ebfd463b4f2e9afcff00f21 84 ProSitePatterns PS00197 2Fe-2S ferredoxin-type iron-sulfur binding region signature. 37 45 - T 28-03-2018 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site GO:0051537 CI104_RS17320 9299f0c11ebfd463b4f2e9afcff00f21 84 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 10 77 1.5E-10 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS17320 9299f0c11ebfd463b4f2e9afcff00f21 84 SUPERFAMILY SSF54292 3 83 1.84E-21 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 SUPERFAMILY SSF52540 7 201 1.18E-46 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 Pfam PF07685 CobB/CobQ-like glutamine amidotransferase domain 253 444 1.8E-40 T 28-03-2018 IPR011698 CobB/CobQ-like glutamine amidotransferase GO:0003824|GO:0009236 CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 Pfam PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain 9 194 9.3E-22 T 28-03-2018 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 TIGRFAM TIGR00379 cobB: cobyrinic acid a,c-diamide synthase 9 453 1.8E-135 T 28-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 SUPERFAMILY SSF52317 254 455 6.55E-31 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 Hamap MF_00027 Cobyrinate a,c-diamide synthase [cbiA]. 5 445 42.996 T 28-03-2018 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA GO:0009236|GO:0042242 CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 Gene3D G3DSA:3.40.50.880 180 420 6.5E-23 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS16170 0f953a603e631d0b749eff48e2bf72b0 459 Gene3D G3DSA:3.40.50.300 2 179 2.4E-37 T 28-03-2018 CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 Pfam PF13378 Enolase C-terminal domain-like 133 297 5.0E-25 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 SUPERFAMILY SSF51604 116 308 1.44E-51 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 Gene3D G3DSA:3.20.20.120 117 321 5.9E-40 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 SMART SM00922 130 223 2.1E-19 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 173 204 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 2 112 3.1E-28 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 Gene3D G3DSA:3.30.390.10 1 116 2.4E-27 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS13865 ca33ec57278dfadd526bf5e95ceafa45 321 SUPERFAMILY SSF54826 2 112 4.71E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 TIGRFAM TIGR01733 AA-adenyl-dom: amino acid adenylation domain 482 887 1.1E-126 T 28-03-2018 IPR010071 Amino acid adenylation domain CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 SUPERFAMILY SSF47336 971 1042 8.51E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 SUPERFAMILY SSF56801 422 963 4.45E-146 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 SMART SM00824 Thioesterase 1070 1260 0.0039 T 28-03-2018 IPR020802 Polyketide synthase, thioesterase domain GO:0009058|GO:0016788 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 SUPERFAMILY SSF52777 190 426 4.67E-34 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Pfam PF00550 Phosphopantetheine attachment site 980 1042 6.0E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 ProSitePatterns PS00455 Putative AMP-binding domain signature. 600 611 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Pfam PF00501 AMP-binding enzyme 462 863 7.3E-96 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:1.10.1200.10 963 1053 3.6E-17 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 SUPERFAMILY SSF52777 9 183 3.0E-30 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Pfam PF00668 Condensation domain 5 442 3.0E-97 T 28-03-2018 IPR001242 Condensation domain CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:3.30.300.30 857 962 1.9E-26 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 ProSitePatterns PS00012 Phosphopantetheine attachment site. 1001 1016 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:3.30.559.10 3 205 5.1E-18 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Pfam PF00975 Thioesterase domain 1068 1288 1.9E-45 T 28-03-2018 IPR001031 Thioesterase GO:0009058|GO:0016788 Reactome: R-HSA-75105 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 SUPERFAMILY SSF53474 1050 1292 1.22E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:3.40.50.1820 1055 1293 1.7E-17 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:2.30.38.10 773 853 7.4E-22 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:3.40.50.980 606 768 2.9E-40 T 28-03-2018 CI104_RS07295 28e95e9d759f20af304e61da12064eaf 1295 Gene3D G3DSA:3.40.50.980 453 605 3.1E-43 T 28-03-2018 CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 Gene3D G3DSA:3.40.190.10 133 243 4.0E-21 T 28-03-2018 CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 Gene3D G3DSA:3.40.190.10 11 132 6.9E-38 T 28-03-2018 CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 SMART SM00079 22 243 0.0058 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 23 242 1.4E-69 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 SUPERFAMILY SSF53850 1 242 3.23E-73 T 28-03-2018 CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 241 2.8E-88 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 SMART SM00062 22 242 6.6E-85 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS08740 556efd0e6956eaf178a132e442d466cb 243 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 45 58 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS26255 89ce12e277f5a0dd88bfc4cc1fe56e2a 171 SMART SM00318 25 148 3.5E-34 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CI104_RS26255 89ce12e277f5a0dd88bfc4cc1fe56e2a 171 Pfam PF00565 Staphylococcal nuclease homologue 51 148 6.1E-24 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CI104_RS26255 89ce12e277f5a0dd88bfc4cc1fe56e2a 171 SUPERFAMILY SSF50199 23 155 7.59E-37 T 28-03-2018 IPR016071 Staphylococcal nuclease (SNase-like), OB-fold CI104_RS26255 89ce12e277f5a0dd88bfc4cc1fe56e2a 171 Gene3D G3DSA:2.40.50.90 19 153 2.2E-34 T 28-03-2018 IPR035437 Staphylococcal nuclease (SNase-like), OB-fold/extended TUDOR domain CI104_RS13000 94a538c0311a20f488bf61e41f4fd0ad 88 Gene3D G3DSA:3.30.1190.10 35 85 1.9E-12 T 28-03-2018 CI104_RS13000 94a538c0311a20f488bf61e41f4fd0ad 88 Pfam PF01381 Helix-turn-helix 18 69 5.8E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13000 94a538c0311a20f488bf61e41f4fd0ad 88 SMART SM00530 16 71 1.3E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13000 94a538c0311a20f488bf61e41f4fd0ad 88 Gene3D G3DSA:1.10.10.10 6 34 9.7E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13000 94a538c0311a20f488bf61e41f4fd0ad 88 SUPERFAMILY SSF47413 8 70 2.68E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 624 664 2.4E-11 T 28-03-2018 IPR006530 YD repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 848 883 0.001 T 28-03-2018 IPR006530 YD repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 666 706 1.6E-4 T 28-03-2018 IPR006530 YD repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 582 618 3.2E-9 T 28-03-2018 IPR006530 YD repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 TIGRFAM TIGR01643 YD_repeat_2x: YD repeat (two copies) 1057 1093 9.9E-7 T 28-03-2018 IPR006530 YD repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Gene3D G3DSA:2.130.10.10 227 1174 0.0018 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF05488 PAAR motif 72 138 4.4E-13 T 28-03-2018 IPR008727 PAAR motif CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF03527 RHS protein 1145 1177 3.4E-7 T 28-03-2018 IPR001826 RHS protein CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 SUPERFAMILY SSF69304 577 756 8.76E-5 T 28-03-2018 CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 TIGRFAM TIGR03696 Rhs_assc_core: RHS repeat-associated core domain 1184 1251 1.4E-25 T 28-03-2018 IPR022385 Rhs repeat-associated core GO:0097264 CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF14414 A nuclease of the HNH/ENDO VII superfamily with conserved WHH 1305 1351 2.2E-16 T 28-03-2018 IPR032869 WHH domain-containing protein CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF05593 RHS Repeat 625 661 2.2E-10 T 28-03-2018 IPR031325 RHS repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF05593 RHS Repeat 1057 1090 3.8E-5 T 28-03-2018 IPR031325 RHS repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF05593 RHS Repeat 582 617 7.6E-10 T 28-03-2018 IPR031325 RHS repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 Pfam PF05593 RHS Repeat 848 883 4.1E-5 T 28-03-2018 IPR031325 RHS repeat CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 PRINTS PR00394 RHS protein signature 1196 1216 3.8E-13 T 28-03-2018 IPR001826 RHS protein CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 PRINTS PR00394 RHS protein signature 1219 1238 3.8E-13 T 28-03-2018 IPR001826 RHS protein CI104_RS05685 ff56312fe43c30d2fc8c937849a9be31 1369 PRINTS PR00394 RHS protein signature 1139 1159 3.8E-13 T 28-03-2018 IPR001826 RHS protein CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 PIRSF PIRSF000077 2 108 1.3E-44 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 SUPERFAMILY SSF52833 2 108 1.88E-41 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 Pfam PF00085 Thioredoxin 5 106 1.9E-34 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 TIGRFAM TIGR01068 thioredoxin: thioredoxin 9 107 3.8E-39 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 Gene3D G3DSA:3.40.30.10 1 109 1.1E-35 T 28-03-2018 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 PRINTS PR00421 Thioredoxin family signature 24 32 3.8E-10 T 28-03-2018 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 PRINTS PR00421 Thioredoxin family signature 72 83 3.8E-10 T 28-03-2018 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 PRINTS PR00421 Thioredoxin family signature 32 41 3.8E-10 T 28-03-2018 CI104_RS24940 a0d929e2cbca5cc9f30c9fe9df2f4b1b 109 ProSitePatterns PS00194 Thioredoxin family active site. 25 43 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS16800 5516f07698d509c10cd2245c3903e5f1 312 Pfam PF01207 Dihydrouridine synthase (Dus) 5 306 5.8E-93 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS16800 5516f07698d509c10cd2245c3903e5f1 312 Gene3D G3DSA:3.20.20.70 1 242 5.7E-48 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS16800 5516f07698d509c10cd2245c3903e5f1 312 Hamap MF_02043 tRNA-dihydrouridine(16) synthase [dusC]. 8 310 52.197 T 28-03-2018 IPR032886 tRNA-dihydrouridine(16) synthase GO:0002943|GO:0017150 CI104_RS16800 5516f07698d509c10cd2245c3903e5f1 312 PIRSF PIRSF006621 1 311 6.1E-83 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS16800 5516f07698d509c10cd2245c3903e5f1 312 SUPERFAMILY SSF51395 1 305 2.2E-72 T 28-03-2018 CI104_RS16800 5516f07698d509c10cd2245c3903e5f1 312 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 92 110 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS26665 3eb7f8c9595c877e3ecc0f5c335544e1 441 Pfam PF07804 HipA-like C-terminal domain 155 404 1.6E-51 T 28-03-2018 IPR012893 HipA-like, C-terminal CI104_RS26665 3eb7f8c9595c877e3ecc0f5c335544e1 441 Pfam PF13657 HipA N-terminal domain 8 108 8.1E-19 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CI104_RS26665 3eb7f8c9595c877e3ecc0f5c335544e1 441 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 8 108 4.5E-27 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CI104_RS28670 0da60b71ac1717b844ad769f179e251a 41 Gene3D G3DSA:3.30.70.100 2 41 4.4E-6 T 28-03-2018 CI104_RS28670 0da60b71ac1717b844ad769f179e251a 41 PRINTS PR00946 Mercury scavenger protein signature 12 26 8.8E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS28670 0da60b71ac1717b844ad769f179e251a 41 PRINTS PR00946 Mercury scavenger protein signature 26 40 8.8E-14 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS28670 0da60b71ac1717b844ad769f179e251a 41 SUPERFAMILY SSF55008 3 39 1.57E-5 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS14665 6f547308889360abefe9bfe8e3a899d7 97 SUPERFAMILY SSF160191 1 93 1.01E-39 T 28-03-2018 CI104_RS14665 6f547308889360abefe9bfe8e3a899d7 97 ProDom PD030374 YCGL UNCHARACTERIZED SIMILAR BACTERIA HI1446 Y2231 HYDROLASE CYTOPLASMIC YPO2080 SO2575 1 82 1.0E-39 T 28-03-2018 IPR027354 YcgL domain CI104_RS14665 6f547308889360abefe9bfe8e3a899d7 97 Hamap MF_01866 Protein YcgL [ycgL]. 1 88 26.813 T 28-03-2018 IPR027354 YcgL domain CI104_RS14665 6f547308889360abefe9bfe8e3a899d7 97 Pfam PF05166 YcgL domain 3 75 1.0E-31 T 28-03-2018 IPR027354 YcgL domain CI104_RS21985 219cf9217925131eea6941625143649d 503 PRINTS PR00481 Cytosol aminopeptidase signature 287 308 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 PRINTS PR00481 Cytosol aminopeptidase signature 374 389 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 PRINTS PR00481 Cytosol aminopeptidase signature 324 345 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 PRINTS PR00481 Cytosol aminopeptidase signature 346 366 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 PRINTS PR00481 Cytosol aminopeptidase signature 265 282 6.0E-54 T 28-03-2018 IPR011356 Peptidase M17, leucine aminopeptidase/peptidase B GO:0004177|GO:0005737|GO:0008235|GO:0019538|GO:0030145 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 ProSitePatterns PS00631 Cytosol aminopeptidase signature. 350 357 - T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 SUPERFAMILY SSF53187 180 496 1.54E-124 T 28-03-2018 CI104_RS21985 219cf9217925131eea6941625143649d 503 Gene3D G3DSA:3.40.220.10 1 157 8.9E-31 T 28-03-2018 CI104_RS21985 219cf9217925131eea6941625143649d 503 SUPERFAMILY SSF52949 1 184 7.65E-52 T 28-03-2018 CI104_RS21985 219cf9217925131eea6941625143649d 503 Gene3D G3DSA:3.40.630.10 170 499 4.8E-134 T 28-03-2018 CI104_RS21985 219cf9217925131eea6941625143649d 503 Pfam PF02789 Cytosol aminopeptidase family, N-terminal domain 19 147 1.1E-33 T 28-03-2018 IPR008283 Peptidase M17, leucyl aminopeptidase, N-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 Pfam PF00883 Cytosol aminopeptidase family, catalytic domain 186 489 2.8E-123 T 28-03-2018 IPR000819 Peptidase M17, leucyl aminopeptidase, C-terminal GO:0004177|GO:0005622|GO:0006508 KEGG: 00480+3.4.11.1 CI104_RS21985 219cf9217925131eea6941625143649d 503 Hamap MF_00181 Probable cytosol aminopeptidase [pepA]. 3 498 41.407 T 28-03-2018 IPR023042 Peptidase M17, leucine aminopeptidase KEGG: 00480+3.4.11.1 CI104_RS11015 a7fa2a70d775349bf2dc64d744f177a5 380 Gene3D G3DSA:3.30.160.60 1 62 4.9E-19 T 28-03-2018 CI104_RS11015 a7fa2a70d775349bf2dc64d744f177a5 380 Gene3D G3DSA:1.10.150.130 79 194 2.4E-12 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS11015 a7fa2a70d775349bf2dc64d744f177a5 380 Pfam PF09003 Bacteriophage lambda integrase, Arm DNA-binding domain 1 72 3.4E-32 T 28-03-2018 IPR015094 Integrase, lambda-type, N-terminal DNA-binding GO:0003677|GO:0008907|GO:0015074 CI104_RS11015 a7fa2a70d775349bf2dc64d744f177a5 380 SUPERFAMILY SSF56349 84 368 4.41E-51 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS11015 a7fa2a70d775349bf2dc64d744f177a5 380 Pfam PF00589 Phage integrase family 195 366 2.7E-19 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS11015 a7fa2a70d775349bf2dc64d744f177a5 380 Gene3D G3DSA:1.10.443.10 195 373 6.5E-23 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS05340 9fc11e3dc55c43eec943ebb5d67f4e7c 161 PIRSF PIRSF002094 1 161 1.8E-50 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CI104_RS05340 9fc11e3dc55c43eec943ebb5d67f4e7c 161 Gene3D G3DSA:3.30.910.20 83 161 7.0E-13 T 28-03-2018 CI104_RS05340 9fc11e3dc55c43eec943ebb5d67f4e7c 161 Gene3D G3DSA:3.30.910.20 10 82 2.6E-9 T 28-03-2018 CI104_RS05340 9fc11e3dc55c43eec943ebb5d67f4e7c 161 SUPERFAMILY SSF111384 20 160 8.24E-32 T 28-03-2018 IPR024930 Skp domain CI104_RS05340 9fc11e3dc55c43eec943ebb5d67f4e7c 161 SMART SM00935 10 161 1.2E-39 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CI104_RS05340 9fc11e3dc55c43eec943ebb5d67f4e7c 161 Pfam PF03938 Outer membrane protein (OmpH-like) 8 159 3.3E-29 T 28-03-2018 IPR005632 Chaperone protein Skp GO:0051082 CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 Gene3D G3DSA:3.90.1150.10 284 401 2.9E-40 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 ProSitePatterns PS00595 Aminotransferases class-V pyridoxal-phosphate attachment site. 217 236 - T 28-03-2018 IPR020578 Aminotransferase class-V, pyridoxal-phosphate binding site CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 SUPERFAMILY SSF53383 4 402 7.15E-126 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 TIGRFAM TIGR01979 sufS: cysteine desulfurase, SufS family 7 405 9.8E-185 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 Pfam PF00266 Aminotransferase class-V 26 394 1.5E-154 T 28-03-2018 IPR000192 Aminotransferase class V domain CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 Gene3D G3DSA:3.40.640.10 34 283 7.3E-58 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS12150 55d4090d029c44f6c0b06732f3506c0b 406 Hamap MF_01831 Cysteine desulfurase [sufS]. 1 406 74.892 T 28-03-2018 IPR010970 Cysteine desulfurase, SufS GO:0006534|GO:0030170|GO:0031071 KEGG: 00730+2.8.1.7|MetaCyc: PWY-6823|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7250 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 SUPERFAMILY SSF118116 439 618 3.14E-43 T 28-03-2018 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 SMART SM01340 212 331 6.3E-54 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 ProSitePatterns PS00058 DNA mismatch repair proteins mutL / hexB / PMS1 signature. 93 99 - T 28-03-2018 IPR014762 DNA mismatch repair, conserved site CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 TIGRFAM TIGR00585 mutl: DNA mismatch repair protein MutL 1 311 1.3E-106 T 28-03-2018 IPR002099 DNA mismatch repair protein family GO:0005524|GO:0006298|GO:0030983 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 Gene3D G3DSA:3.30.565.10 1 216 3.8E-35 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 SMART SM00853 443 578 1.7E-15 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 SUPERFAMILY SSF54211 191 331 4.17E-35 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 Gene3D G3DSA:3.30.230.10 217 330 2.8E-29 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 Pfam PF01119 DNA mismatch repair protein, C-terminal domain 214 330 2.7E-35 T 28-03-2018 IPR013507 DNA mismatch repair protein, C-terminal GO:0005524|GO:0006298|GO:0030983 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 SUPERFAMILY SSF55874 1 200 3.27E-57 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 Pfam PF08676 MutL C terminal dimerisation domain 440 567 6.7E-24 T 28-03-2018 IPR014790 MutL, C-terminal, dimerisation GO:0005524|GO:0006298 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 24 122 3.6E-13 T 28-03-2018 CI104_RS22545 9dd0214aebbec112081ce5af3db3750c 620 Hamap MF_00149 DNA mismatch repair protein MutL [mutL]. 1 617 25.691 T 28-03-2018 IPR020667 DNA mismatch repair protein, MutL GO:0006298 CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 SUPERFAMILY SSF46548 6 82 1.26E-16 T 28-03-2018 IPR009051 Alpha-helical ferredoxin GO:0051536 CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 Pfam PF02754 Cysteine-rich domain 163 249 3.7E-15 T 28-03-2018 IPR004017 Cysteine-rich domain CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 Pfam PF02754 Cysteine-rich domain 293 376 2.1E-14 T 28-03-2018 IPR004017 Cysteine-rich domain CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 56 67 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 Pfam PF13183 4Fe-4S dicluster domain 6 70 6.3E-10 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 Gene3D G3DSA:3.30.70.20 65 387 2.6E-4 T 28-03-2018 CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 Gene3D G3DSA:3.30.70.20 4 64 9.0E-9 T 28-03-2018 CI104_RS17350 babe47e01f13b4990c279a01539bf695 396 TIGRFAM TIGR03379 glycerol3P_GlpC: glycerol-3-phosphate dehydrogenase, anaerobic, C subunit 3 395 9.3E-228 T 28-03-2018 IPR017753 Glycerol-3-phosphate dehydrogenase, GlpC subunit GO:0006810|GO:0016020 CI104_RS28500 339781ad2e6d07c8dd9cee829f2752e8 83 Pfam PF10723 Replication regulatory protein RepB 1 79 1.0E-31 T 28-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 CI104_RS26420 daaf1611ab12238837571a3dae778b89 62 Gene3D G3DSA:2.10.260.10 1 60 0.0011 T 28-03-2018 CI104_RS26420 daaf1611ab12238837571a3dae778b89 62 SUPERFAMILY SSF89447 1 53 1.88E-5 T 28-03-2018 CI104_RS21530 e11504e0165fb4559eea3288eb4ad65b 413 Gene3D G3DSA:1.20.1250.20 208 409 3.7E-12 T 28-03-2018 CI104_RS21530 e11504e0165fb4559eea3288eb4ad65b 413 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS21530 e11504e0165fb4559eea3288eb4ad65b 413 Gene3D G3DSA:1.20.1250.20 4 200 2.1E-27 T 28-03-2018 CI104_RS21530 e11504e0165fb4559eea3288eb4ad65b 413 Pfam PF07690 Major Facilitator Superfamily 26 360 2.4E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS21530 e11504e0165fb4559eea3288eb4ad65b 413 SUPERFAMILY SSF103473 17 396 1.57E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS25460 50f47745b2a7e6cad7cc80bc7b916536 352 Pfam PF07728 AAA domain (dynein-related subfamily) 98 238 5.6E-32 T 28-03-2018 IPR011704 ATPase, dynein-related, AAA domain GO:0005524|GO:0016887 CI104_RS25460 50f47745b2a7e6cad7cc80bc7b916536 352 SUPERFAMILY SSF52540 67 302 2.62E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25460 50f47745b2a7e6cad7cc80bc7b916536 352 Gene3D G3DSA:3.40.50.300 62 281 1.1E-18 T 28-03-2018 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 Pfam PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family 169 394 2.3E-83 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 SUPERFAMILY SSF51690 120 392 5.69E-87 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 SUPERFAMILY SSF54675 2 138 3.83E-44 T 28-03-2018 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 TIGRFAM TIGR01514 NAPRTase: nicotinate phosphoribosyltransferase 8 394 1.7E-179 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 Gene3D G3DSA:3.20.140.10 1 400 5.2E-105 T 28-03-2018 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 Hamap MF_00570 Nicotinate phosphoribosyltransferase [pncB]. 5 395 50.469 T 28-03-2018 IPR006406 Nicotinate phosphoribosyltransferase GO:0004516|GO:0019357 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CI104_RS09155 fc3497f7a2ca4589d60ab67d35e39ddb 400 PIRSF PIRSF000484 1 397 3.6E-61 T 28-03-2018 IPR007229 Nicotinate phosphoribosyltransferase family KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381|Reactome: R-HSA-197264 CI104_RS07425 95f388144a16ea030e0e26b2f7b03a0f 302 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 7 302 182.751 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CI104_RS07425 95f388144a16ea030e0e26b2f7b03a0f 302 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 24 291 9.2E-84 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CI104_RS07425 95f388144a16ea030e0e26b2f7b03a0f 302 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 22 292 5.9E-110 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CI104_RS02470 27fdc19fbb4d954763d6fae4d7370785 342 Pfam PF04085 rod shape-determining protein MreC 123 269 4.5E-36 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CI104_RS02470 27fdc19fbb4d954763d6fae4d7370785 342 TIGRFAM TIGR00219 mreC: rod shape-determining protein MreC 1 283 2.2E-125 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CI104_RS02470 27fdc19fbb4d954763d6fae4d7370785 342 PIRSF PIRSF038471 2 284 3.3E-74 T 28-03-2018 IPR007221 Rod shape-determining protein MreC GO:0008360 CI104_RS24200 7728e43a5d55c80c938f78a601934024 251 TIGRFAM TIGR00672 cdh: CDP-diacylglycerol diphosphatase 1 248 9.6E-144 T 28-03-2018 IPR015993 CDP-diacylglycerol pyrophosphatase, proteobacterial GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CI104_RS24200 7728e43a5d55c80c938f78a601934024 251 SUPERFAMILY SSF54197 29 247 3.51E-89 T 28-03-2018 IPR011146 HIT-like domain GO:0003824 CI104_RS24200 7728e43a5d55c80c938f78a601934024 251 PIRSF PIRSF001273 1 251 7.0E-102 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CI104_RS24200 7728e43a5d55c80c938f78a601934024 251 Gene3D G3DSA:3.30.428.30 27 247 2.7E-90 T 28-03-2018 CI104_RS24200 7728e43a5d55c80c938f78a601934024 251 Pfam PF02611 CDP-diacylglycerol pyrophosphatase 29 247 5.1E-91 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CI104_RS24200 7728e43a5d55c80c938f78a601934024 251 Hamap MF_00319 CDP-diacylglycerol pyrophosphatase [cdh]. 1 249 50.628 T 28-03-2018 IPR003763 CDP-diacylglycerol pyrophosphatase GO:0008654|GO:0008715|GO:0016020 KEGG: 00564+3.6.1.26 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 ProSitePatterns PS00636 Nt-dnaJ domain signature. 47 66 - T 28-03-2018 IPR018253 DnaJ domain, conserved site CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Gene3D G3DSA:2.60.260.20 253 363 5.6E-27 T 28-03-2018 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 SUPERFAMILY SSF57938 132 209 5.62E-24 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Gene3D G3DSA:2.60.260.20 192 252 6.6E-19 T 28-03-2018 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Pfam PF01556 DnaJ C terminal domain 119 331 1.8E-46 T 28-03-2018 IPR002939 Chaperone DnaJ, C-terminal CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Pfam PF00226 DnaJ domain 5 67 1.3E-28 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Gene3D G3DSA:2.10.230.10 145 191 8.4E-15 T 28-03-2018 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 PRINTS PR00625 DnaJ domain signature 25 40 8.0E-34 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 PRINTS PR00625 DnaJ domain signature 7 25 8.0E-34 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 PRINTS PR00625 DnaJ domain signature 42 62 8.0E-34 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 PRINTS PR00625 DnaJ domain signature 62 81 8.0E-34 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Gene3D G3DSA:1.10.287.110 1 116 5.3E-38 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 SUPERFAMILY SSF49493 112 167 9.03E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 SUPERFAMILY SSF49493 211 260 9.03E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Pfam PF00684 DnaJ central domain 145 205 8.8E-16 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 Hamap MF_01152 Chaperone protein DnaJ [dnaJ]. 2 371 42.954 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 SUPERFAMILY SSF49493 257 342 5.23E-21 T 28-03-2018 IPR008971 HSP40/DnaJ peptide-binding GO:0006457|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 TIGRFAM TIGR02349 DnaJ_bact: chaperone protein DnaJ 5 347 5.2E-144 T 28-03-2018 IPR012724 Chaperone DnaJ GO:0005524|GO:0006457|GO:0009408|GO:0051082 CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 SMART SM00271 4 62 1.7E-31 T 28-03-2018 IPR001623 DnaJ domain CI104_RS04515 143af63f805b414f692b06f0c3e88538 377 SUPERFAMILY SSF46565 1 107 9.55E-37 T 28-03-2018 IPR001623 DnaJ domain CI104_RS21165 f48dc90744ef916095ec8b9ad952cd67 239 Gene3D G3DSA:3.40.50.1580 9 235 7.0E-57 T 28-03-2018 CI104_RS21165 f48dc90744ef916095ec8b9ad952cd67 239 TIGRFAM TIGR00107 deoD: purine nucleoside phosphorylase 5 234 6.8E-126 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CI104_RS21165 f48dc90744ef916095ec8b9ad952cd67 239 SUPERFAMILY SSF53167 3 234 3.67E-93 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS21165 f48dc90744ef916095ec8b9ad952cd67 239 Pfam PF01048 Phosphorylase superfamily 15 218 1.5E-39 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS21165 f48dc90744ef916095ec8b9ad952cd67 239 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 62 77 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21165 f48dc90744ef916095ec8b9ad952cd67 239 Hamap MF_01627 Purine nucleoside phosphorylase DeoD-type [deoD]. 2 235 52.067 T 28-03-2018 IPR004402 Purine nucleoside phosphorylase DeoD-type GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 Gene3D G3DSA:3.40.50.1000 86 225 2.2E-34 T 28-03-2018 IPR023214 HAD-like domain CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 SUPERFAMILY SSF56784 3 222 7.83E-48 T 28-03-2018 IPR023214 HAD-like domain CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 TIGRFAM TIGR01549 HAD-SF-IA-v1: HAD hydrolase, family IA, variant 1 99 189 4.2E-17 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 195 2.1E-10 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 78 194 7.8E-21 T 28-03-2018 IPR023214 HAD-like domain CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 Gene3D G3DSA:1.10.150.240 15 85 1.6E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS21220 326bf0817eabe2386daa27390e7453f4 225 TIGRFAM TIGR02254 YjjG/YfnB: noncanonical pyrimidine nucleotidase, YjjG family 4 221 3.2E-73 T 28-03-2018 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB GO:0016787 CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 Gene3D G3DSA:3.30.1700.10 129 299 5.7E-70 T 28-03-2018 IPR011334 UDP-3-O-acyl N-acetylglucosamine deacetylase, C-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 SUPERFAMILY SSF54211 3 124 6.22E-42 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 SUPERFAMILY SSF54211 134 278 2.73E-54 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 Hamap MF_00388 UDP-3-O-acyl-N-acetylglucosamine deacetylase [lpxC]. 2 280 46.266 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 Pfam PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase 4 276 2.4E-109 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 Gene3D G3DSA:3.30.230.20 1 128 5.7E-49 T 28-03-2018 IPR015870 UDP-3-O-acyl N-acetylglucosamine deacetylase, N-terminal GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS04930 c07c0f6686bb82f9cb49229b2a1b3974 305 TIGRFAM TIGR00325 lpxC: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 2 301 7.2E-163 T 28-03-2018 IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase GO:0008759|GO:0009245 KEGG: 00540+3.5.1.108|KEGG: 00630+3.5.1.10|KEGG: 00670+3.5.1.10|MetaCyc: PWY-2201|MetaCyc: PWY-5497 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 Gene3D G3DSA:3.30.1360.60 5 78 1.8E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 Pfam PF00367 phosphotransferase system, EIIB 12 39 1.7E-11 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 Pfam PF02378 Phosphotransferase system, EIIC 112 404 1.8E-32 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 SUPERFAMILY SSF55604 10 81 1.96E-18 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 TIGRFAM TIGR01992 PTS-IIBC-Tre: PTS system, trehalose-specific IIBC component 7 460 1.5E-219 T 28-03-2018 IPR011296 Phosphotransferase system, trehalose-specific IIBC component GO:0015574|GO:0015771|GO:0016021 KEGG: 00230+2.7.1.20|KEGG: 00500+2.7.1.201|MetaCyc: PWY-6619 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 TIGRFAM TIGR00826 EIIB_glc: PTS system, glucose-like IIB component 30 111 2.6E-17 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS22125 bf54f603ac94cea7cb97bc32b96bb205 472 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS01840 b9a87e54611293756c554f6419539c52 340 Pfam PF01380 SIS domain 44 160 1.9E-7 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS01840 b9a87e54611293756c554f6419539c52 340 SUPERFAMILY SSF53697 17 338 1.48E-54 T 28-03-2018 CI104_RS01840 b9a87e54611293756c554f6419539c52 340 Gene3D G3DSA:3.40.50.10490 195 333 1.2E-16 T 28-03-2018 CI104_RS01840 b9a87e54611293756c554f6419539c52 340 Gene3D G3DSA:3.40.50.10490 15 169 1.3E-20 T 28-03-2018 CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 SUPERFAMILY SSF51735 3 242 8.38E-71 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 3 188 0.0049 T 28-03-2018 CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 Gene3D G3DSA:3.40.50.720 2 243 3.1E-61 T 28-03-2018 CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 9 242 1.0E-55 T 28-03-2018 CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 TIGRFAM TIGR01831 fabG_rel: putative 3-oxoacyl-(acyl-carrier-protein) reductase 5 243 4.8E-137 T 28-03-2018 IPR011285 3-oxoacyl-(acyl-carrier-protein) reductase, putative KEGG: 00040+1.1.1.10|KEGG: 00061+1.1.1.100|KEGG: 00780+1.1.1.100|MetaCyc: PWY-5367|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 127 143 6.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 6.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 206 226 6.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 153 172 6.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 174 191 6.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 79 90 6.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 133 141 1.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 79 90 1.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS01265 c0b38c7e5d028455daea2e9484ae9dfd 243 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 153 172 1.8E-8 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS05265 8c6e105748f7326dbee6e2c65583f5dc 128 Hamap MF_01519 UPF0325 protein YaeH [yaeH]. 1 126 32.78 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 CI104_RS05265 8c6e105748f7326dbee6e2c65583f5dc 128 ProDom PD080106 UPF0325 YAEH STRUCTURAL ECA1027 VV11856 YPTB3007 PBPRA2971 VV2560 VF1965 VC2264 1 125 5.0E-66 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 CI104_RS05265 8c6e105748f7326dbee6e2c65583f5dc 128 Pfam PF11944 Protein of unknown function (DUF3461) 1 125 2.0E-55 T 28-03-2018 IPR020911 Uncharacterised protein family UPF0325 CI104_RS23415 dc7491665e6c0b17e127dd3d782c2e32 441 Hamap MF_01301 Maltoporin [lamB]. 4 441 43.251 T 28-03-2018 IPR023738 Maltoporin GO:0009279|GO:0015481|GO:0015768|GO:0042956|GO:0042958 CI104_RS23415 dc7491665e6c0b17e127dd3d782c2e32 441 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 32 437 0.0 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS23415 dc7491665e6c0b17e127dd3d782c2e32 441 Gene3D G3DSA:2.40.170.10 26 441 5.5E-162 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS23415 dc7491665e6c0b17e127dd3d782c2e32 441 SUPERFAMILY SSF56935 26 441 7.32E-149 T 28-03-2018 CI104_RS23415 dc7491665e6c0b17e127dd3d782c2e32 441 Pfam PF02264 LamB porin 28 441 2.1E-147 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS13135 e9a5cb4d659088e43c2bab2114c1f9fb 218 Gene3D G3DSA:1.20.950.20 1 217 3.6E-56 T 28-03-2018 CI104_RS13135 e9a5cb4d659088e43c2bab2114c1f9fb 218 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 206 3.2E-68 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CI104_RS13135 e9a5cb4d659088e43c2bab2114c1f9fb 218 SUPERFAMILY SSF81342 3 212 2.35E-54 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS13135 e9a5cb4d659088e43c2bab2114c1f9fb 218 Pfam PF01292 Prokaryotic cytochrome b561 13 186 2.6E-19 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CI104_RS18510 c6d5e63726ee92ce0e1012f2cc27013b 454 TIGRFAM TIGR00237 xseA: exodeoxyribonuclease VII, large subunit 11 359 2.2E-139 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS18510 c6d5e63726ee92ce0e1012f2cc27013b 454 Hamap MF_00378 Exodeoxyribonuclease 7 large subunit [xseA]. 7 443 30.37 T 28-03-2018 IPR003753 Exonuclease VII, large subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS18510 c6d5e63726ee92ce0e1012f2cc27013b 454 Gene3D G3DSA:3.90.226.10 110 412 0.0066 T 28-03-2018 CI104_RS18510 c6d5e63726ee92ce0e1012f2cc27013b 454 Pfam PF02601 Exonuclease VII, large subunit 126 440 4.3E-102 T 28-03-2018 IPR020579 Exonuclease VII, large subunit, C-terminal GO:0008855 CI104_RS18510 c6d5e63726ee92ce0e1012f2cc27013b 454 Pfam PF13742 OB-fold nucleic acid binding domain 10 103 1.2E-32 T 28-03-2018 IPR025824 OB-fold nucleic acid binding domain GO:0003676 CI104_RS18510 c6d5e63726ee92ce0e1012f2cc27013b 454 Gene3D G3DSA:2.40.50.140 6 105 1.2E-10 T 28-03-2018 CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 SMART SM00671 1 27 200.0 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 SMART SM00671 28 63 2.4E-9 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 SMART SM00671 64 99 92.0 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 SMART SM00671 100 135 0.0027 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 SMART SM00671 136 171 1.7 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 SUPERFAMILY SSF81901 5 174 1.05E-31 T 28-03-2018 CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Gene3D G3DSA:2.60.40.1180 1 43 1.9E-15 T 28-03-2018 CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Gene3D G3DSA:2.60.40.1180 44 91 8.8E-14 T 28-03-2018 CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Gene3D G3DSA:2.60.40.1180 92 154 2.3E-11 T 28-03-2018 CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Pfam PF08238 Sel1 repeat 64 79 2.4 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Pfam PF08238 Sel1 repeat 28 63 1.8E-9 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Pfam PF08238 Sel1 repeat 138 171 4.3 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Pfam PF08238 Sel1 repeat 8 27 0.38 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS27660 9b87f54dca93e536e564db374bb8dd0a 180 Pfam PF08238 Sel1 repeat 102 131 0.0035 T 28-03-2018 IPR006597 Sel1-like repeat CI104_RS12415 f65db825cdb9cc24b10456610ac358eb 79 Pfam PF06945 Protein of unknown function (DUF1289) 12 57 1.1E-18 T 28-03-2018 IPR010710 Protein of unknown function DUF1289 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 SMART SM00319 51 190 3.7E-29 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 Pfam PF00672 HAMP domain 228 277 1.9E-9 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 Pfam PF02203 Tar ligand binding domain homologue 15 189 6.6E-35 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 19 44 3.5E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 379 406 3.5E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 408 437 3.5E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 302 331 3.5E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 456 485 3.5E-61 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 Gene3D G3DSA:1.20.120.30 38 195 4.5E-27 T 28-03-2018 IPR035440 Methyl-accepting chemotaxis protein, four helix bundle domain CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 SMART SM00283 281 528 3.0E-87 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 Gene3D G3DSA:1.10.287.950 333 532 6.4E-48 T 28-03-2018 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 339 496 1.4E-55 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 Gene3D G3DSA:1.10.287.950 196 332 3.8E-13 T 28-03-2018 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 SMART SM00304 228 280 1.8E-10 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 SUPERFAMILY SSF47170 31 179 4.19E-26 T 28-03-2018 IPR003122 Chemotaxis methyl-accepting receptor Tar-related, ligand-binding GO:0006935|GO:0007165 CI104_RS13570 ff48a3d0df858757dd3b0b587f94f681 562 SUPERFAMILY SSF58104 248 533 1.83E-73 T 28-03-2018 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 TIGRFAM TIGR02091 glgC: glucose-1-phosphate adenylyltransferase 21 397 2.2E-156 T 28-03-2018 IPR011831 Glucose-1-phosphate adenylyltransferase GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 ProSitePatterns PS00808 ADP-glucose pyrophosphorylase signature 1. 26 45 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 Hamap MF_00624 Glucose-1-phosphate adenylyltransferase [glgC]. 17 423 52.534 T 28-03-2018 IPR023049 Glucose-1-phosphate adenylyltransferase GlgC, bacterial GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 SUPERFAMILY SSF51161 312 411 1.0E-18 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 SUPERFAMILY SSF53448 378 393 1.22E-77 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 SUPERFAMILY SSF53448 20 294 1.22E-77 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 Gene3D G3DSA:3.90.550.10 20 333 9.1E-66 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 Gene3D G3DSA:2.160.10.10 334 419 5.1E-7 T 28-03-2018 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 ProSitePatterns PS00810 ADP-glucose pyrophosphorylase signature 3. 211 221 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 Pfam PF00483 Nucleotidyl transferase 22 291 1.6E-69 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CI104_RS01555 56f48d0d2f004a7632bbd090cba78343 430 ProSitePatterns PS00809 ADP-glucose pyrophosphorylase signature 2. 113 121 - T 28-03-2018 IPR005836 ADP-glucose pyrophosphorylase, conserved site GO:0005978|GO:0008878 KEGG: 00500+2.7.7.27|KEGG: 00520+2.7.7.27|MetaCyc: PWY-622 CI104_RS16580 93b41cfe9855273e42f12ea2a704966a 193 SUPERFAMILY SSF51283 1 193 1.18E-58 T 28-03-2018 IPR029054 dUTPase-like CI104_RS16580 93b41cfe9855273e42f12ea2a704966a 193 Gene3D G3DSA:2.70.40.10 2 167 2.4E-42 T 28-03-2018 CI104_RS16580 93b41cfe9855273e42f12ea2a704966a 193 TIGRFAM TIGR02274 dCTP_deam: deoxycytidine triphosphate deaminase 2 190 5.8E-66 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CI104_RS16580 93b41cfe9855273e42f12ea2a704966a 193 Pfam PF00692 dUTPase 79 185 1.2E-8 T 28-03-2018 IPR029054 dUTPase-like CI104_RS16580 93b41cfe9855273e42f12ea2a704966a 193 Hamap MF_00146 dCTP deaminase [dcd]. 1 190 33.475 T 28-03-2018 IPR011962 dCTP deaminase GO:0006229|GO:0008829 KEGG: 00240+3.5.4.13|MetaCyc: PWY-7187 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 TIGRFAM TIGR02199 rfaE_dom_II: bifunctional protein RfaE, domain II 332 473 1.5E-64 T 28-03-2018 IPR011914 RfaE bifunctional protein, domain II GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 Gene3D G3DSA:3.40.50.620 319 477 2.1E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 Pfam PF01467 Cytidylyltransferase-like 345 468 7.4E-15 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 342 408 5.4E-18 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 51 74 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 TIGRFAM TIGR02198 rfaE_dom_I: bifunctional protein RfaE, domain I 5 312 2.4E-129 T 28-03-2018 IPR011913 RfaE bifunctional protein, domain I GO:0005975|GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 SUPERFAMILY SSF52374 340 471 1.04E-21 T 28-03-2018 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 SUPERFAMILY SSF53613 12 309 2.65E-60 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 Gene3D G3DSA:3.40.1190.20 2 310 3.3E-60 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 Hamap MF_01603 Bifunctional protein HldE [hldE]. 4 474 43.686 T 28-03-2018 IPR023030 Bifunctional protein HldE GO:0016773|GO:0016779 KEGG: 00040+2.7.1.16|KEGG: 00540+2.7.7.70+2.7.1.167 CI104_RS03780 788cb67cf554a3a467123783e40c298b 477 Pfam PF00294 pfkB family carbohydrate kinase 13 305 1.8E-58 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS07680 853f97dfd74ee861b8561d18667aca79 250 Gene3D G3DSA:3.40.50.1000 1 249 2.3E-28 T 28-03-2018 IPR023214 HAD-like domain CI104_RS07680 853f97dfd74ee861b8561d18667aca79 250 Pfam PF13242 HAD-hyrolase-like 174 246 1.1E-19 T 28-03-2018 CI104_RS07680 853f97dfd74ee861b8561d18667aca79 250 TIGRFAM TIGR01460 HAD-SF-IIA: HAD hydrolase, family IIA 6 223 1.3E-64 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CI104_RS07680 853f97dfd74ee861b8561d18667aca79 250 Pfam PF13344 Haloacid dehalogenase-like hydrolase 6 105 4.6E-22 T 28-03-2018 IPR006357 HAD-superfamily hydrolase, subfamily IIA CI104_RS07680 853f97dfd74ee861b8561d18667aca79 250 SUPERFAMILY SSF56784 1 247 2.58E-64 T 28-03-2018 IPR023214 HAD-like domain CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 Hamap MF_00135 N-(5'-phosphoribosyl)anthranilate isomerase [trpF]. 255 452 31.248 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 Gene3D G3DSA:3.20.20.70 259 452 6.1E-58 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 Pfam PF00218 Indole-3-glycerol phosphate synthase 5 251 3.8E-99 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 Gene3D G3DSA:3.20.20.70 1 258 7.8E-62 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 Pfam PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase 257 447 2.5E-63 T 28-03-2018 IPR001240 N-(5'phosphoribosyl) anthranilate isomerase (PRAI) GO:0004640|GO:0006568 KEGG: 00400+5.3.1.24 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 SUPERFAMILY SSF51366 257 450 2.04E-58 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 SUPERFAMILY SSF51366 1 251 4.71E-85 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 Hamap MF_00134_B Indole-3-glycerol phosphate synthase [trpC]. 3 254 35.526 T 28-03-2018 IPR013798 Indole-3-glycerol phosphate synthase GO:0004425 KEGG: 00400+4.1.1.48 CI104_RS14180 cf528e20c8532cf57388abdfdc3e507c 452 ProSitePatterns PS00614 Indole-3-glycerol phosphate synthase signature. 50 68 - T 28-03-2018 IPR001468 Indole-3-glycerol phosphate synthase, conserved site GO:0004425|GO:0006568 KEGG: 00400+4.1.1.48 CI104_RS17930 f9614639094fec5f9f5c1339c1ad286b 393 Gene3D G3DSA:1.20.1250.20 197 385 3.0E-22 T 28-03-2018 CI104_RS17930 f9614639094fec5f9f5c1339c1ad286b 393 Gene3D G3DSA:1.20.1250.20 1 196 4.1E-17 T 28-03-2018 CI104_RS17930 f9614639094fec5f9f5c1339c1ad286b 393 SUPERFAMILY SSF103473 6 386 4.58E-48 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS17930 f9614639094fec5f9f5c1339c1ad286b 393 Pfam PF07690 Major Facilitator Superfamily 23 342 2.2E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 Gene3D G3DSA:3.10.20.10 40 126 5.7E-22 T 28-03-2018 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 PIRSF PIRSF015626 4 278 1.5E-82 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 Pfam PF02634 FdhD/NarQ family 38 275 3.0E-70 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 TIGRFAM TIGR00129 fdhD_narQ: formate dehydrogenase family accessory protein FdhD 34 276 9.4E-98 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 Hamap MF_00187 Sulfurtransferase FdhD [fdhD]. 13 276 33.212 T 28-03-2018 IPR003786 Sulfur carrier protein FdhD GO:0016783 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 Gene3D G3DSA:3.40.140.10 142 278 1.6E-41 T 28-03-2018 CI104_RS24380 18a04e5c4cb26b20d70c5c52193fc820 278 SUPERFAMILY SSF53927 23 276 3.31E-79 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS24040 7ecc4bb803c90f74bcd711c421e0cc55 296 SUPERFAMILY SSF51730 22 294 3.34E-98 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CI104_RS24040 7ecc4bb803c90f74bcd711c421e0cc55 296 Gene3D G3DSA:3.20.20.220 1 296 2.8E-101 T 28-03-2018 IPR029041 FAD-linked oxidoreductase-like CI104_RS24040 7ecc4bb803c90f74bcd711c421e0cc55 296 Pfam PF02219 Methylenetetrahydrofolate reductase 16 291 1.1E-108 T 28-03-2018 IPR003171 Methylenetetrahydrofolate reductase GO:0004489|GO:0006555|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841|Reactome: R-HSA-196757 CI104_RS24040 7ecc4bb803c90f74bcd711c421e0cc55 296 TIGRFAM TIGR00676 fadh2: methylenetetrahydrofolate reductase [NAD(P)H] 25 290 2.2E-107 T 28-03-2018 IPR004620 5,10-methylenetetrahydrofolate reductase GO:0004489|GO:0005829|GO:0009086|GO:0055114 KEGG: 00670+1.5.1.20|KEGG: 00720+1.5.1.20|MetaCyc: PWY-2201|MetaCyc: PWY-3841 CI104_RS02850 3edccf6beb9952491690c52a15ea225f 241 SUPERFAMILY SSF102588 5 240 1.07E-52 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CI104_RS02850 3edccf6beb9952491690c52a15ea225f 241 Gene3D G3DSA:3.40.50.10320 1 241 4.8E-38 T 28-03-2018 IPR024078 Putative deacetylase LmbE-like domain Reactome: R-HSA-162710 CI104_RS02850 3edccf6beb9952491690c52a15ea225f 241 Pfam PF02585 GlcNAc-PI de-N-acetylase 9 138 6.6E-23 T 28-03-2018 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related Reactome: R-HSA-162710 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 Gene3D G3DSA:1.10.10.60 65 128 8.2E-14 T 28-03-2018 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 SUPERFAMILY SSF46689 12 61 1.03E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 SUPERFAMILY SSF46689 64 112 7.17E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 Pfam PF12833 Helix-turn-helix domain 34 110 6.6E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 64 106 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 SMART SM00342 27 110 3.0E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS12875 44b8cf57f71bd50915904124b959e252 128 Gene3D G3DSA:1.10.10.60 1 64 6.9E-19 T 28-03-2018 CI104_RS17765 c1ef5950e7a68e3b4bd9bc09c0d87929 82 SUPERFAMILY SSF47413 2 72 1.44E-27 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS17765 c1ef5950e7a68e3b4bd9bc09c0d87929 82 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 77 2.3E-29 T 28-03-2018 CI104_RS17765 c1ef5950e7a68e3b4bd9bc09c0d87929 82 Gene3D G3DSA:1.10.260.40 1 73 8.4E-17 T 28-03-2018 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 150 178 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 Gene3D G3DSA:3.40.50.1970 3 159 9.6E-29 T 28-03-2018 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 Gene3D G3DSA:1.20.1090.10 160 363 1.0E-41 T 28-03-2018 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 SUPERFAMILY SSF56796 3 356 2.62E-87 T 28-03-2018 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 348 1.7E-63 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 241 261 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS24025 b8d0a8b6fdf5b64d78514b4368fe6d22 367 PIRSF PIRSF000112 1 360 8.1E-97 T 28-03-2018 CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 Gene3D G3DSA:3.40.50.620 2 144 2.1E-31 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 PRINTS PR01438 Universal stress protein signature 105 117 7.8E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 PRINTS PR01438 Universal stress protein signature 2 20 7.8E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 PRINTS PR01438 Universal stress protein signature 122 144 7.8E-10 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 Pfam PF00582 Universal stress protein family 1 144 3.5E-29 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 PIRSF PIRSF006276 1 144 4.8E-17 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS13740 c0db4aa6e03a8b884acbcc60c4757f3f 144 SUPERFAMILY SSF52402 3 144 1.93E-30 T 28-03-2018 CI104_RS22060 1c4b2da42647b55749033af1322fb6ed 359 Gene3D G3DSA:3.20.20.10 4 235 6.8E-26 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS22060 1c4b2da42647b55749033af1322fb6ed 359 Pfam PF01168 Alanine racemase, N-terminal domain 11 229 8.7E-21 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS22060 1c4b2da42647b55749033af1322fb6ed 359 SUPERFAMILY SSF51419 12 228 8.11E-25 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 47 63 2.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 33 47 2.2E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 SUPERFAMILY SSF46785 8 77 2.66E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 Pfam PF00392 Bacterial regulatory proteins, gntR family 10 73 1.2E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 SMART SM00345 14 73 6.6E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 Pfam PF07729 FCD domain 105 230 6.5E-20 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 SMART SM00895 105 231 2.6E-22 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 Gene3D G3DSA:1.10.10.10 2 74 4.6E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 Gene3D G3DSA:1.20.120.530 96 247 5.8E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS27315 cf50ce198b4a750bae4c92170d3cab8b 262 SUPERFAMILY SSF48008 103 239 1.41E-26 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS12425 8a0e086e13b24949d80178374d62b7c9 173 SUPERFAMILY SSF49329 24 173 2.75E-48 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CI104_RS12425 8a0e086e13b24949d80178374d62b7c9 173 ProSitePatterns PS00332 Copper/Zinc superoxide dismutase signature 2. 161 172 - T 28-03-2018 IPR018152 Superoxide dismutase, copper/zinc, binding site GO:0004784|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CI104_RS12425 8a0e086e13b24949d80178374d62b7c9 173 Gene3D G3DSA:2.60.40.200 17 173 3.6E-38 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CI104_RS12425 8a0e086e13b24949d80178374d62b7c9 173 Pfam PF00080 Copper/zinc superoxide dismutase (SODC) 34 172 1.7E-33 T 28-03-2018 IPR001424 Superoxide dismutase, copper/zinc binding domain GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-3299685 CI104_RS06555 991988ac7332274104219102b2bb514b 156 Pfam PF10777 Inner membrane protein YlaC 1 152 1.1E-67 T 28-03-2018 IPR019713 Inner membrane protein YlaC CI104_RS09970 a86ffe84a6949bb775727aa627627264 390 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 241 250 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CI104_RS09970 a86ffe84a6949bb775727aa627627264 390 Gene3D G3DSA:3.90.1150.10 278 390 1.5E-25 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS09970 a86ffe84a6949bb775727aa627627264 390 Gene3D G3DSA:3.40.640.10 60 277 3.9E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS09970 a86ffe84a6949bb775727aa627627264 390 Pfam PF00155 Aminotransferase class I and II 44 384 5.8E-52 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS09970 a86ffe84a6949bb775727aa627627264 390 SUPERFAMILY SSF53383 6 388 7.58E-97 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS08965 7c6f751d8aa12d12b7b35fce66fed45d 382 Pfam PF07690 Major Facilitator Superfamily 12 227 4.8E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS08965 7c6f751d8aa12d12b7b35fce66fed45d 382 SUPERFAMILY SSF103473 6 375 4.84E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS08965 7c6f751d8aa12d12b7b35fce66fed45d 382 Hamap MF_01149 Uncharacterized MFS-type transporter YcaD [ycaD]. 1 382 36.379 T 28-03-2018 IPR023745 MSF-type transporter, YcaD CI104_RS08965 7c6f751d8aa12d12b7b35fce66fed45d 382 Gene3D G3DSA:1.20.1250.20 4 188 2.3E-22 T 28-03-2018 CI104_RS08965 7c6f751d8aa12d12b7b35fce66fed45d 382 Gene3D G3DSA:1.20.1250.20 189 379 2.5E-19 T 28-03-2018 CI104_RS19365 80c1719ac5a8ab6e95a17aca1be4c41b 109 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 108 1.2E-52 T 28-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system CI104_RS12625 7e3d8908511034d7a2983563ae73133d 462 Gene3D G3DSA:3.40.50.1220 289 462 1.1E-91 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS12625 7e3d8908511034d7a2983563ae73133d 462 Pfam PF02233 NAD(P) transhydrogenase beta subunit 7 460 1.2E-202 T 28-03-2018 IPR034300 NADP transhydrogenase beta-like domain KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CI104_RS12625 7e3d8908511034d7a2983563ae73133d 462 SUPERFAMILY SSF52467 289 462 9.35E-79 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS12625 7e3d8908511034d7a2983563ae73133d 462 PIRSF PIRSF000204 1 462 6.9E-238 T 28-03-2018 IPR012136 NADP transhydrogenase, beta subunit GO:0008750|GO:0016021|GO:0050661|GO:0055114 KEGG: 00760+1.6.1.2 CI104_RS12155 02c6bc1df52f892c3c3b0b93d0a03787 138 Pfam PF02657 Fe-S metabolism associated domain 12 132 1.3E-42 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CI104_RS12155 02c6bc1df52f892c3c3b0b93d0a03787 138 Hamap MF_01832 Cysteine desulfuration protein SufE [sufE]. 1 138 41.686 T 28-03-2018 IPR023939 Cysteine desulfuration protein SufE GO:0006790|GO:0016226 CI104_RS12155 02c6bc1df52f892c3c3b0b93d0a03787 138 Gene3D G3DSA:3.90.1010.10 1 137 2.7E-47 T 28-03-2018 CI104_RS12155 02c6bc1df52f892c3c3b0b93d0a03787 138 SUPERFAMILY SSF82649 3 135 3.03E-44 T 28-03-2018 CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 Gene3D G3DSA:2.40.50.100 252 293 6.8E-11 T 28-03-2018 CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 SUPERFAMILY SSF52540 4 243 4.03E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 Pfam PF08402 TOBE domain 281 353 5.3E-12 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 SUPERFAMILY SSF50331 236 364 6.07E-31 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 ProSitePatterns PS00211 ABC transporters family signature. 134 148 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 Pfam PF00005 ABC transporter 20 161 1.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 SMART SM00382 28 219 6.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 Gene3D G3DSA:3.40.50.300 1 251 1.8E-69 T 28-03-2018 CI104_RS23420 ca2b1bf9da16417c70341a0142036764 369 Gene3D G3DSA:2.40.50.140 294 346 8.8E-10 T 28-03-2018 CI104_RS18435 b83e5e3ff0933429b531dcd906fc765d 439 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 423 2.2E-132 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CI104_RS18435 b83e5e3ff0933429b531dcd906fc765d 439 PIRSF PIRSF006351 1 432 7.2E-136 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS18435 b83e5e3ff0933429b531dcd906fc765d 439 Pfam PF02378 Phosphotransferase system, EIIC 32 351 5.1E-59 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS18435 b83e5e3ff0933429b531dcd906fc765d 439 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 423 2.2E-132 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 ProSitePatterns PS00831 Ribosomal protein L27 signature. 34 48 - T 28-03-2018 IPR018261 Ribosomal protein L27, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 TIGRFAM TIGR00062 L27: ribosomal protein bL27 1 83 1.7E-43 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 Hamap MF_00539 50S ribosomal protein L27 [rpmA]. 1 85 29.129 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 Pfam PF01016 Ribosomal L27 protein 2 82 3.8E-39 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 PRINTS PR00063 Ribosomal protein L27 signature 29 53 4.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 PRINTS PR00063 Ribosomal protein L27 signature 54 78 4.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 PRINTS PR00063 Ribosomal protein L27 signature 4 28 4.1E-38 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 SUPERFAMILY SSF110324 2 82 2.06E-34 T 28-03-2018 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 ProDom PD003114 RIBOSOMAL L27 50S RIBONUCLEOPROTEIN CHLOROPLAST MITOCHONDRIAL PEPTIDE 60S TRANSIT PRECURSOR 28 71 2.0E-18 T 28-03-2018 IPR001684 Ribosomal protein L27 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02780 5c04fe49375f214615261c0f0a7d4010 85 Gene3D G3DSA:2.40.50.100 20 84 7.9E-31 T 28-03-2018 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 Hamap MF_00013 Octanoyltransferase [lipB]. 5 206 37.437 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 Pfam PF03099 Biotin/lipoate A/B protein ligase family 62 159 8.1E-7 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 TIGRFAM TIGR00214 lipB: lipoyl(octanoyl) transferase 27 204 6.7E-82 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 ProDom PD006086 LIGASE LIPOATE-PROTEIN B TRANSFERASE ACYLTRANSFERASE LIPOYLTRANSFERASE LIPOYL-ACYL-CARRIER 2.3.1.- PROTEIN-PROTEIN- N-LIPOYLTRANSFERASE 75 128 5.0E-23 T 28-03-2018 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 ProSitePatterns PS01313 Lipoate-protein ligase B signature. 71 86 - T 28-03-2018 IPR020605 Octanoyltransferase, conserved site GO:0005737|GO:0009107|GO:0016415 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 Gene3D G3DSA:3.30.930.10 1 204 4.2E-60 T 28-03-2018 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 SUPERFAMILY SSF55681 5 204 5.8E-68 T 28-03-2018 CI104_RS07505 ca3130d7dec4a437331050e47fe731b7 213 PIRSF PIRSF016262 1 211 3.2E-58 T 28-03-2018 IPR000544 Octanoyltransferase GO:0005737|GO:0009107|GO:0033819 KEGG: 00785+2.3.1.181|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS03380 001db0ce5c2cc7cd7f546e195691621f 254 Pfam PF08021 Siderophore-interacting FAD-binding domain 22 132 4.4E-31 T 28-03-2018 IPR013113 FAD-binding 9, siderophore-interacting CI104_RS03380 001db0ce5c2cc7cd7f546e195691621f 254 SUPERFAMILY SSF63380 3 137 1.65E-13 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS03380 001db0ce5c2cc7cd7f546e195691621f 254 Pfam PF04954 Siderophore-interacting protein 142 253 6.7E-20 T 28-03-2018 IPR007037 Siderophore-interacting protein CI104_RS03380 001db0ce5c2cc7cd7f546e195691621f 254 Gene3D G3DSA:2.40.30.10 10 132 2.6E-27 T 28-03-2018 CI104_RS03380 001db0ce5c2cc7cd7f546e195691621f 254 Gene3D G3DSA:3.40.50.80 133 254 4.3E-22 T 28-03-2018 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 SMART SM00420 11 63 1.1E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 Pfam PF00455 DeoR C terminal sensor domain 80 237 1.9E-47 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 ProSitePatterns PS00894 DeoR-type HTH domain signature. 11 45 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 SMART SM01134 77 238 1.9E-59 T 28-03-2018 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 Pfam PF08220 DeoR-like helix-turn-helix domain 11 66 5.5E-22 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 29 43 7.4E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 43 61 7.4E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 Gene3D G3DSA:3.40.50.1360 75 258 1.6E-36 T 28-03-2018 CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 SUPERFAMILY SSF46785 9 75 1.14E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 Gene3D G3DSA:1.10.10.10 6 74 5.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24465 776f12e9456ae7e4be96dffb6a8ac775 267 SUPERFAMILY SSF100950 79 236 1.99E-25 T 28-03-2018 CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 394 560 5.6E-62 T 28-03-2018 IPR000160 GGDEF domain CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 Pfam PF00990 Diguanylate cyclase, GGDEF domain 398 557 4.9E-49 T 28-03-2018 IPR000160 GGDEF domain CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 Gene3D G3DSA:3.30.70.270 391 564 1.4E-54 T 28-03-2018 CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 SMART SM00267 387 561 1.5E-66 T 28-03-2018 IPR000160 GGDEF domain CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 SUPERFAMILY SSF55073 403 562 2.2E-46 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 Gene3D G3DSA:3.30.450.20 231 350 7.0E-7 T 28-03-2018 CI104_RS15930 4c05372d1de1d719ac4d67a3ec808b2f 564 Pfam PF17151 Periplasmic sensor domain 41 226 5.2E-82 T 28-03-2018 IPR033416 Periplasmic sensor domain CHASE7 CI104_RS11140 4321e8fe8df24b25e461b268c8f74c10 117 SUPERFAMILY SSF46894 45 110 1.36E-7 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS11140 4321e8fe8df24b25e461b268c8f74c10 117 SMART SM00421 50 107 0.0068 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS11140 4321e8fe8df24b25e461b268c8f74c10 117 Pfam PF00196 Bacterial regulatory proteins, luxR family 52 105 6.4E-7 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS26060 b66e1c19f85396c918c3c895ac162756 1316 Pfam PF07916 TraG-like protein, N-terminal region 215 489 4.1E-19 T 28-03-2018 IPR012931 TraG-like, N-terminal CI104_RS26060 b66e1c19f85396c918c3c895ac162756 1316 Pfam PF07916 TraG-like protein, N-terminal region 5 128 1.5E-13 T 28-03-2018 IPR012931 TraG-like, N-terminal CI104_RS04710 4d6f3550f94c6fde8caabe14e0a5b387 282 TIGRFAM TIGR00668 apaH: bis(5'-nucleosyl)-tetraphosphatase (symmetrical) 1 278 6.2E-164 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CI104_RS04710 4d6f3550f94c6fde8caabe14e0a5b387 282 SUPERFAMILY SSF56300 1 261 6.33E-59 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS04710 4d6f3550f94c6fde8caabe14e0a5b387 282 Pfam PF00149 Calcineurin-like phosphoesterase 4 139 2.6E-13 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS04710 4d6f3550f94c6fde8caabe14e0a5b387 282 PIRSF PIRSF000903 1 274 1.0E-124 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CI104_RS04710 4d6f3550f94c6fde8caabe14e0a5b387 282 Gene3D G3DSA:3.60.21.10 1 281 1.9E-47 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS04710 4d6f3550f94c6fde8caabe14e0a5b387 282 Hamap MF_00199 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical [apaH]. 1 271 52.226 T 28-03-2018 IPR004617 Bis(5'-nucleosyl)-tetraphosphatase (symmetrical) GO:0008803 KEGG: 00230+3.6.1.41 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 Gene3D G3DSA:3.40.50.720 7 187 1.8E-62 T 28-03-2018 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 SUPERFAMILY SSF55347 176 488 9.81E-113 T 28-03-2018 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 Hamap MF_00966 Glucose-6-phosphate 1-dehydrogenase [zwf]. 9 489 90.88 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 PIRSF PIRSF000110 1 491 4.5E-181 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 TIGRFAM TIGR00871 zwf: glucose-6-phosphate dehydrogenase 9 489 1.0E-205 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 ProSitePatterns PS00069 Glucose-6-phosphate dehydrogenase active site. 176 182 - T 28-03-2018 IPR019796 Glucose-6-phosphate dehydrogenase, active site GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 Pfam PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain 13 186 1.7E-58 T 28-03-2018 IPR022674 Glucose-6-phosphate dehydrogenase, NAD-binding GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 SUPERFAMILY SSF51735 4 189 2.91E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 Gene3D G3DSA:3.30.360.10 188 490 1.2E-125 T 28-03-2018 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 166 194 7.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 218 235 7.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 142 155 7.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 327 353 7.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 PRINTS PR00079 Glucose-6-phosphate dehydrogenase signature 236 252 7.2E-47 T 28-03-2018 IPR001282 Glucose-6-phosphate dehydrogenase GO:0004345|GO:0006006|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS15320 304668b349c6b79a8443ed2511f003cf 491 Pfam PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain 188 488 6.6E-116 T 28-03-2018 IPR022675 Glucose-6-phosphate dehydrogenase, C-terminal GO:0004345|GO:0006006|GO:0050661|GO:0055114 KEGG: 00030+1.1.1.49|KEGG: 00480+1.1.1.49|MetaCyc: PWY-7268 CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 Gene3D G3DSA:3.40.50.300 2 626 8.8E-37 T 28-03-2018 CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 SUPERFAMILY SSF52540 4 171 9.0E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 Pfam PF07664 Ferrous iron transport protein B C terminus 455 507 1.0E-21 T 28-03-2018 IPR011640 Ferrous iron transport protein B, C-terminal GO:0015093|GO:0015684|GO:0016021 CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 TIGRFAM TIGR00437 feoB: ferrous iron transport protein B 10 687 9.7E-247 T 28-03-2018 IPR003373 Ferrous iron transport protein B GO:0005525|GO:0015093|GO:0015684|GO:0016021 CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 Pfam PF07670 Nucleoside recognition 512 689 2.1E-36 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 Pfam PF07670 Nucleoside recognition 353 443 6.2E-13 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CI104_RS01695 8baa8edcdb5133513f7c58b4bfd9b83b 773 Pfam PF02421 Ferrous iron transport protein B 5 162 6.2E-65 T 28-03-2018 IPR030389 FeoB-type guanine nucleotide-binding (G) domain GO:0005525 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82714 722 806 9.55E-17 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Gene3D G3DSA:1.20.1640.10 809 1025 1.9E-36 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Gene3D G3DSA:1.20.1640.10 275 500 1.7E-44 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Gene3D G3DSA:3.30.70.1430 39 141 2.5E-28 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82693 275 331 6.02E-21 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82693 137 183 6.02E-21 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82693 39 132 1.1E-26 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82714 183 273 7.32E-23 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82693 563 669 5.75E-23 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82866 297 498 2.88E-46 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Gene3D G3DSA:3.30.2090.10 181 274 3.1E-18 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Pfam PF00873 AcrB/AcrD/AcrF family 3 1023 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Gene3D G3DSA:3.30.70.1430 565 666 1.9E-14 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 2 1026 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 471 494 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 550 567 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 619 633 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 337 360 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 392 416 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 9 33 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 37 55 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 364 385 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 PRINTS PR00702 Acriflavin resistance protein family signature 446 469 1.2E-101 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 SUPERFAMILY SSF82866 803 1023 1.83E-40 T 28-03-2018 CI104_RS08505 be3d16da237163ca513ce143fedd2fb6 1031 Gene3D G3DSA:3.30.70.1440 670 766 1.4E-15 T 28-03-2018 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 SUPERFAMILY SSF51569 1 218 7.6E-66 T 28-03-2018 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 ProSitePatterns PS00958 Transaldolase active site. 82 99 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 Gene3D G3DSA:3.20.20.70 1 220 5.3E-61 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 TIGRFAM TIGR00875 fsa_talC_mipB: fructose-6-phosphate aldolase 1 214 1.1E-99 T 28-03-2018 IPR004731 Transaldolase type 3B/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 Hamap MF_00496 Fructose-6-phosphate aldolase [fsa]. 1 220 49.81 T 28-03-2018 IPR023001 Fructose-6-phosphate aldolase GO:0016832 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 ProSitePatterns PS01054 Transaldolase signature 1. 24 32 - T 28-03-2018 IPR018225 Transaldolase, active site GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS24020 7baca85f4d42e5c06b9603e47b831271 220 Pfam PF00923 Transaldolase/Fructose-6-phosphate aldolase 3 208 2.4E-47 T 28-03-2018 IPR001585 Transaldolase/Fructose-6-phosphate aldolase GO:0005975 KEGG: 00030+2.2.1.2|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-163754|Reactome: R-HSA-71336 CI104_RS24925 36da56878d19fffc1eca1fcd79dbf730 367 TIGRFAM TIGR02380 ECA_wecA: undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase 8 351 1.6E-164 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CI104_RS24925 36da56878d19fffc1eca1fcd79dbf730 367 Pfam PF00953 Glycosyl transferase family 4 76 232 1.7E-29 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CI104_RS24925 36da56878d19fffc1eca1fcd79dbf730 367 Hamap MF_02030 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase [wecA]. 9 353 28.194 T 28-03-2018 IPR012750 Undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphatetransferase GO:0000287|GO:0009103|GO:0009276|GO:0016021|GO:0016780|GO:0030145 MetaCyc: PWY-7290|MetaCyc: PWY-7530|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Pfam PF13184 NusA-like KH domain 230 297 1.6E-27 T 28-03-2018 IPR025249 KH domain, NusA-like GO:0003723 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SUPERFAMILY SSF47794 429 492 5.02E-18 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SUPERFAMILY SSF47794 355 415 5.02E-17 T 28-03-2018 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical GO:0000166 Reactome: R-HSA-912446 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Gene3D G3DSA:3.30.1480.10 1 128 3.2E-45 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SUPERFAMILY SSF69705 1 126 2.75E-41 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Gene3D G3DSA:3.30.300.20 278 347 1.9E-12 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Gene3D G3DSA:1.10.150.20 352 421 2.9E-15 T 28-03-2018 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Gene3D G3DSA:1.10.150.20 427 495 3.3E-17 T 28-03-2018 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Hamap MF_00945_B Transcription termination/antitermination protein NusA [nusA]. 2 410 29.239 T 28-03-2018 IPR030842 Transcription termination/antitermination protein NusA, bacterial GO:0006353|GO:0031564 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Pfam PF14520 Helix-hairpin-helix domain 432 486 7.2E-9 T 28-03-2018 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SUPERFAMILY SSF50249 132 199 3.76E-17 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Pfam PF08529 NusA N-terminal domain 4 123 7.1E-37 T 28-03-2018 IPR013735 Transcription factor NusA, N-terminal GO:0003700|GO:0031554 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SUPERFAMILY SSF54814 279 343 3.18E-15 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 440 489 3.6E-19 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 TIGRFAM TIGR01954 nusA_Cterm_rpt: transcription termination factor NusA, C-terminal duplication 365 414 1.7E-20 T 28-03-2018 IPR010214 Transcription termination factor NusA, C-terminal duplication CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SUPERFAMILY SSF54814 201 278 3.73E-29 T 28-03-2018 IPR009019 K homology domain, prokaryotic type GO:0003723 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 SMART SM00316 133 200 4.9E-8 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 TIGRFAM TIGR01953 NusA: transcription termination factor NusA 4 342 9.6E-131 T 28-03-2018 IPR010213 Transcription termination factor NusA GO:0003723 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Gene3D G3DSA:2.40.50.140 129 198 5.2E-13 T 28-03-2018 CI104_RS02890 cb4f47edc268abba72b1658a8e1a48b2 495 Gene3D G3DSA:3.30.300.20 199 276 6.2E-33 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS15440 c8523316461faa9008906f1b2752e642 130 Pfam PF06366 Flagellar protein FlhE 28 130 3.7E-37 T 28-03-2018 IPR009420 Flagellar protein FlhE CI104_RS13105 80f83ec587d1d09370ac9e4cd3e36efb 143 SUPERFAMILY SSF82784 1 141 2.75E-40 T 28-03-2018 IPR003718 OsmC/Ohr family CI104_RS13105 80f83ec587d1d09370ac9e4cd3e36efb 143 Gene3D G3DSA:3.30.300.20 2 143 1.0E-29 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS13105 80f83ec587d1d09370ac9e4cd3e36efb 143 Pfam PF02566 OsmC-like protein 44 138 3.2E-18 T 28-03-2018 IPR003718 OsmC/Ohr family CI104_RS13105 80f83ec587d1d09370ac9e4cd3e36efb 143 TIGRFAM TIGR03562 osmo_induc_OsmC: peroxiredoxin, OsmC subfamily 5 138 1.8E-60 T 28-03-2018 IPR019904 Peroxiredoxin OsmC GO:0004601|GO:0006979 KEGG: 00480+1.11.1.15 CI104_RS20675 43963e5f69d490afe89512cb3d85a50c 100 SUPERFAMILY SSF54909 1 98 4.54E-24 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS20675 43963e5f69d490afe89512cb3d85a50c 100 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 75 3.5E-12 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CI104_RS20675 43963e5f69d490afe89512cb3d85a50c 100 Gene3D G3DSA:3.30.70.100 1 94 2.8E-18 T 28-03-2018 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 58 73 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Gene3D G3DSA:3.30.70.870 394 469 9.2E-11 T 28-03-2018 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 SUPERFAMILY SSF54980 393 468 3.45E-17 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Gene3D G3DSA:2.40.30.10 281 387 3.6E-21 T 28-03-2018 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Pfam PF16658 Class II release factor RF3, C-terminal domain 387 514 7.4E-47 T 28-03-2018 IPR032090 Peptide chain release factor 3, C-terminal CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 SUPERFAMILY SSF52540 10 277 1.95E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 PRINTS PR00315 GTP-binding elongation factor signature 101 112 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 PRINTS PR00315 GTP-binding elongation factor signature 15 28 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 PRINTS PR00315 GTP-binding elongation factor signature 137 146 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 PRINTS PR00315 GTP-binding elongation factor signature 85 95 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 PRINTS PR00315 GTP-binding elongation factor signature 65 73 6.6E-11 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Pfam PF00009 Elongation factor Tu GTP binding domain 13 277 2.6E-46 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Pfam PF03144 Elongation factor Tu domain 2 314 380 3.4E-10 T 28-03-2018 IPR004161 Translation elongation factor EFTu-like, domain 2 GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Gene3D G3DSA:3.40.50.300 8 280 2.1E-36 T 28-03-2018 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 15 156 1.4E-18 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 Hamap MF_00072 Peptide chain release factor 3 [prfC]. 4 527 52.511 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 SUPERFAMILY SSF50447 262 393 8.95E-28 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS21215 c6f1fb732016c6337010af8f74ae79eb 529 TIGRFAM TIGR00503 prfC: peptide chain release factor 3 3 529 0.0 T 28-03-2018 IPR004548 Peptide chain release factor 3 GO:0003924|GO:0005737|GO:0006415 CI104_RS10010 f3f8fbf225ee8f62c75b077ec29ef424 244 Gene3D G3DSA:3.40.50.300 5 228 1.5E-16 T 28-03-2018 CI104_RS10010 f3f8fbf225ee8f62c75b077ec29ef424 244 SUPERFAMILY SSF52540 5 230 9.72E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 SUPERFAMILY SSF55781 2 159 7.85E-30 T 28-03-2018 IPR029016 GAF domain-like CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Pfam PF02896 PEP-utilising enzyme, TIM barrel domain 420 707 1.4E-107 T 28-03-2018 IPR000121 PEP-utilising enzyme, C-terminal GO:0016310|GO:0016772 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 SMART SM00065 17 164 7.7E-29 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 SUPERFAMILY SSF52009 293 412 3.01E-24 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 ProSitePatterns PS00742 PEP-utilizing enzymes signature 2. 613 631 - T 28-03-2018 IPR023151 PEP-utilising enzyme, conserved site GO:0016772 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 SUPERFAMILY SSF51621 419 715 2.88E-97 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 TIGRFAM TIGR01417 PTS_I_fam: phosphoenolpyruvate-protein phosphotransferase 175 729 5.1E-125 T 28-03-2018 IPR006318 Phosphotransferase system, enzyme I-like GO:0016772 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 666 678 2.2E-24 T 28-03-2018 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 459 478 2.2E-24 T 28-03-2018 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 613 628 2.2E-24 T 28-03-2018 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 PRINTS PR01736 Phosphoenolpyruvate-protein phosphotransferase signature 630 645 2.2E-24 T 28-03-2018 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Gene3D G3DSA:1.10.274.10 195 303 2.4E-27 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 ProSitePatterns PS00370 PEP-utilizing enzymes phosphorylation site signature. 351 362 - T 28-03-2018 IPR018274 PEP-utilising enzyme, active site GO:0016310|GO:0016772 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Pfam PF05524 PEP-utilising enzyme, N-terminal 174 294 2.6E-22 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Pfam PF01590 GAF domain 18 152 6.5E-15 T 28-03-2018 IPR003018 GAF domain GO:0005515 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Gene3D G3DSA:3.50.30.10 304 419 9.0E-18 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Gene3D G3DSA:3.30.450.40 1 173 1.1E-28 T 28-03-2018 IPR029016 GAF domain-like CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Gene3D G3DSA:3.20.20.60 420 739 3.3E-86 T 28-03-2018 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 SUPERFAMILY SSF47831 197 309 4.84E-25 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS20360 4a9ac10ee3e9187e403b4e64fdc85cca 748 Pfam PF00391 PEP-utilising enzyme, mobile domain 320 391 9.3E-15 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS17640 d44747d75e6d2f48ec153fef5edb77ba 184 Pfam PF12850 Calcineurin-like phosphoesterase superfamily domain 3 162 5.6E-24 T 28-03-2018 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type Reactome: R-HSA-3238698 CI104_RS17640 d44747d75e6d2f48ec153fef5edb77ba 184 Gene3D G3DSA:3.60.21.10 1 184 1.2E-27 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS17640 d44747d75e6d2f48ec153fef5edb77ba 184 TIGRFAM TIGR00040 yfcE: phosphodiesterase, MJ0936 family 3 170 8.5E-44 T 28-03-2018 IPR000979 Phosphodiesterase MJ0936/Vps29 Reactome: R-HSA-3238698 CI104_RS17640 d44747d75e6d2f48ec153fef5edb77ba 184 SUPERFAMILY SSF56300 3 164 5.32E-37 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS17640 d44747d75e6d2f48ec153fef5edb77ba 184 ProSitePatterns PS01269 Uncharacterized protein family UPF0025 signature. 121 145 - T 28-03-2018 IPR020935 Phosphodiesterase YfcE, conserved site CI104_RS24100 4405ab35fa68e70a56eca53b5c1051fd 328 Hamap MF_02039 Cell division protein FtsN [ftsN]. 36 328 34.595 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CI104_RS24100 4405ab35fa68e70a56eca53b5c1051fd 328 SUPERFAMILY SSF110997 253 324 3.4E-19 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS24100 4405ab35fa68e70a56eca53b5c1051fd 328 TIGRFAM TIGR02223 ftsN: cell division protein FtsN 2 324 7.9E-93 T 28-03-2018 IPR011930 Cell division protein FtsN GO:0005515 CI104_RS24100 4405ab35fa68e70a56eca53b5c1051fd 328 Gene3D G3DSA:3.30.70.1070 250 325 3.1E-15 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS24100 4405ab35fa68e70a56eca53b5c1051fd 328 Pfam PF05036 Sporulation related domain 255 322 1.9E-16 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS06745 e6ddf9ccaa15ef7510fe468aa8130426 690 Pfam PF10145 Phage-related minor tail protein 86 284 3.0E-16 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS06745 e6ddf9ccaa15ef7510fe468aa8130426 690 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 48 385 5.5E-15 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS06745 e6ddf9ccaa15ef7510fe468aa8130426 690 Gene3D G3DSA:1.20.5.1230 9 609 5.1E-8 T 28-03-2018 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 Gene3D G3DSA:1.10.40.30 391 445 6.9E-32 T 28-03-2018 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 SUPERFAMILY SSF48557 4 448 1.48E-107 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 ProSitePatterns PS00163 Fumarate lyases signature. 294 303 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 251 278 2.0E-17 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 117 135 2.0E-17 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 294 310 2.0E-17 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 PRINTS PR00149 Fumarate lyase superfamily signature 163 181 2.0E-17 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 TIGRFAM TIGR00928 purB: adenylosuccinate lyase 12 455 1.1E-155 T 28-03-2018 IPR004769 Adenylosuccinate lyase GO:0004018|GO:0009152 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 Pfam PF08328 Adenylosuccinate lyase C-terminal 331 445 2.8E-52 T 28-03-2018 IPR013539 Adenylosuccinate lyase PurB, C-terminal GO:0004018|GO:0006188 KEGG: 00230+4.3.2.2|KEGG: 00250+4.3.2.2|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7219|MetaCyc: PWY-7234 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 Gene3D G3DSA:1.10.275.10 1 117 1.7E-43 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 Gene3D G3DSA:1.20.200.10 118 390 4.7E-84 T 28-03-2018 CI104_RS10985 d19f4c6daab0f3da8f01d7df4f6a08eb 455 Pfam PF00206 Lyase 14 312 1.2E-83 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 SUPERFAMILY SSF56601 16 292 4.54E-75 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 39 272 2.2E-101 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 Gene3D G3DSA:2.60.410.10 311 382 5.4E-17 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 292 383 8.8E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 Gene3D G3DSA:3.40.710.10 27 310 4.4E-47 T 28-03-2018 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 SMART SM00936 292 383 1.9E-32 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 SUPERFAMILY SSF69189 292 385 5.1E-23 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 72 83 5.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 131 148 5.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS07515 385c19ab97df74b75a9661db19bbfed1 403 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 158 171 5.7E-17 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS04365 95ecaaf631d3aee9c13fdc2ba28a1475 420 Gene3D G3DSA:3.90.1710.10 105 247 5.9E-60 T 28-03-2018 CI104_RS04365 95ecaaf631d3aee9c13fdc2ba28a1475 420 Gene3D G3DSA:1.10.10.660 40 104 7.3E-34 T 28-03-2018 IPR024033 Uncharacterised domain, YlbE CI104_RS04365 95ecaaf631d3aee9c13fdc2ba28a1475 420 Gene3D G3DSA:3.90.1700.10 250 413 5.8E-75 T 28-03-2018 CI104_RS04365 95ecaaf631d3aee9c13fdc2ba28a1475 420 Pfam PF06545 Protein of unknown function (DUF1116) 87 302 3.6E-99 T 28-03-2018 IPR009499 Protein of unknown function DUF1116 CI104_RS22330 f14097ca4533c5f37f40e84333bbb5ce 514 SUPERFAMILY SSF103473 15 451 3.84E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS22330 f14097ca4533c5f37f40e84333bbb5ce 514 Gene3D G3DSA:1.20.1250.20 231 461 1.6E-9 T 28-03-2018 CI104_RS22330 f14097ca4533c5f37f40e84333bbb5ce 514 Pfam PF13347 MFS/sugar transport protein 17 454 3.6E-44 T 28-03-2018 CI104_RS22330 f14097ca4533c5f37f40e84333bbb5ce 514 Gene3D G3DSA:1.20.1250.20 12 216 4.5E-19 T 28-03-2018 CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 Gene3D G3DSA:3.30.450.40 80 251 2.8E-50 T 28-03-2018 IPR029016 GAF domain-like CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 SUPERFAMILY SSF55781 70 250 3.89E-50 T 28-03-2018 IPR029016 GAF domain-like CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 Gene3D G3DSA:1.10.10.10 2 79 8.9E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 SMART SM00346 8 95 7.9E-21 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 Pfam PF01614 Bacterial transcriptional regulator 123 247 3.4E-34 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 SUPERFAMILY SSF46785 8 79 1.08E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01570 5aae0b8bf960e7b70936492db71b86b0 251 Pfam PF09339 IclR helix-turn-helix domain 10 59 1.3E-10 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS18080 8755db0bd6ce65ca5149d715460898a5 277 PIRSF PIRSF000477 1 276 1.5E-113 T 28-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CI104_RS18080 8755db0bd6ce65ca5149d715460898a5 277 TIGRFAM TIGR01699 XAPA: xanthosine phosphorylase 27 274 4.7E-152 T 28-03-2018 IPR010943 Xanthosine phosphorylase GO:0004731|GO:0005737|GO:0055086 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1 CI104_RS18080 8755db0bd6ce65ca5149d715460898a5 277 Gene3D G3DSA:3.40.50.1580 7 276 1.7E-56 T 28-03-2018 CI104_RS18080 8755db0bd6ce65ca5149d715460898a5 277 SUPERFAMILY SSF53167 9 276 5.42E-84 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS18080 8755db0bd6ce65ca5149d715460898a5 277 Pfam PF01048 Phosphorylase superfamily 28 273 3.2E-42 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS18080 8755db0bd6ce65ca5149d715460898a5 277 TIGRFAM TIGR01697 PNPH-PUNA-XAPA: inosine/guanosine/xanthosine phosphorylase family 27 272 3.8E-107 T 28-03-2018 IPR011268 Purine nucleoside phosphorylase GO:0004731|GO:0006139 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-6798695|Reactome: R-HSA-74217|Reactome: R-HSA-74259 CI104_RS06200 807af4e2ee20581dd1045c64737a3220 95 SUPERFAMILY SSF52794 4 88 5.89E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS06200 807af4e2ee20581dd1045c64737a3220 95 Gene3D G3DSA:3.40.50.2300 2 92 1.5E-14 T 28-03-2018 CI104_RS06200 807af4e2ee20581dd1045c64737a3220 95 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 71 5.5E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS27320 b854a892b40162ce5b6f2d128aee7d72 225 Pfam PF13817 IS66 C-terminal element 181 218 7.0E-17 T 28-03-2018 CI104_RS27320 b854a892b40162ce5b6f2d128aee7d72 225 Pfam PF03050 Transposase IS66 family 1 174 3.6E-59 T 28-03-2018 IPR004291 Transposase, IS66 CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 TIGRFAM TIGR00229 sensory_box: PAS domain S-box protein 115 233 2.7E-15 T 28-03-2018 IPR000014 PAS domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 SUPERFAMILY SSF55785 123 234 1.59E-17 T 28-03-2018 IPR000014 PAS domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 SUPERFAMILY SSF55073 243 397 9.42E-45 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 Pfam PF00990 Diguanylate cyclase, GGDEF domain 237 390 4.9E-45 T 28-03-2018 IPR000160 GGDEF domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 234 394 1.9E-35 T 28-03-2018 IPR000160 GGDEF domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 Pfam PF13426 PAS domain 123 225 2.8E-10 T 28-03-2018 IPR000014 PAS domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 SMART SM00267 226 395 3.2E-67 T 28-03-2018 IPR000160 GGDEF domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 SMART SM00052 405 649 3.4E-117 T 28-03-2018 IPR001633 EAL domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 Gene3D G3DSA:3.20.20.450 403 663 5.3E-88 T 28-03-2018 IPR001633 EAL domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 Pfam PF00563 EAL domain 412 644 4.7E-64 T 28-03-2018 IPR001633 EAL domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 Gene3D G3DSA:3.30.450.20 100 234 2.9E-20 T 28-03-2018 CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 Gene3D G3DSA:3.30.70.270 235 402 6.8E-56 T 28-03-2018 CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 SUPERFAMILY SSF141868 412 658 4.05E-81 T 28-03-2018 IPR001633 EAL domain CI104_RS14040 6618cadb4437f093ddf4a64ed74d7cfe 663 SMART SM00091 111 177 1.7E-6 T 28-03-2018 IPR000014 PAS domain CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 Pfam PF07969 Amidohydrolase family 52 536 1.2E-124 T 28-03-2018 IPR013108 Amidohydrolase 3 CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 SUPERFAMILY SSF51338 2 64 2.28E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 SUPERFAMILY SSF51338 495 545 2.28E-21 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 SUPERFAMILY SSF51556 63 125 1.09E-44 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 SUPERFAMILY SSF51556 205 496 1.09E-44 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 Gene3D G3DSA:2.30.40.10 6 115 4.7E-19 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 Gene3D G3DSA:3.20.20.140 189 474 8.4E-34 T 28-03-2018 CI104_RS06170 b257ab448e0bd7ed2b84b7907b8ad7fe 622 Gene3D G3DSA:2.30.40.10 475 541 5.0E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS01680 63084e13b0c394cc13b270b0abdb20f7 256 SUPERFAMILY SSF53474 4 254 2.1E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS01680 63084e13b0c394cc13b270b0abdb20f7 256 Gene3D G3DSA:3.40.50.1820 2 255 6.6E-51 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS01680 63084e13b0c394cc13b270b0abdb20f7 256 Pfam PF00561 alpha/beta hydrolase fold 15 242 2.1E-27 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS01680 63084e13b0c394cc13b270b0abdb20f7 256 TIGRFAM TIGR01738 bioH: pimelyl-[acyl-carrier protein] methyl ester esterase 10 252 1.5E-113 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CI104_RS01680 63084e13b0c394cc13b270b0abdb20f7 256 Hamap MF_01260 Pimeloyl-[acyl-carrier protein] methyl ester esterase [bioH]. 4 254 46.952 T 28-03-2018 IPR010076 Pimeloyl-[acyl-carrier protein] methyl ester esterase GO:0009102|GO:0052689 KEGG: 00780+3.1.1.85|MetaCyc: PWY-6519 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 Hamap MF_00020 Acetate kinase [ackA]. 1 396 183.075 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 Pfam PF00871 Acetokinase family 4 387 1.8E-150 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 SUPERFAMILY SSF53067 4 195 1.23E-67 T 28-03-2018 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PRINTS PR00471 Acetate kinase family signature 173 186 1.4E-42 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PRINTS PR00471 Acetate kinase family signature 5 16 1.4E-42 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PRINTS PR00471 Acetate kinase family signature 374 386 1.4E-42 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PRINTS PR00471 Acetate kinase family signature 203 224 1.4E-42 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PRINTS PR00471 Acetate kinase family signature 300 313 1.4E-42 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PRINTS PR00471 Acetate kinase family signature 322 338 1.4E-42 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 SUPERFAMILY SSF53067 157 392 5.18E-88 T 28-03-2018 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 203 220 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 Hamap MF_01882 Probable propionate kinase [pduW]. 1 392 72.61 T 28-03-2018 IPR024896 Propionate kinase PduW GO:0008980|GO:0019543|GO:0051144 KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 TIGRFAM TIGR00016 ackA: acetate kinase 2 392 1.0E-155 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 Gene3D G3DSA:3.30.420.40 4 195 1.2E-74 T 28-03-2018 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 5 16 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 Gene3D G3DSA:3.30.420.40 197 402 2.7E-79 T 28-03-2018 CI104_RS16280 13d785b9a4c9a3ef2820deaf7dd4ac8b 404 PIRSF PIRSF000722 1 397 3.5E-151 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS13835 17e3115f1d32a4d60384ae12e55d3213 86 Pfam PF10749 Protein of unknown function (DUF2534) 4 82 2.9E-40 T 28-03-2018 IPR019685 Protein of unknown function DUF2534 CI104_RS00305 f81c0c4a101721688c32c1b77a9f882b 249 Pfam PF03609 PTS system sorbose-specific iic component 7 238 3.0E-74 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS25710 d5f74c29e2bdfd94538a2c8bf56e4eec 111 Pfam PF00893 Small Multidrug Resistance protein 18 90 3.8E-24 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS25710 d5f74c29e2bdfd94538a2c8bf56e4eec 111 SUPERFAMILY SSF103481 7 103 6.15E-19 T 28-03-2018 CI104_RS25680 d5f74c29e2bdfd94538a2c8bf56e4eec 111 Pfam PF00893 Small Multidrug Resistance protein 18 90 3.8E-24 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS25680 d5f74c29e2bdfd94538a2c8bf56e4eec 111 SUPERFAMILY SSF103481 7 103 6.15E-19 T 28-03-2018 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 9 458 5.2E-191 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 Gene3D G3DSA:3.40.1670.10 326 462 2.3E-52 T 28-03-2018 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 Hamap MF_01636 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [ubiD]. 4 490 73.918 T 28-03-2018 IPR023677 UbiD decarboxylyase, bacteria GO:0005886|GO:0006744|GO:0008694 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 SUPERFAMILY SSF143968 326 489 1.7E-66 T 28-03-2018 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 SUPERFAMILY SSF50475 6 325 9.02E-130 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 Gene3D G3DSA:1.20.5.570 463 490 5.5E-19 T 28-03-2018 CI104_RS24665 116c4378b961a08fa867ed88a082f5f1 497 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 14 434 2.8E-174 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CI104_RS03280 daedbfe52f45f3e3ff00dbc55c88ef31 332 Gene3D G3DSA:3.40.50.720 1 147 2.8E-35 T 28-03-2018 CI104_RS03280 daedbfe52f45f3e3ff00dbc55c88ef31 332 SUPERFAMILY SSF51735 2 152 7.54E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS03280 daedbfe52f45f3e3ff00dbc55c88ef31 332 Gene3D G3DSA:3.30.360.10 148 325 5.0E-27 T 28-03-2018 CI104_RS03280 daedbfe52f45f3e3ff00dbc55c88ef31 332 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 2 118 1.2E-26 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS03280 daedbfe52f45f3e3ff00dbc55c88ef31 332 SUPERFAMILY SSF55347 127 290 1.31E-22 T 28-03-2018 CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 Gene3D G3DSA:3.30.230.30 7 133 3.3E-37 T 28-03-2018 IPR001498 Impact, N-terminal CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 SUPERFAMILY SSF54211 3 131 1.1E-41 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 SUPERFAMILY SSF54980 136 203 1.96E-18 T 28-03-2018 IPR035647 EF-G domain III/V-like CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 Pfam PF01205 Uncharacterized protein family UPF0029 18 125 8.3E-27 T 28-03-2018 IPR001498 Impact, N-terminal CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 Gene3D G3DSA:3.30.70.240 136 199 1.8E-20 T 28-03-2018 CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 ProSitePatterns PS00910 Uncharacterized protein family UPF0029 signature. 80 109 - T 28-03-2018 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 TIGRFAM TIGR00257 IMPACT_YIGZ: uncharacterized protein, YigZ family 1 204 2.4E-84 T 28-03-2018 IPR015796 Impact family, bacterial/archaeal CI104_RS24640 776c2429e469da1f1c093a69907d68c0 204 Pfam PF09186 Domain of unknown function (DUF1949) 141 195 4.8E-15 T 28-03-2018 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CI104_RS06805 b5112d50da0ecac39d0f84a1909b689a 343 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 16 329 1.1E-91 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CI104_RS06805 b5112d50da0ecac39d0f84a1909b689a 343 Pfam PF05125 Phage major capsid protein, P2 family 16 330 5.3E-97 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CI104_RS28560 970e5446d964ae0d303004614c009099 259 SUPERFAMILY SSF52540 71 243 6.52E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28560 970e5446d964ae0d303004614c009099 259 Pfam PF01695 IstB-like ATP binding protein 56 233 2.6E-62 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CI104_RS28560 970e5446d964ae0d303004614c009099 259 SMART SM00382 100 234 1.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS28560 970e5446d964ae0d303004614c009099 259 PIRSF PIRSF003073 1 256 2.6E-84 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CI104_RS28560 970e5446d964ae0d303004614c009099 259 Gene3D G3DSA:3.40.50.300 34 242 6.0E-16 T 28-03-2018 CI104_RS01890 2dfd9aea1819338c3a80c8347b32766a 200 Gene3D G3DSA:1.10.3290.10 21 195 1.1E-20 T 28-03-2018 IPR003812 Fido domain CI104_RS01890 2dfd9aea1819338c3a80c8347b32766a 200 Pfam PF02661 Fic/DOC family 58 152 9.3E-14 T 28-03-2018 IPR003812 Fido domain CI104_RS01890 2dfd9aea1819338c3a80c8347b32766a 200 SUPERFAMILY SSF140931 43 196 8.37E-28 T 28-03-2018 IPR003812 Fido domain CI104_RS22955 db6edd62c8da02f9efbbd9e1c1f764a5 239 PIRSF PIRSF006171 1 230 1.7E-82 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CI104_RS22955 db6edd62c8da02f9efbbd9e1c1f764a5 239 SMART SM00448 2 117 2.0E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS22955 db6edd62c8da02f9efbbd9e1c1f764a5 239 Pfam PF00072 Response regulator receiver domain 4 117 9.1E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS22955 db6edd62c8da02f9efbbd9e1c1f764a5 239 Gene3D G3DSA:3.40.50.2300 1 142 8.4E-26 T 28-03-2018 CI104_RS22955 db6edd62c8da02f9efbbd9e1c1f764a5 239 SUPERFAMILY SSF52172 1 138 3.42E-29 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS22955 db6edd62c8da02f9efbbd9e1c1f764a5 239 Gene3D G3DSA:1.10.10.10 143 235 1.3E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19595 ad5219dad438568950fcb0e5b6407950 354 Gene3D G3DSA:1.10.3720.10 135 336 2.6E-38 T 28-03-2018 CI104_RS19595 ad5219dad438568950fcb0e5b6407950 354 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 163 324 7.3E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS19595 ad5219dad438568950fcb0e5b6407950 354 SUPERFAMILY SSF161098 142 324 7.72E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 Gene3D G3DSA:3.30.70.20 107 143 6.6E-20 T 28-03-2018 CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 Pfam PF13247 4Fe-4S dicluster domain 85 180 6.4E-23 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 124 135 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 Gene3D G3DSA:3.30.70.20 50 106 1.5E-14 T 28-03-2018 CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 SUPERFAMILY SSF54862 36 215 3.45E-53 T 28-03-2018 CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 Gene3D G3DSA:3.30.70.20 144 212 1.3E-13 T 28-03-2018 CI104_RS12250 3c2c04ef065fd1310423d89c00e43575 222 Gene3D G3DSA:3.30.70.20 24 49 0.0031 T 28-03-2018 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 TIGRFAM TIGR00550 nadA: quinolinate synthetase complex, A subunit 23 342 3.9E-124 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 Pfam PF02445 Quinolinate synthetase A protein 31 340 4.2E-102 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 Gene3D G3DSA:3.40.50.10800 25 110 6.0E-18 T 28-03-2018 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 Hamap MF_00567 Quinolinate synthase A [nadA]. 1 347 71.133 T 28-03-2018 IPR023513 Quinolinate synthase A, type 1 GO:0016765 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 Gene3D G3DSA:3.40.50.10800 118 208 1.7E-18 T 28-03-2018 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 Gene3D G3DSA:3.40.50.10800 209 323 1.5E-30 T 28-03-2018 CI104_RS08125 90d92eeb2d1ed250c8ea4894580e4b7c 347 SUPERFAMILY SSF142754 29 341 6.93E-107 T 28-03-2018 IPR003473 Quinolinate synthetase A GO:0008987|GO:0009435|GO:0051539 MetaCyc: PWY-5316|MetaCyc: PWY-7342 CI104_RS23060 a56ec884ea1de6cf2ec4ecfb0a5eb5fe 148 Gene3D G3DSA:3.10.180.10 7 148 5.1E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS23060 a56ec884ea1de6cf2ec4ecfb0a5eb5fe 148 SUPERFAMILY SSF54593 1 142 9.32E-27 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS23060 a56ec884ea1de6cf2ec4ecfb0a5eb5fe 148 Pfam PF06983 3-demethylubiquinone-9 3-methyltransferase 5 138 1.3E-5 T 28-03-2018 IPR028973 PhnB-like CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 SUPERFAMILY SSF53850 24 332 3.06E-80 T 28-03-2018 CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 TIGRFAM TIGR00971 3a0106s03: sulfate ABC transporter, sulfate-binding protein 15 332 6.3E-183 T 28-03-2018 IPR005669 Thiosulphate/Sulfate-binding protein GO:0008272|GO:0015419 CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 Pfam PF13531 Bacterial extracellular solute-binding protein 40 286 4.8E-40 T 28-03-2018 CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 ProSitePatterns PS00757 Prokaryotic sulfate-binding proteins signature 2. 151 159 - T 28-03-2018 IPR034408 Sulphate/thiosulphate-binding site GO:1901681 CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 Gene3D G3DSA:3.40.190.10 24 132 8.9E-17 T 28-03-2018 CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 Gene3D G3DSA:3.40.190.10 133 258 4.3E-23 T 28-03-2018 CI104_RS18185 7717ab8c22d1a3ba3f0a52aebcadad0e 338 Gene3D G3DSA:3.40.190.10 259 335 7.0E-17 T 28-03-2018 CI104_RS18280 b279d1606a24454fb1b7109106244a2e 96 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 2 48 5.0E-18 T 28-03-2018 CI104_RS18280 b279d1606a24454fb1b7109106244a2e 96 SMART SM00877 2 78 2.2E-35 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18280 b279d1606a24454fb1b7109106244a2e 96 ProSitePatterns PS01139 Bacterial microcompartiments proteins signature. 20 39 - T 28-03-2018 IPR020808 Bacterial microcompartments protein, conserved site CI104_RS18280 b279d1606a24454fb1b7109106244a2e 96 Pfam PF00936 BMC domain 3 78 1.6E-27 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18280 b279d1606a24454fb1b7109106244a2e 96 SUPERFAMILY SSF143414 1 89 2.09E-31 T 28-03-2018 CI104_RS11760 cbfc09b5af220627583aaef8ba96bc56 511 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 349 496 2.2E-6 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS11760 cbfc09b5af220627583aaef8ba96bc56 511 SUPERFAMILY SSF161098 8 255 2.75E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS11760 cbfc09b5af220627583aaef8ba96bc56 511 Gene3D G3DSA:1.10.3720.10 1 266 4.4E-17 T 28-03-2018 CI104_RS11760 cbfc09b5af220627583aaef8ba96bc56 511 Gene3D G3DSA:1.10.3720.10 287 509 2.4E-13 T 28-03-2018 CI104_RS11760 cbfc09b5af220627583aaef8ba96bc56 511 SUPERFAMILY SSF161098 312 496 2.62E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 SUPERFAMILY SSF160240 231 292 4.32E-8 T 28-03-2018 CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 Hamap MF_00552 Zinc transporter ZitB [zitB]. 3 312 64.946 T 28-03-2018 IPR023500 Zinc transporter ZitB GO:0005385|GO:0006829|GO:0016020 CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 Gene3D G3DSA:3.30.70.1350 216 293 3.4E-10 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 Pfam PF01545 Cation efflux family 21 213 5.6E-51 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 18 293 2.7E-97 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 SUPERFAMILY SSF161111 16 214 3.92E-60 T 28-03-2018 CI104_RS08135 417557e9f54cc1e314768d12923b038d 313 Gene3D G3DSA:1.20.1510.10 17 213 1.2E-62 T 28-03-2018 CI104_RS22055 39812878541b045169c3b51b87e21465 334 Pfam PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain 158 330 4.0E-55 T 28-03-2018 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 SUPERFAMILY SSF53671 4 333 3.01E-99 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 TIGRFAM TIGR00658 orni_carb_tr: ornithine carbamoyltransferase 8 332 2.9E-132 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 53 72 7.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 297 320 7.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 268 277 7.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00100 Aspartate/ornithine carbamoyltransferase superfamily signature 135 146 7.9E-26 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 ProSitePatterns PS00097 Aspartate and ornithine carbamoyltransferases signature. 53 60 - T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 Gene3D G3DSA:3.40.50.1370 148 319 6.1E-53 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 Pfam PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain 8 148 1.9E-46 T 28-03-2018 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding GO:0006520|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 311 322 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 84 97 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 124 138 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 230 240 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22055 39812878541b045169c3b51b87e21465 334 PRINTS PR00102 Ornithine carbamoyltransferase signature 51 65 3.9E-32 T 28-03-2018 IPR002292 Ornithine/putrescine carbamoyltransferase GO:0016743 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400|Reactome: R-HSA-70635 CI104_RS22055 39812878541b045169c3b51b87e21465 334 Gene3D G3DSA:3.40.50.1370 1 147 2.5E-54 T 28-03-2018 IPR006130 Aspartate/ornithine carbamoyltransferase GO:0006520|GO:0016597|GO:0016743 CI104_RS22055 39812878541b045169c3b51b87e21465 334 Hamap MF_01109 Ornithine carbamoyltransferase, catabolic [argI]. 7 333 82.933 T 28-03-2018 IPR024904 Ornithine carbamoyltransferase GO:0004585|GO:0006591 KEGG: 00220+2.1.3.3|MetaCyc: PWY-4981|MetaCyc: PWY-4984|MetaCyc: PWY-7400 CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 TIGRFAM TIGR03243 arg_catab_AOST: arginine and ornithine succinyltransferase subunits 3 337 3.4E-152 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 SUPERFAMILY SSF55729 1 337 9.61E-135 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 Gene3D G3DSA:3.40.630.30 1 273 8.1E-28 T 28-03-2018 CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 Gene3D G3DSA:2.40.40.20 274 337 9.4E-20 T 28-03-2018 CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 TIGRFAM TIGR03244 arg_catab_AstA: arginine N-succinyltransferase 3 337 4.1E-164 T 28-03-2018 IPR017650 Arginine N-succinyltransferase GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 Hamap MF_01171 Arginine N-succinyltransferase [astA]. 1 343 71.671 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CI104_RS11785 a10587859a6a2d5e139d00160d9030ea 344 Pfam PF04958 Arginine N-succinyltransferase beta subunit 1 335 4.6E-146 T 28-03-2018 IPR007041 Arginine N-succinyltransferase AstA/AruG GO:0006527|GO:0008791 KEGG: 00330+2.3.1.109 CI104_RS19905 38da3a96284d4b809898b7b66ea1afe0 475 Pfam PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 10 416 1.6E-106 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CI104_RS19905 38da3a96284d4b809898b7b66ea1afe0 475 SUPERFAMILY SSF50475 3 309 5.89E-83 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS19905 38da3a96284d4b809898b7b66ea1afe0 475 Hamap MF_01985 Phenolic acid decarboxylase subunit C. 1 472 71.193 T 28-03-2018 IPR032902 Phenolic acid decarboxylase subunit C GO:0016831 KEGG: 00627+4.1.1.61 CI104_RS19905 38da3a96284d4b809898b7b66ea1afe0 475 TIGRFAM TIGR00148 TIGR00148: decarboxylase, UbiD family 6 441 2.1E-127 T 28-03-2018 IPR002830 UbiD decarboxylyase family GO:0016831 KEGG: 00130+4.1.1.98|MetaCyc: PWY-5855|MetaCyc: PWY-5856|MetaCyc: PWY-5857|MetaCyc: PWY-6708|MetaCyc: PWY-6978 CI104_RS19905 38da3a96284d4b809898b7b66ea1afe0 475 Gene3D G3DSA:3.40.1670.10 311 453 1.3E-32 T 28-03-2018 CI104_RS19905 38da3a96284d4b809898b7b66ea1afe0 475 SUPERFAMILY SSF143968 312 467 2.48E-41 T 28-03-2018 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 Gene3D G3DSA:3.30.70.260 138 196 3.8E-24 T 28-03-2018 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 Pfam PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) 49 213 4.7E-60 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 TIGRFAM TIGR00021 rpiA: ribose 5-phosphate isomerase A 6 215 1.1E-72 T 28-03-2018 IPR004788 Ribose 5-phosphate isomerase, type A GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 Gene3D G3DSA:3.40.50.1360 1 137 5.7E-40 T 28-03-2018 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 SUPERFAMILY SSF100950 1 146 2.05E-46 T 28-03-2018 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 SUPERFAMILY SSF75445 127 198 3.27E-24 T 28-03-2018 CI104_RS21125 784f4d4805c9a03c5c72bba7b81dd272 219 Hamap MF_00170 Ribose-5-phosphate isomerase A [rpiA]. 3 217 34.919 T 28-03-2018 IPR020672 Ribose-5-phosphate isomerase, type A, subgroup GO:0004751|GO:0009052 KEGG: 00030+5.3.1.6|KEGG: 00051+5.3.1.6|KEGG: 00710+5.3.1.6|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS04135 98372dd4184b58f5eef7b38b6af998c1 360 Pfam PF11873 Domain of unknown function (DUF3393) 3 192 2.2E-74 T 28-03-2018 IPR024570 Murein transglycosylase-C, N-terminal CI104_RS04135 98372dd4184b58f5eef7b38b6af998c1 360 Pfam PF01464 Transglycosylase SLT domain 196 319 6.9E-33 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS04135 98372dd4184b58f5eef7b38b6af998c1 360 Hamap MF_01616 Membrane-bound lytic murein transglycosylase C [mltC]. 1 359 64.777 T 28-03-2018 IPR023664 Murein transglycosylase-C GO:0009279|GO:0016798|GO:0016998 CI104_RS04135 98372dd4184b58f5eef7b38b6af998c1 360 Gene3D G3DSA:1.10.530.10 183 357 3.4E-35 T 28-03-2018 CI104_RS04135 98372dd4184b58f5eef7b38b6af998c1 360 SUPERFAMILY SSF53955 192 358 8.16E-37 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS04135 98372dd4184b58f5eef7b38b6af998c1 360 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 214 242 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CI104_RS21360 5adc5824a7d8ce30318b209405b4f017 171 Pfam PF00583 Acetyltransferase (GNAT) family 44 134 8.5E-12 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS21360 5adc5824a7d8ce30318b209405b4f017 171 Gene3D G3DSA:3.40.630.30 1 84 5.1E-12 T 28-03-2018 CI104_RS21360 5adc5824a7d8ce30318b209405b4f017 171 SUPERFAMILY SSF55729 1 139 8.61E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS21360 5adc5824a7d8ce30318b209405b4f017 171 Gene3D G3DSA:3.40.630.30 85 141 1.0E-11 T 28-03-2018 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 SUPERFAMILY SSF51445 3 470 2.67E-164 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 370 378 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 438 450 3.5E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 413 430 3.5E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 391 402 3.5E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 304 318 3.5E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 PRINTS PR00131 Glycosyl hydrolase family 1 signature 370 378 3.5E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 8 22 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 Gene3D G3DSA:3.20.20.80 1 476 2.8E-155 T 28-03-2018 CI104_RS18465 3e222694e9aad7049b3c07d8e6ff1952 476 Pfam PF00232 Glycosyl hydrolase family 1 4 473 1.4E-132 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS01800 07e34139de1d0f891d9f58ad2cfa6e79 424 Pfam PF05036 Sporulation related domain 341 413 2.5E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS01800 07e34139de1d0f891d9f58ad2cfa6e79 424 Gene3D G3DSA:3.30.70.1070 343 407 2.7E-4 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS01800 07e34139de1d0f891d9f58ad2cfa6e79 424 SUPERFAMILY SSF110997 340 404 6.28E-7 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS01800 07e34139de1d0f891d9f58ad2cfa6e79 424 Hamap MF_02021 Cell division protein DamX [damX]. 1 424 25.614 T 28-03-2018 IPR032899 Cell division protein DamX GO:0030428|GO:0032506 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 Gene3D G3DSA:3.60.21.10 26 362 4.4E-81 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 Gene3D G3DSA:3.90.780.10 363 549 2.5E-47 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 SUPERFAMILY SSF55816 363 541 1.1E-52 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 PRINTS PR01607 Apyrase family signature 238 261 4.5E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 PRINTS PR01607 Apyrase family signature 417 440 4.5E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 PRINTS PR01607 Apyrase family signature 32 50 4.5E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 PRINTS PR01607 Apyrase family signature 207 224 4.5E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 PRINTS PR01607 Apyrase family signature 283 303 4.5E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 PRINTS PR01607 Apyrase family signature 484 503 4.5E-62 T 28-03-2018 IPR006179 5'-Nucleotidase/apyrase GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 Pfam PF00149 Calcineurin-like phosphoesterase 35 254 7.4E-17 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 ProSitePatterns PS00785 5'-nucleotidase signature 1. 34 46 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 SUPERFAMILY SSF56300 28 361 1.66E-94 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 ProSitePatterns PS00786 5'-nucleotidase signature 2. 109 120 - T 28-03-2018 IPR006146 5'-Nucleotidase, conserved site GO:0000166|GO:0016788|GO:0046872 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS06680 aa2462732ddd4b4e6a4ae6c43783a97b 550 Pfam PF02872 5'-nucleotidase, C-terminal domain 363 507 1.1E-31 T 28-03-2018 IPR008334 5'-Nucleotidase, C-terminal GO:0009166|GO:0016787 Reactome: R-HSA-196807|Reactome: R-HSA-73621|Reactome: R-HSA-74259 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 Pfam PF08220 DeoR-like helix-turn-helix domain 8 56 8.1E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 SMART SM01134 76 237 1.4E-37 T 28-03-2018 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 SUPERFAMILY SSF100950 85 237 4.4E-12 T 28-03-2018 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 ProSitePatterns PS00894 DeoR-type HTH domain signature. 8 42 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 Gene3D G3DSA:1.10.10.10 1 77 6.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 Gene3D G3DSA:3.40.50.1360 79 247 5.5E-16 T 28-03-2018 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 SMART SM00420 8 59 7.5E-4 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS00175 675c78f4fb37dc53a0b214cfac4a9405 261 Pfam PF00455 DeoR C terminal sensor domain 85 236 1.3E-28 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS09040 21c0fc09d01f67f7e5a227a659ea8559 227 TIGRFAM TIGR00017 cmk: cytidylate kinase 6 219 7.5E-97 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CI104_RS09040 21c0fc09d01f67f7e5a227a659ea8559 227 SUPERFAMILY SSF52540 6 224 4.69E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09040 21c0fc09d01f67f7e5a227a659ea8559 227 Gene3D G3DSA:3.40.50.300 5 224 9.5E-53 T 28-03-2018 CI104_RS09040 21c0fc09d01f67f7e5a227a659ea8559 227 Hamap MF_00238 Cytidylate kinase [cmk]. 6 224 34.6 T 28-03-2018 IPR003136 Cytidylate kinase GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CI104_RS09040 21c0fc09d01f67f7e5a227a659ea8559 227 Pfam PF02224 Cytidylate kinase 8 221 3.5E-85 T 28-03-2018 IPR011994 Cytidylate kinase domain GO:0004127|GO:0005524|GO:0006139 KEGG: 00240+2.7.4.25|MetaCyc: PWY-7205 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 3.3E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 3.3E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 Gene3D G3DSA:3.40.1410.10 75 243 3.5E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 Gene3D G3DSA:1.10.10.10 2 74 1.8E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 SUPERFAMILY SSF64288 63 242 1.88E-39 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 SMART SM00866 96 235 1.6E-28 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 5.8E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 SMART SM00345 16 75 1.8E-24 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 Pfam PF07702 UTRA domain 97 234 6.3E-31 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS01825 ceb6080763091d97b40cddaa015a8cfd 243 SUPERFAMILY SSF46785 5 80 1.72E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07585 41d3323897b19702f5ede3f1cc5c33b0 241 Gene3D G3DSA:3.40.50.300 1 241 5.4E-74 T 28-03-2018 CI104_RS07585 41d3323897b19702f5ede3f1cc5c33b0 241 PIRSF PIRSF039085 1 241 1.5E-107 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS07585 41d3323897b19702f5ede3f1cc5c33b0 241 SUPERFAMILY SSF52540 1 235 3.17E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07585 41d3323897b19702f5ede3f1cc5c33b0 241 Pfam PF00005 ABC transporter 17 165 8.0E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS07585 41d3323897b19702f5ede3f1cc5c33b0 241 SMART SM00382 26 213 3.0E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS07585 41d3323897b19702f5ede3f1cc5c33b0 241 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS15650 217b6a1f507c5b77a6cf0833d003f331 221 SUPERFAMILY SSF101327 14 182 1.96E-22 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS15650 217b6a1f507c5b77a6cf0833d003f331 221 SUPERFAMILY SSF103642 200 220 5.07E-8 T 28-03-2018 CI104_RS15650 217b6a1f507c5b77a6cf0833d003f331 221 Pfam PF03695 Uncharacterised protein family (UPF0149) 12 183 8.1E-35 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS15650 217b6a1f507c5b77a6cf0833d003f331 221 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 10 182 1.8E-49 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS15650 217b6a1f507c5b77a6cf0833d003f331 221 Gene3D G3DSA:3.10.450.50 137 221 8.8E-15 T 28-03-2018 CI104_RS15650 217b6a1f507c5b77a6cf0833d003f331 221 Pfam PF02810 SEC-C motif 203 220 1.3E-10 T 28-03-2018 IPR004027 SEC-C motif CI104_RS19400 c61919744425b4d9be4fc7562fedc823 291 Gene3D G3DSA:3.20.20.360 2 263 3.5E-47 T 28-03-2018 CI104_RS19400 c61919744425b4d9be4fc7562fedc823 291 SUPERFAMILY SSF51621 3 236 1.43E-57 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS19400 c61919744425b4d9be4fc7562fedc823 291 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 3 289 8.8E-141 T 28-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CI104_RS19400 c61919744425b4d9be4fc7562fedc823 291 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 6 224 4.8E-74 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CI104_RS19400 c61919744425b4d9be4fc7562fedc823 291 PIRSF PIRSF015582 1 291 3.6E-76 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 Gene3D G3DSA:3.40.190.10 175 265 2.7E-23 T 28-03-2018 CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 SUPERFAMILY SSF53850 90 289 3.95E-41 T 28-03-2018 CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 SUPERFAMILY SSF46785 1 86 8.84E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 Gene3D G3DSA:3.40.190.10 89 174 2.8E-15 T 28-03-2018 CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 Pfam PF03466 LysR substrate binding domain 90 287 1.6E-42 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 Gene3D G3DSA:1.10.10.10 1 83 6.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.6E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS23240 d931750d0651a42b434ce6b426a68176 297 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 1.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 Gene3D G3DSA:1.10.10.10 3 76 4.2E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 SMART SM00345 15 74 1.6E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 6.3E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 6.3E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 SUPERFAMILY SSF46785 6 78 2.61E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 1.1E-15 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 Pfam PF07729 FCD domain 100 218 1.2E-20 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 SMART SM00895 100 222 5.0E-12 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 Gene3D G3DSA:1.20.120.530 93 234 5.0E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS12990 e71f1d4addf90e239379ceffdc850142 239 SUPERFAMILY SSF48008 96 219 6.8E-23 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS01995 2fbf1d975bccdd215074629a7c3ad02a 95 Gene3D G3DSA:3.40.1260.10 1 93 3.7E-22 T 28-03-2018 CI104_RS01995 2fbf1d975bccdd215074629a7c3ad02a 95 TIGRFAM TIGR03011 sulf_tusB_dsrH: sulfur relay protein TusB/DsrH 2 95 3.5E-33 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CI104_RS01995 2fbf1d975bccdd215074629a7c3ad02a 95 Hamap MF_01564 Protein TusB [tusB]. 1 95 29.907 T 28-03-2018 IPR023526 Sulphur relay, TusB GO:0002143|GO:0005737 CI104_RS01995 2fbf1d975bccdd215074629a7c3ad02a 95 Pfam PF04077 DsrH like protein 8 91 3.5E-29 T 28-03-2018 IPR007215 Sulphur relay, TusB/DsrH GO:0002143|GO:0005737 CI104_RS01995 2fbf1d975bccdd215074629a7c3ad02a 95 SUPERFAMILY SSF75169 1 95 1.47E-30 T 28-03-2018 IPR027396 DsrEFH-like CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 289 326 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 Pfam PF00202 Aminotransferase class-III 95 470 1.1E-102 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 Gene3D G3DSA:3.90.1150.10 361 473 1.7E-26 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 TIGRFAM TIGR03372 putres_am_tran: putrescine aminotransferase 29 470 1.1E-291 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 Hamap MF_01276 Putrescine aminotransferase [patA]. 22 480 89.083 T 28-03-2018 IPR017747 Putrescine aminotransferase GO:0009447|GO:0030170|GO:0033094 KEGG: 00330+2.6.1.82|MetaCyc: PWY-2|MetaCyc: PWY-6440 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 Gene3D G3DSA:3.40.640.10 112 360 3.6E-84 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 SUPERFAMILY SSF53383 95 471 4.87E-119 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 PIRSF PIRSF000521 76 197 2.2E-4 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS03360 dc8a11bc90cb2fd643d441ea6f012bbc 480 PIRSF PIRSF000521 186 473 6.6E-43 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 TIGRFAM TIGR00184 purA: adenylosuccinate synthase 6 430 1.9E-207 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 SMART SM00788 4 425 3.8E-302 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 ProSitePatterns PS01266 Adenylosuccinate synthetase GTP-binding site. 11 18 - T 28-03-2018 IPR018220 Adenylosuccinate synthase, GTP-binding site GO:0005525 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 Gene3D G3DSA:3.40.440.10 152 266 2.6E-27 T 28-03-2018 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 Gene3D G3DSA:3.40.440.10 1 151 7.8E-54 T 28-03-2018 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 Gene3D G3DSA:3.90.170.10 267 432 2.3E-66 T 28-03-2018 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 SUPERFAMILY SSF52540 3 431 1.81E-180 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 Hamap MF_00011 Adenylosuccinate synthetase [purA]. 1 432 218.325 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 Pfam PF00709 Adenylosuccinate synthetase 5 423 5.5E-178 T 28-03-2018 IPR001114 Adenylosuccinate synthetase GO:0004019|GO:0005525|GO:0006164 KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CI104_RS22510 599d77a52fab25131dc332a80d6eb154 432 ProSitePatterns PS00513 Adenylosuccinate synthetase active site. 133 144 - T 28-03-2018 IPR033128 Adenylosuccinate synthase, active site KEGG: 00230+6.3.4.4|KEGG: 00250+6.3.4.4|MetaCyc: PWY-7219|Reactome: R-HSA-73817 CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 Hamap MF_01007 Ribosomal RNA small subunit methyltransferase H [rsmH]. 7 311 39.286 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 Gene3D G3DSA:1.10.150.170 112 215 2.7E-37 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 Pfam PF01795 MraW methylase family 4 310 1.2E-122 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 SUPERFAMILY SSF53335 7 113 2.57E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 SUPERFAMILY SSF53335 213 310 2.57E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 TIGRFAM TIGR00006 TIGR00006: 16S rRNA (cytosine(1402)-N(4))-methyltransferase 1 310 2.8E-134 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 PIRSF PIRSF004486 1 312 5.9E-104 T 28-03-2018 IPR002903 Ribosomal RNA small subunit methyltransferase H GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS04860 4f542090c6e0b5178d2a98bb1f61cf5e 313 SUPERFAMILY SSF81799 114 213 1.96E-35 T 28-03-2018 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain GO:0008168 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 TIGRFAM TIGR00700 GABAtrnsam: 4-aminobutyrate transaminase 9 419 2.1E-192 T 28-03-2018 IPR004632 4-aminobutyrate aminotransferase, bacterial GO:0003867|GO:0009448 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 Pfam PF00202 Aminotransferase class-III 24 418 2.0E-128 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 PIRSF PIRSF000521 125 421 1.9E-42 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 PIRSF PIRSF000521 10 129 2.3E-4 T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 SUPERFAMILY SSF53383 24 419 2.55E-130 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 Gene3D G3DSA:3.40.640.10 183 305 4.4E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 Gene3D G3DSA:3.90.1150.10 306 421 1.0E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 ProSitePatterns PS00600 Aminotransferases class-III pyridoxal-phosphate attachment site. 235 272 - T 28-03-2018 IPR005814 Aminotransferase class-III GO:0008483|GO:0030170 CI104_RS01420 f766d6078a727c65d9ec74ce9e1ddcc3 421 Gene3D G3DSA:3.90.1150.10 22 182 1.9E-38 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 TIGRFAM TIGR00877 purD: phosphoribosylamine--glycine ligase 1 425 1.5E-188 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Hamap MF_00138 Phosphoribosylamine--glycine ligase [purD]. 1 424 43.833 T 28-03-2018 IPR000115 Phosphoribosylglycinamide synthetase GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 SMART SM01209 103 296 1.5E-141 T 28-03-2018 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Gene3D G3DSA:3.30.1490.20 135 189 4.6E-23 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 SUPERFAMILY SSF51246 329 424 1.96E-33 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 SUPERFAMILY SSF56059 104 323 1.04E-69 T 28-03-2018 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Gene3D G3DSA:3.30.470.20 191 329 4.9E-62 T 28-03-2018 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Pfam PF02843 Phosphoribosylglycinamide synthetase, C domain 332 422 5.8E-30 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 SMART SM01210 330 424 7.8E-57 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 ProSitePatterns PS00184 Phosphoribosylglycinamide synthetase signature. 290 297 - T 28-03-2018 IPR020559 Phosphoribosylglycinamide synthetase, conserved site GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Gene3D G3DSA:3.90.600.10 330 425 9.8E-35 T 28-03-2018 IPR020560 Phosphoribosylglycinamide synthetase, C-domain GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Pfam PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain 103 296 3.4E-83 T 28-03-2018 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 SUPERFAMILY SSF52440 1 103 2.01E-37 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Pfam PF02844 Phosphoribosylglycinamide synthetase, N domain 1 102 2.4E-36 T 28-03-2018 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal GO:0004637|GO:0009113 KEGG: 00230+6.3.4.13|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS23660 961714e495706108c0b46c84f44859ac 429 Gene3D G3DSA:3.40.50.20 2 95 9.0E-39 T 28-03-2018 CI104_RS10105 b55c7dee5ab427125945fb6c96bd85f1 459 Pfam PF10080 Predicted membrane protein (DUF2318) 298 400 3.0E-28 T 28-03-2018 IPR018758 Domain of unknown function DUF2318, membrane CI104_RS10105 b55c7dee5ab427125945fb6c96bd85f1 459 Gene3D G3DSA:1.10.620.20 384 459 2.0E-7 T 28-03-2018 CI104_RS10105 b55c7dee5ab427125945fb6c96bd85f1 459 Pfam PF04945 YHS domain 408 454 1.5E-15 T 28-03-2018 IPR007029 YHS domain CI104_RS14465 e65b87a6902e584b2f6a0efdc11e3ab0 559 Pfam PF00916 Sulfate permease family 29 412 1.3E-76 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CI104_RS14465 e65b87a6902e584b2f6a0efdc11e3ab0 559 ProSitePatterns PS01130 SLC26A transporters signature. 58 79 - T 28-03-2018 IPR018045 Sulphate anion transporter, conserved site GO:0008271|GO:0008272 Reactome: R-HSA-427601 CI104_RS14465 e65b87a6902e584b2f6a0efdc11e3ab0 559 Pfam PF01740 STAS domain 451 554 5.8E-13 T 28-03-2018 IPR002645 STAS domain CI104_RS14465 e65b87a6902e584b2f6a0efdc11e3ab0 559 TIGRFAM TIGR00815 sulP: sulfate permease 18 555 2.3E-147 T 28-03-2018 IPR001902 SLC26A/SulP transporter GO:0008271|GO:0008272|GO:0016020|GO:0055085 CI104_RS14465 e65b87a6902e584b2f6a0efdc11e3ab0 559 SUPERFAMILY SSF52091 451 557 2.75E-15 T 28-03-2018 IPR002645 STAS domain CI104_RS14465 e65b87a6902e584b2f6a0efdc11e3ab0 559 Gene3D G3DSA:3.30.750.24 442 559 8.8E-16 T 28-03-2018 IPR002645 STAS domain CI104_RS20700 c3159a9940967fca9777385fbf85abe9 833 Pfam PF00577 Outer membrane usher protein 194 750 2.5E-191 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS20700 c3159a9940967fca9777385fbf85abe9 833 Pfam PF13954 PapC N-terminal domain 34 179 9.5E-40 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS20700 c3159a9940967fca9777385fbf85abe9 833 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 305 315 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CI104_RS20700 c3159a9940967fca9777385fbf85abe9 833 Pfam PF13953 PapC C-terminal domain 763 818 1.8E-11 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS20700 c3159a9940967fca9777385fbf85abe9 833 SUPERFAMILY SSF141729 60 170 1.31E-26 T 28-03-2018 CI104_RS14195 ee4d6bd017393b72e1eb4cab1702c9e4 488 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 343 486 4.4E-34 T 28-03-2018 IPR000160 GGDEF domain CI104_RS14195 ee4d6bd017393b72e1eb4cab1702c9e4 488 SMART SM00267 332 487 2.1E-29 T 28-03-2018 IPR000160 GGDEF domain CI104_RS14195 ee4d6bd017393b72e1eb4cab1702c9e4 488 Gene3D G3DSA:3.30.70.270 339 488 1.7E-35 T 28-03-2018 CI104_RS14195 ee4d6bd017393b72e1eb4cab1702c9e4 488 Pfam PF00990 Diguanylate cyclase, GGDEF domain 343 487 9.7E-32 T 28-03-2018 IPR000160 GGDEF domain CI104_RS14195 ee4d6bd017393b72e1eb4cab1702c9e4 488 SUPERFAMILY SSF55073 347 487 2.55E-32 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS23165 833d7ba1cd1976034a5cb8e89b6704f1 135 Pfam PF03918 Cytochrome C biogenesis protein 9 133 3.6E-44 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CI104_RS23165 833d7ba1cd1976034a5cb8e89b6704f1 135 TIGRFAM TIGR03147 cyt_nit_nrfF: cytochrome c nitrite reductase, accessory protein NrfF 5 127 3.7E-58 T 28-03-2018 IPR017565 Formate-dependent nitrite reductase complex, subunit NrfF CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 Pfam PF00990 Diguanylate cyclase, GGDEF domain 356 506 2.7E-33 T 28-03-2018 IPR000160 GGDEF domain CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 Gene3D G3DSA:3.30.450.20 177 285 3.6E-14 T 28-03-2018 CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 354 509 1.2E-33 T 28-03-2018 IPR000160 GGDEF domain CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 Pfam PF02743 Cache domain 57 272 4.5E-22 T 28-03-2018 IPR033479 Double Cache domain 1 CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 SUPERFAMILY SSF55073 361 509 3.06E-35 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 SMART SM00267 343 510 5.4E-37 T 28-03-2018 IPR000160 GGDEF domain CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 Gene3D G3DSA:3.30.450.20 59 176 6.1E-13 T 28-03-2018 CI104_RS23745 dcfc0c042bf3bde57c5ca054be818072 512 Gene3D G3DSA:3.30.70.270 339 511 3.4E-43 T 28-03-2018 CI104_RS17010 d146efe2f202c6a8dfa48363a67dabdc 189 Pfam PF00877 NlpC/P60 family 80 184 1.2E-33 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CI104_RS17010 d146efe2f202c6a8dfa48363a67dabdc 189 Gene3D G3DSA:3.90.1720.10 64 189 1.2E-39 T 28-03-2018 CI104_RS17010 d146efe2f202c6a8dfa48363a67dabdc 189 SUPERFAMILY SSF54001 68 186 2.31E-40 T 28-03-2018 CI104_RS06075 2967f55d42c02a27f9d9900711871650 366 Gene3D G3DSA:3.30.70.270 188 366 4.3E-47 T 28-03-2018 CI104_RS06075 2967f55d42c02a27f9d9900711871650 366 Pfam PF00990 Diguanylate cyclase, GGDEF domain 206 361 1.7E-42 T 28-03-2018 IPR000160 GGDEF domain CI104_RS06075 2967f55d42c02a27f9d9900711871650 366 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 201 365 3.6E-59 T 28-03-2018 IPR000160 GGDEF domain CI104_RS06075 2967f55d42c02a27f9d9900711871650 366 SUPERFAMILY SSF55073 210 363 1.1E-42 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS06075 2967f55d42c02a27f9d9900711871650 366 SMART SM00267 194 365 7.9E-57 T 28-03-2018 IPR000160 GGDEF domain CI104_RS06075 2967f55d42c02a27f9d9900711871650 366 Pfam PF05230 MASE2 domain 35 123 2.5E-26 T 28-03-2018 IPR007894 MASE2 CI104_RS15950 d4b1846f901d69384bd54a2180a3ccd7 155 TIGRFAM TIGR00632 vsr: DNA mismatch endonuclease Vsr 1 118 1.6E-52 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CI104_RS15950 d4b1846f901d69384bd54a2180a3ccd7 155 Gene3D G3DSA:3.40.960.10 21 155 4.3E-31 T 28-03-2018 CI104_RS15950 d4b1846f901d69384bd54a2180a3ccd7 155 Pfam PF03852 DNA mismatch endonuclease Vsr 2 74 2.2E-37 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CI104_RS15950 d4b1846f901d69384bd54a2180a3ccd7 155 PIRSF PIRSF018267 1 148 3.8E-50 T 28-03-2018 IPR004603 DNA mismatch endonuclease vsr GO:0004519|GO:0006298 CI104_RS15950 d4b1846f901d69384bd54a2180a3ccd7 155 SUPERFAMILY SSF52980 2 153 2.09E-51 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS17125 a1a4a11e8adb2c0899817a586a0ab152 159 Gene3D G3DSA:2.40.50.140 27 131 6.3E-33 T 28-03-2018 CI104_RS17125 a1a4a11e8adb2c0899817a586a0ab152 159 SUPERFAMILY SSF82093 30 143 3.01E-40 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CI104_RS17125 a1a4a11e8adb2c0899817a586a0ab152 159 Pfam PF03100 CcmE 4 137 1.8E-45 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CI104_RS17125 a1a4a11e8adb2c0899817a586a0ab152 159 Hamap MF_01959 Cytochrome c-type biogenesis protein CcmE [ccmE]. 2 147 31.364 T 28-03-2018 IPR004329 CcmE/CycJ protein GO:0005886|GO:0017003|GO:0017004 CI104_RS06500 eb17b94c7facfbb27e10b77aa4fb60ab 286 Gene3D G3DSA:3.10.129.10 131 286 6.4E-53 T 28-03-2018 CI104_RS06500 eb17b94c7facfbb27e10b77aa4fb60ab 286 Gene3D G3DSA:3.10.129.10 2 116 4.0E-44 T 28-03-2018 CI104_RS06500 eb17b94c7facfbb27e10b77aa4fb60ab 286 Pfam PF13622 Thioesterase-like superfamily 33 282 2.1E-57 T 28-03-2018 CI104_RS06500 eb17b94c7facfbb27e10b77aa4fb60ab 286 TIGRFAM TIGR00189 tesB: acyl-CoA thioesterase II 12 283 9.2E-103 T 28-03-2018 IPR003703 Acyl-CoA thioesterase GO:0006637|GO:0047617 Reactome: R-HSA-193368|Reactome: R-HSA-2046106|Reactome: R-HSA-389887|Reactome: R-HSA-390247 CI104_RS06500 eb17b94c7facfbb27e10b77aa4fb60ab 286 SUPERFAMILY SSF54637 5 114 2.72E-42 T 28-03-2018 IPR029069 HotDog domain CI104_RS06500 eb17b94c7facfbb27e10b77aa4fb60ab 286 SUPERFAMILY SSF54637 116 284 2.44E-58 T 28-03-2018 IPR029069 HotDog domain CI104_RS14650 c7e10a8b0d60fb187e43a169616840d1 176 Gene3D G3DSA:1.20.1550.10 1 176 2.3E-55 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CI104_RS14650 c7e10a8b0d60fb187e43a169616840d1 176 Pfam PF02600 Disulfide bond formation protein DsbB 12 159 2.0E-46 T 28-03-2018 IPR003752 Disulphide bond formation protein DsbB/BdbC GO:0015035|GO:0016020 CI104_RS14650 c7e10a8b0d60fb187e43a169616840d1 176 SUPERFAMILY SSF158442 15 161 3.53E-46 T 28-03-2018 IPR023380 Disulphide bond formation protein DsbB-like domain CI104_RS14650 c7e10a8b0d60fb187e43a169616840d1 176 Hamap MF_00286 Disulfide bond formation protein B [dsbB]. 7 167 22.625 T 28-03-2018 IPR022920 Disulphide bond formation protein DsbB CI104_RS20265 27d1d6409b73da9d908d93e7f7ba842e 148 TIGRFAM TIGR03391 FeS_syn_CsdE: cysteine desulfurase, sulfur acceptor subunit CsdE 7 144 1.4E-69 T 28-03-2018 IPR017763 Cysteine desulfurase, sulphur acceptor subunit CsdE CI104_RS20265 27d1d6409b73da9d908d93e7f7ba842e 148 Pfam PF02657 Fe-S metabolism associated domain 23 138 5.4E-36 T 28-03-2018 IPR003808 Fe-S metabolism associated domain, SufE-like CI104_RS20265 27d1d6409b73da9d908d93e7f7ba842e 148 Gene3D G3DSA:3.90.1010.10 1 147 5.8E-42 T 28-03-2018 CI104_RS20265 27d1d6409b73da9d908d93e7f7ba842e 148 SUPERFAMILY SSF82649 3 144 5.75E-41 T 28-03-2018 CI104_RS08335 c3f9144336289f8c14bf4207be7e7991 320 Pfam PF03706 Lysylphosphatidylglycerol synthase TM region 21 295 1.2E-16 T 28-03-2018 IPR022791 Lysylphosphatidylglycerol synthetase/glycosyltransferase AglD CI104_RS27860 481428eb2ba301d5bb6e5914ce7d949a 669 SUPERFAMILY SSF110849 37 135 5.41E-13 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS27860 481428eb2ba301d5bb6e5914ce7d949a 669 Gene3D G3DSA:1.10.10.730 134 180 7.8E-8 T 28-03-2018 CI104_RS27860 481428eb2ba301d5bb6e5914ce7d949a 669 Gene3D G3DSA:3.90.1530.10 25 133 5.8E-18 T 28-03-2018 CI104_RS27860 481428eb2ba301d5bb6e5914ce7d949a 669 SMART SM00470 37 133 1.7E-22 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS27860 481428eb2ba301d5bb6e5914ce7d949a 669 SUPERFAMILY SSF109709 127 218 9.42E-18 T 28-03-2018 CI104_RS27860 481428eb2ba301d5bb6e5914ce7d949a 669 Pfam PF02195 ParB-like nuclease domain 38 132 4.0E-16 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS07255 32f293e573afb9a36b65613856b53e77 316 Gene3D G3DSA:1.10.10.60 1 54 8.4E-14 T 28-03-2018 CI104_RS07255 32f293e573afb9a36b65613856b53e77 316 SUPERFAMILY SSF100950 63 313 5.98E-67 T 28-03-2018 CI104_RS07255 32f293e573afb9a36b65613856b53e77 316 Gene3D G3DSA:3.40.50.1360 60 314 9.2E-39 T 28-03-2018 CI104_RS07255 32f293e573afb9a36b65613856b53e77 316 Pfam PF04198 Putative sugar-binding domain 63 314 1.6E-62 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CI104_RS26050 9918dacae167719ec9131e52aa56ef39 348 TIGRFAM TIGR02740 TraF-like: TraF-like protein 5 278 1.5E-98 T 28-03-2018 IPR014111 Type IV conjugative transfer system protein TraF CI104_RS26050 9918dacae167719ec9131e52aa56ef39 348 Pfam PF13728 F plasmid transfer operon protein 45 267 2.3E-51 T 28-03-2018 CI104_RS26050 9918dacae167719ec9131e52aa56ef39 348 SUPERFAMILY SSF52833 160 267 1.54E-11 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS26050 9918dacae167719ec9131e52aa56ef39 348 Gene3D G3DSA:3.40.30.10 138 274 9.4E-11 T 28-03-2018 CI104_RS07720 63668ae09115d397753b7c6bcad4dd25 110 Pfam PF13982 YbfN-like lipoprotein 21 107 8.4E-49 T 28-03-2018 IPR025727 YbfN-like lipoprotein CI104_RS21625 e22d1006d43e1e05a440a5e5d940e22a 306 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 130 5.8E-34 T 28-03-2018 IPR010657 ImpA, N-terminal CI104_RS21625 e22d1006d43e1e05a440a5e5d940e22a 306 TIGRFAM TIGR03363 VI_chp_8: type VI secretion-associated protein, ImpA family 3 158 5.9E-50 T 28-03-2018 IPR017740 Type VI secretion system-associated, ImpA CI104_RS21625 e22d1006d43e1e05a440a5e5d940e22a 306 Gene3D G3DSA:1.25.40.120 47 304 2.2E-4 T 28-03-2018 CI104_RS14850 c91eb3c5c2d66777450e8949e1a4a850 527 Pfam PF03237 Terminase-like family 48 276 1.7E-7 T 28-03-2018 CI104_RS14850 c91eb3c5c2d66777450e8949e1a4a850 527 PIRSF PIRSF007056 4 523 7.1E-217 T 28-03-2018 IPR012036 Bacteriophage Mu, Gp28 CI104_RS08635 b6cde717677197eae93b99430f6c61c1 410 Gene3D G3DSA:1.20.1250.20 5 201 2.1E-25 T 28-03-2018 CI104_RS08635 b6cde717677197eae93b99430f6c61c1 410 SUPERFAMILY SSF103473 21 400 1.83E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS08635 b6cde717677197eae93b99430f6c61c1 410 ProSitePatterns PS00216 Sugar transport proteins signature 1. 72 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS08635 b6cde717677197eae93b99430f6c61c1 410 Gene3D G3DSA:1.20.1250.20 210 404 1.1E-7 T 28-03-2018 CI104_RS08635 b6cde717677197eae93b99430f6c61c1 410 Pfam PF07690 Major Facilitator Superfamily 27 363 2.2E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00430 51f08e4a02f3f6d0c372df491e2e995a 575 Pfam PF05170 AsmA family 1 540 5.1E-27 T 28-03-2018 IPR007844 AsmA CI104_RS08470 09c8f8a0535453cfc2dd4bba5e5f7ea4 295 SUPERFAMILY SSF103481 46 136 1.06E-6 T 28-03-2018 CI104_RS08470 09c8f8a0535453cfc2dd4bba5e5f7ea4 295 SUPERFAMILY SSF103481 184 278 1.63E-10 T 28-03-2018 CI104_RS08470 09c8f8a0535453cfc2dd4bba5e5f7ea4 295 Pfam PF00892 EamA-like transporter family 148 277 4.2E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 Pfam PF03466 LysR substrate binding domain 90 292 8.8E-46 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 SUPERFAMILY SSF53850 90 296 3.12E-44 T 28-03-2018 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.9E-22 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 Gene3D G3DSA:3.40.190.10 182 266 4.0E-19 T 28-03-2018 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 Gene3D G3DSA:3.40.190.10 90 181 4.8E-26 T 28-03-2018 CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 Gene3D G3DSA:1.10.10.10 1 85 4.2E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18090 091faee233880a1ae7e0ffc1391d985b 308 SUPERFAMILY SSF46785 3 113 1.25E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 TIGRFAM TIGR00035 asp_race: aspartate racemase 1 223 1.8E-48 T 28-03-2018 IPR004380 Aspartate racemase GO:0006520|GO:0016855 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 Pfam PF01177 Asp/Glu/Hydantoin racemase 8 222 1.9E-56 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 80 88 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 189 199 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 SUPERFAMILY SSF53681 118 226 1.8E-24 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 SUPERFAMILY SSF53681 4 112 2.62E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 Gene3D G3DSA:3.40.50.1860 121 214 1.6E-21 T 28-03-2018 CI104_RS20750 811155b788bb5c80f5da5020e0e5c8ab 244 Gene3D G3DSA:3.40.50.1860 1 120 3.1E-36 T 28-03-2018 CI104_RS13965 ea49579375be6b964b8032e582dcd381 430 SUPERFAMILY SSF53850 20 427 4.06E-58 T 28-03-2018 CI104_RS13965 ea49579375be6b964b8032e582dcd381 430 Gene3D G3DSA:3.40.190.10 21 144 0.0041 T 28-03-2018 CI104_RS13965 ea49579375be6b964b8032e582dcd381 430 Pfam PF01547 Bacterial extracellular solute-binding protein 43 325 2.1E-36 T 28-03-2018 IPR006059 Solute-binding family 1 GO:0006810 CI104_RS13965 ea49579375be6b964b8032e582dcd381 430 Gene3D G3DSA:3.40.190.10 148 364 7.1E-37 T 28-03-2018 CI104_RS13805 4a27235d5af554b6af89b912390f8c75 229 SUPERFAMILY SSF100950 2 224 3.17E-80 T 28-03-2018 CI104_RS13805 4a27235d5af554b6af89b912390f8c75 229 Gene3D G3DSA:3.40.1080.10 2 228 1.9E-82 T 28-03-2018 CI104_RS13805 4a27235d5af554b6af89b912390f8c75 229 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 18 33 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS13805 4a27235d5af554b6af89b912390f8c75 229 SMART SM00882 6 219 1.6E-82 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS13805 4a27235d5af554b6af89b912390f8c75 229 Pfam PF01144 Coenzyme A transferase 8 217 2.8E-71 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS13805 4a27235d5af554b6af89b912390f8c75 229 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 1 220 7.9E-118 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CI104_RS18070 938d32df53317043b99da978502636c2 294 Gene3D G3DSA:3.40.190.10 94 182 4.8E-17 T 28-03-2018 CI104_RS18070 938d32df53317043b99da978502636c2 294 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 1.9E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18070 938d32df53317043b99da978502636c2 294 SUPERFAMILY SSF46785 7 92 1.36E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18070 938d32df53317043b99da978502636c2 294 Gene3D G3DSA:1.10.10.10 1 92 4.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18070 938d32df53317043b99da978502636c2 294 SUPERFAMILY SSF53850 94 293 1.48E-32 T 28-03-2018 CI104_RS18070 938d32df53317043b99da978502636c2 294 Pfam PF03466 LysR substrate binding domain 93 293 8.7E-40 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS18070 938d32df53317043b99da978502636c2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 45 56 6.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18070 938d32df53317043b99da978502636c2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 35 45 6.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18070 938d32df53317043b99da978502636c2 294 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 24 35 6.7E-9 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS18070 938d32df53317043b99da978502636c2 294 Gene3D G3DSA:3.40.190.10 183 271 1.0E-20 T 28-03-2018 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 Pfam PF02954 Bacterial regulatory protein, Fis family 55 95 3.8E-14 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 57 69 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 42 57 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 26 42 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01591 DNA-binding protein FIS signature 9 26 7.6E-35 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 Gene3D G3DSA:1.10.10.60 1 98 4.2E-27 T 28-03-2018 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 SUPERFAMILY SSF46689 4 98 3.88E-27 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PIRSF PIRSF002097 1 98 4.9E-46 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 78 98 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 61 78 8.3E-13 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS02350 e9ff87b2f6cbc07850e519f60813e1f6 98 Hamap MF_00166 DNA-binding protein Fis [fis]. 1 98 33.769 T 28-03-2018 IPR005412 DNA-binding protein Fis GO:0003677|GO:0006355 CI104_RS15155 f6d77b2ec60fb26eaf996a876fdfc9eb 269 PIRSF PIRSF018249 1 268 7.4E-89 T 28-03-2018 IPR016718 rRNA (guanine-N1-)-methyltransferase A, predicted GO:0008168 CI104_RS15155 f6d77b2ec60fb26eaf996a876fdfc9eb 269 Gene3D G3DSA:3.40.50.150 1 269 5.4E-59 T 28-03-2018 CI104_RS15155 f6d77b2ec60fb26eaf996a876fdfc9eb 269 Pfam PF13847 Methyltransferase domain 85 196 1.9E-14 T 28-03-2018 IPR025714 Methyltransferase domain CI104_RS15155 f6d77b2ec60fb26eaf996a876fdfc9eb 269 SUPERFAMILY SSF53335 4 250 4.52E-51 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS01600 0e81a9045a557b1b3f66507c8b971635 108 Hamap MF_01009 Thiosulfate sulfurtransferase GlpE [glpE]. 2 105 30.646 T 28-03-2018 IPR023695 Thiosulfate sulfurtransferase, bacterial GO:0004792|GO:0005737 KEGG: 00920+2.8.1.1|MetaCyc: PWY-5350 CI104_RS01600 0e81a9045a557b1b3f66507c8b971635 108 SMART SM00450 7 102 1.4E-18 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS01600 0e81a9045a557b1b3f66507c8b971635 108 Pfam PF00581 Rhodanese-like domain 9 98 3.6E-14 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS01600 0e81a9045a557b1b3f66507c8b971635 108 SUPERFAMILY SSF52821 2 100 4.71E-28 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS01600 0e81a9045a557b1b3f66507c8b971635 108 Gene3D G3DSA:3.40.250.10 1 108 8.8E-26 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 SUPERFAMILY SSF56801 205 713 3.79E-95 T 28-03-2018 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Pfam PF01553 Acyltransferase 15 137 9.0E-19 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Hamap MF_01162 Bifunctional protein Aas [aas]. 1 717 49.057 T 28-03-2018 IPR023775 Bifunctional protein Aas GO:0006631|GO:0008654|GO:0008779|GO:0008922 KEGG: 00071+6.2.1.20|KEGG: 00564+2.3.1.40|MetaCyc: PWY-6622|MetaCyc: PWY-7032 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 ProSitePatterns PS00455 Putative AMP-binding domain signature. 370 381 - T 28-03-2018 IPR020845 AMP-binding, conserved site CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 SUPERFAMILY SSF69593 5 170 2.75E-20 T 28-03-2018 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 SMART SM00563 30 140 3.0E-28 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Gene3D G3DSA:3.40.50.980 376 525 1.8E-43 T 28-03-2018 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Gene3D G3DSA:3.40.1130.10 4 209 6.3E-27 T 28-03-2018 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Pfam PF00501 AMP-binding enzyme 233 619 8.9E-67 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Gene3D G3DSA:3.40.50.980 210 375 3.6E-21 T 28-03-2018 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Gene3D G3DSA:2.30.38.10 526 612 5.3E-14 T 28-03-2018 CI104_RS20400 07c6772a70097cedd0b8abdbffd85a2e 719 Gene3D G3DSA:3.30.300.30 613 717 6.8E-9 T 28-03-2018 CI104_RS14680 bf57a1aac27178719802a9d907e0cf3e 88 Pfam PF03776 Septum formation topological specificity factor MinE 14 82 3.9E-25 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CI104_RS14680 bf57a1aac27178719802a9d907e0cf3e 88 TIGRFAM TIGR01215 minE: cell division topological specificity factor MinE 1 83 1.3E-36 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CI104_RS14680 bf57a1aac27178719802a9d907e0cf3e 88 SUPERFAMILY SSF55229 32 85 1.31E-18 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CI104_RS14680 bf57a1aac27178719802a9d907e0cf3e 88 Hamap MF_00262 Cell division topological specificity factor [minE]. 3 86 19.902 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CI104_RS14680 bf57a1aac27178719802a9d907e0cf3e 88 Gene3D G3DSA:3.30.1070.10 1 83 1.7E-29 T 28-03-2018 IPR005527 Cell division topological specificity factor MinE GO:0032955|GO:0051301 CI104_RS04525 b59d4d82b313789368627593f57747b2 299 Gene3D G3DSA:3.40.190.10 190 264 9.3E-4 T 28-03-2018 CI104_RS04525 b59d4d82b313789368627593f57747b2 299 SUPERFAMILY SSF53850 90 287 1.4E-26 T 28-03-2018 CI104_RS04525 b59d4d82b313789368627593f57747b2 299 Pfam PF03466 LysR substrate binding domain 96 284 1.5E-11 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS04525 b59d4d82b313789368627593f57747b2 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 65 1.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04525 b59d4d82b313789368627593f57747b2 299 Gene3D G3DSA:3.40.190.10 94 189 7.4E-4 T 28-03-2018 CI104_RS04525 b59d4d82b313789368627593f57747b2 299 Gene3D G3DSA:1.10.10.10 1 86 7.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04525 b59d4d82b313789368627593f57747b2 299 SUPERFAMILY SSF46785 2 85 2.13E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18115 acc52e1c597e4e1e4ba6c9b16c49931a 253 Pfam PF07264 Etoposide-induced protein 2.4 (EI24) 15 231 3.0E-43 T 28-03-2018 CI104_RS18115 acc52e1c597e4e1e4ba6c9b16c49931a 253 Hamap MF_00468 Sulfate transporter CysZ [cysZ]. 9 249 29.063 T 28-03-2018 IPR022985 Sulfate transporter CysZ GO:0000103|GO:0005887|GO:0015116 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 ProSitePatterns PS00362 Ribosomal protein S15 signature. 39 69 - T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 TIGRFAM TIGR00952 S15_bact: ribosomal protein uS15 5 89 1.0E-40 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 Hamap MF_01343_B 30S ribosomal protein S15 [rpsO]. 3 89 22.132 T 28-03-2018 IPR005290 Ribosomal protein S15, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 Gene3D G3DSA:1.10.287.10 2 89 6.6E-37 T 28-03-2018 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 ProDom PD157043 RIBOSOMAL S15 RIBONUCLEOPROTEIN RRNA-BINDING RNA-BINDING 30S CHLOROPLAST S15 MITOCHONDRIAL TYPE 10 88 7.0E-40 T 28-03-2018 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 Pfam PF00312 Ribosomal protein S15 9 88 1.5E-37 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 SUPERFAMILY SSF47060 3 89 5.3E-35 T 28-03-2018 IPR009068 S15/NS1, RNA-binding CI104_RS02910 f0c95edb037e280ed1c68ea87612755d 89 SMART SM01387 8 88 6.6E-52 T 28-03-2018 IPR000589 Ribosomal protein S15 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 SUPERFAMILY SSF57863 86 174 4.97E-9 T 28-03-2018 CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 Pfam PF11967 Recombination protein O N terminal 4 76 5.8E-23 T 28-03-2018 IPR022572 DNA replication/recombination mediator RecO, N-terminal CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 Gene3D G3DSA:2.40.50.140 1 76 5.5E-26 T 28-03-2018 CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 SUPERFAMILY SSF50249 4 75 1.61E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 Hamap MF_00201 DNA repair protein RecO [recO]. 1 231 23.641 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 Pfam PF02565 Recombination protein O C terminal 83 226 3.1E-22 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CI104_RS18805 7bf330973d93999ad9786bb116b6a8e7 236 TIGRFAM TIGR00613 reco: DNA repair protein RecO 5 230 5.4E-38 T 28-03-2018 IPR003717 Recombination protein O, RecO GO:0006281|GO:0006310 CI104_RS03705 89bca3a1a108b2355d4ac2c8debc8cc2 106 Hamap MF_01954 Urease subunit beta [ureB]. 1 101 31.444 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03705 89bca3a1a108b2355d4ac2c8debc8cc2 106 SUPERFAMILY SSF51278 1 103 2.88E-46 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03705 89bca3a1a108b2355d4ac2c8debc8cc2 106 Gene3D G3DSA:2.10.150.10 1 101 2.2E-45 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03705 89bca3a1a108b2355d4ac2c8debc8cc2 106 TIGRFAM TIGR00192 urease_beta: urease, beta subunit 1 101 5.2E-44 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03705 89bca3a1a108b2355d4ac2c8debc8cc2 106 Pfam PF00699 Urease beta subunit 3 99 2.6E-43 T 28-03-2018 IPR002019 Urease, beta subunit KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 Gene3D G3DSA:2.40.50.100 81 275 1.1E-14 T 28-03-2018 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 Gene3D G3DSA:2.40.50.100 51 80 0.0019 T 28-03-2018 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 Pfam PF13437 HlyD family secretion protein 245 347 9.2E-15 T 28-03-2018 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 376 396 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 32 55 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 74 94 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 291 315 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 361 376 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 315 338 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 258 279 1.9E-36 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS19240 7fd2ec3161f23166beacce484589243c 396 Pfam PF13533 Biotin-lipoyl like 68 100 7.4E-8 T 28-03-2018 CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 TIGRFAM TIGR01169 rplA_bact: ribosomal protein uL1 3 227 1.4E-107 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 PIRSF PIRSF002155 1 227 5.0E-79 T 28-03-2018 IPR002143 Ribosomal protein L1 GO:0003723|GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 Hamap MF_01318_B 50S ribosomal protein L1 [rplA]. 2 229 43.461 T 28-03-2018 IPR005878 Ribosomal protein L1, bacterial-type GO:0003723|GO:0003735|GO:0006412|GO:0015934 CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 Gene3D G3DSA:3.40.50.790 68 149 6.2E-35 T 28-03-2018 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 ProSitePatterns PS01199 Ribosomal protein L1 signature. 121 139 - T 28-03-2018 IPR023673 Ribosomal protein L1, conserved site Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 Gene3D G3DSA:3.30.190.20 150 228 1.5E-21 T 28-03-2018 CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 Pfam PF00687 Ribosomal protein L1p/L10e family 30 219 2.8E-52 T 28-03-2018 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CI104_RS23785 fe571cbc137c0e0fb324fa04a95444e0 234 SUPERFAMILY SSF56808 6 225 5.1E-83 T 28-03-2018 IPR023674 Ribosomal protein L1-like CI104_RS13980 6e11d8c6f32508c34e1894e0a5a4347d 119 Pfam PF04024 PspC domain 8 65 3.0E-15 T 28-03-2018 IPR007168 Phage shock protein, PspC, N-terminal CI104_RS13980 6e11d8c6f32508c34e1894e0a5a4347d 119 TIGRFAM TIGR02978 phageshock_pspC: phage shock protein C 7 119 5.1E-39 T 28-03-2018 IPR014320 Phage shock protein, PspC CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 PIRSF PIRSF006614 8 151 1.2E-65 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 SMART SM00851 25 118 4.0E-25 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 TIGRFAM TIGR00160 MGSA: methylglyoxal synthase 11 151 3.2E-73 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 Pfam PF02142 MGS-like domain 26 118 2.1E-18 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 SUPERFAMILY SSF52335 2 147 3.4E-58 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 Hamap MF_00549 Methylglyoxal synthase [mgsA]. 12 131 40.802 T 28-03-2018 IPR004363 Methylglyoxal synthase GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 ProSitePatterns PS01335 Methylglyoxal synthase active site. 65 73 - T 28-03-2018 IPR018148 Methylglyoxal synthase, active site GO:0008929|GO:0019242 KEGG: 00640+4.2.3.3 CI104_RS09280 eea80897deb1ec6b65eea20fc04c91c6 152 Gene3D G3DSA:3.40.50.1380 1 152 7.1E-44 T 28-03-2018 IPR011607 Methylglyoxal synthase-like domain CI104_RS09245 e7d495749ef2a435a5038fa661b49c1c 150 Hamap MF_01073 Macrodomain Ter protein [matP]. 1 148 30.914 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CI104_RS09245 e7d495749ef2a435a5038fa661b49c1c 150 Gene3D G3DSA:1.10.3990.20 74 139 5.9E-5 T 28-03-2018 CI104_RS09245 e7d495749ef2a435a5038fa661b49c1c 150 Pfam PF06303 MatP N-terminal domain 2 85 1.8E-43 T 28-03-2018 IPR035087 MatP, N-terminal CI104_RS09245 e7d495749ef2a435a5038fa661b49c1c 150 ProDom PD033720 UPF0268 YCBG DEHYDROGENASE PM0482 PBPRA1775 PLU1774 YPO1433/Y2737/YP0877 VV1664 HI1323 HD0178 1 131 4.0E-68 T 28-03-2018 IPR009390 Macrodomain Ter protein, MatP GO:0043565 CI104_RS09245 e7d495749ef2a435a5038fa661b49c1c 150 Pfam PF17414 MatP C-terminal ribbon-helix-helix domain 88 147 1.3E-30 T 28-03-2018 IPR035375 MatP, C-terminal ribbon-helix-helix domain CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 SUPERFAMILY SSF50156 384 454 6.7E-15 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Gene3D G3DSA:2.40.10.10 31 139 4.6E-34 T 28-03-2018 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 TIGRFAM TIGR02037 degP_htrA_DO: peptidase Do 41 453 1.3E-161 T 28-03-2018 IPR011782 Peptidase S1C, Do GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 SUPERFAMILY SSF50156 225 350 7.62E-24 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Gene3D G3DSA:2.40.10.10 140 257 1.6E-40 T 28-03-2018 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Gene3D G3DSA:2.30.42.10 367 455 1.4E-14 T 28-03-2018 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Pfam PF13180 PDZ domain 278 358 8.5E-18 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 SUPERFAMILY SSF50494 39 263 1.45E-61 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 PRINTS PR00834 HtrA/DegQ protease family signature 221 238 6.3E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 PRINTS PR00834 HtrA/DegQ protease family signature 199 216 6.3E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 PRINTS PR00834 HtrA/DegQ protease family signature 102 114 6.3E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 PRINTS PR00834 HtrA/DegQ protease family signature 123 143 6.3E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 PRINTS PR00834 HtrA/DegQ protease family signature 307 319 6.3E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 PRINTS PR00834 HtrA/DegQ protease family signature 164 188 6.3E-59 T 28-03-2018 IPR001940 Peptidase S1C GO:0004252|GO:0006508 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Pfam PF13365 Trypsin-like peptidase domain 92 228 1.0E-29 T 28-03-2018 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Gene3D G3DSA:2.30.42.10 262 366 1.1E-26 T 28-03-2018 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 Pfam PF00595 PDZ domain (Also known as DHR or GLGF) 376 443 7.2E-11 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 SMART SM00228 267 349 6.9E-13 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS02550 2b5d057ea74420c91ef637804b52928a 455 SMART SM00228 374 447 1.5E-8 T 28-03-2018 IPR001478 PDZ domain GO:0005515 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 Gene3D G3DSA:1.10.275.10 1 136 1.6E-50 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 SUPERFAMILY SSF48557 1 457 4.4E-123 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 Gene3D G3DSA:1.20.200.10 137 415 3.2E-65 T 28-03-2018 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 Pfam PF10415 Fumarase C C-terminus 405 457 1.8E-13 T 28-03-2018 IPR018951 Fumarase C, C-terminal GO:0006099|GO:0016829 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00149 Fumarate lyase superfamily signature 132 150 2.4E-26 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00149 Fumarate lyase superfamily signature 177 195 2.4E-26 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00149 Fumarate lyase superfamily signature 268 295 2.4E-26 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00149 Fumarate lyase superfamily signature 314 330 2.4E-26 T 28-03-2018 IPR000362 Fumarate lyase family CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00145 Argininosuccinate lyase family signature 172 192 5.2E-5 T 28-03-2018 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00145 Argininosuccinate lyase family signature 314 330 5.2E-5 T 28-03-2018 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 PRINTS PR00145 Argininosuccinate lyase family signature 131 153 5.2E-5 T 28-03-2018 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 ProSitePatterns PS00163 Fumarate lyases signature. 314 323 - T 28-03-2018 IPR020557 Fumarate lyase, conserved site GO:0003824 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 Gene3D G3DSA:1.10.40.30 416 462 9.9E-15 T 28-03-2018 CI104_RS20685 04ab3558698062d83c9a538049c47af5 476 Pfam PF00206 Lyase 10 339 1.1E-84 T 28-03-2018 IPR022761 Fumarate lyase, N-terminal CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.3E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.3E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 216 236 1.3E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.3E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 1.3E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.3E-30 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 SUPERFAMILY SSF51735 4 254 2.59E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 253 4.1E-60 T 28-03-2018 CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 Gene3D G3DSA:3.40.50.720 46 257 2.3E-59 T 28-03-2018 CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 Gene3D G3DSA:3.40.50.720 1 45 4.1E-7 T 28-03-2018 CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21450 c59adffc9554c024a23655e5675c7de4 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 ProDom PD018364 ISOMERASE L-ARABINOSE ARABINOSE METABOLISM CARBOHYDRATE CATABOLISM ARAA 1 303 6.0E-175 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 SUPERFAMILY SSF53743 1 326 2.54E-124 T 28-03-2018 IPR009015 L-fucose isomerase, N-terminal/central domain GO:0005737|GO:0005996|GO:0016861 CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 Pfam PF11762 L-arabinose isomerase C-terminal domain 363 476 7.6E-45 T 28-03-2018 IPR024664 L-arabinose isomerase, C-terminal KEGG: 00040+5.3.1.4 CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 PIRSF PIRSF001478 1 500 2.4E-256 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 Pfam PF02610 L-arabinose isomerase 5 359 4.0E-179 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 Hamap MF_00519 L-arabinose isomerase [araA]. 1 477 64.571 T 28-03-2018 IPR003762 L-arabinose isomerase GO:0008152|GO:0008733 KEGG: 00040+5.3.1.4 CI104_RS04765 9e031540e0af925525d2fa0a3d8fd5e2 500 SUPERFAMILY SSF50443 329 497 8.89E-71 T 28-03-2018 IPR004216 L-fucose/L-arabinose isomerase, C-terminal CI104_RS21965 a51eb4a1a4b1bdc91543f2fe3ee6836e 500 Gene3D G3DSA:3.40.50.300 14 435 4.3E-29 T 28-03-2018 CI104_RS21965 a51eb4a1a4b1bdc91543f2fe3ee6836e 500 SUPERFAMILY SSF52540 13 369 7.56E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21965 a51eb4a1a4b1bdc91543f2fe3ee6836e 500 Pfam PF05872 Bacterial protein of unknown function (DUF853) 5 500 4.1E-248 T 28-03-2018 IPR033186 Helicase HerA-like C-terminal CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 Pfam PF07478 D-ala D-ala ligase C-terminus 147 348 4.3E-82 T 28-03-2018 IPR011095 D-alanine--D-alanine ligase, C-terminal GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 TIGRFAM TIGR01205 D_ala_D_alaTIGR: D-alanine--D-alanine ligase 5 350 3.7E-118 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 Gene3D G3DSA:3.30.1490.20 155 213 1.6E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 SUPERFAMILY SSF56059 140 354 1.17E-61 T 28-03-2018 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 SUPERFAMILY SSF52440 3 139 6.71E-36 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 ProSitePatterns PS00843 D-alanine--D-alanine ligase signature 1. 107 118 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 Hamap MF_00047 D-alanine--D-alanine ligase [ddl]. 4 351 42.779 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 PIRSF PIRSF039102 1 359 5.6E-137 T 28-03-2018 IPR005905 D-alanine--D-alanine ligase GO:0005737|GO:0008716 KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 ProSitePatterns PS00844 D-alanine--D-alanine ligase signature 2. 293 321 - T 28-03-2018 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 Pfam PF01820 D-ala D-ala ligase N-terminus 5 130 3.1E-29 T 28-03-2018 IPR011127 D-alanine--D-alanine ligase, N-terminal domain KEGG: 00473+6.3.2.4|KEGG: 00550+6.3.2.4|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 Gene3D G3DSA:3.30.470.20 214 360 4.7E-43 T 28-03-2018 CI104_RS06045 92eb4bbe12cbc5b63d771c7eb8cbaabb 364 Gene3D G3DSA:3.40.50.20 1 150 3.2E-43 T 28-03-2018 CI104_RS15515 4769191ae7ce12acba478e74d5497183 251 SUPERFAMILY SSF49354 23 150 2.62E-27 T 28-03-2018 IPR008962 PapD-like CI104_RS15515 4769191ae7ce12acba478e74d5497183 251 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 38 149 1.1E-20 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS15515 4769191ae7ce12acba478e74d5497183 251 Gene3D G3DSA:2.60.40.10 160 245 2.5E-9 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS15515 4769191ae7ce12acba478e74d5497183 251 Gene3D G3DSA:2.60.40.10 27 151 4.8E-26 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS07555 67f47313ce200bd18435210b6fcbe844 213 TIGRFAM TIGR00482 TIGR00482: nicotinate (nicotinamide) nucleotide adenylyltransferase 7 212 7.2E-61 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CI104_RS07555 67f47313ce200bd18435210b6fcbe844 213 Hamap MF_00244 Probable nicotinate-nucleotide adenylyltransferase [nadD]. 3 213 29.833 T 28-03-2018 IPR005248 Nicotinate/nicotinamide nucleotide adenylyltransferase GO:0009435|GO:0016779 KEGG: 00760+2.7.7.18|MetaCyc: PWY-5381|MetaCyc: PWY-5653|MetaCyc: PWY-7761|Reactome: R-HSA-196807 CI104_RS07555 67f47313ce200bd18435210b6fcbe844 213 SUPERFAMILY SSF52374 3 213 3.26E-59 T 28-03-2018 CI104_RS07555 67f47313ce200bd18435210b6fcbe844 213 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 6 68 2.0E-12 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS07555 67f47313ce200bd18435210b6fcbe844 213 Pfam PF01467 Cytidylyltransferase-like 7 187 3.7E-36 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS07555 67f47313ce200bd18435210b6fcbe844 213 Gene3D G3DSA:3.40.50.620 2 213 7.0E-58 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS22940 e2d559497effd9e535854a45de908892 800 Pfam PF04879 Molybdopterin oxidoreductase Fe4S4 domain 47 106 3.9E-8 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS22940 e2d559497effd9e535854a45de908892 800 SUPERFAMILY SSF50692 626 800 2.06E-37 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS22940 e2d559497effd9e535854a45de908892 800 Gene3D G3DSA:2.40.40.20 662 800 4.6E-32 T 28-03-2018 CI104_RS22940 e2d559497effd9e535854a45de908892 800 Gene3D G3DSA:3.40.228.10 581 661 6.2E-10 T 28-03-2018 CI104_RS22940 e2d559497effd9e535854a45de908892 800 ProSitePatterns PS00551 Prokaryotic molybdopterin oxidoreductases signature 1. 51 70 - T 28-03-2018 IPR027467 Molybdopterin oxidoreductase, molybdopterin cofactor binding site GO:0051539 KEGG: 00910+1.7.99.4 CI104_RS22940 e2d559497effd9e535854a45de908892 800 Pfam PF00384 Molybdopterin oxidoreductase 109 558 3.2E-74 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS22940 e2d559497effd9e535854a45de908892 800 Gene3D G3DSA:3.40.50.740 319 580 3.9E-36 T 28-03-2018 CI104_RS22940 e2d559497effd9e535854a45de908892 800 TIGRFAM TIGR02166 dmsA_ynfE: anaerobic dimethyl sulfoxide reductase, A subunit, DmsA/YnfE family 1 800 0.0 T 28-03-2018 IPR011888 Anaerobic dimethyl sulphoxide reductase, subunit A, DmsA/YnfE GO:0009389|GO:0030151|GO:0051539|GO:0055114 CI104_RS22940 e2d559497effd9e535854a45de908892 800 Pfam PF01568 Molydopterin dinucleotide binding domain 681 792 8.0E-25 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS22940 e2d559497effd9e535854a45de908892 800 SMART SM00926 46 106 1.5E-9 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS22940 e2d559497effd9e535854a45de908892 800 ProSitePatterns PS00490 Prokaryotic molybdopterin oxidoreductases signature 2. 500 517 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS22940 e2d559497effd9e535854a45de908892 800 Gene3D G3DSA:2.20.25.90 40 110 1.6E-15 T 28-03-2018 CI104_RS22940 e2d559497effd9e535854a45de908892 800 Gene3D G3DSA:3.40.50.740 111 318 2.2E-31 T 28-03-2018 CI104_RS22940 e2d559497effd9e535854a45de908892 800 SUPERFAMILY SSF53706 48 682 1.96E-156 T 28-03-2018 CI104_RS02305 6e6a371a4e844068f1d6d3ead300a219 341 Gene3D G3DSA:3.40.190.10 143 223 5.8E-13 T 28-03-2018 CI104_RS02305 6e6a371a4e844068f1d6d3ead300a219 341 Gene3D G3DSA:3.40.190.10 26 142 1.7E-20 T 28-03-2018 CI104_RS02305 6e6a371a4e844068f1d6d3ead300a219 341 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 59 72 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS02305 6e6a371a4e844068f1d6d3ead300a219 341 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 37 254 6.9E-33 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS02305 6e6a371a4e844068f1d6d3ead300a219 341 SMART SM00062 36 265 1.3E-59 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS02305 6e6a371a4e844068f1d6d3ead300a219 341 SUPERFAMILY SSF53850 27 257 7.24E-49 T 28-03-2018 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 279 290 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 SUPERFAMILY SSF53720 4 483 5.37E-169 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 Pfam PF00171 Aldehyde dehydrogenase family 17 479 2.3E-176 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 Gene3D G3DSA:3.40.309.10 268 465 1.4E-67 T 28-03-2018 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 251 258 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 TIGRFAM TIGR01804 BADH: betaine-aldehyde dehydrogenase 10 477 1.6E-239 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 Hamap MF_00804 NAD/NADP-dependent betaine aldehyde dehydrogenase [betB]. 4 490 57.95 T 28-03-2018 IPR011264 Betaine aldehyde dehydrogenase GO:0008802|GO:0019285|GO:0046872 KEGG: 00260+1.2.1.8|MetaCyc: PWY-3722|MetaCyc: PWY-7494 CI104_RS07190 d0d1f84e08a69445b63597aa32837089 490 Gene3D G3DSA:3.40.605.10 1 267 6.9E-105 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS20500 00c367f6805246b8468d56b80b66a4ab 293 Pfam PF03824 High-affinity nickel-transport protein 13 290 3.0E-57 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 SUPERFAMILY SSF140490 334 429 1.31E-31 T 28-03-2018 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 Pfam PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region 339 421 2.9E-26 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 ProSitePatterns PS00644 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 1. 174 189 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 SUPERFAMILY SSF142019 16 246 1.22E-85 T 28-03-2018 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 SUPERFAMILY SSF142984 248 330 1.44E-20 T 28-03-2018 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 Pfam PF10531 SLBB domain 253 295 1.5E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 Pfam PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit 54 226 1.2E-49 T 28-03-2018 IPR011538 NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 SMART SM00928 336 381 2.0E-21 T 28-03-2018 IPR019575 NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain GO:0051539 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 ProSitePatterns PS00645 Respiratory-chain NADH dehydrogenase 51 Kd subunit signature 2. 349 360 - T 28-03-2018 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site GO:0008137|GO:0010181|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17530 3e12ce222bd861d5a0455c04fbe58528 445 TIGRFAM TIGR01959 nuoF_fam: NADH oxidoreductase (quinone), F subunit 13 423 1.8E-203 T 28-03-2018 IPR011537 NADH ubiquinone oxidoreductase, F subunit GO:0010181|GO:0016651|GO:0051287|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 Pfam PF13740 ACT domain 29 104 2.5E-25 T 28-03-2018 CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 PIRSF PIRSF028103 27 202 5.8E-69 T 28-03-2018 IPR016867 Glycine cleavage system transcriptional repressor GO:0006355 CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 Gene3D G3DSA:3.30.70.260 29 111 4.3E-11 T 28-03-2018 CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 SUPERFAMILY SSF55021 28 110 1.29E-16 T 28-03-2018 CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 Pfam PF01842 ACT domain 119 188 1.7E-6 T 28-03-2018 IPR002912 ACT domain CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 Gene3D G3DSA:3.30.70.260 115 202 1.2E-13 T 28-03-2018 CI104_RS18405 dfd113edd1c9ec5f9b014494df168a88 212 SUPERFAMILY SSF55021 113 201 3.82E-17 T 28-03-2018 CI104_RS13590 89cf8b5bbf2c7ec4e00d51a43a20891d 219 SUPERFAMILY SSF51206 27 127 1.44E-6 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CI104_RS13590 89cf8b5bbf2c7ec4e00d51a43a20891d 219 Pfam PF15977 Winged helix-turn-helix DNA binding 151 216 1.7E-23 T 28-03-2018 CI104_RS13590 89cf8b5bbf2c7ec4e00d51a43a20891d 219 Gene3D G3DSA:2.60.120.10 14 132 1.2E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS00755 116aa17510f1dd07ad304148f1043244 510 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 265 272 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS00755 116aa17510f1dd07ad304148f1043244 510 Pfam PF00171 Aldehyde dehydrogenase family 31 496 9.1E-165 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS00755 116aa17510f1dd07ad304148f1043244 510 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 298 309 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS00755 116aa17510f1dd07ad304148f1043244 510 Gene3D G3DSA:3.40.309.10 283 484 2.8E-65 T 28-03-2018 CI104_RS00755 116aa17510f1dd07ad304148f1043244 510 Gene3D G3DSA:3.40.605.10 16 282 1.5E-95 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS00755 116aa17510f1dd07ad304148f1043244 510 SUPERFAMILY SSF53720 19 503 1.23E-161 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 Pfam PF03946 Ribosomal protein L11, N-terminal domain 9 67 1.2E-29 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 TIGRFAM TIGR01632 L11_bact: ribosomal protein uL11 3 142 2.6E-65 T 28-03-2018 IPR006519 Ribosomal protein L11, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 Hamap MF_00736 50S ribosomal protein L11 [rplK]. 5 142 30.562 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 SMART SM00649 9 141 3.0E-84 T 28-03-2018 IPR000911 Ribosomal protein L11/L12 GO:0003735|GO:0005840|GO:0006412 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 Gene3D G3DSA:1.10.10.250 73 141 6.7E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 SUPERFAMILY SSF54747 3 73 4.97E-30 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 ProDom PD001367 RIBOSOMAL RIBONUCLEOPROTEIN L11 RRNA-BINDING RNA-BINDING METHYLATION 50S L11 BACTERIAL CHLOROPLAST 36 74 2.0E-16 T 28-03-2018 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 Gene3D G3DSA:3.30.1550.10 3 72 9.6E-35 T 28-03-2018 IPR020784 Ribosomal protein L11, N-terminal CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 ProSitePatterns PS00359 Ribosomal protein L11 signature. 127 142 - T 28-03-2018 IPR020785 Ribosomal protein L11, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 Pfam PF00298 Ribosomal protein L11, RNA binding domain 72 140 4.5E-24 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CI104_RS23790 c863f67b8034555e4ecb27dc46716448 142 SUPERFAMILY SSF46906 68 141 8.77E-26 T 28-03-2018 IPR020783 Ribosomal protein L11, C-terminal GO:0003735|GO:0005840|GO:0006412 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 Gene3D G3DSA:3.30.870.10 278 478 4.2E-26 T 28-03-2018 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 Pfam PF13091 PLD-like domain 294 437 3.2E-26 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 Pfam PF13091 PLD-like domain 59 204 8.0E-14 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 Gene3D G3DSA:3.30.870.10 24 219 3.1E-27 T 28-03-2018 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 SMART SM00155 384 411 5.3E-5 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 SMART SM00155 145 172 0.19 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 SUPERFAMILY SSF56024 37 208 2.11E-38 T 28-03-2018 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 Hamap MF_01918 Cardiolipin synthase C [clsC]. 60 493 76.662 T 28-03-2018 IPR030871 Cardiolipin synthase C GO:0032049|GO:0090483 CI104_RS10280 804c1583d890d1a07ecd0af6cecfca4f 493 SUPERFAMILY SSF56024 231 457 1.14E-34 T 28-03-2018 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 Pfam PF01053 Cys/Met metabolism PLP-dependent enzyme 7 391 1.0E-117 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 TIGRFAM TIGR01324 cysta_beta_ly_B: cystathionine beta-lyase 8 393 5.2E-170 T 28-03-2018 IPR006233 Cystathionine beta-lyase, bacterial GO:0004121|GO:0005737|GO:0006520 KEGG: 00270+4.4.1.8|KEGG: 00450+4.4.1.8|MetaCyc: PWY-6936 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 Gene3D G3DSA:3.40.640.10 1 258 2.1E-39 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 PIRSF PIRSF001434 1 395 9.7E-117 T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 ProSitePatterns PS00868 Cys/Met metabolism enzymes pyridoxal-phosphate attachment site. 202 216 - T 28-03-2018 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme GO:0030170 Reactome: R-HSA-1614558|Reactome: R-HSA-1614603|Reactome: R-HSA-2408508 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 Gene3D G3DSA:3.90.1150.10 259 395 3.5E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS03960 dd82f41f9e7b2c453ab759866b283ac2 395 SUPERFAMILY SSF53383 25 392 1.97E-89 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 8.3E-8 T 28-03-2018 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 294 309 8.3E-8 T 28-03-2018 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 8.3E-8 T 28-03-2018 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 Pfam PF01494 FAD binding domain 7 189 1.3E-9 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 SUPERFAMILY SSF54373 180 283 4.71E-23 T 28-03-2018 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 Gene3D G3DSA:3.50.50.60 2 363 1.8E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 SUPERFAMILY SSF51905 4 180 4.21E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS04670 f45317809c3623fb01c942c0a997c97f 428 SUPERFAMILY SSF51905 283 391 4.21E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS22480 a469b776538b57556f2f983edf7acf3a 109 Pfam PF07338 Protein of unknown function (DUF1471) 53 108 4.7E-16 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS22480 a469b776538b57556f2f983edf7acf3a 109 SUPERFAMILY SSF159871 10 108 9.42E-19 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS22480 a469b776538b57556f2f983edf7acf3a 109 Gene3D G3DSA:3.30.1660.10 42 108 2.6E-17 T 28-03-2018 IPR025543 Dodecin-like CI104_RS04655 7c8909ec448621e10915f9c10c02f4e8 505 TIGRFAM TIGR00842 bcct: transporter, betaine/carnitine/choline transporter (BCCT) family 52 499 1.3E-165 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CI104_RS04655 7c8909ec448621e10915f9c10c02f4e8 505 ProSitePatterns PS01303 BCCT family of transporters signature. 315 324 - T 28-03-2018 IPR018093 BCCT transporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS04655 7c8909ec448621e10915f9c10c02f4e8 505 Pfam PF02028 BCCT, betaine/carnitine/choline family transporter 14 499 1.1E-114 T 28-03-2018 IPR000060 BCCT transporter family GO:0005215|GO:0006810|GO:0016020 CI104_RS04655 7c8909ec448621e10915f9c10c02f4e8 505 Hamap MF_01049 L-carnitine/gamma-butyrobetaine antiporter [caiT]. 1 504 60.774 T 28-03-2018 IPR023449 L-carnitine/gamma-butyrobetaine antiporter CaiT GO:0016020|GO:0044667|GO:1900749|GO:1900751 CI104_RS27785 f8ad8b3caf087b9f314670362c8c3cf4 116 Pfam PF05513 TraA 15 114 2.6E-45 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CI104_RS27785 f8ad8b3caf087b9f314670362c8c3cf4 116 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 19 116 2.0E-40 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 Hamap MF_01425 Ferrous-iron efflux pump FieF [fieF]. 1 300 65.301 T 28-03-2018 IPR023783 Cation efflux pump FieF GO:0006829|GO:0015684|GO:0016021|GO:0046873 CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 Gene3D G3DSA:3.30.70.1350 207 290 4.5E-25 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 TIGRFAM TIGR01297 CDF: cation diffusion facilitator family transporter 10 288 6.7E-80 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 SUPERFAMILY SSF161111 8 207 1.19E-51 T 28-03-2018 CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 Gene3D G3DSA:1.20.1510.10 8 206 6.4E-42 T 28-03-2018 CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 Pfam PF16916 Dimerisation domain of Zinc Transporter 210 287 2.5E-26 T 28-03-2018 IPR027470 Cation efflux protein, cytoplasmic domain CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 Pfam PF01545 Cation efflux family 14 206 1.9E-46 T 28-03-2018 IPR002524 Cation efflux protein GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS24215 e79e393b8873e10e7fb97922167b4fa9 300 SUPERFAMILY SSF160240 209 288 1.29E-25 T 28-03-2018 CI104_RS22925 70085a015cb3c10f99f9de64ee0feccc 198 Pfam PF02613 Nitrate reductase delta subunit 46 152 3.0E-18 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS22925 70085a015cb3c10f99f9de64ee0feccc 198 SUPERFAMILY SSF89155 4 196 1.57E-46 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS22925 70085a015cb3c10f99f9de64ee0feccc 198 PIRSF PIRSF004690 1 197 1.3E-39 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CI104_RS22925 70085a015cb3c10f99f9de64ee0feccc 198 Gene3D G3DSA:1.10.3480.10 1 197 2.4E-41 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Gene3D G3DSA:1.20.120.330 285 440 2.5E-50 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 SUPERFAMILY SSF81301 10 286 1.24E-87 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Hamap MF_00802 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme [glnE]. 27 945 20.009 T 28-03-2018 IPR023057 Bifunctional glutamine synthetase adenylyltransferase/adenylyl-removing enzyme GO:0008882 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 SUPERFAMILY SSF81301 525 815 1.67E-88 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Gene3D G3DSA:1.10.4050.10 529 637 9.9E-24 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Gene3D G3DSA:1.10.4050.10 1 110 4.1E-20 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 553 804 3.3E-100 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Pfam PF03710 Glutamate-ammonia ligase adenylyltransferase 31 273 3.9E-94 T 28-03-2018 IPR005190 Glutamate-ammonia ligase adenylyltransferase, repeated domain GO:0008882 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 SUPERFAMILY SSF81593 815 943 4.24E-33 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Gene3D G3DSA:3.30.460.10 113 284 5.2E-57 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Gene3D G3DSA:3.30.460.10 638 811 7.7E-59 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 SUPERFAMILY SSF81593 287 436 1.33E-46 T 28-03-2018 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Pfam PF08335 GlnD PII-uridylyltransferase 297 436 2.3E-46 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Pfam PF08335 GlnD PII-uridylyltransferase 825 917 4.1E-12 T 28-03-2018 IPR013546 PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase GO:0016779 CI104_RS03775 45288f71f6813b6a0f81d68c71198da9 945 Gene3D G3DSA:1.20.120.330 812 945 3.0E-37 T 28-03-2018 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 Pfam PF13377 Periplasmic binding protein-like domain 168 312 6.7E-21 T 28-03-2018 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 6 16 6.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 16 26 6.2E-6 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 Gene3D G3DSA:1.10.10.10 1 19 0.062 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 Gene3D G3DSA:3.40.50.2300 174 304 1.7E-24 T 28-03-2018 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 Gene3D G3DSA:1.10.260.40 20 56 1.7E-21 T 28-03-2018 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 Gene3D G3DSA:3.40.50.2300 57 173 4.4E-19 T 28-03-2018 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 TIGRFAM TIGR02405 trehalos_R_Ecol: trehalose operon repressor 4 314 6.3E-171 T 28-03-2018 IPR012771 Trehalose operon repressor GO:0003677|GO:0005991|GO:0045892 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 ProSitePatterns PS00356 LacI-type HTH domain signature. 7 25 - T 28-03-2018 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 SUPERFAMILY SSF53822 63 314 2.9E-61 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 SUPERFAMILY SSF47413 3 60 1.33E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 51 4.4E-21 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22120 ff3a22a84a4f76fa7d2594b7ebe2dc5c 315 SMART SM00354 4 74 3.5E-33 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22835 49905d07b0d29fe36d29d9702f1bb328 268 Gene3D G3DSA:3.10.129.10 2 166 2.7E-10 T 28-03-2018 CI104_RS22835 49905d07b0d29fe36d29d9702f1bb328 268 Pfam PF01575 MaoC like domain 8 44 8.3E-5 T 28-03-2018 IPR002539 MaoC-like domain CI104_RS22835 49905d07b0d29fe36d29d9702f1bb328 268 SUPERFAMILY SSF54637 6 83 3.07E-10 T 28-03-2018 IPR029069 HotDog domain CI104_RS01270 9201d4d310c47417ec43492a6e61da57 158 PIRSF PIRSF020565 1 157 1.9E-51 T 28-03-2018 IPR016776 3-hydroxylacyl-(acyl carrier protein) dehydratase, predicted CI104_RS01270 9201d4d310c47417ec43492a6e61da57 158 Gene3D G3DSA:3.10.129.10 4 148 1.6E-24 T 28-03-2018 CI104_RS01270 9201d4d310c47417ec43492a6e61da57 158 Pfam PF07977 FabA-like domain 53 135 3.0E-6 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS01270 9201d4d310c47417ec43492a6e61da57 158 SUPERFAMILY SSF54637 9 145 1.35E-24 T 28-03-2018 IPR029069 HotDog domain CI104_RS20100 5ca2cf74b2b748eed11b506b7e5880c9 109 Pfam PF04287 tRNA pseudouridine synthase C 7 103 6.6E-35 T 28-03-2018 IPR023376 YqcC-like domain CI104_RS20100 5ca2cf74b2b748eed11b506b7e5880c9 109 SUPERFAMILY SSF158452 1 107 1.27E-38 T 28-03-2018 IPR023376 YqcC-like domain CI104_RS20100 5ca2cf74b2b748eed11b506b7e5880c9 109 PIRSF PIRSF006257 1 108 1.7E-40 T 28-03-2018 IPR007384 Protein of unknown function UCP006257 CI104_RS20100 5ca2cf74b2b748eed11b506b7e5880c9 109 Gene3D G3DSA:1.20.1440.40 3 104 7.3E-40 T 28-03-2018 IPR023376 YqcC-like domain CI104_RS19645 aad009890102538205106b053abd6bc9 142 Pfam PF09335 SNARE associated Golgi protein 25 133 7.9E-11 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS19645 aad009890102538205106b053abd6bc9 142 ProDom PD085709 MEMBRANE RP436 UNCHARACTERIZED INTEGRAL PREDICTED TRANSMEMBRANE 22 111 0.006 T 28-03-2018 IPR020143 Uncharacterised protein family, RP436 CI104_RS16555 9746462166660737677171f7d093d265 148 Gene3D G3DSA:3.40.50.2300 3 148 5.3E-43 T 28-03-2018 CI104_RS16555 9746462166660737677171f7d093d265 148 SUPERFAMILY SSF52788 1 142 9.55E-43 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CI104_RS16555 9746462166660737677171f7d093d265 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 5 22 5.8E-29 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CI104_RS16555 9746462166660737677171f7d093d265 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 97 110 5.8E-29 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CI104_RS16555 9746462166660737677171f7d093d265 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 41 57 5.8E-29 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CI104_RS16555 9746462166660737677171f7d093d265 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 113 128 5.8E-29 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CI104_RS16555 9746462166660737677171f7d093d265 148 PRINTS PR00719 LMW phosphotyrosine protein phosphatase signature 75 90 5.8E-29 T 28-03-2018 IPR017867 Protein-tyrosine phosphatase, low molecular weight GO:0004725|GO:0006470 CI104_RS16555 9746462166660737677171f7d093d265 148 SMART SM00226 3 141 6.1E-63 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CI104_RS16555 9746462166660737677171f7d093d265 148 Pfam PF01451 Low molecular weight phosphotyrosine protein phosphatase 5 139 6.2E-44 T 28-03-2018 IPR023485 Phosphotyrosine protein phosphatase I superfamily CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 SMART SM00387 465 559 1.1E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 SUPERFAMILY SSF55874 424 555 1.44E-18 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 Pfam PF07730 Histidine kinase 361 425 1.8E-18 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 468 556 1.5E-8 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 SUPERFAMILY SSF158472 175 225 1.57E-7 T 28-03-2018 CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 Pfam PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term 32 128 7.4E-22 T 28-03-2018 IPR029095 NarX-like, N-terminal CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 SMART SM00304 174 227 8.7E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 Gene3D G3DSA:3.30.565.10 424 565 1.2E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 PIRSF PIRSF003167 288 567 3.0E-102 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 PIRSF PIRSF003167 1 293 3.6E-78 T 28-03-2018 IPR016380 Signal transduction histidine kinase, nitrate/nitrite-sensing GO:0000155|GO:0000160|GO:0004673|GO:0016021 CI104_RS18350 4d51ddadd00a40c72d8c87bb23323ca4 568 Pfam PF00672 HAMP domain 175 223 2.1E-12 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 SUPERFAMILY SSF48019 243 366 1.02E-35 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 TIGRFAM TIGR02397 dnaX_nterm: DNA polymerase III, subunit gamma and tau 3 356 5.7E-133 T 28-03-2018 IPR012763 DNA polymerase III, subunit gamma/ tau GO:0003887|GO:0005524|GO:0006260|GO:0009360 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Gene3D G3DSA:1.20.272.10 243 363 2.3E-14 T 28-03-2018 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 SUPERFAMILY SSF52540 35 221 4.53E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Pfam PF12168 DNA polymerase III subunits tau domain IV DnaB-binding 416 497 1.2E-20 T 28-03-2018 IPR022001 DNA polymerase III subunit tau, DnaB-binding domain IV KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Pfam PF12170 DNA polymerase III tau subunit V interacting with alpha 499 639 6.3E-59 T 28-03-2018 IPR021029 DNA polymerase III, tau subunit, domain V GO:0003887 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Pfam PF13177 DNA polymerase III, delta subunit 20 178 5.8E-42 T 28-03-2018 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Gene3D G3DSA:3.40.50.300 1 166 1.1E-39 T 28-03-2018 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 41 59 1.8E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 PRINTS PR00300 ATP-dependent Clp protease ATP-binding subunit signature 124 142 1.8E-5 T 28-03-2018 IPR001270 ClpA/B family GO:0005524 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Pfam PF12169 DNA polymerase III subunits gamma and tau domain III 232 361 1.5E-32 T 28-03-2018 IPR022754 DNA polymerase III, gamma subunit, domain III GO:0003887 CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 SMART SM00382 37 178 1.2E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06620 7a4459614611a8b8ee6f531d6868c525 642 Gene3D G3DSA:1.10.8.60 167 242 1.0E-19 T 28-03-2018 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 ProSitePatterns PS00178 Aminoacyl-transfer RNA synthetases class-I signature. 122 133 - T 28-03-2018 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 SUPERFAMILY SSF52374 110 454 1.3E-97 T 28-03-2018 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Pfam PF00750 tRNA synthetases class I (R) 95 446 9.6E-175 T 28-03-2018 IPR035684 Arginyl-tRNA synthetase, catalytic core domain KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Gene3D G3DSA:3.40.50.620 107 440 1.5E-60 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 SUPERFAMILY SSF55190 2 101 1.57E-23 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Gene3D G3DSA:1.10.730.10 441 577 1.5E-43 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 SMART SM01016 5 87 9.0E-29 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 SMART SM00836 460 577 4.0E-35 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 SUPERFAMILY SSF47323 454 577 2.49E-34 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Pfam PF05746 DALR anticodon binding domain 460 577 6.0E-34 T 28-03-2018 IPR008909 DALR anticodon binding GO:0004814|GO:0005524|GO:0006420 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 153 166 6.8E-26 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 114 129 6.8E-26 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 129 145 6.8E-26 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 PRINTS PR01038 Arginyl-tRNA synthetase signature 303 324 6.8E-26 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Gene3D G3DSA:3.30.1360.70 1 106 8.6E-30 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Hamap MF_00123 Arginine--tRNA ligase [argS]. 5 577 29.177 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 TIGRFAM TIGR00456 argS: arginine--tRNA ligase 3 577 5.5E-215 T 28-03-2018 IPR001278 Arginine-tRNA ligase GO:0004814|GO:0005524|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS15425 b41a349e4964d3172a5333ab60e695ae 577 Pfam PF03485 Arginyl tRNA synthetase N terminal domain 7 87 9.2E-22 T 28-03-2018 IPR005148 Arginyl tRNA synthetase N-terminal domain GO:0000166|GO:0004814|GO:0005524|GO:0005737|GO:0006420 KEGG: 00970+6.1.1.19 CI104_RS00240 efbac9797d0cb7760ee9ff80725410ae 397 Gene3D G3DSA:1.20.1250.20 207 392 7.7E-14 T 28-03-2018 CI104_RS00240 efbac9797d0cb7760ee9ff80725410ae 397 Hamap MF_01189 Purine ribonucleoside efflux pump NepI [nepI]. 3 394 41.105 T 28-03-2018 IPR023680 Purine ribonucleoside efflux pump, NepI GO:0015211|GO:0015860|GO:0016021 CI104_RS00240 efbac9797d0cb7760ee9ff80725410ae 397 SUPERFAMILY SSF103473 14 390 4.58E-50 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00240 efbac9797d0cb7760ee9ff80725410ae 397 Gene3D G3DSA:1.20.1250.20 12 206 4.6E-26 T 28-03-2018 CI104_RS00240 efbac9797d0cb7760ee9ff80725410ae 397 Pfam PF07690 Major Facilitator Superfamily 26 360 9.3E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 Gene3D G3DSA:3.20.190.10 2 120 1.1E-23 T 28-03-2018 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 104 8.6E-11 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 SUPERFAMILY SSF57716 226 262 2.14E-11 T 28-03-2018 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 SUPERFAMILY SSF46946 126 215 1.96E-16 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 SMART SM00898 2 110 2.2E-12 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 127 205 9.0E-10 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 SMART SM01232 126 221 1.3E-13 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 Gene3D G3DSA:1.10.8.50 121 263 2.9E-35 T 28-03-2018 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 ProSitePatterns PS01242 Zinc finger FPG-type signature. 238 262 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 Hamap MF_01253 Endonuclease 8 [nei]. 1 263 60.834 T 28-03-2018 IPR023713 Endonuclease VIII GO:0003684|GO:0004519|GO:0006284|GO:0008270 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 SUPERFAMILY SSF81624 2 127 1.31E-24 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CI104_RS07865 407591eca4772d3df6fb84bb40611a9b 263 Pfam PF06827 Zinc finger found in FPG and IleRS 235 263 1.2E-9 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 Hamap MF_02042 tRNA-dihydrouridine synthase B [dusB]. 1 321 49.504 T 28-03-2018 IPR032887 tRNA-dihydrouridine synthase B GO:0002943|GO:0017150 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 SUPERFAMILY SSF51395 10 319 4.58E-86 T 28-03-2018 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 TIGRFAM TIGR00737 nifR3_yhdG: putative TIM-barrel protein, nifR3 family 3 320 1.6E-140 T 28-03-2018 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 GO:0008033|GO:0016491|GO:0050660|GO:0055114 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 ProSitePatterns PS01136 Uncharacterized protein family UPF0034 signature. 94 112 - T 28-03-2018 IPR018517 tRNA-dihydrouridine synthase, conserved site GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 Pfam PF01207 Dihydrouridine synthase (Dus) 14 318 2.6E-115 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 Gene3D G3DSA:3.20.20.70 8 240 1.2E-54 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 PIRSF PIRSF006621 1 321 3.5E-99 T 28-03-2018 IPR001269 tRNA-dihydrouridine synthase GO:0008033|GO:0017150|GO:0050660|GO:0055114 CI104_RS02355 5aabe65f6e36e1807ede736e09fa417d 321 Gene3D G3DSA:1.10.1200.80 252 321 1.3E-21 T 28-03-2018 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal GO:0016491|GO:0055114 CI104_RS22945 0a50a42ad701c5a1932f7fd4293b216f 316 Pfam PF03824 High-affinity nickel-transport protein 68 169 1.4E-16 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CI104_RS22945 0a50a42ad701c5a1932f7fd4293b216f 316 Pfam PF03824 High-affinity nickel-transport protein 201 300 3.2E-7 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CI104_RS22285 4a10ca4f64fae988208237ae597c0bab 114 SUPERFAMILY SSF110857 1 111 3.92E-34 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CI104_RS22285 4a10ca4f64fae988208237ae597c0bab 114 Gene3D G3DSA:3.10.490.10 1 112 5.4E-29 T 28-03-2018 CI104_RS22285 4a10ca4f64fae988208237ae597c0bab 114 Pfam PF06094 Gamma-glutamyl cyclotransferase, AIG2-like 3 109 1.5E-24 T 28-03-2018 IPR009288 Gamma-glutamylcyclotransferase, AIG2-like CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 Gene3D G3DSA:3.30.70.940 6 119 8.2E-42 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 TIGRFAM TIGR00922 nusG: transcription termination/antitermination factor NusG 9 180 3.3E-71 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 SUPERFAMILY SSF82679 6 116 4.32E-40 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 Gene3D G3DSA:2.30.30.30 122 181 8.0E-22 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 ProSitePatterns PS01014 Transcription termination factor nusG signature. 164 173 - T 28-03-2018 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 Hamap MF_00948 Transcription termination/antitermination protein NusG [nusG]. 6 181 24.779 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 SUPERFAMILY SSF50104 125 180 8.02E-20 T 28-03-2018 IPR008991 Translation protein SH3-like domain CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 PRINTS PR00338 Transcription termination factor NUSG signature 61 73 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 PRINTS PR00338 Transcription termination factor NUSG signature 139 154 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 PRINTS PR00338 Transcription termination factor NUSG signature 157 173 1.9E-21 T 28-03-2018 IPR001062 Transcription antitermination protein, NusG GO:0032784 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 SMART SM00739 127 154 7.9E-7 T 28-03-2018 IPR005824 KOW CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 Pfam PF02357 Transcription termination factor nusG 7 112 1.9E-27 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 SMART SM00738 6 115 8.6E-51 T 28-03-2018 IPR006645 NusG, N-terminal GO:0006355 Reactome: R-HSA-112382|Reactome: R-HSA-112387|Reactome: R-HSA-113418|Reactome: R-HSA-167152|Reactome: R-HSA-167158|Reactome: R-HSA-167160|Reactome: R-HSA-167200|Reactome: R-HSA-167238|Reactome: R-HSA-167242|Reactome: R-HSA-167243|Reactome: R-HSA-167246|Reactome: R-HSA-167287|Reactome: R-HSA-167290|Reactome: R-HSA-674695|Reactome: R-HSA-6796648|Reactome: R-HSA-6807505|Reactome: R-HSA-72086|Reactome: R-HSA-75955|Reactome: R-HSA-77075 CI104_RS23795 30f22bfdfdaf577cf6f78f3e77d25c02 181 Pfam PF00467 KOW motif 130 162 5.5E-8 T 28-03-2018 IPR005824 KOW CI104_RS10915 43cd0b751d94092769630d6bd3507a6c 399 TIGRFAM TIGR02212 lolCE: lipoprotein releasing system, transmembrane protein, LolC/E family 4 399 3.9E-146 T 28-03-2018 IPR011925 Lipoprotein-releasing system transmembrane protein LolC/E GO:0016021|GO:0042953|GO:0042954 CI104_RS10915 43cd0b751d94092769630d6bd3507a6c 399 Pfam PF12704 MacB-like periplasmic core domain 27 208 2.2E-13 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS10915 43cd0b751d94092769630d6bd3507a6c 399 Pfam PF02687 FtsX-like permease family 296 392 3.5E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS10915 43cd0b751d94092769630d6bd3507a6c 399 Gene3D G3DSA:1.10.3720.10 4 382 1.1E-5 T 28-03-2018 CI104_RS01620 bccf9cb92e52071855df48e995e425dc 219 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 43 51 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS01620 bccf9cb92e52071855df48e995e425dc 219 Pfam PF01144 Coenzyme A transferase 5 194 2.2E-38 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS01620 bccf9cb92e52071855df48e995e425dc 219 SUPERFAMILY SSF100950 2 212 1.73E-68 T 28-03-2018 CI104_RS01620 bccf9cb92e52071855df48e995e425dc 219 SMART SM00882 5 198 1.6E-65 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS01620 bccf9cb92e52071855df48e995e425dc 219 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 3 203 1.2E-93 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CI104_RS01620 bccf9cb92e52071855df48e995e425dc 219 Gene3D G3DSA:3.40.1080.10 2 209 7.5E-65 T 28-03-2018 CI104_RS06160 13b3f6f912adc88b02f621904ef9f5eb 213 Gene3D G3DSA:3.40.50.850 2 207 8.7E-34 T 28-03-2018 CI104_RS06160 13b3f6f912adc88b02f621904ef9f5eb 213 Pfam PF00857 Isochorismatase family 12 165 3.7E-23 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS06160 13b3f6f912adc88b02f621904ef9f5eb 213 SUPERFAMILY SSF52499 4 203 2.09E-48 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS08760 5c92d2f3d28278a42315dd22cdf7fd29 242 SUPERFAMILY SSF52540 3 232 7.86E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08760 5c92d2f3d28278a42315dd22cdf7fd29 242 SMART SM00382 27 218 8.2E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08760 5c92d2f3d28278a42315dd22cdf7fd29 242 PIRSF PIRSF039085 1 242 1.9E-84 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS08760 5c92d2f3d28278a42315dd22cdf7fd29 242 Gene3D G3DSA:3.40.50.300 1 242 5.4E-66 T 28-03-2018 CI104_RS08760 5c92d2f3d28278a42315dd22cdf7fd29 242 Pfam PF00005 ABC transporter 20 170 5.1E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08760 5c92d2f3d28278a42315dd22cdf7fd29 242 ProSitePatterns PS00211 ABC transporters family signature. 142 156 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS10025 d0c5d35fda1d0de7be6fe178cddecf29 215 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 207 1.3E-54 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS10025 d0c5d35fda1d0de7be6fe178cddecf29 215 Gene3D G3DSA:3.20.20.70 4 214 6.6E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS10025 d0c5d35fda1d0de7be6fe178cddecf29 215 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 127 140 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS10025 d0c5d35fda1d0de7be6fe178cddecf29 215 Pfam PF01081 KDPG and KHG aldolase 9 200 5.5E-45 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS10025 d0c5d35fda1d0de7be6fe178cddecf29 215 SUPERFAMILY SSF51569 2 209 1.01E-60 T 28-03-2018 CI104_RS05805 6235313db04d4f723b8f9eb7cbf1c614 505 SMART SM00267 340 504 2.8E-27 T 28-03-2018 IPR000160 GGDEF domain CI104_RS05805 6235313db04d4f723b8f9eb7cbf1c614 505 Pfam PF00990 Diguanylate cyclase, GGDEF domain 354 500 6.6E-32 T 28-03-2018 IPR000160 GGDEF domain CI104_RS05805 6235313db04d4f723b8f9eb7cbf1c614 505 Gene3D G3DSA:3.30.70.270 343 504 1.9E-32 T 28-03-2018 CI104_RS05805 6235313db04d4f723b8f9eb7cbf1c614 505 Pfam PF17155 Gammaproteobacterial periplasmic sensor domain 30 312 9.9E-84 T 28-03-2018 IPR033420 Gammaproteobacterial periplasmic sensor domain GAPES1 CI104_RS05805 6235313db04d4f723b8f9eb7cbf1c614 505 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 350 501 1.6E-31 T 28-03-2018 IPR000160 GGDEF domain CI104_RS05805 6235313db04d4f723b8f9eb7cbf1c614 505 SUPERFAMILY SSF55073 357 500 4.24E-30 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 Pfam PF01264 Chorismate synthase 10 345 4.5E-143 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 TIGRFAM TIGR00033 aroC: chorismate synthase 10 350 3.2E-140 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 Gene3D G3DSA:3.60.150.10 3 358 2.1E-162 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 ProSitePatterns PS00787 Chorismate synthase signature 1. 16 31 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 SUPERFAMILY SSF103263 4 353 1.06E-148 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 ProSitePatterns PS00788 Chorismate synthase signature 2. 124 140 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 Hamap MF_00300 Chorismate synthase [aroC]. 10 352 37.76 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 PIRSF PIRSF001456 3 359 3.5E-142 T 28-03-2018 IPR000453 Chorismate synthase GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS17810 ea5c7859e6c1228f5166cf5399c96d38 361 ProSitePatterns PS00789 Chorismate synthase signature 3. 319 335 - T 28-03-2018 IPR020541 Chorismate synthase, conserved site GO:0004107|GO:0009073 KEGG: 00400+4.2.3.5|MetaCyc: PWY-6163 CI104_RS27630 a64f1c48af6dff53efc5bff13ad3d04f 181 Pfam PF13091 PLD-like domain 46 171 1.3E-26 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS27630 a64f1c48af6dff53efc5bff13ad3d04f 181 Gene3D G3DSA:3.30.870.10 27 181 1.8E-29 T 28-03-2018 CI104_RS27630 a64f1c48af6dff53efc5bff13ad3d04f 181 SUPERFAMILY SSF56024 31 176 9.2E-37 T 28-03-2018 CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 Gene3D G3DSA:3.40.50.1100 197 397 4.7E-36 T 28-03-2018 CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 1.0E-187 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 Gene3D G3DSA:3.40.50.1100 9 196 8.0E-45 T 28-03-2018 CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 SUPERFAMILY SSF53686 5 390 3.27E-141 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 PIRSF PIRSF001413 1 397 5.5E-171 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 377 7.6E-49 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14185 e6eae4908ee5c03bf04dbb784985c241 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 48.884 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 SUPERFAMILY SSF46785 21 92 1.71E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 SMART SM00895 117 242 1.5E-7 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 62 78 1.8E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 62 1.8E-10 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 Gene3D G3DSA:1.10.10.10 20 90 2.7E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 Pfam PF00392 Bacterial regulatory proteins, gntR family 27 87 4.3E-18 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 SUPERFAMILY SSF48008 114 241 9.15E-18 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 Pfam PF07729 FCD domain 118 241 1.6E-15 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 Gene3D G3DSA:1.20.120.530 102 242 4.9E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS21485 0c85d2166cb646cfd24d5db35e828107 245 SMART SM00345 29 88 2.4E-19 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS10300 f7205df8ecec77869cb37541b5d36e64 842 Pfam PF00535 Glycosyl transferase family 2 246 428 6.0E-23 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS10300 f7205df8ecec77869cb37541b5d36e64 842 SUPERFAMILY SSF53448 244 532 1.78E-25 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS10300 f7205df8ecec77869cb37541b5d36e64 842 Hamap MF_01072 Glucans biosynthesis glucosyltransferase H [mdoH]. 64 745 52.043 T 28-03-2018 IPR023725 Glucan biosynthesis glucosyltransferase H GO:0016758 CI104_RS10300 f7205df8ecec77869cb37541b5d36e64 842 Gene3D G3DSA:3.90.550.10 223 503 3.6E-19 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS06105 62a9c7dff20a36d1e90ba9aa4dcb9e67 94 SUPERFAMILY SSF51182 1 94 3.7E-34 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS06105 62a9c7dff20a36d1e90ba9aa4dcb9e67 94 Pfam PF06865 Protein of unknown function (DUF1255) 3 93 1.1E-34 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CI104_RS06105 62a9c7dff20a36d1e90ba9aa4dcb9e67 94 Gene3D G3DSA:2.60.120.10 3 93 1.9E-36 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS06105 62a9c7dff20a36d1e90ba9aa4dcb9e67 94 Hamap MF_01537 UPF0345 protein YaiE [yaiE]. 1 94 26.417 T 28-03-2018 IPR009664 Pyrimidine/purine nucleoside phosphorylase CI104_RS07510 4c84219c3a44f20b55c173239e8dae1e 87 SUPERFAMILY SSF117991 1 87 3.27E-31 T 28-03-2018 IPR027471 YbeD-like domain CI104_RS07510 4c84219c3a44f20b55c173239e8dae1e 87 Gene3D G3DSA:3.30.70.260 5 87 1.8E-30 T 28-03-2018 CI104_RS07510 4c84219c3a44f20b55c173239e8dae1e 87 Pfam PF04359 Protein of unknown function (DUF493) 7 87 7.3E-29 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 CI104_RS07510 4c84219c3a44f20b55c173239e8dae1e 87 Hamap MF_00659 UPF0250 protein YbeD [ybeD]. 1 87 26.407 T 28-03-2018 IPR007454 Uncharacterised protein family UPF0250 CI104_RS23085 12a495176eea41c5a2da6eec8f7574a9 150 TIGRFAM TIGR03293 PhnG_redo: phosphonate C-P lyase system protein PhnG 6 148 9.0E-52 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23085 12a495176eea41c5a2da6eec8f7574a9 150 Pfam PF06754 Phosphonate metabolism protein PhnG 7 147 3.6E-52 T 28-03-2018 IPR009609 Phosphonate metabolism PhnG GO:0015716|GO:0019634 KEGG: 00440+2.7.8.37|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS10275 bca09e492e870976562f9c53c2050ef9 177 Pfam PF01661 Macro domain 21 137 5.3E-44 T 28-03-2018 IPR002589 Macro domain CI104_RS10275 bca09e492e870976562f9c53c2050ef9 177 Gene3D G3DSA:3.40.220.10 1 177 5.2E-73 T 28-03-2018 CI104_RS10275 bca09e492e870976562f9c53c2050ef9 177 Hamap MF_01205 O-acetyl-ADP-ribose deacetylase [ymdB]. 2 172 48.659 T 28-03-2018 IPR024900 O-acetyl-ADP-ribose deacetylase CI104_RS10275 bca09e492e870976562f9c53c2050ef9 177 SMART SM00506 4 137 1.1E-56 T 28-03-2018 IPR002589 Macro domain CI104_RS10275 bca09e492e870976562f9c53c2050ef9 177 SUPERFAMILY SSF52949 3 172 1.68E-67 T 28-03-2018 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 SUPERFAMILY SSF46785 5 60 1.53E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 SMART SM00420 6 58 1.2E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 SMART SM01134 72 233 2.7E-58 T 28-03-2018 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 1.0E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 1.0E-8 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 Gene3D G3DSA:1.10.10.10 1 59 3.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 SUPERFAMILY SSF100950 74 234 1.93E-27 T 28-03-2018 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 Pfam PF00455 DeoR C terminal sensor domain 74 232 2.9E-43 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 Gene3D G3DSA:3.40.50.1360 72 237 1.2E-33 T 28-03-2018 CI104_RS23520 3f2fae966df3889ea1fe670320ecd9a9 252 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 1.7E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS10555 e98bf90ae17ee78973ba8f46185583ec 340 Gene3D G3DSA:3.30.160.60 74 108 7.3E-18 T 28-03-2018 CI104_RS10555 e98bf90ae17ee78973ba8f46185583ec 340 Hamap MF_02065 Endolytic murein transglycosylase [mltG]. 5 332 33.15 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CI104_RS10555 e98bf90ae17ee78973ba8f46185583ec 340 Gene3D G3DSA:3.30.160.60 303 337 2.5E-14 T 28-03-2018 CI104_RS10555 e98bf90ae17ee78973ba8f46185583ec 340 TIGRFAM TIGR00247 TIGR00247: conserved hypothetical protein, YceG family 1 337 1.4E-149 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CI104_RS10555 e98bf90ae17ee78973ba8f46185583ec 340 Pfam PF02618 YceG-like family 43 328 1.0E-79 T 28-03-2018 IPR003770 Endolytic murein transglycosylase CI104_RS03415 72e3b076dd469f7a3288c360fe76a804 351 SUPERFAMILY SSF56349 62 329 8.24E-45 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS03415 72e3b076dd469f7a3288c360fe76a804 351 Pfam PF00589 Phage integrase family 173 321 7.6E-23 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS03415 72e3b076dd469f7a3288c360fe76a804 351 Gene3D G3DSA:1.10.150.130 32 173 1.5E-5 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS03415 72e3b076dd469f7a3288c360fe76a804 351 Gene3D G3DSA:1.10.443.10 174 335 1.7E-37 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS27365 11a14165b9f48e49cb97408b9e6b17f1 271 SUPERFAMILY SSF51717 3 266 2.22E-72 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS27365 11a14165b9f48e49cb97408b9e6b17f1 271 Gene3D G3DSA:3.20.20.20 1 271 1.8E-78 T 28-03-2018 CI104_RS27365 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 7 22 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS27365 11a14165b9f48e49cb97408b9e6b17f1 271 Pfam PF00809 Pterin binding enzyme 8 249 3.6E-71 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS27365 11a14165b9f48e49cb97408b9e6b17f1 271 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 7 263 7.8E-75 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS27365 11a14165b9f48e49cb97408b9e6b17f1 271 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 41 54 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS22370 4f0afe1bbb00b015a243ae01957cc1f5 282 SUPERFAMILY SSF51735 2 253 1.92E-64 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS22370 4f0afe1bbb00b015a243ae01957cc1f5 282 Pfam PF05368 NmrA-like family 2 220 1.3E-23 T 28-03-2018 IPR008030 NmrA-like domain Reactome: R-HSA-70635 CI104_RS22370 4f0afe1bbb00b015a243ae01957cc1f5 282 Gene3D G3DSA:3.40.50.720 1 65 1.2E-12 T 28-03-2018 CI104_RS22370 4f0afe1bbb00b015a243ae01957cc1f5 282 Gene3D G3DSA:3.40.50.720 66 222 2.2E-10 T 28-03-2018 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 Gene3D G3DSA:1.10.10.10 1 70 8.3E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 122 133 2.4E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 111 121 2.4E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 150 162 2.4E-14 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 Hamap MF_00015 LexA repressor [lexA]. 3 199 32.817 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 Pfam PF01726 LexA DNA binding domain 1 65 1.9E-31 T 28-03-2018 IPR006199 LexA repressor, DNA-binding domain GO:0004252|GO:0006508 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 SUPERFAMILY SSF51306 76 198 4.36E-39 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 Gene3D G3DSA:2.10.109.10 80 198 7.5E-27 T 28-03-2018 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 TIGRFAM TIGR00498 lexA: repressor LexA 1 199 7.2E-87 T 28-03-2018 IPR006200 Transcription regulator LexA GO:0004252|GO:0009432|GO:0045892 CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 Pfam PF00717 Peptidase S24-like 114 179 7.6E-16 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS23380 0f3323fa7a24619b5f8b9aad62f42cd7 202 SUPERFAMILY SSF46785 3 70 1.14E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26350 2fb38680092a38d0b63488101918e2ed 383 Gene3D G3DSA:3.40.50.1970 8 183 1.3E-45 T 28-03-2018 CI104_RS26350 2fb38680092a38d0b63488101918e2ed 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS26350 2fb38680092a38d0b63488101918e2ed 383 Gene3D G3DSA:1.20.1090.10 184 383 2.8E-66 T 28-03-2018 CI104_RS26350 2fb38680092a38d0b63488101918e2ed 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS26350 2fb38680092a38d0b63488101918e2ed 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 7.9E-122 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS26350 2fb38680092a38d0b63488101918e2ed 383 SUPERFAMILY SSF56796 4 381 5.23E-128 T 28-03-2018 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 Gene3D G3DSA:1.10.10.10 2 89 2.0E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 SUPERFAMILY SSF53850 89 293 1.54E-40 T 28-03-2018 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 SUPERFAMILY SSF46785 4 89 2.37E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 Gene3D G3DSA:3.40.190.10 178 266 1.0E-24 T 28-03-2018 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 2.1E-23 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 Pfam PF03466 LysR substrate binding domain 89 293 4.8E-34 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 1.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 1.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 1.9E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS22195 0fe572e8a9663aab6431e5034095961d 305 Gene3D G3DSA:3.40.190.10 91 177 1.0E-6 T 28-03-2018 CI104_RS17360 c9648fbab4ea69a547eb1208529eae6f 267 SUPERFAMILY SSF51621 4 255 6.57E-81 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS17360 c9648fbab4ea69a547eb1208529eae6f 267 Hamap MF_01290 2-keto-3-deoxy-L-rhamnonate aldolase [rhmA]. 1 267 67.773 T 28-03-2018 IPR023593 2-keto-3-deoxy-L-rhamnonate aldolase GO:0016832 KEGG: 00051+4.1.2.53|MetaCyc: PWY-6713 CI104_RS17360 c9648fbab4ea69a547eb1208529eae6f 267 Gene3D G3DSA:3.20.20.60 1 267 7.7E-55 T 28-03-2018 CI104_RS17360 c9648fbab4ea69a547eb1208529eae6f 267 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 19 244 5.6E-67 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CI104_RS01685 b14ca1e21ac68c9cf16ea3f7b9602bbc 320 Pfam PF04754 Putative transposase, YhgA-like 8 209 5.2E-88 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like CI104_RS01685 b14ca1e21ac68c9cf16ea3f7b9602bbc 320 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 315 1.6E-56 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA CI104_RS01685 b14ca1e21ac68c9cf16ea3f7b9602bbc 320 Gene3D G3DSA:1.10.10.60 263 313 1.8E-4 T 28-03-2018 CI104_RS06230 78d611ce98786430dc4973197f267f78 110 Pfam PF02699 Preprotein translocase subunit 22 99 3.4E-26 T 28-03-2018 IPR003849 Preprotein translocase YajC CI104_RS06230 78d611ce98786430dc4973197f267f78 110 SMART SM01323 19 102 9.7E-37 T 28-03-2018 IPR003849 Preprotein translocase YajC CI104_RS06230 78d611ce98786430dc4973197f267f78 110 TIGRFAM TIGR00739 yajC: preprotein translocase, YajC subunit 19 102 8.2E-34 T 28-03-2018 IPR003849 Preprotein translocase YajC CI104_RS06230 78d611ce98786430dc4973197f267f78 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 59 77 3.1E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC CI104_RS06230 78d611ce98786430dc4973197f267f78 110 PRINTS PR01853 Bacterial YajC preprotein translocase signature 21 41 3.1E-17 T 28-03-2018 IPR003849 Preprotein translocase YajC CI104_RS06955 701d4d9d45a465d052317cdae037f48a 377 SUPERFAMILY SSF56935 44 377 3.05E-29 T 28-03-2018 CI104_RS06955 701d4d9d45a465d052317cdae037f48a 377 Gene3D G3DSA:2.40.160.10 7 377 6.7E-32 T 28-03-2018 CI104_RS02960 f1be84dc7b861535c30f6ac45987b4d8 100 Hamap MF_01029 UPF0213 protein YhbQ [yhbQ]. 1 92 31.464 T 28-03-2018 IPR022992 Uncharacterised protein family UPF0213, GIY-YIG endonuclease CI104_RS02960 f1be84dc7b861535c30f6ac45987b4d8 100 SUPERFAMILY SSF82771 3 72 7.59E-11 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS02960 f1be84dc7b861535c30f6ac45987b4d8 100 Gene3D G3DSA:3.40.1440.10 2 90 3.3E-5 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS02960 f1be84dc7b861535c30f6ac45987b4d8 100 Pfam PF01541 GIY-YIG catalytic domain 4 75 1.8E-12 T 28-03-2018 IPR000305 GIY-YIG nuclease superfamily CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 TIGRFAM TIGR01512 ATPase-IB2_Cd: cadmium-translocating P-type ATPase 183 730 2.2E-162 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF56784 525 726 2.0E-49 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF56784 433 452 2.0E-49 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Pfam PF00702 haloacid dehalogenase-like hydrolase 432 639 5.1E-34 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 TIGRFAM TIGR01525 ATPase-IB_hvy: heavy metal translocating P-type ATPase 183 728 7.5E-180 T 28-03-2018 IPR027256 P-type ATPase, subfamily IB GO:0006812|GO:0016021|GO:0019829 Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF55008 49 111 2.09E-16 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Gene3D G3DSA:3.40.50.1000 555 693 5.7E-36 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 ProSitePatterns PS01047 Heavy-metal-associated domain. 54 83 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Pfam PF00403 Heavy-metal-associated domain 53 110 6.2E-13 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF81653 236 333 4.97E-22 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Gene3D G3DSA:3.40.1110.10 449 554 2.2E-27 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Gene3D G3DSA:1.20.1110.10 124 448 1.9E-29 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF81665 675 714 6.67E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF81665 334 428 6.67E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 SUPERFAMILY SSF81665 186 237 6.67E-19 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 436 442 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Gene3D G3DSA:3.30.70.100 46 118 1.5E-17 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 575 585 8.0E-28 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 553 564 8.0E-28 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 283 297 8.0E-28 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 434 448 8.0E-28 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 649 661 8.0E-28 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 626 645 8.0E-28 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 626 642 7.5E-5 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 657 682 7.5E-5 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 Pfam PF00122 E1-E2 ATPase 234 414 3.1E-48 T 28-03-2018 CI104_RS01375 23205c96435ebd092c53fdbb2892e963 732 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 206 705 8.7E-80 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 27 182 1.2E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 Hamap MF_00505 Chaperone protein HtpG [htpG]. 2 623 32.943 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 ProSitePatterns PS00298 Heat shock hsp90 proteins family signature. 25 34 - T 28-03-2018 IPR019805 Heat shock protein Hsp90, conserved site GO:0005524|GO:0006457|GO:0006950|GO:0051082 CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 SUPERFAMILY SSF110942 510 623 3.4E-35 T 28-03-2018 CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 Pfam PF00183 Hsp90 protein 212 622 1.7E-125 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 SUPERFAMILY SSF54211 230 485 5.84E-102 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 SUPERFAMILY SSF55874 4 214 1.17E-66 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 Gene3D G3DSA:3.30.565.10 29 222 1.4E-53 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 75 92 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 120 142 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 26 48 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 190 208 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 172 189 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 5 25 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PRINTS PR00775 90kDa heat shock protein signature 93 110 1.2E-63 T 28-03-2018 IPR020575 Heat shock protein Hsp90, N-terminal CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 SMART SM00387 27 184 1.6E-12 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06635 bc33f774c762df03606ea46ab3b409cb 624 PIRSF PIRSF002583 1 624 1.8E-219 T 28-03-2018 IPR001404 Heat shock protein Hsp90 family GO:0005524|GO:0006457|GO:0006950|GO:0051082 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 Pfam PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 3 102 1.1E-41 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 PIRSF PIRSF000149 1 331 3.9E-137 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 144 162 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 171 187 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 109 122 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 268 283 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 PRINTS PR00078 Glyceraldehyde-3-phosphate dehydrogenase signature 228 245 5.1E-48 T 28-03-2018 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 Pfam PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 155 312 1.2E-72 T 28-03-2018 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 SUPERFAMILY SSF55347 149 312 1.73E-83 T 28-03-2018 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 Gene3D G3DSA:3.40.50.720 1 159 4.9E-79 T 28-03-2018 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 TIGRFAM TIGR01534 GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 4 324 3.6E-135 T 28-03-2018 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I GO:0006006|GO:0016620|GO:0050661|GO:0051287|GO:0055114 KEGG: 00010+1.2.1.12|KEGG: 00710+1.2.1.12|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6901|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 SMART SM00846 3 150 2.2E-96 T 28-03-2018 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 SUPERFAMILY SSF51735 3 166 1.39E-67 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 ProSitePatterns PS00071 Glyceraldehyde 3-phosphate dehydrogenase active site. 148 155 - T 28-03-2018 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site GO:0016620|GO:0055114 Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS11625 91dda9119e3c63454d5fb2712ad7fe20 331 Gene3D G3DSA:3.30.360.10 160 314 4.1E-84 T 28-03-2018 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 SUPERFAMILY SSF55811 2 125 1.35E-25 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 PRINTS PR00502 NUDIX hydrolase family signature 47 62 1.4E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 PRINTS PR00502 NUDIX hydrolase family signature 33 47 1.4E-6 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 Gene3D G3DSA:3.90.79.10 1 138 7.9E-29 T 28-03-2018 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 Pfam PF00293 NUDIX domain 2 127 2.9E-20 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 Hamap MF_01846 Nucleoside triphosphatase NudI [nudI]. 1 141 44.687 T 28-03-2018 IPR023781 Nucleoside triphosphatase NudI GO:0016818 KEGG: 00240+3.6.1.23+3.6.1.12 CI104_RS17390 402a5ed8c4333f1b1082a9122783f265 141 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 SUPERFAMILY SSF47384 219 301 4.9E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 413 431 5.3E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 PRINTS PR00344 Bacterial sensor protein C-terminal signature 381 395 5.3E-5 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Gene3D G3DSA:3.30.565.10 306 449 2.7E-29 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Pfam PF08521 Two-component sensor kinase N-terminal 22 159 1.2E-6 T 28-03-2018 IPR013727 Two-component sensor kinase, N-terminal CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 353 447 2.8E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Pfam PF00512 His Kinase A (phospho-acceptor) domain 238 301 1.6E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Gene3D G3DSA:1.10.287.130 223 298 7.2E-12 T 28-03-2018 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 SMART SM00388 236 302 4.3E-14 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 SMART SM00387 348 439 5.5E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Gene3D G3DSA:1.20.5.1040 130 183 5.3E-15 T 28-03-2018 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 Gene3D G3DSA:1.20.5.1040 7 58 5.8E-10 T 28-03-2018 CI104_RS03895 118ca2ac0f91992d19748273ed015185 449 SUPERFAMILY SSF55874 291 448 2.75E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 ProSitePatterns PS00716 Sigma-70 factors family signature 2. 252 278 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 SUPERFAMILY SSF88659 199 283 1.18E-18 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 Gene3D G3DSA:1.10.10.10 222 284 1.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 Pfam PF04542 Sigma-70 region 2 53 122 1.4E-16 T 28-03-2018 IPR007627 RNA polymerase sigma-70 region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 Hamap MF_00961 RNA polymerase sigma factor RpoH [rpoH]. 2 284 54.829 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 TIGRFAM TIGR02937 sigma70-ECF: RNA polymerase sigma factor, sigma-70 family 48 281 2.1E-34 T 28-03-2018 IPR014284 RNA polymerase sigma-70 like domain GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 PIRSF PIRSF000770 5 284 1.1E-32 T 28-03-2018 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 Gene3D G3DSA:1.10.601.10 10 122 4.3E-32 T 28-03-2018 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 ProSitePatterns PS00715 Sigma-70 factors family signature 1. 77 90 - T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 PRINTS PR00046 Major sigma-70 factor signature 77 90 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 PRINTS PR00046 Major sigma-70 factor signature 232 244 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 PRINTS PR00046 Major sigma-70 factor signature 267 278 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 PRINTS PR00046 Major sigma-70 factor signature 252 267 4.9E-19 T 28-03-2018 IPR000943 RNA polymerase sigma-70 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 TIGRFAM TIGR02392 rpoH_proteo: alternative sigma factor RpoH 14 283 1.2E-129 T 28-03-2018 IPR012759 RNA polymerase sigma factor RpoH, proteobacteria GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0008270|GO:0009408|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 Pfam PF04545 Sigma-70, region 4 228 280 1.1E-16 T 28-03-2018 IPR007630 RNA polymerase sigma-70 region 4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS01415 86b1d7b7c0b4593b68b59c610108e6a2 284 SUPERFAMILY SSF88946 15 122 1.13E-37 T 28-03-2018 IPR013325 RNA polymerase sigma factor, region 2 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS26025 1203399357f8ddf9d1b35effa2dff9eb 1048 Pfam PF07514 Putative helicase 105 304 1.3E-35 T 28-03-2018 IPR011119 Uncharacterised domain, helicase/relaxase, putative CI104_RS26025 1203399357f8ddf9d1b35effa2dff9eb 1048 Gene3D G3DSA:1.10.3210.10 104 319 2.5E-6 T 28-03-2018 CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 360 815 5.3E-123 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 SMART SM00869 534 804 4.8E-47 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 Pfam PF03212 Pertactin 342 460 4.5E-14 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 SUPERFAMILY SSF51126 43 461 4.08E-36 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 Gene3D G3DSA:2.40.128.130 492 815 2.8E-56 T 28-03-2018 CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 SUPERFAMILY SSF103515 500 815 2.22E-53 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 Pfam PF03797 Autotransporter beta-domain 537 793 2.7E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS05870 28be081961ccb33c1a74f45a18d2b0bb 815 Gene3D G3DSA:2.160.20.20 1 467 3.2E-42 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS20230 3c5c9579253959c623be839f9bf1d5de 215 Gene3D G3DSA:3.40.50.2300 1 122 3.5E-11 T 28-03-2018 CI104_RS20230 3c5c9579253959c623be839f9bf1d5de 215 Gene3D G3DSA:1.10.10.10 123 215 4.2E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20230 3c5c9579253959c623be839f9bf1d5de 215 SMART SM00862 143 214 5.9E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20230 3c5c9579253959c623be839f9bf1d5de 215 SUPERFAMILY SSF46894 117 214 1.64E-24 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS20230 3c5c9579253959c623be839f9bf1d5de 215 SUPERFAMILY SSF52172 2 176 1.11E-11 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS20230 3c5c9579253959c623be839f9bf1d5de 215 Pfam PF00486 Transcriptional regulatory protein, C terminal 143 214 4.2E-18 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 SUPERFAMILY SSF53067 13 133 5.18E-36 T 28-03-2018 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 SUPERFAMILY SSF109604 313 506 1.15E-57 T 28-03-2018 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 TIGRFAM TIGR03706 exo_poly_only: exopolyphosphatase 13 306 1.7E-96 T 28-03-2018 IPR022371 Exopolyphosphatase GO:0004309|GO:0006793 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 Gene3D G3DSA:3.30.420.150 125 305 3.5E-34 T 28-03-2018 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 Gene3D G3DSA:3.30.420.40 1 124 2.6E-37 T 28-03-2018 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 Pfam PF02541 Ppx/GppA phosphatase family 26 308 8.9E-103 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 SUPERFAMILY SSF53067 137 310 2.29E-47 T 28-03-2018 CI104_RS18485 e6b0c77f3e05db938b90f31101b8239e 513 PIRSF PIRSF001267 3 506 6.5E-207 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CI104_RS20390 d0a66b970dc7531fb4de9b54720fdd83 346 PRINTS PR00069 Aldo-keto reductase signature 164 181 3.9E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS20390 d0a66b970dc7531fb4de9b54720fdd83 346 PRINTS PR00069 Aldo-keto reductase signature 116 134 3.9E-8 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS20390 d0a66b970dc7531fb4de9b54720fdd83 346 Gene3D G3DSA:3.20.20.100 1 346 1.5E-93 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS20390 d0a66b970dc7531fb4de9b54720fdd83 346 Pfam PF00248 Aldo/keto reductase family 16 337 2.1E-71 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS20390 d0a66b970dc7531fb4de9b54720fdd83 346 SUPERFAMILY SSF51430 1 344 1.57E-105 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS04035 9329c1810e08d64eda7d47e4719dc1ab 567 Pfam PF00374 Nickel-dependent hydrogenase 39 552 6.2E-209 T 28-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CI104_RS04035 9329c1810e08d64eda7d47e4719dc1ab 567 ProSitePatterns PS00508 Nickel-dependent hydrogenases large subunit signature 2. 543 552 - T 28-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CI104_RS04035 9329c1810e08d64eda7d47e4719dc1ab 567 ProSitePatterns PS00507 Nickel-dependent hydrogenases large subunit signature 1. 39 64 - T 28-03-2018 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site GO:0008901|GO:0016151|GO:0055114 CI104_RS04035 9329c1810e08d64eda7d47e4719dc1ab 567 Gene3D G3DSA:1.10.645.10 1 552 1.8E-181 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS04035 9329c1810e08d64eda7d47e4719dc1ab 567 SUPERFAMILY SSF56762 1 552 8.24E-169 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS21490 0219d2ee3dd0ddf6584c6289c373ead0 570 Pfam PF00920 Dehydratase family 32 557 5.4E-166 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS21490 0219d2ee3dd0ddf6584c6289c373ead0 570 SUPERFAMILY SSF52016 377 560 4.47E-43 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS21490 0219d2ee3dd0ddf6584c6289c373ead0 570 SUPERFAMILY SSF143975 3 374 1.44E-103 T 28-03-2018 CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 167 229 1.0E-14 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 SUPERFAMILY SSF49584 133 232 4.97E-18 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 24 139 1.3E-33 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 PRINTS PR00969 Pili chaperone signature 69 90 6.0E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 PRINTS PR00969 Pili chaperone signature 121 136 6.0E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 PRINTS PR00969 Pili chaperone signature 97 114 6.0E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 PRINTS PR00969 Pili chaperone signature 161 176 6.0E-27 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 Gene3D G3DSA:2.60.40.10 143 238 1.4E-21 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 Gene3D G3DSA:2.60.40.10 24 137 5.8E-30 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS11395 84dc4b71a5932f63c4dd219beb90740e 239 SUPERFAMILY SSF49354 18 139 7.85E-35 T 28-03-2018 IPR008962 PapD-like CI104_RS21480 3ecebb06ed79052f6ca0393de0ec18e0 239 Pfam PF12146 Serine aminopeptidase, S33 28 142 5.5E-8 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CI104_RS21480 3ecebb06ed79052f6ca0393de0ec18e0 239 SUPERFAMILY SSF53474 14 222 2.91E-25 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS21480 3ecebb06ed79052f6ca0393de0ec18e0 239 Gene3D G3DSA:3.40.50.1820 12 237 5.0E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS16485 9a2779e152b3d4f90e7619fbcda380a4 464 Pfam PF13727 CoA-binding domain 65 238 9.5E-40 T 28-03-2018 CI104_RS16485 9a2779e152b3d4f90e7619fbcda380a4 464 TIGRFAM TIGR03023 WcaJ_sugtrans: undecaprenyl-phosphate glucose phosphotransferase 28 464 3.0E-165 T 28-03-2018 IPR017473 Undecaprenyl-phosphate glucose phosphotransferase, WcaJ MetaCyc: PWY-6655|MetaCyc: PWY-6658 CI104_RS16485 9a2779e152b3d4f90e7619fbcda380a4 464 TIGRFAM TIGR03025 EPS_sugtrans: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase 28 464 4.4E-150 T 28-03-2018 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CI104_RS16485 9a2779e152b3d4f90e7619fbcda380a4 464 Pfam PF02397 Bacterial sugar transferase 274 456 6.4E-67 T 28-03-2018 IPR003362 Bacterial sugar transferase CI104_RS16485 9a2779e152b3d4f90e7619fbcda380a4 464 Gene3D G3DSA:3.40.50.720 141 263 3.1E-14 T 28-03-2018 CI104_RS16485 9a2779e152b3d4f90e7619fbcda380a4 464 SUPERFAMILY SSF51735 143 269 2.13E-5 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 ProDom PD000944 ATP SYNTHASE ION EPSILON SUBUNIT HYDROLASE CF1 SYNTHESIS CHAIN HYDROGEN 10 90 2.0E-39 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 Gene3D G3DSA:2.60.15.10 1 90 1.2E-27 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 Hamap MF_00530 ATP synthase epsilon chain [atpC]. 3 131 21.743 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 Gene3D G3DSA:1.20.5.440 91 131 1.8E-13 T 28-03-2018 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 Pfam PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain 6 84 1.7E-29 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 TIGRFAM TIGR01216 ATP_synt_epsi: ATP synthase F1, epsilon subunit 4 133 1.9E-46 T 28-03-2018 IPR001469 ATP synthase, F1 complex, delta/epsilon subunit GO:0015986|GO:0045261|GO:0046933 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 Pfam PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain 89 133 2.7E-13 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 SUPERFAMILY SSF46604 88 137 1.83E-15 T 28-03-2018 IPR020547 ATP synthase delta/epsilon subunit, C-terminal domain Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25190 7c822d833aaa9ab068106d69b8936a09 139 SUPERFAMILY SSF51344 3 86 2.49E-24 T 28-03-2018 IPR020546 ATP synthase, F1 complex, delta/epsilon subunit, N-terminal GO:0015986 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 Gene3D G3DSA:1.10.150.20 6 41 0.38 T 28-03-2018 CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 SMART SM00493 81 166 5.3E-20 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 TIGRFAM TIGR00615 recR: recombination protein RecR 2 197 6.1E-83 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 Pfam PF13662 Toprim domain 82 172 7.7E-24 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 Hamap MF_00017 Recombination protein RecR [recR]. 1 199 104.414 T 28-03-2018 IPR000093 DNA recombination protein RecR GO:0003677|GO:0006281|GO:0006310 CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 Pfam PF02132 RecR protein 41 77 1.6E-15 T 28-03-2018 IPR023628 Recombination protein RecR, C4-type zinc finger CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 ProSitePatterns PS01300 RecR protein signature. 57 78 - T 28-03-2018 IPR015967 Recombination protein RecR, conserved site GO:0006281|GO:0006310 CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 SUPERFAMILY SSF111304 2 199 2.35E-72 T 28-03-2018 IPR023627 Recombination protein RecR CI104_RS06630 b40a58bd563dd0318c659c75c0589799 201 Gene3D G3DSA:3.40.1360.10 78 171 1.2E-34 T 28-03-2018 CI104_RS07575 8128f5c3d4ec575e38553b2086d0f2e4 160 Pfam PF07295 Zinc-ribbon containing domain 14 157 4.7E-54 T 28-03-2018 IPR009912 Zinc-ribbon containing domain CI104_RS06675 6664d738386abb825b00e68f14b31f34 406 Gene3D G3DSA:1.20.1250.20 20 214 8.4E-20 T 28-03-2018 CI104_RS06675 6664d738386abb825b00e68f14b31f34 406 SUPERFAMILY SSF103473 17 401 1.57E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS06675 6664d738386abb825b00e68f14b31f34 406 Pfam PF07690 Major Facilitator Superfamily 31 363 2.5E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS06675 6664d738386abb825b00e68f14b31f34 406 Gene3D G3DSA:1.20.1250.20 217 405 2.5E-25 T 28-03-2018 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 Gene3D G3DSA:3.30.930.10 2 249 9.6E-73 T 28-03-2018 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 Pfam PF10437 Bacterial lipoate protein ligase C-terminus 250 332 4.0E-18 T 28-03-2018 IPR019491 Lipoate protein ligase, C-terminal KEGG: 00785+6.3.1.20 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 TIGRFAM TIGR00545 lipoyltrans: lipoyltransferase and lipoate-protein ligase 1 329 2.7E-138 T 28-03-2018 IPR004562 Lipoyltransferase/lipoate-protein ligase GO:0009249 KEGG: 00785+6.3.1.20|Reactome: R-HSA-389661 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 Pfam PF03099 Biotin/lipoate A/B protein ligase family 52 157 9.0E-9 T 28-03-2018 IPR004143 Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL), catalytic domain GO:0006464 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 Hamap MF_01602 Lipoate-protein ligase A [lplA]. 1 338 59.44 T 28-03-2018 IPR023741 Lipoate-protein ligase A GO:0016979|GO:0018055 KEGG: 00785+6.3.1.20 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 Gene3D G3DSA:3.30.390.50 250 337 8.4E-24 T 28-03-2018 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 SUPERFAMILY SSF82649 248 336 8.89E-25 T 28-03-2018 CI104_RS21160 40c509db57c1737ccd5f2c079d38bdfe 338 SUPERFAMILY SSF55681 3 247 1.41E-80 T 28-03-2018 CI104_RS19505 70d0a4ff70e56d9d4d416158d7d47bea 466 PIRSF PIRSF006060 1 460 1.7E-72 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS19505 70d0a4ff70e56d9d4d416158d7d47bea 466 TIGRFAM TIGR01773 GABAperm: GABA permease 1 452 9.2E-251 T 28-03-2018 IPR011265 GABA permease GO:0015185|GO:0015812|GO:0016021 CI104_RS19505 70d0a4ff70e56d9d4d416158d7d47bea 466 ProSitePatterns PS00218 Amino acid permeases signature. 43 73 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS19505 70d0a4ff70e56d9d4d416158d7d47bea 466 Pfam PF00324 Amino acid permease 18 455 2.4E-124 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 Pfam PF07687 Peptidase dimerisation domain 206 303 1.3E-11 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 TIGRFAM TIGR01882 peptidase-T: peptidase T 2 405 8.2E-156 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 SUPERFAMILY SSF55031 208 320 3.51E-43 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 73 82 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 Gene3D G3DSA:3.40.630.10 1 407 6.3E-47 T 28-03-2018 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 Pfam PF01546 Peptidase family M20/M25/M40 139 401 7.9E-17 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 SUPERFAMILY SSF53187 322 401 8.2E-83 T 28-03-2018 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 SUPERFAMILY SSF53187 1 209 8.2E-83 T 28-03-2018 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 Hamap MF_00550 Peptidase T [pepT]. 1 404 55.648 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 ProSitePatterns PS00759 ArgE / dapE / ACY1 / CPG2 / yscS family signature 2. 138 176 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS10965 cf289b4a03686c3f5eb907b597d69c8c 408 PIRSF PIRSF037215 1 408 3.6E-181 T 28-03-2018 IPR010161 Peptidase M20B, tripeptide aminopeptidase GO:0005737|GO:0006518|GO:0008270|GO:0045148 CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 Gene3D G3DSA:3.40.190.10 180 265 1.1E-8 T 28-03-2018 CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 62 1.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 Pfam PF03466 LysR substrate binding domain 88 290 6.3E-25 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 SUPERFAMILY SSF53850 88 290 2.35E-27 T 28-03-2018 CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 SUPERFAMILY SSF46785 6 88 9.26E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 Gene3D G3DSA:1.10.10.10 4 84 1.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12350 3bcf77eb5a43093c1a65b75a9175279b 310 Gene3D G3DSA:3.40.190.10 89 179 8.3E-8 T 28-03-2018 CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 Pfam PF02682 Carboxyltransferase domain, subdomain C and D 6 202 8.9E-72 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 TIGRFAM TIGR00370 TIGR00370: sensor histidine kinase inhibitor, KipI family 9 211 2.7E-103 T 28-03-2018 IPR010016 KipI family CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 SUPERFAMILY SSF50891 88 214 1.59E-46 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 SUPERFAMILY SSF160467 5 92 5.23E-10 T 28-03-2018 CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 SMART SM00796 4 202 2.3E-96 T 28-03-2018 IPR003833 Carboxyltransferase domain, subdomain C and D CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 Gene3D G3DSA:3.30.1360.40 1 82 8.7E-10 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CI104_RS07835 f404e72c235344dc8ab1d4d53b9080e0 218 Gene3D G3DSA:2.40.100.10 86 217 1.5E-51 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS01290 c1c884fdf5d786c07b20849a6c7ce792 201 SUPERFAMILY SSF89392 20 187 4.32E-23 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CI104_RS01290 c1c884fdf5d786c07b20849a6c7ce792 201 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 187 2.9E-10 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CI104_RS01290 c1c884fdf5d786c07b20849a6c7ce792 201 Gene3D G3DSA:2.50.20.10 18 194 4.1E-19 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00397 Sirohaem Fe-binding site signature 679 697 7.9E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00397 Sirohaem Fe-binding site signature 636 654 7.9E-6 T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Gene3D G3DSA:3.50.50.60 121 252 2.5E-26 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Pfam PF04324 BFD-like [2Fe-2S] binding domain 424 471 1.4E-14 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Gene3D G3DSA:3.90.480.10 447 629 8.3E-7 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 TIGRFAM TIGR02374 nitri_red_nirB: nitrite reductase [NAD(P)H], large subunit 6 801 0.0 T 28-03-2018 IPR012744 Nitrite reductase [NAD(P)H] large subunit, NirB GO:0008942|GO:0042128|GO:0050660|GO:0050661|GO:0055114 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Pfam PF01077 Nitrite and sulphite reductase 4Fe-4S domain 633 768 2.7E-15 T 28-03-2018 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 5 292 1.2E-51 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 SUPERFAMILY SSF56014 633 809 4.06E-47 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 276 283 3.0E-11 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 235 249 3.0E-11 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 147 172 3.0E-11 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 105 114 3.0E-11 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Gene3D G3DSA:3.30.413.10 631 816 8.3E-37 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Pfam PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain 560 622 1.8E-10 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 SUPERFAMILY SSF55124 502 627 2.45E-31 T 28-03-2018 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain GO:0016491|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PIRSF PIRSF037149 1 835 0.0 T 28-03-2018 IPR017121 Nitrite reductase [NAD(P)H], large subunit GO:0042128 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 102 120 5.9E-14 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 261 283 5.9E-14 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 147 165 5.9E-14 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 234 250 5.9E-14 T 28-03-2018 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 ProSitePatterns PS00365 Nitrite and sulfite reductases iron-sulfur/siroheme-binding site. 679 695 - T 28-03-2018 IPR006066 Nitrite/sulphite reductase iron-sulphur/sirohaem-binding site GO:0016491|GO:0020037|GO:0051536|GO:0055114 KEGG: 00920+1.8.1.2|MetaCyc: PWY-6683 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 SUPERFAMILY SSF51905 194 320 1.25E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 SUPERFAMILY SSF51905 1 164 1.25E-37 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Gene3D G3DSA:3.50.50.60 1 120 9.9E-11 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS01870 69f2c5193088bf4f6689eea133c462e9 847 Gene3D G3DSA:3.50.50.60 253 323 5.1E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS24165 a9e6413a35c8def0232439923cffd266 255 TIGRFAM TIGR00419 tim: triose-phosphate isomerase 5 240 3.6E-105 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS24165 a9e6413a35c8def0232439923cffd266 255 ProSitePatterns PS00171 Triosephosphate isomerase active site. 165 175 - T 28-03-2018 IPR020861 Triosephosphate isomerase, active site GO:0004807 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS24165 a9e6413a35c8def0232439923cffd266 255 Pfam PF00121 Triosephosphate isomerase 5 246 1.2E-93 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS24165 a9e6413a35c8def0232439923cffd266 255 SUPERFAMILY SSF51351 1 248 3.8E-91 T 28-03-2018 IPR000652 Triosephosphate isomerase GO:0004807|GO:0008152 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS24165 a9e6413a35c8def0232439923cffd266 255 Gene3D G3DSA:3.20.20.70 1 255 1.5E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24165 a9e6413a35c8def0232439923cffd266 255 Hamap MF_00147_B Triosephosphate isomerase [tpiA]. 2 249 40.636 T 28-03-2018 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic GO:0004807|GO:0006096 KEGG: 00010+5.3.1.1|KEGG: 00051+5.3.1.1|KEGG: 00562+5.3.1.1|KEGG: 00710+5.3.1.1|MetaCyc: PWY-1042|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7003|Reactome: R-HSA-70171|Reactome: R-HSA-70263 CI104_RS02245 89417c0242a614027403c07bb2efcb94 85 Gene3D G3DSA:3.30.160.140 5 83 1.5E-31 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 CI104_RS02245 89417c0242a614027403c07bb2efcb94 85 Pfam PF07369 Protein of unknown function (DUF1488) 5 84 8.3E-29 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 CI104_RS02245 89417c0242a614027403c07bb2efcb94 85 SUPERFAMILY SSF160272 1 84 4.58E-32 T 28-03-2018 IPR009962 Protein of unknown function DUF1488 CI104_RS17505 26e88bb20aa45666ba298fd045b8a027 100 Hamap MF_01456 NAD(P)H-quinone oxidoreductase subunit 4L, chloroplastic [ndhE]. 2 100 19.378 T 28-03-2018 IPR001133 NADH-ubiquinone oxidoreductase chain 4L/K GO:0016651|GO:0042773|GO:0055114 CI104_RS17505 26e88bb20aa45666ba298fd045b8a027 100 Pfam PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L 8 95 8.1E-21 T 28-03-2018 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 Gene3D G3DSA:3.30.470.20 156 337 2.5E-33 T 28-03-2018 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 SUPERFAMILY SSF56059 79 274 1.77E-57 T 28-03-2018 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 TIGRFAM TIGR01161 purK: phosphoribosylaminoimidazole carboxylase, ATPase subunit 3 329 5.1E-114 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 SUPERFAMILY SSF51246 278 353 1.49E-20 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 Gene3D G3DSA:3.30.1490.20 94 155 8.2E-11 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 Hamap MF_01928 N5-carboxyaminoimidazole ribonucleotide synthase [purK]. 3 325 33.476 T 28-03-2018 IPR005875 Phosphoribosylaminoimidazole carboxylase, ATPase subunit GO:0004638|GO:0006189 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 Gene3D G3DSA:3.40.50.20 1 69 1.1E-15 T 28-03-2018 CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 SUPERFAMILY SSF52440 2 76 7.63E-16 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS06965 548fc117f38885bd1375105fa02bede4 355 Pfam PF02222 ATP-grasp domain 88 254 4.4E-55 T 28-03-2018 IPR003135 ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 Hamap MF_01238 Putative sialic acid transporter [nanT]. 1 488 54.675 T 28-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 Pfam PF07690 Major Facilitator Superfamily 26 288 2.1E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 SUPERFAMILY SSF103473 267 452 6.28E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 SUPERFAMILY SSF103473 8 203 6.28E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 TIGRFAM TIGR00891 2A0112: MFS transporter, sialate:H+ symporter (SHS) family 9 442 2.1E-188 T 28-03-2018 IPR004742 Sialic acid transporter GO:0015144|GO:0016021|GO:0034219 CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 Gene3D G3DSA:1.20.1250.20 267 467 1.7E-19 T 28-03-2018 CI104_RS02605 57a5e21e2965d4cb7495dc011283a0cc 496 Gene3D G3DSA:1.20.1250.20 11 209 2.2E-34 T 28-03-2018 CI104_RS16080 87b24f091a6e06d3313c000da2f898f0 247 Pfam PF02654 Cobalamin-5-phosphate synthase 9 244 4.3E-53 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16080 87b24f091a6e06d3313c000da2f898f0 247 Hamap MF_00719 Adenosylcobinamide-GDP ribazoletransferase [cobS]. 1 247 48.667 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16080 87b24f091a6e06d3313c000da2f898f0 247 TIGRFAM TIGR00317 cobS: cobalamin 5'-phosphate synthase 1 246 5.6E-83 T 28-03-2018 IPR003805 Adenosylcobinamide-GDP ribazoletransferase GO:0008818|GO:0009236|GO:0051073 KEGG: 00860+2.7.8.26|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 Pfam PF13793 N-terminal domain of ribose phosphate pyrophosphokinase 4 121 1.9E-49 T 28-03-2018 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 SUPERFAMILY SSF53271 69 306 7.85E-67 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 SMART SM01400 4 121 5.7E-76 T 28-03-2018 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 TIGRFAM TIGR01251 ribP_PPkin: ribose-phosphate diphosphokinase 4 314 1.8E-127 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 Pfam PF14572 Phosphoribosyl synthetase-associated domain 204 313 1.5E-30 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 Gene3D G3DSA:3.40.50.2020 153 307 1.0E-42 T 28-03-2018 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 Gene3D G3DSA:3.40.50.2020 1 152 8.5E-66 T 28-03-2018 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 ProSitePatterns PS00114 Phosphoribosyl pyrophosphate synthase signature. 129 144 - T 28-03-2018 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site GO:0000287|GO:0004749|GO:0009156|GO:0044249 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1|Reactome: R-HSA-73843 CI104_RS14460 9345abfa17bfed25372c2eef21741fe4 315 Hamap MF_00583_B Ribose-phosphate pyrophosphokinase [prs]. 4 314 49.752 T 28-03-2018 IPR005946 Ribose-phosphate diphosphokinase GO:0000287|GO:0004749|GO:0009165 KEGG: 00030+2.7.6.1|KEGG: 00230+2.7.6.1 CI104_RS13985 32abb7749d1a74f901e8485b40316a6f 74 Pfam PF06667 Phage shock protein B 3 73 6.9E-32 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CI104_RS13985 32abb7749d1a74f901e8485b40316a6f 74 TIGRFAM TIGR02976 phageshock_pspB: phage shock protein B 1 74 1.5E-32 T 28-03-2018 IPR009554 Phage shock protein B GO:0006355|GO:0009271 CI104_RS18765 b6073b8788646efe0260727aa220e4c7 165 Gene3D G3DSA:3.40.140.10 2 161 2.6E-53 T 28-03-2018 CI104_RS18765 b6073b8788646efe0260727aa220e4c7 165 ProSitePatterns PS00903 Cytidine and deoxycytidylate deaminases zinc-binding region signature. 57 94 - T 28-03-2018 IPR016192 APOBEC/CMP deaminase, zinc-binding GO:0008270|GO:0016787 CI104_RS18765 b6073b8788646efe0260727aa220e4c7 165 SUPERFAMILY SSF53927 7 157 1.34E-59 T 28-03-2018 IPR016193 Cytidine deaminase-like GO:0003824 CI104_RS18765 b6073b8788646efe0260727aa220e4c7 165 Hamap MF_00972 tRNA-specific adenosine deaminase [tadA]. 12 153 49.11 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CI104_RS18765 b6073b8788646efe0260727aa220e4c7 165 Pfam PF14437 MafB19-like deaminase 7 153 3.8E-33 T 28-03-2018 IPR028883 tRNA-specific adenosine deaminase GO:0002100|GO:0008251 Reactome: R-HSA-6782315 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 TIGRFAM TIGR00067 glut_race: glutamate racemase 24 272 2.3E-92 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 ProSitePatterns PS00924 Aspartate and glutamate racemases signature 2. 200 210 - T 28-03-2018 IPR033134 Asp/Glu racemase, active site 2 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 Gene3D G3DSA:3.40.50.1860 140 273 4.5E-28 T 28-03-2018 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 Pfam PF01177 Asp/Glu/Hydantoin racemase 26 235 1.6E-24 T 28-03-2018 IPR015942 Asp/Glu/hydantoin racemase GO:0006807|GO:0036361 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 ProSitePatterns PS00923 Aspartate and glutamate racemases signature 1. 89 97 - T 28-03-2018 IPR018187 Asp/Glu racemase, active site 1 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 SUPERFAMILY SSF53681 127 279 5.45E-33 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 Gene3D G3DSA:3.40.50.1860 20 139 1.7E-26 T 28-03-2018 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 SUPERFAMILY SSF53681 24 125 9.15E-31 T 28-03-2018 IPR001920 Asp/Glu racemase GO:0008152|GO:0016855 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23880 9b8558616915d38f87c4a26fd4701f23 283 Hamap MF_00258 Glutamate racemase [murI]. 22 274 34.476 T 28-03-2018 IPR004391 Glutamate racemase GO:0008881|GO:0009252 KEGG: 00471+5.1.1.3|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 PIRSF PIRSF000167 3 454 1.2E-178 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 Gene3D G3DSA:3.20.20.70 41 353 1.5E-45 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 Pfam PF04055 Radical SAM superfamily 57 227 2.2E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 Pfam PF06969 HemN C-terminal domain 363 431 4.7E-8 T 28-03-2018 IPR010723 HemN, C-terminal CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 SMART SM00729 52 272 8.6E-56 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 TIGRFAM TIGR00538 hemN: oxygen-independent coproporphyrinogen III oxidase 6 457 1.7E-236 T 28-03-2018 IPR004558 Oxygen-independent coproporphyrinogen III oxidase HemN GO:0004109|GO:0005737|GO:0006779|GO:0055114 CI104_RS24550 e6159e7499864cb08efdfae2719dc53f 457 SUPERFAMILY SSF102114 6 444 2.75E-147 T 28-03-2018 CI104_RS01875 c8908de18739b89c41e5b248fcd0853f 392 Gene3D G3DSA:1.20.1250.20 1 200 4.7E-20 T 28-03-2018 CI104_RS01875 c8908de18739b89c41e5b248fcd0853f 392 Gene3D G3DSA:1.20.1250.20 201 387 4.3E-15 T 28-03-2018 CI104_RS01875 c8908de18739b89c41e5b248fcd0853f 392 SUPERFAMILY SSF103473 4 386 3.66E-40 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS01875 c8908de18739b89c41e5b248fcd0853f 392 Pfam PF07690 Major Facilitator Superfamily 14 319 1.5E-23 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS01875 c8908de18739b89c41e5b248fcd0853f 392 Hamap MF_01044 Protein TsgA [tsgA]. 1 388 30.47 T 28-03-2018 IPR023528 Major facilitator superfamily transporter, TsgA CI104_RS13860 9f08ed058eba4d4eed734aac8ed55af3 242 SUPERFAMILY SSF53187 134 216 1.55E-32 T 28-03-2018 CI104_RS13860 9f08ed058eba4d4eed734aac8ed55af3 242 SUPERFAMILY SSF53187 18 107 1.55E-32 T 28-03-2018 CI104_RS13860 9f08ed058eba4d4eed734aac8ed55af3 242 Gene3D G3DSA:3.40.630.10 34 237 3.0E-27 T 28-03-2018 CI104_RS13860 9f08ed058eba4d4eed734aac8ed55af3 242 Pfam PF00246 Zinc carboxypeptidase 37 157 7.0E-13 T 28-03-2018 IPR000834 Peptidase M14, carboxypeptidase A GO:0004181|GO:0006508|GO:0008270 CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 Gene3D G3DSA:2.160.20.20 132 626 2.7E-52 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 516 974 1.3E-124 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 SUPERFAMILY SSF103515 662 974 1.07E-49 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 SUPERFAMILY SSF51126 170 623 2.29E-32 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 Pfam PF03797 Autotransporter beta-domain 697 952 2.5E-53 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 SMART SM00869 694 963 5.7E-46 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS13250 54bc9f309a397934d51b4f2b45c46ab7 974 Gene3D G3DSA:2.40.128.130 652 974 1.8E-52 T 28-03-2018 CI104_RS27245 f2319bfa5c5c012567073b0f3528efd1 401 Pfam PF12704 MacB-like periplasmic core domain 19 256 1.0E-13 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS27245 f2319bfa5c5c012567073b0f3528efd1 401 Pfam PF02687 FtsX-like permease family 312 395 1.3E-8 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS01215 8ad3f5de298ba695eccec6a74ea39b0f 91 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 30 80 7.7E-9 T 28-03-2018 IPR012933 HicA mRNA interferase family GO:0003729 CI104_RS05980 11079fb7bf63e9bedff6fde8fd74ea15 255 SUPERFAMILY SSF52540 1 213 4.06E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05980 11079fb7bf63e9bedff6fde8fd74ea15 255 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS05980 11079fb7bf63e9bedff6fde8fd74ea15 255 Gene3D G3DSA:3.40.50.300 1 219 1.1E-59 T 28-03-2018 CI104_RS05980 11079fb7bf63e9bedff6fde8fd74ea15 255 SMART SM00382 26 205 2.2E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05980 11079fb7bf63e9bedff6fde8fd74ea15 255 Pfam PF00005 ABC transporter 17 156 2.0E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 SUPERFAMILY SSF50621 482 584 3.84E-7 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 ProSitePatterns PS00878 Orn/DAP/Arg decarboxylases family 2 pyridoxal-P attachment site. 124 142 - T 28-03-2018 IPR022653 Orn/DAP/Arg decarboxylase 2, pyridoxal-phosphate binding site CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 SUPERFAMILY SSF51419 92 369 2.43E-67 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 263 276 7.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 566 579 7.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 124 142 7.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 146 158 7.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01179 Ornithine/diaminopimelate/arginine (ODA) decarboxylase family signature 357 376 7.6E-19 T 28-03-2018 IPR000183 Ornithine/DAP/Arg decarboxylase GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 Gene3D G3DSA:2.40.37.10 423 604 1.1E-62 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 Gene3D G3DSA:2.40.37.10 22 114 1.4E-13 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 196 217 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 488 509 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 170 185 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 220 242 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 347 364 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 116 130 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 566 587 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 513 538 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PRINTS PR01180 Arginine decarboxylase signature 92 107 2.9E-74 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 ProSitePatterns PS00879 Orn/DAP/Arg decarboxylases family 2 signature 2. 301 314 - T 28-03-2018 IPR022657 Orn/DAP/Arg decarboxylase 2, conserved site CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 Pfam PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain 100 367 2.3E-72 T 28-03-2018 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal GO:0003824 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 Gene3D G3DSA:3.20.20.10 115 369 3.1E-33 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 Hamap MF_01417 Biosynthetic arginine decarboxylase [speA]. 28 657 43.52 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 TIGRFAM TIGR01273 speA: arginine decarboxylase 31 656 3.2E-279 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS04260 c93bd7d5d15c2fef3671146b9b698849 658 PIRSF PIRSF001336 17 658 7.2E-257 T 28-03-2018 IPR002985 Arginine decarboxylase GO:0006527|GO:0008295|GO:0008792 KEGG: 00330+4.1.1.19|MetaCyc: PWY-40|MetaCyc: PWY-43|MetaCyc: PWY-6305|MetaCyc: PWY-6834 CI104_RS13185 30d684f1f1bf49c8a3a989d13a8d0819 161 Pfam PF00866 Ring hydroxylating beta subunit 14 153 2.1E-44 T 28-03-2018 IPR000391 Ring-hydroxylating dioxygenase beta subunit GO:0003824|GO:0006725|GO:0055114 CI104_RS13185 30d684f1f1bf49c8a3a989d13a8d0819 161 SUPERFAMILY SSF54427 2 161 1.51E-53 T 28-03-2018 IPR032710 NTF2-like domain CI104_RS13185 30d684f1f1bf49c8a3a989d13a8d0819 161 TIGRFAM TIGR03232 benzo_1_2_benB: benzoate 1,2-dioxygenase, small subunit 7 161 8.7E-71 T 28-03-2018 IPR017641 Benzoate 1,2-dioxygenase, small subunit GO:0016708|GO:0055114 CI104_RS13185 30d684f1f1bf49c8a3a989d13a8d0819 161 Gene3D G3DSA:3.10.450.50 1 161 9.6E-33 T 28-03-2018 CI104_RS22640 601633f2deb705a71d0f0bed4377f82e 105 Pfam PF00893 Small Multidrug Resistance protein 1 93 6.6E-33 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS22640 601633f2deb705a71d0f0bed4377f82e 105 SUPERFAMILY SSF103481 5 103 2.75E-21 T 28-03-2018 CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 SMART SM00420 6 58 2.1E-18 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 Pfam PF08220 DeoR-like helix-turn-helix domain 6 61 7.3E-19 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 SMART SM01134 72 233 3.1E-72 T 28-03-2018 CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 Gene3D G3DSA:1.10.10.10 1 61 1.6E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 SUPERFAMILY SSF100950 76 234 4.78E-36 T 28-03-2018 CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 Pfam PF00455 DeoR C terminal sensor domain 74 231 2.1E-52 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 SUPERFAMILY SSF46785 4 63 3.53E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19740 53b08728fcc952730a36cfd10e600e3e 257 Gene3D G3DSA:3.40.50.1360 66 232 3.0E-38 T 28-03-2018 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 SUPERFAMILY SSF53774 23 347 2.09E-109 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 ProSitePatterns PS00917 Asparaginase / glutaminase active site signature 2. 104 114 - T 28-03-2018 IPR027475 Asparaginase/glutaminase, active site 2 Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 Gene3D G3DSA:3.40.50.40 235 347 1.6E-31 T 28-03-2018 IPR027473 L-asparaginase, C-terminal domain Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 Pfam PF00710 Asparaginase, N-terminal 25 216 7.3E-64 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 PRINTS PR00139 Asparaginase/glutaminase family signature 103 121 5.5E-23 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 PRINTS PR00139 Asparaginase/glutaminase family signature 26 37 5.5E-23 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 PRINTS PR00139 Asparaginase/glutaminase family signature 282 300 5.5E-23 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 PIRSF PIRSF500176 22 348 1.6E-83 T 28-03-2018 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 SMART SM00870 25 342 1.8E-146 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 Gene3D G3DSA:3.40.50.1170 21 231 1.1E-64 T 28-03-2018 IPR027474 L-asparaginase, N-terminal Reactome: R-HSA-70614 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 TIGRFAM TIGR00520 asnASE_II: L-asparaginase, type II 1 348 1.4E-165 T 28-03-2018 IPR004550 L-asparaginase, type II GO:0004067|GO:0006528 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 ProSitePatterns PS00144 Asparaginase / glutaminase active site signature 1. 28 36 - T 28-03-2018 IPR020827 Asparaginase/glutaminase, active site 1 GO:0006520 CI104_RS04170 1328df37a7f056e8147e1a3649de0719 348 PIRSF PIRSF001220 20 348 1.6E-93 T 28-03-2018 IPR006034 Asparaginase/glutaminase-like Reactome: R-HSA-70614 CI104_RS16215 cb326d3f8a2010ba378fde3d04b28714 116 Pfam PF02288 Dehydratase medium subunit 8 111 2.4E-31 T 28-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CI104_RS16215 cb326d3f8a2010ba378fde3d04b28714 116 Gene3D G3DSA:3.40.50.10150 5 115 2.9E-40 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CI104_RS16215 cb326d3f8a2010ba378fde3d04b28714 116 SUPERFAMILY SSF52968 4 114 1.06E-36 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CI104_RS16215 cb326d3f8a2010ba378fde3d04b28714 116 PIRSF PIRSF011503 1 114 2.7E-44 T 28-03-2018 IPR009192 Diol/glycerol dehydratase reactivating factor, small subunit CI104_RS07525 083e255c75b733124adfc9eb69f9b910 370 Pfam PF01098 Cell cycle protein 21 364 1.4E-124 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CI104_RS07525 083e255c75b733124adfc9eb69f9b910 370 TIGRFAM TIGR02210 rodA_shape: rod shape-determining protein RodA 17 364 1.0E-136 T 28-03-2018 IPR011923 Rod shape-determining protein RodA GO:0008360|GO:0016021 CI104_RS07525 083e255c75b733124adfc9eb69f9b910 370 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 321 345 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CI104_RS07095 c61152c156a3516991cc840d957c056c 190 Pfam PF00196 Bacterial regulatory proteins, luxR family 134 179 3.6E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07095 c61152c156a3516991cc840d957c056c 190 SMART SM00421 130 186 0.0073 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07095 c61152c156a3516991cc840d957c056c 190 SUPERFAMILY SSF46894 128 179 1.8E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS07095 c61152c156a3516991cc840d957c056c 190 Gene3D G3DSA:1.10.10.10 65 184 1.5E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22440 438db64e901a9d67659bf5c6ad3c785b 291 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 6 281 5.1E-149 T 28-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CI104_RS22440 438db64e901a9d67659bf5c6ad3c785b 291 SUPERFAMILY SSF51658 21 271 2.36E-56 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS22440 438db64e901a9d67659bf5c6ad3c785b 291 Pfam PF01261 Xylose isomerase-like TIM barrel 25 230 6.6E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS22440 438db64e901a9d67659bf5c6ad3c785b 291 Gene3D G3DSA:3.20.20.150 1 284 3.4E-61 T 28-03-2018 CI104_RS02610 5fdbbcafc2dffbc7c4a19b279165812c 229 Gene3D G3DSA:3.20.20.70 1 229 7.4E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS02610 5fdbbcafc2dffbc7c4a19b279165812c 229 SUPERFAMILY SSF51366 14 224 3.77E-53 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS02610 5fdbbcafc2dffbc7c4a19b279165812c 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 35 226 1.1E-88 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CI104_RS02610 5fdbbcafc2dffbc7c4a19b279165812c 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 11 225 36.3 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 SMART SM00382 506 694 5.9E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 Pfam PF00005 ABC transporter 497 646 1.3E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 Gene3D G3DSA:1.20.1560.10 161 446 6.2E-20 T 28-03-2018 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 Gene3D G3DSA:3.40.50.300 447 699 6.1E-51 T 28-03-2018 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 SUPERFAMILY SSF90123 166 463 2.09E-32 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 Gene3D G3DSA:3.90.70.10 9 140 7.4E-27 T 28-03-2018 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 Pfam PF03412 Peptidase C39 family 8 134 2.5E-25 T 28-03-2018 IPR005074 Peptidase C39, bacteriocin processing GO:0005524|GO:0006508|GO:0008233|GO:0016021 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 SUPERFAMILY SSF52540 477 695 4.05E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 Pfam PF00664 ABC transporter transmembrane region 170 431 2.8E-10 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS22860 a90cf2127a6aa43f25b8bf2ae902ca99 702 ProSitePatterns PS00211 ABC transporters family signature. 618 632 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 Pfam PF00085 Thioredoxin 7 108 2.8E-18 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 Gene3D G3DSA:1.25.40.10 197 284 3.7E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 Gene3D G3DSA:1.25.40.10 124 196 1.5E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 SUPERFAMILY SSF48452 115 246 1.88E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 SUPERFAMILY SSF52833 2 112 7.84E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS06930 330d371beea00e0afce07c728a15997d 284 Gene3D G3DSA:3.40.30.10 1 123 1.4E-28 T 28-03-2018 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 Pfam PF14561 Tetratricopeptide repeat 195 284 1.0E-27 T 28-03-2018 CI104_RS06930 330d371beea00e0afce07c728a15997d 284 Pfam PF14559 Tetratricopeptide repeat 124 190 1.2E-21 T 28-03-2018 CI104_RS21025 d973fe3f73a66b1941ac497c26710f1e 135 ProDom PD083358 MEMBRANE YGFX INNER SIMILAR ECS3768 Y3281 ESCHERICHIA TRANSMEMBRANE YPO0896A STY3202 19 131 1.0E-52 T 28-03-2018 IPR009883 Inner membrane protein YgfX CI104_RS21025 d973fe3f73a66b1941ac497c26710f1e 135 Pfam PF07254 Membrane-bound toxin component of toxin-antitoxin system 2 128 2.4E-54 T 28-03-2018 IPR009883 Inner membrane protein YgfX CI104_RS21025 d973fe3f73a66b1941ac497c26710f1e 135 PIRSF PIRSF020653 1 135 4.7E-73 T 28-03-2018 IPR009883 Inner membrane protein YgfX CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 SUPERFAMILY SSF54719 95 204 7.2E-45 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 ProSitePatterns PS00088 Manganese and iron superoxide dismutases signature. 168 175 - T 28-03-2018 IPR019833 Manganese/iron superoxide dismutase, binding site GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 PIRSF PIRSF000349 1 206 2.8E-80 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 SUPERFAMILY SSF46609 1 90 4.58E-37 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 Pfam PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain 2 89 1.4E-33 T 28-03-2018 IPR019831 Manganese/iron superoxide dismutase, N-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 Gene3D G3DSA:1.10.287.990 20 90 5.8E-31 T 28-03-2018 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 Pfam PF02777 Iron/manganese superoxide dismutases, C-terminal domain 96 201 3.0E-40 T 28-03-2018 IPR019832 Manganese/iron superoxide dismutase, C-terminal GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 PRINTS PR01703 Manganese superoxide dismutase signature 27 40 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 PRINTS PR01703 Manganese superoxide dismutase signature 124 132 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 PRINTS PR01703 Manganese superoxide dismutase signature 6 17 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 PRINTS PR01703 Manganese superoxide dismutase signature 73 86 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS24250 f633851239995b46f41e4c8e5cc7a832 206 PRINTS PR01703 Manganese superoxide dismutase signature 166 178 2.7E-27 T 28-03-2018 IPR001189 Manganese/iron superoxide dismutase GO:0004784|GO:0006801|GO:0046872|GO:0055114 MetaCyc: PWY-6854|Reactome: R-HSA-2151201|Reactome: R-HSA-3299685|Reactome: R-HSA-8862803 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 245 287 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 SMART SM00342 208 291 5.0E-24 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 SUPERFAMILY SSF46689 192 241 7.37E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 Pfam PF12833 Helix-turn-helix domain 214 292 3.5E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 Gene3D G3DSA:2.60.120.10 118 245 2.8E-15 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 Gene3D G3DSA:1.10.10.60 246 295 8.6E-10 T 28-03-2018 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 SUPERFAMILY SSF46689 245 293 2.64E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS07970 c76e1e69235ff8c580f98c163be2960c 297 Pfam PF10114 Sensory domain found in PocR 16 162 9.5E-33 T 28-03-2018 IPR018771 PocR domain CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 Gene3D G3DSA:3.30.1330.60 415 553 4.9E-35 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 SUPERFAMILY SSF103473 11 67 7.72E-5 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 SUPERFAMILY SSF103473 195 277 7.72E-5 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 SUPERFAMILY SSF103088 412 539 6.02E-33 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 Pfam PF00691 OmpA family 438 534 1.0E-16 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 Gene3D G3DSA:1.20.1250.20 195 358 0.036 T 28-03-2018 CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 PRINTS PR01021 OMPA domain signature 469 484 1.2E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 PRINTS PR01021 OMPA domain signature 439 461 1.2E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS09685 3b20356ca622a1d30e4c07a44b0052d5 569 PRINTS PR01021 OMPA domain signature 484 500 1.2E-8 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 Gene3D G3DSA:1.10.1040.10 163 294 1.5E-26 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 6 19 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 165 284 2.5E-25 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 SUPERFAMILY SSF48179 164 292 2.83E-31 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 PIRSF PIRSF000103 1 295 4.3E-98 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 Gene3D G3DSA:3.40.50.720 1 162 2.6E-31 T 28-03-2018 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 160 3.1E-45 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 SUPERFAMILY SSF51735 3 160 1.1E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS24475 6ac0e79f2a0b28d3a9bd4853a0eb0f81 296 Hamap MF_01913 3-sulfolactaldehyde reductase. 1 292 61.595 T 28-03-2018 IPR030876 3-sulfolactaldehyde reductase GO:0061596|GO:1902777 KEGG: 00020+1.1.1.37|KEGG: 00270+1.1.1.37|KEGG: 00620+1.1.1.37|KEGG: 00630+1.1.1.37|KEGG: 00680+1.1.1.37|KEGG: 00710+1.1.1.37|KEGG: 00720+1.1.1.37|MetaCyc: PWY-1622|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7115|MetaCyc: PWY-7383|MetaCyc: PWY-7446 CI104_RS13490 afa781660e8c86a6180d0cd5ab6ac417 181 Gene3D G3DSA:3.40.630.30 2 177 2.0E-25 T 28-03-2018 CI104_RS13490 afa781660e8c86a6180d0cd5ab6ac417 181 SUPERFAMILY SSF55729 8 175 1.47E-41 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS13490 afa781660e8c86a6180d0cd5ab6ac417 181 Pfam PF13302 Acetyltransferase (GNAT) domain 11 151 1.4E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS18085 45ed816745b94efc8f7d75d7ba07a583 112 Pfam PF14282 FlxA-like protein 17 104 1.3E-19 T 28-03-2018 IPR025577 FlxA-like protein CI104_RS18085 45ed816745b94efc8f7d75d7ba07a583 112 Gene3D G3DSA:3.90.20.10 13 99 7.6E-4 T 28-03-2018 CI104_RS07580 3a1256c0008c1f590c5c1b4a92aac842 311 Gene3D G3DSA:3.90.245.10 2 311 1.5E-115 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS07580 3a1256c0008c1f590c5c1b4a92aac842 311 Hamap MF_01431 Pyrimidine-specific ribonucleoside hydrolase RihA [rihA]. 1 311 80.491 T 28-03-2018 IPR022975 Pyrimidine-specific ribonucleoside hydrolase RihA GO:0005737|GO:0006206|GO:0008152|GO:0015949|GO:0016787|GO:0016798|GO:0045437 CI104_RS07580 3a1256c0008c1f590c5c1b4a92aac842 311 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 4 301 2.1E-91 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS07580 3a1256c0008c1f590c5c1b4a92aac842 311 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 8 18 - T 28-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CI104_RS07580 3a1256c0008c1f590c5c1b4a92aac842 311 SUPERFAMILY SSF53590 4 308 8.63E-107 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 Pfam PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain 102 147 2.5E-17 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 SUPERFAMILY SSF54893 2 100 9.03E-35 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 Hamap MF_00002 Aspartate carbamoyltransferase regulatory chain [pyrI]. 4 152 32.139 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 ProDom PD006194 REGULATORY ASPARTATE CARBAMOYLTRANSFERASE CHAIN METAL-BINDING ZINC PYRIMIDINE BIOSYNTHESIS SUBUNIT TRANSFERASE 9 99 2.0E-39 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 Gene3D G3DSA:3.30.70.140 5 97 5.6E-34 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 TIGRFAM TIGR00240 ATCase_reg: aspartate carbamoyltransferase, regulatory subunit 5 152 1.2E-69 T 28-03-2018 IPR002801 Aspartate transcarbamylase regulatory subunit GO:0006207|GO:0009347 CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 Gene3D G3DSA:2.30.30.20 102 150 5.7E-18 T 28-03-2018 CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 SUPERFAMILY SSF57825 102 150 1.16E-14 T 28-03-2018 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CI104_RS22090 23ed548ce9f0da034e75d17394983d21 153 Pfam PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain 7 96 1.1E-29 T 28-03-2018 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CI104_RS24770 a630549718a70e50fb9ece84a762e436 155 SUPERFAMILY SSF54637 12 154 6.9E-25 T 28-03-2018 IPR029069 HotDog domain CI104_RS24770 a630549718a70e50fb9ece84a762e436 155 TIGRFAM TIGR00369 unchar_dom_1: uncharacterized domain 1 25 153 1.5E-14 T 28-03-2018 IPR003736 Phenylacetic acid degradation-related domain Reactome: R-HSA-77289 CI104_RS24770 a630549718a70e50fb9ece84a762e436 155 Gene3D G3DSA:3.10.129.10 7 154 3.0E-28 T 28-03-2018 CI104_RS24770 a630549718a70e50fb9ece84a762e436 155 Pfam PF03061 Thioesterase superfamily 57 145 2.2E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CI104_RS18395 d78bd69159c7babcae1ba1da883fec92 344 Hamap MF_00924 Outer membrane protein assembly factor BamC [bamC]. 9 343 38.487 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC CI104_RS18395 d78bd69159c7babcae1ba1da883fec92 344 PIRSF PIRSF026343 9 344 4.6E-142 T 28-03-2018 IPR014524 Outer membrane protein assembly factor BamC CI104_RS18395 d78bd69159c7babcae1ba1da883fec92 344 Pfam PF06804 NlpB/DapX lipoprotein 40 342 3.2E-110 T 28-03-2018 IPR010653 NlpB/DapX lipoprotein CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 Gene3D G3DSA:3.20.20.140 422 553 2.0E-42 T 28-03-2018 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 Gene3D G3DSA:3.20.20.140 143 421 3.9E-163 T 28-03-2018 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 SUPERFAMILY SSF51338 1 177 8.23E-65 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 Pfam PF01979 Amidohydrolase family 125 453 2.8E-83 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 Gene3D G3DSA:2.30.40.10 65 142 1.7E-16 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 334 350 1.1E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 295 312 1.1E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 427 440 1.1E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 PRINTS PR01752 Urea amidohydrolase (urease) protein signature 401 416 1.1E-34 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 ProSitePatterns PS00145 Urease active site. 317 333 - T 28-03-2018 IPR017950 Urease active site GO:0009039 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 Pfam PF00449 Urease alpha-subunit, N-terminal domain 3 119 6.2E-56 T 28-03-2018 IPR011612 Urease alpha-subunit, N-terminal domain KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 ProSitePatterns PS01120 Urease nickel ligands signature. 127 140 - T 28-03-2018 IPR029754 Urease nickel binding site GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 Hamap MF_01953 Urease subunit alpha [ureC]. 2 567 56.718 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 TIGRFAM TIGR01792 urease_alph: urease, alpha subunit 3 567 6.7E-294 T 28-03-2018 IPR005848 Urease, alpha subunit GO:0006807|GO:0009039|GO:0016151 KEGG: 00220+3.5.1.5|KEGG: 00230+3.5.1.5|KEGG: 00791+3.5.1.5|MetaCyc: PWY-5704 CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 SUPERFAMILY SSF51556 130 431 1.75E-197 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 SUPERFAMILY SSF51556 480 567 1.75E-197 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS03700 6add5462fef01dfa6b1d2b322b551c5b 567 SUPERFAMILY SSF51338 414 477 1.21E-6 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS08320 497f58a3497987879f89de357e33e766 81 Gene3D G3DSA:3.10.20.30 1 81 2.4E-20 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS08320 497f58a3497987879f89de357e33e766 81 TIGRFAM TIGR01682 moaD: molybdopterin converting factor, subunit 1 2 81 3.8E-25 T 28-03-2018 IPR010034 Molybdopterin converting factor, subunit 1 GO:0006777 Reactome: R-HSA-947581 CI104_RS08320 497f58a3497987879f89de357e33e766 81 Pfam PF02597 ThiS family 4 81 3.0E-22 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CI104_RS08320 497f58a3497987879f89de357e33e766 81 SUPERFAMILY SSF54285 1 81 8.6E-24 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 198 421 6.0E-61 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 194 206 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 113 133 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 97 110 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 168 179 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 142 159 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 6 21 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 PRINTS PR00732 Glycosyl hydrolase family 4 signature 75 91 1.0E-41 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 142 173 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 Gene3D G3DSA:3.90.1820.10 2 314 1.4E-68 T 28-03-2018 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 Gene3D G3DSA:3.90.1820.10 315 451 3.0E-38 T 28-03-2018 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 Pfam PF02056 Family 4 glycosyl hydrolase 6 188 5.1E-79 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 SUPERFAMILY SSF51735 5 171 1.03E-51 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS22985 a4554a613f20f2a41e35172625ef019d 451 SUPERFAMILY SSF56327 172 449 4.68E-70 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CI104_RS07115 d9ed075e3ae41a2b87b66f7721962ee3 462 Pfam PF00324 Amino acid permease 31 461 3.3E-118 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS07115 d9ed075e3ae41a2b87b66f7721962ee3 462 ProSitePatterns PS00218 Amino acid permeases signature. 56 86 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS07115 d9ed075e3ae41a2b87b66f7721962ee3 462 PIRSF PIRSF006060 3 462 5.4E-77 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS07060 a778b735714e1cdcb8d8cb70f9c84787 460 Pfam PF02321 Outer membrane efflux protein 274 455 1.4E-26 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS07060 a778b735714e1cdcb8d8cb70f9c84787 460 Pfam PF02321 Outer membrane efflux protein 64 247 1.7E-20 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS07060 a778b735714e1cdcb8d8cb70f9c84787 460 Gene3D G3DSA:1.20.1600.10 18 460 6.4E-93 T 28-03-2018 CI104_RS07060 a778b735714e1cdcb8d8cb70f9c84787 460 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 11 457 7.7E-110 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CI104_RS07060 a778b735714e1cdcb8d8cb70f9c84787 460 SUPERFAMILY SSF56954 2 458 4.19E-102 T 28-03-2018 CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 Gene3D G3DSA:3.40.50.300 807 1031 1.1E-16 T 28-03-2018 CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 Pfam PF13558 Putative exonuclease SbcCD, C subunit 930 1001 4.8E-15 T 28-03-2018 CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 Gene3D G3DSA:3.40.50.300 1 233 9.8E-34 T 28-03-2018 CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 Pfam PF13476 AAA domain 5 206 1.2E-25 T 28-03-2018 CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 TIGRFAM TIGR00618 sbcc: exonuclease SbcC 1 1039 0.0 T 28-03-2018 IPR004592 Nuclease SbcC, gammaproteobacteria type CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 SUPERFAMILY SSF52540 1 219 5.05E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 SUPERFAMILY SSF52540 834 1034 5.05E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 SUPERFAMILY SSF52540 292 402 8.23E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06120 531fd3ba16a9d00cfd653f72137da5ce 1047 SUPERFAMILY SSF52540 30 57 8.23E-5 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 Pfam PF00270 DEAD/DEAH box helicase 28 198 4.1E-47 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 Hamap MF_00967 ATP-dependent RNA helicase SrmB [srmB]. 4 426 49.645 T 28-03-2018 IPR028621 ATP-dependent RNA helicase SrmB GO:0000027|GO:0004004 CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 SUPERFAMILY SSF52540 76 361 1.38E-68 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 SMART SM00490 262 343 1.3E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 Pfam PF00271 Helicase conserved C-terminal domain 235 343 6.0E-30 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 SMART SM00487 23 223 8.9E-59 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 Gene3D G3DSA:3.40.50.300 1 225 1.5E-59 T 28-03-2018 CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 155 163 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CI104_RS18865 752229fa57d5fd14b38afa032917891e 442 Gene3D G3DSA:3.40.50.300 226 442 2.9E-47 T 28-03-2018 CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 Hamap MF_00693 Probable transcriptional regulatory protein YebC [yebC]. 1 237 29.624 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 Hamap MF_00918 Probable transcriptional regulatory protein YeeN [yeeN]. 1 238 56.006 T 28-03-2018 IPR026562 Probable transcriptional regulatory protein YeeN CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 SUPERFAMILY SSF75625 2 235 6.8E-76 T 28-03-2018 IPR029072 YebC-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 Gene3D G3DSA:1.10.10.200 2 76 3.2E-24 T 28-03-2018 IPR017856 Integrase, N-terminal zinc-binding domain-like CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 TIGRFAM TIGR01033 TIGR01033: DNA-binding regulatory protein, YebC/PmpR family 2 235 5.7E-64 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 Pfam PF01709 Transcriptional regulator 4 235 4.1E-77 T 28-03-2018 IPR002876 Transcriptional regulator TACO1-like Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 Gene3D G3DSA:3.30.70.980 80 175 2.7E-23 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS05795 9d798573d0197f51273633a2c74416f8 238 Gene3D G3DSA:3.30.70.980 181 236 5.1E-7 T 28-03-2018 IPR026564 Transcriptional regulator TACO1-like, domain 3 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 Hamap MF_00298 RNA pyrophosphohydrolase [rppH]. 1 156 37.968 T 28-03-2018 IPR022927 RNA pyrophosphohydrolase RppH CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 PRINTS PR00502 NUDIX hydrolase family signature 33 47 2.5E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 PRINTS PR00502 NUDIX hydrolase family signature 47 62 2.5E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 Gene3D G3DSA:3.90.79.10 1 164 3.6E-35 T 28-03-2018 CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 SUPERFAMILY SSF55811 5 159 6.63E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS20365 faa8aecf8ba7da5682359e8e7370eb0a 176 Pfam PF00293 NUDIX domain 7 146 5.3E-27 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SUPERFAMILY SSF56784 536 687 1.92E-37 T 28-03-2018 IPR023214 HAD-like domain CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SUPERFAMILY SSF81660 344 547 4.36E-43 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SMART SM00831 48 121 2.9E-5 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 771 787 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 305 324 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 751 764 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 701 716 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 288 304 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 856 877 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 409 422 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 719 730 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 PRINTS PR01836 Magnesium-transporting ATPase signature 806 827 1.4E-84 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SUPERFAMILY SSF81665 276 369 6.15E-103 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SUPERFAMILY SSF81665 692 900 6.15E-103 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SUPERFAMILY SSF81665 51 159 6.15E-103 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Gene3D G3DSA:1.20.1110.10 566 897 2.5E-57 T 28-03-2018 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 610 732 1.6E-31 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 127 410 2.9E-38 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 371 657 3.2E-19 T 28-03-2018 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Gene3D G3DSA:2.70.150.10 57 276 1.5E-43 T 28-03-2018 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 TIGRFAM TIGR01524 ATPase-IIIB_Mg: magnesium-translocating P-type ATPase 40 902 0.0 T 28-03-2018 IPR006415 P-type ATPase, subfamily IIIB GO:0015444|GO:0015693|GO:0016021 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 SUPERFAMILY SSF81653 172 274 1.96E-27 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 60 116 1.1E-13 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Pfam PF00122 E1-E2 ATPase 164 355 1.0E-44 T 28-03-2018 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Gene3D G3DSA:3.40.1110.10 337 550 8.1E-41 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 Pfam PF00689 Cation transporting ATPase, C-terminus 726 892 2.3E-14 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CI104_RS22115 2b3f062e7d2a1368cd9a01259167eebd 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 377 383 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CI104_RS01965 7eab43b5bf468377aa1b164beb2126a9 198 Gene3D G3DSA:3.10.50.40 1 164 1.2E-29 T 28-03-2018 CI104_RS01965 7eab43b5bf468377aa1b164beb2126a9 198 Pfam PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase 5 136 2.7E-9 T 28-03-2018 IPR001179 FKBP-type peptidyl-prolyl cis-trans isomerase domain CI104_RS01965 7eab43b5bf468377aa1b164beb2126a9 198 SUPERFAMILY SSF54534 2 140 2.16E-33 T 28-03-2018 CI104_RS10405 6d8ebddbc4809dbfb90a990549e4195e 140 SUPERFAMILY SSF140566 1 113 9.15E-15 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CI104_RS10405 6d8ebddbc4809dbfb90a990549e4195e 140 Pfam PF05130 FlgN protein 1 129 9.7E-19 T 28-03-2018 IPR007809 FlgN-like protein GO:0005515|GO:0044780 CI104_RS10405 6d8ebddbc4809dbfb90a990549e4195e 140 Gene3D G3DSA:1.20.58.300 1 114 9.0E-19 T 28-03-2018 CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 TIGRFAM TIGR02135 phoU_full: phosphate transport system regulatory protein PhoU 13 221 3.8E-72 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 Pfam PF01895 PhoU domain 27 111 8.9E-21 T 28-03-2018 IPR026022 PhoU domain CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 Pfam PF01895 PhoU domain 128 213 2.0E-17 T 28-03-2018 IPR026022 PhoU domain CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 PIRSF PIRSF003107 7 226 3.0E-67 T 28-03-2018 IPR028366 Phosphate transport system protein PhoU GO:0005737|GO:0030643|GO:0045936 CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 Gene3D G3DSA:1.20.58.220 6 119 2.1E-27 T 28-03-2018 CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 Gene3D G3DSA:1.20.58.220 120 238 7.5E-26 T 28-03-2018 CI104_RS25225 24dab8e63d8c6cd78ceac8fe81cfe379 241 SUPERFAMILY SSF109755 13 229 3.24E-70 T 28-03-2018 CI104_RS21375 2ba0615d6ca5ea28e9c05bc8b36ba899 716 Pfam PF02554 Carbon starvation protein CstA 34 405 3.2E-161 T 28-03-2018 IPR003706 CstA, N-terminal domain GO:0009267|GO:0016020 CI104_RS21375 2ba0615d6ca5ea28e9c05bc8b36ba899 716 Pfam PF13722 5TM C-terminal transporter carbon starvation CstA 486 614 1.8E-34 T 28-03-2018 IPR025299 CstA, C-terminal domain CI104_RS20610 76e2a08b2b85fd36ef2365039acd1bd2 191 SUPERFAMILY SSF102405 1 179 5.19E-61 T 28-03-2018 CI104_RS20610 76e2a08b2b85fd36ef2365039acd1bd2 191 Pfam PF03641 Possible lysine decarboxylase 46 174 5.0E-38 T 28-03-2018 IPR031100 LOG family CI104_RS20610 76e2a08b2b85fd36ef2365039acd1bd2 191 Gene3D G3DSA:3.40.50.450 2 191 3.0E-58 T 28-03-2018 CI104_RS20610 76e2a08b2b85fd36ef2365039acd1bd2 191 TIGRFAM TIGR00730 TIGR00730: TIGR00730 family protein 2 179 1.2E-56 T 28-03-2018 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CI104_RS22155 b4086af5383e285ce732e0fbac8f3814 372 Gene3D G3DSA:3.40.640.10 42 247 1.3E-19 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS22155 b4086af5383e285ce732e0fbac8f3814 372 SUPERFAMILY SSF53383 6 367 1.05E-33 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS22155 b4086af5383e285ce732e0fbac8f3814 372 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 4 365 2.8E-183 T 28-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CI104_RS22155 b4086af5383e285ce732e0fbac8f3814 372 Pfam PF03841 L-seryl-tRNA selenium transferase 14 322 1.4E-14 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CI104_RS08445 3c7c7c09542ee2a4e6a6e6906873a123 746 SUPERFAMILY SSF82689 627 722 4.45E-8 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CI104_RS08445 3c7c7c09542ee2a4e6a6e6906873a123 746 SUPERFAMILY SSF50182 558 616 1.28E-9 T 28-03-2018 IPR010920 LSM domain CI104_RS08445 3c7c7c09542ee2a4e6a6e6906873a123 746 Pfam PF00924 Mechanosensitive ion channel 515 713 1.1E-42 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CI104_RS08445 3c7c7c09542ee2a4e6a6e6906873a123 746 Gene3D G3DSA:3.30.70.100 623 720 1.1E-5 T 28-03-2018 CI104_RS08445 3c7c7c09542ee2a4e6a6e6906873a123 746 Gene3D G3DSA:2.30.30.60 575 622 5.1E-6 T 28-03-2018 CI104_RS08445 3c7c7c09542ee2a4e6a6e6906873a123 746 SUPERFAMILY SSF82861 477 556 4.18E-12 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CI104_RS03645 507b7fc2dccc2aa03a95c4e89ce1376f 168 SMART SM00987 3 160 0.0036 T 28-03-2018 CI104_RS03645 507b7fc2dccc2aa03a95c4e89ce1376f 168 SUPERFAMILY SSF52141 2 163 2.92E-44 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS03645 507b7fc2dccc2aa03a95c4e89ce1376f 168 Hamap MF_01956 G/U mismatch-specific DNA glycosylase [mug]. 1 168 47.528 T 28-03-2018 IPR023502 G/U mismatch-specific DNA glycosylase, bacterial GO:0006281|GO:0019104 CI104_RS03645 507b7fc2dccc2aa03a95c4e89ce1376f 168 Gene3D G3DSA:3.40.470.10 4 164 9.7E-50 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS03645 507b7fc2dccc2aa03a95c4e89ce1376f 168 SMART SM00986 3 160 0.0036 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS03645 507b7fc2dccc2aa03a95c4e89ce1376f 168 Pfam PF03167 Uracil DNA glycosylase superfamily 6 159 7.5E-25 T 28-03-2018 IPR005122 Uracil-DNA glycosylase-like Reactome: R-HSA-110328|Reactome: R-HSA-110329|Reactome: R-HSA-110357 CI104_RS26730 38d9e4b6e4429043cb49e5bb5debcca6 194 Gene3D G3DSA:1.10.357.10 1 194 3.1E-29 T 28-03-2018 CI104_RS26730 38d9e4b6e4429043cb49e5bb5debcca6 194 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 57 1.2E-5 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS26730 38d9e4b6e4429043cb49e5bb5debcca6 194 SUPERFAMILY SSF46689 3 77 3.75E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 235 300 3.3E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 ProSitePatterns PS00211 ABC transporters family signature. 156 170 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 Gene3D G3DSA:3.40.50.300 2 327 6.3E-76 T 28-03-2018 CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 Pfam PF00005 ABC transporter 26 183 2.2E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 SUPERFAMILY SSF52540 5 255 2.92E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 SMART SM00382 34 232 1.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20800 0bef26c96697d220a66c479b57ce4a85 329 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 233 320 8.8E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 SUPERFAMILY SSF69349 544 718 4.87E-34 T 28-03-2018 CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 TIGRFAM TIGR01646 vgr_GE: Rhs element Vgr protein 137 607 3.3E-125 T 28-03-2018 IPR006533 Type VI secretion system, RhsGE-associated Vgr protein CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 SUPERFAMILY SSF69279 304 464 6.46E-37 T 28-03-2018 CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 Gene3D G3DSA:3.55.50.10 203 293 1.4E-29 T 28-03-2018 CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 TIGRFAM TIGR03361 VI_Rhs_Vgr: type VI secretion system Vgr family protein 111 624 6.7E-166 T 28-03-2018 IPR017847 Type VI secretion system, RhsGE-associated Vgr family subset CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 Pfam PF05954 Phage late control gene D protein (GPD) 125 433 3.7E-98 T 28-03-2018 CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 SUPERFAMILY SSF69279 111 288 8.08E-52 T 28-03-2018 CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 Gene3D G3DSA:2.40.50.230 472 554 1.0E-35 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS05675 5b5e030f016c2e6a8d809260569237e9 736 SUPERFAMILY SSF69255 466 554 1.1E-33 T 28-03-2018 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 SUPERFAMILY SSF50249 1 105 1.52E-34 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 Gene3D G3DSA:2.40.50.140 1 108 1.3E-26 T 28-03-2018 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 TIGRFAM TIGR00459 aspS_bact: aspartate--tRNA ligase 1 586 6.1E-278 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 190 202 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 518 532 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 207 220 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 PRINTS PR01042 Aspartyl-tRNA synthetase signature 474 490 1.2E-26 T 28-03-2018 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 Pfam PF00152 tRNA synthetases class II (D, K and N) 118 558 1.1E-107 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 Pfam PF02938 GAD domain 307 406 9.5E-32 T 28-03-2018 IPR029351 GAD domain Reactome: R-HSA-379726 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 SUPERFAMILY SSF55261 288 419 4.09E-47 T 28-03-2018 IPR004115 GAD-like domain GO:0004812|GO:0005524|GO:0005737 Reactome: R-HSA-379726 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 Pfam PF01336 OB-fold nucleic acid binding domain 18 102 5.8E-17 T 28-03-2018 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type GO:0003676 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 Hamap MF_00044 Aspartate--tRNA(Asp/Asn) ligase [aspS]. 1 584 33.681 T 28-03-2018 IPR004524 Aspartate-tRNA ligase, type 1 GO:0005524|GO:0016874 Reactome: R-HSA-379726 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 SUPERFAMILY SSF55681 108 287 4.02E-105 T 28-03-2018 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 SUPERFAMILY SSF55681 420 584 4.02E-105 T 28-03-2018 CI104_RS15385 1452ea7bda80e2c76ad36a7a5f204bae 595 Gene3D G3DSA:3.30.930.10 131 586 2.7E-102 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF10385 RNA polymerase beta subunit external 1 domain 591 656 3.0E-27 T 28-03-2018 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:3.90.1800.10 1267 1313 7.2E-12 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 151 225 2.0E-7 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF04561 RNA polymerase Rpb2, domain 2 340 454 1.3E-15 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF04565 RNA polymerase Rpb2, domain 3 513 580 1.5E-30 T 28-03-2018 IPR007645 RNA polymerase Rpb2, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 ProSitePatterns PS01166 RNA polymerases beta chain signature. 1063 1075 - T 28-03-2018 IPR007121 RNA polymerase, beta subunit, conserved site GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 TIGRFAM TIGR02013 rpoB: DNA-directed RNA polymerase, beta subunit 8 1339 0.0 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF04560 RNA polymerase Rpb2, domain 7 1266 1340 1.9E-27 T 28-03-2018 IPR007641 RNA polymerase Rpb2, domain 7 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Hamap MF_01321 DNA-directed RNA polymerase subunit beta [rpoB]. 13 1342 12.351 T 28-03-2018 IPR010243 DNA-directed RNA polymerase beta subunit, bacterial-type GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF00562 RNA polymerase Rpb2, domain 6 717 1264 7.6E-160 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 SUPERFAMILY SSF64484 343 939 0.0 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 SUPERFAMILY SSF64484 11 226 0.0 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 SUPERFAMILY SSF64484 1039 1341 0.0 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:2.40.270.10 1020 1242 7.8E-81 T 28-03-2018 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:2.40.50.100 715 795 1.6E-27 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:3.90.1100.10 430 645 7.2E-80 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:3.90.1100.10 646 713 2.2E-14 T 28-03-2018 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Pfam PF04563 RNA polymerase beta subunit 26 500 2.3E-58 T 28-03-2018 IPR007644 RNA polymerase, beta subunit, protrusion GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:3.90.1110.10 148 429 2.8E-67 T 28-03-2018 IPR007642 RNA polymerase Rpb2, domain 2 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23765 752ba8679d8e5c4480cc14bd368765cb 1342 Gene3D G3DSA:2.40.50.150 814 949 4.1E-29 T 28-03-2018 IPR014724 RNA polymerase Rpb2, OB-fold GO:0003899 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS21275 ecba4377a4786401a38368e81eab0cad 152 Gene3D G3DSA:3.90.960.10 1 150 4.0E-39 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS21275 ecba4377a4786401a38368e81eab0cad 152 Pfam PF04073 Aminoacyl-tRNA editing domain 25 139 2.5E-27 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS21275 ecba4377a4786401a38368e81eab0cad 152 SUPERFAMILY SSF55826 4 152 1.31E-40 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS04440 807f8e95779a6c682e0e0be555a82433 455 Pfam PF06123 Inner membrane protein CreD 6 427 1.4E-142 T 28-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CI104_RS04440 807f8e95779a6c682e0e0be555a82433 455 PIRSF PIRSF004548 1 452 5.5E-177 T 28-03-2018 IPR010364 Uncharacterised protein family, inner membrane CreD CI104_RS15455 6ce5152e48913eb5065ff648465a1a65 194 Gene3D G3DSA:2.60.40.1090 30 194 4.4E-28 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15455 6ce5152e48913eb5065ff648465a1a65 194 Pfam PF00419 Fimbrial protein 32 193 8.7E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15455 6ce5152e48913eb5065ff648465a1a65 194 SUPERFAMILY SSF49401 31 193 3.18E-22 T 28-03-2018 IPR008966 Adhesion domain CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 ProSitePatterns PS00369 PTS HPR domain histidine phosphorylation site signature. 169 176 - T 28-03-2018 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Gene3D G3DSA:3.50.30.10 388 477 1.6E-17 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 SUPERFAMILY SSF53062 1 128 1.57E-30 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 TIGRFAM TIGR02364 dha_pts: dihydroxyacetone kinase, phosphotransfer subunit 2 127 2.4E-40 T 28-03-2018 IPR012844 Dihydroxyacetone kinase phosphotransferase subunit, N-terminal domain CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 TIGRFAM TIGR01003 PTS_HPr_family: phosphocarrier, HPr family 159 235 6.6E-14 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Pfam PF05524 PEP-utilising enzyme, N-terminal 268 370 2.8E-18 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Gene3D G3DSA:1.10.274.10 270 387 5.9E-27 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 SUPERFAMILY SSF52009 370 473 3.4E-21 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 PRINTS PR00107 Phosphocarrier protein signature 209 226 2.6E-5 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 PRINTS PR00107 Phosphocarrier protein signature 169 185 2.6E-5 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 PRINTS PR00107 Phosphocarrier protein signature 194 209 2.6E-5 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Pfam PF00381 PTS HPr component phosphorylation site 160 237 2.3E-16 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Pfam PF00391 PEP-utilising enzyme, mobile domain 398 465 1.0E-15 T 28-03-2018 IPR008279 PEP-utilising enzyme, mobile domain GO:0016310|GO:0016772 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 SUPERFAMILY SSF55594 160 243 4.71E-19 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Gene3D G3DSA:3.40.50.510 1 145 1.5E-32 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Pfam PF03610 PTS system fructose IIA component 4 120 5.0E-26 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 SUPERFAMILY SSF47831 279 386 1.15E-28 T 28-03-2018 IPR008731 Phosphotransferase system, enzyme I N-terminal GO:0009401 CI104_RS14585 c184d1f0ebd0aaaf4443084487c2e8e2 477 Gene3D G3DSA:3.30.1340.10 158 243 2.1E-19 T 28-03-2018 IPR000032 Phosphocarrier protein HPr-like CI104_RS05900 8ce7a3c1e43b52b89c12fde73fc07442 483 Pfam PF03972 MmgE/PrpD family 18 462 2.0E-159 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 CI104_RS05900 8ce7a3c1e43b52b89c12fde73fc07442 483 Gene3D G3DSA:1.10.4100.10 390 483 7.9E-14 T 28-03-2018 CI104_RS05900 8ce7a3c1e43b52b89c12fde73fc07442 483 Gene3D G3DSA:1.10.4100.10 2 331 2.1E-102 T 28-03-2018 CI104_RS05900 8ce7a3c1e43b52b89c12fde73fc07442 483 SUPERFAMILY SSF103378 13 482 3.4E-160 T 28-03-2018 IPR005656 MmgE/PrpD GO:0016829 CI104_RS05900 8ce7a3c1e43b52b89c12fde73fc07442 483 TIGRFAM TIGR02330 prpD: 2-methylcitrate dehydratase 13 483 2.2E-274 T 28-03-2018 IPR012705 2-methylcitrate dehydratase PrpD GO:0019629|GO:0047547|GO:0051537 KEGG: 00640+4.2.1.79 CI104_RS24150 687163a45319e8ef99485458daa37a64 248 Gene3D G3DSA:2.40.30.10 1 95 2.4E-18 T 28-03-2018 CI104_RS24150 687163a45319e8ef99485458daa37a64 248 SUPERFAMILY SSF52343 103 248 5.5E-38 T 28-03-2018 CI104_RS24150 687163a45319e8ef99485458daa37a64 248 Pfam PF00970 Oxidoreductase FAD-binding domain 18 90 2.9E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CI104_RS24150 687163a45319e8ef99485458daa37a64 248 Pfam PF00175 Oxidoreductase NAD-binding domain 111 222 1.0E-18 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CI104_RS24150 687163a45319e8ef99485458daa37a64 248 Gene3D G3DSA:3.40.50.80 97 248 4.9E-25 T 28-03-2018 CI104_RS24150 687163a45319e8ef99485458daa37a64 248 SUPERFAMILY SSF63380 3 100 9.32E-26 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS21685 39796bad5ef18e9046353136aa5b0809 318 SUPERFAMILY SSF100950 67 315 2.26E-57 T 28-03-2018 CI104_RS21685 39796bad5ef18e9046353136aa5b0809 318 Gene3D G3DSA:3.40.50.1360 69 317 4.3E-34 T 28-03-2018 CI104_RS21685 39796bad5ef18e9046353136aa5b0809 318 Pfam PF04198 Putative sugar-binding domain 67 315 1.6E-68 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CI104_RS21685 39796bad5ef18e9046353136aa5b0809 318 Gene3D G3DSA:1.10.10.10 1 63 1.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20835 dc030029822d2d38110651806f510d2b 335 Gene3D G3DSA:3.40.190.10 120 330 4.1E-33 T 28-03-2018 CI104_RS20835 dc030029822d2d38110651806f510d2b 335 SUPERFAMILY SSF53850 25 246 1.58E-38 T 28-03-2018 CI104_RS20835 dc030029822d2d38110651806f510d2b 335 Pfam PF09084 NMT1/THI5 like 54 245 3.0E-16 T 28-03-2018 IPR015168 SsuA/THI5-like CI104_RS20835 dc030029822d2d38110651806f510d2b 335 SMART SM00062 26 242 6.0E-5 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS20835 dc030029822d2d38110651806f510d2b 335 Gene3D G3DSA:3.40.190.10 21 114 1.1E-11 T 28-03-2018 CI104_RS25145 2e1c46bd8a01bfded5eeae04f7cf5e54 207 SUPERFAMILY SSF53335 4 205 5.83E-43 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS25145 2e1c46bd8a01bfded5eeae04f7cf5e54 207 Hamap MF_00074 Ribosomal RNA small subunit methyltransferase G [rsmG]. 13 201 28.633 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CI104_RS25145 2e1c46bd8a01bfded5eeae04f7cf5e54 207 Pfam PF02527 rRNA small subunit methyltransferase G 20 200 1.9E-66 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CI104_RS25145 2e1c46bd8a01bfded5eeae04f7cf5e54 207 Gene3D G3DSA:3.40.50.150 1 207 1.3E-37 T 28-03-2018 CI104_RS25145 2e1c46bd8a01bfded5eeae04f7cf5e54 207 TIGRFAM TIGR00138 rsmG_gidB: 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG 25 202 3.5E-61 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CI104_RS25145 2e1c46bd8a01bfded5eeae04f7cf5e54 207 PIRSF PIRSF003078 1 207 1.5E-66 T 28-03-2018 IPR003682 rRNA small subunit methyltransferase G GO:0005737|GO:0006364|GO:0008649 CI104_RS10245 e0437e564ef2d941e579ddc8a527ef9c 129 Pfam PF10627 Curli assembly protein CsgE 27 128 5.6E-34 T 28-03-2018 IPR018900 Curli assembly protein CsgE CI104_RS24840 59b5cde7cad3cef3a3715668f77e1c4b 398 TIGRFAM TIGR00540 TPR_hemY_coli: heme biosynthesis-associated TPR protein 4 386 8.8E-118 T 28-03-2018 IPR005254 Heme biosynthesis-associated TPR protein GO:0016020|GO:0042168 CI104_RS24840 59b5cde7cad3cef3a3715668f77e1c4b 398 Gene3D G3DSA:1.25.40.10 83 209 2.4E-8 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS24840 59b5cde7cad3cef3a3715668f77e1c4b 398 SUPERFAMILY SSF48452 269 384 8.91E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS24840 59b5cde7cad3cef3a3715668f77e1c4b 398 SUPERFAMILY SSF48452 95 226 8.91E-10 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS24840 59b5cde7cad3cef3a3715668f77e1c4b 398 Pfam PF07219 HemY protein N-terminus 26 132 6.2E-36 T 28-03-2018 IPR010817 HemY, N-terminal CI104_RS24840 59b5cde7cad3cef3a3715668f77e1c4b 398 Gene3D G3DSA:1.25.40.10 210 390 6.1E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS02990 624f9004f024abbf649200860c6fbaab 196 Gene3D G3DSA:3.40.50.10490 1 196 2.4E-36 T 28-03-2018 CI104_RS02990 624f9004f024abbf649200860c6fbaab 196 Pfam PF13580 SIS domain 9 144 5.0E-33 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS02990 624f9004f024abbf649200860c6fbaab 196 SUPERFAMILY SSF53697 3 191 1.21E-50 T 28-03-2018 CI104_RS02990 624f9004f024abbf649200860c6fbaab 196 Hamap MF_01157 DnaA initiator-associating protein DiaA [diaA]. 1 196 61.612 T 28-03-2018 IPR023070 DnaA initiator-associating protein CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 Gene3D G3DSA:3.30.420.40 209 357 2.0E-39 T 28-03-2018 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 Hamap MF_00679 Chaperone protein HscA [hscA]. 1 616 45.376 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 SUPERFAMILY SSF100920 384 535 7.46E-50 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 Gene3D G3DSA:1.20.1270.10 529 615 7.6E-12 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 ProSitePatterns PS01036 Heat shock hsp70 proteins family signature 3. 332 346 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 SUPERFAMILY SSF100934 504 615 3.14E-36 T 28-03-2018 IPR029048 Heat shock protein 70kD, C-terminal domain CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 TIGRFAM TIGR01991 HscA: Fe-S protein assembly chaperone HscA 21 615 1.9E-270 T 28-03-2018 IPR010236 ISC system FeS cluster assembly, HscA chaperone GO:0005524|GO:0006457|GO:0016226|GO:0016887|GO:0051082 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 Gene3D G3DSA:3.30.420.40 20 208 1.1E-56 T 28-03-2018 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 ProSitePatterns PS00329 Heat shock hsp70 proteins family signature 2. 205 218 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 ProSitePatterns PS00297 Heat shock hsp70 proteins family signature 1. 24 31 - T 28-03-2018 IPR018181 Heat shock protein 70, conserved site Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 SUPERFAMILY SSF53067 200 377 2.98E-52 T 28-03-2018 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 Pfam PF00012 Hsp70 protein 21 600 1.5E-202 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 Gene3D G3DSA:2.60.34.10 387 528 5.9E-49 T 28-03-2018 IPR029047 Heat shock protein 70kD, peptide-binding domain Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 SUPERFAMILY SSF53067 19 196 1.02E-49 T 28-03-2018 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 329 345 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 385 404 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 20 33 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 48 60 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 360 380 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 466 482 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 152 172 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS18600 a6d238fe0a3c4f12d0b06c4a7e2b3a5c 616 PRINTS PR00301 70kDa heat shock protein signature 211 221 1.4E-54 T 28-03-2018 IPR013126 Heat shock protein 70 family Reactome: R-HSA-3371453 CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 Gene3D G3DSA:1.10.150.310 83 126 5.0E-14 T 28-03-2018 CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 TIGRFAM TIGR00426 TIGR00426: competence protein ComEA helix-hairpin-helix repeat region 58 126 3.8E-37 T 28-03-2018 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 SMART SM00278 74 93 80.0 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 SMART SM00278 104 123 8.6 T 28-03-2018 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 GO:0003677|GO:0006281 CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 Pfam PF12836 Helix-hairpin-helix motif 63 123 4.4E-20 T 28-03-2018 CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 Gene3D G3DSA:1.10.150.20 26 82 2.1E-8 T 28-03-2018 CI104_RS06445 b650b847aec3b89a63a68125f67b42aa 126 SUPERFAMILY SSF47781 47 122 8.0E-25 T 28-03-2018 IPR010994 RuvA domain 2-like CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 106 126 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 SUPERFAMILY SSF52096 3 303 4.57E-67 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 SUPERFAMILY SSF48179 495 637 2.13E-29 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Hamap MF_01621 Fatty acid oxidation complex subunit alpha [fadB]. 1 715 53.54 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 SUPERFAMILY SSF48179 622 714 6.8E-23 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Gene3D G3DSA:1.10.1040.10 503 592 8.3E-22 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Pfam PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain 316 494 7.9E-60 T 28-03-2018 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Gene3D G3DSA:3.90.226.10 13 265 8.2E-53 T 28-03-2018 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Pfam PF00378 Enoyl-CoA hydratase/isomerase 14 205 2.9E-37 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 TIGRFAM TIGR02437 FadB: fatty oxidation complex, alpha subunit FadB 1 714 0.0 T 28-03-2018 IPR012799 Fatty oxidation complex, alpha subunit FadB GO:0003857|GO:0004165|GO:0004300|GO:0008692|GO:0009062|GO:0036125|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5137|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6837|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-7291|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 496 592 3.0E-25 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Pfam PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain 627 691 3.8E-6 T 28-03-2018 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Gene3D G3DSA:3.40.50.720 266 495 1.7E-60 T 28-03-2018 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 Gene3D G3DSA:1.10.1040.10 622 713 5.3E-16 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 ProSitePatterns PS00067 3-hydroxyacyl-CoA dehydrogenase signature. 493 517 - T 28-03-2018 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site GO:0003857|GO:0006631|GO:0016491|GO:0055114 KEGG: 00062+4.2.1.17+1.1.1.35|KEGG: 00071+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00120+1.1.1.35|KEGG: 00280+4.2.1.17+1.1.1.35|KEGG: 00281+4.2.1.17+1.1.1.35|KEGG: 00310+4.2.1.17+1.1.1.35|KEGG: 00360+4.2.1.17|KEGG: 00362+4.2.1.17+1.1.1.35|KEGG: 00380+4.2.1.17+1.1.1.35|KEGG: 00410+4.2.1.17|KEGG: 00592+4.2.1.17|KEGG: 00623+1.1.1.35|KEGG: 00627+4.2.1.17|KEGG: 00640+4.2.1.17|KEGG: 00650+5.1.2.3+4.2.1.17+1.1.1.35|KEGG: 00720+4.2.1.17+1.1.1.35|KEGG: 00903+4.2.1.17|KEGG: 00930+4.2.1.17+1.1.1.35|MetaCyc: PWY-1361|MetaCyc: PWY-5109|MetaCyc: PWY-5136|MetaCyc: PWY-5138|MetaCyc: PWY-5177|MetaCyc: PWY-5789|MetaCyc: PWY-6435|MetaCyc: PWY-6583|MetaCyc: PWY-6863|MetaCyc: PWY-6883|MetaCyc: PWY-6944|MetaCyc: PWY-6945|MetaCyc: PWY-6946|MetaCyc: PWY-7007|MetaCyc: PWY-7046|MetaCyc: PWY-7094|MetaCyc: PWY-7216|MetaCyc: PWY-735|MetaCyc: PWY-7401|MetaCyc: PWY-7606|MetaCyc: PWY-7654|MetaCyc: PWY-7656|MetaCyc: PWY-7726|MetaCyc: PWY-7778|MetaCyc: PWY-7779|MetaCyc: PWY-81 CI104_RS24650 2682a336b7125a2071b6e37b5f81b6eb 729 SUPERFAMILY SSF51735 314 495 2.6E-57 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS20770 856d72bcf713a6a38ed0726292d74ee8 139 Pfam PF05025 RbsD / FucU transport protein family 1 133 1.1E-27 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS20770 856d72bcf713a6a38ed0726292d74ee8 139 Gene3D G3DSA:3.40.1650.10 1 136 1.9E-25 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS20770 856d72bcf713a6a38ed0726292d74ee8 139 SUPERFAMILY SSF102546 1 133 1.44E-24 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 Gene3D G3DSA:3.40.190.10 93 176 6.4E-19 T 28-03-2018 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 Pfam PF03466 LysR substrate binding domain 89 283 2.0E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.4E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 54 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 22 33 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 33 43 2.7E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 SUPERFAMILY SSF46785 2 86 2.53E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 SUPERFAMILY SSF53850 90 285 3.98E-38 T 28-03-2018 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 Gene3D G3DSA:3.40.190.10 177 256 7.1E-15 T 28-03-2018 CI104_RS14700 dc323f923edca16fea10a98540ff72d0 286 Gene3D G3DSA:1.10.10.10 1 87 3.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15215 094d0ba7a139130e86f313820602ce3a 229 Pfam PF04352 ProQ/FINO family 8 115 7.7E-43 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS15215 094d0ba7a139130e86f313820602ce3a 229 Gene3D G3DSA:1.10.1710.10 1 121 2.3E-41 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS15215 094d0ba7a139130e86f313820602ce3a 229 Hamap MF_00749 RNA chaperone ProQ [proQ]. 3 228 30.565 T 28-03-2018 IPR023529 RNA chaperone ProQ GO:0003723|GO:0010608|GO:0033592|GO:0034057 CI104_RS15215 094d0ba7a139130e86f313820602ce3a 229 SUPERFAMILY SSF48657 5 119 1.96E-40 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS15215 094d0ba7a139130e86f313820602ce3a 229 SMART SM00945 5 119 1.9E-60 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS15215 094d0ba7a139130e86f313820602ce3a 229 Pfam PF17516 ProQ C-terminal domain 179 229 2.5E-24 T 28-03-2018 IPR035236 RNA chaperone ProQ, C-terminal CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 285 7.0E-37 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 SUPERFAMILY SSF48179 165 293 1.7E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 Gene3D G3DSA:3.40.50.720 1 163 2.1E-31 T 28-03-2018 CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 Gene3D G3DSA:1.10.1040.10 164 294 2.1E-32 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 SUPERFAMILY SSF51735 5 164 5.03E-46 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 5 163 3.3E-50 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS21500 fd521d53c5a71ed1cda5d7e0deeeab60 298 PIRSF PIRSF000103 1 295 2.5E-84 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 SUPERFAMILY SSF54826 1 120 1.93E-22 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 Gene3D G3DSA:3.30.390.10 1 125 1.1E-20 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 Pfam PF13378 Enolase C-terminal domain-like 145 347 4.1E-45 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 32 118 3.5E-8 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 SUPERFAMILY SSF51604 106 350 2.75E-50 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 Gene3D G3DSA:3.20.20.120 126 345 2.5E-44 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS09925 2afa57249a78791c19f070a31f53e10b 384 SMART SM00922 137 237 8.4E-16 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS10380 71bf82a933e634de9b43c9ea3db73b1b 402 Hamap MF_01529 Multidrug resistance protein MdtH [mdtH]. 1 401 41.639 T 28-03-2018 IPR022855 Multidrug resistance protein MdtH CI104_RS10380 71bf82a933e634de9b43c9ea3db73b1b 402 Gene3D G3DSA:1.20.1250.20 198 401 1.4E-19 T 28-03-2018 CI104_RS10380 71bf82a933e634de9b43c9ea3db73b1b 402 Gene3D G3DSA:1.20.1250.20 8 194 1.9E-26 T 28-03-2018 CI104_RS10380 71bf82a933e634de9b43c9ea3db73b1b 402 Pfam PF07690 Major Facilitator Superfamily 20 186 9.4E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS10380 71bf82a933e634de9b43c9ea3db73b1b 402 Pfam PF07690 Major Facilitator Superfamily 211 388 6.0E-12 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS10380 71bf82a933e634de9b43c9ea3db73b1b 402 SUPERFAMILY SSF103473 13 391 1.44E-51 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16340 115d5a4081836103ad363b4a5bd0f9dd 16 Pfam PF08047 Histidine operon leader peptide 1 16 4.6E-10 T 28-03-2018 IPR012565 Histidine operon leader peptide GO:0000105 CI104_RS21670 6f3e8c7a7062761f34ee164c55c94d5e 655 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 162 172 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS21670 6f3e8c7a7062761f34ee164c55c94d5e 655 SUPERFAMILY SSF143975 83 426 2.88E-90 T 28-03-2018 CI104_RS21670 6f3e8c7a7062761f34ee164c55c94d5e 655 TIGRFAM TIGR03432 yjhG_yagF: putative dehydratase, YjhG/YagF family 10 645 0.0 T 28-03-2018 IPR017798 Dehydratase YjhG/YagF CI104_RS21670 6f3e8c7a7062761f34ee164c55c94d5e 655 SUPERFAMILY SSF52016 440 639 1.8E-39 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS21670 6f3e8c7a7062761f34ee164c55c94d5e 655 Pfam PF00920 Dehydratase family 87 581 2.3E-114 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS21670 6f3e8c7a7062761f34ee164c55c94d5e 655 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 529 540 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS16255 b8b5aa9421fea8c7e26cd17bd95be5d4 370 Pfam PF00465 Iron-containing alcohol dehydrogenase 8 359 1.6E-106 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS16255 b8b5aa9421fea8c7e26cd17bd95be5d4 370 Gene3D G3DSA:3.40.50.1970 1 163 1.0E-36 T 28-03-2018 CI104_RS16255 b8b5aa9421fea8c7e26cd17bd95be5d4 370 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 154 182 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS16255 b8b5aa9421fea8c7e26cd17bd95be5d4 370 Gene3D G3DSA:1.20.1090.10 165 370 6.3E-56 T 28-03-2018 CI104_RS16255 b8b5aa9421fea8c7e26cd17bd95be5d4 370 SUPERFAMILY SSF56796 3 368 1.03E-104 T 28-03-2018 CI104_RS28245 072642b097e9f66ff0e6c2782950863e 277 Pfam PF02384 N-6 DNA Methylase 139 237 9.9E-10 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CI104_RS28245 072642b097e9f66ff0e6c2782950863e 277 SUPERFAMILY SSF53335 121 238 5.64E-17 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS28245 072642b097e9f66ff0e6c2782950863e 277 Gene3D G3DSA:3.40.50.150 139 263 1.3E-10 T 28-03-2018 CI104_RS28245 072642b097e9f66ff0e6c2782950863e 277 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 140 156 1.8E-5 T 28-03-2018 CI104_RS28245 072642b097e9f66ff0e6c2782950863e 277 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 172 186 1.8E-5 T 28-03-2018 CI104_RS15205 14bd7366f247c34d5528899e00ddf662 293 Pfam PF01435 Peptidase family M48 73 288 8.0E-40 T 28-03-2018 IPR001915 Peptidase M48 GO:0004222|GO:0006508 CI104_RS15205 14bd7366f247c34d5528899e00ddf662 293 Gene3D G3DSA:3.30.2010.10 64 157 5.8E-21 T 28-03-2018 CI104_RS15205 14bd7366f247c34d5528899e00ddf662 293 Hamap MF_00188 Protease HtpX [htpX]. 1 289 27.225 T 28-03-2018 IPR022919 Peptidase M48, protease HtpX, putative GO:0004222 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 Pfam PF02120 Flagellar hook-length control protein FliK 276 355 7.7E-21 T 28-03-2018 IPR021136 Flagellar hook-length control protein-like, C-terminal CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 65 81 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 264 286 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 2 15 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 126 149 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 241 263 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 386 402 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 307 322 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 21 38 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 289 307 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS15870 f5e9f7f4dbbf43d990b4b428632cec9d 403 PRINTS PR01007 Flagellar hook-length control protein signature 322 345 9.6E-97 T 28-03-2018 IPR001635 Flagellar hook-length control protein FliK GO:0009424|GO:0044780 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 75 95 1.4E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 27 47 1.4E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 182 204 1.4E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 370 389 1.4E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 397 417 1.4E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 PRINTS PR00173 Glutamate-aspartate symporter signature 105 130 1.4E-27 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 Pfam PF00375 Sodium:dicarboxylate symporter family 29 443 1.9E-104 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 SUPERFAMILY SSF118215 29 443 1.57E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS11875 683a6988f8d1bd8484ce97e221c17f2b 463 Gene3D G3DSA:1.10.3860.10 19 450 3.7E-98 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS04955 d56e2b33e379f076fdc29304748005df 247 Hamap MF_01092 Cell division protein ZapD [zapD]. 4 247 33.046 T 28-03-2018 IPR009777 Cell division protein ZapD CI104_RS04955 d56e2b33e379f076fdc29304748005df 247 Gene3D G3DSA:2.60.440.10 175 247 4.8E-27 T 28-03-2018 IPR027462 Z ring-associated protein D, C-terminal domain CI104_RS04955 d56e2b33e379f076fdc29304748005df 247 SUPERFAMILY SSF160950 3 247 2.88E-92 T 28-03-2018 IPR009777 Cell division protein ZapD CI104_RS04955 d56e2b33e379f076fdc29304748005df 247 Pfam PF07072 Cell division protein 19 225 6.6E-78 T 28-03-2018 IPR009777 Cell division protein ZapD CI104_RS04955 d56e2b33e379f076fdc29304748005df 247 Gene3D G3DSA:1.10.3900.10 13 174 1.0E-62 T 28-03-2018 CI104_RS25725 8a48f415587c5de82f9d9f26c902ad94 166 Gene3D G3DSA:1.10.150.20 6 50 1.1E-7 T 28-03-2018 CI104_RS25725 8a48f415587c5de82f9d9f26c902ad94 166 Gene3D G3DSA:3.40.50.10190 51 154 5.1E-10 T 28-03-2018 IPR001357 BRCT domain CI104_RS25725 8a48f415587c5de82f9d9f26c902ad94 166 Pfam PF00533 BRCA1 C Terminus (BRCT) domain 80 136 1.6E-6 T 28-03-2018 IPR001357 BRCT domain CI104_RS25725 8a48f415587c5de82f9d9f26c902ad94 166 SUPERFAMILY SSF52113 78 136 3.2E-9 T 28-03-2018 IPR001357 BRCT domain CI104_RS24275 31c3d79864ae1de4043aa6b3fd48c604 419 SUPERFAMILY SSF51658 4 418 4.78E-85 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS24275 31c3d79864ae1de4043aa6b3fd48c604 419 Hamap MF_00541 L-rhamnose isomerase [rhaA]. 1 419 277.744 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CI104_RS24275 31c3d79864ae1de4043aa6b3fd48c604 419 ProDom PD042532 ISOMERASE L-RHAMNOSE METAL-BINDING METABOLISM RHAMNOSE MANGANESE ENZYME KINASE 3D-STRUCTURE RHAA/RHAB 9 418 0.0 T 28-03-2018 CI104_RS24275 31c3d79864ae1de4043aa6b3fd48c604 419 Pfam PF06134 L-rhamnose isomerase (RhaA) 3 418 1.9E-237 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CI104_RS24275 31c3d79864ae1de4043aa6b3fd48c604 419 TIGRFAM TIGR01748 rhaA: L-rhamnose isomerase 5 418 2.1E-246 T 28-03-2018 IPR009308 Rhamnose isomerase GO:0008740|GO:0019299|GO:0030145 KEGG: 00051+5.3.1.14 CI104_RS24275 31c3d79864ae1de4043aa6b3fd48c604 419 Gene3D G3DSA:3.20.20.150 1 419 6.6E-112 T 28-03-2018 CI104_RS26855 2fc95a6126479b0ca33f174e98a0130e 210 Gene3D G3DSA:2.160.10.10 1 209 6.0E-46 T 28-03-2018 CI104_RS26855 2fc95a6126479b0ca33f174e98a0130e 210 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 119 147 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS26855 2fc95a6126479b0ca33f174e98a0130e 210 SUPERFAMILY SSF51161 18 206 8.04E-47 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS26855 2fc95a6126479b0ca33f174e98a0130e 210 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 110 144 1.7E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS09225 3aa656a4dfdc76188f86c611d0c6b20a 187 Gene3D G3DSA:3.40.50.10610 12 187 1.8E-43 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CI104_RS09225 3aa656a4dfdc76188f86c611d0c6b20a 187 Pfam PF03886 ABC-type transport auxiliary lipoprotein component 26 180 7.8E-41 T 28-03-2018 IPR005586 ABC-type transport auxiliary lipoprotein component CI104_RS09225 3aa656a4dfdc76188f86c611d0c6b20a 187 SUPERFAMILY SSF159594 24 183 1.41E-29 T 28-03-2018 CI104_RS06830 7b37f1eebceaff32f123a20ff3e643e7 240 Gene3D G3DSA:3.40.50.150 1 198 1.1E-21 T 28-03-2018 CI104_RS06830 7b37f1eebceaff32f123a20ff3e643e7 240 SUPERFAMILY SSF53335 1 190 3.88E-18 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS06830 7b37f1eebceaff32f123a20ff3e643e7 240 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 108 114 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS00630 d9c1341b8e2798e703fead20a2a4c6d1 319 Gene3D G3DSA:3.20.20.370 17 241 1.8E-80 T 28-03-2018 CI104_RS00630 d9c1341b8e2798e703fead20a2a4c6d1 319 Pfam PF04748 Divergent polysaccharide deacetylase 28 237 3.6E-75 T 28-03-2018 IPR006837 Divergent polysaccharide deacetylase CI104_RS00630 d9c1341b8e2798e703fead20a2a4c6d1 319 SUPERFAMILY SSF88713 24 238 1.11E-72 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CI104_RS15690 cac049acdef8ab40be510140e7cbbfd4 377 SUPERFAMILY SSF55469 40 105 6.49E-12 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS15690 cac049acdef8ab40be510140e7cbbfd4 377 SUPERFAMILY SSF55469 272 342 6.49E-12 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS15690 cac049acdef8ab40be510140e7cbbfd4 377 Gene3D G3DSA:3.40.109.30 29 113 5.6E-8 T 28-03-2018 CI104_RS15690 cac049acdef8ab40be510140e7cbbfd4 377 Gene3D G3DSA:3.40.109.10 124 372 3.8E-16 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS00675 81224007e17560a8dc242dd252923905 158 TIGRFAM TIGR00185 tRNA_yibK_trmL: tRNA (cytidine(34)-2'-O)-methyltransferase 1 153 4.8E-74 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS00675 81224007e17560a8dc242dd252923905 158 PIRSF PIRSF029256 1 154 1.4E-71 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS00675 81224007e17560a8dc242dd252923905 158 SUPERFAMILY SSF75217 1 152 1.5E-45 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS00675 81224007e17560a8dc242dd252923905 158 Pfam PF00588 SpoU rRNA Methylase family 2 142 1.1E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CI104_RS00675 81224007e17560a8dc242dd252923905 158 Hamap MF_01885 tRNA (cytidine(34)-2'-O)-methyltransferase [trmL]. 2 151 34.525 T 28-03-2018 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase GO:0001510|GO:0008168 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS00675 81224007e17560a8dc242dd252923905 158 Gene3D G3DSA:3.40.1280.10 1 157 2.8E-37 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 Pfam PF00027 Cyclic nucleotide-binding domain 48 128 9.9E-16 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 Pfam PF13545 Crp-like helix-turn-helix domain 163 229 2.0E-8 T 28-03-2018 IPR012318 Crp-type HTH domain GO:0003677|GO:0006355 CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 Gene3D G3DSA:2.60.120.10 2 145 6.6E-22 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 SMART SM00100 25 143 2.4E-10 T 28-03-2018 IPR000595 Cyclic nucleotide-binding domain CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 Gene3D G3DSA:1.10.10.10 146 233 1.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 SUPERFAMILY SSF51206 42 152 1.3E-23 T 28-03-2018 IPR018490 Cyclic nucleotide-binding-like CI104_RS24970 ed602c1e88d94de59ad267275b999267 233 SUPERFAMILY SSF46785 161 231 4.35E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 Gene3D G3DSA:3.30.110.10 87 180 9.9E-36 T 28-03-2018 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 Pfam PF05198 Translation initiation factor IF-3, N-terminal domain 15 84 1.7E-30 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 Pfam PF00707 Translation initiation factor IF-3, C-terminal domain 91 177 5.7E-38 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 SUPERFAMILY SSF54364 13 86 1.05E-28 T 28-03-2018 IPR019814 Translation initiation factor 3, N-terminal GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 Gene3D G3DSA:3.10.20.80 10 86 6.9E-32 T 28-03-2018 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 SUPERFAMILY SSF55200 90 179 2.75E-35 T 28-03-2018 IPR019815 Translation initiation factor 3, C-terminal GO:0006413 Reactome: R-HSA-5368286 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 TIGRFAM TIGR00168 infC: translation initiation factor IF-3 15 179 6.8E-78 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 Hamap MF_00080 Translation initiation factor IF-3 [infC]. 9 179 30.759 T 28-03-2018 IPR001288 Translation initiation factor 3 GO:0003743|GO:0006413 Reactome: R-HSA-5368286 CI104_RS11940 0d3bce4dd149a8ccd69d0dde2dff158a 180 ProSitePatterns PS00938 Initiation factor 3 signature. 66 79 - T 28-03-2018 IPR019813 Translation initiation factor 3, conserved site GO:0003743|GO:0006413 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 SUPERFAMILY SSF81273 91 133 8.63E-12 T 28-03-2018 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 SMART SM00528 86 133 1.3E-25 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 SUPERFAMILY SSF81273 4 58 1.22E-16 T 28-03-2018 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 Gene3D G3DSA:4.10.430.10 92 133 7.9E-20 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 Pfam PF00816 H-NS histone family 36 127 1.8E-21 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 PIRSF PIRSF002096 1 133 4.8E-53 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CI104_RS19535 a933997ba1779e267ae64303967743aa 133 Gene3D G3DSA:1.10.287.1050 1 57 6.2E-20 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CI104_RS23040 d16e56518f96a65adcced82b0383c90d 332 TIGRFAM TIGR00793 kdgT: 2-keto-3-deoxygluconate transporter 1 312 3.4E-161 T 28-03-2018 IPR018395 2-keto-3-deoxygluconate permease, subgroup GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS23040 d16e56518f96a65adcced82b0383c90d 332 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 23 312 4.0E-84 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS23040 d16e56518f96a65adcced82b0383c90d 332 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 318 36.455 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS23040 d16e56518f96a65adcced82b0383c90d 332 Pfam PF03812 2-keto-3-deoxygluconate permease 3 312 2.7E-115 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS07310 6de0512a18266941c31d480667cd38c3 330 Gene3D G3DSA:1.10.3470.10 3 330 2.2E-62 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS07310 6de0512a18266941c31d480667cd38c3 330 Pfam PF01032 FecCD transport family 20 324 1.5E-83 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS07310 6de0512a18266941c31d480667cd38c3 330 SUPERFAMILY SSF81345 3 325 6.02E-72 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 Pfam PF02108 Flagellar assembly protein FliH 102 225 2.8E-41 T 28-03-2018 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 207 232 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 190 206 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 59 81 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 139 161 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 82 100 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 162 189 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 5 24 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 101 120 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS15855 bc11d3b6f29a674ef513df0ceb4022a0 234 PRINTS PR01003 Flagellar assembly protein FliH signature 121 138 4.1E-117 T 28-03-2018 IPR000563 Flagellar assembly protein FliH GO:0003774|GO:0009288|GO:0071973 CI104_RS01295 e9539cba26bd3b474c17fa60fed65d07 140 PIRSF PIRSF003230 3 136 5.3E-21 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CI104_RS01295 e9539cba26bd3b474c17fa60fed65d07 140 Gene3D G3DSA:3.10.129.10 2 136 2.5E-28 T 28-03-2018 CI104_RS01295 e9539cba26bd3b474c17fa60fed65d07 140 SUPERFAMILY SSF54637 7 136 4.36E-35 T 28-03-2018 IPR029069 HotDog domain CI104_RS01295 e9539cba26bd3b474c17fa60fed65d07 140 Pfam PF13279 Thioesterase-like superfamily 17 122 1.0E-13 T 28-03-2018 CI104_RS23185 cbdaae6546b39a9b84a3b2c3835409e1 187 Gene3D G3DSA:3.90.10.10 22 106 2.1E-9 T 28-03-2018 CI104_RS23185 cbdaae6546b39a9b84a3b2c3835409e1 187 SUPERFAMILY SSF48695 6 168 7.21E-31 T 28-03-2018 IPR011031 Multihaem cytochrome CI104_RS23185 cbdaae6546b39a9b84a3b2c3835409e1 187 Pfam PF13435 Cytochrome c554 and c-prime 36 82 0.0059 T 28-03-2018 IPR023155 Cytochrome c-552/4 CI104_RS23185 cbdaae6546b39a9b84a3b2c3835409e1 187 Pfam PF09699 Doubled CXXCH motif (Paired_CXXCH_1) 132 170 9.5E-5 T 28-03-2018 IPR010177 Doubled CXXCH motif CI104_RS23185 cbdaae6546b39a9b84a3b2c3835409e1 187 Gene3D G3DSA:1.10.3820.10 107 182 1.1E-9 T 28-03-2018 CI104_RS23185 cbdaae6546b39a9b84a3b2c3835409e1 187 TIGRFAM TIGR03146 cyt_nit_nrfB: cytochrome c nitrite reductase, pentaheme subunit 37 170 3.6E-58 T 28-03-2018 IPR017564 Cytochrome c nitrite reductase, pentahaem subunit GO:0006807|GO:0020037|GO:0042597 CI104_RS19695 a805d7e9eb275c108051757d001291b7 166 Pfam PF02631 RecX family 50 162 1.8E-28 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CI104_RS19695 a805d7e9eb275c108051757d001291b7 166 Gene3D G3DSA:1.10.10.10 12 69 3.5E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19695 a805d7e9eb275c108051757d001291b7 166 Hamap MF_01114 Regulatory protein RecX [recX]. 2 166 12.921 T 28-03-2018 IPR003783 Regulatory protein RecX GO:0006282 CI104_RS19695 a805d7e9eb275c108051757d001291b7 166 Gene3D G3DSA:1.10.10.10 70 114 3.4E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19695 a805d7e9eb275c108051757d001291b7 166 Gene3D G3DSA:1.10.10.10 116 166 3.4E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS23430 b91446c83db908e5de2154019948da45 514 SUPERFAMILY SSF160964 15 260 2.88E-89 T 28-03-2018 CI104_RS23430 b91446c83db908e5de2154019948da45 514 SUPERFAMILY SSF161098 261 503 2.49E-61 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS23430 b91446c83db908e5de2154019948da45 514 Gene3D G3DSA:3.10.650.10 197 269 1.0E-27 T 28-03-2018 CI104_RS23430 b91446c83db908e5de2154019948da45 514 Gene3D G3DSA:2.40.430.10 119 196 1.1E-29 T 28-03-2018 CI104_RS23430 b91446c83db908e5de2154019948da45 514 Gene3D G3DSA:1.10.3720.10 270 514 4.9E-43 T 28-03-2018 CI104_RS23430 b91446c83db908e5de2154019948da45 514 Gene3D G3DSA:1.20.58.370 4 95 4.9E-32 T 28-03-2018 IPR035277 Maltose transport system permease protein MalF N-terminal domain CI104_RS23430 b91446c83db908e5de2154019948da45 514 Pfam PF14785 Maltose transport system permease protein MalF P2 domain 100 260 1.2E-60 T 28-03-2018 IPR029345 Maltose transport system permease protein MalF, P2 domain CI104_RS23430 b91446c83db908e5de2154019948da45 514 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 297 501 4.5E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14485 d486979925134db9796bf0a8d2b405b9 271 SMART SM00382 41 226 5.1E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS14485 d486979925134db9796bf0a8d2b405b9 271 Pfam PF00005 ABC transporter 33 181 1.8E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS14485 d486979925134db9796bf0a8d2b405b9 271 SUPERFAMILY SSF52540 6 244 7.83E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14485 d486979925134db9796bf0a8d2b405b9 271 Gene3D G3DSA:3.40.50.300 14 246 3.9E-59 T 28-03-2018 CI104_RS16575 b8e40f66d98a114b3afb2e7ed36e7669 618 Pfam PF05170 AsmA family 3 190 1.5E-14 T 28-03-2018 IPR007844 AsmA CI104_RS16575 b8e40f66d98a114b3afb2e7ed36e7669 618 Pfam PF13502 AsmA-like C-terminal region 358 546 6.3E-20 T 28-03-2018 IPR032712 AsmA-like, C-terminal CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 TIGRFAM TIGR01318 gltD_gamma_fam: glutamate synthase, small subunit 189 653 8.8E-259 T 28-03-2018 IPR006006 Glutamate synthase, NADH/NADPH, small subunit 2 GO:0006537|GO:0016639 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.30.70.20 69 113 5.7E-15 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.50.50.60 423 494 4.1E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.50.50.60 495 582 1.2E-16 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 328 640 2.3E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 SUPERFAMILY SSF51971 327 582 1.47E-66 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 PRINTS PR00419 Adrenodoxin reductase family signature 471 485 8.4E-38 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 PRINTS PR00419 Adrenodoxin reductase family signature 352 365 8.4E-38 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 PRINTS PR00419 Adrenodoxin reductase family signature 505 518 8.4E-38 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 PRINTS PR00419 Adrenodoxin reductase family signature 394 404 8.4E-38 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 PRINTS PR00419 Adrenodoxin reductase family signature 329 351 8.4E-38 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:1.10.1060.10 191 324 2.3E-36 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 SUPERFAMILY SSF54862 196 294 1.88E-40 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 SUPERFAMILY SSF54862 1 161 1.88E-40 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.40.50.720 325 422 1.1E-17 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.50.50.60 584 658 5.7E-9 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.30.70.20 2 68 5.1E-9 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Pfam PF13247 4Fe-4S dicluster domain 55 144 2.7E-9 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Pfam PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster 205 313 2.4E-36 T 28-03-2018 IPR028261 Dihydroprymidine dehydrogenase domain II Reactome: R-HSA-73621 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 Gene3D G3DSA:3.30.70.20 114 190 9.7E-6 T 28-03-2018 CI104_RS18345 a56bc3c38a39a8a4f2d323bab3db313f 659 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 87 98 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS02250 e91332874d1a7893a52931b48c1b5b66 184 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 97 130 6.3E-7 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS02250 e91332874d1a7893a52931b48c1b5b66 184 Gene3D G3DSA:2.160.10.10 2 184 4.3E-39 T 28-03-2018 CI104_RS02250 e91332874d1a7893a52931b48c1b5b66 184 SUPERFAMILY SSF51161 5 176 6.38E-44 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 TIGRFAM TIGR01230 agmatinase: agmatinase 22 299 2.0E-116 T 28-03-2018 IPR005925 Agmatinase-related KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305|Reactome: R-HSA-351143 CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 ProSitePatterns PS01053 Arginase family signature. 228 249 - T 28-03-2018 IPR020855 Ureohydrolase, manganese-binding site GO:0016813|GO:0046872 CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 SUPERFAMILY SSF52768 13 301 1.39E-91 T 28-03-2018 CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 Gene3D G3DSA:3.40.800.10 5 306 3.7E-93 T 28-03-2018 CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 PIRSF PIRSF036979 13 304 3.2E-101 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 Hamap MF_01418 Agmatinase [speB]. 1 304 70.353 T 28-03-2018 IPR023694 Agmatinase GO:0008783|GO:0009446|GO:0030145 KEGG: 00330+3.5.3.11|MetaCyc: PWY-40|MetaCyc: PWY-6305 CI104_RS04265 7e6403ae80d84730c65dc379de757753 306 Pfam PF00491 Arginase family 34 297 6.5E-86 T 28-03-2018 IPR006035 Ureohydrolase GO:0046872 CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 SUPERFAMILY SSF51182 51 176 2.14E-24 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 Pfam PF07883 Cupin domain 105 171 2.8E-9 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 Pfam PF01381 Helix-turn-helix 12 64 3.1E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 Gene3D G3DSA:2.60.120.10 70 178 1.5E-11 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 SUPERFAMILY SSF47413 3 72 8.31E-18 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 Gene3D G3DSA:1.10.260.40 1 69 4.7E-15 T 28-03-2018 CI104_RS13450 26473738cbd0bec6f2c588ace76081df 178 SMART SM00530 11 66 7.3E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Gene3D G3DSA:3.40.50.300 237 425 2.2E-42 T 28-03-2018 CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Pfam PF00270 DEAD/DEAH box helicase 48 212 6.5E-51 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 SMART SM00487 42 240 3.7E-64 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Pfam PF00271 Helicase conserved C-terminal domain 249 357 8.2E-29 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Hamap MF_00964 ATP-dependent RNA helicase DeaD [deaD]. 18 577 47.3 T 28-03-2018 IPR028618 ATP-dependent RNA helicase DeaD GO:0000027|GO:0004004|GO:0070417 CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 SUPERFAMILY SSF52540 164 371 1.86E-50 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Gene3D G3DSA:3.40.50.300 18 236 1.2E-59 T 28-03-2018 CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 SMART SM00490 276 357 1.5E-31 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Pfam PF12343 Cold shock protein DEAD box A 584 640 3.0E-9 T 28-03-2018 IPR021046 Cold-shock protein, DEAD box A, C-terminal GO:0016817 CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 ProSitePatterns PS00039 DEAD-box subfamily ATP-dependent helicases signature. 171 179 - T 28-03-2018 IPR000629 ATP-dependent RNA helicase DEAD-box, conserved site CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 Pfam PF03880 DbpA RNA binding domain 506 575 2.5E-20 T 28-03-2018 IPR005580 DEAD box helicase DbpA/CsdA, RNA-binding domain CI104_RS02925 6dff7fc3cc65fa627e2d1e33338a9afd 642 SUPERFAMILY SSF52540 9 226 5.53E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 Pfam PF00549 CoA-ligase 151 271 2.2E-20 T 28-03-2018 IPR005811 ATP-citrate lyase/succinyl-CoA ligase GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 Hamap MF_01988 Succinate--CoA ligase [ADP-forming] subunit alpha [sucD]. 1 288 43.37 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 ProSitePatterns PS01216 ATP-citrate lyase / succinyl-CoA ligases family signature 1. 152 181 - T 28-03-2018 IPR033847 ATP-citrate lyase/succinyl-CoA ligase, conserved site CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 PIRSF PIRSF001553 1 289 5.9E-135 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 ProSitePatterns PS00399 ATP-citrate lyase / succinyl-CoA ligases family active site. 236 249 - T 28-03-2018 IPR017440 ATP-citrate lyase/succinyl-CoA ligase, active site CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 SMART SM00881 4 100 3.3E-37 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 Gene3D G3DSA:3.40.50.261 120 289 2.7E-56 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 PRINTS PR01798 Succinyl-CoA synthase signature 82 99 1.5E-39 T 28-03-2018 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 PRINTS PR01798 Succinyl-CoA synthase signature 208 221 1.5E-39 T 28-03-2018 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 PRINTS PR01798 Succinyl-CoA synthase signature 240 257 1.5E-39 T 28-03-2018 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 PRINTS PR01798 Succinyl-CoA synthase signature 177 195 1.5E-39 T 28-03-2018 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 TIGRFAM TIGR01019 sucCoAalpha: succinate-CoA ligase, alpha subunit 4 287 5.7E-146 T 28-03-2018 IPR005810 Succinyl-CoA ligase, alpha subunit GO:0003824|GO:0008152 KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384|Reactome: R-HSA-71403 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 SUPERFAMILY SSF52210 123 288 3.27E-57 T 28-03-2018 IPR016102 Succinyl-CoA synthetase-like KEGG: 00020+6.2.1.5|KEGG: 00640+6.2.1.5|KEGG: 00660+6.2.1.5|KEGG: 00720+6.2.1.5|MetaCyc: PWY-5392|MetaCyc: PWY-5537|MetaCyc: PWY-5538|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7384 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 SUPERFAMILY SSF51735 1 122 1.49E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 Gene3D G3DSA:3.40.50.720 1 119 1.7E-44 T 28-03-2018 CI104_RS07925 2f1731464e209c237d82f69f821ba132 289 Pfam PF02629 CoA binding domain 6 99 2.3E-31 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS01980 2ec1494ae28f176c6855b9a9ee43133b 240 Pfam PF13309 HTH domain 171 228 3.3E-19 T 28-03-2018 CI104_RS01980 2ec1494ae28f176c6855b9a9ee43133b 240 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 27 153 1.0E-68 T 28-03-2018 IPR013559 YheO-like CI104_RS01980 2ec1494ae28f176c6855b9a9ee43133b 240 Pfam PF08348 YheO-like PAS domain 29 137 3.6E-36 T 28-03-2018 IPR013559 YheO-like CI104_RS01980 2ec1494ae28f176c6855b9a9ee43133b 240 Gene3D G3DSA:1.10.10.60 185 240 3.4E-6 T 28-03-2018 CI104_RS05260 69d69cff8357877d9ad8f5394d8f4eeb 385 Gene3D G3DSA:3.30.450.40 27 165 0.0016 T 28-03-2018 IPR029016 GAF domain-like CI104_RS05260 69d69cff8357877d9ad8f5394d8f4eeb 385 Pfam PF05651 Putative sugar diacid recognition 6 138 5.3E-49 T 28-03-2018 IPR008599 Putative sugar diacid recognition CI104_RS05260 69d69cff8357877d9ad8f5394d8f4eeb 385 Gene3D G3DSA:1.10.10.60 308 359 2.1E-5 T 28-03-2018 CI104_RS05260 69d69cff8357877d9ad8f5394d8f4eeb 385 Pfam PF13556 PucR C-terminal helix-turn-helix domain 323 380 3.4E-22 T 28-03-2018 IPR025736 PucR C-terminal helix-turn-helix domain CI104_RS09295 2d9a996701951a097446a58f7dedce82 105 Hamap MF_01194 Heat shock protein HspQ [hspQ]. 1 105 37.786 T 28-03-2018 IPR022866 Heat shock protein HspQ CI104_RS09295 2d9a996701951a097446a58f7dedce82 105 Pfam PF08755 Hemimethylated DNA-binding protein YccV like 5 96 1.6E-19 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CI104_RS09295 2d9a996701951a097446a58f7dedce82 105 SMART SM00992 3 102 1.8E-35 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CI104_RS09295 2d9a996701951a097446a58f7dedce82 105 SUPERFAMILY SSF141255 4 95 1.11E-29 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CI104_RS09295 2d9a996701951a097446a58f7dedce82 105 Gene3D G3DSA:2.30.30.390 1 105 1.4E-18 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CI104_RS09295 2d9a996701951a097446a58f7dedce82 105 TIGRFAM TIGR02097 yccV: hemimethylated DNA binding domain 4 102 1.9E-35 T 28-03-2018 IPR011722 Hemimethylated DNA-binding domain GO:0003677 CI104_RS24145 970f7465b78111d005212488d99bb8f0 336 SUPERFAMILY SSF56655 2 325 6.71E-113 T 28-03-2018 CI104_RS24145 970f7465b78111d005212488d99bb8f0 336 Pfam PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded 3 322 2.7E-133 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CI104_RS24145 970f7465b78111d005212488d99bb8f0 336 PIRSF PIRSF004532 1 333 3.9E-143 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CI104_RS24145 970f7465b78111d005212488d99bb8f0 336 Gene3D G3DSA:3.30.540.10 1 149 1.0E-59 T 28-03-2018 CI104_RS24145 970f7465b78111d005212488d99bb8f0 336 Gene3D G3DSA:3.30.540.10 152 336 3.0E-55 T 28-03-2018 CI104_RS24145 970f7465b78111d005212488d99bb8f0 336 TIGRFAM TIGR00330 glpX: fructose-1,6-bisphosphatase, class II 1 334 9.6E-184 T 28-03-2018 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase GO:0006071|GO:0006094|GO:0042132 KEGG: 00010+3.1.3.11|KEGG: 00030+3.1.3.11|KEGG: 00051+3.1.3.11|KEGG: 00680+3.1.3.11|KEGG: 00710+3.1.3.11|MetaCyc: PWY-5484 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 ProSitePatterns PS00146 Beta-lactamase class-A active site. 72 87 - T 28-03-2018 IPR023650 Beta-lactamase, class-A active site KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 Pfam PF13354 Beta-lactamase enzyme family 60 266 3.8E-39 T 28-03-2018 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 SUPERFAMILY SSF56601 35 292 4.88E-78 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 Gene3D G3DSA:3.40.710.10 33 293 1.2E-34 T 28-03-2018 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 210 225 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 112 137 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 148 172 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 174 199 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 39 63 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 70 87 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14705 2286af70efc0d1896f4768418b43c274 294 PRINTS PR00118 Beta-lactamase class A signature 227 242 1.7E-68 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 Gene3D G3DSA:3.30.160.20 209 291 2.0E-32 T 28-03-2018 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 Pfam PF03462 PCRF domain 13 203 2.7E-75 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 228 244 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 SUPERFAMILY SSF75620 12 353 2.49E-137 T 28-03-2018 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 TIGRFAM TIGR00019 prfA: peptide chain release factor 1 1 358 2.5E-176 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 SMART SM00937 63 178 4.2E-71 T 28-03-2018 IPR005139 Peptide chain release factor GO:0006415 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 Pfam PF00472 RF-1 domain 216 321 2.1E-40 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 Hamap MF_00093 Peptide chain release factor 1 [prfA]. 5 357 41.101 T 28-03-2018 IPR004373 Peptide chain release factor 1 GO:0005737|GO:0006415|GO:0016149 CI104_RS14435 adac66539fd6f7d83c823d24d202bc84 360 Gene3D G3DSA:1.20.58.410 3 100 5.3E-20 T 28-03-2018 CI104_RS03795 2ef749a023b65b58d721b84c1985b157 217 Hamap MF_00180 3,4-dihydroxy-2-butanone 4-phosphate synthase [ribB]. 11 213 42.767 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS03795 2ef749a023b65b58d721b84c1985b157 217 Gene3D G3DSA:3.90.870.10 3 217 1.0E-91 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS03795 2ef749a023b65b58d721b84c1985b157 217 TIGRFAM TIGR00506 ribB: 3,4-dihydroxy-2-butanone-4-phosphate synthase 13 208 6.3E-84 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS03795 2ef749a023b65b58d721b84c1985b157 217 Pfam PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase 17 208 5.3E-82 T 28-03-2018 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB GO:0008686|GO:0009231 KEGG: 00740+4.1.99.12|MetaCyc: PWY-6167|MetaCyc: PWY-6168 CI104_RS03795 2ef749a023b65b58d721b84c1985b157 217 SUPERFAMILY SSF55821 7 212 9.84E-85 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS25890 b76d651986afc782b5faacbfa51080a5 190 Gene3D G3DSA:1.20.950.20 9 184 1.0E-8 T 28-03-2018 CI104_RS25890 b76d651986afc782b5faacbfa51080a5 190 Pfam PF01292 Prokaryotic cytochrome b561 13 179 3.8E-11 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CI104_RS25890 b76d651986afc782b5faacbfa51080a5 190 SUPERFAMILY SSF81342 13 175 6.43E-5 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 Gene3D G3DSA:3.40.50.1400 173 300 8.1E-40 T 28-03-2018 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 ProSitePatterns PS00534 Ferrochelatase signature. 189 207 - T 28-03-2018 IPR019772 Ferrochelatase, active site GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 Gene3D G3DSA:3.40.50.1400 1 172 3.0E-46 T 28-03-2018 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 SUPERFAMILY SSF53800 4 317 7.46E-101 T 28-03-2018 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 Hamap MF_00323 Ferrochelatase [hemH]. 4 320 37.887 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 TIGRFAM TIGR00109 hemH: ferrochelatase 1 318 2.2E-124 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CI104_RS06655 4ed30b8b4bba898f5f3a57f7182acfda 320 Pfam PF00762 Ferrochelatase 5 316 2.6E-108 T 28-03-2018 IPR001015 Ferrochelatase GO:0004325|GO:0006783 KEGG: 00860+4.99.1.1|Reactome: R-HSA-189451 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 23 142 1.2E-40 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 SUPERFAMILY SSF49354 23 141 5.23E-41 T 28-03-2018 IPR008962 PapD-like CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 SUPERFAMILY SSF49584 142 222 7.06E-16 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 163 220 6.7E-9 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 96 113 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 PRINTS PR00969 Pili chaperone signature 123 138 4.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 PRINTS PR00969 Pili chaperone signature 69 90 4.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 PRINTS PR00969 Pili chaperone signature 24 33 4.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 PRINTS PR00969 Pili chaperone signature 158 173 4.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 PRINTS PR00969 Pili chaperone signature 97 114 4.8E-29 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 Gene3D G3DSA:2.60.40.10 24 139 5.9E-36 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS15460 6e8024cc7072e07128d4a9d5598c59e1 230 Gene3D G3DSA:2.60.40.10 143 228 8.1E-17 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 SUPERFAMILY SSF141868 436 683 2.88E-86 T 28-03-2018 IPR001633 EAL domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 257 416 1.0E-35 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 SMART SM00052 430 676 1.1E-104 T 28-03-2018 IPR001633 EAL domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Pfam PF00563 EAL domain 436 671 3.8E-71 T 28-03-2018 IPR001633 EAL domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Gene3D G3DSA:3.30.70.270 253 423 4.5E-53 T 28-03-2018 CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Gene3D G3DSA:3.20.20.450 424 690 9.6E-92 T 28-03-2018 IPR001633 EAL domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 SMART SM00267 249 420 4.2E-54 T 28-03-2018 IPR000160 GGDEF domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 SUPERFAMILY SSF55073 265 422 8.63E-46 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Pfam PF03707 Bacterial signalling protein N terminal repeat 118 171 3.0E-12 T 28-03-2018 IPR005330 MHYT domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Pfam PF03707 Bacterial signalling protein N terminal repeat 184 241 1.9E-7 T 28-03-2018 IPR005330 MHYT domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Pfam PF03707 Bacterial signalling protein N terminal repeat 52 108 1.1E-14 T 28-03-2018 IPR005330 MHYT domain CI104_RS13770 58829e27811107d8fa2ee4259ccbc51b 704 Pfam PF00990 Diguanylate cyclase, GGDEF domain 260 415 7.3E-43 T 28-03-2018 IPR000160 GGDEF domain CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 393 403 1.5E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 PRINTS PR00344 Bacterial sensor protein C-terminal signature 410 428 1.5E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 SMART SM00304 175 228 9.8E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 338 444 2.6E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 TIGRFAM TIGR01386 cztS_silS_copS: heavy metal sensor kinase 2 445 3.0E-174 T 28-03-2018 IPR006290 Heavy metal sensor kinase GO:0000160|GO:0004673|GO:0016020 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 Pfam PF00512 His Kinase A (phospho-acceptor) domain 230 295 4.7E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 Gene3D G3DSA:1.10.287.130 219 289 3.8E-9 T 28-03-2018 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 Gene3D G3DSA:3.30.565.10 290 447 8.5E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 SUPERFAMILY SSF55874 284 441 4.71E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 SMART SM00387 338 447 4.1E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 SUPERFAMILY SSF47384 213 295 5.1E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS26305 9ad4e5725cdd5cfb7c06d0de1bbed55b 448 SMART SM00388 229 295 8.9E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS27340 8b660c2fa07cd3654f441956098dd65e 54 Gene3D G3DSA:1.10.10.60 7 54 2.2E-10 T 28-03-2018 CI104_RS27340 8b660c2fa07cd3654f441956098dd65e 54 Pfam PF02796 Helix-turn-helix domain of resolvase 9 52 1.9E-15 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27340 8b660c2fa07cd3654f441956098dd65e 54 SUPERFAMILY SSF46689 9 51 4.3E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS18775 4d1cc5f6c1b07292de094ae141f3fd64 454 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 20 37 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS18775 4d1cc5f6c1b07292de094ae141f3fd64 454 SUPERFAMILY SSF55604 7 81 1.26E-15 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS18775 4d1cc5f6c1b07292de094ae141f3fd64 454 Pfam PF00367 phosphotransferase system, EIIB 11 39 4.8E-10 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS18775 4d1cc5f6c1b07292de094ae141f3fd64 454 Pfam PF02378 Phosphotransferase system, EIIC 118 392 8.3E-33 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS18775 4d1cc5f6c1b07292de094ae141f3fd64 454 Gene3D G3DSA:3.30.1360.60 5 82 4.4E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 Pfam PF12833 Helix-turn-helix domain 179 256 3.8E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 SUPERFAMILY SSF46689 211 256 3.58E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 Gene3D G3DSA:1.10.10.60 165 212 8.5E-8 T 28-03-2018 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 Gene3D G3DSA:2.60.120.10 4 164 1.0E-7 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 224 239 7.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 239 255 7.4E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 Pfam PF02311 AraC-like ligand binding domain 21 102 7.9E-5 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 SUPERFAMILY SSF51182 14 182 5.34E-13 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 Gene3D G3DSA:1.10.10.60 213 260 3.5E-7 T 28-03-2018 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 210 251 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS11575 b6a50829ef70e4f36071886ffa336879 264 SMART SM00342 172 255 2.6E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS19405 710e0656f4db1fc1ea09564b3b47e922 97 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 96 25.2 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS19405 710e0656f4db1fc1ea09564b3b47e922 97 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 93 6.9E-30 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS19405 710e0656f4db1fc1ea09564b3b47e922 97 PIRSF PIRSF002736 1 96 2.0E-36 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS19405 710e0656f4db1fc1ea09564b3b47e922 97 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 10 81 1.0E-20 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS19405 710e0656f4db1fc1ea09564b3b47e922 97 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 84 5.3E-29 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CI104_RS17805 186c0792511160f3cb9b2523bba43789 274 Hamap MF_01623 Penicillin-insensitive murein endopeptidase [mepA]. 1 274 69.743 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CI104_RS17805 186c0792511160f3cb9b2523bba43789 274 SUPERFAMILY SSF55166 21 272 1.73E-102 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS17805 186c0792511160f3cb9b2523bba43789 274 Pfam PF03411 Penicillin-insensitive murein endopeptidase 36 270 1.2E-94 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CI104_RS17805 186c0792511160f3cb9b2523bba43789 274 Gene3D G3DSA:3.30.1380.10 20 274 6.4E-97 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS17805 186c0792511160f3cb9b2523bba43789 274 PIRSF PIRSF018455 1 274 1.1E-120 T 28-03-2018 IPR005073 Peptidase M74, penicillin-insensitive murein endopeptidase GO:0004252|GO:0006508|GO:0030288 CI104_RS03995 6da941a8e3969ef3562d966307eb4490 164 Hamap MF_00143 UPF0114 protein YqhA [yqhA]. 1 164 92.891 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CI104_RS03995 6da941a8e3969ef3562d966307eb4490 164 Pfam PF03350 Uncharacterized protein family, UPF0114 9 125 2.7E-35 T 28-03-2018 IPR005134 Uncharacterised protein family UPF0114 CI104_RS03995 6da941a8e3969ef3562d966307eb4490 164 TIGRFAM TIGR00645 HI0507: TIGR00645 family protein 1 163 3.8E-80 T 28-03-2018 IPR020761 Uncharacterised protein family UPF0114, bacteria CI104_RS10220 af79544d8b941232743a8ffb54df0f21 245 SMART SM00481 4 78 1.4E-20 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CI104_RS10220 af79544d8b941232743a8ffb54df0f21 245 SUPERFAMILY SSF89550 3 240 1.19E-63 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS10220 af79544d8b941232743a8ffb54df0f21 245 Gene3D G3DSA:3.20.20.140 6 232 4.1E-38 T 28-03-2018 CI104_RS10220 af79544d8b941232743a8ffb54df0f21 245 Hamap MF_01561 Probable phosphatase YcdX [ycdX]. 1 243 50.503 T 28-03-2018 IPR023710 Probable phosphatase YcdX GO:0008270 CI104_RS10220 af79544d8b941232743a8ffb54df0f21 245 Pfam PF02811 PHP domain 5 80 2.2E-8 T 28-03-2018 IPR004013 PHP domain GO:0003824 CI104_RS13870 a8383a8668021fc1faeae300d3e866d2 168 ProSitePatterns PS01265 Tpx family signature. 84 95 - T 28-03-2018 IPR018219 Thiol peroxidase conserved site GO:0016684|GO:0055114 CI104_RS13870 a8383a8668021fc1faeae300d3e866d2 168 Pfam PF08534 Redoxin 20 163 1.8E-29 T 28-03-2018 IPR013740 Redoxin GO:0016491 Reactome: R-HSA-3299685|Reactome: R-HSA-5628897 CI104_RS13870 a8383a8668021fc1faeae300d3e866d2 168 SUPERFAMILY SSF52833 4 164 1.14E-43 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS13870 a8383a8668021fc1faeae300d3e866d2 168 Gene3D G3DSA:3.40.30.10 6 168 4.2E-23 T 28-03-2018 CI104_RS13870 a8383a8668021fc1faeae300d3e866d2 168 Hamap MF_00269 Probable thiol peroxidase [tpx]. 4 167 38.91 T 28-03-2018 IPR002065 Putative thiol peroxidase Tpx GO:0008379|GO:0016209|GO:0055114 CI104_RS07440 2309a320357b977158d8118b8436a5d1 302 PIRSF PIRSF015582 1 302 6.1E-76 T 28-03-2018 IPR011206 Citrate lyase beta subunit-like CI104_RS07440 2309a320357b977158d8118b8436a5d1 302 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 15 234 6.1E-83 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CI104_RS07440 2309a320357b977158d8118b8436a5d1 302 Gene3D G3DSA:3.20.20.360 2 273 2.7E-52 T 28-03-2018 CI104_RS07440 2309a320357b977158d8118b8436a5d1 302 SUPERFAMILY SSF51621 12 244 3.49E-61 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS07440 2309a320357b977158d8118b8436a5d1 302 TIGRFAM TIGR01588 citE: citrate (pro-3S)-lyase, beta subunit 12 299 5.3E-135 T 28-03-2018 IPR006475 Citrate lyase, beta subunit, bacteria GO:0005737|GO:0006084|GO:0008816|GO:0009346 KEGG: 00720+4.1.3.34|MetaCyc: PWY-5392|MetaCyc: PWY-6038 CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 152 171 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 1.6E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 Gene3D G3DSA:3.40.50.720 45 256 2.2E-48 T 28-03-2018 CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 Gene3D G3DSA:3.40.50.720 1 44 7.2E-10 T 28-03-2018 CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 152 171 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 219 239 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 7 24 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 173 190 2.5E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 SUPERFAMILY SSF51735 5 254 4.15E-68 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 12 254 1.5E-53 T 28-03-2018 CI104_RS13175 39c3f32ae85269573602eea7cce786d6 257 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 139 167 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS26480 eb37882f48b49f20aa00cacc0b1c15e9 254 Gene3D G3DSA:1.10.443.10 26 230 3.5E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS26480 eb37882f48b49f20aa00cacc0b1c15e9 254 SUPERFAMILY SSF56349 40 228 1.24E-25 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS26480 eb37882f48b49f20aa00cacc0b1c15e9 254 Pfam PF00589 Phage integrase family 42 228 6.1E-30 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS26480 eb37882f48b49f20aa00cacc0b1c15e9 254 PIRSF PIRSF004576 4 253 3.7E-78 T 28-03-2018 IPR016423 Resolvase, Rsv CI104_RS08230 2222edd181865255f1b8d98f01766dcf 427 Pfam PF01095 Pectinesterase 196 340 7.6E-10 T 28-03-2018 IPR000070 Pectinesterase, catalytic GO:0005618|GO:0030599|GO:0042545 KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CI104_RS08230 2222edd181865255f1b8d98f01766dcf 427 SUPERFAMILY SSF51126 76 157 6.28E-37 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS08230 2222edd181865255f1b8d98f01766dcf 427 SUPERFAMILY SSF51126 407 419 6.28E-37 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS08230 2222edd181865255f1b8d98f01766dcf 427 SUPERFAMILY SSF51126 192 376 6.28E-37 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS08230 2222edd181865255f1b8d98f01766dcf 427 ProSitePatterns PS00503 Pectinesterase signature 2. 280 289 - T 28-03-2018 IPR033131 Pectinesterase, Asp active site KEGG: 00040+3.1.1.11|MetaCyc: PWY-1081|MetaCyc: PWY-7246|MetaCyc: PWY-7248 CI104_RS08230 2222edd181865255f1b8d98f01766dcf 427 Gene3D G3DSA:2.160.20.10 74 426 1.0E-48 T 28-03-2018 IPR012334 Pectin lyase fold CI104_RS12835 c2cdf91491c51c125afa6991575f143e 423 TIGRFAM TIGR03407 urea_ABC_UrtA: urea ABC transporter, urea binding protein 31 404 1.1E-179 T 28-03-2018 IPR017777 Urea ABC transporter, substrate-binding protein UrtA-like CI104_RS12835 c2cdf91491c51c125afa6991575f143e 423 Gene3D G3DSA:3.40.50.2300 26 157 6.2E-23 T 28-03-2018 CI104_RS12835 c2cdf91491c51c125afa6991575f143e 423 Gene3D G3DSA:3.40.50.2300 158 345 8.3E-29 T 28-03-2018 CI104_RS12835 c2cdf91491c51c125afa6991575f143e 423 Pfam PF13433 Periplasmic binding protein domain 31 406 1.2E-173 T 28-03-2018 CI104_RS12835 c2cdf91491c51c125afa6991575f143e 423 SUPERFAMILY SSF53822 30 408 3.66E-94 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 Gene3D G3DSA:3.40.190.10 179 262 2.7E-21 T 28-03-2018 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 Pfam PF03466 LysR substrate binding domain 89 292 1.5E-42 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 Gene3D G3DSA:3.40.190.10 93 178 5.1E-17 T 28-03-2018 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 31 41 4.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 41 52 4.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 20 31 4.3E-5 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 64 3.6E-20 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 SUPERFAMILY SSF53850 90 296 1.4E-44 T 28-03-2018 CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 SUPERFAMILY SSF46785 6 113 1.18E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05490 0796524ac12b4b7736964e5a3e00ba9b 304 Gene3D G3DSA:1.10.10.10 2 85 2.7E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 PIRSF PIRSF006250 17 299 2.8E-110 T 28-03-2018 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD Reactome: R-HSA-196807 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 TIGRFAM TIGR00078 nadC: nicotinate-nucleotide diphosphorylase (carboxylating) 27 296 2.1E-101 T 28-03-2018 IPR004393 Nicotinate-nucleotide pyrophosphorylase GO:0004514|GO:0019363 KEGG: 00760+2.4.2.19|MetaCyc: PWY-5316|MetaCyc: PWY-5653|MetaCyc: PWY-7342|Reactome: R-HSA-196807 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 Gene3D G3DSA:3.20.20.70 157 286 1.7E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 Pfam PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain 42 129 1.1E-24 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 Gene3D G3DSA:3.90.1170.20 11 156 1.4E-42 T 28-03-2018 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal GO:0016763 Reactome: R-HSA-196807 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 SUPERFAMILY SSF54675 12 130 4.47E-32 T 28-03-2018 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 SUPERFAMILY SSF51690 131 296 2.28E-58 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CI104_RS04985 57e1e9d9b95d345ad66dfed242571715 299 Pfam PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain 131 295 1.4E-59 T 28-03-2018 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal GO:0004514|GO:0009435 KEGG: 00760+6.3.4.21|MetaCyc: PWY-5381 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 SUPERFAMILY SSF50692 876 996 7.46E-23 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 Gene3D G3DSA:2.40.40.20 848 1021 4.5E-23 T 28-03-2018 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 SUPERFAMILY SSF53706 137 862 2.75E-112 T 28-03-2018 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 SUPERFAMILY SSF53706 72 110 2.75E-112 T 28-03-2018 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 Pfam PF01568 Molydopterin dinucleotide binding domain 888 995 1.3E-11 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 Pfam PF00384 Molybdopterin oxidoreductase 242 683 1.1E-15 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 Gene3D G3DSA:3.40.50.740 158 406 1.7E-22 T 28-03-2018 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 SMART SM00926 71 153 1.3E-15 T 28-03-2018 IPR006963 Molybdopterin oxidoreductase, 4Fe-4S domain GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 Gene3D G3DSA:2.20.25.90 64 157 6.3E-14 T 28-03-2018 CI104_RS12205 5580e35b47d347579833f152d4d6329f 1021 Gene3D G3DSA:3.40.50.740 453 786 9.7E-30 T 28-03-2018 CI104_RS02870 7ed2279a97fe8c049adf0cdc82bcbddf 226 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 18 226 2.5E-66 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin CI104_RS02870 7ed2279a97fe8c049adf0cdc82bcbddf 226 Gene3D G3DSA:2.40.160.40 22 226 2.2E-30 T 28-03-2018 CI104_RS02870 7ed2279a97fe8c049adf0cdc82bcbddf 226 SUPERFAMILY SSF56935 16 226 1.37E-11 T 28-03-2018 CI104_RS26850 ce1f773b066f7b58785722d6df9c4012 150 Pfam PF12120 Rifampin ADP-ribosyl transferase 20 122 1.1E-41 T 28-03-2018 IPR021975 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase CI104_RS25585 dbf410475b923aa8338bdbd6b04604b9 184 Gene3D G3DSA:3.40.630.30 1 184 5.2E-33 T 28-03-2018 CI104_RS25585 dbf410475b923aa8338bdbd6b04604b9 184 Pfam PF13523 Acetyltransferase (GNAT) domain 15 161 1.2E-40 T 28-03-2018 CI104_RS25585 dbf410475b923aa8338bdbd6b04604b9 184 SUPERFAMILY SSF55729 5 175 2.13E-47 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS25585 dbf410475b923aa8338bdbd6b04604b9 184 TIGRFAM TIGR04431 N6_acetyl_AAC6: aminoglycoside N(6')-acetyltransferase, AacA4 family 2 184 1.2E-116 T 28-03-2018 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type CI104_RS17620 a9a57a634933d7d57b992fe8af7ae02e 90 Gene3D G3DSA:3.40.50.2300 1 90 4.8E-20 T 28-03-2018 CI104_RS17620 a9a57a634933d7d57b992fe8af7ae02e 90 SUPERFAMILY SSF52794 1 87 2.62E-21 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS17620 a9a57a634933d7d57b992fe8af7ae02e 90 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 2 83 3.2E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS04690 b7329bb8f3c40a52c63c6c84393dd475 176 Hamap MF_01414 Glutathione-regulated potassium-efflux system ancillary protein KefF [kefF]. 1 173 53.6 T 28-03-2018 IPR023948 Glutathione-regulated potassium-efflux system ancillary protein KefF GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CI104_RS04690 b7329bb8f3c40a52c63c6c84393dd475 176 Gene3D G3DSA:3.40.50.360 1 176 1.6E-43 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS04690 b7329bb8f3c40a52c63c6c84393dd475 176 SUPERFAMILY SSF52218 2 170 3.72E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS04690 b7329bb8f3c40a52c63c6c84393dd475 176 Pfam PF02525 Flavodoxin-like fold 2 167 1.5E-40 T 28-03-2018 IPR003680 Flavodoxin-like fold CI104_RS21235 6fb2f558540c6ad72ba5f34726dc6973 343 Pfam PF05175 Methyltransferase small domain 167 333 4.2E-61 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS21235 6fb2f558540c6ad72ba5f34726dc6973 343 Hamap MF_01862 Ribosomal RNA small subunit methyltransferase C [rsmC]. 4 336 45.733 T 28-03-2018 IPR023543 rRNA small subunit methyltransferase C GO:0008649 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS21235 6fb2f558540c6ad72ba5f34726dc6973 343 Pfam PF08468 Methyltransferase small domain N-terminal 8 162 3.7E-57 T 28-03-2018 IPR013675 Methyltransferase small, N-terminal GO:0006364|GO:0008990 KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS21235 6fb2f558540c6ad72ba5f34726dc6973 343 Gene3D G3DSA:3.40.50.150 159 343 2.6E-34 T 28-03-2018 CI104_RS21235 6fb2f558540c6ad72ba5f34726dc6973 343 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 265 271 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS21235 6fb2f558540c6ad72ba5f34726dc6973 343 SUPERFAMILY SSF53335 154 315 3.29E-31 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS14395 4e04019842ca3a73f255c4c5af7ccaf9 81 Gene3D G3DSA:4.10.1210.10 1 81 5.1E-20 T 28-03-2018 IPR015073 Atu1913-like CI104_RS14395 4e04019842ca3a73f255c4c5af7ccaf9 81 Pfam PF08980 Domain of unknown function (DUF1883) 12 78 3.5E-7 T 28-03-2018 IPR015073 Atu1913-like CI104_RS14395 4e04019842ca3a73f255c4c5af7ccaf9 81 SUPERFAMILY SSF141099 1 80 6.02E-25 T 28-03-2018 IPR015073 Atu1913-like CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 Gene3D G3DSA:3.40.50.300 1 296 5.3E-62 T 28-03-2018 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 TIGRFAM TIGR00345 GET3_arsA_TRC40: transport-energizing ATPase, TRC40/GET3/ArsA family 12 293 2.1E-95 T 28-03-2018 IPR016300 Arsenical pump ATPase, ArsA/GET3 GO:0005524|GO:0016887 Reactome: R-HSA-381038 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 SMART SM00382 7 226 4.7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 SMART SM00382 326 520 0.18 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 SUPERFAMILY SSF52540 318 577 2.14E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 SUPERFAMILY SSF52540 7 263 6.28E-51 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 TIGRFAM TIGR04291 arsen_driv_ArsA: arsenical pump-driving ATPase 7 570 1.1E-286 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 PIRSF PIRSF001327 1 583 5.4E-268 T 28-03-2018 IPR027541 Arsenical pump-driving ATPase GO:0005524|GO:0015446|GO:0016887|GO:0071722 MetaCyc: PWY-4621 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 Gene3D G3DSA:3.40.50.300 311 582 3.2E-48 T 28-03-2018 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 Pfam PF02374 Anion-transporting ATPase 329 475 1.6E-31 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 Pfam PF02374 Anion-transporting ATPase 10 293 9.5E-88 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CI104_RS20860 4246c8c58f3e738cb4c8b434de481eca 583 Pfam PF02374 Anion-transporting ATPase 482 581 1.5E-6 T 28-03-2018 IPR025723 Anion-transporting ATPase-like domain Reactome: R-HSA-381038 CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 SUPERFAMILY SSF52467 182 352 3.0E-42 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 Pfam PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 379 525 4.8E-40 T 28-03-2018 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding GO:0003824|GO:0030976 CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 Pfam PF00205 Thiamine pyrophosphate enzyme, central domain 192 319 2.0E-29 T 28-03-2018 IPR012000 Thiamine pyrophosphate enzyme, central domain GO:0000287|GO:0030976 CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 Gene3D G3DSA:3.40.50.1220 190 338 1.4E-32 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 Pfam PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 4 170 7.3E-42 T 28-03-2018 IPR012001 Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain GO:0030976 CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 SUPERFAMILY SSF52518 357 557 9.58E-60 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 ProSitePatterns PS00187 Thiamine pyrophosphate enzymes signature. 416 435 - T 28-03-2018 IPR000399 TPP-binding enzyme, conserved site GO:0000287|GO:0030976 CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 Gene3D G3DSA:3.40.50.970 339 533 9.6E-42 T 28-03-2018 CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 SUPERFAMILY SSF52518 2 176 1.81E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS08795 7debc0ea812a0a81e469e26c281aad1d 572 Gene3D G3DSA:3.40.50.970 1 189 2.0E-43 T 28-03-2018 CI104_RS12185 64b0e27d4dbe99d48c31de8b2adc833b 222 SUPERFAMILY SSF161098 11 209 2.09E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12185 64b0e27d4dbe99d48c31de8b2adc833b 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 40 222 1.4E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12185 64b0e27d4dbe99d48c31de8b2adc833b 222 Gene3D G3DSA:1.10.3720.10 9 222 4.5E-33 T 28-03-2018 CI104_RS13355 b99380b8ffc05f44ff931904580870e5 532 Gene3D G3DSA:3.40.190.10 202 297 4.5E-26 T 28-03-2018 CI104_RS13355 b99380b8ffc05f44ff931904580870e5 532 SUPERFAMILY SSF53850 27 523 1.59E-151 T 28-03-2018 CI104_RS13355 b99380b8ffc05f44ff931904580870e5 532 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 451 6.7E-98 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS13355 b99380b8ffc05f44ff931904580870e5 532 Gene3D G3DSA:3.90.76.10 36 201 9.1E-35 T 28-03-2018 CI104_RS13355 b99380b8ffc05f44ff931904580870e5 532 PIRSF PIRSF002741 3 532 6.9E-112 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS13355 b99380b8ffc05f44ff931904580870e5 532 Gene3D G3DSA:3.10.105.10 298 502 2.1E-66 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF81660 344 542 2.83E-41 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Gene3D G3DSA:2.70.150.10 25 237 2.1E-46 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF56784 335 355 6.0E-61 T 28-03-2018 IPR023214 HAD-like domain CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF56784 493 742 6.0E-61 T 28-03-2018 IPR023214 HAD-like domain CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 95 359 2.3E-37 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 TIGRFAM TIGR01494 ATPase_P-type: HAD ATPase, P-type, family IC 609 732 5.1E-36 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 560 570 7.4E-41 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 639 658 7.4E-41 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 174 188 7.4E-41 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 538 549 7.4E-41 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 663 675 7.4E-41 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00119 P-type cation-transporting ATPase superfamily signature 337 351 7.4E-41 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Gene3D G3DSA:1.20.1110.10 596 902 5.9E-84 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Pfam PF00690 Cation transporter/ATPase, N-terminus 18 83 4.1E-17 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 496 514 1.2E-20 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 611 627 1.2E-20 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 671 696 1.2E-20 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 PRINTS PR00120 H+-transporting ATPase (proton pump) signature 639 655 1.2E-20 T 28-03-2018 IPR001757 P-type ATPase GO:0016021 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Pfam PF00122 E1-E2 ATPase 124 317 4.4E-50 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF81665 689 901 3.14E-114 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF81665 16 127 3.14E-114 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF81665 237 331 3.14E-114 T 28-03-2018 IPR023298 P-type ATPase, transmembrane domain Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Pfam PF00702 haloacid dehalogenase-like hydrolase 334 653 8.6E-22 T 28-03-2018 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Pfam PF00689 Cation transporting ATPase, C-terminus 724 893 2.1E-37 T 28-03-2018 IPR006068 Cation-transporting P-type ATPase, C-terminal Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 ProSitePatterns PS00154 E1-E2 ATPases phosphorylation site. 339 345 - T 28-03-2018 IPR018303 P-type ATPase, phosphorylation site Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 Gene3D G3DSA:3.40.1110.10 301 545 6.5E-36 T 28-03-2018 IPR023299 P-type ATPase, cytoplasmic domain N GO:0000166 Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SMART SM00831 16 89 1.3E-32 T 28-03-2018 IPR004014 Cation-transporting P-type ATPase, N-terminal Reactome: R-HSA-936837 CI104_RS23300 f5b802a6f98f56e19c8c8db00d98642e 902 SUPERFAMILY SSF81653 127 236 1.96E-29 T 28-03-2018 IPR008250 P-type ATPase, A domain Reactome: R-HSA-936837 CI104_RS21310 baca53abca256fd2ab05a114abc8496c 157 Hamap MF_01191 UPF0442 protein YjjB [yjjB]. 1 157 42.583 T 28-03-2018 IPR020914 Uncharacterised protein family UPF0442 CI104_RS21310 baca53abca256fd2ab05a114abc8496c 157 Pfam PF12821 Threonine/Serine exporter, ThrE 13 147 2.1E-34 T 28-03-2018 IPR024528 Threonine/Serine exporter, ThrE CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 Gene3D G3DSA:3.20.190.10 1 130 1.6E-37 T 28-03-2018 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 SUPERFAMILY SSF81624 2 138 1.7E-44 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 SUPERFAMILY SSF46946 130 222 7.59E-31 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 SUPERFAMILY SSF57716 217 269 4.28E-17 T 28-03-2018 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 Gene3D G3DSA:1.10.8.50 131 269 2.0E-51 T 28-03-2018 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 Pfam PF06827 Zinc finger found in FPG and IleRS 241 269 5.0E-9 T 28-03-2018 IPR010663 Zinc finger, FPG/IleRS-type Reactome: R-HSA-379726 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 Hamap MF_00103 Formamidopyrimidine-DNA glycosylase [mutM]. 1 269 44.435 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 SMART SM00898 2 115 1.1E-54 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 SMART SM01232 129 221 9.7E-49 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 TIGRFAM TIGR00577 fpg: DNA-formamidopyrimidine glycosylase 1 268 6.3E-107 T 28-03-2018 IPR020629 Formamidopyrimidine-DNA glycosylase GO:0003906|GO:0006281|GO:0008270|GO:0008534 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 ProSitePatterns PS01242 Zinc finger FPG-type signature. 244 268 - T 28-03-2018 IPR015887 DNA glycosylase/AP lyase, zinc finger domain, DNA-binding site GO:0003677|GO:0003906|GO:0006281|GO:0008270|GO:0016799 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 Pfam PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain 129 218 2.4E-31 T 28-03-2018 IPR015886 DNA glycosylase/AP lyase, H2TH DNA-binding GO:0003684|GO:0003906|GO:0006289|GO:0008270|GO:0016799 CI104_RS00530 213a4b04fa08ad425d92f609a2fd48e9 269 Pfam PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain 1 114 1.6E-31 T 28-03-2018 IPR012319 Formamidopyrimidine-DNA glycosylase, catalytic domain GO:0003684|GO:0003906|GO:0006284|GO:0008270|GO:0016799 CI104_RS22795 26764227815705da6dd42f4cc3044deb 177 Gene3D G3DSA:2.60.40.1090 31 177 1.8E-36 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22795 26764227815705da6dd42f4cc3044deb 177 Pfam PF00419 Fimbrial protein 33 177 1.5E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22795 26764227815705da6dd42f4cc3044deb 177 SUPERFAMILY SSF49401 32 177 6.96E-41 T 28-03-2018 IPR008966 Adhesion domain CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 Pfam PF17392 Urocanase C-terminal domain 351 544 2.5E-92 T 28-03-2018 IPR035401 Urocanase, C-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 TIGRFAM TIGR01228 hutU: urocanate hydratase 9 553 2.6E-301 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 Hamap MF_00577 Urocanate hydratase [hutU]. 2 555 49.717 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 ProSitePatterns PS01233 Urocanase signature. 441 456 - T 28-03-2018 IPR023636 Urocanase conserved site GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 Gene3D G3DSA:3.40.1770.10 195 554 5.2E-163 T 28-03-2018 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 Gene3D G3DSA:3.40.1770.10 9 151 1.9E-29 T 28-03-2018 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 PIRSF PIRSF001423 1 560 9.4E-294 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 Pfam PF17391 Urocanase N-terminal domain 11 137 9.2E-63 T 28-03-2018 IPR035400 Urocanase, N-terminal domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 SUPERFAMILY SSF111326 6 554 9.94E-260 T 28-03-2018 IPR023637 Urocanase GO:0016153 KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08250 712cb43d1dddecc766de8c1f67d2639b 561 Pfam PF01175 Urocanase Rossmann-like domain 140 348 1.8E-85 T 28-03-2018 IPR035085 Urocanase, Rossmann-like domain KEGG: 00340+4.2.1.49|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 93 117 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 Pfam PF13412 Winged helix-turn-helix DNA-binding 1 48 8.2E-11 T 28-03-2018 CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 Gene3D G3DSA:1.10.10.10 1 52 3.1E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 Gene3D G3DSA:3.40.1190.20 53 353 4.1E-48 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 Pfam PF00294 pfkB family carbohydrate kinase 58 347 3.0E-61 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 SUPERFAMILY SSF46785 1 54 7.71E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 303 316 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16935 ca0a87115a11c9d583b0c44ea0110cf5 363 SUPERFAMILY SSF53613 61 354 1.28E-53 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS14900 12d1334a496bfd3c1da97e8d36743397 196 Gene3D G3DSA:1.20.141.10 6 188 8.9E-48 T 28-03-2018 CI104_RS14900 12d1334a496bfd3c1da97e8d36743397 196 Pfam PF09374 Predicted Peptidoglycan domain 108 176 2.0E-16 T 28-03-2018 IPR018537 Peptidoglycan binding domain CI104_RS14900 12d1334a496bfd3c1da97e8d36743397 196 SUPERFAMILY SSF53955 10 179 3.37E-44 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS14900 12d1334a496bfd3c1da97e8d36743397 196 Pfam PF05838 Glycosyl hydrolase 108 15 104 6.4E-22 T 28-03-2018 IPR008565 Protein of unknown function DUF847 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 TIGRFAM TIGR03455 HisG_C-term: ATP phosphoribosyltransferase, C-terminal domain 200 298 8.1E-33 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 Pfam PF01634 ATP phosphoribosyltransferase 54 219 2.5E-48 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 Hamap MF_00079 ATP phosphoribosyltransferase [hisG]. 6 299 36.257 T 28-03-2018 IPR020621 ATP phosphoribosyltransferase HisG, long form GO:0000105|GO:0003879 KEGG: 00340+2.4.2.17 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 ProSitePatterns PS01316 ATP phosphoribosyltransferase signature. 156 177 - T 28-03-2018 IPR018198 ATP phosphoribosyltransferase, conserved site GO:0003879 KEGG: 00340+2.4.2.17 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 Gene3D G3DSA:3.40.190.10 129 223 3.6E-23 T 28-03-2018 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 TIGRFAM TIGR00070 hisG: ATP phosphoribosyltransferase 7 197 2.8E-58 T 28-03-2018 IPR013820 ATP phosphoribosyltransferase, catalytic domain GO:0000105|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 SUPERFAMILY SSF53850 6 224 1.71E-70 T 28-03-2018 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 Pfam PF08029 HisG, C-terminal domain 223 296 1.4E-24 T 28-03-2018 IPR013115 Histidine biosynthesis HisG, C-terminal GO:0000105|GO:0000287|GO:0003879|GO:0005737 KEGG: 00340+2.4.2.17 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 Gene3D G3DSA:3.40.190.10 1 128 2.6E-36 T 28-03-2018 CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 Gene3D G3DSA:3.30.70.120 227 298 2.5E-25 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CI104_RS16345 84afe01976fab949f5f251b6cf9c63d8 299 SUPERFAMILY SSF54913 226 298 7.45E-22 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 ProSitePatterns PS00793 Dihydropteroate synthase signature 2. 51 64 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 SUPERFAMILY SSF51717 6 274 7.59E-105 T 28-03-2018 IPR011005 Dihydropteroate synthase-like GO:0044237 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 Pfam PF00809 Pterin binding enzyme 18 257 2.6E-90 T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 Gene3D G3DSA:3.20.20.20 14 153 3.7E-59 T 28-03-2018 CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 Gene3D G3DSA:3.20.20.20 154 276 4.6E-49 T 28-03-2018 CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 ProSitePatterns PS00792 Dihydropteroate synthase signature 1. 17 32 - T 28-03-2018 IPR000489 Pterin-binding domain GO:0042558 Reactome: R-HSA-156581|Reactome: R-HSA-1614635|Reactome: R-HSA-196741|Reactome: R-HSA-3359467|Reactome: R-HSA-3359469 CI104_RS02820 79c531e40c3a9dc165e28317a843e068 282 TIGRFAM TIGR01496 DHPS: dihydropteroate synthase 17 271 7.6E-103 T 28-03-2018 IPR006390 Dihydropteroate synthase GO:0004156|GO:0009396 KEGG: 00790+2.5.1.15|MetaCyc: PWY-6614 CI104_RS12900 444be087ec3064a20857518e1018cb39 462 Gene3D G3DSA:3.40.309.10 252 443 5.0E-65 T 28-03-2018 CI104_RS12900 444be087ec3064a20857518e1018cb39 462 Pfam PF00171 Aldehyde dehydrogenase family 8 457 1.3E-135 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS12900 444be087ec3064a20857518e1018cb39 462 SUPERFAMILY SSF53720 7 460 2.88E-135 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS12900 444be087ec3064a20857518e1018cb39 462 Gene3D G3DSA:3.40.605.10 2 251 2.4E-68 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS12900 444be087ec3064a20857518e1018cb39 462 ProSitePatterns PS00070 Aldehyde dehydrogenases cysteine active site. 261 272 - T 28-03-2018 IPR016160 Aldehyde dehydrogenase, cysteine active site GO:0008152|GO:0016491|GO:0055114 CI104_RS19935 c1aa7013f9d0a18ceb116b532b319dda 253 Gene3D G3DSA:3.40.1210.10 1 247 8.2E-83 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CI104_RS19935 c1aa7013f9d0a18ceb116b532b319dda 253 Pfam PF01975 Survival protein SurE 3 180 3.7E-57 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CI104_RS19935 c1aa7013f9d0a18ceb116b532b319dda 253 Hamap MF_00060 5'/3'-nucleotidase SurE [surE]. 1 249 40.332 T 28-03-2018 IPR030048 Survival protein SurE GO:0008252 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CI104_RS19935 c1aa7013f9d0a18ceb116b532b319dda 253 SUPERFAMILY SSF64167 1 246 3.92E-83 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CI104_RS19935 c1aa7013f9d0a18ceb116b532b319dda 253 TIGRFAM TIGR00087 surE: 5'/3'-nucleotidase SurE 1 232 3.6E-79 T 28-03-2018 IPR002828 Survival protein SurE-like phosphatase/nucleotidase GO:0016787 KEGG: 00230+3.1.3.5|KEGG: 00240+3.1.3.5|KEGG: 00760+3.1.3.5|MetaCyc: PWY-5381|MetaCyc: PWY-5695|MetaCyc: PWY-6596|MetaCyc: PWY-6606|MetaCyc: PWY-6607|MetaCyc: PWY-6608|MetaCyc: PWY-7185|MetaCyc: PWY-7821 CI104_RS12480 3263a085c34aaeb5644175dd09ad66bd 201 SUPERFAMILY SSF47616 83 199 2.92E-29 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS12480 3263a085c34aaeb5644175dd09ad66bd 201 Gene3D G3DSA:3.40.30.10 1 99 4.0E-18 T 28-03-2018 CI104_RS12480 3263a085c34aaeb5644175dd09ad66bd 201 SUPERFAMILY SSF52833 1 79 2.01E-17 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS12480 3263a085c34aaeb5644175dd09ad66bd 201 Gene3D G3DSA:1.20.1050.10 100 201 7.6E-24 T 28-03-2018 CI104_RS12480 3263a085c34aaeb5644175dd09ad66bd 201 Pfam PF00043 Glutathione S-transferase, C-terminal domain 102 189 2.4E-14 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS12480 3263a085c34aaeb5644175dd09ad66bd 201 Pfam PF13409 Glutathione S-transferase, N-terminal domain 14 75 6.0E-9 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS24895 2d3b024c68ce9eeea29d170a538aed53 225 Hamap MF_02027 dTDP-fucosamine acetyltransferase [wecD]. 44 225 43.561 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CI104_RS24895 2d3b024c68ce9eeea29d170a538aed53 225 SUPERFAMILY SSF55729 44 219 1.49E-18 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS24895 2d3b024c68ce9eeea29d170a538aed53 225 TIGRFAM TIGR02382 wecD_rffC: TDP-D-fucosamine acetyltransferase 44 225 2.6E-89 T 28-03-2018 IPR012752 dTDP-fucosamine acetyltransferase WecD GO:0008080|GO:0009246 KEGG: 00071+2.3.1.21|MetaCyc: PWY-6111|MetaCyc: PWY-7315 CI104_RS24895 2d3b024c68ce9eeea29d170a538aed53 225 Gene3D G3DSA:3.40.630.30 88 225 3.5E-16 T 28-03-2018 CI104_RS08415 a59d88d9c58782968c4aec000d054653 322 SUPERFAMILY SSF52418 79 320 1.7E-48 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS08415 a59d88d9c58782968c4aec000d054653 322 SUPERFAMILY SSF47648 7 72 2.09E-14 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS08415 a59d88d9c58782968c4aec000d054653 322 Pfam PF00591 Glycosyl transferase family, a/b domain 95 320 1.1E-4 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS08415 a59d88d9c58782968c4aec000d054653 322 Gene3D G3DSA:3.40.1030.10 80 322 5.8E-41 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS08415 a59d88d9c58782968c4aec000d054653 322 Gene3D G3DSA:1.20.970.10 1 71 1.5E-15 T 28-03-2018 CI104_RS08415 a59d88d9c58782968c4aec000d054653 322 Pfam PF02885 Glycosyl transferase family, helical bundle domain 5 70 3.7E-11 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 Pfam PF00696 Amino acid kinase family 6 234 1.7E-44 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 Gene3D G3DSA:2.30.130.10 274 366 1.1E-29 T 28-03-2018 IPR002478 PUA domain GO:0003723 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 SUPERFAMILY SSF53633 6 256 4.71E-65 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 PIRSF PIRSF000729 1 367 5.2E-146 T 28-03-2018 IPR011529 Glutamate 5-kinase GO:0004349|GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 SMART SM00359 276 359 1.7E-22 T 28-03-2018 IPR002478 PUA domain GO:0003723 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 SUPERFAMILY SSF88697 276 365 1.49E-23 T 28-03-2018 IPR015947 PUA-like domain CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 Gene3D G3DSA:3.40.1160.10 1 265 4.1E-63 T 28-03-2018 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 PRINTS PR00474 Glutamate 5-kinase family signature 116 137 1.6E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 PRINTS PR00474 Glutamate 5-kinase family signature 76 104 1.6E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 PRINTS PR00474 Glutamate 5-kinase family signature 209 229 1.6E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 PRINTS PR00474 Glutamate 5-kinase family signature 42 56 1.6E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 PRINTS PR00474 Glutamate 5-kinase family signature 148 175 1.6E-56 T 28-03-2018 IPR001057 Glutamate/acetylglutamate kinase Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 ProSitePatterns PS00902 Glutamate 5-kinase signature. 207 224 - T 28-03-2018 IPR019797 Glutamate 5-kinase, conserved site GO:0004349|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 TIGRFAM TIGR01027 proB: glutamate 5-kinase 5 365 9.1E-156 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 Pfam PF01472 PUA domain 276 350 2.0E-22 T 28-03-2018 IPR002478 PUA domain GO:0003723 CI104_RS05780 8cec993245c427798359c2a6dd47efb9 367 Hamap MF_00456 Glutamate 5-kinase [proB]. 5 259 36.034 T 28-03-2018 IPR005715 Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase GO:0005737|GO:0006561 KEGG: 00330+2.7.2.11|KEGG: 00332+2.7.2.11|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 6 240 2.1E-23 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 ProSitePatterns PS01229 Hypothetical cof family signature 2. 221 243 - T 28-03-2018 CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 Gene3D G3DSA:3.40.50.1000 1 115 1.7E-17 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 Gene3D G3DSA:3.40.50.1000 144 270 9.8E-21 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 ProSitePatterns PS01228 Hypothetical cof family signature 1. 5 16 - T 28-03-2018 CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 267 2.7E-64 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 SUPERFAMILY SSF56784 1 271 1.42E-63 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08220 3d89cdcad5d0745a1fba9b8e03c28d28 272 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 267 3.1E-70 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS03815 970a1daa32d3ab2e36dbb9acac832030 386 SUPERFAMILY SSF56059 1 168 1.59E-95 T 28-03-2018 CI104_RS03815 970a1daa32d3ab2e36dbb9acac832030 386 SUPERFAMILY SSF56059 266 383 1.59E-95 T 28-03-2018 CI104_RS03815 970a1daa32d3ab2e36dbb9acac832030 386 SUPERFAMILY SSF52440 174 279 3.74E-39 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS03815 970a1daa32d3ab2e36dbb9acac832030 386 Pfam PF03738 Glutathionylspermidine synthase preATP-grasp 12 384 1.1E-161 T 28-03-2018 IPR005494 Glutathionylspermidine synthase, pre-ATP-grasp-like domain CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 Gene3D G3DSA:3.40.50.300 1 165 1.2E-28 T 28-03-2018 CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 SMART SM00490 262 345 2.5E-11 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 Gene3D G3DSA:3.40.50.300 226 359 8.8E-19 T 28-03-2018 CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 Pfam PF04851 Type III restriction enzyme, res subunit 3 154 1.4E-24 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 Pfam PF00271 Helicase conserved C-terminal domain 241 343 3.1E-14 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 SMART SM00487 1 185 3.7E-20 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 SUPERFAMILY SSF57829 423 466 7.69E-7 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 SUPERFAMILY SSF52540 237 361 3.6E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17060 80fcfa85835a70f0421e1286c2866d6a 586 SUPERFAMILY SSF52540 50 169 3.6E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Pfam PF13247 4Fe-4S dicluster domain 116 193 1.6E-13 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 183 194 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Gene3D G3DSA:3.30.70.20 186 208 4.7E-5 T 28-03-2018 CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Pfam PF12800 4Fe-4S binding domain 67 78 0.12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 156 167 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Gene3D G3DSA:3.30.70.20 70 130 8.7E-12 T 28-03-2018 CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 SUPERFAMILY SSF54862 61 205 3.7E-38 T 28-03-2018 CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Gene3D G3DSA:3.30.70.20 161 185 3.3E-11 T 28-03-2018 CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Gene3D G3DSA:3.30.70.20 131 160 2.6E-9 T 28-03-2018 CI104_RS12235 ac87974d758b8f23c94ef7953890cee7 208 Gene3D G3DSA:3.30.70.20 37 69 0.1 T 28-03-2018 CI104_RS03930 e0265ae7d971b1893863cc906d89eba0 136 Gene3D G3DSA:2.60.40.1120 28 107 1.6E-6 T 28-03-2018 CI104_RS03930 e0265ae7d971b1893863cc906d89eba0 136 Pfam PF13620 Carboxypeptidase regulatory-like domain 29 69 2.0E-7 T 28-03-2018 CI104_RS03930 e0265ae7d971b1893863cc906d89eba0 136 SUPERFAMILY SSF49464 29 94 1.14E-6 T 28-03-2018 IPR008969 Carboxypeptidase-like, regulatory domain CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 Hamap MF_00605 tRNA (guanine-N(1)-)-methyltransferase [trmD]. 1 255 119.426 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 TIGRFAM TIGR00088 trmD: tRNA (guanine(37)-N(1))-methyltransferase 2 234 4.1E-110 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 Gene3D G3DSA:1.10.1270.20 170 254 5.3E-36 T 28-03-2018 CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 PIRSF PIRSF000386 1 253 1.7E-103 T 28-03-2018 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria GO:0008033|GO:0052906 KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 SUPERFAMILY SSF75217 2 247 1.64E-102 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 Pfam PF01746 tRNA (Guanine-1)-methyltransferase 23 221 5.3E-71 T 28-03-2018 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain KEGG: 00340+2.1.1.22|MetaCyc: PWY-6829|MetaCyc: PWY-7285|MetaCyc: PWY-7286 CI104_RS19020 a0f4fb0bfc05bf84008f5bb6ae3febf3 255 Gene3D G3DSA:3.40.1280.10 1 169 2.9E-73 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 SMART SM00062 27 256 1.4E-70 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 Gene3D G3DSA:3.40.190.10 151 260 4.5E-15 T 28-03-2018 CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 7.0E-63 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 Gene3D G3DSA:3.40.190.10 14 150 5.0E-35 T 28-03-2018 CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 2.2E-101 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS17685 a83deeeac231f926527623f4cceb0cac 260 SUPERFAMILY SSF53850 1 257 3.26E-65 T 28-03-2018 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 Hamap MF_00417 Pyrrolidone-carboxylate peptidase [pcp]. 2 200 40.805 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 ProSitePatterns PS01334 Pyrrolidone-carboxylate peptidase cysteine active site. 130 144 - T 28-03-2018 IPR033694 Pyroglutamyl peptidase I, Cys active site CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 161 173 3.4E-47 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 4 27 3.4E-47 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 132 148 3.4E-47 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 62 74 3.4E-47 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 PRINTS PR00706 Pyroglutamyl peptidase I (C15) family signature 80 100 3.4E-47 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 PIRSF PIRSF015592 1 212 4.7E-84 T 28-03-2018 IPR000816 Peptidase C15, pyroglutamyl peptidase I GO:0005829|GO:0006508|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 Pfam PF01470 Pyroglutamyl peptidase 3 201 4.4E-81 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 SUPERFAMILY SSF53182 1 214 1.7E-72 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 ProSitePatterns PS01333 Pyrrolidone-carboxylate peptidase glutamic acid active site. 69 85 - T 28-03-2018 IPR033693 Pyroglutamyl peptidase I, Glu active site CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 TIGRFAM TIGR00504 pyro_pdase: pyroglutamyl-peptidase I 4 211 7.1E-88 T 28-03-2018 IPR029762 Pyroglutamyl peptidase I, bacterial-type GO:0005829|GO:0006508|GO:0008234|GO:0016920 CI104_RS07860 cbe01654f069e28f9035ed835f8b9c61 214 Gene3D G3DSA:3.40.630.20 1 214 1.2E-64 T 28-03-2018 IPR016125 Peptidase C15, pyroglutamyl peptidase I-like CI104_RS09285 8a5a129a5a9110f79b81572a86edcdb5 220 Hamap MF_00789 UPF0319 protein YccT [yccT]. 3 216 25.763 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 CI104_RS09285 8a5a129a5a9110f79b81572a86edcdb5 220 Pfam PF09829 Uncharacterized protein conserved in bacteria (DUF2057) 22 213 1.4E-44 T 28-03-2018 IPR018635 Uncharacterised protein family UPF0319 CI104_RS01515 eaab4b60c4744c134bc286b8bcbb088c 231 PIRSF PIRSF006232 1 230 1.3E-55 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CI104_RS01515 eaab4b60c4744c134bc286b8bcbb088c 231 Gene3D G3DSA:2.60.120.10 132 231 4.0E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS01515 eaab4b60c4744c134bc286b8bcbb088c 231 Pfam PF02678 Pirin 9 119 1.2E-37 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CI104_RS01515 eaab4b60c4744c134bc286b8bcbb088c 231 SUPERFAMILY SSF51182 1 231 1.85E-79 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS01515 eaab4b60c4744c134bc286b8bcbb088c 231 Gene3D G3DSA:2.60.120.10 11 131 3.7E-48 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS00080 83c525dd90faea5d8633c5922e623fea 142 Pfam PF00011 Hsp20/alpha crystallin family 39 135 3.2E-20 T 28-03-2018 IPR002068 Alpha crystallin/Hsp20 domain CI104_RS00080 83c525dd90faea5d8633c5922e623fea 142 Gene3D G3DSA:2.60.40.790 5 135 1.8E-20 T 28-03-2018 IPR008978 HSP20-like chaperone CI104_RS00080 83c525dd90faea5d8633c5922e623fea 142 Hamap MF_02001 Small heat shock protein IbpB [ibpB]. 1 142 45.574 T 28-03-2018 IPR022848 Small heat shock protein IbpB CI104_RS00080 83c525dd90faea5d8633c5922e623fea 142 SUPERFAMILY SSF49764 29 134 1.46E-19 T 28-03-2018 IPR008978 HSP20-like chaperone CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 SUPERFAMILY SSF53067 132 300 1.49E-40 T 28-03-2018 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 SUPERFAMILY SSF53067 7 128 5.5E-37 T 28-03-2018 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 SUPERFAMILY SSF109604 307 493 2.67E-45 T 28-03-2018 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 Gene3D G3DSA:1.10.3210.10 324 458 0.0028 T 28-03-2018 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 PIRSF PIRSF001267 1 494 5.9E-185 T 28-03-2018 IPR030673 Pyrophosphatase, GppA/Ppx-type KEGG: 00230+3.6.1.40 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 Hamap MF_01550 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase [gppA]. 2 494 55.273 T 28-03-2018 IPR023709 Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase GO:0008894|GO:0015974 KEGG: 00230+3.6.1.40 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 Pfam PF02541 Ppx/GppA phosphatase family 21 301 2.9E-101 T 28-03-2018 IPR003695 Ppx/GppA phosphatase KEGG: 00230+3.6.1.40 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 Gene3D G3DSA:3.30.420.150 121 299 7.6E-35 T 28-03-2018 CI104_RS24950 46195dd722a3087f444b24d96ff3aa12 494 Gene3D G3DSA:3.30.420.40 2 120 1.6E-39 T 28-03-2018 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 Gene3D G3DSA:1.10.3860.10 1 408 1.1E-114 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 292 318 5.3E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 192 211 5.3E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 7 27 5.3E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 327 346 5.3E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 74 99 5.3E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 PRINTS PR00173 Glutamate-aspartate symporter signature 145 167 5.3E-30 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 SUPERFAMILY SSF118215 9 401 1.44E-121 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 Hamap MF_01300 C4-dicarboxylate transport protein [dctA]. 2 428 39.093 T 28-03-2018 IPR023954 C4-dicarboxylate transport protein GO:0006835|GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 ProSitePatterns PS00714 Sodium:dicarboxylate symporter family signature 2. 295 318 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 Pfam PF00375 Sodium:dicarboxylate symporter family 9 401 2.3E-111 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS01080 29a2717bd667078bfd3be06cb5dc935b 428 ProSitePatterns PS00713 Sodium:dicarboxylate symporter family signature 1. 36 51 - T 28-03-2018 IPR018107 Sodium:dicarboxylate symporter, conserved site CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 Pfam PF00460 Flagella basal body rod protein 4 33 1.2E-11 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 348 425 3.3E-20 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 9 29 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 1 408 3.6E-96 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 Gene3D G3DSA:2.60.98.20 146 308 2.2E-28 T 28-03-2018 IPR011491 Flagellar hook protein FlgE CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 Pfam PF07559 Flagellar basal body protein FlaE 172 307 9.6E-20 T 28-03-2018 IPR011491 Flagellar hook protein FlgE CI104_RS10440 fcd716c3e4c68f470dc95f9c1454b220 426 SUPERFAMILY SSF117143 73 387 6.02E-81 T 28-03-2018 CI104_RS04975 1163b36b05423202359f767739c011e5 461 Gene3D G3DSA:3.40.50.300 187 461 8.8E-51 T 28-03-2018 CI104_RS04975 1163b36b05423202359f767739c011e5 461 SUPERFAMILY SSF52540 84 454 7.83E-86 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04975 1163b36b05423202359f767739c011e5 461 ProSitePatterns PS00662 Bacterial type II secretion system protein E signature. 281 295 - T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CI104_RS04975 1163b36b05423202359f767739c011e5 461 Pfam PF00437 Type II/IV secretion system protein 92 353 7.3E-84 T 28-03-2018 IPR001482 Type II secretion system protein E GO:0005524|GO:0006810 CI104_RS04975 1163b36b05423202359f767739c011e5 461 Gene3D G3DSA:3.30.450.90 50 186 2.3E-38 T 28-03-2018 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Pfam PF03610 PTS system fructose IIA component 574 653 4.6E-5 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Gene3D G3DSA:1.10.10.10 2 73 2.9E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Gene3D G3DSA:3.40.50.300 103 322 1.7E-24 T 28-03-2018 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 SUPERFAMILY SSF63520 465 557 4.19E-5 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 SMART SM00382 133 282 4.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 SUPERFAMILY SSF52540 111 346 2.53E-38 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Pfam PF00874 PRD domain 848 930 2.9E-9 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Gene3D G3DSA:1.10.1790.10 464 559 1.1E-4 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Gene3D G3DSA:1.10.1790.10 836 932 5.6E-9 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 SUPERFAMILY SSF53062 574 665 3.14E-10 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Gene3D G3DSA:3.40.50.510 560 692 8.1E-14 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Pfam PF00158 Sigma-54 interaction domain 111 274 3.1E-47 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 SUPERFAMILY SSF63520 829 930 1.7E-10 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS00285 2f31f4902fc275d634382ca07ac3f293 932 Gene3D G3DSA:3.40.50.2300 705 802 1.1E-5 T 28-03-2018 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 Gene3D G3DSA:3.30.420.40 274 550 5.7E-50 T 28-03-2018 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 SUPERFAMILY SSF53067 285 543 3.84E-42 T 28-03-2018 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 SUPERFAMILY SSF53067 5 284 6.48E-21 T 28-03-2018 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 TIGRFAM TIGR01234 L-ribulokinase: ribulokinase 2 552 3.2E-268 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 Hamap MF_00520 Ribulokinase [araB]. 1 558 59.806 T 28-03-2018 IPR005929 Ribulokinase GO:0005524|GO:0008741|GO:0019569 KEGG: 00040+2.7.1.16 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 291 501 1.8E-36 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS04770 68342d6d5931f742755b625b3b4a79b7 569 Gene3D G3DSA:3.30.420.40 1 273 5.1E-38 T 28-03-2018 CI104_RS27310 ab6c27ae1485b0aec1f93b119a27f16c 476 Hamap MF_00675 Uronate isomerase [uxaC]. 2 469 50.525 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CI104_RS27310 ab6c27ae1485b0aec1f93b119a27f16c 476 Pfam PF02614 Glucuronate isomerase 1 467 3.8E-225 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CI104_RS27310 ab6c27ae1485b0aec1f93b119a27f16c 476 Gene3D G3DSA:3.20.20.140 87 469 1.7E-156 T 28-03-2018 CI104_RS27310 ab6c27ae1485b0aec1f93b119a27f16c 476 Gene3D G3DSA:3.20.20.140 2 86 4.2E-24 T 28-03-2018 CI104_RS27310 ab6c27ae1485b0aec1f93b119a27f16c 476 SUPERFAMILY SSF51556 3 467 2.02E-181 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS27585 8addc801046f41a9caa4de80c585d86a 100 SUPERFAMILY SSF46689 17 92 4.12E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27585 8addc801046f41a9caa4de80c585d86a 100 Pfam PF01527 Transposase 16 89 1.7E-9 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CI104_RS27585 8addc801046f41a9caa4de80c585d86a 100 Gene3D G3DSA:1.10.10.60 22 99 2.0E-14 T 28-03-2018 CI104_RS11085 2e406ff2bf355a9a1becb30dfa7ef047 128 SUPERFAMILY SSF103084 2 121 3.14E-29 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CI104_RS11085 2e406ff2bf355a9a1becb30dfa7ef047 128 Pfam PF05866 Endodeoxyribonuclease RusA 6 119 8.2E-17 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CI104_RS11085 2e406ff2bf355a9a1becb30dfa7ef047 128 PIRSF PIRSF001007 1 125 2.9E-48 T 28-03-2018 IPR016281 Crossover junction endodeoxyribonuclease, RusA GO:0008821 CI104_RS11085 2e406ff2bf355a9a1becb30dfa7ef047 128 Gene3D G3DSA:3.30.1330.70 1 124 1.1E-28 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CI104_RS12855 987d3e5e10d4b8692a348ec608f4f7aa 232 Gene3D G3DSA:3.40.50.300 1 227 3.2E-55 T 28-03-2018 CI104_RS12855 987d3e5e10d4b8692a348ec608f4f7aa 232 SMART SM00382 26 219 1.9E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS12855 987d3e5e10d4b8692a348ec608f4f7aa 232 SUPERFAMILY SSF52540 2 222 8.72E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12855 987d3e5e10d4b8692a348ec608f4f7aa 232 TIGRFAM TIGR03410 urea_trans_UrtE: urea ABC transporter, ATP-binding protein UrtE 2 232 9.8E-106 T 28-03-2018 IPR017780 ABC transporter, urea, ATP-binding protein, UrtE CI104_RS12855 987d3e5e10d4b8692a348ec608f4f7aa 232 Pfam PF00005 ABC transporter 17 161 3.8E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS15290 331253184d4366057b78f66a1eccfbd4 219 Gene3D G3DSA:1.10.3680.10 75 217 1.2E-15 T 28-03-2018 IPR029024 TerB-like CI104_RS15290 331253184d4366057b78f66a1eccfbd4 219 SUPERFAMILY SSF158682 88 211 2.22E-18 T 28-03-2018 CI104_RS15290 331253184d4366057b78f66a1eccfbd4 219 Pfam PF04391 Protein of unknown function (DUF533) 33 209 5.9E-49 T 28-03-2018 IPR007486 Inner membrane protein YebE CI104_RS06995 a1adb4e52dcdea7f76e1411ed7e79350 174 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 164 2.4E-33 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CI104_RS01245 e02351345229affee2edd49042274966 524 TIGRFAM TIGR02294 nickel_nikA: nickel ABC transporter, nickel/metallophore periplasmic binding protein 22 520 2.8E-243 T 28-03-2018 IPR011980 Nickel ABC transporter, substrate-binding protein NikA GO:0015675|GO:0016151|GO:0020037 CI104_RS01245 e02351345229affee2edd49042274966 524 Gene3D G3DSA:3.10.105.10 278 493 2.7E-50 T 28-03-2018 CI104_RS01245 e02351345229affee2edd49042274966 524 Gene3D G3DSA:3.90.76.10 35 179 7.1E-32 T 28-03-2018 CI104_RS01245 e02351345229affee2edd49042274966 524 Gene3D G3DSA:3.40.190.10 180 277 1.3E-24 T 28-03-2018 CI104_RS01245 e02351345229affee2edd49042274966 524 PIRSF PIRSF002741 17 519 1.1E-88 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS01245 e02351345229affee2edd49042274966 524 SUPERFAMILY SSF53850 27 516 1.03E-125 T 28-03-2018 CI104_RS01245 e02351345229affee2edd49042274966 524 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 68 433 3.4E-88 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS03100 075f2e9b2a9a63adc62f4c61b77d7ebe 274 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 86 267 9.0E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS03100 075f2e9b2a9a63adc62f4c61b77d7ebe 274 Gene3D G3DSA:1.10.3720.10 3 261 1.2E-42 T 28-03-2018 CI104_RS03100 075f2e9b2a9a63adc62f4c61b77d7ebe 274 SUPERFAMILY SSF161098 7 274 1.5E-71 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 ProSitePatterns PS00356 LacI-type HTH domain signature. 4 22 - T 28-03-2018 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 13 23 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 PRINTS PR00036 LacI bacterial regulatory protein HTH signature 3 13 1.7E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 Pfam PF00356 Bacterial regulatory proteins, lacI family 3 48 5.4E-19 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 SUPERFAMILY SSF53822 60 340 4.91E-93 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 Gene3D G3DSA:1.10.260.40 2 54 9.4E-20 T 28-03-2018 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 SUPERFAMILY SSF47413 1 59 1.29E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 Gene3D G3DSA:3.40.50.2300 55 176 1.2E-30 T 28-03-2018 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 Pfam PF13377 Periplasmic binding protein-like domain 171 331 1.8E-39 T 28-03-2018 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 Gene3D G3DSA:3.40.50.2300 177 335 1.1E-46 T 28-03-2018 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 SMART SM00354 1 71 3.0E-37 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS12355 09c7ca5d82977534ac0dbb70d201d690 341 Hamap MF_01277 HTH-type transcriptional repressor PurR [purR]. 1 335 58.887 T 28-03-2018 IPR023588 Transcription regulator HTH, PurR GO:0006355 CI104_RS06125 f45eaab6cca7aabc1c4d107d31de6477 400 Pfam PF12320 Type 5 capsule protein repressor C-terminal domain 276 373 1.3E-23 T 28-03-2018 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CI104_RS06125 f45eaab6cca7aabc1c4d107d31de6477 400 Pfam PF00149 Calcineurin-like phosphoesterase 1 224 5.1E-15 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS06125 f45eaab6cca7aabc1c4d107d31de6477 400 SUPERFAMILY SSF56300 1 335 1.32E-59 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06125 f45eaab6cca7aabc1c4d107d31de6477 400 Gene3D G3DSA:3.60.21.10 1 64 1.8E-17 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06125 f45eaab6cca7aabc1c4d107d31de6477 400 Gene3D G3DSA:3.60.21.10 65 277 1.6E-21 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06125 f45eaab6cca7aabc1c4d107d31de6477 400 TIGRFAM TIGR00619 sbcd: exonuclease SbcCD, D subunit 1 254 7.9E-89 T 28-03-2018 IPR004593 Nuclease SbcCD subunit D GO:0004519|GO:0006259|GO:0008408 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 Hamap MF_01082 tRNA pseudouridine synthase D [truD]. 5 342 28.781 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 TIGRFAM TIGR00094 tRNA_TruD_broad: tRNA pseudouridine synthase, TruD family 3 341 2.2E-97 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 ProSitePatterns PS01268 Uncharacterized protein family UPF0024 signature. 77 90 - T 28-03-2018 IPR020119 Pseudouridine synthase TruD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 Reactome: R-HSA-6782315 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 Gene3D G3DSA:3.30.2340.10 167 302 2.1E-29 T 28-03-2018 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 188 337 1.1E-19 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 Pfam PF01142 tRNA pseudouridine synthase D (TruD) 7 167 8.1E-42 T 28-03-2018 IPR001656 Pseudouridine synthase, TruD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS19940 05a4746ad553ac7525fde87a8c9a530a 349 SUPERFAMILY SSF55120 3 339 3.6E-103 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 73 93 6.5E-42 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 13 30 6.5E-42 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 97 119 6.5E-42 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 PRINTS PR01594 Bacterial protein-transport SecB chaperone protein signature 123 141 6.5E-42 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 Hamap MF_00821 Protein-export protein SecB [secB]. 1 145 33.593 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 Gene3D G3DSA:3.10.420.10 1 153 3.4E-56 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 Pfam PF02556 Preprotein translocase subunit SecB 5 144 6.1E-58 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 SUPERFAMILY SSF54611 2 141 8.28E-54 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS00660 f9d244fc87f22d5c01428a53b5b6b298 155 TIGRFAM TIGR00809 secB: protein-export chaperone SecB 5 147 6.0E-71 T 28-03-2018 IPR003708 Bacterial protein export chaperone SecB GO:0015031|GO:0051082|GO:0051262 CI104_RS04280 8f8ffe6bc9587d2caeb2efd38bc61f32 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 52 68 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS04280 8f8ffe6bc9587d2caeb2efd38bc61f32 147 SUPERFAMILY SSF55804 1 145 2.62E-32 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS04280 8f8ffe6bc9587d2caeb2efd38bc61f32 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 9.7E-29 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS04280 8f8ffe6bc9587d2caeb2efd38bc61f32 147 Gene3D G3DSA:3.40.930.10 1 147 8.5E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS20020 69f80ceff5d7208ad38af50246c39962 229 Hamap MF_01235 Putative N-acetylmannosamine-6-phosphate 2-epimerase [nanE]. 6 228 41.262 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CI104_RS20020 69f80ceff5d7208ad38af50246c39962 229 Pfam PF04131 Putative N-acetylmannosamine-6-phosphate epimerase 30 228 3.1E-70 T 28-03-2018 IPR007260 Putative N-acetylmannosamine-6-phosphate epimerase GO:0006051|GO:0047465 KEGG: 00520+5.1.3.9 CI104_RS20020 69f80ceff5d7208ad38af50246c39962 229 Gene3D G3DSA:3.20.20.70 1 227 5.8E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS20020 69f80ceff5d7208ad38af50246c39962 229 SUPERFAMILY SSF51366 6 225 3.06E-62 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SMART SM00487 23 307 3.5E-4 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SUPERFAMILY SSF52540 199 271 8.62E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SUPERFAMILY SSF52540 46 97 8.62E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SUPERFAMILY SSF52540 451 465 8.62E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SUPERFAMILY SSF52540 500 670 8.62E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 Pfam PF06733 DEAD_2 196 264 8.8E-8 T 28-03-2018 IPR010614 DEAD2 GO:0003677|GO:0004003|GO:0005524 CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 Pfam PF13307 Helicase C-terminal domain 531 688 5.0E-25 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 Gene3D G3DSA:3.40.50.300 24 483 2.3E-27 T 28-03-2018 CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SMART SM00488 18 294 0.0054 T 28-03-2018 IPR006554 Helicase-like, DEXD box c2 type GO:0004003|GO:0016818 CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 Gene3D G3DSA:3.40.50.300 504 679 9.9E-5 T 28-03-2018 CI104_RS08410 8669e063c1450ee953b830cb3ea19f08 716 SMART SM00491 544 676 4.5E-38 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CI104_RS04645 b452b7b813d462a4749530ab33084e39 405 Pfam PF02515 CoA-transferase family III 12 378 1.9E-78 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 CI104_RS04645 b452b7b813d462a4749530ab33084e39 405 SUPERFAMILY SSF89796 5 401 1.44E-99 T 28-03-2018 IPR023606 CoA-transferase family III domain CI104_RS04645 b452b7b813d462a4749530ab33084e39 405 Hamap MF_01050 L-carnitine CoA-transferase [caiB]. 1 405 97.125 T 28-03-2018 IPR023452 L-carnitine CoA-transferase CaiB GO:0009437|GO:0016782 CI104_RS04645 b452b7b813d462a4749530ab33084e39 405 Gene3D G3DSA:3.40.50.10540 6 405 6.7E-83 T 28-03-2018 IPR023606 CoA-transferase family III domain CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 Pfam PF00270 DEAD/DEAH box helicase 203 362 4.1E-15 T 28-03-2018 IPR011545 DEAD/DEAH box helicase domain GO:0003676|GO:0005524 CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 SUPERFAMILY SSF52540 215 440 5.01E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 SUPERFAMILY SSF52540 503 601 5.01E-41 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 Pfam PF00271 Helicase conserved C-terminal domain 522 589 2.5E-5 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 Gene3D G3DSA:3.40.50.300 196 361 2.3E-27 T 28-03-2018 CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 Hamap MF_00983 Probable primosomal protein N' [priA]. 6 732 26.192 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 SMART SM00490 492 589 1.1E-8 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 TIGRFAM TIGR00595 priA: primosomal protein N' 221 730 2.3E-215 T 28-03-2018 IPR005259 Primosomal protein N' GO:0003677|GO:0004003|GO:0006260|GO:0032508 CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 SMART SM00487 195 391 6.5E-19 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS24090 000956c143597f40214540f1a2f77dd3 732 Gene3D G3DSA:3.40.50.300 397 621 1.3E-22 T 28-03-2018 CI104_RS24915 0e40d4f0b63754ff6e8c5706f59e9452 376 SUPERFAMILY SSF53756 2 371 2.66E-142 T 28-03-2018 CI104_RS24915 0e40d4f0b63754ff6e8c5706f59e9452 376 Pfam PF02350 UDP-N-acetylglucosamine 2-epimerase 22 370 1.1E-129 T 28-03-2018 IPR003331 UDP-N-acetylglucosamine 2-epimerase domain Reactome: R-HSA-4085001 CI104_RS24915 0e40d4f0b63754ff6e8c5706f59e9452 376 Hamap MF_02028 UDP-N-acetylglucosamine 2-epimerase [wecB]. 16 374 66.455 T 28-03-2018 IPR032892 UDP-N-acetylglucosamine 2-epimerase WecB GO:0008761|GO:0009246 KEGG: 00520+5.1.3.14|MetaCyc: PWY-7335|MetaCyc: PWY-7815|MetaCyc: PWY-7816|MetaCyc: PWY-7819 CI104_RS24915 0e40d4f0b63754ff6e8c5706f59e9452 376 Gene3D G3DSA:3.40.50.2000 211 356 4.5E-39 T 28-03-2018 CI104_RS24915 0e40d4f0b63754ff6e8c5706f59e9452 376 TIGRFAM TIGR00236 wecB: UDP-N-acetylglucosamine 2-epimerase 1 372 6.4E-181 T 28-03-2018 IPR029767 UDP-N-acetylglucosamine 2-epimerase WecB-like GO:0008761 CI104_RS24915 0e40d4f0b63754ff6e8c5706f59e9452 376 Gene3D G3DSA:3.40.50.2000 1 210 2.5E-79 T 28-03-2018 CI104_RS19075 2863abd6e83bc3eb25875700cb99111d 96 Gene3D G3DSA:3.10.20.280 1 88 6.7E-34 T 28-03-2018 IPR005346 RnfH protein CI104_RS19075 2863abd6e83bc3eb25875700cb99111d 96 Hamap MF_00460 Protein RnfH [rnfH]. 5 95 25.828 T 28-03-2018 IPR005346 RnfH protein CI104_RS19075 2863abd6e83bc3eb25875700cb99111d 96 Pfam PF03658 RnfH family Ubiquitin 5 87 7.6E-35 T 28-03-2018 IPR005346 RnfH protein CI104_RS19075 2863abd6e83bc3eb25875700cb99111d 96 SUPERFAMILY SSF54285 4 79 1.31E-26 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 52 5.4E-20 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 Gene3D G3DSA:1.10.260.40 6 61 2.7E-14 T 28-03-2018 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 SMART SM00354 5 75 1.6E-29 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 SUPERFAMILY SSF53822 63 326 8.05E-55 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 ProSitePatterns PS00356 LacI-type HTH domain signature. 8 26 - T 28-03-2018 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 Gene3D G3DSA:3.40.50.2300 62 171 7.7E-20 T 28-03-2018 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 Gene3D G3DSA:3.40.50.2300 172 332 4.2E-33 T 28-03-2018 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 SUPERFAMILY SSF47413 4 63 6.19E-14 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS21960 3aa539347e95cd16ffec7f943c191cc5 332 Pfam PF13377 Periplasmic binding protein-like domain 178 328 5.2E-23 T 28-03-2018 CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 Gene3D G3DSA:3.40.710.10 261 606 3.4E-61 T 28-03-2018 CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 SUPERFAMILY SSF56601 208 635 6.1E-90 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 Pfam PF06832 Penicillin-Binding Protein C-terminus Family 685 767 7.8E-15 T 28-03-2018 IPR009647 Penicillin-binding, C-terminal CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 Pfam PF00912 Transglycosylase 62 226 1.4E-49 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 Pfam PF00905 Penicillin binding protein transpeptidase domain 313 422 2.3E-7 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 TIGRFAM TIGR02073 PBP_1c: penicillin-binding protein 1C 38 768 7.1E-261 T 28-03-2018 IPR011815 Penicillin-binding protein 1C GO:0008955|GO:0009252 CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 Gene3D G3DSA:1.10.3810.10 42 243 3.1E-58 T 28-03-2018 IPR001264 Glycosyl transferase, family 51 CI104_RS18565 3a763c21ee9430dba7972388d69643ee 770 SUPERFAMILY SSF53955 39 258 2.31E-65 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS23930 4c7b8f38e9eb76a142748c8e2d5bf186 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 312 2.5E-36 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS23930 4c7b8f38e9eb76a142748c8e2d5bf186 330 Gene3D G3DSA:1.10.3470.10 34 323 5.5E-23 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS10030 bcf89298a00fb088a7d14ce2797038e3 435 Gene3D G3DSA:1.20.1250.20 226 435 4.1E-28 T 28-03-2018 CI104_RS10030 bcf89298a00fb088a7d14ce2797038e3 435 SUPERFAMILY SSF103473 11 433 1.05E-91 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS10030 bcf89298a00fb088a7d14ce2797038e3 435 PIRSF PIRSF002808 1 435 2.3E-36 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS10030 bcf89298a00fb088a7d14ce2797038e3 435 Gene3D G3DSA:1.20.1250.20 10 211 1.5E-45 T 28-03-2018 CI104_RS10030 bcf89298a00fb088a7d14ce2797038e3 435 Pfam PF07690 Major Facilitator Superfamily 25 392 3.9E-61 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 Gene3D G3DSA:3.30.450.40 91 268 5.2E-56 T 28-03-2018 IPR029016 GAF domain-like CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 SUPERFAMILY SSF55781 89 267 3.04E-51 T 28-03-2018 IPR029016 GAF domain-like CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 Pfam PF01614 Bacterial transcriptional regulator 139 264 7.5E-35 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 Gene3D G3DSA:1.10.10.10 16 90 2.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 TIGRFAM TIGR02431 pcaR_pcaU: beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family 20 265 7.0E-96 T 28-03-2018 IPR012794 Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR GO:0003677|GO:0045893|GO:0046278 CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 Pfam PF09339 IclR helix-turn-helix domain 25 73 3.1E-13 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 SUPERFAMILY SSF46785 24 95 1.73E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13810 7157a3fb0529b3d17034a1a11045af7e 268 SMART SM00346 23 112 2.6E-25 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 ProSitePatterns PS01015 Ribosomal protein L19 signature. 86 101 - T 28-03-2018 IPR018257 Ribosomal protein L19, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 PIRSF PIRSF002191 1 115 4.7E-51 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 Pfam PF01245 Ribosomal protein L19 3 113 4.3E-50 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 Hamap MF_00402 50S ribosomal protein L19 [rplS]. 2 114 30.655 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 SUPERFAMILY SSF50104 2 114 3.11E-48 T 28-03-2018 IPR008991 Translation protein SH3-like domain CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 PRINTS PR00061 Ribosomal protein L19 signature 34 63 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 PRINTS PR00061 Ribosomal protein L19 signature 4 33 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 PRINTS PR00061 Ribosomal protein L19 signature 88 113 9.8E-43 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19015 ca1da38c8d7746ddbe3ffd810abf6785 115 TIGRFAM TIGR01024 rplS_bact: ribosomal protein bL19 3 113 1.9E-53 T 28-03-2018 IPR001857 Ribosomal protein L19 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 Hamap MF_00453 Phosphoenolpyruvate carboxykinase (ATP) [pckA]. 15 537 55.96 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 TIGRFAM TIGR00224 pckA: phosphoenolpyruvate carboxykinase (ATP) 7 539 3.3E-292 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 ProSitePatterns PS00532 Phosphoenolpyruvate carboxykinase (ATP) signature. 264 279 - T 28-03-2018 IPR015994 Phosphoenolpyruvate carboxykinase (ATP), conserved site GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 PIRSF PIRSF006294 2 539 1.2E-232 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 Gene3D G3DSA:3.40.449.10 22 226 3.2E-78 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 SUPERFAMILY SSF53795 228 539 1.51E-130 T 28-03-2018 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 SUPERFAMILY SSF68923 8 226 2.44E-91 T 28-03-2018 IPR008210 Phosphoenolpyruvate carboxykinase, N-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 Pfam PF01293 Phosphoenolpyruvate carboxykinase 21 490 3.2E-212 T 28-03-2018 IPR001272 Phosphoenolpyruvate carboxykinase, ATP-utilising GO:0004612|GO:0005524|GO:0006094 KEGG: 00010+4.1.1.49|KEGG: 00020+4.1.1.49|KEGG: 00620+4.1.1.49|KEGG: 00710+4.1.1.49|MetaCyc: PWY-561|MetaCyc: PWY-7117 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 Gene3D G3DSA:3.90.228.20 227 306 6.0E-29 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CI104_RS01730 44724fd4d1e95e93b7e28f344ee7b4bf 539 Gene3D G3DSA:3.90.228.20 307 537 4.2E-93 T 28-03-2018 IPR013035 Phosphoenolpyruvate carboxykinase, C-terminal GO:0004611|GO:0006094|GO:0017076 Reactome: R-HSA-70263 CI104_RS23740 64ba03c54a11fae40912e70c9cf33506 377 Gene3D G3DSA:3.20.20.70 16 370 1.3E-44 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS23740 64ba03c54a11fae40912e70c9cf33506 377 TIGRFAM TIGR02351 thiH: thiazole biosynthesis protein ThiH 3 368 2.0E-161 T 28-03-2018 IPR012726 Thiazole biosynthesis ThiH GO:0005506|GO:0009228|GO:0051539 KEGG: 00730+4.1.99.19|MetaCyc: PWY-6892 CI104_RS23740 64ba03c54a11fae40912e70c9cf33506 377 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 258 360 2.9E-20 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS23740 64ba03c54a11fae40912e70c9cf33506 377 SMART SM00876 258 361 7.5E-29 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS23740 64ba03c54a11fae40912e70c9cf33506 377 Pfam PF04055 Radical SAM superfamily 82 227 7.6E-9 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS23740 64ba03c54a11fae40912e70c9cf33506 377 SUPERFAMILY SSF102114 37 362 6.41E-53 T 28-03-2018 CI104_RS19840 8ad3cd62d65e8b597cb1dbd8f918ecf1 116 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 113 5.8E-30 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS19840 8ad3cd62d65e8b597cb1dbd8f918ecf1 116 PIRSF PIRSF004761 1 116 1.6E-36 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS19840 8ad3cd62d65e8b597cb1dbd8f918ecf1 116 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 114 22.995 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS19840 8ad3cd62d65e8b597cb1dbd8f918ecf1 116 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CI104_RS19840 8ad3cd62d65e8b597cb1dbd8f918ecf1 116 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 116 3.1E-42 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS16195 499bf3b1b812a2725b273664386d119a 554 ProDom PD025428 SUBUNIT GLYCEROL DEHYDRATASE LARGE LYASE DHAB ALPHA DIOL B12-DEPENDENT METABOLISM 8 549 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CI104_RS16195 499bf3b1b812a2725b273664386d119a 554 Pfam PF02286 Dehydratase large subunit 1 551 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CI104_RS16195 499bf3b1b812a2725b273664386d119a 554 PIRSF PIRSF018507 1 554 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CI104_RS16195 499bf3b1b812a2725b273664386d119a 554 Gene3D G3DSA:3.20.20.350 2 553 0.0 T 28-03-2018 IPR003206 Diol/glycerol dehydratase, large subunit GO:0008152|GO:0016836|GO:0031419|GO:0050215 CI104_RS16195 499bf3b1b812a2725b273664386d119a 554 SUPERFAMILY SSF51703 1 553 4.71E-292 T 28-03-2018 IPR016176 Cobalamin (vitamin B12)-dependent enzyme, catalytic GO:0003824|GO:0008152|GO:0031419 Reactome: R-HSA-196741|Reactome: R-HSA-3359475|Reactome: R-HSA-3359478|Reactome: R-HSA-71032 CI104_RS02570 7e83a2f8447b1a959eb026f7a47d4917 130 Hamap MF_00532_B 30S ribosomal protein S9 [rpsI]. 1 130 34.138 T 28-03-2018 IPR023035 Ribosomal protein S9, bacterial/plastid CI104_RS02570 7e83a2f8447b1a959eb026f7a47d4917 130 Pfam PF00380 Ribosomal protein S9/S16 10 130 1.3E-46 T 28-03-2018 IPR000754 Ribosomal protein S9 GO:0003735|GO:0005840|GO:0006412 CI104_RS02570 7e83a2f8447b1a959eb026f7a47d4917 130 SUPERFAMILY SSF54211 5 130 1.59E-49 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS02570 7e83a2f8447b1a959eb026f7a47d4917 130 Gene3D G3DSA:3.30.230.10 3 130 1.2E-52 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS02570 7e83a2f8447b1a959eb026f7a47d4917 130 ProSitePatterns PS00360 Ribosomal protein S9 signature. 69 87 - T 28-03-2018 IPR020574 Ribosomal protein S9, conserved site GO:0003735|GO:0005840|GO:0006412 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 SUPERFAMILY SSF50621 227 355 1.12E-44 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 Pfam PF00842 Alanine racemase, C-terminal domain 232 354 1.4E-40 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 Pfam PF01168 Alanine racemase, N-terminal domain 9 217 6.6E-67 T 28-03-2018 IPR001608 Alanine racemase, N-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 TIGRFAM TIGR00492 alr: alanine racemase 4 356 4.6E-136 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 Gene3D G3DSA:2.40.37.10 202 356 3.0E-61 T 28-03-2018 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal GO:0003824 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 SMART SM01005 232 356 1.8E-61 T 28-03-2018 IPR011079 Alanine racemase, C-terminal KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 Gene3D G3DSA:3.20.20.10 7 201 1.1E-39 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS14625 d660a864fbcf89894653d28079679b95 356 Hamap MF_01201 Alanine racemase. 2 356 33.671 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 190 217 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 265 280 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 338 351 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 27 43 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 155 166 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 286 303 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 121 133 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 248 263 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 PRINTS PR00992 Alanine racemase signature 61 79 1.8E-75 T 28-03-2018 IPR000821 Alanine racemase GO:0006522|GO:0008784 KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS14625 d660a864fbcf89894653d28079679b95 356 SUPERFAMILY SSF51419 9 233 2.94E-65 T 28-03-2018 IPR029066 PLP-binding barrel CI104_RS14625 d660a864fbcf89894653d28079679b95 356 ProSitePatterns PS00395 Alanine racemase pyridoxal-phosphate attachment site. 32 42 - T 28-03-2018 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site KEGG: 00473+5.1.1.1|MetaCyc: PWY-7383 CI104_RS02070 d44845a02f8ee59d1e9b327b0534f8f6 110 ProSitePatterns PS00464 Ribosomal protein L22 signature. 83 107 - T 28-03-2018 IPR018260 Ribosomal protein L22/L17, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02070 d44845a02f8ee59d1e9b327b0534f8f6 110 Pfam PF00237 Ribosomal protein L22p/L17e 5 107 7.6E-38 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CI104_RS02070 d44845a02f8ee59d1e9b327b0534f8f6 110 SUPERFAMILY SSF54843 1 109 4.06E-43 T 28-03-2018 IPR001063 Ribosomal protein L22/L17 GO:0003735|GO:0005840|GO:0006412 CI104_RS02070 d44845a02f8ee59d1e9b327b0534f8f6 110 TIGRFAM TIGR01044 rplV_bact: ribosomal protein uL22 5 107 4.1E-51 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02070 d44845a02f8ee59d1e9b327b0534f8f6 110 Gene3D G3DSA:3.90.470.10 1 110 3.3E-43 T 28-03-2018 CI104_RS02070 d44845a02f8ee59d1e9b327b0534f8f6 110 Hamap MF_01331_B 50S ribosomal protein L22 [rplV]. 1 110 29.067 T 28-03-2018 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS00830 ee5348f720e009e2daf918d56ddde5e0 330 Pfam PF13407 Periplasmic binding protein domain 38 285 8.2E-62 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS00830 ee5348f720e009e2daf918d56ddde5e0 330 Gene3D G3DSA:3.40.50.2300 131 329 3.6E-36 T 28-03-2018 CI104_RS00830 ee5348f720e009e2daf918d56ddde5e0 330 SUPERFAMILY SSF53822 24 318 1.4E-71 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS00830 ee5348f720e009e2daf918d56ddde5e0 330 Gene3D G3DSA:3.40.50.2300 26 130 2.1E-20 T 28-03-2018 CI104_RS00830 ee5348f720e009e2daf918d56ddde5e0 330 TIGRFAM TIGR02634 xylF: D-xylose ABC transporter, D-xylose-binding protein 28 330 1.3E-166 T 28-03-2018 IPR013456 D-xylose ABC transporter, substrate-binding protein GO:0015753|GO:0048029 CI104_RS06290 3fef5d441842f12f9b694422a44e5a5d 171 Gene3D G3DSA:1.10.3760.10 50 167 4.6E-38 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CI104_RS06290 3fef5d441842f12f9b694422a44e5a5d 171 Pfam PF04608 Phosphatidylglycerophosphatase A 22 162 1.3E-51 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CI104_RS06290 3fef5d441842f12f9b694422a44e5a5d 171 SUPERFAMILY SSF101307 16 162 2.09E-47 T 28-03-2018 IPR007686 YutG/PgpA domain GO:0006629|GO:0008962 CI104_RS06290 3fef5d441842f12f9b694422a44e5a5d 171 PIRSF PIRSF006162 11 169 2.4E-57 T 28-03-2018 IPR026037 Phosphatidylglycerophosphatase A KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CI104_RS05645 c9957607bb36b3273b75648a1849988c 253 Gene3D G3DSA:3.40.1730.10 8 252 8.2E-39 T 28-03-2018 CI104_RS05645 c9957607bb36b3273b75648a1849988c 253 Pfam PF09867 Uncharacterized protein conserved in bacteria (DUF2094) 77 155 3.1E-9 T 28-03-2018 IPR017748 Type VI secretion system-associated, BMAA0400 CI104_RS22830 558bfda922d64f8afba6acac48f3b2de 83 SUPERFAMILY SSF47336 4 81 7.07E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS22830 558bfda922d64f8afba6acac48f3b2de 83 Gene3D G3DSA:1.10.1200.10 2 83 6.0E-14 T 28-03-2018 CI104_RS22830 558bfda922d64f8afba6acac48f3b2de 83 Pfam PF00550 Phosphopantetheine attachment site 10 75 3.9E-12 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS21115 753d7566b8e4f938f96f019b61c43308 210 Gene3D G3DSA:3.40.50.10420 4 202 1.0E-59 T 28-03-2018 CI104_RS21115 753d7566b8e4f938f96f019b61c43308 210 SUPERFAMILY SSF100950 10 199 3.91E-57 T 28-03-2018 CI104_RS21115 753d7566b8e4f938f96f019b61c43308 210 PIRSF PIRSF006806 8 195 3.3E-34 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CI104_RS21115 753d7566b8e4f938f96f019b61c43308 210 Pfam PF01812 5-formyltetrahydrofolate cyclo-ligase family 11 192 6.9E-44 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CI104_RS21115 753d7566b8e4f938f96f019b61c43308 210 TIGRFAM TIGR02727 MTHFS_bact: 5-formyltetrahydrofolate cyclo-ligase 11 192 9.5E-53 T 28-03-2018 IPR002698 5-formyltetrahydrofolate cyclo-ligase CI104_RS19640 7847e5e9fd33577f80808b35075ab7a1 518 SUPERFAMILY SSF55931 4 514 9.81E-204 T 28-03-2018 CI104_RS19640 7847e5e9fd33577f80808b35075ab7a1 518 Pfam PF04262 Glutamate-cysteine ligase 9 380 4.3E-172 T 28-03-2018 IPR007370 Glutamate--cysteine ligase GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CI104_RS19640 7847e5e9fd33577f80808b35075ab7a1 518 TIGRFAM TIGR01434 glu_cys_ligase: glutamate--cysteine ligase 6 516 1.1E-279 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CI104_RS19640 7847e5e9fd33577f80808b35075ab7a1 518 Hamap MF_00578 Glutamate--cysteine ligase [gshA]. 1 518 228.176 T 28-03-2018 IPR006334 Glutamate--cysteine ligase, monofunctional GO:0004357|GO:0006750 KEGG: 00270+6.3.2.2|KEGG: 00480+6.3.2.2|MetaCyc: PWY-6840|MetaCyc: PWY-7255 CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 SUPERFAMILY SSF52540 24 102 1.88E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 SUPERFAMILY SSF52540 147 182 1.88E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 SUPERFAMILY SSF52540 358 497 1.88E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 Gene3D G3DSA:1.20.1580.10 119 415 3.7E-58 T 28-03-2018 CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 SUPERFAMILY SSF52540 623 853 1.57E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 SUPERFAMILY SSF52540 544 586 1.57E-42 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 Gene3D G3DSA:3.40.50.300 20 118 0.021 T 28-03-2018 CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 Gene3D G3DSA:3.40.50.300 538 881 1.0E-48 T 28-03-2018 CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 Pfam PF00005 ABC transporter 548 799 4.6E-7 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 ProSitePatterns PS00211 ABC transporters family signature. 415 429 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS26365 11bbeb2636aaed9d9a5c62bec7d0058f 883 ProSitePatterns PS00211 ABC transporters family signature. 769 783 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS10120 3061ba2fde0389af5c132c0c90ffbac7 231 SUPERFAMILY SSF52540 1 221 1.02E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10120 3061ba2fde0389af5c132c0c90ffbac7 231 Pfam PF00005 ABC transporter 26 171 5.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS10120 3061ba2fde0389af5c132c0c90ffbac7 231 SMART SM00382 35 219 2.2E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS10120 3061ba2fde0389af5c132c0c90ffbac7 231 ProSitePatterns PS00211 ABC transporters family signature. 144 158 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS10120 3061ba2fde0389af5c132c0c90ffbac7 231 Gene3D G3DSA:3.40.50.300 7 231 2.7E-67 T 28-03-2018 CI104_RS21570 9c037c452e63bcb08aedd683b5e657a8 85 Pfam PF11823 Protein of unknown function (DUF3343) 3 58 1.4E-12 T 28-03-2018 IPR021778 Domain of unknown function DUF3343 CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 Gene3D G3DSA:1.20.120.530 155 301 6.2E-15 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 SMART SM00895 159 287 1.7E-9 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 SUPERFAMILY SSF46785 3 66 5.0E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 Pfam PF07729 FCD domain 159 286 7.7E-9 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 42 58 2.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 28 42 2.2E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 Gene3D G3DSA:1.10.10.10 84 154 2.3E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 SUPERFAMILY SSF48008 157 294 9.42E-13 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 60 8.0E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21340 dd0d1e5a1562549ef6ca261011b0b906 301 Gene3D G3DSA:1.10.10.10 1 71 1.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 TIGRFAM TIGR01584 citF: citrate lyase, alpha subunit 37 506 5.2E-223 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 Pfam PF04223 Citrate lyase, alpha subunit (CitF) 40 504 3.4E-227 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 SUPERFAMILY SSF100950 239 504 4.93E-59 T 28-03-2018 CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 Gene3D G3DSA:3.40.1080.10 1 235 1.3E-51 T 28-03-2018 CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 PIRSF PIRSF009451 5 506 1.4E-236 T 28-03-2018 IPR006472 Citrate lyase, alpha subunit GO:0005737|GO:0006084|GO:0008814|GO:0009346 MetaCyc: PWY-6038 CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 Gene3D G3DSA:3.40.1080.10 237 480 5.3E-38 T 28-03-2018 CI104_RS19395 fa300b862afbe6d9cf94557511a312f8 506 SUPERFAMILY SSF100950 9 234 2.99E-72 T 28-03-2018 CI104_RS20505 4858dfacd1bcc6635ffd2f547c375639 177 Gene3D G3DSA:2.60.40.1090 26 177 7.6E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20505 4858dfacd1bcc6635ffd2f547c375639 177 SUPERFAMILY SSF49401 27 177 4.52E-22 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20505 4858dfacd1bcc6635ffd2f547c375639 177 Pfam PF00419 Fimbrial protein 29 177 8.1E-11 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS21715 7461da5600cfb58f00ba972d2c3a287f 96 Pfam PF03992 Antibiotic biosynthesis monooxygenase 1 76 4.6E-16 T 28-03-2018 IPR007138 Antibiotic biosynthesis monooxygenase domain CI104_RS21715 7461da5600cfb58f00ba972d2c3a287f 96 Hamap MF_02051 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase [lsrG]. 1 96 36.296 T 28-03-2018 IPR033672 (4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase GO:0016853 CI104_RS21715 7461da5600cfb58f00ba972d2c3a287f 96 SUPERFAMILY SSF54909 1 94 1.49E-22 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS21715 7461da5600cfb58f00ba972d2c3a287f 96 Gene3D G3DSA:3.30.70.100 1 92 1.9E-18 T 28-03-2018 CI104_RS16940 51489552fb99fc91d7255c80d1f389fc 416 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 4 412 7.2E-154 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CI104_RS16940 51489552fb99fc91d7255c80d1f389fc 416 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 8 81 1.0E-21 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CI104_RS16940 51489552fb99fc91d7255c80d1f389fc 416 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 201 412 3.6E-66 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 Pfam PF07729 FCD domain 80 200 2.8E-8 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 SUPERFAMILY SSF46785 3 73 1.16E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 SUPERFAMILY SSF48008 80 207 3.14E-7 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 Gene3D G3DSA:1.20.120.530 66 216 6.7E-13 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 SMART SM00345 11 69 4.8E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 Pfam PF00392 Bacterial regulatory proteins, gntR family 9 69 1.3E-14 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS21445 766c3af2d4bd1848d3b49ffb8d8a6821 216 Gene3D G3DSA:1.10.10.10 1 65 5.2E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06605 a2cde9e2bb76d81cb8613f8193a3e8ee 171 Pfam PF07445 Primosomal replication protein priC 4 169 6.3E-45 T 28-03-2018 IPR010890 Primosomal replication PriB/PriC CI104_RS01525 0a2bcaf824a36c9ece63caf442c1b9fa 175 Pfam PF01202 Shikimate kinase 17 170 6.8E-12 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS01525 0a2bcaf824a36c9ece63caf442c1b9fa 175 Gene3D G3DSA:3.40.50.300 7 175 4.2E-28 T 28-03-2018 CI104_RS01525 0a2bcaf824a36c9ece63caf442c1b9fa 175 SUPERFAMILY SSF52540 4 172 3.15E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01525 0a2bcaf824a36c9ece63caf442c1b9fa 175 TIGRFAM TIGR01313 therm_gnt_kin: carbohydrate kinase, thermoresistant glucokinase family 11 172 3.8E-72 T 28-03-2018 IPR006001 Carbohydrate kinase, thermoresistant glucokinase GO:0005975|GO:0016301 KEGG: 00030+2.7.1.12|MetaCyc: PWY-5530 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 Pfam PF00171 Aldehyde dehydrogenase family 13 470 1.7E-162 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 SUPERFAMILY SSF53720 3 473 1.7E-155 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 Gene3D G3DSA:3.40.309.10 260 456 9.2E-65 T 28-03-2018 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 Hamap MF_01275 Gamma-aminobutyraldehyde dehydrogenase [prr]. 1 474 82.017 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 TIGRFAM TIGR03374 ABALDH: 1-pyrroline dehydrogenase 2 473 0.0 T 28-03-2018 IPR017749 1-pyrroline dehydrogenase GO:0009447|GO:0019145|GO:0051287|GO:0055114 KEGG: 00330+1.2.1.19|KEGG: 00410+1.2.1.19|MetaCyc: PWY-2|MetaCyc: PWY-3 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 Gene3D G3DSA:3.40.605.10 1 259 2.6E-95 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS13390 64f3e95fa16793c54d5302f7fc684967 474 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 245 252 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS11170 58a37d314a25bf5a9ef1c73db6065f70 109 ProDom PD020518 CAPSID HEAD PROPHAGE DECORATION SUBUNIT SMALL 3D-STRUCTURE MAJOR GIFSY-1 STRUCTURAL 24 109 6.0E-24 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS11170 58a37d314a25bf5a9ef1c73db6065f70 109 Pfam PF02924 Bacteriophage lambda head decoration protein D 5 104 2.2E-10 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS11170 58a37d314a25bf5a9ef1c73db6065f70 109 Gene3D G3DSA:2.40.300.10 15 108 1.7E-15 T 28-03-2018 CI104_RS11170 58a37d314a25bf5a9ef1c73db6065f70 109 SUPERFAMILY SSF51274 15 108 3.01E-38 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 Gene3D G3DSA:1.10.10.60 143 194 0.11 T 28-03-2018 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 228 244 2.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 213 228 2.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 SUPERFAMILY SSF46689 197 247 1.02E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 Gene3D G3DSA:3.90.1240.10 232 253 0.0021 T 28-03-2018 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 198 240 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 Pfam PF12833 Helix-turn-helix domain 169 244 7.3E-14 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 Gene3D G3DSA:1.10.10.60 195 231 2.9E-11 T 28-03-2018 CI104_RS23005 747f05beec6820b43a5056fa2ffe18e4 253 SMART SM00342 162 244 1.6E-29 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS04080 05749f3a92d9038519682dc45d6513cb 213 Gene3D G3DSA:3.40.225.10 1 213 2.2E-56 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS04080 05749f3a92d9038519682dc45d6513cb 213 SUPERFAMILY SSF53639 1 211 1.84E-58 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS04080 05749f3a92d9038519682dc45d6513cb 213 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 9 182 6.5E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS04080 05749f3a92d9038519682dc45d6513cb 213 Hamap MF_00987 L-fuculose phosphate aldolase [fucA]. 1 213 57.82 T 28-03-2018 IPR004782 L-fucose phosphate aldolase GO:0006004|GO:0008270|GO:0008738 KEGG: 00051+4.1.2.17|MetaCyc: PWY-5197 CI104_RS04080 05749f3a92d9038519682dc45d6513cb 213 SMART SM01007 8 182 1.2E-58 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS22105 d7d2df82053b8cea0448b80ab8237346 169 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 27 155 2.9E-23 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 Gene3D G3DSA:1.10.150.130 3 100 1.5E-20 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 Gene3D G3DSA:1.10.443.10 111 292 1.5E-50 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 298 59.07 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 Hamap MF_01807 Tyrosine recombinase XerD [xerD]. 4 298 65.579 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 8 90 4.0E-24 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 Pfam PF00589 Phage integrase family 113 283 2.6E-56 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 SUPERFAMILY SSF47823 4 100 5.69E-35 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 SUPERFAMILY SSF56349 106 296 1.85E-59 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS21015 fae7bb304aa29a3779a66610d2bf3e33 298 TIGRFAM TIGR02225 recomb_XerD: tyrosine recombinase XerD 9 298 3.0E-119 T 28-03-2018 IPR011932 Tyrosine recombinase XerD GO:0006310|GO:0009009 CI104_RS02405 a4a2eef40cf84186da9382676dff01f2 329 Pfam PF02653 Branched-chain amino acid transport system / permease component 53 318 4.6E-44 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS02405 a4a2eef40cf84186da9382676dff01f2 329 Gene3D G3DSA:1.10.3470.10 27 325 2.8E-36 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS03750 dc591d93ee119cddcc38c46ca6a7613f 273 Hamap MF_01006 Undecaprenyl-diphosphatase [uppP]. 5 272 18.763 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CI104_RS03750 dc591d93ee119cddcc38c46ca6a7613f 273 Pfam PF02673 Bacitracin resistance protein BacA 10 266 7.1E-89 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CI104_RS03750 dc591d93ee119cddcc38c46ca6a7613f 273 TIGRFAM TIGR00753 undec_PP_bacA: undecaprenyl-diphosphatase UppP 10 265 1.1E-108 T 28-03-2018 IPR003824 Undecaprenyl-diphosphatase UppP GO:0016020|GO:0016311|GO:0050380 KEGG: 00550+3.6.1.27|MetaCyc: PWY-5785 CI104_RS03485 97ebf84bf4d8124a074a41968ea877e9 326 Pfam PF14072 DNA-sulfur modification-associated 7 213 3.5E-22 T 28-03-2018 IPR017642 DNA sulphur modification protein DndB CI104_RS03485 97ebf84bf4d8124a074a41968ea877e9 326 TIGRFAM TIGR03187 DGQHR: DGQHR domain 7 259 1.1E-40 T 28-03-2018 IPR017601 DGQHR-containing domain CI104_RS24080 83030efe237ae701b96d5bb9feff2b57 226 Gene3D G3DSA:2.40.160.40 21 226 1.3E-20 T 28-03-2018 CI104_RS24080 83030efe237ae701b96d5bb9feff2b57 226 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 226 8.5E-61 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin CI104_RS09995 8a642df1575d711a41172a4aa01e4d4c 445 Pfam PF13440 Polysaccharide biosynthesis protein 43 346 1.9E-9 T 28-03-2018 CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 Hamap MF_01077 Ribosome maturation factor RimP [rimP]. 10 154 24.447 T 28-03-2018 IPR003728 Ribosome maturation factor RimP GO:0042274 CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 Gene3D G3DSA:3.30.300.70 3 83 1.2E-27 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 Pfam PF02576 RimP N-terminal domain 16 86 1.8E-28 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 SUPERFAMILY SSF74942 87 154 2.22E-16 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 SUPERFAMILY SSF75420 6 86 2.62E-25 T 28-03-2018 IPR028989 Ribosome maturation factor RimP, N-terminal CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 Gene3D G3DSA:2.30.30.180 91 151 1.2E-17 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CI104_RS02885 752fb596a27408bcfa2ed8617011e2e9 154 Pfam PF17384 RimP C-terminal SH3 domain 89 154 2.9E-22 T 28-03-2018 IPR028998 Ribosome maturation factor RimP, C-terminal CI104_RS28045 4ede64e4de84cc1a71e618245769a034 401 Gene3D G3DSA:3.40.50.300 108 399 3.8E-32 T 28-03-2018 CI104_RS28045 4ede64e4de84cc1a71e618245769a034 401 Pfam PF13614 AAA domain 110 278 3.1E-20 T 28-03-2018 IPR025669 AAA domain CI104_RS28045 4ede64e4de84cc1a71e618245769a034 401 SUPERFAMILY SSF52540 108 395 1.23E-25 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 Gene3D G3DSA:2.60.40.10 398 511 7.2E-45 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 Pfam PF04349 Periplasmic glucan biosynthesis protein, MdoG 23 507 3.2E-201 T 28-03-2018 IPR007444 Glucan biosynthesis, periplasmic, MdoG C-terminal GO:0016051|GO:0042597 CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 Gene3D G3DSA:2.70.98.10 23 392 3.9E-169 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 SUPERFAMILY SSF74650 23 394 4.39E-166 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 Hamap MF_01069 Glucans biosynthesis protein G [mdoG]. 6 509 63.532 T 28-03-2018 IPR023704 Glucan biosynthesis protein G CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 SUPERFAMILY SSF81296 397 510 2.66E-34 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS10295 30b3b2a0bdbd2356f92048d7157c2573 511 PIRSF PIRSF006281 1 511 3.8E-242 T 28-03-2018 IPR014438 Glucan biosynthesis, periplasmic, MdoG/D CI104_RS24350 5b3f6af4c9801168a989a02638c333a4 280 SUPERFAMILY SSF51569 3 279 4.25E-85 T 28-03-2018 CI104_RS24350 5b3f6af4c9801168a989a02638c333a4 280 Pfam PF01116 Fructose-bisphosphate aldolase class-II 6 279 3.7E-87 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS24350 5b3f6af4c9801168a989a02638c333a4 280 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 132 143 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS24350 5b3f6af4c9801168a989a02638c333a4 280 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 279 2.6E-78 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS24350 5b3f6af4c9801168a989a02638c333a4 280 Gene3D G3DSA:3.20.20.70 1 280 9.5E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24350 5b3f6af4c9801168a989a02638c333a4 280 PIRSF PIRSF001359 1 280 2.0E-85 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS25340 9ed967dd772dd0734211c276841579d3 316 Pfam PF09676 Type IV conjugative transfer system lipoprotein (TraV) 223 271 2.3E-9 T 28-03-2018 IPR014118 Type IV conjugative transfer system protein TraV CI104_RS05565 b7cf9cf78752a0b34d051f88c36fcaac 303 Gene3D G3DSA:2.60.200.20 40 126 2.7E-4 T 28-03-2018 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 Gene3D G3DSA:3.40.50.300 1 289 3.0E-41 T 28-03-2018 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 SUPERFAMILY SSF52540 4 286 1.46E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 ProSitePatterns PS00567 Phosphoribulokinase signature. 164 177 - T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 Pfam PF00485 Phosphoribulokinase / Uridine kinase family 7 214 2.9E-77 T 28-03-2018 IPR006083 Phosphoribulokinase/uridine kinase GO:0005524|GO:0008152|GO:0016301 Reactome: R-HSA-73614 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 PRINTS PR00478 Phosphoribulokinase family signature 126 144 4.5E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 PRINTS PR00478 Phosphoribulokinase family signature 182 205 4.5E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 PRINTS PR00478 Phosphoribulokinase family signature 164 181 4.5E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS01925 a4d3b5bad9ae56c37b26b8439d3a106d 289 PRINTS PR00478 Phosphoribulokinase family signature 12 29 4.5E-29 T 28-03-2018 IPR006082 Phosphoribulokinase GO:0005524|GO:0005975|GO:0008974 KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS11640 7de2e66878b86f661073c058e67799bd 114 Gene3D G3DSA:3.40.1800.10 6 86 1.0E-7 T 28-03-2018 CI104_RS11640 7de2e66878b86f661073c058e67799bd 114 SMART SM00507 15 70 1.4E-5 T 28-03-2018 IPR003615 HNH nuclease CI104_RS11640 7de2e66878b86f661073c058e67799bd 114 Pfam PF01844 HNH endonuclease 27 75 9.7E-12 T 28-03-2018 IPR002711 HNH endonuclease GO:0003676|GO:0004519 CI104_RS00950 0e7fe6c83a0bebc2820d19333dc22967 563 Pfam PF08019 Domain of unknown function (DUF1705) 57 170 1.5E-16 T 28-03-2018 IPR012549 Phosphoethanolamine transferase, N-terminal GO:0016021 CI104_RS00950 0e7fe6c83a0bebc2820d19333dc22967 563 Pfam PF00884 Sulfatase 250 538 1.3E-47 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS00950 0e7fe6c83a0bebc2820d19333dc22967 563 Gene3D G3DSA:3.40.720.10 245 544 2.2E-20 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS00950 0e7fe6c83a0bebc2820d19333dc22967 563 SUPERFAMILY SSF53649 250 542 3.74E-21 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS11495 ddc71168a411aed51e9a79e036b1a173 148 Gene3D G3DSA:3.30.240.20 78 148 4.3E-16 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CI104_RS11495 ddc71168a411aed51e9a79e036b1a173 148 Pfam PF04239 Protein of unknown function (DUF421) 86 147 2.7E-12 T 28-03-2018 IPR007353 Protein of unknown function DUF421 CI104_RS15520 825332f59265be701a6f9fb259b39068 180 Pfam PF05229 Spore Coat Protein U domain 35 177 2.2E-23 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS15520 825332f59265be701a6f9fb259b39068 180 SMART SM00972 119 177 4.5E-10 T 28-03-2018 IPR007893 Spore coat protein U CI104_RS19080 433900bedf12d541589708c605bc6f3e 158 Pfam PF03364 Polyketide cyclase / dehydrase and lipid transport 23 148 3.7E-32 T 28-03-2018 IPR005031 Coenzyme Q-binding protein COQ10, START domain Reactome: R-HSA-611105 CI104_RS19080 433900bedf12d541589708c605bc6f3e 158 Gene3D G3DSA:3.30.530.20 14 157 9.6E-33 T 28-03-2018 IPR023393 START-like domain CI104_RS19080 433900bedf12d541589708c605bc6f3e 158 SUPERFAMILY SSF55961 14 155 1.53E-34 T 28-03-2018 CI104_RS06330 9eed8126974477eae063ad2a9c71e798 172 Gene3D G3DSA:3.30.70.20 60 98 2.7E-18 T 28-03-2018 CI104_RS06330 9eed8126974477eae063ad2a9c71e798 172 Pfam PF13247 4Fe-4S dicluster domain 41 134 8.2E-26 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS06330 9eed8126974477eae063ad2a9c71e798 172 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 79 90 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS06330 9eed8126974477eae063ad2a9c71e798 172 Gene3D G3DSA:3.30.70.20 1 59 2.9E-10 T 28-03-2018 CI104_RS06330 9eed8126974477eae063ad2a9c71e798 172 Gene3D G3DSA:3.30.70.20 99 172 2.2E-15 T 28-03-2018 CI104_RS06330 9eed8126974477eae063ad2a9c71e798 172 SUPERFAMILY SSF54862 3 172 3.03E-54 T 28-03-2018 CI104_RS11655 d0f9d17a7ca85bf6836cac4aea67bf08 459 Gene3D G3DSA:1.20.1250.20 12 219 6.1E-32 T 28-03-2018 CI104_RS11655 d0f9d17a7ca85bf6836cac4aea67bf08 459 Pfam PF00083 Sugar (and other) transporter 56 450 1.1E-32 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS11655 d0f9d17a7ca85bf6836cac4aea67bf08 459 Gene3D G3DSA:1.20.1250.20 250 450 5.4E-19 T 28-03-2018 CI104_RS11655 d0f9d17a7ca85bf6836cac4aea67bf08 459 SUPERFAMILY SSF103473 20 449 8.63E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS20630 3c3499fcb59494a146611f4a753c24b4 179 SUPERFAMILY SSF49401 32 179 1.84E-34 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20630 3c3499fcb59494a146611f4a753c24b4 179 Gene3D G3DSA:2.60.40.1090 30 179 8.0E-33 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20630 3c3499fcb59494a146611f4a753c24b4 179 Pfam PF00419 Fimbrial protein 34 179 4.6E-23 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 TIGRFAM TIGR00915 2A0602: RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family 3 1042 0.0 T 28-03-2018 IPR004764 Hydrophobe/amphiphile efflux-1 HAE1 GO:0005215|GO:0006810|GO:0016021 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82714 729 815 6.8E-20 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:3.30.70.1440 679 773 2.2E-21 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 562 579 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 394 418 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 366 387 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 447 470 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 38 56 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 472 495 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 10 34 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 339 362 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 PRINTS PR00702 Acriflavin resistance protein family signature 631 645 1.1E-91 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Pfam PF00873 AcrB/AcrD/AcrF family 3 1034 0.0 T 28-03-2018 IPR001036 Acriflavin resistance protein GO:0005215|GO:0006810|GO:0016020 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:3.30.2090.10 183 277 6.4E-19 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82693 277 333 1.74E-26 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82693 139 184 1.74E-26 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82693 41 134 1.18E-26 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82866 813 1037 3.14E-43 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:3.30.70.1430 40 142 1.0E-26 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82866 299 499 2.09E-51 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:3.30.70.1430 578 678 2.7E-15 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:1.20.1640.10 278 501 1.4E-51 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:1.20.1640.10 853 1038 2.9E-38 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82714 185 275 7.59E-22 T 28-03-2018 IPR027463 Multidrug efflux transporter AcrB TolC docking domain, DN/DC subdomains CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 SUPERFAMILY SSF82693 575 678 9.42E-22 T 28-03-2018 CI104_RS14535 f41115d8774a304807cba08ec9f5ce65 1051 Gene3D G3DSA:3.30.70.1320 774 852 1.1E-7 T 28-03-2018 CI104_RS14655 f95754d7f52328060d6990288bb13240 153 Pfam PF03692 Putative zinc- or iron-chelating domain 29 97 4.7E-8 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CI104_RS14655 f95754d7f52328060d6990288bb13240 153 PIRSF PIRSF006173 3 150 8.7E-68 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CI104_RS14655 f95754d7f52328060d6990288bb13240 153 Hamap MF_00676 UPF0260 protein YcgN [ycgN]. 7 150 42.328 T 28-03-2018 IPR008228 Uncharacterised conserved protein UCP006173 CI104_RS16540 8cb9188a31b61182bf70dacbd29902d6 162 SUPERFAMILY SSF51161 11 158 2.22E-32 T 28-03-2018 IPR011004 Trimeric LpxA-like CI104_RS16540 8cb9188a31b61182bf70dacbd29902d6 162 ProSitePatterns PS00101 Hexapeptide-repeat containing-transferases signature. 117 145 - T 28-03-2018 IPR018357 Hexapeptide transferase, conserved site GO:0016740 Reactome: R-HSA-446205 CI104_RS16540 8cb9188a31b61182bf70dacbd29902d6 162 Gene3D G3DSA:2.160.10.10 26 161 4.9E-25 T 28-03-2018 CI104_RS16540 8cb9188a31b61182bf70dacbd29902d6 162 Pfam PF00132 Bacterial transferase hexapeptide (six repeats) 109 141 3.0E-9 T 28-03-2018 IPR001451 Hexapeptide repeat CI104_RS16540 8cb9188a31b61182bf70dacbd29902d6 162 PIRSF PIRSF000441 2 161 1.9E-45 T 28-03-2018 IPR005881 Serine O-acetyltransferase GO:0005737|GO:0006535|GO:0009001 KEGG: 00270+2.3.1.30|KEGG: 00920+2.3.1.30|MetaCyc: PWY-6936|MetaCyc: PWY-7274 CI104_RS16540 8cb9188a31b61182bf70dacbd29902d6 162 TIGRFAM TIGR04016 WcaB: colanic acid biosynthesis acetyltransferase WcaB 17 162 6.4E-96 T 28-03-2018 IPR024027 Colanic acid biosynthesis, acetyltransferase, WcaB GO:0016747 CI104_RS26320 d8cbfe36a5a11a0fce02b12579993ca5 158 SUPERFAMILY SSF51182 26 121 5.68E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS26320 d8cbfe36a5a11a0fce02b12579993ca5 158 TIGRFAM TIGR04366 cupin_WbuC: cupin fold metalloprotein, WbuC family 6 132 1.1E-45 T 28-03-2018 IPR027565 Cupin fold metalloprotein, WbuC family CI104_RS26320 d8cbfe36a5a11a0fce02b12579993ca5 158 Gene3D G3DSA:2.60.120.10 4 137 6.4E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS27755 e2d486658c8a4fe9b446003751d36a66 74 SUPERFAMILY SSF57716 36 73 1.71E-7 T 28-03-2018 CI104_RS27755 e2d486658c8a4fe9b446003751d36a66 74 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 37 61 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CI104_RS27755 e2d486658c8a4fe9b446003751d36a66 74 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 35 66 9.3E-9 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CI104_RS14060 51123edf3e96d2e7e40ce41567c16fc8 108 Gene3D G3DSA:3.30.780.10 16 106 6.3E-20 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CI104_RS14060 51123edf3e96d2e7e40ce41567c16fc8 108 Pfam PF01253 Translation initiation factor SUI1 32 101 1.2E-18 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CI104_RS14060 51123edf3e96d2e7e40ce41567c16fc8 108 TIGRFAM TIGR01158 SUI1_rel: putative translation initiation factor SUI1 8 108 1.1E-38 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CI104_RS14060 51123edf3e96d2e7e40ce41567c16fc8 108 PIRSF PIRSF037511 1 108 7.5E-36 T 28-03-2018 IPR005872 Archaeal/bacterial translation initiation factor SUI1 GO:0003743 CI104_RS14060 51123edf3e96d2e7e40ce41567c16fc8 108 SUPERFAMILY SSF55159 6 104 2.62E-25 T 28-03-2018 IPR001950 SUI1 domain GO:0003743|GO:0006413 CI104_RS06450 f0627cb38ea9c7f3f20e77743fd0ea36 132 Gene3D G3DSA:3.10.129.10 1 132 1.7E-35 T 28-03-2018 CI104_RS06450 f0627cb38ea9c7f3f20e77743fd0ea36 132 TIGRFAM TIGR00051 TIGR00051: acyl-CoA thioester hydrolase, YbgC/YbaW family 7 118 2.2E-36 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CI104_RS06450 f0627cb38ea9c7f3f20e77743fd0ea36 132 SUPERFAMILY SSF54637 3 129 8.61E-39 T 28-03-2018 IPR029069 HotDog domain CI104_RS06450 f0627cb38ea9c7f3f20e77743fd0ea36 132 Pfam PF13279 Thioesterase-like superfamily 11 125 2.8E-16 T 28-03-2018 CI104_RS06450 f0627cb38ea9c7f3f20e77743fd0ea36 132 PIRSF PIRSF003230 1 132 1.5E-21 T 28-03-2018 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family GO:0016787 CI104_RS19385 c8338105783f39268f03fbb2b5aff970 290 Hamap MF_00397 2-(5''-triphosphoribosyl)-3'-dephosphocoenzyme-A synthase [citG]. 1 290 151.019 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CI104_RS19385 c8338105783f39268f03fbb2b5aff970 290 TIGRFAM TIGR03125 citrate_citG: triphosphoribosyl-dephospho-CoA synthase CitG 16 287 1.1E-99 T 28-03-2018 IPR017551 Triphosphoribosyl-dephospho-CoA synthase CitG GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CI104_RS19385 c8338105783f39268f03fbb2b5aff970 290 Pfam PF01874 ATP:dephospho-CoA triphosphoribosyl transferase 21 285 2.5E-81 T 28-03-2018 IPR002736 Triphosphoribosyl-dephospho-CoA protein GO:0005524|GO:0016310|GO:0046917 MetaCyc: PWY-5796 CI104_RS12295 d8bb09f5523180a483f0d3209f59017d 536 Gene3D G3DSA:3.50.50.60 187 533 0.0046 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS12295 d8bb09f5523180a483f0d3209f59017d 536 SUPERFAMILY SSF51905 2 213 2.78E-15 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS12295 d8bb09f5523180a483f0d3209f59017d 536 Gene3D G3DSA:3.50.50.60 1 186 2.1E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS12295 d8bb09f5523180a483f0d3209f59017d 536 Pfam PF13454 FAD-NAD(P)-binding 5 164 4.8E-30 T 28-03-2018 CI104_RS15775 51b2f91423e58fdfe0d47f8ef1567f5b 222 Gene3D G3DSA:1.10.3720.10 4 220 3.6E-46 T 28-03-2018 CI104_RS15775 51b2f91423e58fdfe0d47f8ef1567f5b 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 214 3.9E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS15775 51b2f91423e58fdfe0d47f8ef1567f5b 222 SUPERFAMILY SSF161098 13 200 6.54E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS15775 51b2f91423e58fdfe0d47f8ef1567f5b 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 3.0E-33 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS06990 7417657ee630107da071d361adefce45 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 222 243 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 25 36 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 61 70 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 PRINTS PR00983 Cysteinyl-tRNA synthetase signature 191 209 3.6E-30 T 28-03-2018 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 Pfam PF09190 DALR domain 341 402 4.1E-25 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 SMART SM00840 341 402 4.4E-29 T 28-03-2018 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR GO:0000166|GO:0004817|GO:0005524|GO:0005737|GO:0006423 KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 Pfam PF01406 tRNA synthetases class I (C) catalytic domain 15 313 1.2E-144 T 28-03-2018 IPR032678 tRNA synthetases class I, catalytic domain KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 Gene3D G3DSA:3.40.50.620 1 305 4.8E-92 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS06990 7417657ee630107da071d361adefce45 461 SUPERFAMILY SSF52374 1 313 1.74E-104 T 28-03-2018 CI104_RS06990 7417657ee630107da071d361adefce45 461 TIGRFAM TIGR00435 cysS: cysteine--tRNA ligase 2 460 1.2E-199 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 Hamap MF_00041 Cysteine--tRNA ligase [cysS]. 2 461 39.593 T 28-03-2018 IPR015803 Cysteine-tRNA ligase GO:0004817|GO:0005524|GO:0006423 KEGG: 00970+6.1.1.16 CI104_RS06990 7417657ee630107da071d361adefce45 461 Gene3D G3DSA:1.20.120.640 306 392 3.4E-22 T 28-03-2018 CI104_RS06990 7417657ee630107da071d361adefce45 461 SUPERFAMILY SSF47323 316 460 5.23E-45 T 28-03-2018 IPR009080 Aminoacyl-tRNA synthetase, class Ia, anticodon-binding GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 265 1.0E-100 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 65 76 1.4E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 151 164 1.4E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 124 141 1.4E-18 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 SUPERFAMILY SSF69189 285 378 8.63E-25 T 28-03-2018 IPR015956 Penicillin-binding protein-associated GO:0004180|GO:0006508 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 Pfam PF07943 Penicillin-binding protein 5, C-terminal domain 285 376 8.7E-24 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 SMART SM00936 285 376 4.6E-35 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 SUPERFAMILY SSF56601 11 285 2.6E-83 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 Gene3D G3DSA:3.40.710.10 22 302 5.4E-52 T 28-03-2018 CI104_RS08620 7f2e132de65051c51e9a438ebf1e39a2 400 Gene3D G3DSA:2.60.410.10 303 376 6.7E-19 T 28-03-2018 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal GO:0006508|GO:0009002 KEGG: 00550+3.4.16.4|MetaCyc: PWY-5265|MetaCyc: PWY-6471 CI104_RS20440 9fe70dc09499b415d18525733b413227 108 PIRSF PIRSF029883 1 108 1.8E-36 T 28-03-2018 IPR025499 Pectin degradation protein KdgF CI104_RS20440 9fe70dc09499b415d18525733b413227 108 Pfam PF07883 Cupin domain 33 90 6.6E-15 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS20440 9fe70dc09499b415d18525733b413227 108 SUPERFAMILY SSF51182 8 100 1.09E-25 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS20440 9fe70dc09499b415d18525733b413227 108 Gene3D G3DSA:2.60.120.10 1 108 1.8E-25 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PIRSF PIRSF000114 1 336 3.1E-101 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 SUPERFAMILY SSF48179 184 335 2.52E-57 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 Gene3D G3DSA:3.40.50.720 1 181 1.1E-39 T 28-03-2018 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 Pfam PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus 8 163 2.0E-50 T 28-03-2018 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal GO:0016616|GO:0046168|GO:0051287|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 136 156 6.2E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 60 87 6.2E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 202 226 6.2E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 10 27 6.2E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 177 201 6.2E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 PRINTS PR00077 NAD-dependent glycerol-3-phosphate dehydrogenase signature 242 259 6.2E-42 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 ProSitePatterns PS00957 NAD-dependent glycerol-3-phosphate dehydrogenase signature. 192 213 - T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 Hamap MF_00394 Glycerol-3-phosphate dehydrogenase [NAD(P)+] [gpsA]. 6 326 38.571 T 28-03-2018 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent GO:0004367|GO:0006072|GO:0009331|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 SUPERFAMILY SSF51735 8 182 1.27E-52 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 Pfam PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus 184 323 1.5E-52 T 28-03-2018 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal GO:0004367|GO:0005975|GO:0055114 KEGG: 00564+1.1.1.94|MetaCyc: PWY-5667|MetaCyc: PWY-5981|Reactome: R-HSA-1483166 CI104_RS00665 acd05ec74dc89890e4c131b818a2addf 339 Gene3D G3DSA:1.10.1040.10 193 339 1.8E-53 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS05865 8e34e750d65318102bb73172a57134d1 210 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 20 202 1.2E-69 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CI104_RS05865 8e34e750d65318102bb73172a57134d1 210 Pfam PF01810 LysE type translocator 17 206 3.0E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS05865 8e34e750d65318102bb73172a57134d1 210 PIRSF PIRSF006324 1 207 4.0E-51 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS24480 42ecb7be9fbf940bacff2ff73390f06e 292 SMART SM01133 16 258 2.1E-14 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS24480 42ecb7be9fbf940bacff2ff73390f06e 292 PIRSF PIRSF037840 1 291 3.0E-135 T 28-03-2018 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 CI104_RS24480 42ecb7be9fbf940bacff2ff73390f06e 292 Pfam PF01791 DeoC/LacD family aldolase 17 257 1.8E-58 T 28-03-2018 IPR002915 DeoC/FbaB/ lacD aldolase GO:0016829 Reactome: R-HSA-6798695|Reactome: R-HSA-71336 CI104_RS24480 42ecb7be9fbf940bacff2ff73390f06e 292 SUPERFAMILY SSF51569 3 288 1.64E-65 T 28-03-2018 CI104_RS24480 42ecb7be9fbf940bacff2ff73390f06e 292 Hamap MF_01912 Sulfofructosephosphate aldolase. 1 292 65.162 T 28-03-2018 IPR017291 Sulfofructosephosphate aldolase, YihT GO:0061595|GO:1902777 MetaCyc: PWY-7446 CI104_RS24480 42ecb7be9fbf940bacff2ff73390f06e 292 Gene3D G3DSA:3.20.20.70 1 292 1.7E-63 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS01475 dce1e94b6e099689d66e32f0dd30aa6c 295 Gene3D G3DSA:1.10.3720.10 13 295 8.0E-44 T 28-03-2018 CI104_RS01475 dce1e94b6e099689d66e32f0dd30aa6c 295 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 293 2.4E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01475 dce1e94b6e099689d66e32f0dd30aa6c 295 SUPERFAMILY SSF161098 56 282 8.76E-51 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 ProSitePatterns PS00480 Citrate synthase signature. 303 315 - T 28-03-2018 IPR019810 Citrate synthase active site GO:0006099|GO:0046912 Reactome: R-HSA-1268020|Reactome: R-HSA-71403 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 Gene3D G3DSA:1.10.230.10 282 379 5.1E-37 T 28-03-2018 IPR016143 Citrate synthase-like, small alpha subdomain CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 TIGRFAM TIGR01798 cit_synth_I: citrate (Si)-synthase 14 421 3.4E-242 T 28-03-2018 IPR010953 Citrate synthase, type I GO:0004108|GO:0005737 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PRINTS PR00143 Citrate synthase signature 165 178 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PRINTS PR00143 Citrate synthase signature 359 375 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PRINTS PR00143 Citrate synthase signature 219 234 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PRINTS PR00143 Citrate synthase signature 241 269 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PRINTS PR00143 Citrate synthase signature 379 393 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PRINTS PR00143 Citrate synthase signature 296 316 5.1E-56 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 SUPERFAMILY SSF48256 8 422 2.49E-167 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 PIRSF PIRSF001369 38 427 7.4E-176 T 28-03-2018 IPR024176 Citrate synthase, bacterial-type CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 Pfam PF00285 Citrate synthase, C-terminal domain 46 410 1.3E-131 T 28-03-2018 IPR002020 Citrate synthase GO:0046912 CI104_RS07875 2d944aac86e389da004e0c49f9b51204 427 Gene3D G3DSA:1.10.580.10 27 281 7.9E-87 T 28-03-2018 IPR016142 Citrate synthase-like, large alpha subdomain CI104_RS23350 3ee5b6701334b7b07523dc7e658f6df3 80 Pfam PF09583 Phage shock protein G (Phageshock_PspG) 1 64 8.6E-26 T 28-03-2018 IPR014318 Phage shock protein, PspG CI104_RS23350 3ee5b6701334b7b07523dc7e658f6df3 80 TIGRFAM TIGR02975 phageshock_pspG: phage shock protein G 2 65 2.2E-27 T 28-03-2018 IPR014318 Phage shock protein, PspG CI104_RS01405 a9c25eb5a81e866c733aa246009632a8 222 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01405 a9c25eb5a81e866c733aa246009632a8 222 SMART SM00382 27 214 1.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01405 a9c25eb5a81e866c733aa246009632a8 222 SUPERFAMILY SSF52540 1 216 3.33E-67 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01405 a9c25eb5a81e866c733aa246009632a8 222 Pfam PF00005 ABC transporter 18 165 1.8E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01405 a9c25eb5a81e866c733aa246009632a8 222 Gene3D G3DSA:3.40.50.300 1 220 4.2E-61 T 28-03-2018 CI104_RS01405 a9c25eb5a81e866c733aa246009632a8 222 TIGRFAM TIGR02673 FtsE: cell division ATP-binding protein FtsE 1 213 6.0E-93 T 28-03-2018 IPR005286 Cell division protein FtsE, ATP-binding GO:0005524|GO:0051301 CI104_RS20970 73def8bd08d6dffedc4798b8dedc4dfb 438 Gene3D G3DSA:3.20.20.140 91 377 2.3E-68 T 28-03-2018 CI104_RS20970 73def8bd08d6dffedc4798b8dedc4dfb 438 Pfam PF01979 Amidohydrolase family 72 434 1.4E-81 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS20970 73def8bd08d6dffedc4798b8dedc4dfb 438 TIGRFAM TIGR02967 guan_deamin: guanine deaminase 32 431 1.7E-188 T 28-03-2018 IPR014311 Guanine deaminase GO:0006147|GO:0008270|GO:0008892 KEGG: 00230+3.5.4.3|MetaCyc: PWY-5497|MetaCyc: PWY-6606|MetaCyc: PWY-6608|MetaCyc: PWY-7442|Reactome: R-HSA-74259 CI104_RS20970 73def8bd08d6dffedc4798b8dedc4dfb 438 SUPERFAMILY SSF51338 32 90 7.1E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20970 73def8bd08d6dffedc4798b8dedc4dfb 438 SUPERFAMILY SSF51556 75 378 9.36E-103 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS20970 73def8bd08d6dffedc4798b8dedc4dfb 438 Gene3D G3DSA:2.30.40.10 11 90 8.6E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS00410 992ab37d2b2310930ea93964922b749a 391 SUPERFAMILY SSF103473 4 382 2.09E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00410 992ab37d2b2310930ea93964922b749a 391 Gene3D G3DSA:1.20.1250.20 2 202 2.4E-22 T 28-03-2018 CI104_RS00410 992ab37d2b2310930ea93964922b749a 391 Gene3D G3DSA:1.20.1250.20 203 385 2.9E-18 T 28-03-2018 CI104_RS00410 992ab37d2b2310930ea93964922b749a 391 Pfam PF07690 Major Facilitator Superfamily 8 350 5.0E-21 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS27165 f64fdec4c1dc81ea029b9d87d3ee5b0f 350 Gene3D G3DSA:3.90.1530.10 1 117 3.9E-5 T 28-03-2018 CI104_RS27165 f64fdec4c1dc81ea029b9d87d3ee5b0f 350 SUPERFAMILY SSF109709 118 199 6.28E-12 T 28-03-2018 CI104_RS27610 519829fcc3d9d242b97f0c9b39e1c318 296 TIGRFAM TIGR03474 incFII_RepA: incFII family plasmid replication initiator RepA 15 289 7.3E-178 T 28-03-2018 IPR017837 Plasmid replication initiator, RepA, IncFII type CI104_RS27610 519829fcc3d9d242b97f0c9b39e1c318 296 Pfam PF02387 IncFII RepA protein family 17 255 7.0E-33 T 28-03-2018 IPR003446 Plasmid replication initiation, RepA GO:0006276 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 ProSitePatterns PS00099 Thiolases active site. 374 387 - T 28-03-2018 IPR020610 Thiolase, active site GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 Pfam PF02803 Thiolase, C-terminal domain 270 392 4.2E-52 T 28-03-2018 IPR020617 Thiolase, C-terminal GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 SUPERFAMILY SSF53901 4 267 2.95E-86 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 ProSitePatterns PS00098 Thiolases acyl-enzyme intermediate signature. 84 102 - T 28-03-2018 IPR020615 Thiolase, acyl-enzyme intermediate active site GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 ProSitePatterns PS00737 Thiolases signature 2. 339 355 - T 28-03-2018 IPR020613 Thiolase, conserved site GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 SUPERFAMILY SSF53901 271 392 2.6E-45 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 Gene3D G3DSA:3.40.47.10 1 132 8.2E-35 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 Gene3D G3DSA:3.40.47.10 150 265 6.9E-27 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 Pfam PF00108 Thiolase, N-terminal domain 4 263 3.9E-104 T 28-03-2018 IPR020616 Thiolase, N-terminal GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 PIRSF PIRSF000429 1 394 2.7E-133 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 TIGRFAM TIGR01930 AcCoA-C-Actrans: acetyl-CoA C-acyltransferase 6 391 1.1E-149 T 28-03-2018 IPR002155 Thiolase GO:0008152|GO:0016747 CI104_RS17270 84ae2ce2ce921d2887d66cc1eb5c9b06 394 Gene3D G3DSA:3.40.47.10 266 390 1.7E-35 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 Pfam PF14863 Alkyl sulfatase dimerisation 388 526 4.1E-61 T 28-03-2018 IPR029228 Alkyl sulfatase dimerisation domain GO:0046983 CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 SMART SM00849 129 351 7.4E-26 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 Gene3D G3DSA:3.60.15.10 103 404 4.1E-21 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 Gene3D G3DSA:3.30.1050.10 528 658 9.8E-33 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 Pfam PF00753 Metallo-beta-lactamase superfamily 126 351 6.4E-38 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 Pfam PF14864 Alkyl sulfatase C-terminal 534 658 2.0E-41 T 28-03-2018 IPR029229 Alkyl sulfatase, C-terminal CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 SUPERFAMILY SSF56281 29 528 8.68E-153 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS13275 714f1f3e19a8dc3b045cc11612879c7a 658 SUPERFAMILY SSF55718 536 658 5.18E-37 T 28-03-2018 IPR003033 SCP2 sterol-binding domain CI104_RS05960 1dc7607c22e13775853b8a1d88605cf7 513 Pfam PF05231 MASE1 11 281 2.2E-43 T 28-03-2018 IPR007895 MASE1 CI104_RS05960 1dc7607c22e13775853b8a1d88605cf7 513 SMART SM00387 419 508 1.3E-11 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS05960 1dc7607c22e13775853b8a1d88605cf7 513 SUPERFAMILY SSF55874 395 505 4.98E-21 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS05960 1dc7607c22e13775853b8a1d88605cf7 513 Gene3D G3DSA:3.30.565.10 340 507 2.7E-26 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS05960 1dc7607c22e13775853b8a1d88605cf7 513 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 423 506 3.4E-9 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS05960 1dc7607c22e13775853b8a1d88605cf7 513 Pfam PF07730 Histidine kinase 316 380 2.3E-14 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 Gene3D G3DSA:3.40.50.720 2 115 9.9E-30 T 28-03-2018 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 SUPERFAMILY SSF52283 2 135 4.54E-46 T 28-03-2018 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 147 174 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 5 327 4.0E-36 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 Gene3D G3DSA:3.40.50.720 116 300 1.6E-51 T 28-03-2018 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 297 8.7E-53 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 ProSitePatterns PS00670 D-isomer specific 2-hydroxyacid dehydrogenases signature 2. 194 216 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 SUPERFAMILY SSF51735 102 298 7.52E-56 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS13705 fe2216ae949cdc24e394103faf7fb4da 329 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 223 239 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS08580 5186224a835e844daff9055f477136c1 512 PIRSF PIRSF002741 12 511 2.1E-110 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS08580 5186224a835e844daff9055f477136c1 512 Gene3D G3DSA:3.90.76.10 37 181 3.9E-41 T 28-03-2018 CI104_RS08580 5186224a835e844daff9055f477136c1 512 SUPERFAMILY SSF53850 30 511 1.34E-145 T 28-03-2018 CI104_RS08580 5186224a835e844daff9055f477136c1 512 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 71 429 7.4E-100 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS08580 5186224a835e844daff9055f477136c1 512 Gene3D G3DSA:3.10.105.10 275 486 4.6E-60 T 28-03-2018 CI104_RS08580 5186224a835e844daff9055f477136c1 512 Gene3D G3DSA:3.40.190.10 182 274 1.8E-28 T 28-03-2018 CI104_RS16770 b5760011af424dd7aa2491cd56476529 184 SUPERFAMILY SSF55729 14 177 4.46E-29 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS16770 b5760011af424dd7aa2491cd56476529 184 Gene3D G3DSA:3.40.630.30 9 181 2.5E-33 T 28-03-2018 CI104_RS16770 b5760011af424dd7aa2491cd56476529 184 Pfam PF13420 Acetyltransferase (GNAT) domain 14 169 8.7E-19 T 28-03-2018 CI104_RS04750 92457c75f8e457136304583fc911c574 968 SUPERFAMILY SSF52540 480 644 4.02E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04750 92457c75f8e457136304583fc911c574 968 SUPERFAMILY SSF52540 273 337 4.02E-43 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04750 92457c75f8e457136304583fc911c574 968 Pfam PF00176 SNF2 family N-terminal domain 174 441 2.4E-18 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CI104_RS04750 92457c75f8e457136304583fc911c574 968 SMART SM00487 150 342 1.1E-20 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS04750 92457c75f8e457136304583fc911c574 968 SUPERFAMILY SSF52540 132 376 6.31E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04750 92457c75f8e457136304583fc911c574 968 Hamap MF_01821 RNA polymerase-associated protein RapA [rapA]. 1 966 29.316 T 28-03-2018 IPR023949 RNA polymerase-associated protein RapA GO:0006355 CI104_RS04750 92457c75f8e457136304583fc911c574 968 Pfam PF12137 RNA polymerase recycling family C-terminal 605 965 1.1E-157 T 28-03-2018 IPR022737 RNA polymerase recycling, bacterial, C-terminal GO:0016817 CI104_RS04750 92457c75f8e457136304583fc911c574 968 Pfam PF00271 Helicase conserved C-terminal domain 495 601 5.9E-15 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS04750 92457c75f8e457136304583fc911c574 968 SMART SM00490 517 601 2.1E-17 T 28-03-2018 IPR001650 Helicase, C-terminal CI104_RS04750 92457c75f8e457136304583fc911c574 968 Gene3D G3DSA:3.40.50.300 484 958 8.7E-22 T 28-03-2018 CI104_RS04750 92457c75f8e457136304583fc911c574 968 Gene3D G3DSA:3.40.50.10810 130 371 1.0E-26 T 28-03-2018 CI104_RS21945 5813e26ead0c6fc3c2906d1261c71eac 347 SUPERFAMILY SSF51735 145 303 1.05E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21945 5813e26ead0c6fc3c2906d1261c71eac 347 Gene3D G3DSA:3.40.50.720 163 316 7.0E-21 T 28-03-2018 CI104_RS21945 5813e26ead0c6fc3c2906d1261c71eac 347 Pfam PF00107 Zinc-binding dehydrogenase 180 304 3.0E-22 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS21945 5813e26ead0c6fc3c2906d1261c71eac 347 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 30 139 8.7E-27 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS21945 5813e26ead0c6fc3c2906d1261c71eac 347 SUPERFAMILY SSF50129 8 176 2.04E-38 T 28-03-2018 IPR011032 GroES-like CI104_RS21945 5813e26ead0c6fc3c2906d1261c71eac 347 Gene3D G3DSA:3.90.180.10 8 162 4.3E-31 T 28-03-2018 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Pfam PF07676 WD40-like Beta Propeller Repeat 369 396 0.0032 T 28-03-2018 IPR011659 WD40-like Beta Propeller CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Pfam PF07676 WD40-like Beta Propeller Repeat 199 223 4.3E-5 T 28-03-2018 IPR011659 WD40-like Beta Propeller CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Pfam PF07676 WD40-like Beta Propeller Repeat 281 315 4.4E-10 T 28-03-2018 IPR011659 WD40-like Beta Propeller CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Pfam PF07676 WD40-like Beta Propeller Repeat 237 272 1.8E-9 T 28-03-2018 IPR011659 WD40-like Beta Propeller CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Gene3D G3DSA:3.40.50.10070 22 164 7.1E-38 T 28-03-2018 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Gene3D G3DSA:2.130.10.10 165 257 4.1E-9 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Gene3D G3DSA:2.130.10.150 258 429 5.8E-32 T 28-03-2018 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 TIGRFAM TIGR02800 propeller_TolB: Tol-Pal system beta propeller repeat protein TolB 15 427 1.7E-156 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Pfam PF04052 TolB amino-terminal domain 23 121 3.6E-32 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 SUPERFAMILY SSF52964 28 161 2.35E-40 T 28-03-2018 IPR007195 TolB, N-terminal GO:0015031|GO:0042597 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 Hamap MF_00671 Protein TolB [tolB]. 5 426 34.506 T 28-03-2018 IPR014167 Tol-Pal system beta propeller repeat-containing protein, TolB GO:0017038|GO:0042597 CI104_RS08075 4a2546c59404411dd98afd31bb7ca373 430 SUPERFAMILY SSF69304 155 428 2.75E-53 T 28-03-2018 CI104_RS25790 d32b0ea0b907a39dc36f552ce0f7565c 138 Pfam PF00756 Putative esterase 21 137 4.7E-30 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CI104_RS25790 d32b0ea0b907a39dc36f552ce0f7565c 138 Gene3D G3DSA:3.40.50.1820 1 138 2.1E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS25790 d32b0ea0b907a39dc36f552ce0f7565c 138 SUPERFAMILY SSF53474 1 136 9.83E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS27440 d32b0ea0b907a39dc36f552ce0f7565c 138 Pfam PF00756 Putative esterase 21 137 4.7E-30 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CI104_RS27440 d32b0ea0b907a39dc36f552ce0f7565c 138 Gene3D G3DSA:3.40.50.1820 1 138 2.1E-16 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS27440 d32b0ea0b907a39dc36f552ce0f7565c 138 SUPERFAMILY SSF53474 1 136 9.83E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS05840 0a1325ac6e814db6f608967d7290cd0a 281 Pfam PF13649 Methyltransferase domain 69 163 3.0E-21 T 28-03-2018 CI104_RS05840 0a1325ac6e814db6f608967d7290cd0a 281 Gene3D G3DSA:3.40.50.150 32 280 6.7E-34 T 28-03-2018 CI104_RS05840 0a1325ac6e814db6f608967d7290cd0a 281 SUPERFAMILY SSF53335 49 265 3.62E-37 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS25165 0a6f5dacd0b1bf845d60f5b9e16da4dd 156 Gene3D G3DSA:1.20.5.620 62 122 5.5E-16 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CI104_RS25165 0a6f5dacd0b1bf845d60f5b9e16da4dd 156 TIGRFAM TIGR01144 ATP_synt_b: ATP synthase F0, B subunit 10 156 3.8E-61 T 28-03-2018 IPR005864 ATP synthase, F0 complex, subunit b, bacterial GO:0015078|GO:0015986|GO:0045263 CI104_RS25165 0a6f5dacd0b1bf845d60f5b9e16da4dd 156 SUPERFAMILY SSF81573 63 121 2.22E-15 T 28-03-2018 IPR028987 F-type ATP synthase subunit B-like, membrane domain CI104_RS25165 0a6f5dacd0b1bf845d60f5b9e16da4dd 156 Hamap MF_01398 ATP synthase subunit b [atpF]. 1 138 13.07 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CI104_RS25165 0a6f5dacd0b1bf845d60f5b9e16da4dd 156 Pfam PF00430 ATP synthase B/B' CF(0) 6 137 5.7E-40 T 28-03-2018 IPR002146 ATP synthase, F0 complex, subunit b/b', bacterial/chloroplast GO:0015078|GO:0015986|GO:0045263 CI104_RS00705 0212f60ab6a3438e36c0bc038d0b5288 68 Gene3D G3DSA:1.20.970.20 14 63 1.6E-16 T 28-03-2018 CI104_RS00705 0212f60ab6a3438e36c0bc038d0b5288 68 SUPERFAMILY SSF46575 15 64 2.22E-6 T 28-03-2018 CI104_RS09855 0ad44711dd2e767f06780ca969e6cd39 248 Pfam PF13847 Methyltransferase domain 36 156 9.4E-12 T 28-03-2018 IPR025714 Methyltransferase domain CI104_RS09855 0ad44711dd2e767f06780ca969e6cd39 248 SUPERFAMILY SSF53335 5 244 1.86E-46 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09855 0ad44711dd2e767f06780ca969e6cd39 248 PIRSF PIRSF034653 1 248 9.8E-117 T 28-03-2018 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type CI104_RS09855 0ad44711dd2e767f06780ca969e6cd39 248 Gene3D G3DSA:3.40.50.150 1 248 1.7E-42 T 28-03-2018 CI104_RS15105 04fc732d076679748748cc280f23d8e3 454 Pfam PF03313 Serine dehydratase alpha chain 185 448 2.5E-94 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CI104_RS15105 04fc732d076679748748cc280f23d8e3 454 SUPERFAMILY SSF143548 16 158 4.71E-46 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CI104_RS15105 04fc732d076679748748cc280f23d8e3 454 Gene3D G3DSA:3.30.1330.90 10 158 5.0E-51 T 28-03-2018 IPR029009 Allosteric substrate binding domain Reactome: R-HSA-977347 CI104_RS15105 04fc732d076679748748cc280f23d8e3 454 Pfam PF03315 Serine dehydratase beta chain 3 155 4.8E-56 T 28-03-2018 IPR005131 Serine dehydratase beta chain GO:0003941|GO:0006094|GO:0051539 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CI104_RS15105 04fc732d076679748748cc280f23d8e3 454 Gene3D G3DSA:1.10.4100.10 264 444 1.2E-33 T 28-03-2018 CI104_RS15105 04fc732d076679748748cc280f23d8e3 454 TIGRFAM TIGR00720 sda_mono: L-serine ammonia-lyase 2 451 1.5E-229 T 28-03-2018 IPR004644 Iron-sulphur-dependent L-serine dehydratase single chain form GO:0003941|GO:0006094 KEGG: 00260+4.3.1.17|KEGG: 00270+4.3.1.17 CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 Pfam PF07690 Major Facilitator Superfamily 35 397 2.3E-33 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 SUPERFAMILY SSF103473 20 450 2.62E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 Gene3D G3DSA:1.20.1250.20 22 228 4.9E-23 T 28-03-2018 CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 ProSitePatterns PS00942 glpT family of transporters signature. 156 172 - T 28-03-2018 IPR021159 Glycerate/sugar phosphate transporter, conserved site GO:0005215|GO:0006810|GO:0016021 Reactome: R-HSA-70153 CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 PIRSF PIRSF002808 11 461 1.7E-102 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 Gene3D G3DSA:1.20.1250.20 246 462 4.2E-19 T 28-03-2018 CI104_RS00210 02994bf0a438993de953ed271b92c6aa 463 TIGRFAM TIGR00881 2A0104: phosphoglycerate transporter family protein 36 426 2.2E-147 T 28-03-2018 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Pfam PF01571 Aminomethyltransferase folate-binding domain 7 254 3.3E-82 T 28-03-2018 IPR006222 Glycine cleavage T-protein-like, N-terminal CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Gene3D G3DSA:3.30.1360.120 2 135 1.5E-32 T 28-03-2018 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Gene3D G3DSA:2.40.30.110 277 364 4.4E-19 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Hamap MF_00259 Aminomethyltransferase [gcvT]. 1 359 44.248 T 28-03-2018 IPR022903 Glycine cleavage system T protein, bacteria GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 SUPERFAMILY SSF101790 271 361 2.29E-26 T 28-03-2018 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Pfam PF08669 Glycine cleavage T-protein C-terminal barrel domain 262 353 1.6E-17 T 28-03-2018 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Gene3D G3DSA:3.30.1360.120 136 231 1.9E-23 T 28-03-2018 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 SUPERFAMILY SSF103025 3 277 2.67E-89 T 28-03-2018 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 Gene3D G3DSA:4.10.1250.10 232 276 1.9E-16 T 28-03-2018 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 TIGRFAM TIGR00528 gcvT: glycine cleavage system T protein 2 359 1.8E-164 T 28-03-2018 IPR006223 Glycine cleavage system T protein GO:0004047|GO:0006546 KEGG: 00260+2.1.2.10|KEGG: 00670+2.1.2.10|Reactome: R-HSA-6783984 CI104_RS21075 f13283c5fd76be018f300b96db2f4c23 364 PIRSF PIRSF006487 1 363 3.5E-78 T 28-03-2018 CI104_RS09315 5cbec68842f6c06db1495c6bf9f13328 219 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 213 7.1E-43 T 28-03-2018 IPR006214 Bax inhibitor 1-related CI104_RS09315 5cbec68842f6c06db1495c6bf9f13328 219 ProSitePatterns PS01243 Bax inhibitor-1 family signature. 87 117 - T 28-03-2018 IPR006213 Bax inhibitor 1, conserved site GO:0016021|GO:0043066 CI104_RS01740 c3263911b3bbd1a1601461007f446b86 133 PIRSF PIRSF016821 6 133 3.6E-40 T 28-03-2018 IPR025708 Heat shock protein 15 GO:0003677|GO:0003727|GO:0034605|GO:0043023 CI104_RS01740 c3263911b3bbd1a1601461007f446b86 133 Gene3D G3DSA:3.10.290.10 2 105 1.5E-25 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS01740 c3263911b3bbd1a1601461007f446b86 133 SMART SM00363 9 72 1.0E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS01740 c3263911b3bbd1a1601461007f446b86 133 Pfam PF01479 S4 domain 9 53 3.1E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS01740 c3263911b3bbd1a1601461007f446b86 133 SUPERFAMILY SSF55174 7 103 1.57E-31 T 28-03-2018 CI104_RS23555 44141d41108153bff0a6bef2a1b915b7 265 Pfam PF03609 PTS system sorbose-specific iic component 6 237 6.1E-73 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS23555 44141d41108153bff0a6bef2a1b915b7 265 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 265 3.9E-129 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 SUPERFAMILY SSF75217 187 343 1.26E-39 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 SMART SM00967 109 184 1.8E-8 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 SUPERFAMILY SSF55315 103 179 1.65E-9 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 Pfam PF08032 RNA 2'-O ribose methyltransferase substrate binding 110 181 1.5E-11 T 28-03-2018 IPR013123 RNA 2-O ribose methyltransferase, substrate binding GO:0008168 Reactome: R-HSA-6793080 CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 Gene3D G3DSA:3.40.1280.10 186 345 1.3E-38 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 Gene3D G3DSA:3.30.1330.30 97 179 3.3E-8 T 28-03-2018 IPR029064 50S ribosomal protein L30e-like CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 Pfam PF00588 SpoU rRNA Methylase family 199 336 1.8E-31 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CI104_RS18880 b19651380200d108f010a74837d1a3ae 345 PIRSF PIRSF006280 1 345 6.7E-170 T 28-03-2018 IPR016479 tRNA/rRNA methyltransferase, YfiF, predicted GO:0008168 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 Pfam PF00152 tRNA synthetases class II (D, K and N) 15 321 7.0E-50 T 28-03-2018 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) GO:0000166|GO:0004812|GO:0005524|GO:0006418 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 SUPERFAMILY SSF55681 12 320 4.58E-85 T 28-03-2018 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 Hamap MF_00174 Elongation factor P--(R)-beta-lysine ligase [epmA]. 2 325 57.823 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 TIGRFAM TIGR00462 genX: EF-P lysine aminoacylase GenX 17 320 2.0E-133 T 28-03-2018 IPR004525 Elongation factor P--(R)-beta-lysine ligase GO:0004824|GO:0005524|GO:0005737|GO:0006430 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 99 116 2.5E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 PRINTS PR00982 Lysyl-tRNA synthetase signature 31 41 2.5E-6 T 28-03-2018 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal GO:0000166|GO:0004824|GO:0005524|GO:0005737|GO:0006430 KEGG: 00970+6.1.1.6|Reactome: R-HSA-2408517|Reactome: R-HSA-379716|Reactome: R-HSA-379726 CI104_RS22610 0fb309263af2f91e24d73ec741e1c406 325 Gene3D G3DSA:3.30.930.10 9 324 1.8E-70 T 28-03-2018 CI104_RS05400 ca93f30e08c20d5d7582c28dfb9f4c75 72 Pfam PF06786 Uncharacterised protein family (UPF0253) 8 71 1.4E-34 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 CI104_RS05400 ca93f30e08c20d5d7582c28dfb9f4c75 72 Hamap MF_01064 UPF0253 protein YaeP [yaeP]. 7 72 26.775 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 CI104_RS05400 ca93f30e08c20d5d7582c28dfb9f4c75 72 ProDom PD054643 UPF0253 YAEP CYTOPLASMIC VP2335 YPO1064.1/Y3113/YP2785 VC0872 VV2574 PBPRA2947 VV11836 7 72 7.0E-30 T 28-03-2018 IPR009624 Uncharacterised protein family UPF0253 CI104_RS19425 9da8a863a1ef18d4c4caf03f84ba5fbf 362 SUPERFAMILY SSF54506 2 166 2.45E-63 T 28-03-2018 CI104_RS19425 9da8a863a1ef18d4c4caf03f84ba5fbf 362 SUPERFAMILY SSF54506 170 356 1.22E-57 T 28-03-2018 CI104_RS19425 9da8a863a1ef18d4c4caf03f84ba5fbf 362 Gene3D G3DSA:3.10.310.10 1 174 1.1E-72 T 28-03-2018 CI104_RS19425 9da8a863a1ef18d4c4caf03f84ba5fbf 362 Pfam PF04303 PrpF protein 1 354 2.2E-131 T 28-03-2018 IPR007400 PrpF protein CI104_RS19425 9da8a863a1ef18d4c4caf03f84ba5fbf 362 Gene3D G3DSA:3.10.310.10 175 336 8.0E-53 T 28-03-2018 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 SMART SM00388 203 269 5.3E-21 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 SUPERFAMILY SSF55874 259 423 2.1E-43 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 TIGRFAM TIGR02966 phoR_proteo: phosphate regulon sensor kinase PhoR 95 420 2.7E-136 T 28-03-2018 IPR014310 Signal transduction histidine kinase, phosphate regulon sensor PhoR GO:0000155|GO:0000160|GO:0004673|GO:0016021 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 313 424 1.5E-25 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Pfam PF11808 Domain of unknown function (DUF3329) 6 91 3.1E-26 T 28-03-2018 IPR021766 Protein of unknown function DUF3329 GO:0004673 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Gene3D G3DSA:3.30.450.20 97 208 5.3E-13 T 28-03-2018 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Pfam PF00989 PAS fold 99 194 4.2E-10 T 28-03-2018 IPR013767 PAS fold GO:0006355 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 368 378 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 350 364 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 403 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 PRINTS PR00344 Bacterial sensor protein C-terminal signature 409 422 3.0E-15 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Pfam PF00512 His Kinase A (phospho-acceptor) domain 203 268 6.8E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Gene3D G3DSA:3.30.565.10 274 431 2.2E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 SUPERFAMILY SSF47384 190 268 6.28E-19 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 Gene3D G3DSA:1.10.287.130 209 265 1.4E-17 T 28-03-2018 CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 SMART SM00387 313 425 6.3E-39 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 SMART SM00091 98 164 9.8E-5 T 28-03-2018 IPR000014 PAS domain CI104_RS06135 10bec1ddc57037c9825e8ed09b587096 431 SUPERFAMILY SSF55785 87 195 3.84E-9 T 28-03-2018 IPR000014 PAS domain CI104_RS05495 60960104c937a21e5ece2c9754d3d83a 392 Gene3D G3DSA:1.20.1250.20 3 187 1.5E-24 T 28-03-2018 CI104_RS05495 60960104c937a21e5ece2c9754d3d83a 392 Gene3D G3DSA:1.20.1250.20 188 381 6.7E-23 T 28-03-2018 CI104_RS05495 60960104c937a21e5ece2c9754d3d83a 392 SUPERFAMILY SSF103473 3 385 3.53E-60 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS05495 60960104c937a21e5ece2c9754d3d83a 392 Pfam PF07690 Major Facilitator Superfamily 9 318 2.7E-37 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 232 251 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 45 64 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 155 175 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 327 345 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 18 41 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 90 110 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 293 312 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 348 367 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 PRINTS PR00166 Aromatic amino acid permease signature 193 215 2.3E-104 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 Pfam PF03222 Tryptophan/tyrosine permease family 10 402 9.5E-154 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 TIGRFAM TIGR00837 araaP: aromatic amino acid transport protein 15 395 1.7E-160 T 28-03-2018 IPR013059 Tryptophan/tyrosine transporter GO:0005887|GO:0015173|GO:0015801 CI104_RS02930 122433bf0083be42a1ecd2b15de47574 414 ProSitePatterns PS00594 Aromatic amino acids permeases signature. 25 41 - T 28-03-2018 IPR013061 Tryptophan/tryrosine permease, conserved site CI104_RS01240 95cfb14bfad5497059803b588d847207 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 308 8.8E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01240 95cfb14bfad5497059803b588d847207 314 SUPERFAMILY SSF161098 94 308 1.11E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01240 95cfb14bfad5497059803b588d847207 314 TIGRFAM TIGR02789 nickel_nikB: nickel ABC transporter, permease subunit NikB 1 313 2.1E-165 T 28-03-2018 IPR014156 Nickel ABC transporter, permease subunit NikB GO:0015099|GO:0035444 CI104_RS01240 95cfb14bfad5497059803b588d847207 314 Gene3D G3DSA:1.10.3720.10 2 296 1.0E-43 T 28-03-2018 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 Pfam PF00005 ABC transporter 21 162 6.7E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 Pfam PF08402 TOBE domain 281 351 1.2E-6 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 SUPERFAMILY SSF52540 4 243 4.17E-84 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 Gene3D G3DSA:2.40.50.140 293 344 1.5E-10 T 28-03-2018 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 Gene3D G3DSA:2.40.50.100 240 292 1.0E-11 T 28-03-2018 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 SUPERFAMILY SSF50331 237 359 3.89E-26 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 Gene3D G3DSA:3.40.50.300 1 237 1.2E-68 T 28-03-2018 CI104_RS13925 d1e104bae98722f098b53bc5daca52cf 360 SMART SM00382 29 219 4.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24005 ceeac470114fb3699260102d141af4e0 106 Gene3D G3DSA:3.40.50.2300 3 102 6.9E-41 T 28-03-2018 CI104_RS24005 ceeac470114fb3699260102d141af4e0 106 SUPERFAMILY SSF52794 3 100 5.06E-35 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS24005 ceeac470114fb3699260102d141af4e0 106 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 5 89 3.1E-40 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CI104_RS24005 ceeac470114fb3699260102d141af4e0 106 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 6 96 1.1E-21 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS27540 ea6bdde7f347948202566b448049517f 316 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 10 314 6.9E-66 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA CI104_RS27540 ea6bdde7f347948202566b448049517f 316 Gene3D G3DSA:1.10.10.60 246 314 0.0016 T 28-03-2018 CI104_RS27540 ea6bdde7f347948202566b448049517f 316 Pfam PF04754 Putative transposase, YhgA-like 9 206 1.2E-83 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like CI104_RS27970 a791e556ed1d6779cd284f3b967799c5 388 Gene3D G3DSA:1.10.1660.10 36 99 1.2E-4 T 28-03-2018 CI104_RS27970 a791e556ed1d6779cd284f3b967799c5 388 SUPERFAMILY SSF52540 106 374 1.76E-37 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27970 a791e556ed1d6779cd284f3b967799c5 388 Gene3D G3DSA:3.40.50.300 105 384 7.2E-37 T 28-03-2018 CI104_RS27970 a791e556ed1d6779cd284f3b967799c5 388 Pfam PF13614 AAA domain 108 286 3.4E-29 T 28-03-2018 IPR025669 AAA domain CI104_RS19705 fe2741ddfad2a0d9afc6f4ec86e15c0d 165 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 14 158 1.4E-62 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS19705 fe2741ddfad2a0d9afc6f4ec86e15c0d 165 Pfam PF02464 Competence-damaged protein 8 160 7.2E-60 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS19705 fe2741ddfad2a0d9afc6f4ec86e15c0d 165 SUPERFAMILY SSF142433 3 161 3.79E-58 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS19705 fe2741ddfad2a0d9afc6f4ec86e15c0d 165 Gene3D G3DSA:3.90.950.20 1 165 3.7E-60 T 28-03-2018 CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 Gene3D G3DSA:2.40.170.20 195 750 2.8E-92 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 48 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 733 750 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 Gene3D G3DSA:2.170.130.10 31 194 4.1E-28 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 SUPERFAMILY SSF56935 69 750 3.21E-141 T 28-03-2018 CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 Pfam PF07715 TonB-dependent Receptor Plug Domain 78 181 1.8E-20 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 Pfam PF00593 TonB dependent receptor 271 749 2.1E-64 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS05200 90136bd0bba00f47a0d81865b980bd92 750 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 79 750 1.4E-187 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS10385 5c2a8b699ffa04fe7df83d7b9560accd 194 Pfam PF13302 Acetyltransferase (GNAT) domain 17 162 2.3E-19 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS10385 5c2a8b699ffa04fe7df83d7b9560accd 194 Gene3D G3DSA:3.40.630.30 1 194 3.7E-31 T 28-03-2018 CI104_RS10385 5c2a8b699ffa04fe7df83d7b9560accd 194 SUPERFAMILY SSF55729 12 185 1.63E-42 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 Gene3D G3DSA:1.10.150.240 16 76 3.5E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 Gene3D G3DSA:3.40.50.1000 77 200 3.1E-20 T 28-03-2018 IPR023214 HAD-like domain CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 SUPERFAMILY SSF56784 5 202 2.86E-41 T 28-03-2018 IPR023214 HAD-like domain CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 51 190 3.1E-19 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 TIGRFAM TIGR02009 PGMB-YQAB-SF: beta-phosphoglucomutase family hydrolase 5 190 3.9E-61 T 28-03-2018 IPR010976 Beta-phosphoglucomutase hydrolase CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 TIGRFAM TIGR01990 bPGM: beta-phosphoglucomutase 5 191 7.7E-78 T 28-03-2018 IPR010972 Beta-phosphoglucomutase GO:0000287|GO:0005975|GO:0008801 KEGG: 00500+5.4.2.6|MetaCyc: PWY-2721|MetaCyc: PWY-2722|MetaCyc: PWY-7459 CI104_RS13930 fb15dfc7bf6869762dead76f11d9c080 220 Pfam PF13419 Haloacid dehalogenase-like hydrolase 6 189 2.5E-20 T 28-03-2018 IPR023214 HAD-like domain CI104_RS00105 5dd87202d6ba2eeb29ebd395cf9bf5f8 115 Pfam PF02656 Domain of unknown function (DUF202) 13 79 1.4E-15 T 28-03-2018 IPR003807 Domain of unknown function DUF202 CI104_RS00105 5dd87202d6ba2eeb29ebd395cf9bf5f8 115 Gene3D G3DSA:1.20.1050.50 4 115 5.0E-4 T 28-03-2018 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 Hamap MF_00930 Transcription elongation factor GreB [greB]. 1 156 54.397 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 Pfam PF03449 Transcription elongation factor, N-terminal 5 74 4.2E-27 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 119 135 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 SUPERFAMILY SSF54534 80 155 9.55E-21 T 28-03-2018 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 Gene3D G3DSA:1.10.287.180 3 75 9.3E-30 T 28-03-2018 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 SUPERFAMILY SSF46557 3 78 2.62E-28 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 TIGRFAM TIGR01461 greB: transcription elongation factor GreB 2 157 5.2E-87 T 28-03-2018 IPR006358 Transcription elongation factor GreB GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 PIRSF PIRSF006092 1 157 9.3E-47 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 Gene3D G3DSA:3.10.50.30 76 157 4.2E-22 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 154 29.08 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CI104_RS01715 bbb9222ff366a595ad1f596831120abf 157 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 81 155 6.3E-23 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 PIRSF PIRSF000549 1 644 6.8E-292 T 28-03-2018 IPR016230 Serine-protein kinase, PrkA GO:0004672 CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 Pfam PF08298 PrkA AAA domain 20 380 6.6E-179 T 28-03-2018 IPR013153 PrkA AAA domain CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 SUPERFAMILY SSF52540 75 145 5.47E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 SUPERFAMILY SSF52540 241 368 5.47E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 Pfam PF06798 PrkA serine protein kinase C-terminal domain 383 636 2.4E-75 T 28-03-2018 IPR010650 PrkA C-terminal domain CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 SMART SM00763 19 380 1.7E-217 T 28-03-2018 IPR013153 PrkA AAA domain CI104_RS11605 bd582d0b05ac41bd6e416c17ca2fdb64 644 Gene3D G3DSA:3.40.50.300 62 355 1.2E-13 T 28-03-2018 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 SUPERFAMILY SSF52540 2 636 9.29E-163 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Gene3D G3DSA:3.40.50.300 1 134 3.8E-24 T 28-03-2018 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Gene3D G3DSA:3.40.50.300 135 276 2.2E-28 T 28-03-2018 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Pfam PF13361 UvrD-like helicase C-terminal domain 271 613 2.1E-71 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Gene3D G3DSA:1.10.486.10 377 552 4.9E-38 T 28-03-2018 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Gene3D G3DSA:3.40.50.300 277 376 4.9E-21 T 28-03-2018 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 TIGRFAM TIGR01074 rep: ATP-dependent DNA helicase Rep 2 667 0.0 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Hamap MF_01920 ATP-dependent DNA helicase Rep [rep]. 1 668 41.053 T 28-03-2018 IPR005752 ATP-dependent DNA helicase Rep GO:0003677|GO:0004003|GO:0005524|GO:0006268 CI104_RS24955 a1e5da9bdb1f51c8d98130f673b1dad4 674 Pfam PF00580 UvrD/REP helicase N-terminal domain 3 265 9.5E-73 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CI104_RS18225 48cd8d07f0e31f217d64847c89377df0 350 SUPERFAMILY SSF46689 240 290 2.33E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS18225 48cd8d07f0e31f217d64847c89377df0 350 SMART SM00342 256 342 9.2E-22 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS18225 48cd8d07f0e31f217d64847c89377df0 350 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 293 338 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS18225 48cd8d07f0e31f217d64847c89377df0 350 Gene3D G3DSA:1.10.10.60 151 292 4.2E-12 T 28-03-2018 CI104_RS18225 48cd8d07f0e31f217d64847c89377df0 350 Gene3D G3DSA:1.10.10.60 293 349 1.2E-4 T 28-03-2018 CI104_RS18225 48cd8d07f0e31f217d64847c89377df0 350 Pfam PF12833 Helix-turn-helix domain 262 342 6.0E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS07895 2b7d326d75cd658e31698ef57c3d78c6 115 PIRSF PIRSF000169 1 115 1.9E-41 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CI104_RS07895 2b7d326d75cd658e31698ef57c3d78c6 115 Gene3D G3DSA:1.20.1300.10 1 115 5.1E-18 T 28-03-2018 CI104_RS07895 2b7d326d75cd658e31698ef57c3d78c6 115 SUPERFAMILY SSF81343 5 115 1.57E-30 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07895 2b7d326d75cd658e31698ef57c3d78c6 115 TIGRFAM TIGR02968 succ_dehyd_anc: succinate dehydrogenase, hydrophobic membrane anchor protein 10 113 2.4E-36 T 28-03-2018 IPR014312 Succinate dehydrogenase, hydrophobic membrane anchor GO:0000104|GO:0006099|GO:0016021|GO:0020037 CI104_RS07895 2b7d326d75cd658e31698ef57c3d78c6 115 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 11 104 1.6E-6 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 TIGRFAM TIGR00142 hycI: hydrogenase maturation peptidase HycI 3 146 1.8E-66 T 28-03-2018 IPR004420 Peptidase A31, hydrogenase maturation protease HycI GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 5 139 9.3E-36 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 SUPERFAMILY SSF53163 4 146 5.23E-35 T 28-03-2018 IPR023430 Peptidase HybD-like domain CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 Gene3D G3DSA:3.40.50.1450 3 153 1.2E-34 T 28-03-2018 IPR023430 Peptidase HybD-like domain CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 PRINTS PR00446 Hydrogen uptake protein signature 67 83 5.6E-14 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 PRINTS PR00446 Hydrogen uptake protein signature 33 50 5.6E-14 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 PRINTS PR00446 Hydrogen uptake protein signature 3 15 5.6E-14 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 PRINTS PR00446 Hydrogen uptake protein signature 15 26 5.6E-14 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 PRINTS PR00446 Hydrogen uptake protein signature 56 66 5.6E-14 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS19795 017ab53ce92e07ac28afddae682921be 154 Pfam PF01750 Hydrogenase maturation protease 23 138 9.3E-30 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04455 da47c6b11d93cdf3a645f45aabe37f23 228 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 225 4.6E-75 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS04455 da47c6b11d93cdf3a645f45aabe37f23 228 Gene3D G3DSA:3.40.1280.10 2 164 6.1E-33 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS04455 da47c6b11d93cdf3a645f45aabe37f23 228 PIRSF PIRSF004808 1 228 3.1E-61 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS04455 da47c6b11d93cdf3a645f45aabe37f23 228 SUPERFAMILY SSF75217 2 156 3.07E-30 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS04455 da47c6b11d93cdf3a645f45aabe37f23 228 Pfam PF00588 SpoU rRNA Methylase family 3 153 6.6E-32 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 Gene3D G3DSA:3.40.50.20 1 123 1.1E-51 T 28-03-2018 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 SUPERFAMILY SSF52440 1 113 1.22E-46 T 28-03-2018 IPR016185 Pre-ATP-grasp domain CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 SUPERFAMILY SSF51246 331 444 1.26E-43 T 28-03-2018 IPR011054 Rudiment single hybrid motif Reactome: R-HSA-196780 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 Pfam PF02785 Biotin carboxylase C-terminal domain 336 441 3.0E-38 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 Pfam PF00289 Biotin carboxylase, N-terminal domain 1 110 8.0E-44 T 28-03-2018 IPR005481 Biotin carboxylase-like, N-terminal domain Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 ProSitePatterns PS00866 Carbamoyl-phosphate synthase subdomain signature 1. 154 168 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 TIGRFAM TIGR00514 accC: acetyl-CoA carboxylase, biotin carboxylase subunit 1 447 3.9E-250 T 28-03-2018 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase GO:0016874 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 ProSitePatterns PS00867 Carbamoyl-phosphate synthase subdomain signature 2. 286 293 - T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 Pfam PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain 115 323 1.6E-85 T 28-03-2018 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain GO:0005524 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 Gene3D G3DSA:3.30.470.20 210 444 1.6E-96 T 28-03-2018 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 SMART SM00878 336 441 1.2E-64 T 28-03-2018 IPR005482 Biotin carboxylase, C-terminal Reactome: R-HSA-196780|Reactome: R-HSA-3371599 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 Gene3D G3DSA:3.30.1490.20 124 209 6.3E-20 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS02420 b197b02b62e49e893ba514aa7bf7156b 449 SUPERFAMILY SSF56059 83 347 1.75E-68 T 28-03-2018 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 Gene3D G3DSA:3.40.50.970 57 471 4.3E-84 T 28-03-2018 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 Gene3D G3DSA:3.40.50.920 707 887 1.3E-42 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 SUPERFAMILY SSF52518 58 469 1.36E-143 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 SUPERFAMILY SSF52922 702 885 9.64E-64 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 106 294 2.3E-9 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 TIGRFAM TIGR00759 aceE: pyruvate dehydrogenase (acetyl-transferring), homodimeric type 5 886 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 PIRSF PIRSF000156 1 887 0.0 T 28-03-2018 IPR004660 2-oxo-acid dehydrogenase E1 component homodimeric type GO:0016491|GO:0055114 KEGG: 00010+1.2.4.1|KEGG: 00020+1.2.4.1|KEGG: 00620+1.2.4.1 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 Gene3D G3DSA:3.40.50.970 472 706 5.3E-67 T 28-03-2018 CI104_RS05010 6fbb9407d68a8c5c3908600be7932c37 887 SUPERFAMILY SSF52518 474 701 2.47E-98 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS25705 60aa06ab8fa4e7f6b446840798010e49 121 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 16 119 5.5E-28 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25705 60aa06ab8fa4e7f6b446840798010e49 121 PIRSF PIRSF004761 11 121 5.2E-33 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25705 60aa06ab8fa4e7f6b446840798010e49 121 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 42 84 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CI104_RS25705 60aa06ab8fa4e7f6b446840798010e49 121 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 9 121 21.451 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25705 60aa06ab8fa4e7f6b446840798010e49 121 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 19 119 9.1E-34 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25675 60aa06ab8fa4e7f6b446840798010e49 121 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 16 119 5.5E-28 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25675 60aa06ab8fa4e7f6b446840798010e49 121 PIRSF PIRSF004761 11 121 5.2E-33 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25675 60aa06ab8fa4e7f6b446840798010e49 121 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 42 84 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CI104_RS25675 60aa06ab8fa4e7f6b446840798010e49 121 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 9 121 21.451 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS25675 60aa06ab8fa4e7f6b446840798010e49 121 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 19 119 9.1E-34 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 SUPERFAMILY SSF55021 248 343 1.04E-25 T 28-03-2018 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 TIGRFAM TIGR02314 ABC_MetN: D-methionine ABC transporter, ATP-binding protein 1 343 1.0E-205 T 28-03-2018 IPR012692 ABC transporter, methionine import, ATP-binding protein MetN, proteobacteria GO:0005524|GO:0009276|GO:0048473|GO:0048474 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 Pfam PF09383 NIL domain 268 339 1.1E-19 T 28-03-2018 IPR018449 NIL domain CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 SMART SM00930 265 340 3.0E-24 T 28-03-2018 IPR018449 NIL domain CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 SMART SM00382 30 218 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 Gene3D G3DSA:3.40.50.300 1 254 4.3E-77 T 28-03-2018 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 Gene3D G3DSA:3.30.70.260 255 343 3.3E-25 T 28-03-2018 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 Pfam PF00005 ABC transporter 21 169 6.7E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS05450 1b428837d7c98cea1df65fa7ef4b5f48 343 SUPERFAMILY SSF52540 1 240 5.32E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13090 462235a664a2692bc27a3dd9e583cf35 297 Gene3D G3DSA:1.10.3720.10 11 283 1.3E-40 T 28-03-2018 CI104_RS13090 462235a664a2692bc27a3dd9e583cf35 297 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 292 7.0E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13090 462235a664a2692bc27a3dd9e583cf35 297 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 20 70 6.6E-8 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CI104_RS13090 462235a664a2692bc27a3dd9e583cf35 297 SUPERFAMILY SSF161098 89 275 5.36E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 6 355 1.1E-138 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 ProSitePatterns PS00470 Isocitrate and isopropylmalate dehydrogenases signature. 247 266 - T 28-03-2018 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site GO:0000287|GO:0016616|GO:0051287|GO:0055114 Reactome: R-HSA-71403 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 SUPERFAMILY SSF53659 2 360 6.12E-123 T 28-03-2018 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 Gene3D G3DSA:3.40.718.10 1 363 2.3E-132 T 28-03-2018 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 SMART SM01329 6 355 8.9E-201 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 TIGRFAM TIGR00169 leuB: 3-isopropylmalate dehydrogenase 6 354 4.4E-171 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CI104_RS04825 28495f09fa20249e83c287367b5a580c 363 Hamap MF_01033 3-isopropylmalate dehydrogenase [leuB]. 5 359 51.6 T 28-03-2018 IPR004429 Isopropylmalate dehydrogenase GO:0003862|GO:0005737|GO:0009098|GO:0055114 KEGG: 00290+1.1.1.85|KEGG: 00660+1.1.1.85|MetaCyc: PWY-7396 CI104_RS21345 b7737641e42131d76a2c55f3658993ce 323 SUPERFAMILY SSF53850 131 212 6.22E-5 T 28-03-2018 CI104_RS21345 b7737641e42131d76a2c55f3658993ce 323 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 33 306 1.6E-65 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CI104_RS21345 b7737641e42131d76a2c55f3658993ce 323 Gene3D G3DSA:3.40.190.10 142 232 2.1E-4 T 28-03-2018 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 TIGRFAM TIGR01062 parC_Gneg: DNA topoisomerase IV, A subunit 5 737 0.0 T 28-03-2018 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Pfam PF00521 DNA gyrase/topoisomerase IV, subunit A 29 465 8.5E-135 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 SUPERFAMILY SSF56719 28 479 7.19E-154 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Gene3D G3DSA:2.120.10.90 492 737 1.5E-44 T 28-03-2018 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Gene3D G3DSA:1.10.268.10 341 480 3.7E-46 T 28-03-2018 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Gene3D G3DSA:3.30.1360.40 235 328 1.8E-23 T 28-03-2018 IPR024946 Arginine repressor C-terminal-like domain Reactome: R-HSA-4615885 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Hamap MF_00936 DNA topoisomerase 4 subunit A [parC]. 1 738 34.241 T 28-03-2018 IPR005742 DNA topoisomerase IV, subunit A, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 641 675 2.0E-8 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Pfam PF03989 DNA gyrase C-terminal domain, beta-propeller 593 631 1.0E-4 T 28-03-2018 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal repeat GO:0003677|GO:0003916|GO:0005524|GO:0005694|GO:0006265 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 Gene3D G3DSA:3.90.199.10 31 212 1.9E-74 T 28-03-2018 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta GO:0003677|GO:0003918|GO:0005524|GO:0006259|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 SMART SM00434 8 458 6.7E-240 T 28-03-2018 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03910 8c6eff2a2db43530d64236b78508db83 752 SUPERFAMILY SSF101904 494 735 3.4E-51 T 28-03-2018 IPR035516 DNA gyrase/topoisomerase IV, subunit A, C-terminal CI104_RS07465 f3f073de3682925b46c5f299afaace83 461 Pfam PF03606 C4-dicarboxylate anaerobic carrier 6 451 2.6E-134 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CI104_RS07465 f3f073de3682925b46c5f299afaace83 461 TIGRFAM TIGR00771 DcuC: transporter, anaerobic C4-dicarboxylate uptake C (DcuC) family 58 441 7.4E-190 T 28-03-2018 IPR004669 C4-dicarboxylate anaerobic carrier GO:0015556|GO:0015740|GO:0016021 CI104_RS04580 677bd550f4e0cec576d189dd14fb76b6 272 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 6 270 1.3E-87 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS22445 212990357fa7710a60dc017e05a63989 216 Gene3D G3DSA:3.20.20.70 1 216 1.2E-25 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS22445 212990357fa7710a60dc017e05a63989 216 Pfam PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family 5 206 5.6E-26 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS22445 212990357fa7710a60dc017e05a63989 216 SUPERFAMILY SSF51366 2 215 4.12E-40 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS22445 212990357fa7710a60dc017e05a63989 216 SMART SM00934 5 207 4.7E-34 T 28-03-2018 IPR001754 Orotidine 5'-phosphate decarboxylase domain GO:0004590|GO:0006207 KEGG: 00240+4.1.1.23|MetaCyc: PWY-5686|MetaCyc: PWY-7790|MetaCyc: PWY-7791|Reactome: R-HSA-500753 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 Gene3D G3DSA:2.40.30.10 240 329 1.5E-22 T 28-03-2018 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 TIGRFAM TIGR02034 CysN: sulfate adenylyltransferase, large subunit 28 434 4.9E-213 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 SUPERFAMILY SSF50465 336 435 4.27E-30 T 28-03-2018 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 Pfam PF00009 Elongation factor Tu GTP binding domain 27 232 8.4E-44 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 34 214 2.1E-14 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 PRINTS PR00315 GTP-binding elongation factor signature 163 172 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 PRINTS PR00315 GTP-binding elongation factor signature 126 137 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 PRINTS PR00315 GTP-binding elongation factor signature 110 120 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 PRINTS PR00315 GTP-binding elongation factor signature 29 42 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 PRINTS PR00315 GTP-binding elongation factor signature 90 98 7.0E-14 T 28-03-2018 IPR000795 Transcription factor, GTP-binding domain GO:0003924|GO:0005525 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 SUPERFAMILY SSF50447 243 328 7.73E-24 T 28-03-2018 IPR009000 Translation protein, beta-barrel domain CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 Hamap MF_00062 Sulfate adenylyltransferase subunit 1 [cysN]. 19 475 54.068 T 28-03-2018 IPR011779 Sulphate adenylyltransferase, large subunit GO:0006790 KEGG: 00230+2.7.7.4|KEGG: 00261+2.7.7.4|KEGG: 00450+2.7.7.4|KEGG: 00920+2.7.7.4|MetaCyc: PWY-5278|MetaCyc: PWY-5340|MetaCyc: PWY-6683|MetaCyc: PWY-6932 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 Gene3D G3DSA:3.40.50.300 6 239 2.3E-39 T 28-03-2018 CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 ProSitePatterns PS00301 Translational (tr)-type guanine nucleotide-binding (G) domain signature. 83 98 - T 28-03-2018 IPR031157 Tr-type G domain, conserved site CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 SUPERFAMILY SSF52540 24 252 1.72E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19970 10b60e63c8e60e5b6effc1f70b3a69de 475 Gene3D G3DSA:2.40.30.10 332 436 2.2E-19 T 28-03-2018 CI104_RS22180 e4d00ae642c65bbfa86535155050ed12 120 Gene3D G3DSA:3.40.1400.10 13 118 4.2E-4 T 28-03-2018 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family GO:0005975|GO:0016853 KEGG: 00052+5.3.1.26 CI104_RS22180 e4d00ae642c65bbfa86535155050ed12 120 Pfam PF14272 Glycine-rich SFCGS 4 117 3.9E-60 T 28-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CI104_RS22180 e4d00ae642c65bbfa86535155050ed12 120 TIGRFAM TIGR03577 EF_0830: conserved hypothetical protein EF_0830/AHA_3911 4 118 2.5E-68 T 28-03-2018 IPR020034 Conserved hypothetical protein CHP03577, EF0830/AHA3911 CI104_RS13130 b2ff24622bd3a477138f66d4209fc8fc 94 Pfam PF01381 Helix-turn-helix 13 65 2.3E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13130 b2ff24622bd3a477138f66d4209fc8fc 94 Gene3D G3DSA:1.10.260.40 1 82 5.8E-14 T 28-03-2018 CI104_RS13130 b2ff24622bd3a477138f66d4209fc8fc 94 TIGRFAM TIGR02607 antidote_HigA: addiction module antidote protein, HigA family 3 81 3.1E-27 T 28-03-2018 IPR013430 Toxin-antitoxin system, antidote protein, HigA GO:0003677 CI104_RS13130 b2ff24622bd3a477138f66d4209fc8fc 94 SMART SM00530 12 67 2.8E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS13130 b2ff24622bd3a477138f66d4209fc8fc 94 SUPERFAMILY SSF47413 9 88 7.11E-24 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS22455 0d9e8ba895abe0c7cd411ab4f94c4c9f 101 SUPERFAMILY SSF52794 3 95 1.44E-17 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS22455 0d9e8ba895abe0c7cd411ab4f94c4c9f 101 Gene3D G3DSA:3.40.50.2300 1 97 1.7E-17 T 28-03-2018 CI104_RS22455 0d9e8ba895abe0c7cd411ab4f94c4c9f 101 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 4 79 8.7E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SMART SM00564 479 512 610.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SMART SM00564 715 748 0.04 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SMART SM00564 220 251 3.2E-6 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SMART SM00564 401 458 310.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SMART SM00564 282 314 69.0 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SMART SM00564 339 380 0.012 T 28-03-2018 IPR018391 Pyrrolo-quinoline quinone beta-propeller repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SUPERFAMILY SSF50998 557 792 5.49E-158 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 SUPERFAMILY SSF50998 162 521 5.49E-158 T 28-03-2018 IPR011047 Quinoprotein alcohol dehydrogenase-like superfamily CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 ProSitePatterns PS00363 Bacterial quinoprotein dehydrogenases signature 1. 167 195 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Pfam PF01011 PQQ enzyme repeat 442 468 1.3E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Pfam PF01011 PQQ enzyme repeat 664 696 1.8E-7 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Pfam PF01011 PQQ enzyme repeat 721 758 4.0E-6 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Pfam PF01011 PQQ enzyme repeat 225 260 3.7E-8 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Pfam PF01011 PQQ enzyme repeat 289 320 2.9E-5 T 28-03-2018 IPR002372 Pyrrolo-quinoline quinone repeat CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 TIGRFAM TIGR03074 PQQ_membr_DH: membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family 15 792 0.0 T 28-03-2018 IPR017511 PQQ-dependent membrane bound dehydrogenase GO:0016021|GO:0016614|GO:0048038|GO:0055114 CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 ProSitePatterns PS00364 Bacterial quinoprotein dehydrogenases signature 2. 404 425 - T 28-03-2018 IPR001479 Quinoprotein dehydrogenase, conserved site GO:0030288|GO:0055114 CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Gene3D G3DSA:2.140.10.10 667 791 1.5E-13 T 28-03-2018 CI104_RS05100 8a5b432e8eddab07dadd0b5ff89e99c6 796 Gene3D G3DSA:2.140.10.10 158 607 3.1E-85 T 28-03-2018 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 Gene3D G3DSA:2.40.50.140 289 341 5.8E-14 T 28-03-2018 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 Gene3D G3DSA:3.40.50.300 2 239 5.2E-67 T 28-03-2018 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 Pfam PF08402 TOBE domain 278 348 1.6E-8 T 28-03-2018 IPR013611 Transport-associated OB, type 2 GO:0005215|GO:0005524|GO:0006810|GO:0016820|GO:0043190 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 Pfam PF00005 ABC transporter 21 162 1.7E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 Gene3D G3DSA:2.40.50.100 240 288 2.1E-11 T 28-03-2018 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 SUPERFAMILY SSF52540 4 243 2.66E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 SUPERFAMILY SSF50331 237 355 1.17E-28 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01485 14ff153a38df367c0990ec98f38bd849 356 SMART SM00382 29 326 9.5E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 Gene3D G3DSA:1.10.10.10 65 135 0.18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 SUPERFAMILY SSF46689 11 120 5.38E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 SUPERFAMILY SSF53098 137 293 6.37E-21 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 Pfam PF00665 Integrase core domain 143 262 1.3E-9 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 Gene3D G3DSA:3.30.420.10 136 298 1.2E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 Gene3D G3DSA:1.10.10.10 7 64 1.9E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25875 ac644970d39e9dad0005a2a2936b7194 446 Pfam PF13518 Helix-turn-helix domain 15 66 4.8E-12 T 28-03-2018 CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 Pfam PF05195 Aminopeptidase P, N-terminal domain 6 126 3.0E-35 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 ProSitePatterns PS00491 Aminopeptidase P and proline dipeptidase signature. 348 360 - T 28-03-2018 IPR001131 Peptidase M24B, X-Pro dipeptidase/aminopeptidase P, conserved site CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 SUPERFAMILY SSF53092 2 174 2.09E-52 T 28-03-2018 IPR028980 Creatinase/Aminopeptidase P, N-terminal CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 Gene3D G3DSA:3.40.350.10 1 171 2.9E-47 T 28-03-2018 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 SMART SM01011 1 136 1.6E-57 T 28-03-2018 IPR007865 Aminopeptidase P, N-terminal GO:0004177|GO:0030145 CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 SUPERFAMILY SSF55920 175 433 1.44E-88 T 28-03-2018 IPR000994 Peptidase M24 CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 Gene3D G3DSA:3.90.230.10 172 437 2.0E-89 T 28-03-2018 CI104_RS21090 f2d3877655f2fd119e1babd00120396e 437 Pfam PF00557 Metallopeptidase family M24 181 411 3.0E-66 T 28-03-2018 IPR000994 Peptidase M24 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 SUPERFAMILY SSF53163 1 158 1.03E-46 T 28-03-2018 IPR023430 Peptidase HybD-like domain CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 PRINTS PR00446 Hydrogen uptake protein signature 56 66 7.7E-24 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 PRINTS PR00446 Hydrogen uptake protein signature 3 15 7.7E-24 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 PRINTS PR00446 Hydrogen uptake protein signature 35 52 7.7E-24 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 PRINTS PR00446 Hydrogen uptake protein signature 15 26 7.7E-24 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 PRINTS PR00446 Hydrogen uptake protein signature 68 84 7.7E-24 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 Gene3D G3DSA:3.40.50.1450 1 162 2.8E-56 T 28-03-2018 IPR023430 Peptidase HybD-like domain CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 TIGRFAM TIGR00140 hupD: hydrogenase expression/formation protein 3 153 2.0E-54 T 28-03-2018 IPR004419 Peptidase A31, hydrogenase expression/formation protein GO:0016485|GO:0046872 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 Pfam PF01750 Hydrogenase maturation protease 20 147 4.6E-37 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS04040 12919db16e290076b0dd2a8b551d2e35 164 TIGRFAM TIGR00072 hydrog_prot: hydrogenase maturation protease 4 148 1.6E-46 T 28-03-2018 IPR000671 Peptidase A31 family GO:0008047|GO:0008233 CI104_RS15110 46332b841ca7887d1a8b35cd69c4b80b 532 SMART SM00052 265 506 7.4E-108 T 28-03-2018 IPR001633 EAL domain CI104_RS15110 46332b841ca7887d1a8b35cd69c4b80b 532 Pfam PF00563 EAL domain 273 501 1.7E-61 T 28-03-2018 IPR001633 EAL domain CI104_RS15110 46332b841ca7887d1a8b35cd69c4b80b 532 Gene3D G3DSA:3.20.20.450 261 515 3.0E-75 T 28-03-2018 IPR001633 EAL domain CI104_RS15110 46332b841ca7887d1a8b35cd69c4b80b 532 SUPERFAMILY SSF141868 272 514 3.14E-73 T 28-03-2018 IPR001633 EAL domain CI104_RS15110 46332b841ca7887d1a8b35cd69c4b80b 532 Pfam PF12792 CSS motif domain associated with EAL 43 235 2.5E-38 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 Gene3D G3DSA:3.40.50.20 1 114 1.4E-32 T 28-03-2018 CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 Hamap MF_01552 Ribosomal protein S6--L-glutamate ligase [rimK]. 1 295 54.383 T 28-03-2018 IPR023533 Ribosomal protein S6--L-glutamate ligase RimK CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 Gene3D G3DSA:3.30.470.20 171 277 1.8E-34 T 28-03-2018 CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 TIGRFAM TIGR00768 rimK_fam: alpha-L-glutamate ligase, RimK family 2 286 4.0E-95 T 28-03-2018 IPR004666 Ribosomal S6 modification enzyme RimK/Lysine biosynthesis enzyme LysX GO:0006464 Reactome: R-HSA-70614 CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 Gene3D G3DSA:3.30.1490.20 115 170 2.3E-12 T 28-03-2018 IPR013815 ATP-grasp fold, subdomain 1 GO:0003824|GO:0005524 CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 SUPERFAMILY SSF56059 98 288 3.89E-50 T 28-03-2018 CI104_RS08700 142931030844df7703cf93f73c0c8a94 300 Pfam PF08443 RimK-like ATP-grasp domain 97 286 2.1E-80 T 28-03-2018 IPR013651 ATP-grasp fold, RimK-type Reactome: R-HSA-70614 CI104_RS04785 f4efb9e964114deb22e12c1fe85dc949 233 Gene3D G3DSA:3.40.50.300 3 229 1.9E-59 T 28-03-2018 CI104_RS04785 f4efb9e964114deb22e12c1fe85dc949 233 SMART SM00382 24 209 8.1E-20 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS04785 f4efb9e964114deb22e12c1fe85dc949 233 SUPERFAMILY SSF52540 1 222 4.71E-65 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04785 f4efb9e964114deb22e12c1fe85dc949 233 TIGRFAM TIGR01277 thiQ: thiamine ABC transporter, ATP-binding protein 2 214 2.9E-111 T 28-03-2018 IPR005968 Thiamine ABC transporter, ATP-binding protein ThiQ GO:0005524|GO:0006810|GO:0016021|GO:0042626 CI104_RS04785 f4efb9e964114deb22e12c1fe85dc949 233 Pfam PF00005 ABC transporter 18 157 3.2E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS04785 f4efb9e964114deb22e12c1fe85dc949 233 ProSitePatterns PS00211 ABC transporters family signature. 130 144 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS27330 8bcfe5dacbb638fb622b8d3683621099 48 ProSitePatterns PS00397 Site-specific recombinases active site. 8 16 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS27330 8bcfe5dacbb638fb622b8d3683621099 48 Pfam PF00239 Resolvase, N terminal domain 5 48 1.2E-9 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27330 8bcfe5dacbb638fb622b8d3683621099 48 Gene3D G3DSA:3.40.50.1390 2 48 2.0E-13 T 28-03-2018 CI104_RS27330 8bcfe5dacbb638fb622b8d3683621099 48 SUPERFAMILY SSF53041 4 48 4.45E-11 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 SUPERFAMILY SSF53383 101 559 5.6E-122 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Gene3D G3DSA:3.40.50.220 3 100 1.4E-23 T 28-03-2018 IPR027464 Ornithine decarboxylase, N-terminal domain KEGG: 00330+4.1.1.17|KEGG: 00480+4.1.1.17|MetaCyc: PWY-46|MetaCyc: PWY-6305 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 342 356 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 PIRSF PIRSF009393 1 711 1.5E-285 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 568 697 6.8E-47 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 SUPERFAMILY SSF55904 563 711 2.75E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Gene3D G3DSA:3.90.100.10 593 711 9.7E-35 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Gene3D G3DSA:3.90.1150.10 413 592 3.2E-54 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 4 80 3.1E-14 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 101 542 1.1E-199 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 SUPERFAMILY SSF52172 1 100 2.34E-25 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS04125 7249962729aeeb841e3ba5929b90f680 711 Gene3D G3DSA:3.40.640.10 101 412 1.3E-35 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS13645 0e4d1a5e9ef011216b491316f5ef1115 136 SUPERFAMILY SSF51316 1 123 1.88E-30 T 28-03-2018 IPR011057 Mss4-like CI104_RS13645 0e4d1a5e9ef011216b491316f5ef1115 136 Gene3D G3DSA:3.90.1590.10 2 119 5.5E-21 T 28-03-2018 CI104_RS13645 0e4d1a5e9ef011216b491316f5ef1115 136 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 29 106 3.0E-8 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CI104_RS28295 91a25b600485497f357a93420e34e5c1 122 Pfam PF05513 TraA 1 120 2.2E-70 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CI104_RS28295 91a25b600485497f357a93420e34e5c1 122 TIGRFAM TIGR02758 TraA_TIGR: type IV conjugative transfer system pilin TraA 26 122 1.0E-31 T 28-03-2018 IPR008873 TraA GO:0000746|GO:0005576 CI104_RS07390 6b921c56788b74d8256e1c6e38410bb0 142 SUPERFAMILY SSF52402 1 142 9.21E-26 T 28-03-2018 CI104_RS07390 6b921c56788b74d8256e1c6e38410bb0 142 Gene3D G3DSA:3.40.50.620 2 142 1.9E-25 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07390 6b921c56788b74d8256e1c6e38410bb0 142 PRINTS PR01438 Universal stress protein signature 120 142 2.4E-14 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS07390 6b921c56788b74d8256e1c6e38410bb0 142 PRINTS PR01438 Universal stress protein signature 103 115 2.4E-14 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS07390 6b921c56788b74d8256e1c6e38410bb0 142 PRINTS PR01438 Universal stress protein signature 2 20 2.4E-14 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS07390 6b921c56788b74d8256e1c6e38410bb0 142 Pfam PF00582 Universal stress protein family 1 142 1.4E-24 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS14075 d5273a1859944499c2b40c1764366bf3 102 Hamap MF_01948 Lipopolysaccharide assembly protein A [lapA]. 1 94 22.751 T 28-03-2018 IPR032906 Lipopolysaccharide assembly protein A GO:0005886|GO:0008653 CI104_RS14075 d5273a1859944499c2b40c1764366bf3 102 Pfam PF06305 Lipopolysaccharide assembly protein A domain 23 85 1.4E-20 T 28-03-2018 IPR010445 Lipopolysaccharide assembly protein A domain GO:0005887 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 SUPERFAMILY SSF46785 3 87 4.75E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 SUPERFAMILY SSF53850 93 295 2.33E-41 T 28-03-2018 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 Gene3D G3DSA:3.40.190.10 92 178 5.8E-17 T 28-03-2018 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 8 67 1.2E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 Gene3D G3DSA:3.40.190.10 179 263 1.9E-19 T 28-03-2018 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 44 55 3.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 34 44 3.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 23 34 3.4E-10 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 Gene3D G3DSA:1.10.10.10 4 91 3.3E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20250 1672dafbe0eaef81f7156d7cfc21d976 305 Pfam PF03466 LysR substrate binding domain 91 292 1.3E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 Pfam PF01521 Iron-sulphur cluster biosynthesis 1 103 3.9E-26 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 Gene3D G3DSA:2.60.300.12 2 107 8.8E-38 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 SUPERFAMILY SSF89360 1 96 2.75E-32 T 28-03-2018 IPR000361 FeS cluster biogenesis Reactome: R-HSA-1362409 CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 Hamap MF_01429 Iron-binding protein IscA [iscA]. 1 107 45.262 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 ProSitePatterns PS01152 Hypothetical hesB/yadR/yfhF family signature. 88 105 - T 28-03-2018 IPR017870 FeS cluster insertion, C-terminal, conserved site Reactome: R-HSA-1362409 CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 TIGRFAM TIGR02011 IscA: iron-sulfur cluster assembly protein IscA 3 107 1.9E-61 T 28-03-2018 IPR011302 Iron-binding protein IscA, proteobacteria GO:0005506|GO:0051536|GO:0097428 CI104_RS18610 bd410dade68c3f67eaa9204cf2817a2e 107 TIGRFAM TIGR00049 TIGR00049: iron-sulfur cluster assembly accessory protein 3 107 8.2E-38 T 28-03-2018 IPR016092 FeS cluster insertion protein GO:0005198|GO:0051536|GO:0097428 Reactome: R-HSA-1362409 CI104_RS08725 ec2518041e5e842d7fd9416f80432bb8 281 Gene3D G3DSA:1.10.3720.10 11 273 4.8E-42 T 28-03-2018 CI104_RS08725 ec2518041e5e842d7fd9416f80432bb8 281 SUPERFAMILY SSF161098 8 266 5.14E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08725 ec2518041e5e842d7fd9416f80432bb8 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 81 266 5.9E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS20790 ef54a5491ec0e1db8f437b6e3fb140dc 53 Pfam PF13978 Protein of unknown function (DUF4223) 1 51 3.9E-27 T 28-03-2018 IPR025318 Protein of unknown function DUF4223 CI104_RS10395 a2de5edb0e2ad0d28d16d5f8aa5d3ed1 307 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 4 121 8.5E-27 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS10395 a2de5edb0e2ad0d28d16d5f8aa5d3ed1 307 Gene3D G3DSA:3.40.50.720 1 128 3.8E-34 T 28-03-2018 CI104_RS10395 a2de5edb0e2ad0d28d16d5f8aa5d3ed1 307 SUPERFAMILY SSF51735 4 134 1.83E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS10395 a2de5edb0e2ad0d28d16d5f8aa5d3ed1 307 Gene3D G3DSA:3.30.360.10 129 307 1.2E-21 T 28-03-2018 CI104_RS10395 a2de5edb0e2ad0d28d16d5f8aa5d3ed1 307 SUPERFAMILY SSF55347 126 265 3.53E-45 T 28-03-2018 CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 SUPERFAMILY SSF53613 4 297 8.89E-64 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 38 62 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 Gene3D G3DSA:3.40.1190.20 46 309 1.4E-46 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 Pfam PF00294 pfkB family carbohydrate kinase 12 296 4.0E-65 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 TIGRFAM TIGR03168 1-PFK: hexose kinase, 1-phosphofructokinase family 4 305 2.8E-96 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 Gene3D G3DSA:2.20.150.10 11 45 1.2E-6 T 28-03-2018 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CI104_RS11910 c871f8f6e8d65c0048e771f772ceaa80 310 PIRSF PIRSF000535 1 310 2.2E-110 T 28-03-2018 IPR017583 Tagatose/fructose phosphokinase GO:0005975|GO:0016773 CI104_RS27765 45f967df88ef72e580d36a6f78bebf4d 464 Pfam PF03743 Bacterial conjugation TrbI-like protein 208 404 9.9E-30 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CI104_RS27765 45f967df88ef72e580d36a6f78bebf4d 464 Gene3D G3DSA:1.20.5.1000 65 126 1.2E-4 T 28-03-2018 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 SMART SM01185 69 125 1.9E-14 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Gene3D G3DSA:2.40.50.140 133 188 4.4E-21 T 28-03-2018 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 SMART SM00841 133 188 3.1E-27 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Gene3D G3DSA:2.40.50.140 66 131 1.1E-15 T 28-03-2018 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Pfam PF09285 Elongation factor P, C-terminal 133 188 4.5E-19 T 28-03-2018 IPR015365 Elongation factor P, C-terminal GO:0005737|GO:0043043 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 PIRSF PIRSF005901 1 190 2.1E-60 T 28-03-2018 IPR020599 Translation elongation factor P/YeiP CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Gene3D G3DSA:2.30.30.30 2 63 3.6E-16 T 28-03-2018 IPR014722 Ribosomal protein L2 domain 2 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 SUPERFAMILY SSF50249 132 189 7.37E-15 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 ProSitePatterns PS01275 Elongation factor P signature. 154 173 - T 28-03-2018 IPR013852 Translation elongation factor P/YeiP, conserved site CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Pfam PF08207 Elongation factor P (EF-P) KOW-like domain 4 62 8.6E-17 T 28-03-2018 IPR013185 Translation elongation factor, KOW-like CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Pfam PF01132 Elongation factor P (EF-P) OB domain 72 124 5.8E-14 T 28-03-2018 IPR001059 Translation elongation factor P/YeiP, central GO:0003746|GO:0006414 CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 SUPERFAMILY SSF50104 1 65 2.35E-11 T 28-03-2018 IPR008991 Translation protein SH3-like domain CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 SUPERFAMILY SSF50249 67 130 1.24E-11 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 TIGRFAM TIGR02178 yeiP: elongation factor P-like protein YeiP 3 189 2.2E-101 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP CI104_RS16980 711ac5645e7d263badd10ddf17c1ea72 190 Hamap MF_00646 Elongation factor P-like protein [yeiP]. 2 189 43.442 T 28-03-2018 IPR011897 Translation elongation factor P-like, YeiP CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 PIRSF PIRSF001359 13 359 1.8E-106 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 Pfam PF01116 Fructose-bisphosphate aldolase class-II 17 355 6.3E-89 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 TIGRFAM TIGR01520 FruBisAldo_II_A: fructose-bisphosphate aldolase, class II 4 358 9.7E-193 T 28-03-2018 IPR006411 Fructose-bisphosphate aldolase, class II, yeast/E. coli subtype GO:0004332|GO:0006096 KEGG: 00010+4.1.2.13|KEGG: 00030+4.1.2.13|KEGG: 00051+4.1.2.13|KEGG: 00680+4.1.2.13|KEGG: 00710+4.1.2.13|MetaCyc: PWY-1042|MetaCyc: PWY-1861|MetaCyc: PWY-5484|MetaCyc: PWY-6142|MetaCyc: PWY-7385 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 14 357 1.8E-117 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 ProSitePatterns PS00602 Fructose-bisphosphate aldolase class-II signature 1. 101 112 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 SUPERFAMILY SSF51569 4 357 1.23E-131 T 28-03-2018 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 ProSitePatterns PS00806 Fructose-bisphosphate aldolase class-II signature 2. 172 183 - T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS04345 d7a2c5fe26154d217cdb24949bd50a7c 359 Gene3D G3DSA:3.20.20.70 4 358 5.1E-100 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS12735 19a10021cb7c87fd4c57632e47be9a6e 236 ProDom PD120112 LIPOPROTEIN YNFC MEMBRANE UPF0257 PRECURSOR PALMITATE SIGNAL INNER 1 236 5.0E-106 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CI104_RS12735 19a10021cb7c87fd4c57632e47be9a6e 236 Pfam PF06788 Uncharacterised protein family (UPF0257) 1 236 2.2E-123 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CI104_RS12735 19a10021cb7c87fd4c57632e47be9a6e 236 Hamap MF_01065 UPF0257 lipoprotein YnfC [ynfC]. 2 236 40.087 T 28-03-2018 IPR010646 Uncharacterised protein family UPF0257 GO:0005886 CI104_RS12545 da47b2511e5ba9d084680ff62c5262e4 333 Pfam PF00962 Adenosine/AMP deaminase 6 328 1.1E-99 T 28-03-2018 IPR001365 Adenosine/AMP deaminase domain GO:0019239 Reactome: R-HSA-74217 CI104_RS12545 da47b2511e5ba9d084680ff62c5262e4 333 ProSitePatterns PS00485 Adenosine and AMP deaminase signature. 274 280 - T 28-03-2018 IPR006650 Adenosine/AMP deaminase active site GO:0009168|GO:0019239 Reactome: R-HSA-74217 CI104_RS12545 da47b2511e5ba9d084680ff62c5262e4 333 Gene3D G3DSA:3.20.20.140 4 333 2.5E-71 T 28-03-2018 CI104_RS12545 da47b2511e5ba9d084680ff62c5262e4 333 Hamap MF_00540 Adenosine deaminase [add]. 1 331 52.874 T 28-03-2018 IPR028893 Adenosine deaminase GO:0004000|GO:0009168 KEGG: 00230+3.5.4.4|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-74217 CI104_RS12545 da47b2511e5ba9d084680ff62c5262e4 333 SUPERFAMILY SSF51556 5 326 6.01E-74 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS12545 da47b2511e5ba9d084680ff62c5262e4 333 TIGRFAM TIGR01430 aden_deam: adenosine deaminase 6 330 2.2E-106 T 28-03-2018 IPR006330 Adenosine/adenine deaminase GO:0019239 Reactome: R-HSA-74217 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 SMART SM00342 181 263 3.9E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 Gene3D G3DSA:1.10.10.60 221 266 1.4E-12 T 28-03-2018 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 Gene3D G3DSA:1.10.10.60 173 220 2.6E-9 T 28-03-2018 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 SUPERFAMILY SSF46689 164 215 3.49E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 SUPERFAMILY SSF46689 218 265 2.96E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 Gene3D G3DSA:2.60.120.280 5 172 3.1E-8 T 28-03-2018 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 SUPERFAMILY SSF51215 19 147 4.97E-14 T 28-03-2018 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 Pfam PF02311 AraC-like ligand binding domain 24 144 6.8E-19 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS15675 b19528bd7eb601782910b92d6fc39e0c 268 Pfam PF12833 Helix-turn-helix domain 187 264 6.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS19885 cc301b4293b40b58b9f912beed3b7940 285 Pfam PF00950 ABC 3 transport family 10 264 8.6E-85 T 28-03-2018 IPR001626 ABC transporter, TroCD-like GO:0005887|GO:0042626|GO:0043190|GO:0055085 CI104_RS19885 cc301b4293b40b58b9f912beed3b7940 285 Gene3D G3DSA:1.10.3470.10 3 272 2.9E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS19885 cc301b4293b40b58b9f912beed3b7940 285 SUPERFAMILY SSF81345 3 260 5.36E-40 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS00440 14505f0051753650a2a266589b4253c7 401 TIGRFAM TIGR00210 gltS: sodium/glutamate symporter 2 397 5.6E-199 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CI104_RS00440 14505f0051753650a2a266589b4253c7 401 Pfam PF03616 Sodium/glutamate symporter 2 366 5.3E-161 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CI104_RS00440 14505f0051753650a2a266589b4253c7 401 Hamap MF_02062 Sodium/glutamate symporter [gltS]. 2 397 24.664 T 28-03-2018 IPR004445 Sodium/glutamate symport carrier protein GltS GO:0015501|GO:0015813|GO:0016021 CI104_RS27175 1a689321077086026c9da9faa78fc092 246 Pfam PF00589 Phage integrase family 44 216 1.5E-27 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS27175 1a689321077086026c9da9faa78fc092 246 Gene3D G3DSA:1.10.443.10 43 224 5.0E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS27175 1a689321077086026c9da9faa78fc092 246 PIRSF PIRSF004576 1 241 6.3E-113 T 28-03-2018 IPR016423 Resolvase, Rsv CI104_RS27175 1a689321077086026c9da9faa78fc092 246 SUPERFAMILY SSF56349 47 217 1.5E-26 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS03630 088d6dee0cc856f3a5b5c7fbdb7d70bb 366 SUPERFAMILY SSF69279 15 188 1.28E-29 T 28-03-2018 CI104_RS03630 088d6dee0cc856f3a5b5c7fbdb7d70bb 366 Gene3D G3DSA:3.55.50.10 112 224 4.6E-8 T 28-03-2018 CI104_RS03630 088d6dee0cc856f3a5b5c7fbdb7d70bb 366 Pfam PF05954 Phage late control gene D protein (GPD) 91 345 1.1E-35 T 28-03-2018 CI104_RS10910 472d208c2cc8537e131e62ef382751df 350 Pfam PF01757 Acyltransferase family 7 323 1.1E-21 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 SUPERFAMILY SSF47413 5 57 4.5E-9 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 SMART SM00354 4 69 9.3E-5 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 SUPERFAMILY SSF53822 75 321 2.01E-36 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 Gene3D G3DSA:1.10.260.40 4 68 5.7E-11 T 28-03-2018 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 Pfam PF00356 Bacterial regulatory proteins, lacI family 6 47 1.5E-8 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 Gene3D G3DSA:3.40.50.2300 69 176 3.8E-19 T 28-03-2018 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 Gene3D G3DSA:3.40.50.2300 177 323 6.0E-24 T 28-03-2018 CI104_RS22305 220df3598536a1dfd56c0d898c19b85e 351 Pfam PF13377 Periplasmic binding protein-like domain 172 329 1.4E-17 T 28-03-2018 CI104_RS15825 bbb17ab6c9136d368e4b88b1603450b3 137 Pfam PF13987 YedD-like protein 25 129 1.1E-54 T 28-03-2018 IPR025596 YedD-like protein CI104_RS22550 de299bf37e372a56c93dcd9a17d7dd3c 443 SMART SM00646 253 412 3.9E-76 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CI104_RS22550 de299bf37e372a56c93dcd9a17d7dd3c 443 Gene3D G3DSA:3.40.630.40 188 420 1.3E-58 T 28-03-2018 CI104_RS22550 de299bf37e372a56c93dcd9a17d7dd3c 443 Pfam PF01520 N-acetylmuramoyl-L-alanine amidase 193 412 5.8E-49 T 28-03-2018 IPR002508 N-acetylmuramoyl-L-alanine amidase, catalytic domain GO:0008745|GO:0009253 CI104_RS22550 de299bf37e372a56c93dcd9a17d7dd3c 443 SUPERFAMILY SSF53187 339 416 1.66E-53 T 28-03-2018 CI104_RS22550 de299bf37e372a56c93dcd9a17d7dd3c 443 SUPERFAMILY SSF53187 191 287 1.66E-53 T 28-03-2018 CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 SMART SM00877 95 173 9.8E-28 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 SMART SM00877 3 77 3.2E-28 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 PIRSF PIRSF034834 1 183 2.5E-82 T 28-03-2018 IPR011238 Polyhedral organelle shell protein PduT CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 1 66 9.0E-28 T 28-03-2018 CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 ProDom PD003442 UTILIZATION MICROCOMPARTMENTS PROPANEDIOL CONCENTRATING CARBON DIOXIDE MECHANISM CARBOXYSOME ETHANOLAMINE SHELL 95 158 8.0E-29 T 28-03-2018 CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 SUPERFAMILY SSF143414 95 181 4.97E-23 T 28-03-2018 CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 Pfam PF00936 BMC domain 4 76 1.5E-22 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 Pfam PF00936 BMC domain 96 173 8.6E-22 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16265 cf02e7214436283ced8fe159597ff5fc 184 SUPERFAMILY SSF143414 3 93 1.83E-25 T 28-03-2018 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 Gene3D G3DSA:3.40.50.1100 169 333 6.9E-36 T 28-03-2018 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 SUPERFAMILY SSF55021 336 423 1.35E-27 T 28-03-2018 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 SUPERFAMILY SSF53686 15 365 6.16E-101 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS24995 4ed5fb71af394393207873bde91be500 514 TIGRFAM TIGR01124 ilvA_2Cterm: threonine ammonia-lyase, biosynthetic 15 512 1.6E-266 T 28-03-2018 IPR005787 Threonine dehydratase, biosynthetic GO:0004794|GO:0009097 KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 ProSitePatterns PS00165 Serine/threonine dehydratases pyridoxal-phosphate attachment site. 53 66 - T 28-03-2018 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site GO:0006520|GO:0030170 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 SUPERFAMILY SSF55021 420 512 1.17E-25 T 28-03-2018 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 29 316 2.4E-78 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS24995 4ed5fb71af394393207873bde91be500 514 Gene3D G3DSA:3.40.1020.10 338 513 2.9E-71 T 28-03-2018 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 Gene3D G3DSA:3.40.50.1100 22 168 9.4E-41 T 28-03-2018 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 329 419 4.0E-28 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CI104_RS24995 4ed5fb71af394393207873bde91be500 514 Pfam PF00585 C-terminal regulatory domain of Threonine dehydratase 425 512 1.3E-27 T 28-03-2018 IPR001721 ACT-like domain KEGG: 00260+4.3.1.19|KEGG: 00290+4.3.1.19 CI104_RS14975 b1a99930ed42ab422427557041fa3cfd 326 Gene3D G3DSA:3.40.50.1100 163 326 1.9E-37 T 28-03-2018 CI104_RS14975 b1a99930ed42ab422427557041fa3cfd 326 Gene3D G3DSA:3.40.50.1100 15 162 9.2E-40 T 28-03-2018 CI104_RS14975 b1a99930ed42ab422427557041fa3cfd 326 SUPERFAMILY SSF53686 8 317 6.29E-97 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS14975 b1a99930ed42ab422427557041fa3cfd 326 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 21 308 8.8E-79 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS28375 16f2b26543cede805df8db036fb4fe34 329 Pfam PF06834 TraU protein 27 328 5.1E-116 T 28-03-2018 IPR009649 TraU CI104_RS23295 2605c40df4110963415c49a8647ecfb5 93 ProDom PD064934 YJCB MEMBRANE INNER ECS5042 21 93 2.0E-33 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CI104_RS23295 2605c40df4110963415c49a8647ecfb5 93 PIRSF PIRSF030798 1 93 3.5E-55 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CI104_RS23295 2605c40df4110963415c49a8647ecfb5 93 Pfam PF15940 Family of unknown function 1 90 4.7E-44 T 28-03-2018 IPR016958 Uncharacterised conserved protein UCP030798 CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 2 235 9.9E-21 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 ProSitePatterns PS01228 Hypothetical cof family signature 1. 2 13 - T 28-03-2018 CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 Pfam PF08282 haloacid dehalogenase-like hydrolase 3 261 1.1E-51 T 28-03-2018 IPR023214 HAD-like domain CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 Gene3D G3DSA:3.40.50.1000 2 286 9.9E-33 T 28-03-2018 IPR023214 HAD-like domain CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 2 261 3.6E-48 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 ProSitePatterns PS01229 Hypothetical cof family signature 2. 216 238 - T 28-03-2018 CI104_RS23515 73bb5284c78688bfdf3eb968dacb3b2e 287 SUPERFAMILY SSF56784 2 263 6.38E-57 T 28-03-2018 IPR023214 HAD-like domain CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 SUPERFAMILY SSF53474 2 249 1.1E-57 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 Gene3D G3DSA:3.40.50.1820 1 252 2.5E-47 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 39 54 1.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 195 209 1.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 82 95 1.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 PRINTS PR00111 Alpha/beta hydrolase fold signature 96 109 1.3E-6 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 TIGRFAM TIGR02427 protocat_pcaD: 3-oxoadipate enol-lactonase 3 248 1.0E-83 T 28-03-2018 IPR026968 3-oxoadipate enol-lactonase 1/2 GO:0042952|GO:0047570 KEGG: 00362+3.1.1.24|MetaCyc: PWY-6185 CI104_RS13785 95951a54d4e877d5a0075a85de400472 254 Pfam PF00561 alpha/beta hydrolase fold 14 236 8.3E-14 T 28-03-2018 IPR000073 Alpha/beta hydrolase fold-1 CI104_RS14500 cfd15e7da0871491ea4b44287e920671 392 SUPERFAMILY SSF81648 226 353 5.36E-35 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CI104_RS14500 cfd15e7da0871491ea4b44287e920671 392 Pfam PF00032 Cytochrome b(C-terminal)/b6/petD 262 347 9.7E-28 T 28-03-2018 IPR005798 Cytochrome b/b6, C-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CI104_RS14500 cfd15e7da0871491ea4b44287e920671 392 SUPERFAMILY SSF81342 19 264 7.85E-68 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS14500 cfd15e7da0871491ea4b44287e920671 392 Pfam PF00033 Cytochrome b/b6/petB 30 202 9.0E-53 T 28-03-2018 IPR005797 Cytochrome b/b6, N-terminal GO:0009055|GO:0016020|GO:0016491 Reactome: R-HSA-611105 CI104_RS14500 cfd15e7da0871491ea4b44287e920671 392 Gene3D G3DSA:1.20.810.10 5 392 3.5E-110 T 28-03-2018 IPR027387 Cytochrome b/b6-like domain Reactome: R-HSA-611105 CI104_RS06685 340fed0c34622935b7d24c5c0471a7f5 159 Gene3D G3DSA:3.90.960.10 1 159 4.8E-42 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS06685 340fed0c34622935b7d24c5c0471a7f5 159 Pfam PF04073 Aminoacyl-tRNA editing domain 31 144 1.1E-21 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS06685 340fed0c34622935b7d24c5c0471a7f5 159 SUPERFAMILY SSF55826 2 155 4.97E-44 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS06685 340fed0c34622935b7d24c5c0471a7f5 159 PIRSF PIRSF006181 1 159 3.4E-57 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CI104_RS06685 340fed0c34622935b7d24c5c0471a7f5 159 TIGRFAM TIGR00011 YbaK_EbsC: Cys-tRNA(Pro) deacylase 2 156 7.5E-56 T 28-03-2018 IPR004369 Prolyl-tRNA editing protein, YbaK/EbsC CI104_RS23245 55fc90a4937d33de39028866504d2e24 548 TIGRFAM TIGR00831 a_cpa1: Na+/H+ antiporter 7 544 1.2E-247 T 28-03-2018 IPR004705 Cation/H+ exchanger, CPA1 family, bacteria GO:0006812|GO:0015299|GO:0016021 CI104_RS23245 55fc90a4937d33de39028866504d2e24 548 Pfam PF00999 Sodium/hydrogen exchanger family 7 421 1.1E-75 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CI104_RS27855 a1d52e292dfc63c30c221767e9b84b21 143 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 4 142 1.2E-67 T 28-03-2018 IPR009385 Plasmid SOS inhibition CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 TIGRFAM TIGR03496 FliI_clade1: flagellar protein export ATPase FliI 29 450 2.2E-196 T 28-03-2018 IPR020005 Flagellar export ATPase FliI, clade 1 GO:0016887|GO:0044780|GO:0071973 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 162 373 2.1E-70 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 Gene3D G3DSA:3.40.50.300 52 373 3.5E-81 T 28-03-2018 CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 SUPERFAMILY SSF52540 109 379 1.9E-92 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 364 373 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 SMART SM00382 174 357 8.6E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS15860 816ff1f72fa185aa86160775ff9fb78e 456 TIGRFAM TIGR01026 fliI_yscN: ATPase, FliI/YscN family 6 453 3.7E-199 T 28-03-2018 IPR005714 ATPase, type III secretion system, FliI/YscN GO:0005737|GO:0009058|GO:0016887|GO:0030254|GO:0030257 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS05605 0f40de3884ada7c27e0367efbd42283c 127 Pfam PF16695 Type VI secretion system (T6SS), amidase immunity protein 40 121 1.8E-20 T 28-03-2018 IPR032032 Type VI secretion system (T6SS), amidase immunity protein CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 Pfam PF00239 Resolvase, N terminal domain 3 136 5.7E-44 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 SUPERFAMILY SSF46689 139 183 2.56E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 Gene3D G3DSA:3.40.50.1390 1 107 9.2E-33 T 28-03-2018 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 SUPERFAMILY SSF53041 1 136 7.32E-44 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 Gene3D G3DSA:1.10.10.60 139 189 2.1E-7 T 28-03-2018 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 Pfam PF02796 Helix-turn-helix domain of resolvase 139 181 6.3E-12 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 Gene3D G3DSA:1.20.5.40 108 135 1.7E-19 T 28-03-2018 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS10880 4b0898c044fb4e1b99aa4444d6879ab4 193 SMART SM00857 3 137 1.6E-56 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS03015 de76b758d9ba86fef7735a4f5c2f70ef 263 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 263 4.5E-90 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS03015 de76b758d9ba86fef7735a4f5c2f70ef 263 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 263 5.5E-123 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS13800 01047ec8f48af93ae764e30e00c8869f 218 ProSitePatterns PS01274 Coenzyme A transferases signature 2. 45 53 - T 28-03-2018 IPR004164 Coenzyme A transferase active site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS13800 01047ec8f48af93ae764e30e00c8869f 218 TIGRFAM TIGR02428 pcaJ_scoB_fam: 3-oxoacid CoA-transferase, B subunit 5 209 1.6E-90 T 28-03-2018 IPR012791 3-oxoacid CoA-transferase, subunit B GO:0008410 Reactome: R-HSA-77108 CI104_RS13800 01047ec8f48af93ae764e30e00c8869f 218 SUPERFAMILY SSF100950 6 211 4.89E-62 T 28-03-2018 CI104_RS13800 01047ec8f48af93ae764e30e00c8869f 218 SMART SM00882 7 204 7.2E-65 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS13800 01047ec8f48af93ae764e30e00c8869f 218 Gene3D G3DSA:3.40.1080.10 4 213 8.2E-55 T 28-03-2018 CI104_RS13800 01047ec8f48af93ae764e30e00c8869f 218 Pfam PF01144 Coenzyme A transferase 7 200 7.2E-37 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS20650 d45d86843531e32bedbb54a34bf3263d 166 SUPERFAMILY SSF49401 26 165 4.87E-25 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20650 d45d86843531e32bedbb54a34bf3263d 166 Gene3D G3DSA:2.60.40.1090 35 166 2.0E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 PIRSF PIRSF002888 2 331 3.3E-100 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 SUPERFAMILY SSF103039 49 231 4.18E-18 T 28-03-2018 IPR028976 CheC-like domain CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 Gene3D G3DSA:3.40.1550.10 46 234 5.9E-37 T 28-03-2018 IPR028976 CheC-like domain CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 89 105 2.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 114 133 2.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 3 16 2.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 PRINTS PR00955 Flagellar motor switch protein FliM signature 213 231 2.9E-32 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 TIGRFAM TIGR01397 fliM_switch: flagellar motor switch protein FliM 4 321 3.8E-118 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 SUPERFAMILY SSF101801 249 323 1.19E-12 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 Pfam PF01052 Type III flagellar switch regulator (C-ring) FliN C-term 253 321 5.4E-16 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 Gene3D G3DSA:2.30.330.10 239 329 1.5E-15 T 28-03-2018 IPR001543 Surface presentation of antigen (SpoA) CI104_RS15880 d5e645c08571cc9ac338e349c5e61913 334 Pfam PF02154 Flagellar motor switch protein FliM 38 231 8.7E-80 T 28-03-2018 IPR001689 Flagellar motor switch protein FliM GO:0003774|GO:0009425|GO:0071973 CI104_RS22390 55b2e4439b99a4a9858985c8515bc099 469 ProSitePatterns PS00218 Amino acid permeases signature. 52 82 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS22390 55b2e4439b99a4a9858985c8515bc099 469 Pfam PF00324 Amino acid permease 27 465 1.6E-123 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS22390 55b2e4439b99a4a9858985c8515bc099 469 PIRSF PIRSF006060 1 469 2.7E-69 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS02480 5445fa01401c052e2cbc0873a6c0b374 197 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 182 4.6E-68 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS02480 5445fa01401c052e2cbc0873a6c0b374 197 Pfam PF02545 Maf-like protein 4 184 1.1E-57 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS02480 5445fa01401c052e2cbc0873a6c0b374 197 Hamap MF_00528 Septum formation protein Maf [maf]. 3 189 32.072 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS02480 5445fa01401c052e2cbc0873a6c0b374 197 PIRSF PIRSF006305 1 191 5.9E-53 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS02480 5445fa01401c052e2cbc0873a6c0b374 197 Gene3D G3DSA:3.90.950.10 1 188 1.2E-68 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS02480 5445fa01401c052e2cbc0873a6c0b374 197 SUPERFAMILY SSF52972 2 184 4.84E-62 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 Gene3D G3DSA:1.20.1250.20 10 225 4.3E-26 T 28-03-2018 CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 73 89 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 SUPERFAMILY SSF103473 14 420 2.49E-67 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 ProSitePatterns PS00216 Sugar transport proteins signature 1. 291 308 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 Pfam PF07690 Major Facilitator Superfamily 19 376 1.1E-29 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 20 409 3.1E-143 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 Gene3D G3DSA:1.20.1250.20 230 430 3.8E-21 T 28-03-2018 CI104_RS07725 d4d5e67a1968f3c03e6e4bbea90e6bb8 431 ProSitePatterns PS00217 Sugar transport proteins signature 2. 123 148 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS00750 c665eb1c2782951c78ae9d608da0ef13 383 SUPERFAMILY SSF56796 5 382 1.02E-130 T 28-03-2018 CI104_RS00750 c665eb1c2782951c78ae9d608da0ef13 383 Gene3D G3DSA:1.20.1090.10 184 383 8.2E-67 T 28-03-2018 CI104_RS00750 c665eb1c2782951c78ae9d608da0ef13 383 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 173 201 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS00750 c665eb1c2782951c78ae9d608da0ef13 383 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 260 280 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS00750 c665eb1c2782951c78ae9d608da0ef13 383 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 375 6.5E-119 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS00750 c665eb1c2782951c78ae9d608da0ef13 383 Gene3D G3DSA:3.40.50.1970 9 183 1.3E-44 T 28-03-2018 CI104_RS28060 e6bd2259ba5be42cb2ce50fbfe033f56 143 Pfam PF00717 Peptidase S24-like 59 122 1.6E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS28060 e6bd2259ba5be42cb2ce50fbfe033f56 143 SUPERFAMILY SSF51306 20 137 4.58E-31 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS28060 e6bd2259ba5be42cb2ce50fbfe033f56 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 54 64 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS28060 e6bd2259ba5be42cb2ce50fbfe033f56 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 93 105 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS28060 e6bd2259ba5be42cb2ce50fbfe033f56 143 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 65 76 2.3E-8 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS28060 e6bd2259ba5be42cb2ce50fbfe033f56 143 Gene3D G3DSA:2.10.109.10 23 139 7.6E-25 T 28-03-2018 CI104_RS06180 2cd8f826b634d989a88abe4142760504 464 Pfam PF13163 Protein of unknown function (DUF3999) 30 453 3.4E-104 T 28-03-2018 IPR025060 Protein of unknown function DUF3999 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 Pfam PF03466 LysR substrate binding domain 105 278 1.4E-17 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 Gene3D G3DSA:3.40.190.10 179 268 3.8E-9 T 28-03-2018 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 Gene3D G3DSA:3.40.190.10 93 178 7.6E-5 T 28-03-2018 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 63 2.1E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 7.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 7.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 7.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 SUPERFAMILY SSF53850 108 288 2.9E-20 T 28-03-2018 CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 Gene3D G3DSA:1.10.10.10 2 92 1.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04375 0e9e6b04a17366ecdd8df9a629681578 311 SUPERFAMILY SSF46785 3 87 4.54E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01920 06a715d0c83d25097923adc028471efd 134 Gene3D G3DSA:2.20.25.10 1 29 7.2E-15 T 28-03-2018 CI104_RS01920 06a715d0c83d25097923adc028471efd 134 Gene3D G3DSA:3.30.300.20 35 134 6.1E-20 T 28-03-2018 IPR015946 K homology domain-like, alpha/beta CI104_RS01920 06a715d0c83d25097923adc028471efd 134 Pfam PF02566 OsmC-like protein 30 127 1.6E-19 T 28-03-2018 IPR003718 OsmC/Ohr family CI104_RS01920 06a715d0c83d25097923adc028471efd 134 SUPERFAMILY SSF82784 1 131 3.93E-43 T 28-03-2018 IPR003718 OsmC/Ohr family CI104_RS13245 818ea3585cc140728f77923c520b83fd 297 Gene3D G3DSA:3.10.310.10 127 284 1.0E-31 T 28-03-2018 CI104_RS13245 818ea3585cc140728f77923c520b83fd 297 PIRSF PIRSF016184 1 295 9.6E-91 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CI104_RS13245 818ea3585cc140728f77923c520b83fd 297 SUPERFAMILY SSF54506 1 291 5.01E-66 T 28-03-2018 CI104_RS13245 818ea3585cc140728f77923c520b83fd 297 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 1 295 2.4E-116 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CI104_RS13245 818ea3585cc140728f77923c520b83fd 297 Gene3D G3DSA:3.10.310.10 2 126 5.4E-28 T 28-03-2018 CI104_RS13245 818ea3585cc140728f77923c520b83fd 297 Pfam PF02567 Phenazine biosynthesis-like protein 8 290 2.6E-84 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 SUPERFAMILY SSF49354 24 158 2.88E-41 T 28-03-2018 IPR008962 PapD-like CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 SUPERFAMILY SSF49584 152 246 6.28E-13 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 Gene3D G3DSA:2.60.40.10 160 247 3.0E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 Gene3D G3DSA:2.60.40.10 29 159 8.7E-38 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 30 158 5.0E-43 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 PRINTS PR00969 Pili chaperone signature 30 39 2.4E-28 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 PRINTS PR00969 Pili chaperone signature 140 155 2.4E-28 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 PRINTS PR00969 Pili chaperone signature 109 126 2.4E-28 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 PRINTS PR00969 Pili chaperone signature 80 101 2.4E-28 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 PRINTS PR00969 Pili chaperone signature 179 194 2.4E-28 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS20510 cd6944aae5d13f1b461545bcc5218ef3 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 184 243 9.4E-13 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS25595 8381d72a77fc71172500eea1bc76884c 502 Gene3D G3DSA:1.10.10.60 1 38 1.7E-9 T 28-03-2018 CI104_RS25595 8381d72a77fc71172500eea1bc76884c 502 Pfam PF00665 Integrase core domain 122 249 1.6E-13 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS25595 8381d72a77fc71172500eea1bc76884c 502 SUPERFAMILY SSF46689 5 99 2.51E-6 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS25595 8381d72a77fc71172500eea1bc76884c 502 Gene3D G3DSA:3.30.420.10 113 392 3.6E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS25595 8381d72a77fc71172500eea1bc76884c 502 SUPERFAMILY SSF53098 121 286 8.91E-11 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 Pfam PF04055 Radical SAM superfamily 24 178 1.6E-31 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 TIGRFAM TIGR02493 PFLA: pyruvate formate-lyase 1-activating enzyme 6 239 4.4E-107 T 28-03-2018 IPR012838 Pyruvate formate-lyase activating enzyme GO:0043365|GO:0055114 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 SUPERFAMILY SSF102114 23 216 2.16E-24 T 28-03-2018 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 Gene3D G3DSA:3.80.30.10 68 246 3.1E-40 T 28-03-2018 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 PIRSF PIRSF000371 44 246 2.8E-48 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 PIRSF PIRSF000371 1 47 3.7E-10 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 ProSitePatterns PS01087 Radical activating enzymes signature. 18 39 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CI104_RS09000 5cc15e637f38d87388dbbe587d131baa 246 Pfam PF13353 4Fe-4S single cluster domain 16 141 3.4E-18 T 28-03-2018 CI104_RS14200 b7d0e61478dca98eddfc164e0c9c9acc 212 Pfam PF03922 OmpW family 23 212 7.7E-72 T 28-03-2018 IPR005618 Outer membrane protein, OmpW GO:0019867 CI104_RS14200 b7d0e61478dca98eddfc164e0c9c9acc 212 Gene3D G3DSA:2.40.160.20 22 212 3.5E-34 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS14200 b7d0e61478dca98eddfc164e0c9c9acc 212 SUPERFAMILY SSF56925 23 212 7.59E-27 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS28175 ce54c0de5c6deaeeed7246116464df87 170 Gene3D G3DSA:2.40.50.140 1 120 5.6E-45 T 28-03-2018 CI104_RS28175 ce54c0de5c6deaeeed7246116464df87 170 Hamap MF_00984 Single-stranded DNA-binding protein. 6 117 38.584 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CI104_RS28175 ce54c0de5c6deaeeed7246116464df87 170 TIGRFAM TIGR00621 ssb: single-stranded DNA-binding protein 3 170 5.8E-55 T 28-03-2018 IPR011344 Single-stranded DNA-binding protein GO:0003697|GO:0006260 Reactome: R-HSA-2151201 CI104_RS28175 ce54c0de5c6deaeeed7246116464df87 170 Pfam PF00436 Single-strand binding protein family 6 112 6.3E-41 T 28-03-2018 IPR000424 Primosome PriB/single-strand DNA-binding GO:0003697 Reactome: R-HSA-2151201 CI104_RS28175 ce54c0de5c6deaeeed7246116464df87 170 SUPERFAMILY SSF50249 4 170 1.23E-56 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS28175 ce54c0de5c6deaeeed7246116464df87 170 PIRSF PIRSF002070 2 167 1.4E-40 T 28-03-2018 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 172 200 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 2 378 3.7E-180 T 28-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 SUPERFAMILY SSF56796 3 380 3.93E-127 T 28-03-2018 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 Gene3D G3DSA:3.40.50.1970 8 182 3.1E-43 T 28-03-2018 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 Pfam PF00465 Iron-containing alcohol dehydrogenase 9 374 1.5E-122 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 Gene3D G3DSA:1.20.1090.10 184 382 1.6E-68 T 28-03-2018 CI104_RS24305 f07795139d8467b53a571e6dfabb3e56 382 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 Pfam PF01381 Helix-turn-helix 7 61 1.2E-14 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 SUPERFAMILY SSF51306 120 217 2.27E-23 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 SMART SM00530 6 61 1.3E-15 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 SUPERFAMILY SSF47413 2 66 7.78E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 Gene3D G3DSA:2.10.109.10 82 214 8.0E-16 T 28-03-2018 CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 Gene3D G3DSA:1.10.260.40 1 71 2.4E-18 T 28-03-2018 CI104_RS11045 27240fa3dc76b3c19b1ce352d3e9623a 218 Pfam PF00717 Peptidase S24-like 128 204 6.0E-12 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS28065 30295a6d19eafc4060e88f3a27bd60e6 323 SUPERFAMILY SSF53067 165 319 1.3E-16 T 28-03-2018 CI104_RS28065 30295a6d19eafc4060e88f3a27bd60e6 323 Pfam PF06406 StbA protein 1 316 2.0E-113 T 28-03-2018 IPR009440 Plasmid segregation protein ParM/StbA CI104_RS28065 30295a6d19eafc4060e88f3a27bd60e6 323 SUPERFAMILY SSF53067 1 155 2.75E-45 T 28-03-2018 CI104_RS28065 30295a6d19eafc4060e88f3a27bd60e6 323 Gene3D G3DSA:3.30.420.40 170 304 3.0E-12 T 28-03-2018 CI104_RS28065 30295a6d19eafc4060e88f3a27bd60e6 323 Gene3D G3DSA:3.30.420.40 1 169 4.0E-28 T 28-03-2018 CI104_RS22630 7d6de5d3723fe56353c42741f08fbe7a 118 Gene3D G3DSA:1.20.1300.10 1 118 7.1E-31 T 28-03-2018 CI104_RS22630 7d6de5d3723fe56353c42741f08fbe7a 118 SUPERFAMILY SSF81343 1 118 2.62E-51 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS22630 7d6de5d3723fe56353c42741f08fbe7a 118 PIRSF PIRSF000179 1 118 1.1E-51 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CI104_RS22630 7d6de5d3723fe56353c42741f08fbe7a 118 ProDom PD015693 FUMARATE MEMBRANE REDUCTASE D SUBUNIT INNER TRANSMEMBRANE HYDROPHOBIC REDUCTASE POLYPEPTIDE 1 118 8.0E-61 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CI104_RS22630 7d6de5d3723fe56353c42741f08fbe7a 118 Hamap MF_00709 Fumarate reductase subunit D [frdD]. 2 118 27.189 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CI104_RS22630 7d6de5d3723fe56353c42741f08fbe7a 118 Pfam PF02313 Fumarate reductase subunit D 6 115 5.4E-50 T 28-03-2018 IPR003418 Fumarate reductase, subunit D GO:0006106|GO:0016020 CI104_RS14045 9246fa6e5424ffd0011793d51b07b1b5 60 Hamap MF_01641 UPF0509 protein YciZ [yciZ]. 1 60 23.971 T 28-03-2018 IPR020887 Uncharacterised protein family UPF0509 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 Pfam PF00196 Bacterial regulatory proteins, luxR family 155 210 5.3E-20 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 Gene3D G3DSA:1.10.10.10 118 214 8.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 186 198 1.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 156 170 1.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 170 186 1.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 ProSitePatterns PS00622 LuxR-type HTH domain signature. 170 197 - T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 SMART SM00421 153 210 6.8E-23 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS10250 4e2d6068276adbd575d8cd441052dc7a 216 SUPERFAMILY SSF46894 148 212 6.46E-19 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS22475 a55e956d7ef021769e8b7be67424282e 249 Gene3D G3DSA:3.40.50.1820 5 249 1.3E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS22475 a55e956d7ef021769e8b7be67424282e 249 Pfam PF00326 Prolyl oligopeptidase family 50 245 7.5E-13 T 28-03-2018 IPR001375 Peptidase S9, prolyl oligopeptidase, catalytic domain GO:0006508|GO:0008236 CI104_RS22475 a55e956d7ef021769e8b7be67424282e 249 SUPERFAMILY SSF53474 13 249 1.09E-39 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS08850 f95761472aabc960a393e36bd436b240 106 SUPERFAMILY SSF54736 22 105 3.77E-33 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CI104_RS08850 f95761472aabc960a393e36bd436b240 106 Gene3D G3DSA:3.30.1390.10 13 105 4.8E-37 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CI104_RS08850 f95761472aabc960a393e36bd436b240 106 Pfam PF02617 ATP-dependent Clp protease adaptor protein ClpS 23 102 1.7E-33 T 28-03-2018 IPR003769 Adaptor protein ClpS, core GO:0030163 Reactome: R-HSA-983168 CI104_RS08850 f95761472aabc960a393e36bd436b240 106 Hamap MF_00302 ATP-dependent Clp protease adapter protein ClpS [clpS]. 15 101 28.18 T 28-03-2018 IPR022935 ATP-dependent Clp protease adaptor protein ClpS CI104_RS22135 231c08e32aa9ed679036f433e1f0a02f 712 SUPERFAMILY SSF51998 121 687 1.28E-201 T 28-03-2018 CI104_RS22135 231c08e32aa9ed679036f433e1f0a02f 712 Pfam PF03477 ATP cone domain 4 89 1.5E-20 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CI104_RS22135 231c08e32aa9ed679036f433e1f0a02f 712 TIGRFAM TIGR02487 NrdD: anaerobic ribonucleoside-triphosphate reductase 115 705 1.5E-210 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CI104_RS22135 231c08e32aa9ed679036f433e1f0a02f 712 Pfam PF13597 Anaerobic ribonucleoside-triphosphate reductase 116 705 1.8E-182 T 28-03-2018 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic GO:0006260|GO:0008998|GO:0016491|GO:0055114 KEGG: 00230+1.17.4.2|KEGG: 00240+1.17.4.2 CI104_RS22135 231c08e32aa9ed679036f433e1f0a02f 712 ProSitePatterns PS00850 Glycine radical domain signature. 676 684 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CI104_RS22135 231c08e32aa9ed679036f433e1f0a02f 712 Gene3D G3DSA:3.20.70.20 121 687 1.1E-208 T 28-03-2018 CI104_RS18170 9c865404198386e651fcd430003545a2 365 TIGRFAM TIGR00968 3a0106s01: sulfate ABC transporter, ATP-binding protein 3 243 1.2E-127 T 28-03-2018 IPR005666 Sulphate transport system permease protein 1 GO:0006810|GO:0016020|GO:0042626 KEGG: 00920+3.6.3.25 CI104_RS18170 9c865404198386e651fcd430003545a2 365 Pfam PF12857 TOBE-like domain 289 339 4.1E-7 T 28-03-2018 IPR024765 TOBE-like domain KEGG: 00920+3.6.3.25 CI104_RS18170 9c865404198386e651fcd430003545a2 365 Gene3D G3DSA:3.40.50.300 1 256 5.4E-77 T 28-03-2018 CI104_RS18170 9c865404198386e651fcd430003545a2 365 SUPERFAMILY SSF50331 239 345 1.28E-12 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS18170 9c865404198386e651fcd430003545a2 365 Pfam PF00005 ABC transporter 18 164 1.3E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS18170 9c865404198386e651fcd430003545a2 365 SMART SM00382 27 214 2.4E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS18170 9c865404198386e651fcd430003545a2 365 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS18170 9c865404198386e651fcd430003545a2 365 SUPERFAMILY SSF52540 3 244 3.34E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26820 2e0ae628e06a188f59d211535a877d58 101 Pfam PF03551 Transcriptional regulator PadR-like family 15 84 4.7E-21 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal CI104_RS26820 2e0ae628e06a188f59d211535a877d58 101 Gene3D G3DSA:1.10.10.10 1 93 6.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26820 2e0ae628e06a188f59d211535a877d58 101 SUPERFAMILY SSF46785 4 97 1.11E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 SUPERFAMILY SSF51735 141 305 2.1E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 Hamap MF_00627 L-threonine 3-dehydrogenase [tdh]. 1 340 61.029 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 TIGRFAM TIGR00692 tdh: L-threonine 3-dehydrogenase 3 340 1.6E-188 T 28-03-2018 IPR004627 L-threonine 3-dehydrogenase GO:0006567|GO:0008270|GO:0008743|GO:0055114 KEGG: 00040+1.1.1.10|KEGG: 00260+1.1.1.103|MetaCyc: PWY-5515|MetaCyc: PWY-5525|MetaCyc: PWY-7378 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 ProSitePatterns PS00059 Zinc-containing alcohol dehydrogenases signature. 62 76 - T 28-03-2018 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site GO:0008270|GO:0016491|GO:0055114 Reactome: R-HSA-71384 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 Gene3D G3DSA:3.90.180.10 1 152 2.2E-46 T 28-03-2018 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 SUPERFAMILY SSF50129 1 173 7.91E-54 T 28-03-2018 IPR011032 GroES-like CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 Pfam PF00107 Zinc-binding dehydrogenase 174 301 1.3E-27 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 SMART SM00829 12 338 6.9E-6 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 26 134 3.7E-32 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS00620 1d7aef50b2eb5486b0bd722f14c9534b 341 Gene3D G3DSA:3.40.50.10730 153 303 5.3E-27 T 28-03-2018 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 SUPERFAMILY SSF81343 2 129 4.25E-36 T 28-03-2018 IPR034804 Fumarate reductase/succinate dehydrogenase, transmembrane subunit GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 Gene3D G3DSA:1.20.1300.10 1 129 1.6E-27 T 28-03-2018 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 ProSitePatterns PS01000 Succinate dehydrogenase cytochrome b subunit signature 1. 9 33 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 TIGRFAM TIGR02970 succ_dehyd_cytB: succinate dehydrogenase, cytochrome b556 subunit 7 126 2.6E-39 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 PIRSF PIRSF000178 1 129 1.8E-32 T 28-03-2018 IPR014314 Succinate dehydrogenase, cytochrome b556 subunit GO:0000104|GO:0006099|GO:0045281 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 Pfam PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit 6 123 2.2E-30 T 28-03-2018 IPR000701 Succinate dehydrogenase/fumarate reductase type B, transmembrane subunit GO:0016627 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07890 f236e77640310291c32452ef20e058dd 129 ProSitePatterns PS01001 Succinate dehydrogenase cytochrome b subunit signature 2. 84 97 - T 28-03-2018 IPR018495 Succinate dehydrogenase, cytochrome b subunit, conserved site GO:0000104|GO:0006099|GO:0009055|GO:0016020 Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS08790 ec723dd34e8c2c135a263c4c5e33898c 333 Gene3D G3DSA:3.90.1150.10 248 333 3.2E-19 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS08790 ec723dd34e8c2c135a263c4c5e33898c 333 SUPERFAMILY SSF53383 1 332 2.93E-114 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS08790 ec723dd34e8c2c135a263c4c5e33898c 333 PIRSF PIRSF017617 1 333 2.6E-130 T 28-03-2018 IPR023603 Threonine aldolase CI104_RS08790 ec723dd34e8c2c135a263c4c5e33898c 333 Gene3D G3DSA:3.40.640.10 17 247 2.7E-46 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS08790 ec723dd34e8c2c135a263c4c5e33898c 333 Pfam PF01212 Beta-eliminating lyase 3 282 1.4E-96 T 28-03-2018 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase GO:0006520|GO:0016829 Reactome: R-HSA-6783984 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 TIGRFAM TIGR02812 fadR_gamma: fatty acid metabolism transcriptional regulator FadR 2 235 5.3E-123 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 45 61 2.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 31 45 2.7E-9 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 Pfam PF00392 Bacterial regulatory proteins, gntR family 11 71 5.8E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 Pfam PF07840 FadR C-terminal domain 72 234 1.5E-72 T 28-03-2018 IPR028374 FadR, C-terminal domain GO:0000062|GO:0019217 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 SUPERFAMILY SSF46785 11 88 2.48E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 SMART SM00345 12 71 5.9E-23 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 SUPERFAMILY SSF48008 79 230 3.79E-64 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 Hamap MF_00696 Fatty acid metabolism regulator protein [fadR]. 1 239 161.555 T 28-03-2018 IPR014178 Fatty acid response transcription factor FadR GO:0000062|GO:0003677|GO:0003700|GO:0019217 CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 Gene3D G3DSA:1.20.120.530 80 239 5.9E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS14640 a8f0f3b643c28c35b80019be063525eb 239 Gene3D G3DSA:1.10.10.10 1 79 7.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10125 9f153bc29126099e48106471ded50a67 184 Pfam PF00578 AhpC/TSA family 48 161 1.3E-15 T 28-03-2018 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant GO:0016209|GO:0016491|GO:0055114 KEGG: 00480+1.11.1.15|Reactome: R-HSA-3299685 CI104_RS10125 9f153bc29126099e48106471ded50a67 184 SUPERFAMILY SSF52833 46 182 3.05E-30 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS10125 9f153bc29126099e48106471ded50a67 184 Gene3D G3DSA:3.40.30.10 42 184 3.3E-29 T 28-03-2018 CI104_RS20580 84271f5ab6a438495c489e535a55da2c 76 Pfam PF06902 Divergent 4Fe-4S mono-cluster 13 74 5.6E-27 T 28-03-2018 IPR010693 Divergent 4Fe-4S mono-cluster CI104_RS08950 fd6b7ab2f891cbd4b356f44a64b0983c 287 Gene3D G3DSA:1.20.1630.10 3 285 1.8E-45 T 28-03-2018 CI104_RS08950 fd6b7ab2f891cbd4b356f44a64b0983c 287 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 277 3.9E-113 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CI104_RS01505 f0498bdc625d4b19e3b72fbf60631707 162 SUPERFAMILY SSF55729 4 161 7.85E-38 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS01505 f0498bdc625d4b19e3b72fbf60631707 162 Gene3D G3DSA:3.40.630.30 1 162 1.2E-35 T 28-03-2018 CI104_RS01505 f0498bdc625d4b19e3b72fbf60631707 162 Pfam PF00583 Acetyltransferase (GNAT) family 34 136 6.7E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 135 149 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 Pfam PF00849 RNA pseudouridylate synthase 92 242 7.7E-31 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 13 313 4.1E-108 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 SUPERFAMILY SSF55120 78 322 5.55E-78 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 SMART SM00363 18 83 1.0E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 Gene3D G3DSA:3.10.290.10 2 76 1.6E-20 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 Pfam PF01479 S4 domain 18 65 9.1E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 SUPERFAMILY SSF55174 17 69 2.35E-11 T 28-03-2018 CI104_RS18950 24ff745087321397604d9d16102c0aa5 326 Gene3D G3DSA:3.30.2350.10 83 316 4.3E-68 T 28-03-2018 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 Gene3D G3DSA:3.40.50.1950 1 183 1.3E-52 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 TIGRFAM TIGR00521 coaBC_dfp: phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase 3 397 7.2E-164 T 28-03-2018 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC GO:0004632|GO:0004633|GO:0010181|GO:0015937|GO:0015941 KEGG: 00770+4.1.1.36+6.3.2.5|MetaCyc: PWY-7851 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 Pfam PF04127 DNA / pantothenate metabolism flavoprotein 187 371 2.3E-72 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 Pfam PF02441 Flavoprotein 6 176 1.1E-41 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 SUPERFAMILY SSF102645 184 401 6.67E-79 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 Gene3D G3DSA:3.40.50.10300 184 405 7.7E-67 T 28-03-2018 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal KEGG: 00770+6.3.2.5|Reactome: R-HSA-196783 CI104_RS00510 59ca2f4d3ea94dd4d4ce7a0f1a005581 406 SUPERFAMILY SSF52507 3 179 5.89E-58 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS19125 74394ca02d0ad84a96ff185ea4beff22 75 SUPERFAMILY SSF159501 17 63 2.88E-13 T 28-03-2018 CI104_RS19125 74394ca02d0ad84a96ff185ea4beff22 75 Gene3D G3DSA:3.40.1660.10 3 66 3.2E-11 T 28-03-2018 CI104_RS27290 b4b63c75f6cec5fefa5d8a50e6fef43f 457 Gene3D G3DSA:1.20.1250.20 215 440 1.5E-19 T 28-03-2018 CI104_RS27290 b4b63c75f6cec5fefa5d8a50e6fef43f 457 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 11 444 1.4E-143 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS27290 b4b63c75f6cec5fefa5d8a50e6fef43f 457 SUPERFAMILY SSF103473 1 430 1.66E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS27290 b4b63c75f6cec5fefa5d8a50e6fef43f 457 Gene3D G3DSA:1.20.1250.20 1 207 1.6E-12 T 28-03-2018 CI104_RS27290 b4b63c75f6cec5fefa5d8a50e6fef43f 457 Pfam PF13347 MFS/sugar transport protein 12 431 1.3E-95 T 28-03-2018 CI104_RS27290 b4b63c75f6cec5fefa5d8a50e6fef43f 457 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 61 86 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 Pfam PF00072 Response regulator receiver domain 4 112 7.2E-29 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 Gene3D G3DSA:3.40.50.2300 1 118 1.2E-35 T 28-03-2018 CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 SMART SM00862 147 223 6.6E-22 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 Pfam PF00486 Transcriptional regulatory protein, C terminal 148 223 1.2E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 SMART SM00448 2 112 9.4E-40 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 SUPERFAMILY SSF52172 3 176 1.85E-39 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS07785 69b81b0a381dc4c8bcc4ba7348428b08 225 Gene3D G3DSA:1.10.10.10 119 225 6.0E-29 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 SUPERFAMILY SSF56601 29 287 2.82E-76 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 Pfam PF13354 Beta-lactamase enzyme family 53 261 4.1E-39 T 28-03-2018 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 Gene3D G3DSA:3.40.710.10 26 287 1.8E-33 T 28-03-2018 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 141 165 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 32 56 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 105 130 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 63 80 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 203 218 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 167 192 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS28570 736ad144c05102c209f26e41ec12b3d1 293 PRINTS PR00118 Beta-lactamase class A signature 220 235 4.3E-72 T 28-03-2018 IPR000871 Beta-lactamase, class-A GO:0008800|GO:0030655|GO:0046677 KEGG: 00311+3.5.2.6 CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 SUPERFAMILY SSF48557 3 503 5.89E-190 T 28-03-2018 IPR008948 L-Aspartase-like GO:0003824 CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 Gene3D G3DSA:1.10.275.10 2 197 3.4E-72 T 28-03-2018 IPR024083 Fumarase/histidase, N-terminal CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 Pfam PF00221 Aromatic amino acid lyase 11 470 6.9E-185 T 28-03-2018 IPR001106 Aromatic amino acid lyase Reactome: R-HSA-70921 CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 Gene3D G3DSA:1.20.200.10 199 504 2.7E-116 T 28-03-2018 CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 TIGRFAM TIGR01225 hutH: histidine ammonia-lyase 4 503 2.8E-219 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 ProSitePatterns PS00488 Phenylalanine and histidine ammonia-lyases signature. 139 155 - T 28-03-2018 IPR022313 Phenylalanine/histidine ammonia-lyases, active site GO:0016841 Reactome: R-HSA-70921 CI104_RS08255 5236120c34b3b10051d55c5e59a575ad 506 Hamap MF_00229 Histidine ammonia-lyase [hutH]. 3 504 44.339 T 28-03-2018 IPR005921 Histidine ammonia-lyase GO:0004397|GO:0005737|GO:0006548 KEGG: 00340+4.3.1.3|MetaCyc: PWY-5028|MetaCyc: PWY-5030|Reactome: R-HSA-70921 CI104_RS09965 87bd7cf669af609542c7bfa7d67e5260 86 Gene3D G3DSA:1.10.1200.10 1 81 2.2E-13 T 28-03-2018 CI104_RS09965 87bd7cf669af609542c7bfa7d67e5260 86 ProSitePatterns PS00012 Phosphopantetheine attachment site. 34 49 - T 28-03-2018 IPR006162 Phosphopantetheine attachment site CI104_RS09965 87bd7cf669af609542c7bfa7d67e5260 86 Pfam PF00550 Phosphopantetheine attachment site 23 74 1.1E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS09965 87bd7cf669af609542c7bfa7d67e5260 86 SUPERFAMILY SSF47336 24 78 9.29E-14 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 PIRSF PIRSF002134 1 118 8.1E-42 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 Gene3D G3DSA:1.10.8.50 1 66 4.2E-21 T 28-03-2018 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 Gene3D G3DSA:4.10.910.10 67 84 4.4E-18 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 Hamap MF_01315 30S ribosomal protein S13 [rpsM]. 1 118 25.431 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 ProSitePatterns PS00646 Ribosomal protein S13 signature. 87 100 - T 28-03-2018 IPR018269 Ribosomal protein S13, conserved site GO:0003723|GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 TIGRFAM TIGR03631 uS13_bact: ribosomal protein uS13 3 114 9.9E-53 T 28-03-2018 IPR019980 Ribosomal protein S13, bacterial-type GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 Pfam PF00416 Ribosomal protein S13/S18 3 108 9.4E-34 T 28-03-2018 IPR001892 Ribosomal protein S13 GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 Gene3D G3DSA:4.10.910.10 85 118 1.9E-26 T 28-03-2018 IPR027437 30s ribosomal protein S13, C-terminal Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02155 8874cda1c5386fd24b4ad72051a69f70 118 SUPERFAMILY SSF46946 2 114 1.68E-45 T 28-03-2018 IPR010979 Ribosomal protein S13-like, H2TH GO:0003676 CI104_RS11005 630f30f56d648e36cd34bc76a0a1ab33 222 Gene3D G3DSA:3.30.70.1560 120 202 1.6E-24 T 28-03-2018 CI104_RS11005 630f30f56d648e36cd34bc76a0a1ab33 222 ProSitePatterns PS01149 Rsu family of pseudouridine synthase signature. 76 90 - T 28-03-2018 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS11005 630f30f56d648e36cd34bc76a0a1ab33 222 Gene3D G3DSA:3.30.70.580 33 119 1.4E-14 T 28-03-2018 CI104_RS11005 630f30f56d648e36cd34bc76a0a1ab33 222 TIGRFAM TIGR00093 TIGR00093: pseudouridine synthase 45 216 1.3E-60 T 28-03-2018 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F GO:0001522|GO:0003723|GO:0009451|GO:0016866 CI104_RS11005 630f30f56d648e36cd34bc76a0a1ab33 222 SUPERFAMILY SSF55120 36 219 9.44E-43 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS11005 630f30f56d648e36cd34bc76a0a1ab33 222 Pfam PF00849 RNA pseudouridylate synthase 41 186 2.3E-13 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 SUPERFAMILY SSF54211 11 169 1.4E-28 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 Gene3D G3DSA:3.40.50.300 186 442 3.0E-23 T 28-03-2018 CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 Pfam PF13541 Subunit ChlI of Mg-chelatase 21 142 1.0E-42 T 28-03-2018 CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 Pfam PF01078 Magnesium chelatase, subunit ChlI 189 386 2.5E-88 T 28-03-2018 IPR000523 Magnesium chelatase ChlI domain CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 Gene3D G3DSA:3.30.230.10 2 185 2.4E-36 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 Pfam PF13335 Magnesium chelatase, subunit ChlI C-terminal 400 492 8.3E-29 T 28-03-2018 IPR025158 Mg chelatase-related protein, C-terminal domain CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 SUPERFAMILY SSF52540 189 498 2.49E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 288 303 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 SMART SM00382 209 389 3.7E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25025 8617a997523d1f40c538360f248e28c3 506 TIGRFAM TIGR00368 TIGR00368: Mg chelatase-like protein 6 492 2.1E-231 T 28-03-2018 IPR004482 Mg chelatase-related protein CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 Pfam PF03797 Autotransporter beta-domain 715 952 5.5E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 SMART SM00869 712 962 5.5E-42 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 PRINTS PR01484 Pertactin virulence factor family signature 953 973 7.5E-11 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 PRINTS PR01484 Pertactin virulence factor family signature 891 912 7.5E-11 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 PRINTS PR01484 Pertactin virulence factor family signature 752 776 7.5E-11 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 PRINTS PR01484 Pertactin virulence factor family signature 928 953 7.5E-11 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 PRINTS PR01484 Pertactin virulence factor family signature 862 885 7.5E-11 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 PRINTS PR01484 Pertactin virulence factor family signature 712 732 7.5E-11 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 SUPERFAMILY SSF103515 681 973 2.35E-52 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 Gene3D G3DSA:2.160.20.20 445 686 3.4E-9 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 Gene3D G3DSA:2.160.20.20 20 444 2.5E-15 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 577 973 7.1E-81 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 SUPERFAMILY SSF51126 173 672 5.02E-21 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS06005 ab3fb1d8042662d0b952337f753c9790 973 Gene3D G3DSA:2.40.128.130 687 973 1.2E-47 T 28-03-2018 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 Pfam PF01578 Cytochrome C assembly protein 92 299 3.5E-46 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 562 575 6.2E-31 T 28-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 449 468 6.2E-31 T 28-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 376 388 6.2E-31 T 28-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 342 360 6.2E-31 T 28-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01413 Cytochrome c-type biogenesis protein NrfE signature 321 336 6.2E-31 T 28-03-2018 IPR003570 Cytochrome c-type biogenesis protein NrfE GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 83 109 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 162 184 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 213 239 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 277 297 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 297 313 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 313 332 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 135 152 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 PRINTS PR01410 Cytochrome c-type biogenesis protein signature 247 267 2.6E-71 T 28-03-2018 IPR003567 Cytochrome c-type biogenesis protein GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 320 418 3.1E-20 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CI104_RS23170 280632426b43bf61d5217138e2dc8499 575 Pfam PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal 419 566 2.5E-38 T 28-03-2018 IPR032523 Cytochrome c-type biogenesis protein CcmF, C-terminal CI104_RS01460 df3a421505b9aa6f79148830af5706e9 255 ProSitePatterns PS00211 ABC transporters family signature. 154 168 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01460 df3a421505b9aa6f79148830af5706e9 255 SMART SM00382 30 230 2.5E-7 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01460 df3a421505b9aa6f79148830af5706e9 255 Pfam PF12399 Branched-chain amino acid ATP-binding cassette transporter 233 253 1.9E-10 T 28-03-2018 IPR032823 Branched-chain amino acid ATP-binding cassette transporter, C-terminal CI104_RS01460 df3a421505b9aa6f79148830af5706e9 255 Pfam PF00005 ABC transporter 21 181 4.2E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01460 df3a421505b9aa6f79148830af5706e9 255 Gene3D G3DSA:3.40.50.300 1 253 6.9E-57 T 28-03-2018 CI104_RS01460 df3a421505b9aa6f79148830af5706e9 255 SUPERFAMILY SSF52540 4 253 3.24E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 Pfam PF03129 Anticodon binding domain 340 420 6.7E-10 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 TIGRFAM TIGR00442 hisS: histidine--tRNA ligase 6 411 6.5E-156 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 Hamap MF_00127 Histidine--tRNA ligase [hisS]. 3 421 33.742 T 28-03-2018 IPR015807 Histidine-tRNA ligase GO:0004821|GO:0005524|GO:0006427 KEGG: 00970+6.1.1.21 CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 PIRSF PIRSF001549 2 423 3.6E-129 T 28-03-2018 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit GO:0005737 CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 Gene3D G3DSA:3.30.930.10 2 325 9.6E-75 T 28-03-2018 CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 Gene3D G3DSA:3.40.50.800 326 424 7.8E-17 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 SUPERFAMILY SSF55681 5 318 4.98E-105 T 28-03-2018 CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 Pfam PF13393 Histidyl-tRNA synthetase 10 312 4.4E-46 T 28-03-2018 CI104_RS18540 ca21e691875e7a02ac8415a8d51ea824 424 SUPERFAMILY SSF52954 329 422 2.29E-24 T 28-03-2018 IPR004154 Anticodon-binding CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 SUPERFAMILY SSF53850 89 289 1.07E-42 T 28-03-2018 CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 Gene3D G3DSA:3.40.190.10 178 261 1.7E-21 T 28-03-2018 CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 Gene3D G3DSA:1.10.10.10 3 85 7.8E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 Gene3D G3DSA:3.40.190.10 93 177 3.8E-11 T 28-03-2018 CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 SUPERFAMILY SSF46785 5 89 2.72E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 Pfam PF03466 LysR substrate binding domain 89 287 7.1E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS21135 463246f6cbdb4c6a264b8977ebdd5af3 299 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 5 64 1.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 6.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 156 175 6.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 135 143 6.7E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 156 175 2.3E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 2.3E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 9 26 2.3E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 177 194 2.3E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 209 229 2.3E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 129 145 2.3E-37 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 SMART SM00822 This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. 8 187 0.0012 T 28-03-2018 CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 14 246 5.8E-61 T 28-03-2018 CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 Gene3D G3DSA:3.40.50.720 1 41 6.1E-10 T 28-03-2018 CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 Gene3D G3DSA:3.40.50.720 42 247 2.4E-61 T 28-03-2018 CI104_RS24125 84ed045f309f76c0c9b9ec3c663aa2e3 247 SUPERFAMILY SSF51735 7 246 1.21E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04070 e7c84a07830a0a1ec68c94e27b1b07e4 328 Pfam PF04198 Putative sugar-binding domain 64 323 4.7E-82 T 28-03-2018 IPR007324 Sugar-binding domain, putative GO:0030246 CI104_RS04070 e7c84a07830a0a1ec68c94e27b1b07e4 328 Gene3D G3DSA:1.10.10.60 16 58 2.2E-12 T 28-03-2018 CI104_RS04070 e7c84a07830a0a1ec68c94e27b1b07e4 328 Gene3D G3DSA:3.40.50.1360 59 323 1.1E-31 T 28-03-2018 CI104_RS04070 e7c84a07830a0a1ec68c94e27b1b07e4 328 SUPERFAMILY SSF88659 21 53 6.54E-5 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS04070 e7c84a07830a0a1ec68c94e27b1b07e4 328 SUPERFAMILY SSF100950 66 323 1.84E-61 T 28-03-2018 CI104_RS09585 8ecb98345213a8009196be33bd2e93d8 149 Pfam PF07409 Phage protein GP46 29 138 4.7E-36 T 28-03-2018 IPR010877 Bacteriophage Mu, Gp46 CI104_RS06865 1a3939f0059a4dd3b56bbedd72df0ccc 99 SUPERFAMILY SSF47413 4 55 3.38E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS06865 1a3939f0059a4dd3b56bbedd72df0ccc 99 Gene3D G3DSA:1.10.260.40 1 99 5.8E-9 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 Pfam PF01202 Shikimate kinase 13 170 2.7E-56 T 28-03-2018 IPR031322 Shikimate kinase/gluconokinase KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 Gene3D G3DSA:3.40.50.300 1 173 5.6E-37 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 PRINTS PR01100 Shikimate kinase family signature 59 67 3.5E-29 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 PRINTS PR01100 Shikimate kinase family signature 98 115 3.5E-29 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 PRINTS PR01100 Shikimate kinase family signature 7 22 3.5E-29 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 PRINTS PR01100 Shikimate kinase family signature 31 44 3.5E-29 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 PRINTS PR01100 Shikimate kinase family signature 77 86 3.5E-29 T 28-03-2018 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 SUPERFAMILY SSF52540 4 170 9.58E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 ProSitePatterns PS01128 Shikimate kinase signature. 60 85 - T 28-03-2018 IPR023000 Shikimate kinase, conserved site KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS01790 4a9a7733a5f89a4dab87a39d42e7af14 173 Hamap MF_00109 Shikimate kinase [aroK]. 4 171 29.352 T 28-03-2018 IPR000623 Shikimate kinase/Threonine synthase-like 1 KEGG: 00400+2.7.1.71|MetaCyc: PWY-6163 CI104_RS26000 dc87914f48ccee9c1767fe038d2fba50 243 Pfam PF08378 Nuclease-related domain 33 142 3.0E-19 T 28-03-2018 IPR011528 Nuclease-related domain, NERD CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 SUPERFAMILY SSF74778 2 160 1.7E-69 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Pfam PF06434 Aconitate hydratase 2 N-terminus 168 382 6.4E-98 T 28-03-2018 IPR015929 Aconitase B, swivel GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Pfam PF11791 Aconitate B N-terminal domain 4 156 2.7E-68 T 28-03-2018 IPR015933 Aconitase B, HEAT-like domain GO:0003994|GO:0006099 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 PIRSF PIRSF036687 1 859 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Gene3D G3DSA:3.30.499.10 683 865 1.9E-54 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 ProSitePatterns PS01244 Aconitase family signature 2. 761 774 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Pfam PF00330 Aconitase family (aconitate hydratase) 472 818 1.3E-38 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 SUPERFAMILY SSF52016 162 371 1.07E-71 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Gene3D G3DSA:3.30.499.10 402 520 5.4E-10 T 28-03-2018 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 SUPERFAMILY SSF53732 379 859 3.14E-149 T 28-03-2018 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Gene3D G3DSA:3.40.1060.10 521 682 4.4E-26 T 28-03-2018 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 Gene3D G3DSA:3.20.19.10 162 363 2.9E-33 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 TIGRFAM TIGR00117 acnB: aconitate hydratase 2 1 854 0.0 T 28-03-2018 IPR004406 Aconitase B GO:0003994|GO:0005829|GO:0006099|GO:0051539 KEGG: 00020+4.2.1.3|KEGG: 00630+4.2.1.3|KEGG: 00640+4.2.1.99|KEGG: 00720+4.2.1.3|MetaCyc: PWY-5747 CI104_RS05035 1e48cae349db0641ba0c0e85b7c05f6a 865 ProSitePatterns PS00450 Aconitase family signature 1. 702 719 - T 28-03-2018 IPR018136 Aconitase family, 4Fe-4S cluster binding site KEGG: 00290+4.2.1.33 CI104_RS07120 2beb71c9901caef07eac26b184af24ee 412 Gene3D G3DSA:1.20.1250.20 207 411 4.5E-21 T 28-03-2018 CI104_RS07120 2beb71c9901caef07eac26b184af24ee 412 SUPERFAMILY SSF103473 16 407 5.23E-34 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS07120 2beb71c9901caef07eac26b184af24ee 412 Gene3D G3DSA:1.20.1250.20 14 202 3.3E-9 T 28-03-2018 CI104_RS07120 2beb71c9901caef07eac26b184af24ee 412 Pfam PF03825 Nucleoside H+ symporter 21 409 1.4E-99 T 28-03-2018 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 Pfam PF00334 Nucleoside diphosphate kinase 4 137 1.8E-53 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 SMART SM00562 3 140 1.5E-83 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 ProSitePatterns PS00469 Nucleoside diphosphate kinases active site. 114 122 - T 28-03-2018 IPR023005 Nucleoside diphosphate kinase, active site KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 Hamap MF_00451 Nucleoside diphosphate kinase [ndk]. 3 138 34.201 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 70 87 3.7E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 6 28 3.7E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 50 69 3.7E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 91 107 3.7E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 PRINTS PR01243 Nucleoside diphosphate kinase signature 114 133 3.7E-39 T 28-03-2018 IPR001564 Nucleoside diphosphate kinase GO:0004550|GO:0006165|GO:0006183|GO:0006228|GO:0006241 KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 Gene3D G3DSA:3.30.70.141 2 142 5.1E-52 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS18560 a2c4ed91bfdf1c4b764a371dd9b2b599 143 SUPERFAMILY SSF54919 1 140 1.31E-57 T 28-03-2018 IPR034907 Nucleoside diphosphate kinase-like domain KEGG: 00230+2.7.4.6|KEGG: 00240+2.7.4.6|MetaCyc: PWY-6545|MetaCyc: PWY-7176|MetaCyc: PWY-7184|MetaCyc: PWY-7187|MetaCyc: PWY-7197|MetaCyc: PWY-7198|MetaCyc: PWY-7205|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7221|MetaCyc: PWY-7222|MetaCyc: PWY-7224|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS26580 b90e4e91ae5bff51c4725a7ccae46518 135 Pfam PF13391 HNH endonuclease 55 85 3.6E-5 T 28-03-2018 IPR003615 HNH nuclease CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 TIGRFAM TIGR01703 hybrid_clust: hydroxylamine reductase 1 548 8.0E-231 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 SUPERFAMILY SSF56821 1 548 8.9E-189 T 28-03-2018 IPR011254 Prismane-like GO:0003824|GO:0016491|GO:0055114 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 Pfam PF03063 Prismane/CO dehydrogenase family 1 545 7.6E-155 T 28-03-2018 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase GO:0016491|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 Gene3D G3DSA:1.20.1270.20 150 232 6.1E-21 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 Hamap MF_00069 Hydroxylamine reductase [hcp]. 1 549 21.384 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 Gene3D G3DSA:1.20.1270.20 1 144 2.4E-35 T 28-03-2018 IPR016100 Prismane, alpha-bundle GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 PIRSF PIRSF000076 1 550 9.2E-239 T 28-03-2018 IPR010048 Hydroxylamine reductase GO:0005737|GO:0016661|GO:0051536|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 Gene3D G3DSA:3.40.50.2030 235 375 4.4E-63 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS08810 527914f2a6f5c274118dd522b44640e1 550 Gene3D G3DSA:3.40.50.2030 376 550 5.0E-59 T 28-03-2018 IPR016099 Prismane-like, alpha/beta-sandwich GO:0003824|GO:0055114 KEGG: 00910+1.7.99.1 CI104_RS14595 7613a7aec18e77c2d72c8d9366b598a6 703 Gene3D G3DSA:2.40.170.20 174 703 2.7E-77 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS14595 7613a7aec18e77c2d72c8d9366b598a6 703 Gene3D G3DSA:2.170.130.10 26 173 8.4E-25 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS14595 7613a7aec18e77c2d72c8d9366b598a6 703 SUPERFAMILY SSF56935 50 703 1.19E-120 T 28-03-2018 CI104_RS14595 7613a7aec18e77c2d72c8d9366b598a6 703 Pfam PF07715 TonB-dependent Receptor Plug Domain 58 160 1.3E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS14595 7613a7aec18e77c2d72c8d9366b598a6 703 Pfam PF00593 TonB dependent receptor 243 702 2.5E-54 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS14595 7613a7aec18e77c2d72c8d9366b598a6 703 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 60 703 1.3E-100 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS02680 bf11208b08bb4699540c4b2f000ba6d1 284 PIRSF PIRSF005052 1 284 2.4E-114 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CI104_RS02680 bf11208b08bb4699540c4b2f000ba6d1 284 Pfam PF03668 P-loop ATPase protein family 1 282 5.7E-147 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CI104_RS02680 bf11208b08bb4699540c4b2f000ba6d1 284 Gene3D G3DSA:3.40.50.300 1 152 7.4E-12 T 28-03-2018 CI104_RS02680 bf11208b08bb4699540c4b2f000ba6d1 284 Hamap MF_00636 RNase adapter protein RapZ [rapZ]. 1 281 41.056 T 28-03-2018 IPR005337 RapZ-like family GO:0005524 CI104_RS02680 bf11208b08bb4699540c4b2f000ba6d1 284 SUPERFAMILY SSF52540 2 151 1.73E-13 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25425 fd8e2d608b224f25fa2e979c8526b1a2 336 Pfam PF06834 TraU protein 32 331 5.2E-81 T 28-03-2018 IPR009649 TraU CI104_RS09260 648aa1a85579b967fe0b6daaa55cf323 209 PIRSF PIRSF028788 1 206 3.8E-56 T 28-03-2018 IPR026256 Transcriptional regulator, TfoX/Sxy-type CI104_RS09260 648aa1a85579b967fe0b6daaa55cf323 209 Pfam PF04994 TfoX C-terminal domain 116 194 5.3E-25 T 28-03-2018 IPR007077 TfoX, C-terminal CI104_RS09260 648aa1a85579b967fe0b6daaa55cf323 209 Gene3D G3DSA:3.30.1460.30 7 108 7.9E-18 T 28-03-2018 CI104_RS09260 648aa1a85579b967fe0b6daaa55cf323 209 SUPERFAMILY SSF159894 13 107 8.11E-27 T 28-03-2018 CI104_RS09260 648aa1a85579b967fe0b6daaa55cf323 209 Pfam PF04993 TfoX N-terminal domain 14 106 4.9E-24 T 28-03-2018 IPR007076 TfoX, N-terminal CI104_RS09260 648aa1a85579b967fe0b6daaa55cf323 209 Gene3D G3DSA:1.10.150.20 117 195 5.7E-20 T 28-03-2018 CI104_RS00060 297628adcc876f04a43b3b0d41a06b36 408 Gene3D G3DSA:2.140.10.30 146 400 3.1E-16 T 28-03-2018 CI104_RS00060 297628adcc876f04a43b3b0d41a06b36 408 Gene3D G3DSA:2.140.10.30 2 145 1.6E-8 T 28-03-2018 CI104_RS00060 297628adcc876f04a43b3b0d41a06b36 408 Pfam PF12566 Protein of unknown function (DUF3748) 63 179 2.8E-55 T 28-03-2018 IPR022223 Protein of unknown function DUF3748 CI104_RS00060 297628adcc876f04a43b3b0d41a06b36 408 SUPERFAMILY SSF69304 18 147 1.06E-19 T 28-03-2018 CI104_RS00060 297628adcc876f04a43b3b0d41a06b36 408 SUPERFAMILY SSF69304 307 404 1.06E-19 T 28-03-2018 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Hamap MF_01485 RecBCD enzyme subunit RecB [recB]. 6 1173 23.182 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Gene3D G3DSA:1.10.3170.10 155 349 1.5E-62 T 28-03-2018 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Pfam PF13361 UvrD-like helicase C-terminal domain 551 808 5.1E-17 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Gene3D G3DSA:3.90.320.10 889 1180 1.2E-85 T 28-03-2018 IPR011604 Exonuclease, phage-type/RecB, C-terminal GO:0003677|GO:0004518 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Gene3D G3DSA:3.40.50.300 444 590 6.8E-18 T 28-03-2018 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Gene3D G3DSA:3.40.50.300 599 876 8.3E-27 T 28-03-2018 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Pfam PF12705 PD-(D/E)XK nuclease superfamily 950 1155 1.0E-5 T 28-03-2018 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 Pfam PF00580 UvrD/REP helicase N-terminal domain 13 436 2.2E-64 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 SUPERFAMILY SSF52540 325 825 8.19E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 SUPERFAMILY SSF52540 16 80 8.19E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 SUPERFAMILY SSF52540 118 202 8.19E-106 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 SUPERFAMILY SSF52980 899 1174 1.88E-94 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS20315 c9345a95c09204e49da935e07c06950f 1181 TIGRFAM TIGR00609 recB: exodeoxyribonuclease V, beta subunit 8 1172 0.0 T 28-03-2018 IPR004586 RecBCD enzyme subunit RecB GO:0005524|GO:0006281|GO:0008854 CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 Pfam PF07702 UTRA domain 96 234 6.5E-32 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 SMART SM00866 96 235 5.7E-24 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 75 2.2E-21 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 SUPERFAMILY SSF46785 4 84 3.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 SUPERFAMILY SSF64288 65 238 4.08E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 49 65 5.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 35 49 5.8E-7 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 Gene3D G3DSA:1.10.10.10 3 77 2.1E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 Gene3D G3DSA:3.40.1410.10 78 238 2.3E-36 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS00375 500fd8bd7f713d10c746f704d1b5f69c 238 SMART SM00345 16 75 2.9E-20 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 SMART SM00882 15 253 2.2E-47 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 SUPERFAMILY SSF100950 284 524 5.23E-68 T 28-03-2018 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 Gene3D G3DSA:3.40.1080.10 283 531 1.1E-54 T 28-03-2018 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 Gene3D G3DSA:3.40.1080.10 2 276 3.2E-64 T 28-03-2018 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 PIRSF PIRSF000858 10 530 2.9E-206 T 28-03-2018 IPR014388 3-oxoacid CoA-transferase GO:0008410|GO:0046952 Reactome: R-HSA-77108 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 Pfam PF01144 Coenzyme A transferase 16 252 6.4E-54 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS12055 2873a5b887b10b3dee165e3a2c5f0372 531 SUPERFAMILY SSF100950 15 264 1.08E-78 T 28-03-2018 CI104_RS27045 f6a3a6ca98e7f393cd970eda8adb6c61 805 Gene3D G3DSA:2.60.40.1310 661 805 0.0021 T 28-03-2018 CI104_RS27045 f6a3a6ca98e7f393cd970eda8adb6c61 805 Gene3D G3DSA:2.60.40.1310 551 647 6.4E-5 T 28-03-2018 CI104_RS27045 f6a3a6ca98e7f393cd970eda8adb6c61 805 Gene3D G3DSA:2.60.40.1310 228 451 0.51 T 28-03-2018 CI104_RS27045 f6a3a6ca98e7f393cd970eda8adb6c61 805 Pfam PF12245 Bacterial Ig-like domain (group 3) 231 266 5.2E-11 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS27045 f6a3a6ca98e7f393cd970eda8adb6c61 805 Pfam PF13750 Bacterial Ig-like domain (group 3) 549 705 1.0E-39 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 Pfam PF03797 Autotransporter beta-domain 1152 1406 9.7E-50 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 TIGRFAM TIGR04393 rpt_T5SS_PEPC: T5SS/PEP-CTERM-associated repeat 179 217 4.8E-7 T 28-03-2018 IPR030895 T5SS/PEP-CTERM-associated repeat CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 SUPERFAMILY SSF51126 629 1097 2.35E-33 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 SMART SM00869 1149 1417 2.8E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 Gene3D G3DSA:2.160.20.20 490 1099 3.0E-37 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 Gene3D G3DSA:2.40.128.130 1107 1428 7.2E-52 T 28-03-2018 CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 990 1428 1.7E-117 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS11135 4c2163c693f762c4fc8a3e28b3d78fda 1428 SUPERFAMILY SSF103515 1115 1428 4.45E-50 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS16095 55d4008a0e028a0adce6dc3e3e22df5f 271 TIGRFAM TIGR01166 cbiO: cobalt ABC transporter, ATP-binding protein 12 199 4.9E-88 T 28-03-2018 IPR005876 Cobalt transport protein ATP-binding subunit GO:0006824 CI104_RS16095 55d4008a0e028a0adce6dc3e3e22df5f 271 Gene3D G3DSA:3.40.50.300 1 238 3.0E-59 T 28-03-2018 CI104_RS16095 55d4008a0e028a0adce6dc3e3e22df5f 271 SUPERFAMILY SSF52540 2 227 2.66E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16095 55d4008a0e028a0adce6dc3e3e22df5f 271 SMART SM00382 26 212 2.1E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS16095 55d4008a0e028a0adce6dc3e3e22df5f 271 Pfam PF00005 ABC transporter 17 165 2.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS16095 55d4008a0e028a0adce6dc3e3e22df5f 271 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 Hamap MF_01310 30S ribosomal protein S11 [rpsK]. 7 129 32.678 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 Pfam PF00411 Ribosomal protein S11 19 128 1.9E-54 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 ProSitePatterns PS00054 Ribosomal protein S11 signature. 97 119 - T 28-03-2018 IPR018102 Ribosomal S11, conserved site CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 TIGRFAM TIGR03632 uS11_bact: ribosomal protein uS11 10 126 3.0E-55 T 28-03-2018 IPR019981 Ribosomal protein S11, bacterial-type GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 PIRSF PIRSF002131 1 129 2.7E-53 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 Gene3D G3DSA:3.30.420.80 3 129 1.2E-44 T 28-03-2018 IPR001971 Ribosomal protein S11 GO:0003735|GO:0005840|GO:0006412 CI104_RS02160 b3f2d60e9479262be013fc0afb0be596 129 SUPERFAMILY SSF53137 14 129 6.08E-48 T 28-03-2018 CI104_RS08570 cfc72e630436dfcb0c7ed4dfd78a3530 321 Gene3D G3DSA:3.60.20.30 179 321 4.6E-52 T 28-03-2018 CI104_RS08570 cfc72e630436dfcb0c7ed4dfd78a3530 321 SUPERFAMILY SSF56235 4 309 3.09E-99 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS08570 cfc72e630436dfcb0c7ed4dfd78a3530 321 Pfam PF01112 Asparaginase 5 311 2.4E-118 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 CI104_RS10340 37e83977ab626c3782e8e0fe4712221f 190 Pfam PF01292 Prokaryotic cytochrome b561 9 180 7.2E-29 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CI104_RS10340 37e83977ab626c3782e8e0fe4712221f 190 SUPERFAMILY SSF81342 5 182 3.61E-38 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS10340 37e83977ab626c3782e8e0fe4712221f 190 Gene3D G3DSA:1.20.950.20 1 189 1.6E-34 T 28-03-2018 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 SMART SM00155 285 312 14.0 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 SMART SM00155 108 135 3.8E-8 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 SUPERFAMILY SSF56024 187 358 2.69E-36 T 28-03-2018 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 Gene3D G3DSA:3.30.870.10 193 363 2.7E-27 T 28-03-2018 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 Gene3D G3DSA:3.30.870.10 2 167 3.8E-31 T 28-03-2018 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 Pfam PF13091 PLD-like domain 26 162 1.3E-14 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 Pfam PF13091 PLD-like domain 214 335 6.0E-25 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 Hamap MF_01917 Cardiolipin synthase B [clsB]. 2 383 51.649 T 28-03-2018 IPR030872 Cardiolipin synthase B GO:0008808|GO:0032049 CI104_RS08340 ae87833c4f530fec7f619151b7dc6436 413 SUPERFAMILY SSF56024 4 162 3.36E-40 T 28-03-2018 CI104_RS16860 9b6deef7caea0b3b31c51a60b2920ae8 336 Pfam PF02653 Branched-chain amino acid transport system / permease component 41 325 7.6E-48 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS16860 9b6deef7caea0b3b31c51a60b2920ae8 336 Gene3D G3DSA:1.10.3470.10 34 331 2.6E-30 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 SMART SM00861 2 166 2.2E-36 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 SUPERFAMILY SSF52518 3 167 1.2E-43 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 ProSitePatterns PS00802 Transketolase signature 2. 109 125 - T 28-03-2018 IPR020826 Transketolase binding site KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 Pfam PF02780 Transketolase, C-terminal domain 180 297 4.7E-15 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 Gene3D G3DSA:3.40.50.920 178 304 3.5E-24 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 SUPERFAMILY SSF52922 181 302 3.27E-19 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 Pfam PF02779 Transketolase, pyrimidine binding domain 5 162 3.1E-26 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS08975 d709ecdf96bca56f96e9426d560c2cd4 305 Gene3D G3DSA:3.40.50.970 1 173 4.1E-38 T 28-03-2018 CI104_RS10950 d7498306ac3efb9ca47317d0cccdbcdc 285 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 83 281 5.4E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS10950 d7498306ac3efb9ca47317d0cccdbcdc 285 Gene3D G3DSA:1.10.3720.10 9 284 4.1E-42 T 28-03-2018 CI104_RS10950 d7498306ac3efb9ca47317d0cccdbcdc 285 SUPERFAMILY SSF161098 6 274 1.15E-52 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 SMART SM00528 87 135 2.4E-25 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 PIRSF PIRSF002096 1 135 5.7E-57 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 SUPERFAMILY SSF81273 2 58 5.1E-18 T 28-03-2018 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 SUPERFAMILY SSF81273 93 136 2.43E-12 T 28-03-2018 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 Gene3D G3DSA:4.10.430.10 93 135 2.0E-19 T 28-03-2018 IPR027444 Histone-like protein H-NS, C-terminal domain GO:0003677 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 Pfam PF00816 H-NS histone family 32 127 2.7E-20 T 28-03-2018 IPR001801 Histone-like protein H-NS GO:0003677|GO:0005622|GO:0006355 CI104_RS14305 b9966d53324e607b6dbaf3831baf110c 137 Gene3D G3DSA:1.10.287.1050 1 57 9.1E-26 T 28-03-2018 IPR027454 Histone-like protein H-NS family, oligomerisation domain GO:0046983 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 Pfam PF00248 Aldo/keto reductase family 8 250 2.7E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 PRINTS PR00069 Aldo-keto reductase signature 25 49 2.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 PRINTS PR00069 Aldo-keto reductase signature 81 99 2.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 PRINTS PR00069 Aldo-keto reductase signature 186 210 2.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 PRINTS PR00069 Aldo-keto reductase signature 149 178 2.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 PRINTS PR00069 Aldo-keto reductase signature 114 131 2.1E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 114 131 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 Gene3D G3DSA:3.20.20.100 1 262 3.8E-83 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 29 46 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 SUPERFAMILY SSF51430 2 257 2.62E-81 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS05485 ff55dfd04cb7f310bcc508ddd045f977 267 PIRSF PIRSF000097 1 264 1.8E-66 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Gene3D G3DSA:1.10.540.10 1 114 4.1E-19 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Hamap MF_01052 Crotonobetainyl-CoA dehydrogenase [caiA]. 1 380 92.087 T 28-03-2018 IPR023450 Crotonobetainyl-CoA reductase CaiA GO:0009437|GO:0016627|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 ProSitePatterns PS00072 Acyl-CoA dehydrogenases signature 1. 123 135 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 SUPERFAMILY SSF56645 1 227 3.8E-51 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 227 376 3.0E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 6 109 1.9E-14 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 PIRSF PIRSF016578 241 378 2.5E-8 T 28-03-2018 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 PIRSF PIRSF016578 7 84 2.2E-6 T 28-03-2018 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Gene3D G3DSA:1.20.140.10 216 380 8.5E-46 T 28-03-2018 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 ProSitePatterns PS00073 Acyl-CoA dehydrogenases signature 2. 334 353 - T 28-03-2018 IPR006089 Acyl-CoA dehydrogenase, conserved site GO:0003995|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 SUPERFAMILY SSF47203 226 379 1.93E-44 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 123 215 3.9E-21 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CI104_RS04650 77afa3efcca664036c37c4657ee4861b 380 Gene3D G3DSA:2.40.110.10 115 215 8.8E-24 T 28-03-2018 CI104_RS28685 676d387c513c34b36083373ea7fc7017 138 SUPERFAMILY SSF88723 3 136 3.08E-30 T 28-03-2018 IPR029060 PIN domain-like CI104_RS28685 676d387c513c34b36083373ea7fc7017 138 Pfam PF01850 PIN domain 5 129 4.2E-13 T 28-03-2018 IPR002716 PIN domain CI104_RS28685 676d387c513c34b36083373ea7fc7017 138 Gene3D G3DSA:3.40.50.1010 1 138 1.7E-25 T 28-03-2018 IPR029060 PIN domain-like CI104_RS28685 676d387c513c34b36083373ea7fc7017 138 Hamap MF_00265 tRNA(fMet)-specific endonuclease VapC [vapC]. 5 135 11.247 T 28-03-2018 IPR022907 VapC family GO:0004540 CI104_RS11485 3fc1421383a710534f8362508e0c895d 165 SUPERFAMILY SSF47240 3 159 1.64E-51 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS11485 3fc1421383a710534f8362508e0c895d 165 Gene3D G3DSA:1.20.1260.10 1 165 3.7E-28 T 28-03-2018 IPR012347 Ferritin-related CI104_RS11485 3fc1421383a710534f8362508e0c895d 165 Pfam PF05974 Domain of unknown function (DUF892) 6 163 1.9E-54 T 28-03-2018 IPR010287 Domain of unknown function DUF892 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 Hamap MF_00328 Guanylate kinase [gmk]. 2 187 38.417 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 Gene3D G3DSA:3.30.63.10 52 81 2.6E-27 T 28-03-2018 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 ProSitePatterns PS00856 Guanylate kinase-like signature. 40 57 - T 28-03-2018 IPR020590 Guanylate kinase, conserved site KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 Gene3D G3DSA:3.40.50.300 82 188 1.0E-36 T 28-03-2018 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 Gene3D G3DSA:3.40.50.300 1 51 2.7E-4 T 28-03-2018 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 SMART SM00072 3 187 4.6E-87 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 TIGRFAM TIGR03263 guanyl_kin: guanylate kinase 4 184 6.0E-76 T 28-03-2018 IPR017665 Guanylate kinase GO:0004385|GO:0006163 KEGG: 00230+2.7.4.8|MetaCyc: PWY-7221|Reactome: R-HSA-2161541|Reactome: R-HSA-499943 CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 Pfam PF00625 Guanylate kinase 5 186 5.6E-69 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CI104_RS00465 a174b5526ff6f9bfa110841b167e6264 207 SUPERFAMILY SSF52540 3 189 5.89E-72 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 TIGRFAM TIGR01245 trpD: anthranilate phosphoribosyltransferase 204 528 1.1E-128 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00097 Anthranilate synthase component II signature 4 18 2.0E-33 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00097 Anthranilate synthase component II signature 79 90 2.0E-33 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00097 Anthranilate synthase component II signature 166 179 2.0E-33 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00097 Anthranilate synthase component II signature 52 61 2.0E-33 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00097 Anthranilate synthase component II signature 124 136 2.0E-33 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00097 Anthranilate synthase component II signature 104 112 2.0E-33 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Hamap MF_00211 Anthranilate phosphoribosyltransferase [trpD]. 202 530 38.569 T 28-03-2018 IPR005940 Anthranilate phosphoribosyl transferase GO:0000162|GO:0004048 KEGG: 00400+2.4.2.18 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Gene3D G3DSA:3.40.50.880 1 192 6.8E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Pfam PF00117 Glutamine amidotransferase class-I 6 186 1.3E-43 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Pfam PF02885 Glycosyl transferase family, helical bundle domain 202 262 2.0E-14 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 SUPERFAMILY SSF52317 3 191 8.99E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 52 61 6.6E-13 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 166 179 6.6E-13 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00096 Glutamine amidotransferase superfamily signature 79 90 6.6E-13 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 TIGRFAM TIGR00566 trpG_papA: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 4 186 1.4E-54 T 28-03-2018 IPR006221 Anthranilate synthase/para-aminobenzoate synthase like domain GO:0008152 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Gene3D G3DSA:1.20.970.10 193 275 5.7E-16 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 79 95 7.3E-5 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 PRINTS PR00099 Carbamoyl-phosphate synthase protein GATase domain signature 49 63 7.3E-5 T 28-03-2018 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 SUPERFAMILY SSF47648 200 266 4.45E-16 T 28-03-2018 IPR017459 Glycosyl transferase family 3, N-terminal domain Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 SUPERFAMILY SSF52418 269 527 2.09E-90 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Gene3D G3DSA:3.40.1030.10 276 530 1.2E-90 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS14175 789edd9d46a6cd8cbf62e0beeea0ca61 531 Pfam PF00591 Glycosyl transferase family, a/b domain 273 521 6.3E-101 T 28-03-2018 IPR000312 Glycosyl transferase, family 3 GO:0008152|GO:0016757 Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS21720 b7f12e57e2f716b0c6d079635f29fffe 248 SUPERFAMILY SSF51366 17 240 2.62E-32 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS21720 b7f12e57e2f716b0c6d079635f29fffe 248 Pfam PF00834 Ribulose-phosphate 3 epimerase family 24 227 4.1E-33 T 28-03-2018 IPR000056 Ribulose-phosphate 3-epimerase-like GO:0005975|GO:0016857 KEGG: 00030+5.1.3.1|KEGG: 00040+5.1.3.1|KEGG: 00710+5.1.3.1|MetaCyc: PWY-1861|MetaCyc: PWY-5723|Reactome: R-HSA-71336 CI104_RS21720 b7f12e57e2f716b0c6d079635f29fffe 248 Gene3D G3DSA:3.20.20.70 8 244 2.5E-39 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS03400 6e894a162152625b6fd7d5efc5b25499 85 Gene3D G3DSA:1.20.1070.10 1 85 0.001 T 28-03-2018 CI104_RS19455 d0e77412ecbf9c60ecfd61e53646c742 500 SUPERFAMILY SSF55874 9 124 1.57E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS19455 d0e77412ecbf9c60ecfd61e53646c742 500 Gene3D G3DSA:3.30.565.10 9 208 1.6E-22 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS19455 d0e77412ecbf9c60ecfd61e53646c742 500 Pfam PF13589 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 23 161 2.3E-27 T 28-03-2018 CI104_RS00145 1d291f3ebf507c4732b67640339a1d80 277 SUPERFAMILY SSF103481 175 276 1.44E-12 T 28-03-2018 CI104_RS00145 1d291f3ebf507c4732b67640339a1d80 277 SUPERFAMILY SSF103481 39 136 3.14E-12 T 28-03-2018 CI104_RS00145 1d291f3ebf507c4732b67640339a1d80 277 Pfam PF00892 EamA-like transporter family 141 274 9.6E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS22755 7f45ad276d8d2fa8d88a8810b25e168f 323 Pfam PF00419 Fimbrial protein 185 321 1.1E-9 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22755 7f45ad276d8d2fa8d88a8810b25e168f 323 Gene3D G3DSA:2.60.40.1090 186 323 1.8E-9 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22755 7f45ad276d8d2fa8d88a8810b25e168f 323 SUPERFAMILY SSF49401 187 321 4.08E-9 T 28-03-2018 IPR008966 Adhesion domain CI104_RS28285 47c743d3204322ff4b1350793b8712c3 228 Gene3D G3DSA:1.10.10.10 73 212 3.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 Gene3D G3DSA:3.40.50.150 216 322 6.9E-10 T 28-03-2018 CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 ProSitePatterns PS00093 N-4 cytosine-specific DNA methylases signature. 235 240 - T 28-03-2018 IPR017985 DNA methylase, N-4 cytosine-specific, conserved site GO:0003677|GO:0015667|GO:0090124 KEGG: 00860+2.1.1.11|MetaCyc: PWY-5531|MetaCyc: PWY-7159 CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 Pfam PF01555 DNA methylase 30 73 7.7E-9 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 SUPERFAMILY SSF53335 11 82 4.12E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 SUPERFAMILY SSF53335 211 302 4.12E-20 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 ProSitePatterns PS01261 Uncharacterized protein family UPF0020 signature. 44 55 - T 28-03-2018 IPR000241 Putative RNA methylase domain KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825 CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 Gene3D G3DSA:3.40.50.150 6 109 4.0E-16 T 28-03-2018 CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 61 81 2.6E-6 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS09415 f35b2d62648d4ba54f49a50ece1aef62 361 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 38 56 2.6E-6 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS00740 9b76874b3e052bd7794f87c14bab27d2 463 TIGRFAM TIGR00474 selA: L-seryl-tRNA(Sec) selenium transferase 10 461 4.5E-188 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CI104_RS00740 9b76874b3e052bd7794f87c14bab27d2 463 Pfam PF03841 L-seryl-tRNA selenium transferase 83 451 7.8E-176 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CI104_RS00740 9b76874b3e052bd7794f87c14bab27d2 463 SUPERFAMILY SSF53383 74 461 1.3E-47 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS00740 9b76874b3e052bd7794f87c14bab27d2 463 Gene3D G3DSA:3.40.640.10 102 346 4.1E-32 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS00740 9b76874b3e052bd7794f87c14bab27d2 463 Pfam PF12390 Selenocysteine synthase N terminal 9 48 4.8E-9 T 28-03-2018 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CI104_RS00740 9b76874b3e052bd7794f87c14bab27d2 463 Hamap MF_00423 L-seryl-tRNA(Sec) selenium transferase [selA]. 1 463 252.224 T 28-03-2018 IPR004534 L-seryl-tRNA(Sec) selenium transferase GO:0001514|GO:0004125|GO:0005737 KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 PIRSF PIRSF000371 1 298 4.4E-93 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 2 290 3.7E-107 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 Pfam PF04055 Radical SAM superfamily 19 230 1.1E-30 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 Gene3D G3DSA:3.80.30.10 121 299 3.9E-28 T 28-03-2018 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 SUPERFAMILY SSF102114 125 264 1.71E-13 T 28-03-2018 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 Pfam PF13353 4Fe-4S single cluster domain 12 153 1.1E-9 T 28-03-2018 CI104_RS08550 3592f2d00fabac4490ae1afa43aad963 299 ProSitePatterns PS01087 Radical activating enzymes signature. 13 34 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CI104_RS11820 6ee20a789696b4c1f07f424c36eddf52 275 Hamap MF_00193 NH(3)-dependent NAD(+) synthetase [nadE]. 17 268 31.424 T 28-03-2018 IPR022926 NH(3)-dependent NAD(+) synthetase GO:0008795|GO:0009435 KEGG: 00760+6.3.1.5 CI104_RS11820 6ee20a789696b4c1f07f424c36eddf52 275 TIGRFAM TIGR00552 nadE: NAD+ synthetase 17 275 4.1E-82 T 28-03-2018 IPR003694 NAD(+) synthetase GO:0003952|GO:0005524|GO:0009435 KEGG: 00760+6.3.1.5|Reactome: R-HSA-196807 CI104_RS11820 6ee20a789696b4c1f07f424c36eddf52 275 Gene3D G3DSA:3.40.50.620 2 274 1.1E-59 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS11820 6ee20a789696b4c1f07f424c36eddf52 275 Pfam PF02540 NAD synthase 23 265 6.8E-77 T 28-03-2018 IPR022310 NAD/GMP synthase CI104_RS11820 6ee20a789696b4c1f07f424c36eddf52 275 SUPERFAMILY SSF52402 3 273 2.07E-85 T 28-03-2018 CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 Hamap MF_00133 Tryptophan synthase beta chain [trpB]. 2 391 49.208 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 52 374 3.0E-48 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 PIRSF PIRSF001413 2 397 6.0E-168 T 28-03-2018 IPR023026 Tryptophan synthase beta chain/beta chain-like GO:0000162|GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 SUPERFAMILY SSF53686 6 390 3.4E-141 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 ProSitePatterns PS00168 Tryptophan synthase beta chain pyridoxal-phosphate attachment site. 80 94 - T 28-03-2018 IPR006653 Tryptophan synthase, beta chain, conserved site GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 TIGRFAM TIGR00263 trpB: tryptophan synthase, beta subunit 8 389 1.3E-185 T 28-03-2018 IPR006654 Tryptophan synthase, beta chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 Gene3D G3DSA:3.40.50.1100 9 197 6.9E-43 T 28-03-2018 CI104_RS09835 45751c0b7ab96bc833142bd2f423e4b9 397 Gene3D G3DSA:3.40.50.1100 198 395 6.0E-37 T 28-03-2018 CI104_RS18910 0d3f4e04c0f3dc266e6bdced27268c1a 107 Pfam PF10043 Predicted periplasmic lipoprotein (DUF2279) 24 100 3.5E-10 T 28-03-2018 IPR018736 Protein of unknown function DUF2279, periplasmic lipoprotein CI104_RS18910 0d3f4e04c0f3dc266e6bdced27268c1a 107 PIRSF PIRSF034456 1 106 4.9E-57 T 28-03-2018 IPR017028 Uncharacterised conserved protein UCP034456 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 505 519 4.5E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 523 533 4.5E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 PRINTS PR00344 Bacterial sensor protein C-terminal signature 534 552 4.5E-7 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 Gene3D G3DSA:3.40.190.10 120 265 1.3E-16 T 28-03-2018 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 Gene3D G3DSA:1.10.287.130 337 417 5.5E-8 T 28-03-2018 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 SUPERFAMILY SSF47384 344 417 1.1E-8 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 SUPERFAMILY SSF55874 430 559 3.93E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 SMART SM00387 470 576 3.3E-15 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 Gene3D G3DSA:3.30.565.10 429 583 2.7E-24 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 475 557 4.7E-13 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 Pfam PF00512 His Kinase A (phospho-acceptor) domain 355 416 1.8E-7 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 SUPERFAMILY SSF53850 68 227 1.6E-14 T 28-03-2018 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 29 259 1.4E-31 T 28-03-2018 CI104_RS12220 078676267ac31b32d779d9b67bd886a2 590 SMART SM00388 354 423 8.5E-5 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS17915 c569167b10e8d3420ef98ab9f1ab9a95 219 ProSitePatterns PS00704 Prokaryotic-type carbonic anhydrases signature 1. 39 46 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS17915 c569167b10e8d3420ef98ab9f1ab9a95 219 ProSitePatterns PS00705 Prokaryotic-type carbonic anhydrases signature 2. 82 102 - T 28-03-2018 IPR015892 Carbonic anhydrase, prokaryotic-like, conserved site GO:0004089|GO:0008270|GO:0015976 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS17915 c569167b10e8d3420ef98ab9f1ab9a95 219 SMART SM00947 27 193 6.5E-64 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS17915 c569167b10e8d3420ef98ab9f1ab9a95 219 SUPERFAMILY SSF53056 2 205 4.97E-65 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS17915 c569167b10e8d3420ef98ab9f1ab9a95 219 Gene3D G3DSA:3.40.1050.10 1 217 1.0E-66 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS17915 c569167b10e8d3420ef98ab9f1ab9a95 219 Pfam PF00484 Carbonic anhydrase 34 188 1.5E-48 T 28-03-2018 IPR001765 Carbonic anhydrase GO:0004089|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117 CI104_RS24190 977e296c760c18b65ba353ee95893e11 316 Gene3D G3DSA:3.40.1190.20 6 311 9.3E-67 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS24190 977e296c760c18b65ba353ee95893e11 316 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 246 259 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS24190 977e296c760c18b65ba353ee95893e11 316 Pfam PF00294 pfkB family carbohydrate kinase 5 298 3.4E-58 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS24190 977e296c760c18b65ba353ee95893e11 316 SUPERFAMILY SSF53613 5 306 8.73E-77 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 SUPERFAMILY SSF51735 4 156 5.01E-36 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 SUPERFAMILY SSF55347 276 356 7.52E-24 T 28-03-2018 CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 SUPERFAMILY SSF55347 137 220 7.52E-24 T 28-03-2018 CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 Gene3D G3DSA:3.40.50.720 2 143 3.7E-34 T 28-03-2018 CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 Gene3D G3DSA:3.30.360.10 144 418 4.1E-52 T 28-03-2018 CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 141 221 7.7E-9 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS03090 3ae550147c21031d291561975eb55d5f 418 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 7 129 3.7E-20 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 SUPERFAMILY SSF46785 7 79 2.46E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 Pfam PF09339 IclR helix-turn-helix domain 9 58 5.1E-8 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 Pfam PF01614 Bacterial transcriptional regulator 122 247 2.8E-40 T 28-03-2018 IPR014757 Transcription regulator IclR, C-terminal CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 Gene3D G3DSA:3.30.450.40 85 255 3.4E-51 T 28-03-2018 IPR029016 GAF domain-like CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 Gene3D G3DSA:1.10.10.10 2 84 6.2E-8 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 SUPERFAMILY SSF55781 77 251 3.92E-49 T 28-03-2018 IPR029016 GAF domain-like CI104_RS17375 11c45c01575953b9ed46a5445d4ff6e0 260 SMART SM00346 7 95 1.3E-33 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 Gene3D G3DSA:2.60.40.10 150 243 3.0E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS22780 13809533b7257a654234dc0d16da4497 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS22780 13809533b7257a654234dc0d16da4497 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 145 3.0E-36 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 231 4.9E-14 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS22780 13809533b7257a654234dc0d16da4497 250 SUPERFAMILY SSF49354 28 145 1.75E-38 T 28-03-2018 IPR008962 PapD-like CI104_RS22780 13809533b7257a654234dc0d16da4497 250 PRINTS PR00969 Pili chaperone signature 165 180 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 PRINTS PR00969 Pili chaperone signature 28 37 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 PRINTS PR00969 Pili chaperone signature 104 121 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 PRINTS PR00969 Pili chaperone signature 74 95 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 PRINTS PR00969 Pili chaperone signature 127 142 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS22780 13809533b7257a654234dc0d16da4497 250 SUPERFAMILY SSF49584 154 244 2.35E-23 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS22780 13809533b7257a654234dc0d16da4497 250 Gene3D G3DSA:2.60.40.10 27 146 2.2E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS04255 83c700c06750f328eb3f793bbea78372 43 Pfam PF11036 Virulence promoting factor 1 43 5.1E-28 T 28-03-2018 IPR020196 Uncharacterised protein family YqgB CI104_RS04255 83c700c06750f328eb3f793bbea78372 43 ProDom PD050163 YQGB INNER MEMBRANE STY3241 1 42 1.0E-13 T 28-03-2018 IPR020196 Uncharacterised protein family YqgB CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 Pfam PF01479 S4 domain 97 143 7.3E-19 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 SUPERFAMILY SSF55174 3 206 2.09E-73 T 28-03-2018 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 TIGRFAM TIGR01017 rpsD_bact: ribosomal protein uS4 3 206 2.7E-87 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 ProSitePatterns PS00632 Ribosomal protein S4 signature. 94 118 - T 28-03-2018 IPR018079 Ribosomal protein S4, conserved site GO:0005622|GO:0019843 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6790901|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 Hamap MF_01306_B 30S ribosomal protein S4 [rpsD]. 1 206 36.37 T 28-03-2018 IPR005709 Ribosomal protein S4, bacterial-type GO:0003735|GO:0006412|GO:0015935 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 SMART SM01390 3 95 1.3E-49 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 Gene3D G3DSA:1.10.1050.10 145 206 7.9E-18 T 28-03-2018 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 SMART SM00363 96 160 8.2E-21 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 Gene3D G3DSA:1.10.1050.10 1 101 2.4E-41 T 28-03-2018 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 Pfam PF00163 Ribosomal protein S4/S9 N-terminal domain 3 95 1.7E-32 T 28-03-2018 IPR001912 Ribosomal protein S4/S9, N-terminal GO:0005622|GO:0019843 Reactome: R-HSA-6790901|Reactome: R-HSA-6791226 CI104_RS02165 80651f80fa5f50ccf533ac137a42bee0 206 Gene3D G3DSA:3.10.290.10 102 144 1.3E-15 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS23995 f024361080950da07019c0b7310c9191 292 PIRSF PIRSF000371 68 292 4.8E-72 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS23995 f024361080950da07019c0b7310c9191 292 PIRSF PIRSF000371 13 82 1.9E-27 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS23995 f024361080950da07019c0b7310c9191 292 TIGRFAM TIGR02494 PFLE_PFLC: glycyl-radical enzyme activating protein 83 284 4.7E-52 T 28-03-2018 IPR012839 Organic radical enzyme activase GO:0016491|GO:0055114 CI104_RS23995 f024361080950da07019c0b7310c9191 292 ProSitePatterns PS01087 Radical activating enzymes signature. 35 56 - T 28-03-2018 IPR001989 Radical-activating enzyme, conserved site GO:0016491|GO:0051539|GO:0055114 CI104_RS23995 f024361080950da07019c0b7310c9191 292 Pfam PF04055 Radical SAM superfamily 41 223 9.4E-23 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS23995 f024361080950da07019c0b7310c9191 292 Pfam PF13353 4Fe-4S single cluster domain 34 147 3.0E-11 T 28-03-2018 CI104_RS23995 f024361080950da07019c0b7310c9191 292 SUPERFAMILY SSF102114 99 287 1.12E-13 T 28-03-2018 CI104_RS23995 f024361080950da07019c0b7310c9191 292 SUPERFAMILY SSF102114 35 67 1.12E-13 T 28-03-2018 CI104_RS23995 f024361080950da07019c0b7310c9191 292 Gene3D G3DSA:3.20.20.70 9 291 4.7E-32 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS04810 e5e90ffdbde4ba128930ede9ae8b8e26 392 Gene3D G3DSA:1.20.1250.20 205 390 1.0E-21 T 28-03-2018 CI104_RS04810 e5e90ffdbde4ba128930ede9ae8b8e26 392 SUPERFAMILY SSF103473 13 388 1.1E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS04810 e5e90ffdbde4ba128930ede9ae8b8e26 392 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 17 391 1.3E-170 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CI104_RS04810 e5e90ffdbde4ba128930ede9ae8b8e26 392 Pfam PF07690 Major Facilitator Superfamily 19 344 4.8E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS04810 e5e90ffdbde4ba128930ede9ae8b8e26 392 Gene3D G3DSA:1.20.1250.20 11 203 3.9E-16 T 28-03-2018 CI104_RS21775 a7cd251801279ed96177b73255aa80a9 291 SUPERFAMILY SSF52540 25 208 5.89E-32 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21775 a7cd251801279ed96177b73255aa80a9 291 Gene3D G3DSA:3.40.50.300 49 245 5.2E-28 T 28-03-2018 CI104_RS21775 a7cd251801279ed96177b73255aa80a9 291 Pfam PF01926 50S ribosome-binding GTPase 39 151 8.1E-15 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS21775 a7cd251801279ed96177b73255aa80a9 291 TIGRFAM TIGR00231 small_GTP: small GTP-binding protein domain 35 166 2.4E-13 T 28-03-2018 IPR005225 Small GTP-binding protein domain GO:0005525 CI104_RS21775 a7cd251801279ed96177b73255aa80a9 291 Gene3D G3DSA:3.40.50.300 20 48 0.0042 T 28-03-2018 CI104_RS07490 1ef67a67c9f24c6c6f516dc99635800b 67 Hamap MF_00236 Sec-independent protein translocase protein TatA [tatA]. 1 67 21.061 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CI104_RS07490 1ef67a67c9f24c6c6f516dc99635800b 67 Hamap MF_00903 Probable Sec-independent protein translocase protein TatE [tatE]. 1 67 28.332 T 28-03-2018 IPR024905 Sec-independent protein translocase protein TatE CI104_RS07490 1ef67a67c9f24c6c6f516dc99635800b 67 TIGRFAM TIGR01411 tatAE: twin arginine-targeting protein translocase, TatA/E family 4 48 1.1E-20 T 28-03-2018 IPR006312 Sec-independent protein translocase protein TatA/E GO:0005886|GO:0008565|GO:0009306|GO:0015031|GO:0016021 CI104_RS07490 1ef67a67c9f24c6c6f516dc99635800b 67 Pfam PF02416 mttA/Hcf106 family 4 54 2.1E-12 T 28-03-2018 IPR003369 Sec-independent protein translocase protein TatA/B/E GO:0008565|GO:0015031 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 Pfam PF04055 Radical SAM superfamily 50 201 2.5E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 SUPERFAMILY SSF102114 6 313 1.14E-94 T 28-03-2018 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 SMART SM00876 220 312 6.3E-48 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 SMART SM00729 43 255 1.0E-41 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 Hamap MF_01694 Biotin synthase [bioB]. 5 313 41.783 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 Gene3D G3DSA:3.20.20.70 4 315 1.3E-59 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 TIGRFAM TIGR00433 bioB: biotin synthase 14 310 4.2E-125 T 28-03-2018 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB GO:0004076|GO:0009102 KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 Pfam PF06968 Biotin and Thiamin Synthesis associated domain 220 310 2.0E-20 T 28-03-2018 IPR010722 Biotin and thiamin synthesis-associated domain KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS08270 02f60669518ea7aeeab951c128358bf0 346 PIRSF PIRSF001619 1 319 5.6E-141 T 28-03-2018 IPR024177 Biotin synthase KEGG: 00780+2.8.1.6|MetaCyc: PWY-7380 CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 SUPERFAMILY SSF47616 81 211 5.4E-32 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 Gene3D G3DSA:1.20.1050.10 97 214 1.9E-27 T 28-03-2018 CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 TIGRFAM TIGR01262 maiA: maleylacetoacetate isomerase 2 211 6.5E-90 T 28-03-2018 IPR005955 Glutathione S-transferases, class Zeta GO:0003824|GO:0005737|GO:0009072 Reactome: R-HSA-156590|Reactome: R-HSA-71182 CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 Pfam PF14497 Glutathione S-transferase, C-terminal domain 118 199 8.1E-9 T 28-03-2018 IPR004046 Glutathione S-transferase, C-terminal CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 SUPERFAMILY SSF52833 1 88 1.78E-22 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 Gene3D G3DSA:3.40.30.10 1 96 4.0E-25 T 28-03-2018 CI104_RS16810 ea29fdfeb07e913d018e338026b70e05 214 Pfam PF13417 Glutathione S-transferase, N-terminal domain 3 80 2.0E-16 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS00130 7212093977a9555d60abc42889221201 318 Gene3D G3DSA:3.40.190.10 101 178 5.8E-12 T 28-03-2018 CI104_RS00130 7212093977a9555d60abc42889221201 318 Gene3D G3DSA:3.40.190.10 179 277 3.8E-19 T 28-03-2018 CI104_RS00130 7212093977a9555d60abc42889221201 318 Gene3D G3DSA:1.10.10.10 5 100 4.9E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00130 7212093977a9555d60abc42889221201 318 TIGRFAM TIGR02036 dsdC: D-serine deaminase transcriptional activator 8 308 2.2E-172 T 28-03-2018 IPR011781 D-serine deaminase transcriptional activator CI104_RS00130 7212093977a9555d60abc42889221201 318 SUPERFAMILY SSF53850 99 310 1.59E-32 T 28-03-2018 CI104_RS00130 7212093977a9555d60abc42889221201 318 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 18 76 2.4E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00130 7212093977a9555d60abc42889221201 318 Pfam PF03466 LysR substrate binding domain 99 307 9.6E-29 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS00130 7212093977a9555d60abc42889221201 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 43 8.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00130 7212093977a9555d60abc42889221201 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 43 53 8.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00130 7212093977a9555d60abc42889221201 318 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 53 64 8.8E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00130 7212093977a9555d60abc42889221201 318 SUPERFAMILY SSF46785 17 123 1.97E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 Hamap MF_00384 Homoserine kinase [thrB]. 2 307 30.863 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 Gene3D G3DSA:3.30.230.10 1 165 4.5E-28 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 TIGRFAM TIGR00191 thrB: homoserine kinase 2 308 5.8E-120 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 PRINTS PR00958 Homoserine kinase signature 175 192 2.9E-34 T 28-03-2018 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 PRINTS PR00958 Homoserine kinase signature 9 24 2.9E-34 T 28-03-2018 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 PRINTS PR00958 Homoserine kinase signature 254 269 2.9E-34 T 28-03-2018 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 PRINTS PR00958 Homoserine kinase signature 97 112 2.9E-34 T 28-03-2018 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 PRINTS PR00958 Homoserine kinase signature 137 150 2.9E-34 T 28-03-2018 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 Pfam PF00288 GHMP kinases N terminal domain 84 150 1.0E-13 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 PIRSF PIRSF000676 1 308 4.2E-85 T 28-03-2018 IPR000870 Homoserine kinase GO:0004413|GO:0005524|GO:0006566 KEGG: 00260+2.7.1.39|MetaCyc: PWY-702 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 ProSitePatterns PS00627 GHMP kinases putative ATP-binding domain. 90 101 - T 28-03-2018 IPR006203 GHMP kinase, ATP-binding, conserved site GO:0005524 CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 Gene3D G3DSA:3.30.70.890 168 309 1.4E-29 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 SUPERFAMILY SSF54211 1 160 9.87E-33 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 Pfam PF08544 GHMP kinases C terminal 214 282 1.0E-9 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS04470 837077b3bcb12e5802947d0e280844cf 309 SUPERFAMILY SSF55060 172 289 1.9E-33 T 28-03-2018 IPR013750 GHMP kinase, C-terminal domain CI104_RS08420 982f5e02a534287ee3b1f4e094b1b004 86 Gene3D G3DSA:3.30.1660.10 22 86 6.2E-22 T 28-03-2018 IPR025543 Dodecin-like CI104_RS08420 982f5e02a534287ee3b1f4e094b1b004 86 Pfam PF07338 Protein of unknown function (DUF1471) 34 86 4.7E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS08420 982f5e02a534287ee3b1f4e094b1b004 86 SUPERFAMILY SSF159871 3 86 4.05E-25 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 363 393 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 118 430 2.2E-26 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 SUPERFAMILY SSF53335 75 430 1.38E-89 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 Hamap MF_01010 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD [rlmD]. 18 432 64.88 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 Gene3D G3DSA:2.40.50.140 1 87 3.1E-29 T 28-03-2018 CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 414 424 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 SUPERFAMILY SSF50249 2 66 1.14E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 Gene3D G3DSA:3.40.50.150 88 431 1.5E-57 T 28-03-2018 CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 TIGRFAM TIGR00479 rumA: 23S rRNA (uracil-5-)-methyltransferase RumA 24 424 3.9E-157 T 28-03-2018 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD GO:0003723|GO:0006396|GO:0008173 CI104_RS20055 1975bd9023216055383f86a11cb3e0f9 433 Pfam PF01938 TRAM domain 11 66 1.3E-12 T 28-03-2018 IPR002792 TRAM domain CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 52 69 7.1E-72 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 75 98 7.1E-72 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 100 118 7.1E-72 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 26 47 7.1E-72 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 155 174 7.1E-72 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PRINTS PR01414 Cytochrome c-type biogenesis protein CcmB signature 192 215 7.1E-72 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 PIRSF PIRSF002764 1 219 2.5E-82 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 Pfam PF03379 CcmB protein 2 216 2.4E-91 T 28-03-2018 IPR003544 Cytochrome c-type biogenesis protein CcmB GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17140 567f4b3d8dd65b1661c1fede9d22c92c 219 TIGRFAM TIGR01190 ccmB: heme exporter protein CcmB 5 215 8.5E-95 T 28-03-2018 IPR026031 Cytochrome c-type biogenesis protein CcmB, bacteria CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 SUPERFAMILY SSF118215 13 393 4.45E-77 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 PRINTS PR00173 Glutamate-aspartate symporter signature 347 367 1.5E-8 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 PRINTS PR00173 Glutamate-aspartate symporter signature 285 311 1.5E-8 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 PRINTS PR00173 Glutamate-aspartate symporter signature 8 28 1.5E-8 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 PRINTS PR00173 Glutamate-aspartate symporter signature 183 202 1.5E-8 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 Pfam PF00375 Sodium:dicarboxylate symporter family 13 392 5.9E-78 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS21540 72daf94b7cfbb9a2f5a4586606ebd0af 412 Gene3D G3DSA:1.10.3860.10 1 400 1.9E-75 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08040 fee6760f3f8cd3c91721add7a0cbe6f0 379 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 1 379 2.8E-205 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS08040 fee6760f3f8cd3c91721add7a0cbe6f0 379 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 7 362 3.8E-111 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS08040 fee6760f3f8cd3c91721add7a0cbe6f0 379 PIRSF PIRSF000267 2 378 1.4E-134 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS23610 b19c1ccb2f46cbb666a1829de4d2f34f 574 Hamap MF_00747 Isocitrate dehydrogenase kinase/phosphatase [aceK]. 1 570 43.461 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CI104_RS23610 b19c1ccb2f46cbb666a1829de4d2f34f 574 ProDom PD043552 KINASE KINASE/PHOSPHATASE ISOCITRATE DEHYDROGENASE 3.1.3.- IDH TRANSFERASE IDHK/P HYDROLASE ENZYME 9 573 0.0 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CI104_RS23610 b19c1ccb2f46cbb666a1829de4d2f34f 574 PIRSF PIRSF000719 1 574 7.3E-295 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CI104_RS23610 b19c1ccb2f46cbb666a1829de4d2f34f 574 Pfam PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) 9 566 3.9E-245 T 28-03-2018 IPR010452 Isocitrate dehydrogenase kinasephosphatase GO:0005737|GO:0006006|GO:0008772|GO:0016791 CI104_RS02965 15594a4ea89cb095116130e9540ee385 147 Gene3D G3DSA:2.30.110.10 1 143 3.0E-13 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS02965 15594a4ea89cb095116130e9540ee385 147 PIRSF PIRSF009554 1 145 1.3E-58 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 CI104_RS02965 15594a4ea89cb095116130e9540ee385 147 Hamap MF_00764 UPF0306 protein YhbP [yhbP]. 3 140 35.148 T 28-03-2018 IPR011194 Uncharacterised protein family UPF0306 CI104_RS02965 15594a4ea89cb095116130e9540ee385 147 SUPERFAMILY SSF50475 3 136 6.98E-14 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS13065 d17098620f13d7dd0c4189964583020d 109 Pfam PF06411 HdeA/HdeB family 12 97 1.7E-21 T 28-03-2018 IPR010486 HNS-dependent expression A/B CI104_RS13065 d17098620f13d7dd0c4189964583020d 109 Gene3D G3DSA:1.10.890.10 28 101 1.4E-20 T 28-03-2018 CI104_RS13065 d17098620f13d7dd0c4189964583020d 109 ProDom PD070929 HDEB PRECURSOR SIGNAL EXPORTED PERIPLASMIC SECRETED ECS4389 10K-L SEQUENCING DIRECT 1 107 1.0E-48 T 28-03-2018 CI104_RS13065 d17098620f13d7dd0c4189964583020d 109 Hamap MF_00947 Acid stress chaperone HdeB [hdeB]. 2 104 27.765 T 28-03-2018 IPR028623 HNS-dependent expression B GO:0009268|GO:0051082 CI104_RS15140 c5d58ae70df02510cca9c2b0edba33b2 152 Pfam PF06173 Protein of unknown function (DUF986) 4 150 8.0E-63 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CI104_RS15140 c5d58ae70df02510cca9c2b0edba33b2 152 ProDom PD091196 MEMBRANE UPF0266 TRANSMEMBRANE INNER YOBD PLU2700 LMO0779 PM0830 YPO1755/Y2554/YP1637 LIN0773 22 148 2.0E-62 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CI104_RS15140 c5d58ae70df02510cca9c2b0edba33b2 152 Hamap MF_01071 UPF0266 membrane protein YobD [yobD]. 1 152 31.236 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CI104_RS15140 c5d58ae70df02510cca9c2b0edba33b2 152 PIRSF PIRSF020687 1 152 4.1E-67 T 28-03-2018 IPR009328 Protein of unknown function DUF986 CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 Gene3D G3DSA:3.40.50.970 2 180 2.4E-30 T 28-03-2018 CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 Pfam PF02779 Transketolase, pyrimidine binding domain 13 168 4.5E-19 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 Gene3D G3DSA:3.40.50.920 181 311 6.5E-34 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 SUPERFAMILY SSF52518 6 179 4.63E-39 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 Pfam PF02780 Transketolase, C-terminal domain 181 302 9.7E-27 T 28-03-2018 IPR033248 Transketolase, C-terminal domain CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 SMART SM00861 5 170 3.7E-29 T 28-03-2018 IPR005475 Transketolase-like, pyrimidine-binding domain CI104_RS07265 274d38ef3d7d6f9ba92ed7ee51ff65ff 311 SUPERFAMILY SSF52922 175 311 1.19E-31 T 28-03-2018 IPR009014 Transketolase C-terminal/Pyruvate-ferredoxin oxidoreductase domain II GO:0003824|GO:0008152 CI104_RS11065 a488647f05c756a93616769344a65a18 294 Pfam PF13730 Helix-turn-helix domain 24 70 7.7E-12 T 28-03-2018 CI104_RS11065 a488647f05c756a93616769344a65a18 294 SUPERFAMILY SSF46785 29 76 6.03E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS11065 a488647f05c756a93616769344a65a18 294 Pfam PF09524 Conserved phage C-terminus (Phg_2220_C) 183 255 7.3E-26 T 28-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CI104_RS11065 a488647f05c756a93616769344a65a18 294 TIGRFAM TIGR02220 phg_TIGR02220: phage conserved hypothetical protein, C-terminal domain 183 255 1.1E-19 T 28-03-2018 IPR011741 Phage conserved hypothetical protein, C-terminal CI104_RS11065 a488647f05c756a93616769344a65a18 294 Gene3D G3DSA:1.10.10.10 1 227 2.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 SUPERFAMILY SSF52540 4 50 6.81E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 SUPERFAMILY SSF52540 284 506 6.81E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 SUPERFAMILY SSF52540 1 217 4.62E-66 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 Pfam PF02463 RecF/RecN/SMC N terminal domain 1 510 3.1E-18 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 Gene3D G3DSA:3.40.50.300 1 533 1.0E-41 T 28-03-2018 CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 PIRSF PIRSF003128 1 553 2.2E-160 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CI104_RS19065 0fefcd5f2ebcfb21018dbedab23dc91f 553 TIGRFAM TIGR00634 recN: DNA repair protein RecN 1 552 2.1E-172 T 28-03-2018 IPR004604 DNA recombination/repair protein RecN GO:0005524|GO:0006281|GO:0006310 CI104_RS05730 56a1889cb226c4bb45489f8bdd8c6503 248 Gene3D G3DSA:3.90.1720.10 113 247 1.6E-31 T 28-03-2018 CI104_RS05730 56a1889cb226c4bb45489f8bdd8c6503 248 SUPERFAMILY SSF54001 118 243 6.38E-36 T 28-03-2018 CI104_RS05730 56a1889cb226c4bb45489f8bdd8c6503 248 Pfam PF00877 NlpC/P60 family 130 240 5.9E-30 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 Pfam PF00455 DeoR C terminal sensor domain 75 234 1.1E-48 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 SUPERFAMILY SSF46785 4 62 3.58E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.0E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.0E-6 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 Pfam PF08220 DeoR-like helix-turn-helix domain 6 60 1.5E-11 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 Gene3D G3DSA:3.40.50.1360 66 242 7.8E-34 T 28-03-2018 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 SMART SM01134 73 236 3.6E-63 T 28-03-2018 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 SMART SM00420 6 58 5.7E-13 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 SUPERFAMILY SSF100950 74 239 1.12E-26 T 28-03-2018 CI104_RS07955 9ea1b6aeb8f6e79a82793d0521c12ce3 268 Gene3D G3DSA:1.10.10.10 2 58 2.1E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22855 02bc995229f3ad21f2ff1340405c8b4c 383 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 39 377 1.7E-41 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS22855 02bc995229f3ad21f2ff1340405c8b4c 383 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 62 265 5.4E-18 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS22855 02bc995229f3ad21f2ff1340405c8b4c 383 Gene3D G3DSA:1.20.1600.10 26 373 3.6E-34 T 28-03-2018 CI104_RS22855 02bc995229f3ad21f2ff1340405c8b4c 383 SUPERFAMILY SSF111369 52 240 4.58E-23 T 28-03-2018 CI104_RS10200 2073303798781c8386c533f5f066ae4c 427 Pfam PF04261 Dyp-type peroxidase family 65 414 1.3E-116 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CI104_RS10200 2073303798781c8386c533f5f066ae4c 427 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 65 413 4.9E-104 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CI104_RS10200 2073303798781c8386c533f5f066ae4c 427 SUPERFAMILY SSF54909 58 420 3.58E-98 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS10200 2073303798781c8386c533f5f066ae4c 427 TIGRFAM TIGR01412 tat_substr_1: Tat-translocated enzyme 6 426 5.5E-181 T 28-03-2018 IPR006313 Deferrochelatase/peroxidase EfeB GO:0004601|GO:0015684|GO:0020037|GO:0033212 CI104_RS10200 2073303798781c8386c533f5f066ae4c 427 Pfam PF10518 TAT (twin-arginine translocation) pathway signal sequence 12 34 4.7E-5 T 28-03-2018 IPR019546 Twin-arginine translocation pathway, signal sequence, bacterial/archaeal CI104_RS22220 0f91865ccaaafd30863cdb176249ffbf 183 Hamap MF_00765 UPF0307 protein YjgA [yjgA]. 16 180 23.64 T 28-03-2018 IPR006839 Ribosome-associated, YjgA CI104_RS22220 0f91865ccaaafd30863cdb176249ffbf 183 Pfam PF04751 Protein of unknown function (DUF615) 26 176 1.2E-54 T 28-03-2018 IPR006839 Ribosome-associated, YjgA CI104_RS22220 0f91865ccaaafd30863cdb176249ffbf 183 Gene3D G3DSA:1.10.60.30 38 106 1.1E-22 T 28-03-2018 CI104_RS22220 0f91865ccaaafd30863cdb176249ffbf 183 Gene3D G3DSA:1.10.60.30 111 183 2.1E-28 T 28-03-2018 CI104_RS22220 0f91865ccaaafd30863cdb176249ffbf 183 SUPERFAMILY SSF158710 37 179 2.35E-50 T 28-03-2018 IPR023153 PSPTO4464-like domain CI104_RS22220 0f91865ccaaafd30863cdb176249ffbf 183 PIRSF PIRSF016183 10 183 8.3E-70 T 28-03-2018 IPR006839 Ribosome-associated, YjgA CI104_RS21285 a369b1fa89e191599d4dc13c66465b9f 240 SUPERFAMILY SSF46894 141 209 1.02E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS21285 a369b1fa89e191599d4dc13c66465b9f 240 Gene3D G3DSA:1.10.10.10 36 216 6.8E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21285 a369b1fa89e191599d4dc13c66465b9f 240 Pfam PF00196 Bacterial regulatory proteins, luxR family 154 207 7.6E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS21285 a369b1fa89e191599d4dc13c66465b9f 240 SMART SM00421 151 208 5.3E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 294 320 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 194 213 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 50 70 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 356 376 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 147 169 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 80 105 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 PRINTS PR00173 Glutamate-aspartate symporter signature 329 348 1.4E-37 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 Pfam PF00375 Sodium:dicarboxylate symporter family 6 402 1.4E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 Gene3D G3DSA:1.10.3860.10 1 407 6.7E-107 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS08000 3e1aa12e72ec92fd4d6157b054cd8075 435 SUPERFAMILY SSF118215 6 403 1.7E-105 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS06320 bd4f6800126985e46f943c79fb66d776 231 SUPERFAMILY SSF46785 8 75 6.54E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06320 bd4f6800126985e46f943c79fb66d776 231 Gene3D G3DSA:1.10.10.10 12 74 1.6E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06320 bd4f6800126985e46f943c79fb66d776 231 SUPERFAMILY SSF55781 89 227 3.73E-13 T 28-03-2018 IPR029016 GAF domain-like CI104_RS06320 bd4f6800126985e46f943c79fb66d776 231 Gene3D G3DSA:3.30.450.40 75 229 7.7E-13 T 28-03-2018 IPR029016 GAF domain-like CI104_RS06320 bd4f6800126985e46f943c79fb66d776 231 Pfam PF09339 IclR helix-turn-helix domain 10 60 1.2E-7 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS06320 bd4f6800126985e46f943c79fb66d776 231 SMART SM00346 8 90 0.0017 T 28-03-2018 IPR005471 Transcription regulator IclR, N-terminal GO:0003677|GO:0006355 CI104_RS03155 45b467a3bedd69a0e5cc72e7fb984ee8 443 TIGRFAM TIGR00814 stp: serine transporter 17 433 2.3E-171 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS03155 45b467a3bedd69a0e5cc72e7fb984ee8 443 Hamap MF_01583 Threonine/serine transporter TdcC [tdcC]. 1 443 57.115 T 28-03-2018 IPR023726 Threonine/serine transporter TdcC GO:0015565|GO:0015826|GO:0016021|GO:0022889|GO:0032329 CI104_RS03155 45b467a3bedd69a0e5cc72e7fb984ee8 443 Pfam PF03222 Tryptophan/tyrosine permease family 29 438 6.9E-8 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 Gene3D G3DSA:3.40.47.10 6 260 5.6E-81 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 SUPERFAMILY SSF53901 3 252 8.64E-77 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 155 171 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 SUPERFAMILY SSF53901 215 412 2.11E-73 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 TIGRFAM TIGR03150 fabF: beta-ketoacyl-acyl-carrier-protein synthase II 4 411 3.4E-195 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 PIRSF PIRSF000447 1 413 1.8E-202 T 28-03-2018 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 GO:0006633|GO:0016747 CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 369 4.5E-40 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 4 247 6.0E-64 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 SMART SM00825 Beta-ketoacyl synthase 6 413 9.7E-14 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CI104_RS10545 eadf8ccf80bfe14498b19dc8b971a284 413 Gene3D G3DSA:3.40.47.10 261 413 1.8E-52 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS20270 e10ea9b3b44b9b23f07587e68c951a3d 268 Pfam PF00899 ThiF family 20 260 1.9E-36 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CI104_RS20270 e10ea9b3b44b9b23f07587e68c951a3d 268 SUPERFAMILY SSF69572 10 259 1.83E-62 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CI104_RS20270 e10ea9b3b44b9b23f07587e68c951a3d 268 Gene3D G3DSA:3.40.50.720 3 266 2.2E-53 T 28-03-2018 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 TIGRFAM TIGR01068 thioredoxin: thioredoxin 45 138 1.1E-36 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 SUPERFAMILY SSF52833 24 138 7.88E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 ProSitePatterns PS00194 Thioredoxin family active site. 56 74 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 PIRSF PIRSF000077 36 139 1.7E-32 T 28-03-2018 IPR005746 Thioredoxin GO:0006662|GO:0015035|GO:0045454 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 PRINTS PR00421 Thioredoxin family signature 55 63 1.7E-9 T 28-03-2018 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 PRINTS PR00421 Thioredoxin family signature 103 114 1.7E-9 T 28-03-2018 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 PRINTS PR00421 Thioredoxin family signature 63 72 1.7E-9 T 28-03-2018 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 Pfam PF00085 Thioredoxin 37 137 5.7E-28 T 28-03-2018 IPR013766 Thioredoxin domain GO:0045454 CI104_RS18890 08767355c1d4ae2d2731ab46abb978c5 139 Gene3D G3DSA:3.40.30.10 33 139 2.5E-35 T 28-03-2018 CI104_RS01510 ea48bff6b98da8acb01a2897d30e0abc 345 Pfam PF02894 Oxidoreductase family, C-terminal alpha/beta domain 135 239 4.7E-15 T 28-03-2018 IPR004104 Oxidoreductase, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS01510 ea48bff6b98da8acb01a2897d30e0abc 345 Pfam PF01408 Oxidoreductase family, NAD-binding Rossmann fold 3 120 3.1E-26 T 28-03-2018 IPR000683 Oxidoreductase, N-terminal GO:0016491 CI104_RS01510 ea48bff6b98da8acb01a2897d30e0abc 345 Gene3D G3DSA:3.30.360.10 135 337 1.4E-31 T 28-03-2018 CI104_RS01510 ea48bff6b98da8acb01a2897d30e0abc 345 SUPERFAMILY SSF51735 3 158 1.71E-42 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01510 ea48bff6b98da8acb01a2897d30e0abc 345 Gene3D G3DSA:3.40.50.720 1 134 1.5E-30 T 28-03-2018 CI104_RS01510 ea48bff6b98da8acb01a2897d30e0abc 345 SUPERFAMILY SSF55347 130 271 5.89E-22 T 28-03-2018 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 Gene3D G3DSA:2.30.40.10 277 372 2.8E-10 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 SUPERFAMILY SSF51338 333 355 2.45E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 SUPERFAMILY SSF51338 21 85 2.45E-13 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 Hamap MF_01518 Adenine deaminase [ade]. 31 583 35.208 T 28-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 Pfam PF13382 Adenine deaminase C-terminal domain 434 579 2.3E-56 T 28-03-2018 IPR026912 Adenine deaminase C-terminal domain KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 Gene3D G3DSA:2.30.40.10 28 89 1.1E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 Gene3D G3DSA:3.20.20.140 90 268 6.8E-8 T 28-03-2018 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 TIGRFAM TIGR01178 ade: adenine deaminase 31 582 1.2E-227 T 28-03-2018 IPR006679 Adenine deaminase GO:0000034|GO:0006146 KEGG: 00230+3.5.4.2|MetaCyc: PWY-6610 CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 SUPERFAMILY SSF51556 85 333 2.18E-25 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS00215 0fdae05245c1b881c74a2ef066771e89 588 Pfam PF01979 Amidohydrolase family 82 362 4.2E-26 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS07590 a2ab888223427cca6838a86509efbc75 224 Gene3D G3DSA:1.10.3720.10 2 224 2.4E-40 T 28-03-2018 CI104_RS07590 a2ab888223427cca6838a86509efbc75 224 SUPERFAMILY SSF161098 14 210 6.67E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS07590 a2ab888223427cca6838a86509efbc75 224 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 13 118 7.5E-24 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS07590 a2ab888223427cca6838a86509efbc75 224 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 223 1.6E-17 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01310 d450b6d60cd8e5906c15a9c2d08a9685 453 Gene3D G3DSA:3.40.50.980 141 294 2.3E-17 T 28-03-2018 CI104_RS01310 d450b6d60cd8e5906c15a9c2d08a9685 453 Gene3D G3DSA:3.40.50.980 87 140 0.011 T 28-03-2018 CI104_RS01310 d450b6d60cd8e5906c15a9c2d08a9685 453 SUPERFAMILY SSF56801 15 451 2.88E-51 T 28-03-2018 CI104_RS01310 d450b6d60cd8e5906c15a9c2d08a9685 453 Gene3D G3DSA:3.40.50.980 4 86 1.9E-6 T 28-03-2018 CI104_RS01310 d450b6d60cd8e5906c15a9c2d08a9685 453 Pfam PF00501 AMP-binding enzyme 130 283 2.3E-8 T 28-03-2018 IPR000873 AMP-dependent synthetase/ligase GO:0003824|GO:0008152 CI104_RS01310 d450b6d60cd8e5906c15a9c2d08a9685 453 Gene3D G3DSA:3.30.300.30 343 453 2.3E-13 T 28-03-2018 CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 SUPERFAMILY SSF53218 8 168 5.76E-46 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 Gene3D G3DSA:3.40.980.10 3 170 4.6E-36 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 TIGRFAM TIGR00177 molyb_syn: molybdenum cofactor synthesis domain 12 153 2.5E-37 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 Pfam PF00994 Probable molybdopterin binding domain 14 156 1.2E-32 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 TIGRFAM TIGR02667 moaB_proteo: molybdenum cofactor biosynthesis protein B 7 169 6.5E-81 T 28-03-2018 IPR013484 Molybdenum cofactor biosynthesis protein B, proteobacteria GO:0006777 CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 SMART SM00852 14 158 2.4E-27 T 28-03-2018 IPR001453 MoaB/Mog domain CI104_RS08310 0a65a5381a937b0b6efecf1bf3cbc9f0 170 PIRSF PIRSF006443 1 166 5.3E-61 T 28-03-2018 IPR012245 Molybdenum cofactor biosynthesis protein MoaB GO:0006777 CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 SUPERFAMILY SSF52540 261 489 2.07E-44 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 Pfam PF00005 ABC transporter 23 174 7.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 Pfam PF00005 ABC transporter 275 429 6.2E-23 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 ProSitePatterns PS00211 ABC transporters family signature. 402 416 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 Gene3D G3DSA:3.40.50.300 256 495 3.7E-37 T 28-03-2018 CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 SUPERFAMILY SSF52540 7 234 1.84E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 Gene3D G3DSA:3.40.50.300 3 242 7.2E-51 T 28-03-2018 CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 SMART SM00382 283 478 0.028 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS18655 ce3f497abc3783ce1df38d39184080bf 502 SMART SM00382 32 222 2.3E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 ProSitePatterns PS01067 Protein secE/sec61-gamma signature. 71 99 - T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 TIGRFAM TIGR00964 secE_bact: preprotein translocase, SecE subunit 69 123 4.1E-17 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 Gene3D G3DSA:1.20.5.1030 68 119 1.6E-18 T 28-03-2018 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 PRINTS PR01650 Bacterial translocase SecE signature 65 85 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 PRINTS PR01650 Bacterial translocase SecE signature 109 125 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 PRINTS PR01650 Bacterial translocase SecE signature 89 109 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 PRINTS PR01650 Bacterial translocase SecE signature 44 65 1.0E-41 T 28-03-2018 IPR005807 SecE subunit of protein translocation complex GO:0009306|GO:0015450|GO:0016021 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 Pfam PF00584 SecE/Sec61-gamma subunits of protein translocation complex 70 122 3.9E-20 T 28-03-2018 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit GO:0006605|GO:0006886|GO:0016020 Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS23800 b49463c4e4d77cfb6069f64dc2122f21 127 Hamap MF_00422 Protein translocase subunit SecE [secE]. 67 121 13.188 T 28-03-2018 IPR022943 Preprotein translocase subunit SecE Reactome: R-HSA-1236974|Reactome: R-HSA-1799339|Reactome: R-HSA-381038 CI104_RS06925 04eeda7823dd56edb6bbff1a4f1c4b1d 259 TIGRFAM TIGR00245 TIGR00245: TIGR00245 family protein 6 251 1.0E-108 T 28-03-2018 IPR005226 UPF0014 family CI104_RS06925 04eeda7823dd56edb6bbff1a4f1c4b1d 259 Pfam PF03649 Uncharacterised protein family (UPF0014) 10 245 2.9E-82 T 28-03-2018 IPR005226 UPF0014 family CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 SUPERFAMILY SSF51905 394 459 3.17E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 SUPERFAMILY SSF51905 2 230 3.17E-36 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 SUPERFAMILY SSF56425 263 400 2.34E-24 T 28-03-2018 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 TIGRFAM TIGR02485 CobZ_N-term: precorrin 3B synthase CobZ 2 460 7.6E-205 T 28-03-2018 IPR012831 Precorrin 3B synthase CobZ CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 Pfam PF00890 FAD binding domain 3 431 2.7E-33 T 28-03-2018 IPR003953 FAD-dependent oxidoreductase 2, FAD binding domain Reactome: R-HSA-611105|Reactome: R-HSA-71403 CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 Gene3D G3DSA:3.90.700.10 254 398 6.0E-29 T 28-03-2018 CI104_RS07735 e5de7183bfa3fe83a2eba19a7f0d85fc 467 Gene3D G3DSA:3.50.50.60 1 206 4.2E-29 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS15900 a4637772f232c277b3c45b669c00e797 89 TIGRFAM TIGR01402 fliQ: flagellar biosynthetic protein FliQ 1 88 3.2E-34 T 28-03-2018 IPR006305 Flagellar biosynthesis protein FliQ GO:0016021|GO:0044780 CI104_RS15900 a4637772f232c277b3c45b669c00e797 89 Pfam PF01313 Bacterial export proteins, family 3 6 77 5.9E-30 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CI104_RS15900 a4637772f232c277b3c45b669c00e797 89 PIRSF PIRSF004669 1 89 1.3E-33 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CI104_RS15900 a4637772f232c277b3c45b669c00e797 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 18 39 3.0E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CI104_RS15900 a4637772f232c277b3c45b669c00e797 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 39 54 3.0E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CI104_RS15900 a4637772f232c277b3c45b669c00e797 89 PRINTS PR00952 Type III secretion system inner membrane Q protein family signature 54 76 3.0E-24 T 28-03-2018 IPR002191 Bacterial export protein family 3 GO:0009306|GO:0016020 CI104_RS00280 595e109af3f1e02b1770d65af50bab6f 138 Gene3D G3DSA:3.40.630.30 34 137 1.7E-14 T 28-03-2018 CI104_RS00280 595e109af3f1e02b1770d65af50bab6f 138 Pfam PF00583 Acetyltransferase (GNAT) family 28 115 5.7E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS00280 595e109af3f1e02b1770d65af50bab6f 138 SUPERFAMILY SSF55729 28 127 2.03E-19 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS02705 8b274b215182b92813600848359137ad 184 Pfam PF03968 OstA-like protein 37 149 1.9E-32 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CI104_RS02705 8b274b215182b92813600848359137ad 184 TIGRFAM TIGR03002 outer_YhbN_LptA: lipopolysaccharide transport periplasmic protein LptA 28 166 2.9E-52 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CI104_RS02705 8b274b215182b92813600848359137ad 184 Gene3D G3DSA:2.60.450.10 27 164 1.0E-28 T 28-03-2018 CI104_RS02705 8b274b215182b92813600848359137ad 184 Hamap MF_01914 Lipopolysaccharide export system protein LptA [lptA]. 7 167 27.166 T 28-03-2018 IPR014340 Lipopolysaccharide export system protein LptA GO:0001530|GO:0015920|GO:0042597 CI104_RS26175 a283f3f990a1933f77b8ac12496d85fe 307 Pfam PF13737 Transposase DDE domain 19 130 5.2E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS13010 a283f3f990a1933f77b8ac12496d85fe 307 Pfam PF13737 Transposase DDE domain 19 130 5.2E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS14140 a283f3f990a1933f77b8ac12496d85fe 307 Pfam PF13737 Transposase DDE domain 19 130 5.2E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS23205 a283f3f990a1933f77b8ac12496d85fe 307 Pfam PF13737 Transposase DDE domain 19 130 5.2E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 Hamap MF_00415 Flagellar L-ring protein [flgH]. 1 230 28.13 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 Pfam PF02107 Flagellar L-ring protein 47 231 7.0E-60 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 PRINTS PR01008 Flagellar L-ring protein signature 73 85 4.3E-36 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 PRINTS PR01008 Flagellar L-ring protein signature 172 188 4.3E-36 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 PRINTS PR01008 Flagellar L-ring protein signature 146 161 4.3E-36 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 PRINTS PR01008 Flagellar L-ring protein signature 193 207 4.3E-36 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS10455 43fd5c9256d89a81f6cf377393f96095 232 PRINTS PR01008 Flagellar L-ring protein signature 209 223 4.3E-36 T 28-03-2018 IPR000527 Flagellar L-ring protein GO:0003774|GO:0009427|GO:0071973 CI104_RS07420 292f7720bb33b556489cc57035310fb1 487 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 25 480 7.7E-170 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS07420 292f7720bb33b556489cc57035310fb1 487 Pfam PF00939 Sodium:sulfate symporter transmembrane region 6 486 4.6E-183 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS07420 292f7720bb33b556489cc57035310fb1 487 PIRSF PIRSF002457 1 487 4.9E-161 T 28-03-2018 IPR030676 Citrate carrier CitT-related CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 Gene3D G3DSA:2.60.40.10 620 817 5.5E-16 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 Pfam PF13550 Putative phage tail protein 343 503 3.5E-14 T 28-03-2018 IPR032876 Tip attachment protein J CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 SUPERFAMILY SSF49265 641 702 3.61E-6 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 Gene3D G3DSA:2.60.40.10 109 215 0.094 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 Pfam PF09327 Domain of unknown function (DUF1983) 905 984 7.3E-21 T 28-03-2018 IPR015406 Domain of unknown function DUF1983 CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 SMART SM00060 632 702 4.1 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 CI104_RS11335 8d913df1930223381e46b5aa3f7b48a9 1067 SMART SM00060 720 802 7.2 T 28-03-2018 IPR003961 Fibronectin type III GO:0005515 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 Gene3D G3DSA:3.40.50.2300 59 180 2.4E-34 T 28-03-2018 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 Gene3D G3DSA:1.10.260.40 5 58 6.6E-20 T 28-03-2018 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 SMART SM00354 6 76 1.3E-32 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 SUPERFAMILY SSF47413 5 64 5.09E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 SUPERFAMILY SSF53822 63 337 1.55E-51 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 ProSitePatterns PS00356 LacI-type HTH domain signature. 9 27 - T 28-03-2018 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 Pfam PF00356 Bacterial regulatory proteins, lacI family 8 53 2.8E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 Gene3D G3DSA:3.40.50.2300 181 330 1.5E-29 T 28-03-2018 CI104_RS12560 c543efce8e7f3137ad926927129c8d99 342 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 65 336 5.8E-83 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS15435 f29aa1c22309b15cba86c5461b4116b2 527 Gene3D G3DSA:1.20.1250.20 232 463 1.9E-10 T 28-03-2018 CI104_RS15435 f29aa1c22309b15cba86c5461b4116b2 527 Gene3D G3DSA:1.20.1250.20 2 222 1.7E-21 T 28-03-2018 CI104_RS15435 f29aa1c22309b15cba86c5461b4116b2 527 Pfam PF13347 MFS/sugar transport protein 13 451 3.6E-55 T 28-03-2018 CI104_RS15435 f29aa1c22309b15cba86c5461b4116b2 527 SUPERFAMILY SSF103473 10 445 3.01E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 Gene3D G3DSA:3.40.50.1000 3 30 0.12 T 28-03-2018 IPR023214 HAD-like domain CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 Gene3D G3DSA:1.10.150.240 31 81 1.3E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 91 191 1.2E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 135 151 2.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 7 18 2.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 104 117 2.5E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 SUPERFAMILY SSF56784 7 215 1.84E-47 T 28-03-2018 IPR023214 HAD-like domain CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 11 191 2.4E-21 T 28-03-2018 IPR023214 HAD-like domain CI104_RS11890 15d984fe4d2c7e7ee7f6460a4e095665 222 Gene3D G3DSA:3.40.50.1000 82 217 1.9E-25 T 28-03-2018 IPR023214 HAD-like domain CI104_RS25125 ba4664d9003eadeec5f5c6952f8390f8 330 Gene3D G3DSA:3.30.930.10 1 329 1.5E-39 T 28-03-2018 CI104_RS25125 ba4664d9003eadeec5f5c6952f8390f8 330 SUPERFAMILY SSF55681 7 326 1.35E-97 T 28-03-2018 CI104_RS25125 ba4664d9003eadeec5f5c6952f8390f8 330 Pfam PF03590 Aspartate-ammonia ligase 9 244 3.8E-93 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CI104_RS25125 ba4664d9003eadeec5f5c6952f8390f8 330 TIGRFAM TIGR00669 asnA: aspartate--ammonia ligase 1 330 6.4E-197 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CI104_RS25125 ba4664d9003eadeec5f5c6952f8390f8 330 PIRSF PIRSF001555 1 329 1.2E-150 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CI104_RS25125 ba4664d9003eadeec5f5c6952f8390f8 330 Hamap MF_00555 Aspartate--ammonia ligase [asnA]. 1 330 46.044 T 28-03-2018 IPR004618 Aspartate--ammonia ligase GO:0004071|GO:0005737|GO:0006529 KEGG: 00250+6.3.1.1|KEGG: 00460+6.3.1.1 CI104_RS28455 0ec0fa1a68e4e982fbc0ce5e2dc8f148 770 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 2.1E-122 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CI104_RS28455 0ec0fa1a68e4e982fbc0ce5e2dc8f148 770 Gene3D G3DSA:3.40.50.300 131 574 8.2E-39 T 28-03-2018 CI104_RS28455 0ec0fa1a68e4e982fbc0ce5e2dc8f148 770 Pfam PF12615 F sex factor protein N terminal 31 128 7.6E-30 T 28-03-2018 IPR022585 TraD coupling protein, N-terminal CI104_RS28455 0ec0fa1a68e4e982fbc0ce5e2dc8f148 770 SUPERFAMILY SSF52540 185 572 1.43E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28455 0ec0fa1a68e4e982fbc0ce5e2dc8f148 770 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 576 4.7E-240 T 28-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 SUPERFAMILY SSF57716 111 149 4.56E-10 T 28-03-2018 CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 Hamap MF_00926 RNA polymerase-binding transcription factor DksA [dksA]. 28 150 30.045 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 SUPERFAMILY SSF109635 9 109 3.01E-37 T 28-03-2018 CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 TIGRFAM TIGR02420 dksA: RNA polymerase-binding protein DksA 32 140 1.5E-51 T 28-03-2018 IPR012784 RNA polymerase-binding transcription factor DksA GO:0008270 CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 ProSitePatterns PS01102 Prokaryotic dksA C4-type zinc finger. 114 138 - T 28-03-2018 IPR020458 Zinc finger, DksA/TraR C4-type conserved site CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 Pfam PF01258 Prokaryotic dksA/traR C4-type zinc finger 110 143 2.4E-10 T 28-03-2018 IPR000962 Zinc finger, DksA/TraR C4-type GO:0008270 CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 PRINTS PR00618 DksA/TraR zinc finger signature 126 138 9.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CI104_RS05175 58eca3e6eb1f7d413173c829f86adbf7 151 PRINTS PR00618 DksA/TraR zinc finger signature 114 125 9.9E-5 T 28-03-2018 IPR020460 Zinc finger, DksA/TraR C4-type, bacteria CI104_RS25275 a8a802f0d44be64679e9db985d203e64 85 Pfam PF01809 Haemolytic domain 10 75 1.1E-30 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CI104_RS25275 a8a802f0d44be64679e9db985d203e64 85 TIGRFAM TIGR00278 TIGR00278: putative membrane protein insertion efficiency factor 12 77 6.1E-33 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CI104_RS25275 a8a802f0d44be64679e9db985d203e64 85 Hamap MF_00386 Putative membrane protein insertion efficiency factor [yidD]. 8 76 25.359 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CI104_RS25275 a8a802f0d44be64679e9db985d203e64 85 ProDom PD004225 UPF0161 ALPHA-HEMOLYSIN YIDD UNCHARACTERIZED CYTOSOLIC PRECURSOR SIGNAL YTJA RNPA SIMILAR 22 68 4.0E-21 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CI104_RS25275 a8a802f0d44be64679e9db985d203e64 85 SMART SM01234 8 75 2.7E-45 T 28-03-2018 IPR002696 Putative membrane protein insertion efficiency factor CI104_RS23920 285c989e580a6da74ae84d973ce4fee9 293 Gene3D G3DSA:3.20.20.150 1 288 3.0E-53 T 28-03-2018 CI104_RS23920 285c989e580a6da74ae84d973ce4fee9 293 Pfam PF01261 Xylose isomerase-like TIM barrel 23 234 2.1E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS23920 285c989e580a6da74ae84d973ce4fee9 293 SUPERFAMILY SSF51658 15 276 3.27E-55 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS23920 285c989e580a6da74ae84d973ce4fee9 293 TIGRFAM TIGR00542 hxl6Piso_put: putative hexulose-6-phosphate isomerase 3 283 1.9E-136 T 28-03-2018 IPR004560 L-ribulose-5-phosphate 3-epimerase GO:0005975|GO:0016861 KEGG: 00053+5.1.3.22|MetaCyc: PWY-6961 CI104_RS17905 542e110fbd120cfe2d0bef86f0c406f1 255 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 27 246 1.2E-60 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17905 542e110fbd120cfe2d0bef86f0c406f1 255 Gene3D G3DSA:3.40.190.10 14 147 1.1E-35 T 28-03-2018 CI104_RS17905 542e110fbd120cfe2d0bef86f0c406f1 255 SMART SM00062 25 248 1.1E-59 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17905 542e110fbd120cfe2d0bef86f0c406f1 255 SUPERFAMILY SSF53850 10 248 6.96E-66 T 28-03-2018 CI104_RS17905 542e110fbd120cfe2d0bef86f0c406f1 255 Gene3D G3DSA:3.40.190.10 153 252 1.3E-14 T 28-03-2018 CI104_RS17905 542e110fbd120cfe2d0bef86f0c406f1 255 SMART SM00079 25 247 1.7E-6 T 28-03-2018 IPR001320 Ionotropic glutamate receptor GO:0004970|GO:0016020 CI104_RS12800 2c93af425ae515dd607b4ea4cb6bb2b2 388 Gene3D G3DSA:3.40.710.10 41 382 6.9E-62 T 28-03-2018 CI104_RS12800 2c93af425ae515dd607b4ea4cb6bb2b2 388 SUPERFAMILY SSF56601 44 375 1.81E-63 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS12800 2c93af425ae515dd607b4ea4cb6bb2b2 388 Pfam PF00144 Beta-lactamase 46 373 4.9E-51 T 28-03-2018 IPR001466 Beta-lactamase-related CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 SUPERFAMILY SSF46894 118 217 2.24E-26 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 Pfam PF00486 Transcriptional regulatory protein, C terminal 145 216 2.3E-20 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 SMART SM00862 145 216 1.3E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 SUPERFAMILY SSF52172 1 132 3.13E-36 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 SMART SM00448 1 112 6.2E-36 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 Gene3D G3DSA:3.40.50.2300 1 119 3.2E-33 T 28-03-2018 CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 Pfam PF00072 Response regulator receiver domain 3 113 1.7E-25 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS23020 97892423691a41dc8a0f66bbef2d6af2 224 Gene3D G3DSA:1.10.10.10 120 223 1.7E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17600 5092001e0d8831919db347c8cb44e544 506 Pfam PF03606 C4-dicarboxylate anaerobic carrier 15 501 2.5E-158 T 28-03-2018 IPR018385 C4-dicarboxylate anaerobic carrier-like GO:0016021 CI104_RS20470 1410bc38e3fe1986c2c37eb2780e22f8 409 Pfam PF03222 Tryptophan/tyrosine permease family 16 400 1.5E-10 T 28-03-2018 IPR018227 Amino acid/polyamine transporter 2 GO:0003333 CI104_RS02210 8f401919380d01428307e4df4260a849 315 TIGRFAM TIGR00460 fmt: methionyl-tRNA formyltransferase 5 310 2.3E-124 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CI104_RS02210 8f401919380d01428307e4df4260a849 315 Pfam PF02911 Formyl transferase, C-terminal domain 207 304 7.8E-32 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS02210 8f401919380d01428307e4df4260a849 315 Gene3D G3DSA:3.40.50.170 2 209 2.3E-70 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS02210 8f401919380d01428307e4df4260a849 315 SUPERFAMILY SSF50486 208 309 2.35E-37 T 28-03-2018 IPR011034 Formyl transferase, C-terminal-like GO:0003824 CI104_RS02210 8f401919380d01428307e4df4260a849 315 Hamap MF_00182 Methionyl-tRNA formyltransferase [fmt]. 5 307 37.75 T 28-03-2018 IPR005794 Methionyl-tRNA formyltransferase GO:0004479|GO:0071951 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9|Reactome: R-HSA-5368286 CI104_RS02210 8f401919380d01428307e4df4260a849 315 ProSitePatterns PS00373 Phosphoribosylglycinamide formyltransferase active site. 136 159 - T 28-03-2018 IPR001555 Phosphoribosylglycinamide formyltransferase, active site KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS02210 8f401919380d01428307e4df4260a849 315 Gene3D G3DSA:3.10.25.10 210 313 1.6E-34 T 28-03-2018 IPR005793 Formyl transferase, C-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS02210 8f401919380d01428307e4df4260a849 315 Pfam PF00551 Formyl transferase 6 184 8.0E-56 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS02210 8f401919380d01428307e4df4260a849 315 SUPERFAMILY SSF53328 5 207 3.4E-68 T 28-03-2018 IPR002376 Formyl transferase, N-terminal GO:0009058|GO:0016742 KEGG: 00670+2.1.2.9|KEGG: 00970+2.1.2.9 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 174 186 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 94 455 4.6E-101 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 222 236 7.7E-14 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 276 289 7.7E-14 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 93 109 7.7E-14 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 ProSitePatterns PS00095 C-5 cytosine-specific DNA methylases C-terminal signature. 437 455 - T 28-03-2018 IPR031303 DNA methylase, C-5 cytosine-specific, conserved site KEGG: 00270+2.1.1.37 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 SUPERFAMILY SSF53335 92 457 5.32E-73 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 Gene3D G3DSA:3.40.50.150 82 311 5.3E-55 T 28-03-2018 CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 Pfam PF00145 C-5 cytosine-specific DNA methylase 92 455 7.0E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS26260 f1efb354ecee673c43bfe4b0d066b8c2 475 Gene3D G3DSA:3.90.120.10 312 443 3.3E-25 T 28-03-2018 CI104_RS17665 b908487616b7b5ccefb172401066fb23 169 Pfam PF13302 Acetyltransferase (GNAT) domain 8 141 3.3E-28 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS17665 b908487616b7b5ccefb172401066fb23 169 Gene3D G3DSA:3.40.630.30 1 169 2.4E-33 T 28-03-2018 CI104_RS17665 b908487616b7b5ccefb172401066fb23 169 SUPERFAMILY SSF55729 2 164 1.1E-39 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 SMART SM00418 6 84 1.2E-28 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 Gene3D G3DSA:1.10.10.10 4 105 1.4E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 41 56 1.1E-21 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 56 71 1.1E-21 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 8 23 1.1E-21 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 PRINTS PR00778 Bacterial regulatory protein ArsR family signature 28 39 1.1E-21 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 Pfam PF01022 Bacterial regulatory protein, arsR family 13 59 1.3E-15 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 ProSitePatterns PS00846 Bacterial regulatory proteins, arsR family signature. 30 48 - T 28-03-2018 IPR018334 ArsR-type transcription regulator, HTH motif GO:0003700|GO:0005622|GO:0006355 CI104_RS26190 f7f142a477387e2cc8d76b5b2908283f 106 SUPERFAMILY SSF46785 2 101 2.34E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 Pfam PF13419 Haloacid dehalogenase-like hydrolase 7 183 1.0E-22 T 28-03-2018 IPR023214 HAD-like domain CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 183 3.7E-12 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 Gene3D G3DSA:3.40.50.1000 77 218 3.0E-19 T 28-03-2018 IPR023214 HAD-like domain CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 Gene3D G3DSA:1.10.150.240 19 76 1.1E-18 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 4 15 7.8E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 129 145 7.8E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 97 110 7.8E-6 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS25230 d84e9fedf5937a2fdf0d0ca36cdd2775 221 SUPERFAMILY SSF56784 4 211 2.85E-46 T 28-03-2018 IPR023214 HAD-like domain CI104_RS04175 07f00a552041a754e38396aa7724aaef 378 Pfam PF04055 Radical SAM superfamily 11 179 1.1E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS04175 07f00a552041a754e38396aa7724aaef 378 TIGRFAM TIGR00539 hemN_rel: putative oxygen-independent coproporphyrinogen III oxidase 7 368 3.6E-140 T 28-03-2018 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related GO:0004109|GO:0005737|GO:0006779|GO:0055114 CI104_RS04175 07f00a552041a754e38396aa7724aaef 378 Gene3D G3DSA:3.20.20.70 4 317 9.5E-47 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS04175 07f00a552041a754e38396aa7724aaef 378 SMART SM00729 6 223 1.6E-53 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS04175 07f00a552041a754e38396aa7724aaef 378 SUPERFAMILY SSF102114 5 376 1.83E-107 T 28-03-2018 CI104_RS04175 07f00a552041a754e38396aa7724aaef 378 Pfam PF06969 HemN C-terminal domain 306 364 4.6E-8 T 28-03-2018 IPR010723 HemN, C-terminal CI104_RS12920 511e275d79683f61e6eee23d3cad090f 478 Pfam PF00990 Diguanylate cyclase, GGDEF domain 303 461 4.1E-40 T 28-03-2018 IPR000160 GGDEF domain CI104_RS12920 511e275d79683f61e6eee23d3cad090f 478 SUPERFAMILY SSF55073 308 462 3.27E-38 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS12920 511e275d79683f61e6eee23d3cad090f 478 TIGRFAM TIGR00254 GGDEF: diguanylate cyclase (GGDEF) domain 303 464 9.9E-38 T 28-03-2018 IPR000160 GGDEF domain CI104_RS12920 511e275d79683f61e6eee23d3cad090f 478 Gene3D G3DSA:3.30.70.270 296 469 1.0E-43 T 28-03-2018 CI104_RS12920 511e275d79683f61e6eee23d3cad090f 478 SMART SM00267 292 465 3.5E-52 T 28-03-2018 IPR000160 GGDEF domain CI104_RS09870 2ddb31ecf0e9fc27a59e2a6b3da4bf69 468 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 119 458 4.8E-116 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CI104_RS09870 2ddb31ecf0e9fc27a59e2a6b3da4bf69 468 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 5 94 5.6E-15 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS09870 2ddb31ecf0e9fc27a59e2a6b3da4bf69 468 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 4 86 3.8E-27 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CI104_RS09870 2ddb31ecf0e9fc27a59e2a6b3da4bf69 468 Pfam PF02378 Phosphotransferase system, EIIC 135 402 3.9E-17 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS09870 2ddb31ecf0e9fc27a59e2a6b3da4bf69 468 SUPERFAMILY SSF52794 2 99 5.93E-30 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS09870 2ddb31ecf0e9fc27a59e2a6b3da4bf69 468 Gene3D G3DSA:3.40.50.2300 2 99 6.8E-31 T 28-03-2018 CI104_RS19130 ee9c64b19ff81cf70b0081a01b47d35a 451 Gene3D G3DSA:3.90.350.10 141 364 6.3E-15 T 28-03-2018 IPR014736 Transposase, Tn5-like, core CI104_RS19130 ee9c64b19ff81cf70b0081a01b47d35a 451 SUPERFAMILY SSF53098 230 424 2.05E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS19130 ee9c64b19ff81cf70b0081a01b47d35a 451 Pfam PF13701 Transposase DDE domain group 1 15 445 4.5E-133 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS21395 282a10b3c7819d0742d92f6898809c45 95 Pfam PF04365 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 7 88 6.6E-24 T 28-03-2018 IPR007460 Ribonuclease toxin, BrnT, of type II toxin-antitoxin system CI104_RS10410 8ed5091fdd6d199ecf807dca5ba2463e 97 TIGRFAM TIGR03824 FlgM_jcvi: flagellar biosynthesis anti-sigma factor FlgM 1 89 9.1E-19 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CI104_RS10410 8ed5091fdd6d199ecf807dca5ba2463e 97 Pfam PF04316 Anti-sigma-28 factor, FlgM 40 87 1.4E-10 T 28-03-2018 IPR031316 Anti-sigma-28 factor FlgM, C-terminal CI104_RS10410 8ed5091fdd6d199ecf807dca5ba2463e 97 SUPERFAMILY SSF101498 2 88 3.66E-13 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CI104_RS10410 8ed5091fdd6d199ecf807dca5ba2463e 97 Gene3D G3DSA:1.10.287.1160 59 88 1.3E-10 T 28-03-2018 IPR007412 Anti-sigma-28 factor, FlgM GO:0045892 CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 SUPERFAMILY SSF51126 53 621 7.85E-24 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 SMART SM00869 687 941 1.0E-32 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 Gene3D G3DSA:2.160.20.20 220 621 5.3E-37 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 Gene3D G3DSA:2.160.20.20 45 219 7.9E-5 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 SUPERFAMILY SSF103515 663 951 1.83E-37 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 PRINTS PR01484 Pertactin virulence factor family signature 869 890 5.1E-9 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 PRINTS PR01484 Pertactin virulence factor family signature 822 839 5.1E-9 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 PRINTS PR01484 Pertactin virulence factor family signature 667 685 5.1E-9 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 PRINTS PR01484 Pertactin virulence factor family signature 907 932 5.1E-9 T 28-03-2018 IPR003991 Pertactin virulence factor family GO:0007155 CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 513 951 2.3E-106 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 Pfam PF03212 Pertactin 494 615 3.4E-38 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 Pfam PF03797 Autotransporter beta-domain 690 931 6.9E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS15975 3700281e54d11ab8eb7f5bd060138d55 951 Gene3D G3DSA:2.40.128.130 652 951 3.5E-43 T 28-03-2018 CI104_RS02995 b22e78696997e2e8ba12bc6531bfb753 131 Hamap MF_00048 UPF0102 protein YraN [yraN]. 16 128 23.746 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CI104_RS02995 b22e78696997e2e8ba12bc6531bfb753 131 SUPERFAMILY SSF52980 17 126 3.08E-23 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS02995 b22e78696997e2e8ba12bc6531bfb753 131 TIGRFAM TIGR00252 TIGR00252: TIGR00252 family protein 16 129 3.3E-53 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CI104_RS02995 b22e78696997e2e8ba12bc6531bfb753 131 Gene3D G3DSA:3.40.1350.10 22 131 7.6E-35 T 28-03-2018 CI104_RS02995 b22e78696997e2e8ba12bc6531bfb753 131 Pfam PF02021 Uncharacterised protein family UPF0102 24 114 4.5E-25 T 28-03-2018 IPR003509 Uncharacterised protein family UPF0102 CI104_RS08455 17896fa8aef7fdb73b8c140159408e38 219 Gene3D G3DSA:1.10.3720.10 1 218 1.9E-41 T 28-03-2018 CI104_RS08455 17896fa8aef7fdb73b8c140159408e38 219 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 217 1.0E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08455 17896fa8aef7fdb73b8c140159408e38 219 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 111 2.8E-30 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS08455 17896fa8aef7fdb73b8c140159408e38 219 SUPERFAMILY SSF161098 13 202 3.14E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 Gene3D G3DSA:3.40.50.720 396 560 5.5E-24 T 28-03-2018 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 Pfam PF02254 TrkA-N domain 402 512 1.9E-25 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 PRINTS PR00335 TrkA potassium uptake protein signature 458 468 2.0E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 PRINTS PR00335 TrkA potassium uptake protein signature 418 432 2.0E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 PRINTS PR00335 TrkA potassium uptake protein signature 401 415 2.0E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 PRINTS PR00335 TrkA potassium uptake protein signature 447 457 2.0E-8 T 28-03-2018 IPR006036 Potassium uptake protein TrkA GO:0005886|GO:0006813|GO:0015079 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 Pfam PF00999 Sodium/hydrogen exchanger family 11 375 1.1E-62 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 Gene3D G3DSA:1.20.91.10 232 311 3.1E-12 T 28-03-2018 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 285 5.9E-93 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 SUPERFAMILY SSF51735 401 529 9.88E-33 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS04695 d4f399340def0d166067b9984d5f4db3 620 Hamap MF_01413 Glutathione-regulated potassium-efflux system protein KefC [kefC]. 1 607 55.612 T 28-03-2018 IPR023941 Glutathione-regulated potassium-efflux system protein KefC GO:0005887|GO:0006813|GO:0015503|GO:0015643|GO:0019899|GO:0051595 CI104_RS24675 84c188ac152da2115de2481a4754af6e 260 Gene3D G3DSA:3.20.20.140 1 260 5.9E-82 T 28-03-2018 CI104_RS24675 84c188ac152da2115de2481a4754af6e 260 Hamap MF_00901 3'-5' ssDNA/RNA exonuclease TatD [tatD]. 1 259 64.282 T 28-03-2018 IPR024918 3'-5' ssDNA/RNA exonuclease TatD GO:0008408 CI104_RS24675 84c188ac152da2115de2481a4754af6e 260 SUPERFAMILY SSF51556 1 258 1.26E-84 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS24675 84c188ac152da2115de2481a4754af6e 260 PIRSF PIRSF005902 1 260 1.0E-76 T 28-03-2018 IPR001130 TatD family GO:0016788 CI104_RS24675 84c188ac152da2115de2481a4754af6e 260 Pfam PF01026 TatD related DNase 2 256 1.7E-69 T 28-03-2018 IPR001130 TatD family GO:0016788 CI104_RS24675 84c188ac152da2115de2481a4754af6e 260 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 189 205 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 ProSitePatterns PS00911 Dihydroorotate dehydrogenase signature 1. 80 99 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 TIGRFAM TIGR01036 pyrD_sub2: dihydroorotate dehydrogenase (fumarate) 3 336 4.4E-167 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 Gene3D G3DSA:3.20.20.70 1 336 2.2E-77 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 PIRSF PIRSF000164 11 336 3.1E-96 T 28-03-2018 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 GO:0004152|GO:0006222|GO:0055114 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 SUPERFAMILY SSF51395 1 334 2.67E-104 T 28-03-2018 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 Pfam PF01180 Dihydroorotate dehydrogenase 47 335 2.0E-92 T 28-03-2018 IPR005720 Dihydroorotate dehydrogenase domain GO:0005737|GO:0016627|GO:0055114 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 ProSitePatterns PS00912 Dihydroorotate dehydrogenase signature 2. 292 312 - T 28-03-2018 IPR001295 Dihydroorotate dehydrogenase, conserved site GO:0004152|GO:0006207|GO:0055114 Reactome: R-HSA-500753 CI104_RS09190 c0aa90d114a967279fb6ea9921c1123d 336 Hamap MF_00225 Dihydroorotate dehydrogenase (quinone) [pyrD]. 2 336 51.37 T 28-03-2018 IPR005719 Dihydroorotate dehydrogenase, class 2 GO:0004152|GO:0006207|GO:0016020|GO:0055114 KEGG: 00240+1.3.5.2|MetaCyc: PWY-5686|Reactome: R-HSA-500753 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 Gene3D G3DSA:3.50.50.60 168 370 5.7E-35 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 6 338 1.5E-70 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 SUPERFAMILY SSF51905 7 107 1.74E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 SUPERFAMILY SSF51905 225 352 1.74E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 Gene3D G3DSA:3.50.50.60 5 159 3.3E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 172 197 3.2E-8 T 28-03-2018 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 310 317 3.2E-8 T 28-03-2018 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 7 29 3.2E-8 T 28-03-2018 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 115 133 3.3E-15 T 28-03-2018 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 172 190 3.3E-15 T 28-03-2018 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 295 317 3.3E-15 T 28-03-2018 CI104_RS10615 2e6d056cbafb89e178e12b81525e159a 434 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 8 27 3.3E-15 T 28-03-2018 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 SUPERFAMILY SSF53223 10 161 4.75E-54 T 28-03-2018 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 SUPERFAMILY SSF51735 163 453 1.21E-86 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 Pfam PF01515 Phosphate acetyl/butaryl transferase 430 751 6.7E-102 T 28-03-2018 IPR002505 Phosphate acetyl/butaryl transferase GO:0008152|GO:0016746 KEGG: 00430+2.3.1.8|KEGG: 00620+2.3.1.8|KEGG: 00640+2.3.1.8|KEGG: 00680+2.3.1.8|KEGG: 00720+2.3.1.8|MetaCyc: PWY-1281|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497|MetaCyc: PWY-6637 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 SUPERFAMILY SSF53659 430 754 5.76E-93 T 28-03-2018 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 Gene3D G3DSA:3.40.50.10380 5 160 3.3E-36 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 Gene3D G3DSA:3.40.50.10750 573 727 6.9E-51 T 28-03-2018 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 Gene3D G3DSA:3.40.50.720 161 448 1.7E-84 T 28-03-2018 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 ProSitePatterns PS00331 Malic enzymes signature. 159 175 - T 28-03-2018 IPR015884 Malic enzyme, conserved site GO:0004471|GO:0055114 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 Pfam PF03949 Malic enzyme, NAD binding domain 165 360 2.8E-20 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 PIRSF PIRSF036684 1 758 0.0 T 28-03-2018 IPR012188 NAD(P)-dependent malic enzyme GO:0004470|GO:0006108|GO:0046872 KEGG: 00620+1.1.1.40|KEGG: 00710+1.1.1.40|MetaCyc: PWY-241|MetaCyc: PWY-7117 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 SMART SM00919 163 401 1.3E-143 T 28-03-2018 IPR012302 Malic enzyme, NAD-binding GO:0051287 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 SMART SM01274 18 151 2.3E-82 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CI104_RS18315 81f6ecc932f661400283eee957cb5c6a 759 Pfam PF00390 Malic enzyme, N-terminal domain 19 151 9.4E-29 T 28-03-2018 IPR012301 Malic enzyme, N-terminal domain GO:0004471|GO:0055114 CI104_RS08170 8ab4aa34436112e1df5e9307edd473b7 346 PIRSF PIRSF005096 2 346 2.1E-124 T 28-03-2018 IPR015443 Aldose 1-epimerase GO:0016853|GO:0019318 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CI104_RS08170 8ab4aa34436112e1df5e9307edd473b7 346 TIGRFAM TIGR02636 galM_Leloir: galactose mutarotase 12 343 9.9E-146 T 28-03-2018 IPR013458 Aldose 1-epimerase, bacterial GO:0004034|GO:0006012 KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CI104_RS08170 8ab4aa34436112e1df5e9307edd473b7 346 SUPERFAMILY SSF74650 5 343 3.58E-110 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS08170 8ab4aa34436112e1df5e9307edd473b7 346 ProSitePatterns PS00545 Aldose 1-epimerase putative active site. 171 180 - T 28-03-2018 IPR018052 Aldose 1-epimerase, conserved site KEGG: 00010+5.1.3.3|KEGG: 00052+5.1.3.3|MetaCyc: PWY-6317 CI104_RS08170 8ab4aa34436112e1df5e9307edd473b7 346 Pfam PF01263 Aldose 1-epimerase 17 342 5.6E-91 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CI104_RS08170 8ab4aa34436112e1df5e9307edd473b7 346 Gene3D G3DSA:2.70.98.10 7 345 7.9E-106 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS14730 1e2f519a76d987e57e3a685f8d10600e 141 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 10 138 6.2E-28 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CI104_RS22165 ac6da12e88b0f903a3f4e8e59e572443 214 TIGRFAM TIGR03579 EF_0833: conserved hypothetical protein EF_0833/AHA_3914 5 213 4.2E-119 T 28-03-2018 IPR025456 Protein of unknown function DUF4310 CI104_RS22165 ac6da12e88b0f903a3f4e8e59e572443 214 Pfam PF14187 Domain of unknown function (DUF4310) 4 211 8.5E-108 T 28-03-2018 IPR025456 Protein of unknown function DUF4310 CI104_RS18550 4eaf3cf84a37a0a7903382641bca2ecf 330 Gene3D G3DSA:1.10.260.40 2 96 1.1E-13 T 28-03-2018 CI104_RS18550 4eaf3cf84a37a0a7903382641bca2ecf 330 Hamap MF_02017 Cytoskeleton protein RodZ [rodZ]. 1 325 44.39 T 28-03-2018 IPR023690 Cytoskeleton protein RodZ GO:0008360|GO:0016021 CI104_RS18550 4eaf3cf84a37a0a7903382641bca2ecf 330 SUPERFAMILY SSF47413 14 80 2.95E-8 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS18550 4eaf3cf84a37a0a7903382641bca2ecf 330 Pfam PF13413 Helix-turn-helix domain 18 78 6.3E-15 T 28-03-2018 CI104_RS18550 4eaf3cf84a37a0a7903382641bca2ecf 330 Pfam PF13464 Domain of unknown function (DUF4115) 248 322 2.5E-23 T 28-03-2018 IPR025194 Domain of unknown function DUF4115 CI104_RS18550 4eaf3cf84a37a0a7903382641bca2ecf 330 SMART SM00530 18 79 9.0E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS23175 b16645e98587711d1cdf6261ae48765a 318 TIGRFAM TIGR03148 cyt_nit_nrfD: cytochrome c nitrite reductase, NrfD subunit 5 318 1.7E-143 T 28-03-2018 IPR017566 NrfD CI104_RS23175 b16645e98587711d1cdf6261ae48765a 318 Pfam PF03916 Polysulphide reductase, NrfD 6 318 4.6E-101 T 28-03-2018 IPR005614 NrfD family CI104_RS23175 b16645e98587711d1cdf6261ae48765a 318 Gene3D G3DSA:1.20.1630.10 6 318 8.5E-56 T 28-03-2018 CI104_RS17615 c2434f47208e8cbe0010aaad033d355f 463 Pfam PF03611 PTS system sugar-specific permease component 12 408 2.0E-150 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CI104_RS25010 a634f7d751db38b17a450ee1922a14f2 87 Gene3D G3DSA:3.30.70.260 1 79 3.1E-7 T 28-03-2018 CI104_RS25010 a634f7d751db38b17a450ee1922a14f2 87 SUPERFAMILY SSF55021 3 75 2.29E-11 T 28-03-2018 CI104_RS25010 a634f7d751db38b17a450ee1922a14f2 87 Pfam PF13710 ACT domain 13 73 1.1E-26 T 28-03-2018 CI104_RS08545 743a680218ad9f82318e319f01def59e 810 TIGRFAM TIGR01774 PFL2-3: glycyl radical enzyme, PFL2/glycerol dehydratase family 8 810 0.0 T 28-03-2018 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS08545 743a680218ad9f82318e319f01def59e 810 Gene3D G3DSA:3.20.70.20 9 810 2.3E-276 T 28-03-2018 CI104_RS08545 743a680218ad9f82318e319f01def59e 810 ProSitePatterns PS00850 Glycine radical domain signature. 781 789 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CI104_RS08545 743a680218ad9f82318e319f01def59e 810 PIRSF PIRSF000379 34 810 8.9E-197 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS08545 743a680218ad9f82318e319f01def59e 810 Pfam PF02901 Pyruvate formate lyase-like 10 671 2.3E-212 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CI104_RS08545 743a680218ad9f82318e319f01def59e 810 Pfam PF01228 Glycine radical 688 791 3.6E-30 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CI104_RS08545 743a680218ad9f82318e319f01def59e 810 SUPERFAMILY SSF51998 5 808 7.02E-231 T 28-03-2018 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 SUPERFAMILY SSF51735 91 241 1.5E-32 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 SUPERFAMILY SSF52283 4 109 4.04E-18 T 28-03-2018 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 ProSitePatterns PS00065 D-isomer specific 2-hydroxyacid dehydrogenases NAD-binding signature. 119 146 - T 28-03-2018 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 Pfam PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain 110 246 3.1E-30 T 28-03-2018 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain GO:0051287|GO:0055114 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 ProSitePatterns PS00671 D-isomer specific 2-hydroxyacid dehydrogenases signature 3. 197 213 - T 28-03-2018 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 Hamap MF_01825 Erythronate-4-phosphate dehydrogenase [pdxB]. 1 357 47.225 T 28-03-2018 IPR020921 Erythronate-4-phosphate dehydrogenase GO:0005737|GO:0008615|GO:0033711|GO:0055114 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 Gene3D G3DSA:3.40.50.720 1 104 1.8E-21 T 28-03-2018 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 Gene3D G3DSA:3.40.50.720 105 257 1.6E-29 T 28-03-2018 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 Pfam PF11890 Domain of unknown function (DUF3410) 289 369 6.0E-27 T 28-03-2018 IPR024531 Erythronate-4-phosphate dehydrogenase, dimerisation domain GO:0046983 KEGG: 00260+1.1.1.29|KEGG: 00630+1.1.1.29|KEGG: 00680+1.1.1.29|KEGG: 00750+1.1.1.290|MetaCyc: PWY-181 CI104_RS17745 838dc9766d654f252deb1200cdc61aa3 378 Pfam PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain 6 281 2.1E-18 T 28-03-2018 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain GO:0008152|GO:0016616|GO:0051287|GO:0055114 CI104_RS06600 190d76359b47a98768c3f6af4abc6efc 53 Pfam PF10689 Protein of unknown function (DUF2496) 2 44 3.0E-24 T 28-03-2018 IPR019630 Protein of unknown function DUF2496, YbaM-related CI104_RS24310 be2a8bbc38d3fc4f27e00dbbfb039d5c 104 TIGRFAM TIGR02625 YiiL_rotase: L-rhamnose mutarotase 3 104 9.4E-56 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CI104_RS24310 be2a8bbc38d3fc4f27e00dbbfb039d5c 104 Pfam PF05336 L-rhamnose mutarotase 3 103 8.0E-28 T 28-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 CI104_RS24310 be2a8bbc38d3fc4f27e00dbbfb039d5c 104 SUPERFAMILY SSF54909 1 103 7.66E-36 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS24310 be2a8bbc38d3fc4f27e00dbbfb039d5c 104 Hamap MF_01663 L-rhamnose mutarotase [rhaM]. 1 104 31.589 T 28-03-2018 IPR013448 L-rhamnose mutarotase GO:0005737|GO:0016857|GO:0019299 CI104_RS24310 be2a8bbc38d3fc4f27e00dbbfb039d5c 104 Gene3D G3DSA:3.30.70.100 2 100 2.3E-4 T 28-03-2018 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 Gene3D G3DSA:2.40.50.100 212 357 3.0E-4 T 28-03-2018 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 Gene3D G3DSA:2.40.50.100 63 155 3.7E-13 T 28-03-2018 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 12 367 1.3E-12 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 SUPERFAMILY SSF111369 59 118 9.68E-14 T 28-03-2018 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 SUPERFAMILY SSF111369 198 266 9.68E-14 T 28-03-2018 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 SUPERFAMILY SSF111369 147 165 9.68E-14 T 28-03-2018 CI104_RS00730 469720d80a9dac8e21de6507c0533c66 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 66 301 8.6E-9 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS13505 89abd9d880135250b9ef348a1b0f4e2d 437 Pfam PF03611 PTS system sugar-specific permease component 4 385 8.3E-67 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CI104_RS13505 89abd9d880135250b9ef348a1b0f4e2d 437 PIRSF PIRSF006304 1 437 5.1E-159 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CI104_RS13505 89abd9d880135250b9ef348a1b0f4e2d 437 TIGRFAM TIGR00827 EIIC-GAT: PTS system, galactitol-specific IIC component 5 410 1.1E-210 T 28-03-2018 IPR013853 Galactitol permease IIC component GO:0015577|GO:0015796 CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 SUPERFAMILY SSF141523 376 429 3.79E-20 T 28-03-2018 CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 SUPERFAMILY SSF141523 485 534 3.79E-20 T 28-03-2018 CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 Pfam PF01471 Putative peptidoglycan binding domain 316 349 3.9E-6 T 28-03-2018 IPR002477 Peptidoglycan binding-like CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 SUPERFAMILY SSF47090 236 271 2.04E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 SUPERFAMILY SSF47090 315 357 2.04E-11 T 28-03-2018 IPR002477 Peptidoglycan binding-like CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 Gene3D G3DSA:1.10.101.10 237 354 1.0E-20 T 28-03-2018 IPR002477 Peptidoglycan binding-like CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 Gene3D G3DSA:2.40.440.10 375 554 1.1E-23 T 28-03-2018 CI104_RS09120 fa623140c5a35e436de0ca14a3853d21 616 Pfam PF03734 L,D-transpeptidase catalytic domain 378 544 8.8E-31 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 SMART SM00257 45 91 3.5E-7 T 28-03-2018 IPR018392 LysM domain CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 Gene3D G3DSA:2.40.440.10 97 242 4.3E-29 T 28-03-2018 CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 Gene3D G3DSA:3.10.350.10 43 92 1.4E-8 T 28-03-2018 CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 Pfam PF01476 LysM domain 46 91 2.0E-7 T 28-03-2018 IPR018392 LysM domain CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 SUPERFAMILY SSF141523 101 240 4.58E-28 T 28-03-2018 CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 SUPERFAMILY SSF54106 47 91 8.24E-5 T 28-03-2018 IPR018392 LysM domain CI104_RS10900 a5f8696299b037b8b025b6d4749f0e04 321 Pfam PF03734 L,D-transpeptidase catalytic domain 103 240 3.3E-19 T 28-03-2018 IPR005490 L,D-transpeptidase catalytic domain GO:0016740 CI104_RS20815 8c21a6af653cf5c698bbc7525eb66cc8 520 SUPERFAMILY SSF53850 28 506 1.99E-94 T 28-03-2018 CI104_RS20815 8c21a6af653cf5c698bbc7525eb66cc8 520 PIRSF PIRSF002741 1 509 2.8E-72 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS20815 8c21a6af653cf5c698bbc7525eb66cc8 520 Gene3D G3DSA:3.40.190.10 147 295 1.2E-30 T 28-03-2018 CI104_RS20815 8c21a6af653cf5c698bbc7525eb66cc8 520 Gene3D G3DSA:3.90.76.10 45 146 3.1E-26 T 28-03-2018 CI104_RS20815 8c21a6af653cf5c698bbc7525eb66cc8 520 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 72 422 3.9E-69 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS20815 8c21a6af653cf5c698bbc7525eb66cc8 520 Gene3D G3DSA:3.10.105.10 296 489 7.9E-26 T 28-03-2018 CI104_RS23715 65e7adc13379185d10bd6b3635aaaa25 633 TIGRFAM TIGR00190 thiC: phosphomethylpyrimidine synthase 149 601 5.0E-225 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CI104_RS23715 65e7adc13379185d10bd6b3635aaaa25 633 Pfam PF01964 Radical SAM ThiC family 150 598 1.3E-199 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CI104_RS23715 65e7adc13379185d10bd6b3635aaaa25 633 Pfam PF13667 ThiC-associated domain 29 110 1.2E-32 T 28-03-2018 IPR025747 ThiC-associated domain KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CI104_RS23715 65e7adc13379185d10bd6b3635aaaa25 633 Hamap MF_00089 Phosphomethylpyrimidine synthase [thiC]. 149 603 56.311 T 28-03-2018 IPR002817 Phosphomethylpyrimidine synthase GO:0009228|GO:0051536 KEGG: 00730+4.1.99.17|MetaCyc: PWY-6890 CI104_RS15890 60fe8bc414ba6d859a00ced5f4cd73b3 125 TIGRFAM TIGR03500 FliO_TIGR: flagellar biosynthetic protein FliO 26 94 1.9E-23 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CI104_RS15890 60fe8bc414ba6d859a00ced5f4cd73b3 125 Pfam PF04347 Flagellar biosynthesis protein, FliO 38 120 5.3E-21 T 28-03-2018 IPR022781 Flagellar biosynthesis protein, FliO GO:0016021|GO:0044781 CI104_RS04500 adf9991d26ec720055411473b3111756 435 Pfam PF07690 Major Facilitator Superfamily 59 383 4.1E-28 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS04500 adf9991d26ec720055411473b3111756 435 Gene3D G3DSA:1.20.1250.20 237 434 3.5E-21 T 28-03-2018 CI104_RS04500 adf9991d26ec720055411473b3111756 435 SUPERFAMILY SSF103473 11 418 2.62E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS04500 adf9991d26ec720055411473b3111756 435 Gene3D G3DSA:1.20.1250.20 14 228 2.0E-27 T 28-03-2018 CI104_RS05930 943ef02e3644708d25d536e0ec7b71b4 258 SMART SM00849 6 220 0.0078 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05930 943ef02e3644708d25d536e0ec7b71b4 258 Gene3D G3DSA:3.60.15.10 1 258 1.4E-23 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05930 943ef02e3644708d25d536e0ec7b71b4 258 Pfam PF12706 Beta-lactamase superfamily domain 19 221 2.0E-11 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05930 943ef02e3644708d25d536e0ec7b71b4 258 SUPERFAMILY SSF56281 1 245 2.1E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 Gene3D G3DSA:3.90.226.10 9 315 1.5E-68 T 28-03-2018 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 SUPERFAMILY SSF52096 5 318 1.65E-103 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 91 102 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 200 209 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 156 169 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 116 134 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 172 185 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 PRINTS PR01069 Acetyl-CoA carboxylase carboxyl transferase alpha subunit signature 137 153 3.2E-50 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 TIGRFAM TIGR00513 accA: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 2 319 6.6E-173 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 Hamap MF_00823 Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha [accA]. 5 319 50.612 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05375 9450d7baa6bd72ca4fd80a52e2239134 319 Pfam PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit 5 151 3.5E-62 T 28-03-2018 IPR001095 Acetyl-CoA carboxylase, alpha subunit GO:0003989|GO:0006633|GO:0009317 KEGG: 00061+6.4.1.2|KEGG: 00254+6.4.1.2|KEGG: 00620+6.4.1.2|KEGG: 00640+6.4.1.2|KEGG: 00720+6.4.1.2|MetaCyc: PWY-6679|MetaCyc: PWY-7388 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 Hamap MF_00198 Polyamine aminopropyltransferase [speE]. 6 284 38.622 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 Gene3D G3DSA:3.40.50.150 57 288 1.8E-44 T 28-03-2018 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 Pfam PF17284 Spermidine synthase tetramerisation domain 6 57 8.2E-20 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 Pfam PF01564 Spermine/spermidine synthase domain 60 239 3.9E-67 T 28-03-2018 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 SUPERFAMILY SSF53335 7 283 2.33E-88 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 Gene3D G3DSA:2.30.140.10 1 54 4.9E-16 T 28-03-2018 IPR035246 Spermidine synthase, tetramerisation domain KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 ProSitePatterns PS01330 Polyamine biosynthesis (PABS) domain signature. 81 94 - T 28-03-2018 IPR030373 Polyamine biosynthesis domain, conserved site KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CI104_RS05075 71c2fc76a8b0a50a9167e1b6666229d7 288 TIGRFAM TIGR00417 speE: spermidine synthase 7 278 3.5E-123 T 28-03-2018 IPR001045 Spermidine/spermine synthases GO:0003824 KEGG: 00270+2.5.1.16|KEGG: 00330+2.5.1.16|KEGG: 00410+2.5.1.16|KEGG: 00480+2.5.1.16|Reactome: R-HSA-351202 CI104_RS00380 91e33dee126d99e8bcac73d9da717d22 325 SUPERFAMILY SSF53697 11 325 1.56E-59 T 28-03-2018 CI104_RS00380 91e33dee126d99e8bcac73d9da717d22 325 Gene3D G3DSA:3.40.50.10490 173 310 3.7E-14 T 28-03-2018 CI104_RS00380 91e33dee126d99e8bcac73d9da717d22 325 Gene3D G3DSA:3.40.50.10490 2 153 4.5E-22 T 28-03-2018 CI104_RS00380 91e33dee126d99e8bcac73d9da717d22 325 PIRSF PIRSF009290 1 325 2.2E-87 T 28-03-2018 IPR024713 Fructosamine deglycase FrlB CI104_RS00380 91e33dee126d99e8bcac73d9da717d22 325 Pfam PF01380 SIS domain 23 116 1.2E-12 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS15310 b229a7783b4461930792e6b136f2d211 213 SUPERFAMILY SSF51569 4 209 6.78E-69 T 28-03-2018 CI104_RS15310 b229a7783b4461930792e6b136f2d211 213 Gene3D G3DSA:3.20.20.70 1 213 4.6E-31 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS15310 b229a7783b4461930792e6b136f2d211 213 ProSitePatterns PS00159 KDPG and KHG aldolases active site. 40 49 - T 28-03-2018 IPR031337 KDPG/KHG aldolase, active site 1 KEGG: 00030+4.1.2.14|KEGG: 00330+4.1.3.16|KEGG: 00630+4.1.3.16|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS15310 b229a7783b4461930792e6b136f2d211 213 Pfam PF01081 KDPG and KHG aldolase 9 203 7.4E-92 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS15310 b229a7783b4461930792e6b136f2d211 213 ProSitePatterns PS00160 KDPG and KHG aldolases Schiff-base forming residue. 128 141 - T 28-03-2018 IPR031338 KDPG/KHG aldolase, active site 2 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS15310 b229a7783b4461930792e6b136f2d211 213 TIGRFAM TIGR01182 eda: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase 9 209 1.7E-86 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS20735 35bad7922aa3f489e1f9ad6a713bcd14 153 Pfam PF07670 Nucleoside recognition 27 90 7.8E-9 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CI104_RS26860 63641ce5490f895552959f50d887dab6 276 Pfam PF00905 Penicillin binding protein transpeptidase domain 42 261 1.1E-43 T 28-03-2018 IPR001460 Penicillin-binding protein, transpeptidase GO:0008658 CI104_RS26860 63641ce5490f895552959f50d887dab6 276 Gene3D G3DSA:3.40.710.10 26 274 1.2E-22 T 28-03-2018 CI104_RS26860 63641ce5490f895552959f50d887dab6 276 SUPERFAMILY SSF56601 28 275 4.66E-36 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS26860 63641ce5490f895552959f50d887dab6 276 ProSitePatterns PS00337 Beta-lactamase class-D active site. 69 79 - T 28-03-2018 IPR002137 Beta-lactamase, class-D active site GO:0008800|GO:0017001 KEGG: 00311+3.5.2.6 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 PIRSF PIRSF000850 1 451 9.4E-267 T 28-03-2018 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 Pfam PF13091 PLD-like domain 40 153 2.3E-6 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 Pfam PF13091 PLD-like domain 257 404 1.5E-22 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 Gene3D G3DSA:3.30.870.10 248 419 3.1E-19 T 28-03-2018 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 SUPERFAMILY SSF56024 252 397 7.22E-19 T 28-03-2018 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 SMART SM00155 352 379 1.8E-4 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 SMART SM00155 133 159 0.012 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 SUPERFAMILY SSF56024 9 215 1.83E-27 T 28-03-2018 CI104_RS18905 f86503ce3fa7bdf86d04324e7b8e6e8c 451 Gene3D G3DSA:3.30.870.10 14 239 6.7E-18 T 28-03-2018 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 SMART SM01360 963 1052 1.6E-18 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Pfam PF00207 Alpha-2-macroglobulin family 973 1051 1.1E-5 T 28-03-2018 IPR001599 Alpha-2-macroglobulin GO:0004866 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Gene3D G3DSA:2.60.40.10 380 475 1.2E-5 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Pfam PF10569 Alpha-macro-globulin thiol-ester bond-forming region 1178 1195 1.2E-4 T 28-03-2018 IPR019565 Alpha-2-macroglobulin, thiol-ester bond-forming CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 PIRSF PIRSF038980 1 1647 0.0 T 28-03-2018 IPR026284 Alpha-2-macroglobulin domain protein, bacteria CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Gene3D G3DSA:2.60.40.10 1014 1117 2.3E-6 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Gene3D G3DSA:2.60.40.10 857 1013 0.31 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Pfam PF11974 Alpha-2-macroglobulin MG1 domain 284 377 3.6E-22 T 28-03-2018 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Pfam PF01835 MG2 domain 383 474 1.7E-19 T 28-03-2018 IPR002890 Alpha-2-macroglobulin, N-terminal GO:0004866 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 SUPERFAMILY SSF48239 1172 1428 3.93E-44 T 28-03-2018 IPR008930 Terpenoid cyclases/protein prenyltransferase alpha-alpha toroid CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 SMART SM01359 753 901 3.9E-35 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Pfam PF07703 Alpha-2-macroglobulin family N-terminal region 754 901 1.3E-14 T 28-03-2018 IPR011625 Alpha-2-macroglobulin, N-terminal 2 CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Gene3D G3DSA:2.60.40.10 637 744 0.0014 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS18570 305300061f140a66fc1c967fbfba6f20 1647 Gene3D G3DSA:1.50.10.20 1163 1451 5.6E-29 T 28-03-2018 CI104_RS00150 aad4bba6c93064224aaa18822b95fa4a 29 Pfam PF13939 Toxin TisB, type I toxin-antitoxin system 1 28 3.9E-15 T 28-03-2018 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 CI104_RS00150 aad4bba6c93064224aaa18822b95fa4a 29 TIGRFAM TIGR04459 TisB_tox: type I toxin-antitoxin system toxin TisB 1 29 1.2E-17 T 28-03-2018 IPR025211 Toxin TisB, type I toxin-antitoxin system GO:0005253|GO:0005887|GO:0009432|GO:0022611 CI104_RS19230 ca2d512e832c9ff0c1a4878f16e4aa89 468 SUPERFAMILY SSF56954 6 450 9.55E-65 T 28-03-2018 CI104_RS19230 ca2d512e832c9ff0c1a4878f16e4aa89 468 Pfam PF02321 Outer membrane efflux protein 63 242 1.0E-25 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS19230 ca2d512e832c9ff0c1a4878f16e4aa89 468 Pfam PF02321 Outer membrane efflux protein 272 445 5.2E-19 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS19230 ca2d512e832c9ff0c1a4878f16e4aa89 468 Gene3D G3DSA:1.20.1600.10 16 453 9.5E-54 T 28-03-2018 CI104_RS19230 ca2d512e832c9ff0c1a4878f16e4aa89 468 TIGRFAM TIGR01844 type_I_sec_TolC: type I secretion outer membrane protein, TolC family 58 463 2.4E-110 T 28-03-2018 IPR010130 Type I secretion outer membrane protein, TolC GO:0006810|GO:0019867 CI104_RS00250 93d13bfe6f8fe2461ff78a7950fb061e 100 PIRSF PIRSF000699 1 100 1.1E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS00250 93d13bfe6f8fe2461ff78a7950fb061e 100 SUPERFAMILY SSF46973 2 100 2.09E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS00250 93d13bfe6f8fe2461ff78a7950fb061e 100 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 1.7E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS00250 93d13bfe6f8fe2461ff78a7950fb061e 100 Gene3D G3DSA:1.20.58.80 3 100 1.0E-35 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 TIGRFAM TIGR04502 microcomp_EutL: microcompartment protein EutL 6 217 9.3E-101 T 28-03-2018 IPR030983 Ethanolamine utilization protein EutL GO:0005198 CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 SMART SM00877 146 215 4.9E-6 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 SMART SM00877 35 132 9.5E-5 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 SUPERFAMILY SSF143414 158 211 1.05E-5 T 28-03-2018 CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 PIRSF PIRSF012290 1 219 1.5E-84 T 28-03-2018 IPR009193 Polyhedral organelle shell protein, EutL/PduB type GO:0009605 CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 Pfam PF00936 BMC domain 160 208 2.7E-6 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18235 8887e9236fd314264b4e80c91afaae0d 219 Pfam PF00936 BMC domain 36 107 2.4E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS27720 d234da978642d46ba5900cc196ca9446 328 Pfam PF06834 TraU protein 26 327 2.6E-114 T 28-03-2018 IPR009649 TraU CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 TIGRFAM TIGR00962 atpA: ATP synthase F1, alpha subunit 2 512 5.5E-261 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 SUPERFAMILY SSF47917 383 511 9.16E-46 T 28-03-2018 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Pfam PF00006 ATP synthase alpha/beta family, nucleotide-binding domain 149 375 1.8E-72 T 28-03-2018 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 SUPERFAMILY SSF52540 96 381 2.78E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Pfam PF00306 ATP synthase alpha/beta chain, C terminal domain 382 507 3.1E-45 T 28-03-2018 IPR000793 ATP synthase, alpha subunit, C-terminal GO:0015986 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Pfam PF02874 ATP synthase alpha/beta family, beta-barrel domain 29 92 1.2E-12 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Gene3D G3DSA:2.40.30.20 3 82 2.3E-27 T 28-03-2018 IPR023366 ATP synthase subunit alpha-like domain KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Hamap MF_01346 ATP synthase subunit alpha [atpA]. 1 512 50.028 T 28-03-2018 IPR005294 ATP synthase, F1 complex, alpha subunit GO:0015986|GO:0045261|GO:0046933 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219|Reactome: R-HSA-1268020|Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Gene3D G3DSA:3.40.50.300 83 375 4.6E-112 T 28-03-2018 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 Gene3D G3DSA:1.20.150.20 384 510 3.6E-46 T 28-03-2018 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 SUPERFAMILY SSF50615 10 94 2.55E-25 T 28-03-2018 IPR004100 ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain GO:0015992|GO:0046034 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS25175 ac1cbe4b15b3423ade53d1213dd4ffa5 513 ProSitePatterns PS00152 ATP synthase alpha and beta subunits signature. 366 375 - T 28-03-2018 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site GO:0005524 KEGG: 00190+3.6.3.14|KEGG: 00195+3.6.3.14|MetaCyc: PWY-7219 CI104_RS27705 0bb46ffa2d192217813f522726a6ab2e 62 Pfam PF11100 Conjugal transfer protein TrbE 2 46 2.7E-6 T 28-03-2018 IPR020150 Type IV conjugative transfer system protein TrbE CI104_RS12700 25ce18ff1c60ffd33c3f02860380449c 236 Gene3D G3DSA:1.10.3720.10 36 234 1.1E-26 T 28-03-2018 CI104_RS12700 25ce18ff1c60ffd33c3f02860380449c 236 SUPERFAMILY SSF161098 40 223 4.32E-34 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12700 25ce18ff1c60ffd33c3f02860380449c 236 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 61 234 2.2E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 Pfam PF03459 TOBE domain 290 350 1.5E-17 T 28-03-2018 IPR005116 Transport-associated OB, type 1 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 SUPERFAMILY SSF50331 235 350 6.56E-22 T 28-03-2018 IPR008995 Molybdate/tungstate binding, C-terminal CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 SUPERFAMILY SSF52540 9 220 1.36E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 TIGRFAM TIGR00638 Mop: molybdenum-pterin binding domain 288 351 5.9E-23 T 28-03-2018 IPR004606 Molybdenum-pterin binding GO:0006810|GO:0030151 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 Gene3D G3DSA:2.40.50.100 273 349 9.2E-22 T 28-03-2018 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 ProSitePatterns PS00211 ABC transporters family signature. 129 143 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 Gene3D G3DSA:3.40.50.300 16 266 3.9E-55 T 28-03-2018 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 TIGRFAM TIGR02142 modC_ABC: molybdate ABC transporter, ATP-binding protein 2 350 3.1E-162 T 28-03-2018 IPR011868 Molybdate ABC transporter, ATP-binding protein GO:0005524|GO:0015098|GO:0015689|GO:0016020 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 Pfam PF00005 ABC transporter 18 156 7.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS08215 f9e816fc1e66b8d55c5a36b875875c72 352 SMART SM00382 23 206 9.1E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS07215 90fd0c0d6120973e782119225ecdea0f 50 Pfam PF01848 Hok/gef family 5 46 5.7E-17 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS07215 90fd0c0d6120973e782119225ecdea0f 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 5 23 5.8E-11 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS07215 90fd0c0d6120973e782119225ecdea0f 50 PRINTS PR00281 Hok/Gef cell toxic protein family signature 25 47 5.8E-11 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS07215 90fd0c0d6120973e782119225ecdea0f 50 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 1 49 3.0E-16 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS07215 90fd0c0d6120973e782119225ecdea0f 50 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 10 29 - T 28-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 CI104_RS10225 fa87ea8d27108b72b066fa9f925d3b37 184 Pfam PF02613 Nitrate reductase delta subunit 35 147 2.1E-14 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS10225 fa87ea8d27108b72b066fa9f925d3b37 184 SUPERFAMILY SSF89155 2 180 8.37E-44 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS10225 fa87ea8d27108b72b066fa9f925d3b37 184 Gene3D G3DSA:1.10.3480.10 1 184 4.4E-36 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS10225 fa87ea8d27108b72b066fa9f925d3b37 184 PIRSF PIRSF004690 1 184 2.3E-57 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 SUPERFAMILY SSF159127 1 76 2.62E-24 T 28-03-2018 CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 2 9 9.2E-25 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 63 75 9.2E-25 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 20 36 9.2E-25 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 PRINTS PR00445 HupF/HypC hydrogenase expression/synthesis family signature 45 61 9.2E-25 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 Pfam PF01455 HupF/HypC family 1 72 2.8E-26 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 TIGRFAM TIGR00074 hypC_hupF: hydrogenase assembly chaperone HypC/HupF 1 77 3.1E-30 T 28-03-2018 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CI104_RS04055 5c483e2da5e069dbfa505a62cbb6e792 82 ProSitePatterns PS01097 Hydrogenases expression/synthesis hupF/hypC family signature. 1 9 - T 28-03-2018 IPR019812 Hydrogenase assembly chaperone, conserved site CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 142 158 5.9E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 191 208 5.9E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 51 5.9E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 75 94 5.9E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 161 179 5.9E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 242 256 5.9E-57 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 TIGRFAM TIGR01398 FlhA: flagellar biosynthesis protein FlhA 22 689 4.5E-284 T 28-03-2018 IPR006301 Flagellar biosynthesis protein FlhA GO:0016021|GO:0044780 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 Pfam PF00771 FHIPEP family 31 680 3.1E-269 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 147 170 - T 28-03-2018 IPR025505 FHIPEP conserved site CI104_RS15445 556775f7d20df1e48a9ab63f7ee7d277 692 PIRSF PIRSF005419 7 692 5.0E-244 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 Gene3D G3DSA:3.40.50.620 8 244 1.5E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 48 219 5.5E-52 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 SUPERFAMILY SSF52402 20 208 2.93E-53 T 28-03-2018 CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 PIRSF PIRSF000857 6 244 1.1E-54 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 TIGRFAM TIGR00434 cysH: phosophoadenylyl-sulfate reductase 33 243 1.8E-95 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 TIGRFAM TIGR02057 PAPS_reductase: phosphoadenosine phosphosulfate reductase 21 242 6.6E-103 T 28-03-2018 IPR011800 Phosphoadenosine phosphosulphate reductase CysH GO:0004604|GO:0019379 KEGG: 00920+1.8.4.8 CI104_RS19990 2658cececeeda1355a328c40595f9ae9 244 Hamap MF_00063 Phosphoadenosine phosphosulfate reductase [cysH]. 9 243 40.812 T 28-03-2018 IPR004511 Phosphoadenosine phosphosulphate/adenosine 5'-phosphosulphate reductase GO:0004604|GO:0019379|GO:0055114 KEGG: 00920+1.8.4.8 CI104_RS01865 4c55043c31895e344deceed46d385f98 108 SUPERFAMILY SSF50022 1 107 2.07E-34 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS01865 4c55043c31895e344deceed46d385f98 108 Pfam PF13806 Rieske-like [2Fe-2S] domain 3 106 5.2E-39 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CI104_RS01865 4c55043c31895e344deceed46d385f98 108 TIGRFAM TIGR02378 nirD_assim_sml: nitrite reductase [NAD(P)H], small subunit 3 107 1.8E-39 T 28-03-2018 IPR012748 Nitrite reductase [NAD(P)H] small subunit, NirD GO:0008942|GO:0042128|GO:0055114 CI104_RS01865 4c55043c31895e344deceed46d385f98 108 Gene3D G3DSA:2.102.10.10 1 108 1.4E-16 T 28-03-2018 IPR017941 Rieske [2Fe-2S] iron-sulphur domain GO:0016491|GO:0051537|GO:0055114 CI104_RS28650 ec302d8841f50d983261bcbbeff24e35 78 Pfam PF05052 MerE protein 2 74 8.3E-43 T 28-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 CI104_RS28650 ec302d8841f50d983261bcbbeff24e35 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-16 T 28-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 CI104_RS03565 877073be0340fae893f7feaf759c2028 192 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 115 2.4E-41 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS03565 877073be0340fae893f7feaf759c2028 192 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 8 190 4.3E-65 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CI104_RS17185 8c0f3a452bdc39ff79773f32fee9e3ae 165 Gene3D G3DSA:2.60.40.550 30 102 3.2E-36 T 28-03-2018 CI104_RS17185 8c0f3a452bdc39ff79773f32fee9e3ae 165 Pfam PF03974 Ecotin 33 155 2.3E-52 T 28-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CI104_RS17185 8c0f3a452bdc39ff79773f32fee9e3ae 165 SUPERFAMILY SSF49772 29 163 1.29E-56 T 28-03-2018 IPR023189 Proteinase inhibitor I11, ecotin domain CI104_RS17185 8c0f3a452bdc39ff79773f32fee9e3ae 165 PIRSF PIRSF006865 1 165 4.6E-67 T 28-03-2018 IPR005658 Proteinase inhibitor I11, ecotin CI104_RS17185 8c0f3a452bdc39ff79773f32fee9e3ae 165 Gene3D G3DSA:4.10.1230.10 108 162 1.0E-27 T 28-03-2018 IPR027438 Ecotin, C-terminal CI104_RS17185 8c0f3a452bdc39ff79773f32fee9e3ae 165 Hamap MF_00706 Ecotin [eco]. 1 165 41.307 T 28-03-2018 IPR023084 Proteinase inhibitor I11, ecotin, gammaproteobacteria CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 ProSitePatterns PS00907 Uroporphyrinogen decarboxylase signature 2. 142 158 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 Hamap MF_00218 Uroporphyrinogen decarboxylase [hemE]. 6 349 50.386 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 TIGRFAM TIGR01464 hemE: uroporphyrinogen decarboxylase 9 347 2.9E-136 T 28-03-2018 IPR006361 Uroporphyrinogen decarboxylase HemE GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 SUPERFAMILY SSF51726 1 353 1.44E-120 T 28-03-2018 CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 Gene3D G3DSA:3.20.20.210 1 354 2.4E-109 T 28-03-2018 CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 ProSitePatterns PS00906 Uroporphyrinogen decarboxylase signature 1. 22 31 - T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CI104_RS23700 006641c4b8bdf363f6eaf26f32d5e80d 354 Pfam PF01208 Uroporphyrinogen decarboxylase (URO-D) 5 347 6.4E-141 T 28-03-2018 IPR000257 Uroporphyrinogen decarboxylase (URO-D) GO:0004853|GO:0006779 KEGG: 00860+4.1.1.37|MetaCyc: PWY-5531|MetaCyc: PWY-7159|MetaCyc: PWY-7766|Reactome: R-HSA-189451 CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 Hamap MF_00051 Serine hydroxymethyltransferase [glyA]. 7 417 53.225 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 PIRSF PIRSF000412 1 417 2.0E-173 T 28-03-2018 IPR001085 Serine hydroxymethyltransferase GO:0004372|GO:0006545|GO:0035999 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 Gene3D G3DSA:3.90.1150.10 276 416 8.9E-59 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 SUPERFAMILY SSF53383 6 416 1.32E-183 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 Gene3D G3DSA:3.40.640.10 37 275 3.4E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 Pfam PF00464 Serine hydroxymethyltransferase 8 386 5.4E-188 T 28-03-2018 CI104_RS18715 9dd6fbf033c9b196cfb9de4e3dd370a4 417 ProSitePatterns PS00096 Serine hydroxymethyltransferase pyridoxal-phosphate attachment site. 221 237 - T 28-03-2018 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site GO:0030170 KEGG: 00260+2.1.2.1|KEGG: 00460+2.1.2.1|KEGG: 00630+2.1.2.1|KEGG: 00670+2.1.2.1|KEGG: 00680+2.1.2.1|MetaCyc: PWY-1622|MetaCyc: PWY-181|MetaCyc: PWY-2161|MetaCyc: PWY-2201|MetaCyc: PWY-3661|MetaCyc: PWY-3661-1|MetaCyc: PWY-3841|MetaCyc: PWY-5497|Reactome: R-HSA-196757 CI104_RS13620 713eeaa51b28024d56c410e3df081204 548 SUPERFAMILY SSF103473 41 225 2.09E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13620 713eeaa51b28024d56c410e3df081204 548 SUPERFAMILY SSF103473 275 446 2.09E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13620 713eeaa51b28024d56c410e3df081204 548 SUPERFAMILY SSF103473 506 533 2.09E-19 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13620 713eeaa51b28024d56c410e3df081204 548 Pfam PF07690 Major Facilitator Superfamily 46 436 1.8E-10 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13620 713eeaa51b28024d56c410e3df081204 548 Gene3D G3DSA:1.20.1250.20 33 226 1.0E-8 T 28-03-2018 CI104_RS13620 713eeaa51b28024d56c410e3df081204 548 Gene3D G3DSA:1.20.1250.20 285 542 5.2E-10 T 28-03-2018 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 104 118 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 70 79 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 163 173 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 136 147 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 51 67 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 34 48 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PRINTS PR01171 Bacterial lipocalin signature 121 129 9.2E-50 T 28-03-2018 IPR002446 Lipocalin, bacterial GO:0005215 CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 ProSitePatterns PS00213 Lipocalin signature. 33 46 - T 28-03-2018 IPR022272 Lipocalin family conserved site CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 PIRSF PIRSF036893 1 177 3.9E-53 T 28-03-2018 IPR022271 Lipocalin, ApoD type CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 Pfam PF08212 Lipocalin-like domain 35 174 9.1E-47 T 28-03-2018 IPR000566 Lipocalin/cytosolic fatty-acid binding domain CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 SUPERFAMILY SSF50814 12 176 9.66E-49 T 28-03-2018 IPR012674 Calycin CI104_RS22635 e5975607d80faef35546f6f752c194a2 177 Gene3D G3DSA:2.40.128.20 2 177 3.5E-46 T 28-03-2018 IPR012674 Calycin CI104_RS27805 d15c2e313b5bcba245322a6ca1aa3c39 158 SUPERFAMILY SSF53955 19 145 5.93E-28 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS27805 d15c2e313b5bcba245322a6ca1aa3c39 158 Gene3D G3DSA:1.10.530.10 16 158 1.7E-20 T 28-03-2018 CI104_RS27805 d15c2e313b5bcba245322a6ca1aa3c39 158 Pfam PF01464 Transglycosylase SLT domain 22 133 1.0E-21 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS13830 330dd56076b5a83a31a4ab78189ba777 316 SUPERFAMILY SSF52402 155 307 2.34E-24 T 28-03-2018 CI104_RS13830 330dd56076b5a83a31a4ab78189ba777 316 Pfam PF00582 Universal stress protein family 3 146 3.3E-18 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS13830 330dd56076b5a83a31a4ab78189ba777 316 Pfam PF00582 Universal stress protein family 174 300 2.2E-14 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS13830 330dd56076b5a83a31a4ab78189ba777 316 Gene3D G3DSA:3.40.50.620 1 153 2.9E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS13830 330dd56076b5a83a31a4ab78189ba777 316 Gene3D G3DSA:3.40.50.620 154 304 4.5E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS13830 330dd56076b5a83a31a4ab78189ba777 316 SUPERFAMILY SSF52402 4 153 2.51E-26 T 28-03-2018 CI104_RS09125 096c0ea4fce098eae101ff920b532590 182 Pfam PF05951 Bacterial protein of unknown function (DUF882) 34 182 4.4E-60 T 28-03-2018 IPR010275 Protein of unknown function DUF882 CI104_RS09125 096c0ea4fce098eae101ff920b532590 182 Gene3D G3DSA:3.30.1380.10 56 182 1.4E-22 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS09125 096c0ea4fce098eae101ff920b532590 182 SUPERFAMILY SSF55166 68 182 3.14E-32 T 28-03-2018 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain Reactome: R-HSA-373080|Reactome: R-HSA-5358346|Reactome: R-HSA-5362798|Reactome: R-HSA-5632681|Reactome: R-HSA-5632684|Reactome: R-HSA-5635838|Reactome: R-HSA-5658034 CI104_RS03625 2ea789784cc065303b8a80c9745ce199 161 PIRSF PIRSF029208 1 154 4.3E-63 T 28-03-2018 IPR016912 Bacteriophage P2, GpU CI104_RS03625 2ea789784cc065303b8a80c9745ce199 161 Pfam PF06995 Phage P2 GpU 6 125 9.6E-46 T 28-03-2018 IPR009734 Myoviridae, GpU CI104_RS21580 d999205e684387fc936edf61884a6c6a 402 Gene3D G3DSA:1.20.1250.20 10 205 5.8E-11 T 28-03-2018 CI104_RS21580 d999205e684387fc936edf61884a6c6a 402 SUPERFAMILY SSF103473 16 389 1.44E-29 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS21580 d999205e684387fc936edf61884a6c6a 402 Gene3D G3DSA:1.20.1250.20 206 389 4.0E-14 T 28-03-2018 CI104_RS21580 d999205e684387fc936edf61884a6c6a 402 Pfam PF06779 Uncharacterised MFS-type transporter YbfB 23 379 6.4E-125 T 28-03-2018 IPR010645 Uncharacterised MFS-type transporter YbfB CI104_RS26185 c20cb3688c6b68acb4b52452cb44577f 234 SUPERFAMILY SSF52218 2 221 1.84E-63 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS26185 c20cb3688c6b68acb4b52452cb44577f 234 Gene3D G3DSA:3.40.50.360 15 219 5.5E-50 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS26185 c20cb3688c6b68acb4b52452cb44577f 234 TIGRFAM TIGR02690 resist_ArsH: arsenical resistance protein ArsH 4 220 2.1E-114 T 28-03-2018 IPR014063 Arsenate resistance ArsH CI104_RS26185 c20cb3688c6b68acb4b52452cb44577f 234 Pfam PF03358 NADPH-dependent FMN reductase 28 173 1.2E-27 T 28-03-2018 IPR005025 NADPH-dependent FMN reductase-like GO:0016491 CI104_RS23255 98f6d83fd829857c54e80ef55c1bad3a 449 Pfam PF00860 Permease family 26 409 1.2E-84 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS06790 6accaddd3fd88cb20d52a385dfa52d6d 158 Pfam PF06891 P2 phage tail completion protein R (GpR) 1 135 3.5E-23 T 28-03-2018 IPR009678 Bacteriophage tail completion protein R CI104_RS19735 407b98f5e7487639d2d73d47f53ff547 119 Pfam PF06923 Glucitol operon activator protein (GutM) 5 110 1.6E-34 T 28-03-2018 IPR009693 Glucitol operon activator CI104_RS19735 407b98f5e7487639d2d73d47f53ff547 119 PIRSF PIRSF011474 1 119 1.2E-43 T 28-03-2018 IPR009693 Glucitol operon activator CI104_RS28300 4b77b96578950a90f5ae0020b8caee9f 101 TIGRFAM TIGR02762 TraL_TIGR: type IV conjugative transfer system protein TraL 7 100 1.2E-21 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CI104_RS28300 4b77b96578950a90f5ae0020b8caee9f 101 Pfam PF07178 TraL protein 9 100 7.0E-33 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CI104_RS28300 4b77b96578950a90f5ae0020b8caee9f 101 PIRSF PIRSF003259 1 101 3.4E-50 T 28-03-2018 IPR016382 Pilus assembly, TraL GO:0009279|GO:0009297 CI104_RS02140 389919749e70ffc67e9bf46e53468622 144 ProSitePatterns PS00475 Ribosomal protein L15 signature. 109 139 - T 28-03-2018 IPR001196 Ribosomal protein L15, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02140 389919749e70ffc67e9bf46e53468622 144 TIGRFAM TIGR01071 rplO_bact: ribosomal protein uL15 2 143 1.9E-51 T 28-03-2018 IPR005749 Ribosomal protein L15, bacterial-type GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02140 389919749e70ffc67e9bf46e53468622 144 Pfam PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A 28 143 3.7E-32 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P CI104_RS02140 389919749e70ffc67e9bf46e53468622 144 Gene3D G3DSA:3.100.10.10 42 144 9.4E-25 T 28-03-2018 CI104_RS02140 389919749e70ffc67e9bf46e53468622 144 SUPERFAMILY SSF52080 4 143 1.83E-46 T 28-03-2018 IPR021131 Ribosomal protein L18e/L15P CI104_RS02140 389919749e70ffc67e9bf46e53468622 144 Hamap MF_01341 50S ribosomal protein L15 [rplO]. 3 144 19.536 T 28-03-2018 IPR030878 Ribosomal protein L15 GO:0003735|GO:0006412|GO:0015934 CI104_RS19290 877e2c444f73367a2c2464c4ce2424b1 760 SUPERFAMILY SSF52540 191 303 1.89E-6 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19290 877e2c444f73367a2c2464c4ce2424b1 760 Gene3D G3DSA:3.40.50.300 174 387 1.7E-6 T 28-03-2018 CI104_RS17545 32fc110dabd3e7320077fce0508410c4 220 ProSitePatterns PS01150 Respiratory-chain NADH dehydrogenase 20 Kd subunit signature. 144 160 - T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17545 32fc110dabd3e7320077fce0508410c4 220 SUPERFAMILY SSF56770 35 185 3.4E-65 T 28-03-2018 CI104_RS17545 32fc110dabd3e7320077fce0508410c4 220 Gene3D G3DSA:3.40.50.700 36 205 2.3E-38 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17545 32fc110dabd3e7320077fce0508410c4 220 Hamap MF_01356 NAD(P)H-quinone oxidoreductase subunit K, chloroplastic [ndhK]. 27 177 42.502 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17545 32fc110dabd3e7320077fce0508410c4 220 TIGRFAM TIGR01957 nuoB_fam: NADH-quinone oxidoreductase, B subunit 37 178 1.8E-70 T 28-03-2018 IPR006138 NADH-ubiquinone oxidoreductase, 20 Kd subunit GO:0008137|GO:0048038|GO:0051539|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17545 32fc110dabd3e7320077fce0508410c4 220 Pfam PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit 64 170 3.5E-22 T 28-03-2018 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit GO:0051536|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS24870 f0fb80aabe406cff2ae4db0393041c22 246 Pfam PF03808 Glycosyl transferase WecB/TagA/CpsF family 65 231 8.6E-53 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS24870 f0fb80aabe406cff2ae4db0393041c22 246 Gene3D G3DSA:3.20.20.70 133 212 0.15 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24870 f0fb80aabe406cff2ae4db0393041c22 246 TIGRFAM TIGR00696 wecG_tagA_cpsF: glycosyltransferase, WecB/TagA/CpsF family 61 237 4.4E-76 T 28-03-2018 IPR004629 Glycosyl transferase WecB/TagA/CpsF GO:0009058 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS24870 f0fb80aabe406cff2ae4db0393041c22 246 Hamap MF_01001 UDP-N-acetyl-D-mannosaminuronic acid transferase [wecG]. 1 246 60.343 T 28-03-2018 IPR023085 UDP-N-acetyl-D-mannosaminuronic acid transferase GO:0009246|GO:0016758 KEGG: 00500+2.4.1.18|MetaCyc: PWY-5067|MetaCyc: PWY-622 CI104_RS13945 ea012cb84f1def1f6adc7abe2c41f3d3 262 Gene3D G3DSA:3.20.20.150 1 262 2.7E-44 T 28-03-2018 CI104_RS13945 ea012cb84f1def1f6adc7abe2c41f3d3 262 Pfam PF01261 Xylose isomerase-like TIM barrel 19 217 8.4E-27 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS13945 ea012cb84f1def1f6adc7abe2c41f3d3 262 SUPERFAMILY SSF51658 1 259 4.56E-52 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS06040 42b75dbfd0ffe80816f1e68ad4a7df61 68 ProDom PD073772 MEMBRANE TRANSMEMBRANE YAIZ INNER ECS0430 GENOME 1 65 4.0E-29 T 28-03-2018 IPR020490 Uncharacterised protein family YaiZ CI104_RS06040 42b75dbfd0ffe80816f1e68ad4a7df61 68 Pfam PF10953 Protein of unknown function (DUF2754) 1 66 8.9E-43 T 28-03-2018 IPR020490 Uncharacterised protein family YaiZ CI104_RS08205 dd1bd98c8c2cc726cf70038c785da528 257 Pfam PF13531 Bacterial extracellular solute-binding protein 29 254 2.5E-50 T 28-03-2018 CI104_RS08205 dd1bd98c8c2cc726cf70038c785da528 257 Gene3D G3DSA:3.40.190.10 27 120 2.2E-17 T 28-03-2018 CI104_RS08205 dd1bd98c8c2cc726cf70038c785da528 257 TIGRFAM TIGR01256 modA: molybdate ABC transporter, periplasmic molybdate-binding protein 34 253 4.7E-87 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CI104_RS08205 dd1bd98c8c2cc726cf70038c785da528 257 PIRSF PIRSF004846 1 257 1.4E-84 T 28-03-2018 IPR005950 Molybdate ABC transporter, substrate-binding protein GO:0015689|GO:0030288 CI104_RS08205 dd1bd98c8c2cc726cf70038c785da528 257 Gene3D G3DSA:3.40.190.10 121 218 1.1E-32 T 28-03-2018 CI104_RS08205 dd1bd98c8c2cc726cf70038c785da528 257 SUPERFAMILY SSF53850 28 255 2.47E-70 T 28-03-2018 CI104_RS03515 7592d55b1145f250a9055017786055ba 216 Gene3D G3DSA:1.25.40.10 14 216 7.3E-4 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS03515 7592d55b1145f250a9055017786055ba 216 Pfam PF05944 Phage small terminase subunit 35 163 9.1E-43 T 28-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 9 167 1.5E-46 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 PIRSF PIRSF000103 1 298 2.6E-80 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 SUPERFAMILY SSF48179 170 295 1.25E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 Gene3D G3DSA:1.10.1040.10 177 296 3.9E-38 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 11 24 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 170 290 3.0E-34 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 Gene3D G3DSA:3.40.50.720 2 176 1.2E-36 T 28-03-2018 CI104_RS15005 d57f92627dbfe10b7b97965eaea6d493 302 SUPERFAMILY SSF51735 9 167 1.32E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 SMART SM00487 16 286 0.002 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 Gene3D G3DSA:3.40.50.300 437 619 2.4E-12 T 28-03-2018 CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 SUPERFAMILY SSF52540 13 232 1.11E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 Pfam PF13307 Helicase C-terminal domain 459 616 2.3E-34 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 SUPERFAMILY SSF52540 40 88 6.17E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 SUPERFAMILY SSF52540 573 597 6.17E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 SUPERFAMILY SSF52540 477 542 6.17E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 Gene3D G3DSA:3.40.50.300 17 417 1.2E-31 T 28-03-2018 CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 SMART SM00491 474 603 3.8E-55 T 28-03-2018 IPR006555 ATP-dependent helicase, C-terminal GO:0003676|GO:0005524|GO:0006139|GO:0008026|GO:0016818 CI104_RS15080 ffbc3309e13d30833db419997e6a5414 636 Pfam PF04851 Type III restriction enzyme, res subunit 18 232 4.1E-6 T 28-03-2018 IPR006935 Helicase/UvrB, N-terminal GO:0003677|GO:0005524|GO:0016787 CI104_RS07045 1a69e3619d30747da749284c6dda4156 148 Gene3D G3DSA:3.10.180.10 17 138 1.3E-7 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS07045 1a69e3619d30747da749284c6dda4156 148 SUPERFAMILY SSF54593 19 135 1.55E-9 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 ProSitePatterns PS01021 Coproporphyrinogen III oxidase signature. 164 188 - T 28-03-2018 IPR018375 Coproporphyrinogen III oxidase, conserved site GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 SUPERFAMILY SSF102886 3 298 4.58E-139 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 123 145 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 46 67 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 88 112 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 160 189 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 260 286 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 29 45 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PRINTS PR00073 Coprogen oxidase signature 232 259 5.8E-89 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 Hamap MF_00333 Oxygen-dependent coproporphyrinogen-III oxidase [hemF]. 2 275 58.998 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 PIRSF PIRSF000166 2 299 2.0E-128 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 Gene3D G3DSA:3.40.1500.10 1 299 3.7E-139 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS18220 8c45b35aa0eeca99269dedef985f6925 299 Pfam PF01218 Coproporphyrinogen III oxidase 7 299 2.0E-132 T 28-03-2018 IPR001260 Coproporphyrinogen III oxidase, aerobic GO:0004109|GO:0006779|GO:0055114 KEGG: 00860+1.3.3.3|MetaCyc: PWY-7159|Reactome: R-HSA-189451 CI104_RS06625 2b69b70bd7176484b61b2bccfae96f4b 109 SUPERFAMILY SSF82607 11 103 2.62E-36 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CI104_RS06625 2b69b70bd7176484b61b2bccfae96f4b 109 Gene3D G3DSA:3.30.1310.10 1 109 1.0E-45 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CI104_RS06625 2b69b70bd7176484b61b2bccfae96f4b 109 PIRSF PIRSF004555 3 109 2.4E-39 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CI104_RS06625 2b69b70bd7176484b61b2bccfae96f4b 109 Pfam PF02575 YbaB/EbfC DNA-binding family 11 99 4.3E-35 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CI104_RS06625 2b69b70bd7176484b61b2bccfae96f4b 109 Hamap MF_00274 Nucleoid-associated protein YbaB [ybaB]. 5 98 23.284 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CI104_RS06625 2b69b70bd7176484b61b2bccfae96f4b 109 TIGRFAM TIGR00103 DNA_YbaB_EbfC: DNA-binding protein, YbaB/EbfC family 1 105 1.4E-42 T 28-03-2018 IPR004401 Nucleoid-associated protein YbaB/EbfC family CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 7 66 3.1E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 SUPERFAMILY SSF53850 93 299 1.25E-39 T 28-03-2018 CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 Gene3D G3DSA:3.40.190.10 92 178 2.5E-13 T 28-03-2018 CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 Gene3D G3DSA:3.40.190.10 179 267 5.8E-25 T 28-03-2018 CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 Gene3D G3DSA:1.10.10.10 6 90 2.0E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 Pfam PF03466 LysR substrate binding domain 91 295 4.4E-36 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS15050 a813d20a55d4491556db2319e1ba1ed1 305 SUPERFAMILY SSF46785 7 90 3.56E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19555 774a551462838baa77570835aad5238d 447 Gene3D G3DSA:3.40.640.10 113 353 1.0E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS19555 774a551462838baa77570835aad5238d 447 Pfam PF00155 Aminotransferase class I and II 126 388 4.5E-21 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS19555 774a551462838baa77570835aad5238d 447 SUPERFAMILY SSF53383 91 443 1.64E-77 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS19555 774a551462838baa77570835aad5238d 447 Pfam PF00392 Bacterial regulatory proteins, gntR family 4 66 2.9E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS19555 774a551462838baa77570835aad5238d 447 SUPERFAMILY SSF46785 1 68 6.87E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19555 774a551462838baa77570835aad5238d 447 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 40 56 9.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS19555 774a551462838baa77570835aad5238d 447 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 26 40 9.1E-6 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS19555 774a551462838baa77570835aad5238d 447 SMART SM00345 7 66 1.4E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS19555 774a551462838baa77570835aad5238d 447 Gene3D G3DSA:1.10.10.10 1 68 3.2E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS19555 774a551462838baa77570835aad5238d 447 Gene3D G3DSA:3.90.1150.10 354 446 2.0E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 SUPERFAMILY SSF53850 96 288 9.41E-29 T 28-03-2018 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 Pfam PF03466 LysR substrate binding domain 97 272 7.0E-28 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 Gene3D G3DSA:1.10.10.10 9 93 2.0E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 SUPERFAMILY SSF46785 11 119 2.12E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 2.4E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 Gene3D G3DSA:3.40.190.10 94 182 9.0E-14 T 28-03-2018 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 Gene3D G3DSA:3.40.190.10 183 262 7.3E-16 T 28-03-2018 CI104_RS17555 268d687ce50e3c0d8086a3528dd9888e 312 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 71 7.6E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS25260 0687d19c1fb34f7905db89f7af4cceb7 309 SUPERFAMILY SSF51395 29 287 3.11E-6 T 28-03-2018 CI104_RS25260 0687d19c1fb34f7905db89f7af4cceb7 309 Gene3D G3DSA:3.20.20.70 180 300 0.019 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS25260 0687d19c1fb34f7905db89f7af4cceb7 309 Gene3D G3DSA:3.20.20.70 13 177 1.4E-5 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 SUPERFAMILY SSF54373 175 275 5.49E-43 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 SUPERFAMILY SSF51905 274 356 7.5E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 SUPERFAMILY SSF51905 1 172 7.5E-53 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 Pfam PF01494 FAD binding domain 2 342 3.5E-84 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 Gene3D G3DSA:3.30.9.10 168 281 3.7E-46 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 Gene3D G3DSA:3.30.9.10 313 388 6.4E-12 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 TIGRFAM TIGR02360 pbenz_hydroxyl: 4-hydroxybenzoate 3-monooxygenase 1 390 7.7E-198 T 28-03-2018 IPR012733 4-hydroxybenzoate 3-monooxygenase GO:0018659|GO:0043639|GO:0050660|GO:0055114 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 Gene3D G3DSA:3.50.50.60 1 167 5.3E-13 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 293 309 3.6E-30 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 151 166 3.6E-30 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 278 293 3.6E-30 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 310 328 3.6E-30 T 28-03-2018 CI104_RS21295 d4155aaabe014e4d49cb03e07028fda9 395 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 4 26 3.6E-30 T 28-03-2018 CI104_RS22885 a2bbcb9dc149cec67dde26dec8eff3f2 182 SUPERFAMILY SSF49401 31 182 1.89E-33 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22885 a2bbcb9dc149cec67dde26dec8eff3f2 182 Gene3D G3DSA:2.60.40.1090 29 182 2.5E-29 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22885 a2bbcb9dc149cec67dde26dec8eff3f2 182 Pfam PF00419 Fimbrial protein 33 182 4.4E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS03300 e7da72a0017dd39722d2aa37c9eec77a 104 Pfam PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system 22 93 9.4E-19 T 28-03-2018 IPR018669 Toxin-antitoxin system, toxin component, HigB, putative GO:0016788 CI104_RS03420 654e6d0f30550944feb510bb0dd622a4 60 ProDom PD052090 YDCA PRECURSOR SIGNAL ECS2024 1 58 1.0E-10 T 28-03-2018 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 Gene3D G3DSA:3.40.228.10 549 628 5.0E-14 T 28-03-2018 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 TIGRFAM TIGR01553 formate-DH-alph: formate dehydrogenase-N alpha subunit 1 803 0.0 T 28-03-2018 IPR006443 Formate dehydrogenase-N, alpha subunit GO:0008863|GO:0009055|GO:0043546|GO:0045333|GO:0047111 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 SUPERFAMILY SSF50692 618 648 5.8E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 SUPERFAMILY SSF50692 675 804 5.8E-43 T 28-03-2018 IPR009010 Aspartate decarboxylase-like domain CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 Pfam PF00384 Molybdopterin oxidoreductase 2 377 6.5E-22 T 28-03-2018 IPR006656 Molybdopterin oxidoreductase GO:0016491|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 Gene3D G3DSA:3.40.50.740 273 449 1.8E-25 T 28-03-2018 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 Pfam PF01568 Molydopterin dinucleotide binding domain 682 797 3.4E-18 T 28-03-2018 IPR006657 Molybdopterin dinucleotide-binding domain GO:0016491|GO:0030151|GO:0055114 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 ProSitePatterns PS00932 Prokaryotic molybdopterin oxidoreductases signature 3. 716 743 - T 28-03-2018 IPR006655 Molybdopterin oxidoreductase, prokaryotic, conserved site GO:0009055|GO:0016491|GO:0055114 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 Gene3D G3DSA:3.40.228.10 1 270 3.7E-70 T 28-03-2018 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 Gene3D G3DSA:2.40.40.20 629 804 1.4E-40 T 28-03-2018 CI104_RS24390 07dfe189f617061519d45e2931e9cf9d 804 SUPERFAMILY SSF53706 1 639 9.95E-232 T 28-03-2018 CI104_RS08345 9bcc64fde50d4455237bafaf1e39e502 253 Gene3D G3DSA:3.60.10.10 1 252 3.0E-33 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS08345 9bcc64fde50d4455237bafaf1e39e502 253 SUPERFAMILY SSF56219 7 251 3.8E-52 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS08345 9bcc64fde50d4455237bafaf1e39e502 253 Pfam PF03372 Endonuclease/Exonuclease/phosphatase family 33 244 1.6E-14 T 28-03-2018 IPR005135 Endonuclease/exonuclease/phosphatase CI104_RS18840 ab858d756238230101500c369439cfda 318 PIRSF PIRSF005427 1 318 6.1E-99 T 28-03-2018 IPR005588 MucB/RseB CI104_RS18840 ab858d756238230101500c369439cfda 318 Pfam PF03888 MucB/RseB N-terminal domain 28 207 6.6E-61 T 28-03-2018 IPR033434 MucB/RseB, N-terminal CI104_RS18840 ab858d756238230101500c369439cfda 318 Pfam PF17188 MucB/RseB C-terminal domain 217 313 1.0E-28 T 28-03-2018 IPR033436 MucB/RseB, C-terminal CI104_RS18840 ab858d756238230101500c369439cfda 318 Gene3D G3DSA:2.50.20.10 19 287 8.3E-20 T 28-03-2018 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 TIGRFAM TIGR01582 FDH-beta: formate dehydrogenase, beta subunit 7 290 3.5E-143 T 28-03-2018 IPR006470 Formate dehydrogenase iron-sulphur subunit, Proteobacteria GO:0015944|GO:0016021|GO:0045333|GO:0051539 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Gene3D G3DSA:3.30.70.20 114 152 1.6E-16 T 28-03-2018 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 133 144 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Gene3D G3DSA:3.30.70.20 9 41 0.0076 T 28-03-2018 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Gene3D G3DSA:3.30.70.20 153 255 1.9E-23 T 28-03-2018 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 PIRSF PIRSF036298 1 294 9.0E-160 T 28-03-2018 IPR014603 Formate dehydrogenase iron-sulphur subunit GO:0015944|GO:0045333|GO:0051539 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 SUPERFAMILY SSF54862 26 275 4.92E-70 T 28-03-2018 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Gene3D G3DSA:3.30.70.20 42 113 2.1E-20 T 28-03-2018 CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Pfam PF13247 4Fe-4S dicluster domain 92 188 1.3E-25 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Pfam PF09163 Formate dehydrogenase N, transmembrane 246 289 2.7E-18 T 28-03-2018 IPR015246 Formate dehydrogenase, transmembrane CI104_RS13140 40cae775fb72cc876488817d7ea2d8f0 294 Gene3D G3DSA:1.20.5.480 256 291 4.3E-22 T 28-03-2018 CI104_RS25205 110a177493d4c0387c3eddf4d8ec3522 345 SUPERFAMILY SSF53850 27 337 5.98E-98 T 28-03-2018 CI104_RS25205 110a177493d4c0387c3eddf4d8ec3522 345 Gene3D G3DSA:3.40.190.10 160 336 5.7E-27 T 28-03-2018 CI104_RS25205 110a177493d4c0387c3eddf4d8ec3522 345 Gene3D G3DSA:3.40.190.10 25 159 3.4E-31 T 28-03-2018 CI104_RS25205 110a177493d4c0387c3eddf4d8ec3522 345 TIGRFAM TIGR00975 3a0107s03: phosphate ABC transporter, phosphate-binding protein PstS 28 334 1.1E-128 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CI104_RS25205 110a177493d4c0387c3eddf4d8ec3522 345 PIRSF PIRSF002756 2 337 8.0E-107 T 28-03-2018 IPR005673 Phosphate ABC transporter, substrate-binding protein PstS GO:0035435|GO:0042301|GO:0043190 CI104_RS25205 110a177493d4c0387c3eddf4d8ec3522 345 Pfam PF12849 PBP superfamily domain 24 306 9.0E-63 T 28-03-2018 IPR024370 PBP domain CI104_RS15555 87cddd1968f7246e4df63afde4e80990 192 Hamap MF_01891 Flagellar transcriptional regulator FlhC [flhC]. 1 186 45.381 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CI104_RS15555 87cddd1968f7246e4df63afde4e80990 192 SUPERFAMILY SSF160930 5 160 4.58E-64 T 28-03-2018 CI104_RS15555 87cddd1968f7246e4df63afde4e80990 192 ProDom PD016592 ACTIVATOR TRANSCRIPTIONAL FLAGELLUM FLAGELLAR TRANSCRIPTION FLHC RNA DNA-BINDING REGULATION DNA-DIRECTED 1 192 5.0E-106 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CI104_RS15555 87cddd1968f7246e4df63afde4e80990 192 Pfam PF05280 Flagellar transcriptional activator (FlhC) 1 172 3.2E-82 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CI104_RS15555 87cddd1968f7246e4df63afde4e80990 192 PIRSF PIRSF003159 1 181 9.9E-92 T 28-03-2018 IPR007944 Flagellar transcriptional activator FlhC GO:0003677|GO:0045893|GO:1902208 CI104_RS15070 6a7aa04c85785fe6294acc822c5f16dd 194 TIGRFAM TIGR00752 slp: outer membrane lipoprotein, Slp family 7 190 1.7E-80 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CI104_RS15070 6a7aa04c85785fe6294acc822c5f16dd 194 Pfam PF03843 Outer membrane lipoprotein Slp family 20 166 8.1E-48 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CI104_RS15070 6a7aa04c85785fe6294acc822c5f16dd 194 PIRSF PIRSF004982 5 190 1.1E-54 T 28-03-2018 IPR004658 Outer membrane lipoprotein Slp GO:0019867 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 SMART SM00345 31 90 5.9E-17 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 SUPERFAMILY SSF53383 95 460 2.85E-79 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 Gene3D G3DSA:1.10.10.10 18 91 8.8E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 Pfam PF00155 Aminotransferase class I and II 142 451 1.6E-27 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 SUPERFAMILY SSF46785 20 99 1.68E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 Gene3D G3DSA:3.40.640.10 119 368 1.0E-43 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 64 1.8E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 64 80 1.8E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 Pfam PF00392 Bacterial regulatory proteins, gntR family 29 90 1.0E-16 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS06530 7d898df94b92c1de66847827f055d4dd 475 Gene3D G3DSA:3.90.1150.10 369 462 5.5E-15 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 PIRSF PIRSF001123 3 357 2.0E-92 T 28-03-2018 IPR008007 Peptidase M42 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 SUPERFAMILY SSF53187 6 82 5.82E-53 T 28-03-2018 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 SUPERFAMILY SSF53187 172 351 5.82E-53 T 28-03-2018 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 Gene3D G3DSA:3.40.630.10 169 355 3.6E-32 T 28-03-2018 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 SUPERFAMILY SSF101821 72 180 2.75E-26 T 28-03-2018 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 Pfam PF05343 M42 glutamyl aminopeptidase 46 346 1.4E-89 T 28-03-2018 IPR008007 Peptidase M42 CI104_RS13495 39338832ef33c58c1578454a615744c2 373 Gene3D G3DSA:2.40.30.40 71 163 1.1E-25 T 28-03-2018 IPR023367 Peptidase M42, domain 2 CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 Gene3D G3DSA:2.40.50.100 212 354 7.5E-4 T 28-03-2018 CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 68 301 1.4E-8 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 Pfam PF00529 HlyD membrane-fusion protein of T1SS 39 367 8.0E-13 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 SUPERFAMILY SSF111369 59 115 1.03E-12 T 28-03-2018 CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 SUPERFAMILY SSF111369 144 165 1.03E-12 T 28-03-2018 CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 SUPERFAMILY SSF111369 198 302 1.03E-12 T 28-03-2018 CI104_RS00770 dd25c8d2d31c72293c2a906b06375673 378 Gene3D G3DSA:2.40.50.100 62 157 7.9E-10 T 28-03-2018 CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 Gene3D G3DSA:1.10.10.10 1 81 4.8E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 SUPERFAMILY SSF46785 1 84 2.06E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 SUPERFAMILY SSF53850 87 295 1.1E-34 T 28-03-2018 CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 61 1.7E-17 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 Gene3D G3DSA:3.40.190.10 88 184 1.4E-17 T 28-03-2018 CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 Gene3D G3DSA:3.40.190.10 185 265 1.2E-14 T 28-03-2018 CI104_RS07740 48f325d832a29e22c4059675ce50d85f 308 Pfam PF03466 LysR substrate binding domain 86 284 2.7E-35 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS24445 abf8aa75e28af981678d245b0657cf50 145 Pfam PF02580 D-Tyr-tRNA(Tyr) deacylase 3 143 8.4E-54 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CI104_RS24445 abf8aa75e28af981678d245b0657cf50 145 Hamap MF_00518 D-aminoacyl-tRNA deacylase [dtd]. 1 145 34.814 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CI104_RS24445 abf8aa75e28af981678d245b0657cf50 145 TIGRFAM TIGR00256 TIGR00256: D-tyrosyl-tRNA(Tyr) deacylase 1 145 4.2E-75 T 28-03-2018 IPR003732 D-aminoacyl-tRNA deacylase DTD GO:0002161|GO:0005737|GO:0051499 CI104_RS24445 abf8aa75e28af981678d245b0657cf50 145 Gene3D G3DSA:3.50.80.10 1 145 1.6E-54 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CI104_RS24445 abf8aa75e28af981678d245b0657cf50 145 SUPERFAMILY SSF69500 1 144 1.96E-56 T 28-03-2018 IPR023509 D-Tyr tRNAtyr deacylase-like domain CI104_RS08705 fb61a2b4b33b1d5c47f31fda175c6389 158 Pfam PF10722 Putative bacterial sensory transduction regulator 8 131 8.9E-16 T 28-03-2018 IPR019660 Putative sensory transduction regulator YbjN CI104_RS22170 d30c77f17d14ddd33c3826da07947296 258 Pfam PF14188 Domain of unknown function (DUF4311) 25 237 7.5E-124 T 28-03-2018 IPR020042 Protein of unknown function DUF4311 CI104_RS22170 d30c77f17d14ddd33c3826da07947296 258 TIGRFAM TIGR03580 EF_0832: conserved hypothetical protein EF_0832/AHA_3913 2 258 5.1E-158 T 28-03-2018 IPR020042 Protein of unknown function DUF4311 CI104_RS07820 e9e3b140337323e0df62adbd27d073f2 317 Pfam PF08349 Protein of unknown function (DUF1722) 191 308 2.9E-42 T 28-03-2018 IPR013560 Domain of unknown function DUF1722 CI104_RS07820 e9e3b140337323e0df62adbd27d073f2 317 PIRSF PIRSF037004 1 317 4.7E-132 T 28-03-2018 IPR017087 Uncharacterised conserved protein UCP037004 CI104_RS07820 e9e3b140337323e0df62adbd27d073f2 317 Pfam PF04463 Protein of unknown function (DUF523) 7 148 8.3E-38 T 28-03-2018 IPR007553 Domain of unknown function DUF523 CI104_RS18980 ab700d6a8600645d3cde7bde5e555cc0 356 Gene3D G3DSA:3.20.20.70 9 356 2.3E-130 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18980 ab700d6a8600645d3cde7bde5e555cc0 356 PIRSF PIRSF001361 1 354 1.8E-164 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CI104_RS18980 ab700d6a8600645d3cde7bde5e555cc0 356 SUPERFAMILY SSF51569 8 345 3.02E-135 T 28-03-2018 CI104_RS18980 ab700d6a8600645d3cde7bde5e555cc0 356 TIGRFAM TIGR00034 aroFGH: 3-deoxy-7-phosphoheptulonate synthase 8 350 5.4E-175 T 28-03-2018 IPR006219 DHAP synthase, class 1 GO:0003849|GO:0009073 KEGG: 00400+2.5.1.54|MetaCyc: PWY-6164 CI104_RS18980 ab700d6a8600645d3cde7bde5e555cc0 356 Pfam PF00793 DAHP synthetase I family 40 340 1.3E-108 T 28-03-2018 IPR006218 DAHP synthetase I/KDSA GO:0009058 KEGG: 00540+2.5.1.55|MetaCyc: PWY-1269|MetaCyc: PWY-7674 CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 Pfam PF02801 Beta-ketoacyl synthase, C-terminal domain 255 364 1.1E-28 T 28-03-2018 IPR014031 Beta-ketoacyl synthase, C-terminal CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 Pfam PF00109 Beta-ketoacyl synthase, N-terminal domain 3 247 5.8E-43 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 Gene3D G3DSA:3.40.47.10 261 408 1.7E-36 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 SUPERFAMILY SSF53901 3 252 1.81E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 ProSitePatterns PS00606 Beta-ketoacyl synthases active site. 156 172 - T 28-03-2018 IPR018201 Beta-ketoacyl synthase, active site CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 SMART SM00825 Beta-ketoacyl synthase 5 408 4.0E-12 T 28-03-2018 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 Gene3D G3DSA:3.40.47.10 5 260 6.7E-56 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS01260 e80d6d80c6f54f4e601dfa397ba2fa35 409 SUPERFAMILY SSF53901 216 408 5.76E-59 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS15680 0efb4f8219733568805a83a575b79349 857 SUPERFAMILY SSF103515 544 857 7.59E-50 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS15680 0efb4f8219733568805a83a575b79349 857 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 393 857 2.8E-109 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS15680 0efb4f8219733568805a83a575b79349 857 Gene3D G3DSA:2.40.128.130 536 857 1.0E-48 T 28-03-2018 CI104_RS15680 0efb4f8219733568805a83a575b79349 857 SUPERFAMILY SSF51126 6 494 2.45E-34 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS15680 0efb4f8219733568805a83a575b79349 857 Pfam PF03212 Pertactin 375 492 2.3E-14 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS15680 0efb4f8219733568805a83a575b79349 857 Gene3D G3DSA:2.160.20.20 2 498 5.9E-50 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS15680 0efb4f8219733568805a83a575b79349 857 SMART SM00869 578 846 6.0E-41 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS15680 0efb4f8219733568805a83a575b79349 857 Pfam PF03797 Autotransporter beta-domain 581 835 4.4E-48 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 PRINTS PR01374 Gram-negative bacterial tonB protein signature 89 99 1.2E-39 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 PRINTS PR01374 Gram-negative bacterial tonB protein signature 173 191 1.2E-39 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 PRINTS PR01374 Gram-negative bacterial tonB protein signature 152 173 1.2E-39 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 PRINTS PR01374 Gram-negative bacterial tonB protein signature 192 209 1.2E-39 T 28-03-2018 IPR003538 Gram-negative bacterial TonB protein GO:0015343|GO:0015891|GO:0030288|GO:0031992 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 TIGRFAM TIGR01352 tonB_Cterm: TonB family C-terminal domain 158 229 1.5E-19 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 Pfam PF16031 TonB N-terminal region 33 153 1.9E-30 T 28-03-2018 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 SUPERFAMILY SSF74653 150 219 9.81E-21 T 28-03-2018 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 Gene3D G3DSA:3.30.2420.10 161 236 8.7E-20 T 28-03-2018 CI104_RS14230 566b5ae50f7eda438d50225de6bc7d3d 236 Pfam PF03544 Gram-negative bacterial TonB protein C-terminal 157 225 4.1E-18 T 28-03-2018 IPR006260 TonB, C-terminal GO:0006810 CI104_RS23990 23a833d25dcb56d60ba461f10d88c3a6 118 TIGRFAM TIGR00829 FRU: PTS system, Fru family, IIB component 10 91 2.0E-28 T 28-03-2018 IPR003353 Phosphotransferase system, fructose-specific IIB subunit GO:0009401|GO:0022877 KEGG: 00051+2.7.1.202|KEGG: 00230+2.7.1.20|MetaCyc: PWY-6619 CI104_RS23990 23a833d25dcb56d60ba461f10d88c3a6 118 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 11 99 1.1E-14 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS23990 23a833d25dcb56d60ba461f10d88c3a6 118 SUPERFAMILY SSF52794 9 103 2.62E-30 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS23990 23a833d25dcb56d60ba461f10d88c3a6 118 Gene3D G3DSA:3.40.50.2300 8 106 5.5E-37 T 28-03-2018 CI104_RS09550 45708ead42af45452c705ac2bfaa9531 500 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 208 370 7.5E-18 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CI104_RS09550 45708ead42af45452c705ac2bfaa9531 500 Pfam PF17482 Phage tail sheath C-terminal domain 378 491 2.3E-9 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CI104_RS09550 45708ead42af45452c705ac2bfaa9531 500 PIRSF PIRSF007349 1 493 4.8E-159 T 28-03-2018 IPR007067 Tail sheath protein CI104_RS04285 5ce1e10ccf1570a833f0dffccf4c12fe 459 Gene3D G3DSA:3.40.50.2300 357 459 6.1E-17 T 28-03-2018 CI104_RS04285 5ce1e10ccf1570a833f0dffccf4c12fe 459 SUPERFAMILY SSF52794 369 455 1.52E-21 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS04285 5ce1e10ccf1570a833f0dffccf4c12fe 459 TIGRFAM TIGR00851 mtlA: PTS system, mannitol-specific IIC component 9 344 1.4E-144 T 28-03-2018 IPR004718 Phosphotransferase system, mannitol-specific enzyme IIC GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.197|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS04285 5ce1e10ccf1570a833f0dffccf4c12fe 459 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 372 446 5.1E-11 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS04285 5ce1e10ccf1570a833f0dffccf4c12fe 459 Pfam PF02378 Phosphotransferase system, EIIC 20 277 5.7E-20 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS14165 79a38994e94f4954884a8adb99a91167 293 SUPERFAMILY SSF89550 172 286 6.54E-52 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS14165 79a38994e94f4954884a8adb99a91167 293 SUPERFAMILY SSF89550 9 90 6.54E-52 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS14165 79a38994e94f4954884a8adb99a91167 293 Gene3D G3DSA:3.20.20.140 9 265 2.1E-39 T 28-03-2018 CI104_RS14165 79a38994e94f4954884a8adb99a91167 293 Pfam PF02811 PHP domain 11 165 3.9E-8 T 28-03-2018 IPR004013 PHP domain GO:0003824 CI104_RS14165 79a38994e94f4954884a8adb99a91167 293 SMART SM00481 10 77 1.1E-18 T 28-03-2018 IPR003141 Polymerase/histidinol phosphatase, N-terminal CI104_RS12120 4939caab6f33213e7206c7c444f34ef8 283 SUPERFAMILY SSF56281 20 242 9.52E-37 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS12120 4939caab6f33213e7206c7c444f34ef8 283 Gene3D G3DSA:3.60.15.10 19 244 1.5E-20 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS12120 4939caab6f33213e7206c7c444f34ef8 283 SMART SM00849 36 218 4.1E-16 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS12120 4939caab6f33213e7206c7c444f34ef8 283 Pfam PF00753 Metallo-beta-lactamase superfamily 35 218 4.4E-8 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS03165 44a6496e25203776b3735999bac14740 764 Pfam PF01228 Glycine radical 634 745 1.9E-41 T 28-03-2018 IPR001150 Glycine radical domain GO:0003824|GO:0008152 CI104_RS03165 44a6496e25203776b3735999bac14740 764 TIGRFAM TIGR01255 pyr_form_ly_1: formate acetyltransferase 15 764 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS03165 44a6496e25203776b3735999bac14740 764 SUPERFAMILY SSF51998 8 763 1.6E-281 T 28-03-2018 CI104_RS03165 44a6496e25203776b3735999bac14740 764 PIRSF PIRSF000379 12 764 0.0 T 28-03-2018 IPR005949 Formate acetyltransferase GO:0005737|GO:0005975|GO:0008861 KEGG: 00620+2.3.1.54|KEGG: 00640+2.3.1.54|KEGG: 00650+2.3.1.54|MetaCyc: PWY-5480|MetaCyc: PWY-5485|MetaCyc: PWY-5493 CI104_RS03165 44a6496e25203776b3735999bac14740 764 ProSitePatterns PS00850 Glycine radical domain signature. 734 742 - T 28-03-2018 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CI104_RS03165 44a6496e25203776b3735999bac14740 764 Pfam PF02901 Pyruvate formate lyase-like 26 618 3.4E-194 T 28-03-2018 IPR004184 Pyruvate formate lyase domain GO:0003824 CI104_RS03165 44a6496e25203776b3735999bac14740 764 Gene3D G3DSA:3.20.70.20 6 764 5.1E-281 T 28-03-2018 CI104_RS28545 a4569217abc763eab3b2131f86a22632 571 Gene3D G3DSA:1.10.150.130 217 344 7.9E-15 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS28545 a4569217abc763eab3b2131f86a22632 571 Gene3D G3DSA:1.10.443.10 347 567 1.6E-28 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS28545 a4569217abc763eab3b2131f86a22632 571 Pfam PF00589 Phage integrase family 377 548 7.8E-16 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS28545 a4569217abc763eab3b2131f86a22632 571 SUPERFAMILY SSF56349 224 558 3.24E-33 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS28545 a4569217abc763eab3b2131f86a22632 571 Pfam PF12482 Phage integrase protein 100 190 2.1E-27 T 28-03-2018 IPR022169 Protein of unknown function DUF3701 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 SUPERFAMILY SSF63380 9 105 9.36E-21 T 28-03-2018 IPR017938 Riboflavin synthase-like beta-barrel GO:0016491|GO:0055114 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 SUPERFAMILY SSF54292 221 321 3.41E-25 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 Pfam PF00175 Oxidoreductase NAD-binding domain 116 210 1.4E-8 T 28-03-2018 IPR001433 Oxidoreductase FAD/NAD(P)-binding GO:0016491|GO:0055114 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 115 134 5.3E-6 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 197 205 5.3E-6 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 PRINTS PR00409 Phthalate dioxygenase reductase family signature 55 69 5.3E-6 T 28-03-2018 IPR000951 Phthalate dioxygenase reductase GO:0016491 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 Gene3D G3DSA:3.10.20.30 236 322 2.5E-18 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 SUPERFAMILY SSF52343 102 232 2.88E-25 T 28-03-2018 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 250 315 2.5E-14 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 Gene3D G3DSA:3.40.50.80 106 232 3.3E-19 T 28-03-2018 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 Gene3D G3DSA:2.40.30.10 8 105 4.2E-17 T 28-03-2018 CI104_RS08805 f22482df3473e31e532e39b653c5e90c 322 Pfam PF00970 Oxidoreductase FAD-binding domain 36 104 5.8E-7 T 28-03-2018 IPR008333 Oxidoreductase, FAD-binding domain Reactome: R-HSA-1237044 CI104_RS12315 2b77063959bf4ad5598fb4effffdfa05 574 Gene3D G3DSA:3.30.870.10 188 375 1.9E-8 T 28-03-2018 CI104_RS12315 2b77063959bf4ad5598fb4effffdfa05 574 Pfam PF13091 PLD-like domain 210 335 1.1E-9 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS12315 2b77063959bf4ad5598fb4effffdfa05 574 Gene3D G3DSA:3.30.870.10 376 535 2.5E-6 T 28-03-2018 CI104_RS12315 2b77063959bf4ad5598fb4effffdfa05 574 SUPERFAMILY SSF56024 209 337 2.54E-10 T 28-03-2018 CI104_RS12315 2b77063959bf4ad5598fb4effffdfa05 574 SUPERFAMILY SSF56024 376 523 1.73E-7 T 28-03-2018 CI104_RS02220 5400700af6fee2669d123b0d507f6641 374 Pfam PF02481 DNA recombination-mediator protein A 71 274 3.3E-68 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CI104_RS02220 5400700af6fee2669d123b0d507f6641 374 TIGRFAM TIGR00732 dprA: DNA protecting protein DprA 66 283 4.0E-78 T 28-03-2018 IPR003488 DNA recombination-mediator protein A GO:0009294 CI104_RS02220 5400700af6fee2669d123b0d507f6641 374 Gene3D G3DSA:1.10.10.10 276 362 6.5E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02220 5400700af6fee2669d123b0d507f6641 374 Gene3D G3DSA:3.40.50.450 109 252 1.4E-32 T 28-03-2018 CI104_RS02220 5400700af6fee2669d123b0d507f6641 374 SUPERFAMILY SSF102405 80 283 7.78E-36 T 28-03-2018 CI104_RS04155 2d626f0d1cc8c6df979897c2b1a31315 239 Pfam PF02390 Putative methyltransferase 64 233 1.7E-61 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CI104_RS04155 2d626f0d1cc8c6df979897c2b1a31315 239 Gene3D G3DSA:3.40.50.150 30 239 1.8E-27 T 28-03-2018 CI104_RS04155 2d626f0d1cc8c6df979897c2b1a31315 239 SUPERFAMILY SSF53335 18 237 3.66E-38 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS04155 2d626f0d1cc8c6df979897c2b1a31315 239 Hamap MF_01057 tRNA (guanine-N(7)-)-methyltransferase [trmB]. 24 238 30.213 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CI104_RS04155 2d626f0d1cc8c6df979897c2b1a31315 239 TIGRFAM TIGR00091 TIGR00091: tRNA (guanine-N(7)-)-methyltransferase 49 238 5.4E-74 T 28-03-2018 IPR003358 tRNA (guanine-N-7) methyltransferase, Trmb type GO:0006400|GO:0008176 Reactome: R-HSA-6782315 CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 SUPERFAMILY SSF52821 9 63 3.4E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 SUPERFAMILY SSF52821 91 151 3.4E-21 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 Gene3D G3DSA:3.40.250.10 3 133 2.0E-19 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 Gene3D G3DSA:3.40.50.300 134 355 2.3E-4 T 28-03-2018 CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 Pfam PF00581 Rhodanese-like domain 10 47 2.0E-4 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 SMART SM00450 1 131 3.2E-12 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 Hamap MF_01622 tRNA 2-selenouridine synthase [selU]. 1 356 47.593 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CI104_RS06960 f729442f9d191bc89b5b71a289f88629 356 TIGRFAM TIGR03167 tRNA_sel_U_synt: tRNA 2-selenouridine synthase 15 342 8.8E-105 T 28-03-2018 IPR017582 tRNA 2-selenouridine synthase GO:0016785|GO:0043828|GO:0070329 CI104_RS06250 374bacd45d4c7f402422c08014379533 230 SUPERFAMILY SSF46785 5 62 2.57E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06250 374bacd45d4c7f402422c08014379533 230 Pfam PF08279 HTH domain 7 60 1.0E-16 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CI104_RS06250 374bacd45d4c7f402422c08014379533 230 Gene3D G3DSA:1.10.10.10 2 64 5.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06250 374bacd45d4c7f402422c08014379533 230 Pfam PF13280 WYL domain 138 227 7.0E-18 T 28-03-2018 IPR026881 WYL domain CI104_RS19360 a6b246c0b313b2bc1ed44c2442a71439 121 Gene3D G3DSA:3.30.450.20 26 118 1.2E-49 T 28-03-2018 CI104_RS19360 a6b246c0b313b2bc1ed44c2442a71439 121 SUPERFAMILY SSF143737 6 118 4.58E-54 T 28-03-2018 CI104_RS19360 a6b246c0b313b2bc1ed44c2442a71439 121 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 17 117 8.5E-52 T 28-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 Pfam PF00107 Zinc-binding dehydrogenase 152 256 3.8E-29 T 28-03-2018 IPR013149 Alcohol dehydrogenase, C-terminal GO:0055114 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 Gene3D G3DSA:3.90.180.10 253 326 0.052 T 28-03-2018 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 SMART SM00829 11 325 4.1E-27 T 28-03-2018 IPR020843 Polyketide synthase, enoylreductase domain GO:0016491 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 Gene3D G3DSA:3.40.50.720 152 251 4.4E-17 T 28-03-2018 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 ProSitePatterns PS01162 Quinone oxidoreductase / zeta-crystallin signature. 141 162 - T 28-03-2018 IPR002364 Quinone oxidoreductase/zeta-crystallin, conserved site GO:0008270|GO:0016491 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 Pfam PF08240 Alcohol dehydrogenase GroES-like domain 29 88 2.1E-9 T 28-03-2018 IPR013154 Alcohol dehydrogenase, N-terminal GO:0055114 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 SUPERFAMILY SSF50129 5 142 1.34E-33 T 28-03-2018 IPR011032 GroES-like CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 Gene3D G3DSA:3.90.180.10 1 151 2.3E-39 T 28-03-2018 CI104_RS23345 1eded248b761c6ba2c259c59a3dc10f1 327 SUPERFAMILY SSF51735 113 272 2.86E-47 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11220 8e5e6eca0869a001e213fb7346f1f314 457 SUPERFAMILY SSF52540 135 339 1.49E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS11220 8e5e6eca0869a001e213fb7346f1f314 457 Gene3D G3DSA:3.40.50.300 121 361 3.3E-13 T 28-03-2018 CI104_RS11220 8e5e6eca0869a001e213fb7346f1f314 457 Pfam PF13481 AAA domain 131 298 1.5E-40 T 28-03-2018 CI104_RS03010 f1663189f01adf3def32d374735ffa81 239 SUPERFAMILY SSF100950 5 233 2.77E-61 T 28-03-2018 CI104_RS03010 f1663189f01adf3def32d374735ffa81 239 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 120 138 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CI104_RS03010 f1663189f01adf3def32d374735ffa81 239 Gene3D G3DSA:3.40.50.1360 3 233 5.5E-51 T 28-03-2018 CI104_RS03010 f1663189f01adf3def32d374735ffa81 239 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 11 225 7.4E-21 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CI104_RS23120 5e37ca40f35862f9b2ca193862b5c2a9 184 Pfam PF13238 AAA domain 5 136 2.6E-9 T 28-03-2018 CI104_RS23120 5e37ca40f35862f9b2ca193862b5c2a9 184 SUPERFAMILY SSF52540 1 177 2.8E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23120 5e37ca40f35862f9b2ca193862b5c2a9 184 TIGRFAM TIGR02322 phosphon_PhnN: phosphonate metabolism protein/1,5-bisphosphokinase (PRPP-forming) PhnN 2 175 4.8E-71 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23120 5e37ca40f35862f9b2ca193862b5c2a9 184 Hamap MF_00836 Ribose 1,5-bisphosphate phosphokinase PhnN [phnN]. 1 175 34.657 T 28-03-2018 IPR012699 Ribose 1,5-bisphosphate phosphokinase PhnN GO:0006015|GO:0033863 KEGG: 00030+2.7.4.23|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23120 5e37ca40f35862f9b2ca193862b5c2a9 184 SMART SM00072 1 178 1.5E-30 T 28-03-2018 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CI104_RS23120 5e37ca40f35862f9b2ca193862b5c2a9 184 Gene3D G3DSA:3.40.50.300 3 181 9.7E-25 T 28-03-2018 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 SMART SM00729 84 293 1.0E-15 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 Pfam PF04055 Radical SAM superfamily 91 251 3.2E-14 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 Pfam PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family 25 73 9.6E-7 T 28-03-2018 IPR031691 Lipoyl synthase, N-terminal KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 PIRSF PIRSF005963 2 321 1.8E-130 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 TIGRFAM TIGR00510 lipA: lipoyl synthase 21 321 3.8E-162 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 Hamap MF_00206 Lipoyl synthase [lipA]. 1 321 156.468 T 28-03-2018 IPR003698 Lipoyl synthase GO:0009107|GO:0016992|GO:0051539 KEGG: 00785+2.8.1.8|MetaCyc: PWY-6987|MetaCyc: PWY-7382|Reactome: R-HSA-389661 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 SUPERFAMILY SSF102114 52 316 6.54E-67 T 28-03-2018 CI104_RS07495 a5c4dc5f14d4651cc11b3e9e62ddfdbe 321 Gene3D G3DSA:3.20.20.70 28 302 2.3E-27 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24555 9eb1345be5a49877f5321d900dc67f57 169 Pfam PF04220 Der GTPase activator (YihI) 13 165 9.6E-55 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 CI104_RS24555 9eb1345be5a49877f5321d900dc67f57 169 Hamap MF_01058 Der GTPase-activating protein YihI [yihI]. 1 168 16.692 T 28-03-2018 IPR007336 Der GTPase activator GO:0005096 CI104_RS00810 8556674b2a7098ebc3d568a0bcda541c 274 SMART SM00047 127 256 2.9E-36 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CI104_RS00810 8556674b2a7098ebc3d568a0bcda541c 274 Gene3D G3DSA:1.10.530.10 70 272 2.9E-24 T 28-03-2018 CI104_RS00810 8556674b2a7098ebc3d568a0bcda541c 274 Pfam PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase 142 267 2.9E-16 T 28-03-2018 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain GO:0004040 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 Hamap MF_00105 Transcription elongation factor GreA [greA]. 2 156 33.536 T 28-03-2018 IPR028624 Transcription elongation factor GreA/GreB GO:0003677|GO:0032784|GO:0070063 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 Gene3D G3DSA:1.10.287.180 3 75 8.2E-33 T 28-03-2018 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 ProSitePatterns PS00829 Prokaryotic transcription elongation factors signature 1. 17 48 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 SUPERFAMILY SSF54534 81 157 6.28E-25 T 28-03-2018 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 TIGRFAM TIGR01462 greA: transcription elongation factor GreA 5 156 1.8E-59 T 28-03-2018 IPR006359 Transcription elongation factor GreA GO:0003677|GO:0032784 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 Pfam PF01272 Transcription elongation factor, GreA/GreB, C-term 83 157 3.0E-29 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 Pfam PF03449 Transcription elongation factor, N-terminal 4 74 7.0E-32 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 PIRSF PIRSF006092 1 158 2.8E-55 T 28-03-2018 IPR023459 Transcription elongation factor GreA/GreB family GO:0070063 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 ProSitePatterns PS00830 Prokaryotic transcription elongation factors signature 2. 121 137 - T 28-03-2018 IPR018151 Transcription elongation factor, GreA/GreB, conserved site GO:0003677|GO:0032784 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 Gene3D G3DSA:3.10.50.30 76 158 2.4E-28 T 28-03-2018 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal GO:0003677|GO:0032784 CI104_RS02800 950bdd8d8faae168f68480bc86a0535d 158 SUPERFAMILY SSF46557 3 78 4.97E-29 T 28-03-2018 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal GO:0003677|GO:0032784 CI104_RS20375 c425f337f7275e143bbc47ca2ec86ab2 231 Hamap MF_00759 DNA mismatch repair protein MutH [mutH]. 1 231 154.643 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CI104_RS20375 c425f337f7275e143bbc47ca2ec86ab2 231 TIGRFAM TIGR02248 mutH_TIGR: DNA mismatch repair endonuclease MutH 11 226 1.3E-111 T 28-03-2018 IPR004230 DNA mismatch repair protein MutH GO:0003677|GO:0004519|GO:0006304 CI104_RS20375 c425f337f7275e143bbc47ca2ec86ab2 231 Gene3D G3DSA:3.40.600.10 10 229 2.5E-55 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CI104_RS20375 c425f337f7275e143bbc47ca2ec86ab2 231 SUPERFAMILY SSF52980 10 227 1.61E-77 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS20375 c425f337f7275e143bbc47ca2ec86ab2 231 SMART SM00927 59 157 7.4E-63 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CI104_RS20375 c425f337f7275e143bbc47ca2ec86ab2 231 Pfam PF02976 DNA mismatch repair enzyme MutH 59 157 4.9E-33 T 28-03-2018 IPR011337 DNA mismatch repair MutH/Restriction endonuclease, type II GO:0003677|GO:0004519 CI104_RS10760 b76c0f26821d418f9e35c5237eda8020 152 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 23 130 4.8E-16 T 28-03-2018 IPR006522 Phage virion morphogensis protein CI104_RS10760 b76c0f26821d418f9e35c5237eda8020 152 Pfam PF05069 Phage virion morphogenesis family 12 146 3.0E-22 T 28-03-2018 IPR006522 Phage virion morphogensis protein CI104_RS19120 1dc899ecff2c5b8ee53991e7c973cd49 193 Gene3D G3DSA:3.40.630.30 1 179 6.3E-28 T 28-03-2018 CI104_RS19120 1dc899ecff2c5b8ee53991e7c973cd49 193 SUPERFAMILY SSF55729 5 175 3.06E-45 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS19120 1dc899ecff2c5b8ee53991e7c973cd49 193 Pfam PF13523 Acetyltransferase (GNAT) domain 15 160 4.4E-40 T 28-03-2018 CI104_RS19120 1dc899ecff2c5b8ee53991e7c973cd49 193 TIGRFAM TIGR04431 N6_acetyl_AAC6: aminoglycoside N(6')-acetyltransferase, AacA4 family 1 182 5.5E-110 T 28-03-2018 IPR030971 Aminoglycoside N(6')-acetyltransferase, AacA4 type CI104_RS19120 1dc899ecff2c5b8ee53991e7c973cd49 193 SMART SM01006 11 55 0.0065 T 28-03-2018 IPR019432 Siderophore biosynthesis protein, conserved domain CI104_RS16060 225b240ed543b128a437ac358e3c177a 495 Pfam PF01554 MatE 48 208 9.0E-36 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS16060 225b240ed543b128a437ac358e3c177a 495 Pfam PF01554 MatE 278 439 2.1E-19 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS16060 225b240ed543b128a437ac358e3c177a 495 PIRSF PIRSF006603 30 487 7.1E-70 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS16060 225b240ed543b128a437ac358e3c177a 495 TIGRFAM TIGR00797 matE: MATE efflux family protein 48 452 1.3E-66 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS28380 ed40568ecac1fc14414908ca20f82bc0 212 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 90 202 1.5E-36 T 28-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CI104_RS28380 ed40568ecac1fc14414908ca20f82bc0 212 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 91 185 3.7E-19 T 28-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CI104_RS15565 bdd9b2b2b12a9619d69ebde1b1b54fb6 142 Gene3D G3DSA:3.40.50.620 2 142 2.4E-19 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS15565 bdd9b2b2b12a9619d69ebde1b1b54fb6 142 SUPERFAMILY SSF52402 3 139 1.95E-26 T 28-03-2018 CI104_RS15565 bdd9b2b2b12a9619d69ebde1b1b54fb6 142 PIRSF PIRSF006276 1 141 2.1E-45 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS15565 bdd9b2b2b12a9619d69ebde1b1b54fb6 142 Pfam PF00582 Universal stress protein family 3 138 6.3E-17 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 Gene3D G3DSA:3.40.50.2300 1 149 7.3E-26 T 28-03-2018 CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 SUPERFAMILY SSF52172 3 156 1.11E-30 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 Pfam PF00072 Response regulator receiver domain 8 117 9.6E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 Pfam PF12431 Transcriptional regulator 134 162 6.6E-10 T 28-03-2018 IPR028141 Transcriptional regulator CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 SMART SM00448 5 118 2.1E-21 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 PIRSF PIRSF006171 3 225 4.5E-75 T 28-03-2018 IPR024187 Signal transduction response regulator, citrate/malate metabolism GO:0001071|GO:0003677|GO:0005737|GO:0009605 CI104_RS07460 06fdf90e4faa42cf471ffbc20592af63 225 Gene3D G3DSA:1.10.10.10 163 223 0.0018 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 TIGRFAM TIGR01055 parE_Gneg: DNA topoisomerase IV, B subunit 2 625 0.0 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 SUPERFAMILY SSF55874 5 215 3.01E-69 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Gene3D G3DSA:3.30.565.10 17 216 4.9E-66 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Pfam PF00986 DNA gyrase B subunit, carboxyl terminus 556 620 2.8E-24 T 28-03-2018 IPR002288 DNA gyrase B subunit, C-terminal GO:0003677|GO:0003918|GO:0005524|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 28 171 3.5E-16 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 537 559 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 149 164 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 338 361 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 192 213 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 294 310 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 503 519 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 238 261 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 448 469 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 174 191 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 362 387 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 135 149 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 469 481 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 26 39 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR01098 Topoisomerase IV subunit B signature 311 326 4.4E-158 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 SMART SM00387 27 173 2.6E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 SUPERFAMILY SSF56719 388 621 6.02E-78 T 28-03-2018 IPR013760 DNA topoisomerase, type IIA-like domain GO:0003918|GO:0005524 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Gene3D G3DSA:3.30.230.10 217 391 2.3E-39 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 31 46 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 517 529 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 66 79 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 560 576 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 414 428 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 109 123 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 266 279 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 479 495 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 PRINTS PR00418 DNA topoisomerase II family signature 497 514 5.5E-59 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Gene3D G3DSA:3.40.50.670 396 627 2.8E-78 T 28-03-2018 IPR013759 DNA topoisomerase, type IIA, central domain GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Pfam PF01751 Toprim domain 413 521 2.1E-12 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Pfam PF00204 DNA gyrase B 218 384 3.7E-39 T 28-03-2018 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 SMART SM00433 34 624 4.3E-211 T 28-03-2018 IPR001241 DNA topoisomerase, type IIA GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 Hamap MF_00938 DNA topoisomerase 4 subunit B [parE]. 2 628 47.258 T 28-03-2018 IPR005737 DNA topoisomerase IV, subunit B, Gram-negative GO:0003677|GO:0003918|GO:0005524|GO:0005694|GO:0006265 CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 SUPERFAMILY SSF54211 217 382 4.55E-47 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS03855 170f8df95e1098a421c238357b9c1884 630 ProSitePatterns PS00177 DNA topoisomerase II signature. 416 424 - T 28-03-2018 IPR018522 DNA topoisomerase, type IIA, conserved site GO:0003677|GO:0003918|GO:0005524|GO:0006265 Reactome: R-HSA-4615885 CI104_RS17070 93223a9aa9c5a138fe30a2b8ce6e37ad 335 Pfam PF04245 37-kD nucleoid-associated bacterial protein 10 324 1.3E-96 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CI104_RS17070 93223a9aa9c5a138fe30a2b8ce6e37ad 335 Hamap MF_00730 Nucleoid-associated protein YejK [yejK]. 3 330 47.022 T 28-03-2018 IPR007358 Nucleoid-associated protein NdpA GO:0009295 CI104_RS19570 463e9672345753287390d6a965194201 136 TIGRFAM TIGR00333 nrdI: nrdI protein 5 131 1.2E-58 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CI104_RS19570 463e9672345753287390d6a965194201 136 Gene3D G3DSA:3.40.50.360 4 131 3.2E-25 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS19570 463e9672345753287390d6a965194201 136 SUPERFAMILY SSF52218 1 131 3.16E-23 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS19570 463e9672345753287390d6a965194201 136 Pfam PF07972 NrdI Flavodoxin like 5 122 1.8E-47 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CI104_RS19570 463e9672345753287390d6a965194201 136 Hamap MF_00128 Protein NrdI [nrdI]. 3 132 36.478 T 28-03-2018 IPR020852 Ribonucleotide reductase, class Ib, NrdI, bacterial CI104_RS19570 463e9672345753287390d6a965194201 136 PIRSF PIRSF005087 1 136 8.1E-54 T 28-03-2018 IPR004465 Ribonucleotide reductase Class Ib, NrdI CI104_RS13110 ddb9208a433808e69ce6350dabbbfa67 47 ProDom PD049510 RIBOSOMAL S22 30S RIBONUCLEOPROTEIN SUBUNIT D RIBOSOME- SEQUENCING DIRECT ASSOCIATED 1 44 2.0E-17 T 28-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 CI104_RS13110 ddb9208a433808e69ce6350dabbbfa67 47 Pfam PF08136 30S ribosomal protein subunit S22 family 1 43 5.1E-30 T 28-03-2018 IPR012607 Ribosomal protein S22 GO:0003735|GO:0005840|GO:0006412 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 Hamap MF_01881 Propionate kinase [tdcD]. 1 402 74.686 T 28-03-2018 IPR024917 Propionate kinase KEGG: 00640+2.7.2.15|MetaCyc: PWY-5437|MetaCyc: PWY-7013 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 Hamap MF_00020 Acetate kinase [ackA]. 1 396 161.856 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 Gene3D G3DSA:3.30.420.40 6 191 8.4E-64 T 28-03-2018 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 Gene3D G3DSA:3.30.420.40 193 401 8.3E-75 T 28-03-2018 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 SUPERFAMILY SSF53067 5 190 2.23E-64 T 28-03-2018 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PRINTS PR00471 Acetate kinase family signature 199 220 1.2E-46 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PRINTS PR00471 Acetate kinase family signature 296 309 1.2E-46 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PRINTS PR00471 Acetate kinase family signature 374 386 1.2E-46 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PRINTS PR00471 Acetate kinase family signature 318 334 1.2E-46 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PRINTS PR00471 Acetate kinase family signature 169 182 1.2E-46 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PRINTS PR00471 Acetate kinase family signature 7 18 1.2E-46 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 PIRSF PIRSF000722 3 396 1.1E-133 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 SUPERFAMILY SSF53067 153 392 1.88E-85 T 28-03-2018 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 ProSitePatterns PS01076 Acetate and butyrate kinases family signature 2. 199 216 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 ProSitePatterns PS01075 Acetate and butyrate kinases family signature 1. 7 18 - T 28-03-2018 IPR023865 Aliphatic acid kinase, short-chain, conserved site GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 Pfam PF00871 Acetokinase family 7 386 6.1E-162 T 28-03-2018 IPR000890 Aliphatic acid kinase, short-chain GO:0005622|GO:0008152|GO:0016301|GO:0016310|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS03160 8c71a3ea12c7e78581dbd26ba7dedbbe 402 TIGRFAM TIGR00016 ackA: acetate kinase 4 392 1.3E-167 T 28-03-2018 IPR004372 Acetate/propionate kinase GO:0006082|GO:0016301|GO:0016774 KEGG: 00430+2.7.2.1|KEGG: 00620+2.7.2.1|KEGG: 00640+2.7.2.1|KEGG: 00680+2.7.2.1|KEGG: 00720+2.7.2.1|MetaCyc: PWY-5482|MetaCyc: PWY-5485|MetaCyc: PWY-5497 CI104_RS09575 55140152245cd128c79341ae960b6974 361 Gene3D G3DSA:2.30.300.10 4 199 1.0E-58 T 28-03-2018 CI104_RS09575 55140152245cd128c79341ae960b6974 361 Gene3D G3DSA:2.30.300.10 237 355 3.6E-23 T 28-03-2018 CI104_RS09575 55140152245cd128c79341ae960b6974 361 SUPERFAMILY SSF69279 182 350 3.85E-45 T 28-03-2018 CI104_RS09575 55140152245cd128c79341ae960b6974 361 Pfam PF05954 Phage late control gene D protein (GPD) 35 331 4.1E-11 T 28-03-2018 CI104_RS09575 55140152245cd128c79341ae960b6974 361 PIRSF PIRSF004440 1 356 1.9E-75 T 28-03-2018 IPR026276 Baseplate protein GpP CI104_RS09575 55140152245cd128c79341ae960b6974 361 SUPERFAMILY SSF69279 8 180 1.23E-50 T 28-03-2018 CI104_RS25590 2ea2036bf10ba0db08569b59e1b6c944 246 SMART SM00382 99 231 1.3E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS25590 2ea2036bf10ba0db08569b59e1b6c944 246 SUPERFAMILY SSF52540 66 231 1.3E-27 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25590 2ea2036bf10ba0db08569b59e1b6c944 246 Gene3D G3DSA:3.40.50.300 42 229 2.3E-19 T 28-03-2018 CI104_RS25590 2ea2036bf10ba0db08569b59e1b6c944 246 PIRSF PIRSF003073 2 246 1.7E-83 T 28-03-2018 IPR028350 DNA replication protein DnaC/insertion sequence putative ATP-binding protein CI104_RS25590 2ea2036bf10ba0db08569b59e1b6c944 246 Pfam PF01695 IstB-like ATP binding protein 56 230 2.6E-59 T 28-03-2018 IPR002611 IstB-like ATP-binding protein GO:0005524 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 TIGRFAM TIGR00077 lspA: signal peptidase II 1 163 3.8E-60 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 ProSitePatterns PS00855 Signal peptidases II signature. 104 116 - T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 Hamap MF_00161 Lipoprotein signal peptidase [lspA]. 7 162 16.957 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 Pfam PF01252 Signal peptidase (SPase) II 16 155 2.7E-36 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 53 61 1.5E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 101 116 1.5E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS04550 8fb001d1a832b889e26c177246d27b60 165 PRINTS PR00781 Lipoprotein signal peptidase family (A8) signature 137 153 1.5E-19 T 28-03-2018 IPR001872 Peptidase A8, signal peptidase II GO:0004190|GO:0006508|GO:0016020 CI104_RS10650 a91032460d06af602081f89797c4ba8e 98 Gene3D G3DSA:1.10.287.1080 2 91 8.0E-5 T 28-03-2018 CI104_RS10650 a91032460d06af602081f89797c4ba8e 98 SUPERFAMILY SSF101386 19 63 1.14E-5 T 28-03-2018 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 SUPERFAMILY SSF52540 267 499 1.94E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 SMART SM00382 301 486 2.4E-9 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 SMART SM00382 37 254 0.015 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 Pfam PF12698 ABC-2 family transporter protein 569 903 2.1E-37 T 28-03-2018 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 Gene3D G3DSA:3.40.1710.10 578 731 6.9E-23 T 28-03-2018 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 Gene3D G3DSA:3.40.50.300 9 265 3.3E-56 T 28-03-2018 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 Gene3D G3DSA:3.40.50.300 273 557 1.2E-63 T 28-03-2018 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 SUPERFAMILY SSF52540 14 238 1.56E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 Pfam PF00005 ABC transporter 293 436 2.9E-26 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 Pfam PF00005 ABC transporter 28 175 2.1E-25 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01205 f2029bc2952e63d7202545885e7b8d73 912 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS21330 bab5e6381bf1887b725f7ee59775647a 763 Pfam PF00884 Sulfatase 163 446 4.4E-21 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS21330 bab5e6381bf1887b725f7ee59775647a 763 Gene3D G3DSA:3.40.720.10 151 449 2.5E-30 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS21330 bab5e6381bf1887b725f7ee59775647a 763 SUPERFAMILY SSF53649 161 471 1.48E-31 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS21330 bab5e6381bf1887b725f7ee59775647a 763 Hamap MF_01070 Phosphoglycerol transferase I [mdoB]. 6 738 54.676 T 28-03-2018 IPR020881 Phosphoglycerol transferase I GO:0005886|GO:0008960|GO:0009250 KEGG: 00561+2.7.8.20 CI104_RS18140 0eb598ec74438087163fc27017f28d66 169 Pfam PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 22 146 1.7E-49 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CI104_RS18140 0eb598ec74438087163fc27017f28d66 169 TIGRFAM TIGR00830 PTBA: PTS system, glucose subfamily, IIA component 23 143 4.5E-51 T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CI104_RS18140 0eb598ec74438087163fc27017f28d66 169 SUPERFAMILY SSF51261 12 167 2.09E-56 T 28-03-2018 IPR011055 Duplicated hybrid motif CI104_RS18140 0eb598ec74438087163fc27017f28d66 169 Gene3D G3DSA:2.70.70.10 9 169 2.8E-59 T 28-03-2018 CI104_RS18140 0eb598ec74438087163fc27017f28d66 169 ProSitePatterns PS00371 PTS EIIA domains phosphorylation site signature 1. 85 97 - T 28-03-2018 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 GO:0009401 CI104_RS28495 8661b3cf4deda228e8e7736d588b9f34 183 SMART SM00155 117 144 0.0049 T 28-03-2018 IPR001736 Phospholipase D/Transphosphatidylase GO:0003824 Reactome: R-HSA-1483148 CI104_RS28495 8661b3cf4deda228e8e7736d588b9f34 183 Gene3D G3DSA:3.30.870.10 26 183 2.7E-27 T 28-03-2018 CI104_RS28495 8661b3cf4deda228e8e7736d588b9f34 183 Pfam PF13091 PLD-like domain 45 173 4.8E-25 T 28-03-2018 IPR025202 Phospholipase D-like domain Reactome: R-HSA-1483148|Reactome: R-HSA-1483166 CI104_RS28495 8661b3cf4deda228e8e7736d588b9f34 183 SUPERFAMILY SSF56024 35 178 1.93E-35 T 28-03-2018 CI104_RS00775 8cc495508ff9b339525439dbec8d9d6f 324 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 66 6.8E-13 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS00775 8cc495508ff9b339525439dbec8d9d6f 324 Gene3D G3DSA:1.10.10.10 1 88 2.5E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00775 8cc495508ff9b339525439dbec8d9d6f 324 Gene3D G3DSA:3.40.190.10 171 278 3.8E-19 T 28-03-2018 CI104_RS00775 8cc495508ff9b339525439dbec8d9d6f 324 SUPERFAMILY SSF46785 4 115 3.59E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS00775 8cc495508ff9b339525439dbec8d9d6f 324 Pfam PF03466 LysR substrate binding domain 93 304 8.1E-19 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS00775 8cc495508ff9b339525439dbec8d9d6f 324 SUPERFAMILY SSF53850 94 308 2.35E-23 T 28-03-2018 CI104_RS20150 895c81e4e9c02cab5f5cb7986d8e6693 327 Gene3D G3DSA:1.10.3470.10 36 325 3.9E-36 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS20150 895c81e4e9c02cab5f5cb7986d8e6693 327 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 317 3.1E-49 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS06215 a44eed069df5cbd12e7408d6bf5e6fdd 193 PIRSF PIRSF011489 1 193 2.7E-83 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CI104_RS06215 a44eed069df5cbd12e7408d6bf5e6fdd 193 Pfam PF04336 Acyl carrier protein phosphodiesterase 81 185 7.0E-30 T 28-03-2018 IPR007431 Acyl carrier protein phosphodiesterase GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CI104_RS06215 a44eed069df5cbd12e7408d6bf5e6fdd 193 Hamap MF_01950 Acyl carrier protein phosphodiesterase [acpH]. 1 193 54.725 T 28-03-2018 IPR023491 Acyl carrier protein phosphodiesterase, gammaproteobacteria GO:0006633|GO:0008770 KEGG: 00770+3.1.4.14|MetaCyc: PWY-6012 CI104_RS05555 56e935a971381b7072654b7479c465ee 164 Pfam PF04965 Gene 25-like lysozyme 39 143 3.1E-22 T 28-03-2018 IPR007048 GpW/Gp25/anti-adapter protein IraD CI104_RS05555 56e935a971381b7072654b7479c465ee 164 SUPERFAMILY SSF160719 37 152 4.05E-10 T 28-03-2018 CI104_RS05555 56e935a971381b7072654b7479c465ee 164 Gene3D G3DSA:3.10.450.40 14 158 1.5E-21 T 28-03-2018 CI104_RS05555 56e935a971381b7072654b7479c465ee 164 TIGRFAM TIGR03357 VI_zyme: type VI secretion system lysozyme-like protein 14 159 3.1E-19 T 28-03-2018 IPR017737 Type VI secretion system, lysozyme-related protein CI104_RS10770 79123222491c25f3db450258a939f81f 317 Gene3D G3DSA:3.90.1690.10 2 317 6.5E-57 T 28-03-2018 CI104_RS16970 547a54d04ffeabf80653be8313cfa80f 393 TIGRFAM TIGR00899 2A0120: sugar efflux transporter 19 392 3.7E-190 T 28-03-2018 IPR004750 Sugar efflux GO:0008643|GO:0015542|GO:0016021 CI104_RS16970 547a54d04ffeabf80653be8313cfa80f 393 Pfam PF07690 Major Facilitator Superfamily 21 356 3.5E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS16970 547a54d04ffeabf80653be8313cfa80f 393 SUPERFAMILY SSF103473 19 390 7.32E-49 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16970 547a54d04ffeabf80653be8313cfa80f 393 Gene3D G3DSA:1.20.1250.20 14 205 3.5E-19 T 28-03-2018 CI104_RS16970 547a54d04ffeabf80653be8313cfa80f 393 Gene3D G3DSA:1.20.1250.20 212 391 4.4E-23 T 28-03-2018 CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 SUPERFAMILY SSF53807 34 292 1.02E-56 T 28-03-2018 CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 273 286 5.3E-55 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 55 73 5.3E-55 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 236 253 5.3E-55 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 184 199 5.3E-55 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 208 226 5.3E-55 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 PRINTS PR01715 Ferrichrome-binding periplasmic protein signature 86 101 5.3E-55 T 28-03-2018 IPR008091 Ferrichrome-binding periplasmic protein CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 Gene3D G3DSA:3.40.50.1980 31 122 8.4E-12 T 28-03-2018 CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 Gene3D G3DSA:3.40.50.1980 123 296 1.9E-27 T 28-03-2018 CI104_RS05210 e91dc285e7b2ff8265f132a09b50fb7c 296 Pfam PF01497 Periplasmic binding protein 38 270 1.8E-29 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CI104_RS26280 1cf762df1661d1950d4c986e7311dad0 401 SUPERFAMILY SSF57997 137 380 2.91E-6 T 28-03-2018 CI104_RS26280 1cf762df1661d1950d4c986e7311dad0 401 Gene3D G3DSA:1.20.5.50 76 196 6.5E-4 T 28-03-2018 CI104_RS26280 1cf762df1661d1950d4c986e7311dad0 401 Gene3D G3DSA:1.20.5.50 197 297 2.2E-5 T 28-03-2018 CI104_RS26280 1cf762df1661d1950d4c986e7311dad0 401 Gene3D G3DSA:1.20.5.170 298 386 1.9E-5 T 28-03-2018 CI104_RS17080 933ab16d4d8f79d8f3a111f248a0cb0f 586 SUPERFAMILY SSF53649 257 579 1.44E-54 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS17080 933ab16d4d8f79d8f3a111f248a0cb0f 586 Pfam PF11893 Domain of unknown function (DUF3413) 6 252 2.2E-105 T 28-03-2018 IPR024588 Inner membrane protein YejM, N-terminal CI104_RS17080 933ab16d4d8f79d8f3a111f248a0cb0f 586 Gene3D G3DSA:3.40.720.10 258 529 8.1E-33 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS17080 933ab16d4d8f79d8f3a111f248a0cb0f 586 Pfam PF00884 Sulfatase 260 500 2.1E-31 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS17080 933ab16d4d8f79d8f3a111f248a0cb0f 586 PIRSF PIRSF004950 6 586 2.2E-225 T 28-03-2018 IPR012159 Inner membrane protein YejM CI104_RS14970 c3c56a1aa869d4427f921ce810145e2b 209 ProDom PD037769 DNA-BINDING YHEO UNCHARACTERIZED BACTERIA SIMILAR HI0575 CONTAINING TRANSCRIPTION REGULATOR HELIX-TURN-HELIX 9 130 1.0E-54 T 28-03-2018 IPR013559 YheO-like CI104_RS14970 c3c56a1aa869d4427f921ce810145e2b 209 Gene3D G3DSA:1.10.10.60 144 208 4.8E-6 T 28-03-2018 CI104_RS14970 c3c56a1aa869d4427f921ce810145e2b 209 Pfam PF13309 HTH domain 145 205 6.1E-17 T 28-03-2018 CI104_RS14970 c3c56a1aa869d4427f921ce810145e2b 209 Pfam PF08348 YheO-like PAS domain 10 120 4.2E-34 T 28-03-2018 IPR013559 YheO-like CI104_RS04100 d79984a6eebde0a733aeae9d06f7a138 323 Pfam PF00419 Fimbrial protein 186 321 7.5E-11 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS04100 d79984a6eebde0a733aeae9d06f7a138 323 Gene3D G3DSA:2.60.40.1090 186 323 2.4E-12 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS04100 d79984a6eebde0a733aeae9d06f7a138 323 SUPERFAMILY SSF49401 187 321 7.46E-12 T 28-03-2018 IPR008966 Adhesion domain CI104_RS17435 1d1c51d6ba4ecdb4f6e115ff248d2b6b 87 Pfam PF11183 Polymyxin resistance protein PmrD 1 80 1.3E-30 T 28-03-2018 CI104_RS17435 1d1c51d6ba4ecdb4f6e115ff248d2b6b 87 ProDom PD028730 PMRD RESISTANCE POLYMYXIN B ANTIBIOTIC 1 80 2.0E-24 T 28-03-2018 IPR020146 Signal transduction protein PmrD CI104_RS08720 ac686878894d269cf0cfbe78dbbb6729 317 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 117 311 7.9E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08720 ac686878894d269cf0cfbe78dbbb6729 317 SUPERFAMILY SSF161098 27 308 1.7E-56 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08720 ac686878894d269cf0cfbe78dbbb6729 317 Gene3D G3DSA:1.10.3720.10 30 311 1.5E-41 T 28-03-2018 CI104_RS06980 b3b9520727daa693aaa81986d829a696 240 SUPERFAMILY SSF56300 2 222 3.14E-31 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06980 b3b9520727daa693aaa81986d829a696 240 Pfam PF00149 Calcineurin-like phosphoesterase 2 199 1.2E-9 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS06980 b3b9520727daa693aaa81986d829a696 240 TIGRFAM TIGR01854 lipid_A_lpxH: UDP-2,3-diacylglucosamine diphosphatase 3 232 1.3E-112 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CI104_RS06980 b3b9520727daa693aaa81986d829a696 240 Gene3D G3DSA:3.60.21.10 1 231 2.0E-24 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS06980 b3b9520727daa693aaa81986d829a696 240 Hamap MF_00575 UDP-2,3-diacylglucosamine hydrolase [lpxH]. 1 240 132.173 T 28-03-2018 IPR010138 UDP-2,3-diacylglucosamine hydrolase GO:0005737|GO:0009245|GO:0016462 KEGG: 00540+3.6.1.54 CI104_RS06875 4e71a453b747bfec04ee538320258755 237 Pfam PF02308 MgtC family 22 147 1.2E-33 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CI104_RS06875 4e71a453b747bfec04ee538320258755 237 PRINTS PR01837 MgtC/SapB protein signature 25 44 2.2E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CI104_RS06875 4e71a453b747bfec04ee538320258755 237 PRINTS PR01837 MgtC/SapB protein signature 44 62 2.2E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CI104_RS06875 4e71a453b747bfec04ee538320258755 237 PRINTS PR01837 MgtC/SapB protein signature 107 131 2.2E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CI104_RS06875 4e71a453b747bfec04ee538320258755 237 PRINTS PR01837 MgtC/SapB protein signature 79 101 2.2E-42 T 28-03-2018 IPR003416 MgtC/SapB/SrpB/YhiD family GO:0016020 CI104_RS17015 331deb4e28a74fa157717f5bc720738d 518 Gene3D G3DSA:3.20.20.450 260 516 5.2E-77 T 28-03-2018 IPR001633 EAL domain CI104_RS17015 331deb4e28a74fa157717f5bc720738d 518 SUPERFAMILY SSF141868 267 514 6.93E-73 T 28-03-2018 IPR001633 EAL domain CI104_RS17015 331deb4e28a74fa157717f5bc720738d 518 SMART SM00052 260 505 1.0E-95 T 28-03-2018 IPR001633 EAL domain CI104_RS17015 331deb4e28a74fa157717f5bc720738d 518 Pfam PF00563 EAL domain 268 500 2.7E-68 T 28-03-2018 IPR001633 EAL domain CI104_RS17015 331deb4e28a74fa157717f5bc720738d 518 Pfam PF12792 CSS motif domain associated with EAL 42 240 2.5E-40 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Hamap MF_01322 DNA-directed RNA polymerase subunit beta' [rpoC]. 10 1374 18.973 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Gene3D G3DSA:2.40.50.100 907 1021 8.6E-28 T 28-03-2018 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Gene3D G3DSA:2.40.50.100 1022 1126 2.4E-12 T 28-03-2018 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 SMART SM00663 235 514 1.1E-184 T 28-03-2018 IPR006592 RNA polymerase, N-terminal GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Pfam PF04998 RNA polymerase Rpb1, domain 5 766 1315 1.0E-77 T 28-03-2018 IPR007081 RNA polymerase Rpb1, domain 5 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 344 393 1.2E-7 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Pfam PF00623 RNA polymerase Rpb1, domain 2 392 485 3.9E-27 T 28-03-2018 IPR000722 RNA polymerase, alpha subunit GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Pfam PF04983 RNA polymerase Rpb1, domain 3 489 644 8.0E-26 T 28-03-2018 IPR007066 RNA polymerase Rpb1, domain 3 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Pfam PF05000 RNA polymerase Rpb1, domain 4 674 763 1.7E-18 T 28-03-2018 IPR007083 RNA polymerase Rpb1, domain 4 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Gene3D G3DSA:2.40.40.20 346 488 7.3E-40 T 28-03-2018 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 SUPERFAMILY SSF64484 1133 1363 0.0 T 28-03-2018 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 SUPERFAMILY SSF64484 16 944 0.0 T 28-03-2018 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Gene3D G3DSA:2.40.50.100 1153 1213 4.8E-14 T 28-03-2018 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 Pfam PF04997 RNA polymerase Rpb1, domain 1 15 342 1.2E-89 T 28-03-2018 IPR007080 RNA polymerase Rpb1, domain 1 GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS23760 37b697b4644f263d6309a8df31c62fa2 1407 TIGRFAM TIGR02386 rpoC_TIGR: DNA-directed RNA polymerase, beta' subunit 19 1367 0.0 T 28-03-2018 IPR012754 DNA-directed RNA polymerase, subunit beta-prime GO:0003677|GO:0003899|GO:0006351 KEGG: 00230+2.7.7.6|KEGG: 00240+2.7.7.6 CI104_RS07005 f2bf69e08f89381b0d9f311249129867 413 Gene3D G3DSA:1.10.287.510 256 373 0.041 T 28-03-2018 CI104_RS07005 f2bf69e08f89381b0d9f311249129867 413 Gene3D G3DSA:1.10.287.510 137 254 0.02 T 28-03-2018 CI104_RS07005 f2bf69e08f89381b0d9f311249129867 413 Gene3D G3DSA:1.20.5.340 1 77 0.015 T 28-03-2018 CI104_RS12495 1ac6b0d592d37ca3daff7879634ac182 232 PIRSF PIRSF006102 1 219 2.5E-78 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CI104_RS12495 1ac6b0d592d37ca3daff7879634ac182 232 Hamap MF_00478 Electron transport complex subunit RsxE [rsxE]. 1 210 27.43 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CI104_RS12495 1ac6b0d592d37ca3daff7879634ac182 232 Pfam PF02508 Rnf-Nqr subunit, membrane protein 6 199 1.6E-61 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CI104_RS12495 1ac6b0d592d37ca3daff7879634ac182 232 TIGRFAM TIGR01948 rnfE: electron transport complex, RnfABCDGE type, E subunit 7 209 5.0E-81 T 28-03-2018 IPR010968 Electron transport complex, RsxE GO:0016020|GO:0022900 CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 TIGRFAM TIGR00393 kpsF: sugar isomerase, KpsF/GutQ family 43 311 2.3E-133 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 Gene3D G3DSA:3.40.50.10490 2 195 2.7E-45 T 28-03-2018 CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 Gene3D G3DSA:3.10.580.10 196 319 4.0E-20 T 28-03-2018 CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 Pfam PF00571 CBS domain 201 256 0.0017 T 28-03-2018 IPR000644 CBS domain CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 Pfam PF00571 CBS domain 265 315 4.1E-5 T 28-03-2018 IPR000644 CBS domain CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 PIRSF PIRSF004692 1 321 1.1E-122 T 28-03-2018 IPR004800 Phosphosugar isomerase, KdsD/KpsF-type GO:0005975|GO:0016853 CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 SUPERFAMILY SSF53697 14 316 3.11E-52 T 28-03-2018 CI104_RS19745 4bb0ab2b1b180e3cf0d05a51b9594d92 321 Pfam PF01380 SIS domain 39 169 3.8E-29 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 Pfam PF00239 Resolvase, N terminal domain 14 166 1.4E-23 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 Pfam PF02796 Helix-turn-helix domain of resolvase 173 209 3.1E-5 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 Gene3D G3DSA:1.10.10.60 168 210 2.6E-5 T 28-03-2018 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 SUPERFAMILY SSF53041 11 166 6.15E-27 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 ProSitePatterns PS00397 Site-specific recombinases active site. 16 24 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 ProSitePatterns PS00398 Site-specific recombinases signature 2. 71 83 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 SMART SM00857 13 166 5.2E-31 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27390 d8855f96b341ff67c9c17891c45cc62d 245 Gene3D G3DSA:3.40.50.1390 7 167 5.1E-35 T 28-03-2018 CI104_RS10330 9337682debab62c224c27a1013752b37 350 Gene3D G3DSA:3.90.1150.10 10 85 0.18 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS10330 9337682debab62c224c27a1013752b37 350 Pfam PF00581 Rhodanese-like domain 138 233 2.3E-13 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS10330 9337682debab62c224c27a1013752b37 350 SMART SM00450 136 237 1.3E-24 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS10330 9337682debab62c224c27a1013752b37 350 Hamap MF_00469 UPF0176 protein YceA [yceA]. 22 277 39.304 T 28-03-2018 IPR020936 Uncharacterised protein family UPF0176 CI104_RS10330 9337682debab62c224c27a1013752b37 350 Gene3D G3DSA:3.40.250.10 130 243 5.0E-28 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS10330 9337682debab62c224c27a1013752b37 350 SUPERFAMILY SSF52821 116 270 6.02E-32 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS10330 9337682debab62c224c27a1013752b37 350 Pfam PF12368 Rhodanase C-terminal 246 307 1.4E-18 T 28-03-2018 IPR022111 Rhodanase, C-terminal CI104_RS08360 711087e47a449343310c3802e1f9d379 380 Gene3D G3DSA:3.40.1710.10 45 199 4.4E-22 T 28-03-2018 CI104_RS08360 711087e47a449343310c3802e1f9d379 380 Pfam PF12679 ABC-2 family transporter protein 13 372 8.6E-38 T 28-03-2018 IPR032688 ABC-2 family transporter protein GO:0006810 CI104_RS10360 38bdace7c242f815eb4fd0ff39ada64f 81 Pfam PF06183 DinI-like family 14 78 1.7E-28 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS10360 38bdace7c242f815eb4fd0ff39ada64f 81 SUPERFAMILY SSF54857 1 80 5.49E-29 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS10360 38bdace7c242f815eb4fd0ff39ada64f 81 Gene3D G3DSA:3.30.910.10 1 78 2.3E-33 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS27640 d36296e95478214c213691aa88e3d726 239 SUPERFAMILY SSF48657 74 214 2.62E-35 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS27640 d36296e95478214c213691aa88e3d726 239 Gene3D G3DSA:1.10.1710.10 47 221 1.4E-24 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS27640 d36296e95478214c213691aa88e3d726 239 Pfam PF04352 ProQ/FINO family 111 213 5.8E-16 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS27640 d36296e95478214c213691aa88e3d726 239 SMART SM00945 105 219 1.4E-10 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS27640 d36296e95478214c213691aa88e3d726 239 Pfam PF12602 Fertility inhibition protein N terminal 1 75 4.6E-9 T 28-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal CI104_RS08245 b93033339692e1282fca08fc74d61319 241 SMART SM00345 17 76 4.8E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08245 b93033339692e1282fca08fc74d61319 241 Gene3D G3DSA:1.10.10.10 1 76 4.1E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08245 b93033339692e1282fca08fc74d61319 241 Gene3D G3DSA:3.40.1410.10 77 240 7.9E-40 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS08245 b93033339692e1282fca08fc74d61319 241 SUPERFAMILY SSF46785 8 97 3.38E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08245 b93033339692e1282fca08fc74d61319 241 TIGRFAM TIGR02018 his_ut_repres: histidine utilization repressor 12 240 1.6E-103 T 28-03-2018 IPR010248 Histidine utilization repressor GO:0003677|GO:0006547|GO:0045892 CI104_RS08245 b93033339692e1282fca08fc74d61319 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 36 50 1.3E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08245 b93033339692e1282fca08fc74d61319 241 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 50 66 1.3E-8 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08245 b93033339692e1282fca08fc74d61319 241 Pfam PF00392 Bacterial regulatory proteins, gntR family 14 76 2.6E-22 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS08245 b93033339692e1282fca08fc74d61319 241 SMART SM00866 97 234 1.6E-34 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS08245 b93033339692e1282fca08fc74d61319 241 SUPERFAMILY SSF64288 64 239 8.95E-43 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS08245 b93033339692e1282fca08fc74d61319 241 Pfam PF07702 UTRA domain 97 234 8.0E-37 T 28-03-2018 IPR011663 UbiC transcription regulator-associated GO:0003677|GO:0006355 CI104_RS22430 ed23df58d9115a9dc1f0bf813224b97d 254 Pfam PF01925 Sulfite exporter TauE/SafE 15 249 2.3E-39 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CI104_RS26780 6ddff9ce682497bfe7acb1fb6f88c02f 456 Pfam PF13751 Transposase DDE domain 319 444 2.7E-19 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS26780 6ddff9ce682497bfe7acb1fb6f88c02f 456 Pfam PF05598 Transposase domain (DUF772) 52 128 1.0E-26 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 Gene3D G3DSA:3.30.70.120 1 108 1.2E-49 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 Pfam PF00543 Nitrogen regulatory protein P-II 4 105 1.6E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 SUPERFAMILY SSF54913 1 112 9.21E-47 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 SMART SM00938 4 105 4.8E-68 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 ProSitePatterns PS00638 P-II protein C-terminal region signature. 83 96 - T 28-03-2018 IPR017918 Nitrogen regulatory protein PII, conserved site GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 ProSitePatterns PS00496 P-II protein uridylation site. 46 51 - T 28-03-2018 IPR002332 Nitrogen regulatory protein P-II, urydylation site GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 PIRSF PIRSF039144 1 112 2.0E-57 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 PRINTS PR00340 P-II protein signature 2 17 4.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 PRINTS PR00340 P-II protein signature 23 41 4.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 PRINTS PR00340 P-II protein signature 52 75 4.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS18730 e3024e8b8a720dd17b7e4466e1e5a4ff 112 PRINTS PR00340 P-II protein signature 83 103 4.1E-44 T 28-03-2018 IPR002187 Nitrogen regulatory protein PII GO:0006808|GO:0030234 CI104_RS16270 6f039918461a9ed3615b4ddfdea15083 116 PIRSF PIRSF012296 1 116 1.1E-58 T 28-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 CI104_RS16270 6f039918461a9ed3615b4ddfdea15083 116 Pfam PF00936 BMC domain 45 107 1.0E-12 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS16270 6f039918461a9ed3615b4ddfdea15083 116 SUPERFAMILY SSF143414 44 112 7.98E-15 T 28-03-2018 CI104_RS16270 6f039918461a9ed3615b4ddfdea15083 116 SMART SM00877 44 116 1.2E-18 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 Gene3D G3DSA:2.30.40.10 1 68 3.2E-11 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 Gene3D G3DSA:2.30.40.10 349 437 1.0E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 SUPERFAMILY SSF51338 1 56 2.56E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 SUPERFAMILY SSF51338 361 435 2.56E-25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 SUPERFAMILY SSF51556 56 354 1.16E-52 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 TIGRFAM TIGR03314 Se_ssnA: putative selenium metabolism protein SsnA 2 438 7.0E-210 T 28-03-2018 IPR017700 Putative aminohydrolase SsnA CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 Pfam PF01979 Amidohydrolase family 53 410 6.5E-48 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS20950 2999e9f2068a03b635e4a5a927949b1c 442 Gene3D G3DSA:3.20.20.140 69 348 1.2E-24 T 28-03-2018 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 Gene3D G3DSA:3.50.50.60 1 365 1.6E-47 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 281 296 5.6E-20 T 28-03-2018 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 5 27 5.6E-20 T 28-03-2018 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 156 171 5.6E-20 T 28-03-2018 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 296 312 5.6E-20 T 28-03-2018 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 Pfam PF01494 FAD binding domain 4 345 3.5E-30 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 TIGRFAM TIGR01988 Ubi-OHases: ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family 5 391 2.4E-135 T 28-03-2018 IPR010971 Ubiquinone biosynthesis hydroxylase UbiH/COQ6 GO:0006744|GO:0016709|GO:0050660|GO:0055114 Reactome: R-HSA-2142789 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 SUPERFAMILY SSF51905 4 177 5.68E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 SUPERFAMILY SSF51905 268 385 5.68E-61 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS21080 16a09488209d710a25dfe7d1642aa6e1 400 ProSitePatterns PS01304 ubiH/COQ6 monooxygenase family signature. 295 308 - T 28-03-2018 IPR018168 Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6, conserved site GO:0016709|GO:0055114 Reactome: R-HSA-2142789 CI104_RS16740 2452c1a6f41a7aa0185439f8a0b329f0 243 Gene3D G3DSA:1.10.3720.10 7 243 1.4E-27 T 28-03-2018 CI104_RS16740 2452c1a6f41a7aa0185439f8a0b329f0 243 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 68 238 2.0E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS16740 2452c1a6f41a7aa0185439f8a0b329f0 243 SUPERFAMILY SSF161098 45 233 2.22E-32 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS19910 929f00efb9f8100f088b78b64322bd09 197 TIGRFAM TIGR00421 ubiX_pad: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases 2 183 3.5E-72 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CI104_RS19910 929f00efb9f8100f088b78b64322bd09 197 Pfam PF02441 Flavoprotein 1 164 7.3E-25 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS19910 929f00efb9f8100f088b78b64322bd09 197 SUPERFAMILY SSF52507 1 185 7.33E-63 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS19910 929f00efb9f8100f088b78b64322bd09 197 Hamap MF_01986 Probable UbiX-like flavin prenyltransferase. 1 189 52.262 T 28-03-2018 IPR032901 Probable UbiX-like flavin prenyltransferase CI104_RS19910 929f00efb9f8100f088b78b64322bd09 197 Gene3D G3DSA:3.40.50.1950 1 197 1.2E-55 T 28-03-2018 IPR003382 Flavoprotein GO:0003824 Reactome: R-HSA-196783 CI104_RS19910 929f00efb9f8100f088b78b64322bd09 197 Hamap MF_01984 Flavin prenyltransferase UbiX [ubiX]. 1 185 36.71 T 28-03-2018 IPR004507 Flavin prenyltransferase UbiX/Pad1 CI104_RS22300 bb8dcb5e909532cb84d2ea222c73b9c6 212 Pfam PF01625 Peptide methionine sulfoxide reductase 46 199 7.9E-67 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CI104_RS22300 bb8dcb5e909532cb84d2ea222c73b9c6 212 TIGRFAM TIGR00401 msrA: peptide-methionine (S)-S-oxide reductase 44 199 3.7E-71 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CI104_RS22300 bb8dcb5e909532cb84d2ea222c73b9c6 212 SUPERFAMILY SSF55068 5 208 2.62E-84 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CI104_RS22300 bb8dcb5e909532cb84d2ea222c73b9c6 212 Gene3D G3DSA:3.30.1060.10 26 204 3.0E-79 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CI104_RS22300 bb8dcb5e909532cb84d2ea222c73b9c6 212 Hamap MF_01401 Peptide methionine sulfoxide reductase MsrA [msrA]. 43 205 38.939 T 28-03-2018 IPR002569 Peptide methionine sulphoxide reductase MsrA GO:0008113|GO:0055114 Reactome: R-HSA-5676934 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 Pfam PF01235 Sodium:alanine symporter family 53 453 2.3E-145 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 ProSitePatterns PS00873 Sodium:alanine symporter family signature. 87 102 - T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 PRINTS PR00175 Sodium/alanine symporter signature 87 109 1.3E-51 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 PRINTS PR00175 Sodium/alanine symporter signature 206 225 1.3E-51 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 PRINTS PR00175 Sodium/alanine symporter signature 303 321 1.3E-51 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 PRINTS PR00175 Sodium/alanine symporter signature 349 371 1.3E-51 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 PRINTS PR00175 Sodium/alanine symporter signature 178 196 1.3E-51 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 PRINTS PR00175 Sodium/alanine symporter signature 410 430 1.3E-51 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS04485 5d120649f6805d3ffb097196e8a9acb7 476 TIGRFAM TIGR00835 agcS: amino acid carrier protein 13 441 1.1E-159 T 28-03-2018 IPR001463 Sodium:alanine symporter GO:0006814|GO:0015655|GO:0016020|GO:0032328 CI104_RS27920 cd27aaac5ccb45cbb929e5fb614a5af5 140 SUPERFAMILY SSF51306 17 134 5.06E-31 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS27920 cd27aaac5ccb45cbb929e5fb614a5af5 140 Gene3D G3DSA:2.10.109.10 22 136 2.2E-24 T 28-03-2018 CI104_RS27920 cd27aaac5ccb45cbb929e5fb614a5af5 140 Pfam PF00717 Peptidase S24-like 59 120 8.3E-14 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS27920 cd27aaac5ccb45cbb929e5fb614a5af5 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 53 63 2.8E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS27920 cd27aaac5ccb45cbb929e5fb614a5af5 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 92 104 2.8E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS27920 cd27aaac5ccb45cbb929e5fb614a5af5 140 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 64 75 2.8E-10 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 Pfam PF10411 Disulfide bond isomerase protein N-terminus 27 76 1.1E-15 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 Gene3D G3DSA:3.40.30.10 94 237 2.2E-29 T 28-03-2018 CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 SUPERFAMILY SSF52833 87 233 2.54E-42 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 Gene3D G3DSA:3.10.450.70 19 79 1.4E-22 T 28-03-2018 CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 ProSitePatterns PS00194 Thioredoxin family active site. 111 129 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 Pfam PF13098 Thioredoxin-like domain 105 227 7.0E-29 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS21010 e35cea042a2a72d89b2ab8834380b617 237 SUPERFAMILY SSF54423 23 81 5.1E-18 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CI104_RS21905 8eafb49add6b2b88d9ec1aa661e280fa 375 TIGRFAM TIGR03187 DGQHR: DGQHR domain 8 291 3.6E-73 T 28-03-2018 IPR017601 DGQHR-containing domain CI104_RS21905 8eafb49add6b2b88d9ec1aa661e280fa 375 Pfam PF14072 DNA-sulfur modification-associated 7 365 1.9E-33 T 28-03-2018 IPR017642 DNA sulphur modification protein DndB CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 SUPERFAMILY SSF53155 9 91 8.24E-6 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 87 166 8.9E-39 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 SUPERFAMILY SSF46767 86 169 5.36E-34 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 Pfam PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain 4 83 2.0E-16 T 28-03-2018 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 88 167 2.8E-35 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 Hamap MF_00772 Methylated-DNA--protein-cysteine methyltransferase [ogt]. 21 167 40.027 T 28-03-2018 IPR023546 Methylated-DNA--protein-cysteine methyltransferase GO:0003824|GO:0006281 CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 Gene3D G3DSA:1.10.10.10 84 170 6.8E-37 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13820 31dea4523f424ea9180fcbddbf3c5a40 171 ProSitePatterns PS00374 Methylated-DNA--protein-cysteine methyltransferase active site. 137 143 - T 28-03-2018 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site GO:0003908|GO:0006281 Reactome: R-HSA-5657655 CI104_RS00565 975a240a941958185946b72698424349 368 Gene3D G3DSA:3.40.50.2000 187 339 6.0E-26 T 28-03-2018 CI104_RS00565 975a240a941958185946b72698424349 368 SUPERFAMILY SSF53756 11 334 1.36E-50 T 28-03-2018 CI104_RS00565 975a240a941958185946b72698424349 368 Pfam PF13439 Glycosyltransferase Family 4 22 175 8.6E-10 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CI104_RS00565 975a240a941958185946b72698424349 368 Pfam PF00534 Glycosyl transferases group 1 183 339 9.0E-26 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS00565 975a240a941958185946b72698424349 368 Gene3D G3DSA:3.40.50.2000 4 186 4.0E-6 T 28-03-2018 CI104_RS22540 413f58e7bcaade79282437ed4f1e4d95 316 TIGRFAM TIGR00174 miaA: tRNA dimethylallyltransferase 12 300 2.0E-125 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CI104_RS22540 413f58e7bcaade79282437ed4f1e4d95 316 Hamap MF_00185 tRNA dimethylallyltransferase [miaA]. 12 309 29.926 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CI104_RS22540 413f58e7bcaade79282437ed4f1e4d95 316 Gene3D G3DSA:1.10.287.890 207 289 2.6E-25 T 28-03-2018 CI104_RS22540 413f58e7bcaade79282437ed4f1e4d95 316 SUPERFAMILY SSF52540 13 157 2.53E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22540 413f58e7bcaade79282437ed4f1e4d95 316 Pfam PF01715 IPP transferase 46 290 1.5E-85 T 28-03-2018 IPR018022 tRNA dimethylallyltransferase GO:0008033 KEGG: 00908+2.5.1.75|MetaCyc: PWY-2781|Reactome: R-HSA-6782315|Reactome: R-HSA-6787450 CI104_RS22540 413f58e7bcaade79282437ed4f1e4d95 316 Gene3D G3DSA:3.40.50.300 9 203 2.6E-60 T 28-03-2018 CI104_RS04815 6d7906dc639f5588f971fcb3b2dbd51f 201 Hamap MF_01031 3-isopropylmalate dehydratase small subunit [leuD]. 2 200 44.808 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CI104_RS04815 6d7906dc639f5588f971fcb3b2dbd51f 201 Pfam PF00694 Aconitase C-terminal domain 3 126 5.8E-40 T 28-03-2018 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel domain GO:0008152 KEGG: 00290+4.2.1.33 CI104_RS04815 6d7906dc639f5588f971fcb3b2dbd51f 201 TIGRFAM TIGR00171 leuD: 3-isopropylmalate dehydratase, small subunit 3 189 8.4E-102 T 28-03-2018 IPR004431 3-isopropylmalate dehydratase, small subunit GO:0003861|GO:0009098|GO:0009316 KEGG: 00290+4.2.1.33 CI104_RS04815 6d7906dc639f5588f971fcb3b2dbd51f 201 Gene3D G3DSA:3.20.19.10 1 177 3.5E-51 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS04815 6d7906dc639f5588f971fcb3b2dbd51f 201 SUPERFAMILY SSF52016 3 193 2.55E-60 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS06945 30a5095903f8d755a8c9abf518a1a871 228 SUPERFAMILY SSF52540 6 226 1.25E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06945 30a5095903f8d755a8c9abf518a1a871 228 ProSitePatterns PS00211 ABC transporters family signature. 147 161 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS06945 30a5095903f8d755a8c9abf518a1a871 228 Gene3D G3DSA:3.40.50.300 2 228 3.3E-60 T 28-03-2018 CI104_RS06945 30a5095903f8d755a8c9abf518a1a871 228 SMART SM00382 35 225 6.8E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06945 30a5095903f8d755a8c9abf518a1a871 228 Pfam PF00005 ABC transporter 27 174 1.2E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 TIGRFAM TIGR02007 fdx_isc: ferredoxin, 2Fe-2S type, ISC system 2 111 9.8E-62 T 28-03-2018 IPR011536 Ferredoxin 2Fe-2S type, proteobacteria GO:0009055|GO:0051537 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 SUPERFAMILY SSF54292 4 109 3.85E-35 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 15 92 2.0E-15 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 ProSitePatterns PS00814 Adrenodoxin family, iron-sulfur binding region signature. 42 52 - T 28-03-2018 IPR018298 Adrenodoxin, iron-sulphur binding site GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 PRINTS PR00355 Adrenodoxin signature 42 52 6.0E-11 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 PRINTS PR00355 Adrenodoxin signature 60 74 6.0E-11 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 PRINTS PR00355 Adrenodoxin signature 83 91 6.0E-11 T 28-03-2018 IPR001055 Adrenodoxin GO:0009055|GO:0051537 Reactome: R-HSA-1362409|Reactome: R-HSA-196108|Reactome: R-HSA-211976|Reactome: R-HSA-2395516|Reactome: R-HSA-5579026 CI104_RS18595 b5bc4c23351f3f3c8ccfa16126838bb4 111 Gene3D G3DSA:3.10.20.30 8 111 1.9E-34 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS09820 317c4c6e1299a7818ffda092afef6358 273 PIRSF PIRSF016184 1 262 2.0E-47 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CI104_RS09820 317c4c6e1299a7818ffda092afef6358 273 SUPERFAMILY SSF54506 3 261 5.58E-75 T 28-03-2018 CI104_RS09820 317c4c6e1299a7818ffda092afef6358 273 Gene3D G3DSA:3.10.310.10 124 250 1.6E-32 T 28-03-2018 CI104_RS09820 317c4c6e1299a7818ffda092afef6358 273 TIGRFAM TIGR00654 PhzF_family: phenazine biosynthesis protein, PhzF family 4 259 4.3E-29 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CI104_RS09820 317c4c6e1299a7818ffda092afef6358 273 Pfam PF02567 Phenazine biosynthesis-like protein 9 258 1.1E-48 T 28-03-2018 IPR003719 Phenazine biosynthesis PhzF protein GO:0003824|GO:0009058 CI104_RS09820 317c4c6e1299a7818ffda092afef6358 273 Gene3D G3DSA:3.10.310.10 1 123 1.0E-27 T 28-03-2018 CI104_RS15010 f3eb2bb79ed3521d25721073d047c3f4 225 SUPERFAMILY SSF161098 12 204 1.24E-41 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS15010 f3eb2bb79ed3521d25721073d047c3f4 225 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 33 210 2.6E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS15010 f3eb2bb79ed3521d25721073d047c3f4 225 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 12 109 2.0E-28 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS15010 f3eb2bb79ed3521d25721073d047c3f4 225 Gene3D G3DSA:1.10.3720.10 2 220 1.4E-38 T 28-03-2018 CI104_RS19145 704b7c20ace2dc6a802eb14f9a1f7001 143 Pfam PF14534 Domain of unknown function (DUF4440) 15 113 1.6E-8 T 28-03-2018 IPR027843 Domain of unknown function DUF4440 CI104_RS19145 704b7c20ace2dc6a802eb14f9a1f7001 143 SUPERFAMILY SSF54427 16 119 6.17E-19 T 28-03-2018 IPR032710 NTF2-like domain CI104_RS19145 704b7c20ace2dc6a802eb14f9a1f7001 143 Gene3D G3DSA:3.10.450.50 11 127 2.0E-17 T 28-03-2018 CI104_RS06780 3468a364625bd5bb663c6d4ec895b6df 380 Pfam PF10758 Protein of unknown function (DUF2586) 3 375 1.0E-159 T 28-03-2018 IPR019694 Bacteriophage HP1, Orf23 CI104_RS11685 3020204ccc653033ad8de863b4c474e4 452 Pfam PF00083 Sugar (and other) transporter 55 450 5.0E-36 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS11685 3020204ccc653033ad8de863b4c474e4 452 SUPERFAMILY SSF103473 8 448 2.22E-64 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS11685 3020204ccc653033ad8de863b4c474e4 452 Gene3D G3DSA:1.20.1250.20 13 214 8.0E-27 T 28-03-2018 CI104_RS11685 3020204ccc653033ad8de863b4c474e4 452 Gene3D G3DSA:1.20.1250.20 240 452 5.3E-24 T 28-03-2018 CI104_RS23460 0b33df07dcb3480221afabd89bc87a45 80 ProDom PD865006 YJBE PRECURSOR SIGNAL MEMBRANE OUTER EXPORTED 1 28 1.0E-7 T 28-03-2018 CI104_RS23460 0b33df07dcb3480221afabd89bc87a45 80 Pfam PF11106 Exopolysaccharide production protein YjbE 1 79 1.0E-28 T 28-03-2018 IPR025858 Exopolysaccharide production protein YjbE CI104_RS12980 e29a851a73cb1209d38a3ca46c001f19 453 Gene3D G3DSA:1.20.1250.20 2 208 4.7E-39 T 28-03-2018 CI104_RS12980 e29a851a73cb1209d38a3ca46c001f19 453 PIRSF PIRSF002808 1 441 2.2E-41 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS12980 e29a851a73cb1209d38a3ca46c001f19 453 Pfam PF07690 Major Facilitator Superfamily 14 390 4.4E-57 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS12980 e29a851a73cb1209d38a3ca46c001f19 453 SUPERFAMILY SSF103473 4 425 4.19E-79 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12980 e29a851a73cb1209d38a3ca46c001f19 453 Gene3D G3DSA:1.20.1250.20 217 450 8.5E-28 T 28-03-2018 CI104_RS07995 1238251cb6d4dbad1e5e41946df0ebae 333 Gene3D G3DSA:3.40.710.10 23 332 3.4E-111 T 28-03-2018 CI104_RS07995 1238251cb6d4dbad1e5e41946df0ebae 333 TIGRFAM TIGR03814 Gln_ase: glutaminase A 37 330 1.7E-105 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CI104_RS07995 1238251cb6d4dbad1e5e41946df0ebae 333 Pfam PF04960 Glutaminase 46 330 2.8E-104 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CI104_RS07995 1238251cb6d4dbad1e5e41946df0ebae 333 Hamap MF_00313 Glutaminase [glsA]. 28 330 40.138 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CI104_RS07995 1238251cb6d4dbad1e5e41946df0ebae 333 SUPERFAMILY SSF56601 28 330 3.17E-103 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS17880 62e84483b39e1d10df2b0c700b08557d 195 SUPERFAMILY SSF53474 7 191 9.29E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS17880 62e84483b39e1d10df2b0c700b08557d 195 Gene3D G3DSA:3.40.50.1820 2 193 2.1E-12 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS17880 62e84483b39e1d10df2b0c700b08557d 195 Pfam PF01738 Dienelactone hydrolase family 4 190 1.0E-18 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CI104_RS28110 36d32f0a410e04c7023c0d77fdeec32a 168 Pfam PF07275 Antirestriction protein (ArdA) 10 166 1.9E-36 T 28-03-2018 IPR009899 Antirestriction CI104_RS22435 f2cff4fe2ac808af3ae0266797dd3907 91 Gene3D G3DSA:3.30.1660.10 20 91 1.0E-21 T 28-03-2018 IPR025543 Dodecin-like CI104_RS22435 f2cff4fe2ac808af3ae0266797dd3907 91 SUPERFAMILY SSF159871 2 91 1.83E-23 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS22435 f2cff4fe2ac808af3ae0266797dd3907 91 Pfam PF07338 Protein of unknown function (DUF1471) 36 91 1.4E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS04935 b94e67bf3615a61b79053dd759012be2 168 PIRSF PIRSF004572 1 168 1.2E-79 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CI104_RS04935 b94e67bf3615a61b79053dd759012be2 168 Hamap MF_01332 Secretion monitor [secM]. 1 168 39.97 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CI104_RS04935 b94e67bf3615a61b79053dd759012be2 168 ProDom PD089227 MONITOR PERIPLASMIC SECRETION PRECURSOR SIGNAL YACA 1 168 1.0E-64 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CI104_RS04935 b94e67bf3615a61b79053dd759012be2 168 Pfam PF06558 Secretion monitor precursor protein (SecM) 24 165 2.3E-53 T 28-03-2018 IPR009502 Secretion monitor GO:0045182 CI104_RS00585 e30180147e1134d2686b42e66b524e93 284 ProDom PD024016 LIPOPOLYSACCHARIDE BIOSYNTHESIS CORE RFAZ WAAZ 1 259 1.0E-95 T 28-03-2018 CI104_RS00585 e30180147e1134d2686b42e66b524e93 284 TIGRFAM TIGR04437 WaaZ_KDO_III: 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ 6 256 3.8E-128 T 28-03-2018 IPR031026 3-deoxy-D-manno-oct-2-ulosonate III transferase WaaZ CI104_RS00585 e30180147e1134d2686b42e66b524e93 284 Gene3D G3DSA:3.90.1480.10 6 281 8.0E-35 T 28-03-2018 CI104_RS01165 9f0606c1ba886701a6e603a0f6acf509 680 Gene3D G3DSA:1.20.1050.40 4 138 3.4E-38 T 28-03-2018 IPR024080 Neurolysin/Thimet oligopeptidase, N-terminal CI104_RS01165 9f0606c1ba886701a6e603a0f6acf509 680 Gene3D G3DSA:1.10.1370.10 457 680 7.9E-70 T 28-03-2018 CI104_RS01165 9f0606c1ba886701a6e603a0f6acf509 680 Gene3D G3DSA:1.10.1370.10 140 443 4.0E-59 T 28-03-2018 CI104_RS01165 9f0606c1ba886701a6e603a0f6acf509 680 SUPERFAMILY SSF55486 1 677 1.71E-213 T 28-03-2018 CI104_RS01165 9f0606c1ba886701a6e603a0f6acf509 680 Pfam PF01432 Peptidase family M3 222 677 3.2E-175 T 28-03-2018 IPR001567 Peptidase M3A/M3B catalytic domain GO:0004222|GO:0006508 CI104_RS09170 9b83afaceceda9328ad1d582b31e5ac9 263 SUPERFAMILY SSF161098 56 237 5.63E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS09170 9b83afaceceda9328ad1d582b31e5ac9 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 9.5E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS09170 9b83afaceceda9328ad1d582b31e5ac9 263 Gene3D G3DSA:1.10.3720.10 8 254 5.0E-30 T 28-03-2018 CI104_RS12910 eda07aaca639e9a92c8cdc1908aa3eff 308 Gene3D G3DSA:3.40.710.10 3 308 4.9E-122 T 28-03-2018 CI104_RS12910 eda07aaca639e9a92c8cdc1908aa3eff 308 SUPERFAMILY SSF56601 8 308 6.8E-113 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS12910 eda07aaca639e9a92c8cdc1908aa3eff 308 TIGRFAM TIGR03814 Gln_ase: glutaminase A 10 308 4.8E-129 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CI104_RS12910 eda07aaca639e9a92c8cdc1908aa3eff 308 Pfam PF04960 Glutaminase 24 308 2.9E-111 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CI104_RS12910 eda07aaca639e9a92c8cdc1908aa3eff 308 Hamap MF_00313 Glutaminase [glsA]. 6 308 46.344 T 28-03-2018 IPR015868 Glutaminase GO:0004359|GO:0006541 KEGG: 00220+3.5.1.2|KEGG: 00250+3.5.1.2|KEGG: 00471+3.5.1.2|Reactome: R-HSA-210500|Reactome: R-HSA-5628897|Reactome: R-HSA-70614 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 Pfam PF05191 Adenylate kinase, active site lid 123 158 2.5E-16 T 28-03-2018 IPR007862 Adenylate kinase, active site lid domain GO:0004017 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 ProSitePatterns PS00113 Adenylate kinase signature. 81 92 - T 28-03-2018 IPR033690 Adenylate kinase, conserved site KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 PRINTS PR00094 Adenylate kinase signature 81 97 6.0E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 PRINTS PR00094 Adenylate kinase signature 4 17 6.0E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 PRINTS PR00094 Adenylate kinase signature 173 187 6.0E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 PRINTS PR00094 Adenylate kinase signature 32 46 6.0E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 PRINTS PR00094 Adenylate kinase signature 156 171 6.0E-36 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 Hamap MF_00235 Adenylate kinase [adk]. 1 214 53.349 T 28-03-2018 IPR000850 Adenylate kinase/UMP-CMP kinase GO:0005524|GO:0006139|GO:0019205 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219|Reactome: R-HSA-499943 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 Gene3D G3DSA:3.40.50.300 1 214 1.1E-67 T 28-03-2018 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 Pfam PF00406 Adenylate kinase 5 186 3.0E-60 T 28-03-2018 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 TIGRFAM TIGR01351 adk: adenylate kinase 2 213 3.6E-76 T 28-03-2018 IPR006259 Adenylate kinase subfamily GO:0004017|GO:0005524|GO:0016776 KEGG: 00230+2.7.4.3|KEGG: 00730+2.7.4.3|MetaCyc: PWY-7219 CI104_RS06645 4166927830d6f7b161bc79d03152f10c 214 SUPERFAMILY SSF52540 1 188 2.51E-45 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20965 3564820f9f8493b7c32ea28a31ba29a5 466 Pfam PF00860 Permease family 22 415 8.2E-109 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS20965 3564820f9f8493b7c32ea28a31ba29a5 466 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 363 383 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS20965 3564820f9f8493b7c32ea28a31ba29a5 466 TIGRFAM TIGR03173 pbuX: xanthine permease 28 447 7.5E-127 T 28-03-2018 IPR017588 Uric acid permease UacT-like GO:0006810|GO:0016021 CI104_RS20965 3564820f9f8493b7c32ea28a31ba29a5 466 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 18 445 1.6E-137 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS21735 2651d9068aa4ab3cef98865a9ea25c0f 121 Gene3D G3DSA:3.30.450.20 26 118 6.4E-49 T 28-03-2018 CI104_RS21735 2651d9068aa4ab3cef98865a9ea25c0f 121 Pfam PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A 17 117 5.4E-51 T 28-03-2018 IPR009320 Antitoxin CbeA GO:0051495 CI104_RS21735 2651d9068aa4ab3cef98865a9ea25c0f 121 SUPERFAMILY SSF143737 6 118 1.05E-53 T 28-03-2018 CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 SUPERFAMILY SSF117143 93 222 1.24E-34 T 28-03-2018 CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 Pfam PF00460 Flagella basal body rod protein 5 35 8.8E-14 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 145 243 2.4E-29 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 TIGRFAM TIGR03506 FlgEFG_subfam: flagellar hook-basal body protein 4 136 8.2E-49 T 28-03-2018 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 11 31 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 TIGRFAM TIGR02488 flgG_G_neg: flagellar basal-body rod protein FlgG 4 259 1.4E-117 T 28-03-2018 IPR012834 Flagellar basal-body rod FlgG GO:0009426|GO:0071973 CI104_RS10450 d9ff8cd09877a3b782fcc8113c18ad73 260 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 183 260 1.2E-26 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 53 728 6.4E-81 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 Gene3D G3DSA:2.170.130.10 43 179 3.9E-36 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 Gene3D G3DSA:2.40.170.20 180 728 1.5E-82 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 711 728 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 Pfam PF07715 TonB-dependent Receptor Plug Domain 52 166 1.7E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 SUPERFAMILY SSF56935 33 728 5.8E-135 T 28-03-2018 CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 42 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS14220 e57010ae5c92502130cbb3eae86267bc 728 Pfam PF00593 TonB dependent receptor 257 726 1.6E-55 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS21640 3c0dcfc5f9ab4b1d3ecb2f41b39f301e 305 Pfam PF00682 HMGL-like 5 277 1.1E-45 T 28-03-2018 IPR000891 Pyruvate carboxyltransferase GO:0003824 CI104_RS21640 3c0dcfc5f9ab4b1d3ecb2f41b39f301e 305 Gene3D G3DSA:3.20.20.70 1 292 5.8E-80 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS21640 3c0dcfc5f9ab4b1d3ecb2f41b39f301e 305 SUPERFAMILY SSF51569 2 279 2.2E-63 T 28-03-2018 CI104_RS03835 87f25f09170207807a2c1f02c1035f20 210 ProSitePatterns PS00893 Nudix box signature. 97 118 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS03835 87f25f09170207807a2c1f02c1035f20 210 TIGRFAM TIGR00052 TIGR00052: nudix-type nucleoside diphosphatase, YffH/AdpP family 14 199 8.8E-83 T 28-03-2018 IPR004385 Nucleoside diphosphate pyrophosphatase GO:0016818|GO:0046872 Reactome: R-HSA-480985 CI104_RS03835 87f25f09170207807a2c1f02c1035f20 210 Pfam PF00293 NUDIX domain 59 179 2.9E-13 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS03835 87f25f09170207807a2c1f02c1035f20 210 SUPERFAMILY SSF55811 5 208 5.55E-52 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS03835 87f25f09170207807a2c1f02c1035f20 210 Gene3D G3DSA:3.90.79.10 1 209 2.5E-46 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 Pfam PF00361 Proton-conducting membrane transporter 133 425 1.5E-98 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 58 82 6.4E-11 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 84 104 6.4E-11 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 417 439 6.4E-11 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01435 NADH-plastoquinone oxidoreductase chain 5 signature 265 287 6.4E-11 T 28-03-2018 IPR018393 NADH-plastoquinone oxidoreductase, chain 5 subgroup GO:0008137|GO:0042773|GO:0055114 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 Pfam PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus 64 121 7.1E-23 T 28-03-2018 IPR001516 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminal Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 TIGRFAM TIGR01974 NDH_I_L: proton-translocating NADH-quinone oxidoreductase, chain L 2 610 6.3E-238 T 28-03-2018 IPR003945 NADH-plastoquinone oxidoreductase, chain 5 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 247 273 9.5E-55 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 110 130 9.5E-55 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 157 178 9.5E-55 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 225 246 9.5E-55 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 418 437 9.5E-55 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 82 107 9.5E-55 T 28-03-2018 CI104_RS17500 69f1f3981ac76dbdf602a4baece792d5 613 PRINTS PR01434 NADH-ubiquinone oxidoreductase chain 5 signature 315 327 9.5E-55 T 28-03-2018 CI104_RS02110 3ffe3b0ab46d35559826dede0770529b 101 Pfam PF00253 Ribosomal protein S14p/S29e 47 100 3.0E-26 T 28-03-2018 IPR001209 Ribosomal protein S14 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS02110 3ffe3b0ab46d35559826dede0770529b 101 ProSitePatterns PS00527 Ribosomal protein S14 signature. 63 85 - T 28-03-2018 IPR018271 Ribosomal protein S14, conserved site GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02110 3ffe3b0ab46d35559826dede0770529b 101 Gene3D G3DSA:4.10.830.10 1 101 5.4E-33 T 28-03-2018 CI104_RS02110 3ffe3b0ab46d35559826dede0770529b 101 Hamap MF_00537 30S ribosomal protein S14 [rpsN]. 1 101 25.942 T 28-03-2018 IPR023036 Ribosomal protein S14, bacterial/plastid CI104_RS02110 3ffe3b0ab46d35559826dede0770529b 101 SUPERFAMILY SSF57716 2 101 1.5E-37 T 28-03-2018 CI104_RS00370 79e139605c50fe2fd6c0a828dd22b5b1 163 Gene3D G3DSA:3.40.630.30 1 163 7.3E-27 T 28-03-2018 CI104_RS00370 79e139605c50fe2fd6c0a828dd22b5b1 163 Pfam PF00583 Acetyltransferase (GNAT) family 16 141 7.2E-13 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS00370 79e139605c50fe2fd6c0a828dd22b5b1 163 SUPERFAMILY SSF55729 1 161 7.98E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS14775 12300d9079865c3fc5e9a4bef94a23c0 363 Gene3D G3DSA:2.30.300.10 230 355 1.3E-22 T 28-03-2018 CI104_RS14775 12300d9079865c3fc5e9a4bef94a23c0 363 Gene3D G3DSA:2.30.300.10 1 183 4.8E-53 T 28-03-2018 CI104_RS14775 12300d9079865c3fc5e9a4bef94a23c0 363 Pfam PF05954 Phage late control gene D protein (GPD) 30 323 5.2E-15 T 28-03-2018 CI104_RS14775 12300d9079865c3fc5e9a4bef94a23c0 363 SUPERFAMILY SSF69279 175 339 1.53E-38 T 28-03-2018 CI104_RS14775 12300d9079865c3fc5e9a4bef94a23c0 363 PIRSF PIRSF004440 1 361 3.8E-94 T 28-03-2018 IPR026276 Baseplate protein GpP CI104_RS14775 12300d9079865c3fc5e9a4bef94a23c0 363 SUPERFAMILY SSF69279 3 173 5.67E-53 T 28-03-2018 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 Pfam PF00248 Aldo/keto reductase family 17 271 4.8E-57 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 PIRSF PIRSF000097 115 281 8.9E-26 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 PIRSF PIRSF000097 1 124 1.8E-16 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 PRINTS PR00069 Aldo-keto reductase signature 127 144 3.3E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 PRINTS PR00069 Aldo-keto reductase signature 206 230 3.3E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 PRINTS PR00069 Aldo-keto reductase signature 97 115 3.3E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 PRINTS PR00069 Aldo-keto reductase signature 41 65 3.3E-19 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 Gene3D G3DSA:3.20.20.100 2 284 1.9E-82 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS11615 4bfb10a1126c92b7403f3cb60b83bb2c 284 SUPERFAMILY SSF51430 11 273 9.17E-79 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS13880 5f93d6bfff71478f4292229568dd576d 353 TIGRFAM TIGR01620 hyp_HI0043: TIGR01620 family protein 54 341 9.3E-149 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 CI104_RS13880 5f93d6bfff71478f4292229568dd576d 353 Hamap MF_01085 UPF0283 membrane protein YcjF [ycjF]. 4 347 39.264 T 28-03-2018 IPR006507 Uncharacterised protein family UPF0283 CI104_RS13880 5f93d6bfff71478f4292229568dd576d 353 Pfam PF05128 Domain of unknown function (DUF697) 183 341 5.0E-54 T 28-03-2018 IPR021147 Protein of unknown function DUF697 CI104_RS17970 4091f93d25e3fc5c0b522c1ee56c840a 179 Pfam PF09831 Uncharacterized protein conserved in bacteria (DUF2058) 5 179 8.8E-59 T 28-03-2018 IPR018636 Protein of unknown function DUF2058 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 Pfam PF13437 HlyD family secretion protein 262 388 1.4E-17 T 28-03-2018 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 Gene3D G3DSA:1.20.1600.10 103 359 4.0E-13 T 28-03-2018 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 78 98 4.4E-17 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 274 295 4.4E-17 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 385 400 4.4E-17 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 307 331 4.4E-17 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 SUPERFAMILY SSF111369 66 143 1.09E-5 T 28-03-2018 CI104_RS27460 21f91cba137bac048a1ee65d5ac54d9c 417 Gene3D G3DSA:2.40.50.100 43 99 0.0061 T 28-03-2018 CI104_RS16995 3d3c677f10c14061ebd091371f97ddfb 328 Gene3D G3DSA:3.40.50.300 1 195 2.5E-29 T 28-03-2018 CI104_RS16995 3d3c677f10c14061ebd091371f97ddfb 328 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 5 178 2.4E-39 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CI104_RS16995 3d3c677f10c14061ebd091371f97ddfb 328 SUPERFAMILY SSF52540 6 169 9.88E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16995 3d3c677f10c14061ebd091371f97ddfb 328 Pfam PF07683 Cobalamin synthesis protein cobW C-terminal domain 242 321 3.3E-5 T 28-03-2018 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 SUPERFAMILY SSF46785 1247 1311 5.17E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 SMART SM00843 1247 1312 3.6E-42 T 28-03-2018 IPR018541 FtsK gamma domain CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 Pfam PF13491 4TM region of DNA translocase FtsK/SpoIIIE 20 191 4.9E-41 T 28-03-2018 IPR025199 DNA translocase FtsK, 4TM region CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 SUPERFAMILY SSF52540 907 1219 4.78E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 Gene3D G3DSA:1.10.3720.10 22 243 4.8E-4 T 28-03-2018 CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 Gene3D G3DSA:1.10.10.10 1249 1303 5.3E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 Gene3D G3DSA:3.40.50.300 646 1185 4.4E-55 T 28-03-2018 CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 Pfam PF01580 FtsK/SpoIIIE family 933 1146 2.7E-75 T 28-03-2018 IPR002543 FtsK domain GO:0000166|GO:0003677|GO:0005524 CI104_RS08920 54b08a3821d5a47932177b544eb44d1c 1314 Pfam PF09397 Ftsk gamma domain 1249 1309 3.9E-28 T 28-03-2018 IPR018541 FtsK gamma domain CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 SUPERFAMILY SSF46689 57 106 1.39E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 Gene3D G3DSA:1.10.10.60 1 57 8.1E-17 T 28-03-2018 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 Pfam PF12833 Helix-turn-helix domain 27 106 1.4E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 Gene3D G3DSA:1.10.10.60 58 107 3.5E-14 T 28-03-2018 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 SUPERFAMILY SSF46689 4 56 1.5E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 SMART SM00342 21 104 8.4E-33 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 58 100 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 2.4E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS23285 609c4a3ec9321fb9195e5d1d1f75692b 107 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 2.4E-7 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS13005 ec0cee2014d28d9b6bfd9a0f47fe9378 439 TIGRFAM TIGR03071 couple_hipA: HipA N-terminal domain 4 103 9.6E-30 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CI104_RS13005 ec0cee2014d28d9b6bfd9a0f47fe9378 439 Pfam PF07804 HipA-like C-terminal domain 149 402 1.2E-52 T 28-03-2018 IPR012893 HipA-like, C-terminal CI104_RS13005 ec0cee2014d28d9b6bfd9a0f47fe9378 439 Pfam PF13657 HipA N-terminal domain 7 103 6.5E-24 T 28-03-2018 IPR017508 HipA, N-terminal subdomain 1 CI104_RS12080 1bcfa1c6e680fa42ee6e888bf70f9cc6 118 Gene3D G3DSA:1.10.3100.10 1 118 5.1E-14 T 28-03-2018 IPR027910 YdiL-like domain CI104_RS12080 1bcfa1c6e680fa42ee6e888bf70f9cc6 118 SUPERFAMILY SSF47413 1 118 1.72E-42 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS12080 1bcfa1c6e680fa42ee6e888bf70f9cc6 118 Pfam PF08965 Domain of unknown function (DUF1870) 1 118 7.1E-49 T 28-03-2018 IPR015060 Protein of unknown function DUF1870 CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 Pfam PF03466 LysR substrate binding domain 98 289 4.2E-18 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 Gene3D G3DSA:3.40.190.10 94 183 2.9E-6 T 28-03-2018 CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 SUPERFAMILY SSF46785 8 91 1.69E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 9 68 5.0E-16 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 Gene3D G3DSA:1.10.10.10 2 89 1.5E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 SUPERFAMILY SSF53850 93 290 1.36E-22 T 28-03-2018 CI104_RS03195 66300da999547f33e6a2a896a6e58266 298 Gene3D G3DSA:3.40.190.10 184 268 1.1E-10 T 28-03-2018 CI104_RS01465 8f0f7b48331d5cb36d8497882b579c3e 237 Pfam PF00005 ABC transporter 21 165 7.6E-33 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS01465 8f0f7b48331d5cb36d8497882b579c3e 237 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01465 8f0f7b48331d5cb36d8497882b579c3e 237 SMART SM00382 30 216 8.4E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01465 8f0f7b48331d5cb36d8497882b579c3e 237 PIRSF PIRSF039137 1 237 2.1E-103 T 28-03-2018 IPR030660 High-affinity branched-chain amino acid transport ATP-binding protein GO:0015658|GO:0015803 CI104_RS01465 8f0f7b48331d5cb36d8497882b579c3e 237 Gene3D G3DSA:3.40.50.300 1 237 2.6E-59 T 28-03-2018 CI104_RS01465 8f0f7b48331d5cb36d8497882b579c3e 237 SUPERFAMILY SSF52540 4 234 3.84E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19565 f9b4e540b2537cdd77e299c18230dd54 81 SUPERFAMILY SSF52833 1 74 3.16E-20 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS19565 f9b4e540b2537cdd77e299c18230dd54 81 Pfam PF00462 Glutaredoxin 3 58 2.3E-12 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CI104_RS19565 f9b4e540b2537cdd77e299c18230dd54 81 TIGRFAM TIGR02194 GlrX_NrdH: glutaredoxin-like protein NrdH 3 73 2.5E-34 T 28-03-2018 IPR011909 Glutaredoxin-like protein NrdH GO:0045454 CI104_RS19565 f9b4e540b2537cdd77e299c18230dd54 81 Gene3D G3DSA:3.40.30.10 1 77 2.4E-12 T 28-03-2018 CI104_RS10370 6b876188e2812d9efdae358bfcdb3388 186 Pfam PF07273 Protein of unknown function (DUF1439) 27 178 9.1E-55 T 28-03-2018 IPR010835 Protein of unknown function DUF1439 CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 Gene3D G3DSA:3.40.50.720 1 259 3.7E-53 T 28-03-2018 CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 Pfam PF00106 short chain dehydrogenase 3 197 1.8E-48 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 141 169 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 SUPERFAMILY SSF51735 2 258 3.13E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 134 142 3.6E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 80 91 3.6E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 154 173 3.6E-9 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 80 91 2.5E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 4 21 2.5E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 128 144 2.5E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 154 173 2.5E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS19730 e3e3c783c567e29a449f192c0663a6ca 259 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 220 240 2.5E-19 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS08610 fbb746aa6c28dbcdcea813484afb0daa 364 Gene3D G3DSA:3.20.20.80 19 338 1.4E-30 T 28-03-2018 CI104_RS08610 fbb746aa6c28dbcdcea813484afb0daa 364 Pfam PF00150 Cellulase (glycosyl hydrolase family 5) 55 291 4.0E-6 T 28-03-2018 IPR001547 Glycoside hydrolase, family 5 GO:0004553|GO:0005975 CI104_RS08610 fbb746aa6c28dbcdcea813484afb0daa 364 SUPERFAMILY SSF51445 19 341 1.58E-42 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS11020 1b8d97fa275666228b257dbc67a85a36 78 Gene3D G3DSA:1.10.1660.20 5 76 1.6E-22 T 28-03-2018 CI104_RS11020 1b8d97fa275666228b257dbc67a85a36 78 SUPERFAMILY SSF46955 4 78 3.11E-20 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS11020 1b8d97fa275666228b257dbc67a85a36 78 Pfam PF07825 Excisionase-like protein 7 74 1.9E-6 T 28-03-2018 IPR012884 Excisionase-like GO:0003677|GO:0006310 CI104_RS24775 8fbce3d5a0a3c6ab09f7a1d571c22b8f 297 TIGRFAM TIGR00688 rarD: protein RarD 9 261 4.2E-112 T 28-03-2018 IPR004626 RarD protein GO:0005215|GO:0005887|GO:0006810 CI104_RS24775 8fbce3d5a0a3c6ab09f7a1d571c22b8f 297 SUPERFAMILY SSF103481 189 284 9.81E-6 T 28-03-2018 CI104_RS24775 8fbce3d5a0a3c6ab09f7a1d571c22b8f 297 SUPERFAMILY SSF103481 42 145 1.31E-13 T 28-03-2018 CI104_RS24775 8fbce3d5a0a3c6ab09f7a1d571c22b8f 297 Pfam PF00892 EamA-like transporter family 8 142 1.1E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS07840 01de8990d91552853de73fd1d41c35fa 310 Pfam PF02626 Carboxyltransferase domain, subdomain A and B 25 281 1.8E-91 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CI104_RS07840 01de8990d91552853de73fd1d41c35fa 310 SUPERFAMILY SSF50891 173 288 2.12E-12 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS07840 01de8990d91552853de73fd1d41c35fa 310 SMART SM00797 23 298 4.5E-144 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CI104_RS07840 01de8990d91552853de73fd1d41c35fa 310 TIGRFAM TIGR00724 urea_amlyse_rel: biotin-dependent carboxylase uncharacterized domain 1 309 1.1E-133 T 28-03-2018 IPR003778 Carboxyltransferase domain, subdomain A and B CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Pfam PF09317 Domain of unknown function (DUF1974) 514 792 5.2E-119 T 28-03-2018 IPR015396 Acyl-CoA dehydrogenase, C-termina, bacterial type GO:0003995|GO:0033539|GO:0055114 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Gene3D G3DSA:2.40.110.10 236 352 6.0E-17 T 28-03-2018 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 SUPERFAMILY SSF56645 117 355 1.7E-46 T 28-03-2018 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain GO:0008152|GO:0016627|GO:0055114 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Gene3D G3DSA:1.20.140.10 353 508 3.2E-19 T 28-03-2018 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Pfam PF02771 Acyl-CoA dehydrogenase, N-terminal domain 147 232 2.3E-15 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Pfam PF02770 Acyl-CoA dehydrogenase, middle domain 237 328 4.6E-9 T 28-03-2018 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain GO:0016627|GO:0055114 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 SUPERFAMILY SSF47203 360 515 4.83E-21 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Pfam PF00441 Acyl-CoA dehydrogenase, C-terminal domain 360 504 4.4E-12 T 28-03-2018 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal GO:0016627|GO:0055114 CI104_RS05710 c63719fac378f889c299b9d44f141ee6 814 Gene3D G3DSA:1.10.540.10 76 235 6.8E-30 T 28-03-2018 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal GO:0016627|GO:0050660|GO:0055114 CI104_RS08645 2836c4553bb9dcdd2a1608ffa01e914a 402 Gene3D G3DSA:1.20.1250.20 207 394 9.5E-26 T 28-03-2018 CI104_RS08645 2836c4553bb9dcdd2a1608ffa01e914a 402 SUPERFAMILY SSF103473 12 390 4.05E-46 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS08645 2836c4553bb9dcdd2a1608ffa01e914a 402 Gene3D G3DSA:1.20.1250.20 4 206 5.7E-15 T 28-03-2018 CI104_RS08645 2836c4553bb9dcdd2a1608ffa01e914a 402 Pfam PF07690 Major Facilitator Superfamily 223 396 2.0E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 41 65 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 PRINTS PR00990 Ribokinase signature 224 235 4.3E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 PRINTS PR00990 Ribokinase signature 185 200 4.3E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 PRINTS PR00990 Ribokinase signature 36 55 4.3E-6 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 254 267 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 Pfam PF00294 pfkB family carbohydrate kinase 5 300 9.1E-67 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 Gene3D G3DSA:3.40.1190.20 1 315 2.4E-62 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS11670 08175aa55108e561232f30e4964d4f9b 315 SUPERFAMILY SSF53613 1 300 2.18E-67 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS05810 d01d4044ef0bdb27d889859dbc6abfff 85 Gene3D G3DSA:3.40.50.1580 1 80 2.1E-10 T 28-03-2018 CI104_RS05810 d01d4044ef0bdb27d889859dbc6abfff 85 Pfam PF01048 Phosphorylase superfamily 2 79 1.7E-9 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS05810 d01d4044ef0bdb27d889859dbc6abfff 85 SUPERFAMILY SSF53167 3 79 1.24E-14 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 Gene3D G3DSA:3.40.50.720 52 260 5.6E-61 T 28-03-2018 CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 Gene3D G3DSA:3.40.50.720 8 51 5.0E-10 T 28-03-2018 CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 167 186 5.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 92 103 5.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 145 153 5.7E-11 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 154 182 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 22 258 4.2E-68 T 28-03-2018 CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 188 205 3.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 222 242 3.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 167 186 3.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 17 34 3.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 139 155 3.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 92 103 3.4E-42 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07220 fa79371795302db41cd09ecd54aa2831 261 SUPERFAMILY SSF51735 14 259 1.88E-80 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01040 eeefc7142e7ab8d6e44d880feee21d5a 62 Pfam PF10945 Cellulose biosynthesis protein BcsR 18 59 4.2E-23 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CI104_RS01040 eeefc7142e7ab8d6e44d880feee21d5a 62 ProDom PD053230 YHJR ECS4415 STY4179 CYTOPLASMIC 1 60 2.0E-25 T 28-03-2018 IPR024487 Cellulose biosynthesis protein BcsR CI104_RS05350 af99ebb52acdc54d5ab019262501cbf3 151 Gene3D G3DSA:3.10.129.10 1 149 9.5E-56 T 28-03-2018 CI104_RS05350 af99ebb52acdc54d5ab019262501cbf3 151 SUPERFAMILY SSF54637 7 146 9.39E-51 T 28-03-2018 IPR029069 HotDog domain CI104_RS05350 af99ebb52acdc54d5ab019262501cbf3 151 TIGRFAM TIGR01750 fabZ: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ 8 146 3.1E-60 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS05350 af99ebb52acdc54d5ab019262501cbf3 151 Pfam PF07977 FabA-like domain 17 141 1.9E-40 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS05350 af99ebb52acdc54d5ab019262501cbf3 151 Hamap MF_00406 3-hydroxyacyl-[acyl-carrier-protein] dehydratase FabZ [fabZ]. 8 149 37.504 T 28-03-2018 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ GO:0005737|GO:0006633|GO:0016836 KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS25480 fd33d350555b2e203fe666e473ea58a9 410 Pfam PF13362 Toprim domain 276 396 1.0E-12 T 28-03-2018 IPR006171 TOPRIM domain CI104_RS25480 fd33d350555b2e203fe666e473ea58a9 410 Gene3D G3DSA:3.40.1360.10 266 401 1.5E-7 T 28-03-2018 CI104_RS20730 8ae4977b00e0a18249d0dea3175d7ae3 228 Pfam PF07670 Nucleoside recognition 86 188 4.1E-6 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CI104_RS22385 2efbb19ee5a66d7e26fa4c820d8b9c94 220 TIGRFAM TIGR03652 FeS_repair_RIC: iron-sulfur cluster repair di-iron protein 8 216 2.4E-80 T 28-03-2018 IPR019903 Repair of iron centres family CI104_RS22385 2efbb19ee5a66d7e26fa4c820d8b9c94 220 Gene3D G3DSA:1.20.120.520 61 218 9.0E-32 T 28-03-2018 CI104_RS22385 2efbb19ee5a66d7e26fa4c820d8b9c94 220 Hamap MF_01606 Iron-sulfur cluster repair protein YtfE [ytfE]. 1 220 52.301 T 28-03-2018 IPR023742 Iron-sulfur cluster repair protein YftE GO:0006950|GO:0030091 CI104_RS22385 2efbb19ee5a66d7e26fa4c820d8b9c94 220 Pfam PF04405 Domain of Unknown function (DUF542) 5 58 1.9E-20 T 28-03-2018 IPR019903 Repair of iron centres family CI104_RS22385 2efbb19ee5a66d7e26fa4c820d8b9c94 220 Gene3D G3DSA:1.10.3910.10 3 60 1.4E-12 T 28-03-2018 CI104_RS22385 2efbb19ee5a66d7e26fa4c820d8b9c94 220 Pfam PF01814 Hemerythrin HHE cation binding domain 77 216 3.7E-26 T 28-03-2018 IPR012312 Haemerythrin-like Reactome: R-HSA-390471|Reactome: R-HSA-8951664|Reactome: R-HSA-917937|Reactome: R-HSA-983168 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 SUPERFAMILY SSF82861 28 112 1.83E-17 T 28-03-2018 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 GO:0016020 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 ProSitePatterns PS01246 Uncharacterized protein family UPF0003 signature. 143 177 - T 28-03-2018 IPR006686 Mechanosensitive ion channel MscS, conserved site GO:0016020 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 Gene3D G3DSA:3.30.70.100 180 273 5.3E-30 T 28-03-2018 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 Pfam PF00924 Mechanosensitive ion channel 72 268 4.6E-59 T 28-03-2018 IPR006685 Mechanosensitive ion channel MscS GO:0016020|GO:0055085 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 Gene3D G3DSA:2.30.30.60 129 179 2.7E-15 T 28-03-2018 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 SUPERFAMILY SSF82689 181 278 1.14E-32 T 28-03-2018 IPR011066 Mechanosensitive ion channel MscS, C-terminal GO:0016020 CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 Pfam PF05552 Conserved TM helix 16 64 2.3E-14 T 28-03-2018 IPR008910 Conserved TM helix CI104_RS04380 2888ca2348606a3adbfbcf6b218e537e 286 SUPERFAMILY SSF50182 114 179 4.9E-17 T 28-03-2018 IPR010920 LSM domain CI104_RS00450 5fd715912b232bc3949017117e8b3af2 229 Pfam PF00588 SpoU rRNA Methylase family 20 159 7.9E-37 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CI104_RS00450 5fd715912b232bc3949017117e8b3af2 229 SUPERFAMILY SSF75217 4 185 8.5E-50 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS00450 5fd715912b232bc3949017117e8b3af2 229 Pfam PF12105 SpoU, rRNA methylase, C-terminal 163 218 2.8E-24 T 28-03-2018 IPR022724 RNA methyltransferase, SpoU/TrmH type, C-terminal GO:0009020 CI104_RS00450 5fd715912b232bc3949017117e8b3af2 229 Hamap MF_02060 tRNA (guanosine(18)-2'-O)-methyltransferase [trmH]. 2 197 36.845 T 28-03-2018 IPR033671 tRNA (guanosine(18)-2'-O)-methyltransferase GO:0008168|GO:0030488 CI104_RS00450 5fd715912b232bc3949017117e8b3af2 229 Gene3D G3DSA:3.40.1280.10 1 190 6.8E-48 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 Gene3D G3DSA:3.40.50.300 313 542 2.8E-42 T 28-03-2018 CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 SMART SM00382 348 526 5.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 SUPERFAMILY SSF52540 314 529 6.73E-48 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 Gene3D G3DSA:1.20.1560.10 1 303 2.5E-20 T 28-03-2018 CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 Pfam PF00664 ABC transporter transmembrane region 47 192 1.6E-6 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 Pfam PF00005 ABC transporter 341 477 2.6E-27 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 TIGRFAM TIGR01194 cyc_pep_trnsptr: cyclic peptide transporter 2 527 3.8E-112 T 28-03-2018 IPR005898 Cyclic peptide transporter GO:0005524|GO:0015197|GO:0015833|GO:0016021 CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 ProSitePatterns PS00211 ABC transporters family signature. 450 464 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS17205 a2f8bfd7c2c5d85ba9ba2fb41f455e30 547 SUPERFAMILY SSF90123 5 299 1.03E-24 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS02755 fca8a1955ffd66d59c4678b998c6d2ee 97 Gene3D G3DSA:3.30.300.90 10 96 2.6E-26 T 28-03-2018 CI104_RS02755 fca8a1955ffd66d59c4678b998c6d2ee 97 SUPERFAMILY SSF82657 13 95 5.1E-29 T 28-03-2018 IPR002634 BolA protein CI104_RS02755 fca8a1955ffd66d59c4678b998c6d2ee 97 PIRSF PIRSF003113 4 96 6.2E-23 T 28-03-2018 IPR002634 BolA protein CI104_RS02755 fca8a1955ffd66d59c4678b998c6d2ee 97 Pfam PF01722 BolA-like protein 30 87 8.3E-15 T 28-03-2018 IPR002634 BolA protein CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 ProSitePatterns PS00836 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 1. 4 30 - T 28-03-2018 IPR008142 Alanine dehydrogenase/NAD(P) transhydrogenase, conserved site-1 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 SUPERFAMILY SSF52283 1 168 4.34E-57 T 28-03-2018 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 PIRSF PIRSF000203 1 508 3.6E-284 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 SUPERFAMILY SSF51735 137 317 5.01E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 SMART SM01002 146 311 5.4E-84 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 Gene3D G3DSA:3.40.50.720 196 377 9.0E-57 T 28-03-2018 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 TIGRFAM TIGR00561 pntA: NAD(P)(+) transhydrogenase (AB-specific), alpha subunit 2 509 0.0 T 28-03-2018 IPR026255 NAD(P) transhydrogenase, alpha subunit GO:0008746|GO:0015992|GO:0055114 KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 ProSitePatterns PS00837 Alanine dehydrogenase & pyridine nucleotide transhydrogenase signature 2. 170 195 - T 28-03-2018 IPR008143 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, conserved site-2 GO:0016491|GO:0055114 Reactome: R-HSA-71403 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 Pfam PF01262 Alanine dehydrogenase/PNT, C-terminal domain 141 368 1.5E-75 T 28-03-2018 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 Gene3D G3DSA:3.40.50.720 1 195 4.7E-52 T 28-03-2018 CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 Pfam PF05222 Alanine dehydrogenase/PNT, N-terminal domain 4 137 2.0E-51 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 SMART SM01003 4 137 7.0E-76 T 28-03-2018 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CI104_RS12620 24331983927832e4126e7ba57c5250f1 509 Pfam PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch 426 508 9.0E-36 T 28-03-2018 IPR024605 NAD(P) transhydrogenase, alpha subunit, C-terminal KEGG: 00760+1.6.1.2|Reactome: R-HSA-71403 CI104_RS06350 88e4abbeecfd1d1b0929f7e90cd6f878 163 SUPERFAMILY SSF89963 2 89 1.1E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CI104_RS06350 88e4abbeecfd1d1b0929f7e90cd6f878 163 SUPERFAMILY SSF89963 91 163 4.71E-29 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CI104_RS06350 88e4abbeecfd1d1b0929f7e90cd6f878 163 Pfam PF04461 Protein of unknown function (DUF520) 2 162 7.3E-64 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CI104_RS06350 88e4abbeecfd1d1b0929f7e90cd6f878 163 Gene3D G3DSA:3.30.70.990 10 97 6.0E-29 T 28-03-2018 IPR035570 UPF0234 N-terminal domain CI104_RS06350 88e4abbeecfd1d1b0929f7e90cd6f878 163 Hamap MF_00632 UPF0234 protein YajQ [yajQ]. 1 163 30.146 T 28-03-2018 IPR007551 Protein of unknown function DUF520 CI104_RS06350 88e4abbeecfd1d1b0929f7e90cd6f878 163 Gene3D G3DSA:3.30.70.860 98 162 8.6E-34 T 28-03-2018 IPR035571 UPF0234/UPF0381 domain CI104_RS07775 9e86bf56c18c1bc95868caf17bd98058 439 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 1 432 3.6E-152 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CI104_RS07775 9e86bf56c18c1bc95868caf17bd98058 439 TIGRFAM TIGR04299 antiport_PotE: putrescine-ornithine antiporter 4 433 2.0E-251 T 28-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CI104_RS07775 9e86bf56c18c1bc95868caf17bd98058 439 Hamap MF_02073 Putrescine transporter PotE [potE]. 9 436 36.32 T 28-03-2018 IPR027566 Putrescine transporter PotE GO:0015496|GO:0015822|GO:0015847 CI104_RS07775 9e86bf56c18c1bc95868caf17bd98058 439 PIRSF PIRSF006060 1 437 8.2E-51 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS07775 9e86bf56c18c1bc95868caf17bd98058 439 Pfam PF13520 Amino acid permease 10 410 4.3E-48 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS03970 4cb2a9f0cd7549f8e8f52caa327475ef 244 TIGRFAM TIGR02797 exbB: tonB-system energizer ExbB 11 222 6.1E-102 T 28-03-2018 IPR014164 TonB-system energizer ExbB type-1 GO:0006810|GO:0016020 CI104_RS03970 4cb2a9f0cd7549f8e8f52caa327475ef 244 Pfam PF01618 MotA/TolQ/ExbB proton channel family 84 206 5.7E-35 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 TIGRFAM TIGR00079 pept_deformyl: peptide deformylase 4 160 2.5E-66 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 Gene3D G3DSA:3.90.45.10 1 169 6.4E-62 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 PRINTS PR01576 Peptide deformylase signature 101 119 6.7E-39 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 PRINTS PR01576 Peptide deformylase signature 120 149 6.7E-39 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 PRINTS PR01576 Peptide deformylase signature 89 100 6.7E-39 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 PRINTS PR01576 Peptide deformylase signature 33 62 6.7E-39 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 Pfam PF01327 Polypeptide deformylase 4 152 3.9E-51 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 PIRSF PIRSF004749 1 168 2.6E-55 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 Hamap MF_00163 Peptide deformylase [def]. 2 162 32.062 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS02215 7544b8400aa1922223eca383f7a1816a 169 SUPERFAMILY SSF56420 3 164 1.02E-61 T 28-03-2018 IPR023635 Peptide deformylase CI104_RS07230 5bcdfc2b570966f244fce85f65efb307 355 Pfam PF02653 Branched-chain amino acid transport system / permease component 43 320 4.9E-43 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS07230 5bcdfc2b570966f244fce85f65efb307 355 Gene3D G3DSA:1.10.3470.10 25 325 2.2E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Pfam PF08461 Ribonuclease R winged-helix domain 23 85 6.2E-15 T 28-03-2018 IPR013668 Ribonuclease R winged-helix domain CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SMART SM00316 642 725 4.4E-17 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 TIGRFAM TIGR00358 3_prime_RNase: VacB and RNase II family 3'-5' exoribonucleases 67 725 6.0E-288 T 28-03-2018 IPR004476 Ribonuclease II/ribonuclease R GO:0003723|GO:0004540|GO:0016070 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SUPERFAMILY SSF50249 67 145 1.86E-16 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SUPERFAMILY SSF50249 138 235 3.83E-14 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Pfam PF00575 S1 RNA binding domain 641 724 7.7E-20 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Pfam PF08206 Ribonuclease B OB domain 87 144 4.3E-22 T 28-03-2018 IPR013223 Ribonuclease B, N-terminal OB domain CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Hamap MF_01895 Ribonuclease R [rnr]. 38 725 57.966 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SUPERFAMILY SSF50249 644 724 1.66E-22 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22500 3592889428dce93eb38f287f115960c0 817 ProSitePatterns PS01175 Ribonuclease II family signature. 555 579 - T 28-03-2018 IPR022966 Ribonuclease II/R, conserved site CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Gene3D G3DSA:1.10.10.10 18 79 3.4E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22500 3592889428dce93eb38f287f115960c0 817 TIGRFAM TIGR02063 RNase_R: ribonuclease R 19 725 1.4E-286 T 28-03-2018 IPR011805 Ribonuclease R GO:0003723|GO:0004518 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SUPERFAMILY SSF50249 222 641 4.8E-142 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Pfam PF00773 RNB domain 260 587 2.3E-110 T 28-03-2018 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SMART SM00955 260 588 6.3E-185 T 28-03-2018 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 Gene3D G3DSA:2.40.50.140 641 726 3.8E-21 T 28-03-2018 CI104_RS22500 3592889428dce93eb38f287f115960c0 817 SMART SM00357 86 145 2.1E-16 T 28-03-2018 IPR011129 Cold shock domain GO:0003676 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 394 413 2.2E-9 T 28-03-2018 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 70 92 2.2E-9 T 28-03-2018 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 132 156 2.2E-9 T 28-03-2018 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 PRINTS PR01036 Tetracycline resistance protein TetB signature 157 181 2.2E-9 T 28-03-2018 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 SUPERFAMILY SSF103473 465 487 1.83E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 SUPERFAMILY SSF103473 3 189 1.83E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 SUPERFAMILY SSF103473 242 413 1.83E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 Pfam PF07690 Major Facilitator Superfamily 12 403 1.2E-38 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 Gene3D G3DSA:1.20.1250.20 246 494 2.3E-22 T 28-03-2018 CI104_RS13170 e21229e2fc95b008379ceb2b056703d6 495 Gene3D G3DSA:1.20.1250.20 2 194 1.2E-25 T 28-03-2018 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 Gene3D G3DSA:1.20.58.340 249 316 1.3E-20 T 28-03-2018 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 SUPERFAMILY SSF144083 251 314 1.57E-20 T 28-03-2018 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 SUPERFAMILY SSF143865 1 255 4.45E-38 T 28-03-2018 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 TIGRFAM TIGR00383 corA: magnesium and cobalt transport protein CorA 3 316 7.8E-114 T 28-03-2018 IPR004488 Magnesium/cobalt transport protein CorA GO:0006824|GO:0015087|GO:0015095|GO:0015693|GO:0016020 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 Gene3D G3DSA:3.30.460.20 1 124 5.0E-10 T 28-03-2018 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 Pfam PF01544 CorA-like Mg2+ transporter protein 26 312 3.3E-56 T 28-03-2018 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB GO:0016020|GO:0030001|GO:0046873|GO:0055085 CI104_RS24780 a3ac43fa0a4b5bc6a77f86fbd70ff6e4 316 Gene3D G3DSA:1.20.58.340 131 248 2.4E-9 T 28-03-2018 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 Pfam PF02040 Arsenical pump membrane protein 3 423 9.0E-159 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 8.1E-121 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS26195 e0823cc8088b4b487320bc012180e936 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 2.6E-223 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Gene3D G3DSA:3.20.20.70 438 778 6.8E-83 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Pfam PF04898 Glutamate synthase central domain 457 737 1.2E-104 T 28-03-2018 IPR006982 Glutamate synthase, central-N GO:0006807|GO:0015930|GO:0055114 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Pfam PF01493 GXGXG motif 1236 1419 4.7E-74 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Pfam PF00310 Glutamine amidotransferases class-II 12 425 1.7E-175 T 28-03-2018 IPR017932 Glutamine amidotransferase type 2 domain CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 SUPERFAMILY SSF56235 12 429 4.55E-149 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Gene3D G3DSA:3.60.20.10 12 437 3.0E-143 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Gene3D G3DSA:3.20.20.70 779 1209 3.1E-146 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Gene3D G3DSA:2.160.20.60 1211 1485 2.4E-95 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 Pfam PF01645 Conserved region in glutamate synthase 793 1156 1.7E-158 T 28-03-2018 IPR002932 Glutamate synthase domain GO:0006537|GO:0015930|GO:0016638|GO:0055114 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 SUPERFAMILY SSF69336 1211 1465 1.7E-87 T 28-03-2018 IPR002489 Glutamate synthase, alpha subunit, C-terminal GO:0008152|GO:0016491|GO:0055114 CI104_RS02635 bdf0ed3a43baf35ea3afe54d4cfc2bb0 1486 SUPERFAMILY SSF51395 434 1191 4.49E-251 T 28-03-2018 CI104_RS02650 285095c101c5cd0b2fc613711f4e3a5c 309 TIGRFAM TIGR01212 TIGR01212: radical SAM protein, TIGR01212 family 6 301 2.7E-141 T 28-03-2018 IPR005911 Protein YhcC-like GO:0051536 CI104_RS02650 285095c101c5cd0b2fc613711f4e3a5c 309 Pfam PF04055 Radical SAM superfamily 43 201 5.9E-15 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS02650 285095c101c5cd0b2fc613711f4e3a5c 309 Pfam PF16199 Radical_SAM C-terminal domain 208 283 8.6E-18 T 28-03-2018 IPR032432 Radical SAM, C-terminal extension Reactome: R-HSA-3214847 CI104_RS02650 285095c101c5cd0b2fc613711f4e3a5c 309 SMART SM00729 23 247 1.2E-41 T 28-03-2018 IPR006638 Elongator protein 3/MiaB/NifB GO:0003824|GO:0051536 CI104_RS02650 285095c101c5cd0b2fc613711f4e3a5c 309 SUPERFAMILY SSF102114 13 260 2.75E-45 T 28-03-2018 CI104_RS02650 285095c101c5cd0b2fc613711f4e3a5c 309 Gene3D G3DSA:3.20.20.70 3 291 2.2E-34 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 SMART SM00387 332 440 3.2E-28 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 SMART SM00388 233 293 1.5E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 SUPERFAMILY SSF55874 292 440 3.93E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 SMART SM00304 180 232 6.2E-6 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 Gene3D G3DSA:3.30.565.10 294 449 2.9E-34 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 Pfam PF00672 HAMP domain 182 225 2.9E-7 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 400 418 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 385 395 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 PRINTS PR00344 Bacterial sensor protein C-terminal signature 367 381 1.8E-12 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 Pfam PF00512 His Kinase A (phospho-acceptor) domain 235 289 4.9E-10 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 337 438 7.9E-19 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 Gene3D G3DSA:1.10.287.130 223 289 2.5E-12 T 28-03-2018 CI104_RS01725 3fda2a96c8c9117336ab5b613097b78e 450 SUPERFAMILY SSF47384 217 291 1.02E-11 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS09340 ed678ea8268b33c3a02949487b2610e0 108 Pfam PF02082 Transcriptional regulator 3 78 1.3E-14 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CI104_RS09340 ed678ea8268b33c3a02949487b2610e0 108 SUPERFAMILY SSF46785 13 97 3.4E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09340 ed678ea8268b33c3a02949487b2610e0 108 Gene3D G3DSA:1.10.10.10 8 104 2.7E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20090 6ef64b8f980bdfd233fdb585d9261cfd 149 PRINTS PR00369 Flavodoxin signature 53 64 2.8E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20090 6ef64b8f980bdfd233fdb585d9261cfd 149 PRINTS PR00369 Flavodoxin signature 84 94 2.8E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20090 6ef64b8f980bdfd233fdb585d9261cfd 149 PRINTS PR00369 Flavodoxin signature 108 127 2.8E-6 T 28-03-2018 IPR001094 Flavodoxin-like GO:0010181|GO:0055114 CI104_RS20090 6ef64b8f980bdfd233fdb585d9261cfd 149 Gene3D G3DSA:3.40.50.360 1 148 3.6E-27 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS20090 6ef64b8f980bdfd233fdb585d9261cfd 149 SUPERFAMILY SSF52218 1 148 2.37E-38 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS20090 6ef64b8f980bdfd233fdb585d9261cfd 149 Pfam PF00258 Flavodoxin 6 139 4.0E-24 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 356 376 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 SUPERFAMILY SSF53067 4 250 1.13E-59 T 28-03-2018 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 4 249 1.1E-66 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 Gene3D G3DSA:3.30.420.40 1 242 1.8E-59 T 28-03-2018 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 260 443 6.3E-21 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 Gene3D G3DSA:3.30.420.40 243 492 3.9E-34 T 28-03-2018 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 SUPERFAMILY SSF53067 252 490 4.75E-41 T 28-03-2018 CI104_RS23915 a38b97ba1dee2800bcd9268ea2ffd226 494 PIRSF PIRSF000538 2 494 4.9E-85 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS24050 d3832bc0a284fba9150940ad86b0224e 126 Gene3D G3DSA:1.20.1290.10 7 125 3.0E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS24050 d3832bc0a284fba9150940ad86b0224e 126 Pfam PF02627 Carboxymuconolactone decarboxylase family 33 118 1.5E-23 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CI104_RS24050 d3832bc0a284fba9150940ad86b0224e 126 SUPERFAMILY SSF69118 2 122 5.76E-35 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS17655 344eb6b7233a2afd053c2c436509019c 120 SUPERFAMILY SSF55620 7 120 1.17E-29 T 28-03-2018 CI104_RS17655 344eb6b7233a2afd053c2c436509019c 120 TIGRFAM TIGR00526 folB_dom: FolB domain 7 120 1.6E-37 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS17655 344eb6b7233a2afd053c2c436509019c 120 Gene3D G3DSA:3.30.1130.10 1 120 8.2E-29 T 28-03-2018 CI104_RS17655 344eb6b7233a2afd053c2c436509019c 120 SMART SM00905 8 118 3.5E-31 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS17655 344eb6b7233a2afd053c2c436509019c 120 Pfam PF02152 Dihydroneopterin aldolase 8 116 1.4E-23 T 28-03-2018 IPR006157 Dihydroneopterin aldolase/epimerase domain GO:0004150|GO:0006760 KEGG: 00790+4.1.2.25|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539 CI104_RS05160 5d9fad1c4b60e8dacb3fb4e32b64e9b0 159 Pfam PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) 5 134 2.6E-36 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CI104_RS05160 5d9fad1c4b60e8dacb3fb4e32b64e9b0 159 SUPERFAMILY SSF55083 1 154 5.1E-54 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CI104_RS05160 5d9fad1c4b60e8dacb3fb4e32b64e9b0 159 TIGRFAM TIGR01498 folK: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase 4 134 1.4E-45 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CI104_RS05160 5d9fad1c4b60e8dacb3fb4e32b64e9b0 159 ProSitePatterns PS00794 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase signature. 89 100 - T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CI104_RS05160 5d9fad1c4b60e8dacb3fb4e32b64e9b0 159 Gene3D G3DSA:3.30.70.560 1 158 1.1E-55 T 28-03-2018 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK GO:0003848|GO:0009396 KEGG: 00790+2.7.6.3|MetaCyc: PWY-6147|MetaCyc: PWY-6148|MetaCyc: PWY-6797|MetaCyc: PWY-7539|MetaCyc: PWY-7852|MetaCyc: PWY-7853 CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 Pfam PF17154 Gammaproteobacterial periplasmic sensor domain 36 155 1.7E-49 T 28-03-2018 IPR033419 Gammaproteobacterial periplasmic sensor domain GAPES3 CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 Pfam PF00990 Diguanylate cyclase, GGDEF domain 247 394 8.8E-10 T 28-03-2018 IPR000160 GGDEF domain CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 Gene3D G3DSA:3.30.70.270 241 405 2.8E-21 T 28-03-2018 CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 SUPERFAMILY SSF141868 413 660 2.88E-75 T 28-03-2018 IPR001633 EAL domain CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 SUPERFAMILY SSF55073 249 400 1.02E-16 T 28-03-2018 IPR029787 Nucleotide cyclase CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 SMART SM00052 408 653 2.5E-112 T 28-03-2018 IPR001633 EAL domain CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 SMART SM00267 231 398 4.4E-32 T 28-03-2018 IPR000160 GGDEF domain CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 Gene3D G3DSA:3.20.20.450 406 657 4.2E-85 T 28-03-2018 IPR001633 EAL domain CI104_RS01070 784927d4f7f27efe57ee30ff730bd138 662 Pfam PF00563 EAL domain 415 647 4.2E-64 T 28-03-2018 IPR001633 EAL domain CI104_RS01780 cb125c371aa590c311da207c1fddf37b 134 Pfam PF10748 Protein of unknown function (DUF2531) 7 134 9.4E-52 T 28-03-2018 IPR019684 HofP protein CI104_RS28355 104648c54a6e1b871481952cc0789165 879 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 39 278 2.1E-50 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CI104_RS28355 104648c54a6e1b871481952cc0789165 879 TIGRFAM TIGR02746 TraC-F-type: type-IV secretion system protein TraC 45 855 1.2E-259 T 28-03-2018 IPR014117 Type-IV secretion system protein TraC CI104_RS28355 104648c54a6e1b871481952cc0789165 879 Gene3D G3DSA:3.40.50.300 376 789 1.9E-14 T 28-03-2018 CI104_RS28355 104648c54a6e1b871481952cc0789165 879 SUPERFAMILY SSF52540 443 769 4.06E-34 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01135 bfb2afb67ec1e93ca48888f066b19e8c 184 Gene3D G3DSA:3.40.630.30 1 178 5.0E-37 T 28-03-2018 CI104_RS01135 bfb2afb67ec1e93ca48888f066b19e8c 184 SUPERFAMILY SSF55729 2 170 1.14E-43 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS01135 bfb2afb67ec1e93ca48888f066b19e8c 184 Pfam PF13302 Acetyltransferase (GNAT) domain 8 145 1.1E-27 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS20940 9684fd3fc0f1072d9f0711c942a7bbd4 195 TIGRFAM TIGR03310 matur_MocA_YgfJ: molybdenum cofactor cytidylyltransferase 5 184 6.0E-58 T 28-03-2018 IPR017696 Molybdenum cofactor cytidylyltransferase KEGG: 00790+2.7.7.76|MetaCyc: PWY-6476 CI104_RS20940 9684fd3fc0f1072d9f0711c942a7bbd4 195 SUPERFAMILY SSF53448 1 186 6.98E-21 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS20940 9684fd3fc0f1072d9f0711c942a7bbd4 195 Pfam PF12804 MobA-like NTP transferase domain 6 147 2.0E-23 T 28-03-2018 IPR025877 MobA-like NTP transferase CI104_RS20940 9684fd3fc0f1072d9f0711c942a7bbd4 195 Gene3D G3DSA:3.90.550.10 1 193 5.1E-24 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 Pfam PF13650 Aspartyl protease 203 300 1.5E-14 T 28-03-2018 CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 Gene3D G3DSA:1.25.40.10 32 112 8.1E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 SUPERFAMILY SSF48452 69 154 8.28E-7 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 Gene3D G3DSA:2.40.70.10 196 331 1.1E-17 T 28-03-2018 IPR021109 Aspartic peptidase domain CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 Gene3D G3DSA:2.40.70.10 344 476 6.3E-4 T 28-03-2018 IPR021109 Aspartic peptidase domain CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 Gene3D G3DSA:1.25.40.10 113 175 3.1E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS21820 5d767fb2c6b4a8dc78acd3a1d4be2025 476 SUPERFAMILY SSF50630 192 273 1.14E-10 T 28-03-2018 IPR021109 Aspartic peptidase domain CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 Gene3D G3DSA:1.10.10.60 6 59 6.2E-13 T 28-03-2018 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 Gene3D G3DSA:1.10.10.60 60 121 5.8E-12 T 28-03-2018 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 73 88 9.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 88 104 9.1E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 SMART SM00871 126 288 2.0E-11 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 Gene3D G3DSA:3.20.80.10 122 289 1.6E-21 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 SUPERFAMILY SSF46689 57 108 3.99E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 Pfam PF12833 Helix-turn-helix domain 27 105 2.5E-19 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 SUPERFAMILY SSF55136 122 288 8.89E-50 T 28-03-2018 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 SMART SM00342 21 104 2.7E-30 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 Pfam PF06445 GyrI-like small molecule binding domain 127 288 4.6E-20 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain CI104_RS04420 85bd6a2170212bc0812c98bd8acf87f1 289 SUPERFAMILY SSF46689 6 55 1.04E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS01480 6989fc90b7020f0e026c00db711d1b11 281 SUPERFAMILY SSF161098 4 277 7.57E-57 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01480 6989fc90b7020f0e026c00db711d1b11 281 Gene3D G3DSA:1.10.3720.10 68 278 3.3E-30 T 28-03-2018 CI104_RS01480 6989fc90b7020f0e026c00db711d1b11 281 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 94 276 1.8E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 16 314 3.0E-100 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 SMART SM00363 20 79 9.9E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 SUPERFAMILY SSF55174 19 70 4.42E-9 T 28-03-2018 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 Pfam PF01479 S4 domain 20 66 1.7E-10 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 140 154 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 SUPERFAMILY SSF55120 95 314 1.58E-66 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 Gene3D G3DSA:3.10.290.10 8 79 2.2E-14 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 Pfam PF00849 RNA pseudouridylate synthase 101 249 3.7E-30 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS10500 584779573a917f1a2515e3d74e2c8f0b 317 Gene3D G3DSA:3.30.2350.10 92 317 1.8E-69 T 28-03-2018 CI104_RS09590 2e75d83fa90a332e5538d3f01db75ad0 380 Pfam PF04865 Baseplate J-like protein 67 344 4.3E-62 T 28-03-2018 IPR006949 Baseplate protein J-like CI104_RS27865 6a1d5a745e55b5ff814c9baa1b4e1b4f 76 ProDom PD028015 PLASMID YKFF YDEA R0111 YPJI YPMT1.60C C4569 AEC70 PSLT067 YFJA 5 76 2.0E-29 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CI104_RS27865 6a1d5a745e55b5ff814c9baa1b4e1b4f 76 Pfam PF06006 Bacterial protein of unknown function (DUF905) 7 74 8.2E-42 T 28-03-2018 IPR009253 Protein of unknown function DUF905 CI104_RS27865 6a1d5a745e55b5ff814c9baa1b4e1b4f 76 SUPERFAMILY SSF54786 12 75 1.73E-30 T 28-03-2018 CI104_RS27865 6a1d5a745e55b5ff814c9baa1b4e1b4f 76 Gene3D G3DSA:3.30.160.130 6 74 5.7E-41 T 28-03-2018 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 SUPERFAMILY SSF46626 169 320 2.83E-45 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 Gene3D G3DSA:1.10.760.10 29 158 0.014 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 Gene3D G3DSA:1.10.760.10 173 335 1.0E-40 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 Gene3D G3DSA:1.10.760.10 336 462 6.4E-19 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 Pfam PF00034 Cytochrome c 340 453 5.3E-7 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 SUPERFAMILY SSF46626 321 460 6.07E-39 T 28-03-2018 IPR009056 Cytochrome c-like domain GO:0009055|GO:0020037 Reactome: R-HSA-611105 CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 Pfam PF14376 Haem-binding domain 18 152 2.5E-35 T 28-03-2018 IPR025992 Haem-binding domain CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 SMART SM01235 16 155 6.9E-55 T 28-03-2018 IPR025992 Haem-binding domain CI104_RS01150 44ad2682e71ab2791ba74d5393b27153 464 Pfam PF03150 Di-haem cytochrome c peroxidase 185 332 3.2E-46 T 28-03-2018 IPR004852 Di-haem cytochrome c peroxidase GO:0016491|GO:0055114 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 325 345 4.0E-26 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 28 42 4.0E-26 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 302 320 4.0E-26 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 283 300 4.0E-26 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 63 83 4.0E-26 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 SUPERFAMILY SSF53335 8 188 8.39E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 SUPERFAMILY SSF53335 267 345 8.39E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 Gene3D G3DSA:3.40.50.150 10 349 1.5E-56 T 28-03-2018 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 32 38 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS11115 b5f68b4b0d53d0e1ddf59fd5dcf6a315 350 Pfam PF01555 DNA methylase 29 337 1.0E-42 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS07285 65074a0febf625dcdadbe0ddffd4d626 402 SUPERFAMILY SSF81296 7 156 3.08E-48 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS07285 65074a0febf625dcdadbe0ddffd4d626 402 Gene3D G3DSA:3.40.50.1820 151 401 1.2E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS07285 65074a0febf625dcdadbe0ddffd4d626 402 Pfam PF00756 Putative esterase 178 397 4.8E-40 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CI104_RS07285 65074a0febf625dcdadbe0ddffd4d626 402 Gene3D G3DSA:2.60.40.10 5 148 1.2E-44 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS07285 65074a0febf625dcdadbe0ddffd4d626 402 Pfam PF11806 Domain of unknown function (DUF3327) 31 161 2.6E-44 T 28-03-2018 IPR021764 Enterochelin esterase, N-terminal GO:0005506|GO:0005737|GO:0006826|GO:0008849 CI104_RS07285 65074a0febf625dcdadbe0ddffd4d626 402 SUPERFAMILY SSF53474 161 399 3.45E-46 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS19710 f2fcee31426661e7747077d56ea0220f 359 Gene3D G3DSA:1.10.8.350 129 233 3.4E-36 T 28-03-2018 CI104_RS19710 f2fcee31426661e7747077d56ea0220f 359 Gene3D G3DSA:1.10.8.350 52 128 2.6E-9 T 28-03-2018 CI104_RS19710 f2fcee31426661e7747077d56ea0220f 359 Pfam PF13406 Transglycosylase SLT domain 57 351 7.4E-93 T 28-03-2018 IPR031304 Transglycosylase SLT domain 2 CI104_RS19710 f2fcee31426661e7747077d56ea0220f 359 SUPERFAMILY SSF53955 46 354 1.09E-100 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS19710 f2fcee31426661e7747077d56ea0220f 359 TIGRFAM TIGR02282 MltB: lytic murein transglycosylase B 61 353 5.3E-129 T 28-03-2018 IPR011757 Lytic transglycosylase MltB CI104_RS19710 f2fcee31426661e7747077d56ea0220f 359 Gene3D G3DSA:1.10.530.10 239 359 8.6E-34 T 28-03-2018 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 PIRSF PIRSF005751 1 351 3.3E-137 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 SUPERFAMILY SSF55729 39 118 7.75E-10 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 Pfam PF08218 Citrate lyase ligase C-terminal domain 147 333 2.2E-80 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 Gene3D G3DSA:3.40.50.620 126 337 2.7E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 TIGRFAM TIGR00124 cit_ly_ligase: [citrate (pro-3S)-lyase] ligase 7 338 1.4E-166 T 28-03-2018 IPR005216 Citrate lyase ligase GO:0008771 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 SUPERFAMILY SSF52374 144 336 2.81E-23 T 28-03-2018 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 SMART SM00764 147 333 2.3E-132 T 28-03-2018 IPR013166 Citrate lyase ligase, C-terminal GO:0008771 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 TIGRFAM TIGR00125 cyt_tran_rel: cytidyltransferase-like domain 147 200 1.2E-10 T 28-03-2018 IPR004821 Cytidyltransferase-like domain GO:0003824|GO:0009058 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 ProDom PD016147 LIGASE LYASE CITRATE PRO-3S-LYASE SYNTHETASE TRANSFERASE CYTIDYLTRANSFERASE-RELATED:CITRATE ACETATE:SH-CITRATE CITC PLASMID 121 338 2.0E-117 T 28-03-2018 CI104_RS07450 2136649ea9ce5551c48dba5b472169c2 358 Gene3D G3DSA:3.40.630.30 9 125 7.1E-7 T 28-03-2018 CI104_RS03490 a46696186c7d904321f998be41cc328e 314 Gene3D G3DSA:1.20.120.330 66 257 3.1E-4 T 28-03-2018 CI104_RS06380 bf7fcfa5a6ddd9af81788c8c3b7e10ef 204 TIGRFAM TIGR02842 CyoC: cytochrome o ubiquinol oxidase, subunit III 25 204 1.7E-88 T 28-03-2018 IPR014206 Cytochrome o ubiquinol oxidase, subunit III GO:0005886|GO:0008827|GO:0019646 CI104_RS06380 bf7fcfa5a6ddd9af81788c8c3b7e10ef 204 SUPERFAMILY SSF81452 12 202 1.96E-59 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06380 bf7fcfa5a6ddd9af81788c8c3b7e10ef 204 Gene3D G3DSA:1.20.120.80 19 204 3.8E-53 T 28-03-2018 IPR013833 Cytochrome c oxidase, subunit III, 4-helical bundle GO:0004129|GO:0016020|GO:0022904 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS06380 bf7fcfa5a6ddd9af81788c8c3b7e10ef 204 Pfam PF00510 Cytochrome c oxidase subunit III 15 202 5.0E-16 T 28-03-2018 IPR000298 Cytochrome c oxidase-like subunit III GO:0015002|GO:0016020 Reactome: R-HSA-5628897|Reactome: R-HSA-611105 CI104_RS08765 a727e82f195fa5eac9edff9fbd7c80ca 171 Pfam PF12883 Protein of unknown function (DUF3828) 40 154 1.2E-24 T 28-03-2018 IPR024289 Domain of unknown function DUF3828 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 ProSitePatterns PS00635 Gram-negative pili assembly chaperone signature. 103 120 - T 28-03-2018 IPR018046 Pili assembly chaperone, conserved site CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 Pfam PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain 28 145 3.0E-36 T 28-03-2018 IPR016147 Pili assembly chaperone, N-terminal GO:0030288|GO:0071555 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 Gene3D G3DSA:2.60.40.10 150 243 3.0E-22 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 Pfam PF02753 Pili assembly chaperone PapD, C-terminal domain 171 231 4.9E-14 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 SUPERFAMILY SSF49354 28 145 1.75E-38 T 28-03-2018 IPR008962 PapD-like CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 PRINTS PR00969 Pili chaperone signature 165 180 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 PRINTS PR00969 Pili chaperone signature 28 37 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 PRINTS PR00969 Pili chaperone signature 104 121 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 PRINTS PR00969 Pili chaperone signature 74 95 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 PRINTS PR00969 Pili chaperone signature 127 142 3.0E-32 T 28-03-2018 IPR001829 Pili assembly chaperone, bacterial GO:0030288|GO:0043711|GO:0061077 CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 SUPERFAMILY SSF49584 154 244 2.35E-23 T 28-03-2018 IPR016148 Pili assembly chaperone, C-terminal CI104_RS04105 bd35d812a2d461a7226fd7990fda6320 250 Gene3D G3DSA:2.60.40.10 27 146 2.2E-34 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS24105 60a82a9d8c26e10823c1d98037520fca 176 SUPERFAMILY SSF56235 2 172 2.44E-58 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS24105 60a82a9d8c26e10823c1d98037520fca 176 Hamap MF_00248 ATP-dependent protease subunit HslV [hslV]. 1 172 41.738 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CI104_RS24105 60a82a9d8c26e10823c1d98037520fca 176 Gene3D G3DSA:3.60.20.10 2 172 1.1E-31 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS24105 60a82a9d8c26e10823c1d98037520fca 176 TIGRFAM TIGR03692 ATP_dep_HslV: ATP-dependent protease HslVU, peptidase subunit 2 172 2.7E-86 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CI104_RS24105 60a82a9d8c26e10823c1d98037520fca 176 Pfam PF00227 Proteasome subunit 2 167 7.3E-23 T 28-03-2018 IPR001353 Proteasome, subunit alpha/beta GO:0004298|GO:0005839|GO:0051603 Reactome: R-HSA-1169091|Reactome: R-HSA-1234176|Reactome: R-HSA-1236974|Reactome: R-HSA-1236978|Reactome: R-HSA-174084|Reactome: R-HSA-174113|Reactome: R-HSA-174154|Reactome: R-HSA-174178|Reactome: R-HSA-174184|Reactome: R-HSA-180534|Reactome: R-HSA-180585|Reactome: R-HSA-187577|Reactome: R-HSA-195253|Reactome: R-HSA-202424|Reactome: R-HSA-211733|Reactome: R-HSA-2467813|Reactome: R-HSA-2871837|Reactome: R-HSA-349425|Reactome: R-HSA-350562|Reactome: R-HSA-382556|Reactome: R-HSA-446652|Reactome: R-HSA-450408|Reactome: R-HSA-4608870|Reactome: R-HSA-4641257|Reactome: R-HSA-4641258|Reactome: R-HSA-5358346|Reactome: R-HSA-5362768|Reactome: R-HSA-5607761|Reactome: R-HSA-5607764|Reactome: R-HSA-5610780|Reactome: R-HSA-5610783|Reactome: R-HSA-5610785|Reactome: R-HSA-5632684|Reactome: R-HSA-5658442|Reactome: R-HSA-5668541|Reactome: R-HSA-5676590|Reactome: R-HSA-5678895|Reactome: R-HSA-5687128|Reactome: R-HSA-5689603|Reactome: R-HSA-5689880|Reactome: R-HSA-68827|Reactome: R-HSA-68949|Reactome: R-HSA-69017|Reactome: R-HSA-69229|Reactome: R-HSA-69481|Reactome: R-HSA-69601|Reactome: R-HSA-8852276|Reactome: R-HSA-8854050|Reactome: R-HSA-8941858|Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CI104_RS24105 60a82a9d8c26e10823c1d98037520fca 176 PIRSF PIRSF039093 1 175 2.9E-87 T 28-03-2018 IPR022281 ATP-dependent protease, HslV subunit GO:0004298|GO:0006508|GO:0009376 CI104_RS15985 67a091cc9428cf061c27ae0c2489d2de 265 Hamap MF_01593 Protein MtfA [mtfA]. 1 265 63.507 T 28-03-2018 IPR010384 MtfA family CI104_RS15985 67a091cc9428cf061c27ae0c2489d2de 265 Gene3D G3DSA:3.40.390.10 78 245 1.6E-23 T 28-03-2018 IPR024079 Metallopeptidase, catalytic domain GO:0008237 CI104_RS15985 67a091cc9428cf061c27ae0c2489d2de 265 SUPERFAMILY SSF55486 34 245 1.1E-41 T 28-03-2018 CI104_RS15985 67a091cc9428cf061c27ae0c2489d2de 265 Pfam PF06167 Glucose-regulated metallo-peptidase M90 14 243 2.9E-64 T 28-03-2018 IPR010384 MtfA family CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 SMART SM00382 49 332 2.7E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Hamap MF_00249 ATP-dependent protease ATPase subunit HslU [hslU]. 1 443 43.698 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Gene3D G3DSA:1.10.8.60 335 431 2.5E-29 T 28-03-2018 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Pfam PF07724 AAA domain (Cdc48 subfamily) 188 329 3.7E-43 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Gene3D G3DSA:1.10.8.10 123 200 7.5E-30 T 28-03-2018 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Gene3D G3DSA:1.10.8.10 201 243 2.0E-18 T 28-03-2018 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 SUPERFAMILY SSF52540 3 441 1.87E-94 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 135 4.5E-7 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Pfam PF10431 C-terminal, D2-small domain, of ClpB protein 335 405 5.9E-6 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 Gene3D G3DSA:3.40.50.300 7 122 1.1E-5 T 28-03-2018 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 TIGRFAM TIGR00390 hslU: ATP-dependent protease HslVU, ATPase subunit 4 443 1.5E-236 T 28-03-2018 IPR004491 Heat shock protein HslU GO:0005524|GO:0005737|GO:0009376|GO:0016887|GO:0070011 CI104_RS24110 dfa63f10d94f414c74f15c4ace5c2cfa 443 SMART SM01086 335 434 1.0E-22 T 28-03-2018 IPR019489 Clp ATPase, C-terminal CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 Hamap MF_00902 Sec-independent protein translocase protein TatC [tatC]. 4 241 18.295 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 TIGRFAM TIGR00945 tatC: twin arginine-targeting protein translocase TatC 9 226 1.6E-80 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 8 35 1.1E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 154 182 1.1E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 85 103 1.1E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 PRINTS PR01840 Bacterial Sec-independent translocation TatC protein family signature 103 129 1.1E-50 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 Pfam PF00902 Sec-independent protein translocase protein (TatC) 12 221 2.0E-67 T 28-03-2018 IPR002033 Sec-independent periplasmic protein translocase TatC GO:0016021 CI104_RS24680 ec5997d82aa2cc45e94dbcb5add0f6c0 261 ProSitePatterns PS01218 TatC family signature. 154 173 - T 28-03-2018 IPR019820 Sec-independent periplasmic protein translocase, conserved site CI104_RS19085 d908aab4faa1595469695c69990dff24 160 ProSitePatterns PS01317 SsrA-binding protein. 32 44 - T 28-03-2018 IPR020081 SsrA-binding protein, conserved site CI104_RS19085 d908aab4faa1595469695c69990dff24 160 SUPERFAMILY SSF74982 8 138 3.14E-50 T 28-03-2018 IPR023620 Small protein B CI104_RS19085 d908aab4faa1595469695c69990dff24 160 Pfam PF01668 SmpB protein 14 157 2.4E-56 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CI104_RS19085 d908aab4faa1595469695c69990dff24 160 TIGRFAM TIGR00086 smpB: SsrA-binding protein 14 156 1.6E-53 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CI104_RS19085 d908aab4faa1595469695c69990dff24 160 Gene3D G3DSA:2.40.280.10 14 133 2.9E-45 T 28-03-2018 IPR023620 Small protein B CI104_RS19085 d908aab4faa1595469695c69990dff24 160 Hamap MF_00023 SsrA-binding protein [smpB]. 1 160 71.938 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CI104_RS19085 d908aab4faa1595469695c69990dff24 160 ProDom PD004488 SSRA-BINDING RNA-BINDING SMPB SMALL B TMRNA-BINDING SSRA 3D-STRUCTURE HOMOLOG BINDING 14 138 8.0E-69 T 28-03-2018 IPR000037 SsrA-binding protein GO:0003723 CI104_RS04745 0e6b81bec33f43873ac2eeadfca22310 219 Gene3D G3DSA:3.30.2350.10 14 216 1.0E-58 T 28-03-2018 CI104_RS04745 0e6b81bec33f43873ac2eeadfca22310 219 TIGRFAM TIGR00005 rluA_subfam: pseudouridine synthase, RluA family 6 218 2.1E-59 T 28-03-2018 IPR006225 Pseudouridine synthase, RluC/RluD GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS04745 0e6b81bec33f43873ac2eeadfca22310 219 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 60 74 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS04745 0e6b81bec33f43873ac2eeadfca22310 219 Pfam PF00849 RNA pseudouridylate synthase 22 169 1.5E-28 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS04745 0e6b81bec33f43873ac2eeadfca22310 219 SUPERFAMILY SSF55120 8 216 2.56E-62 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS10720 1a2988e181737774116db219fe4bfb86 245 SUPERFAMILY SSF53955 76 241 1.31E-32 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS10720 1a2988e181737774116db219fe4bfb86 245 Pfam PF01464 Transglycosylase SLT domain 98 193 3.0E-13 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS10720 1a2988e181737774116db219fe4bfb86 245 Gene3D G3DSA:1.10.530.10 56 233 3.3E-27 T 28-03-2018 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 SUPERFAMILY SSF52172 2 161 1.34E-26 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 Pfam PF04397 LytTr DNA-binding domain 146 242 3.8E-33 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 SMART SM00448 1 112 3.9E-20 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 Gene3D G3DSA:2.40.50.40 142 205 1.3E-17 T 28-03-2018 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 Pfam PF00072 Response regulator receiver domain 3 112 6.8E-24 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 Gene3D G3DSA:3.40.50.2300 1 141 2.8E-24 T 28-03-2018 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 SMART SM00850 145 243 1.2E-38 T 28-03-2018 IPR007492 LytTR DNA-binding domain GO:0003677 CI104_RS17955 3ec4786116f8660a18ad27875fbc5004 244 Gene3D G3DSA:2.20.25.10 206 243 6.3E-18 T 28-03-2018 CI104_RS14770 0932bd2b05c4eb1053d10fef82cf2894 180 PIRSF PIRSF012337 3 179 6.0E-45 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CI104_RS14770 0932bd2b05c4eb1053d10fef82cf2894 180 Pfam PF06890 Bacteriophage Mu Gp45 protein 24 155 1.5E-37 T 28-03-2018 IPR014462 Phage-associated protein Gp45 CI104_RS14770 0932bd2b05c4eb1053d10fef82cf2894 180 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 17 171 4.6E-23 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Gene3D G3DSA:1.10.8.60 314 391 9.1E-28 T 28-03-2018 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 SMART SM00448 6 117 1.3E-37 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Pfam PF00158 Sigma-54 interaction domain 141 308 1.0E-72 T 28-03-2018 IPR002078 RNA polymerase sigma factor 54 interaction domain GO:0005524|GO:0006355|GO:0008134 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 SMART SM00382 161 304 2.3E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 SUPERFAMILY SSF52172 5 184 2.42E-47 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Gene3D G3DSA:3.40.50.2300 3 145 5.6E-38 T 28-03-2018 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Gene3D G3DSA:1.10.10.60 395 441 2.7E-15 T 28-03-2018 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 408 425 1.2E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 PRINTS PR01590 FIS bacterial regulatory protein HTH signature 425 441 1.2E-11 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Pfam PF00072 Response regulator receiver domain 8 117 5.3E-30 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Pfam PF02954 Bacterial regulatory protein, Fis family 403 439 8.3E-15 T 28-03-2018 IPR002197 DNA binding HTH domain, Fis-type GO:0043565 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 Gene3D G3DSA:3.40.50.300 146 313 9.5E-31 T 28-03-2018 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 SUPERFAMILY SSF46689 396 439 1.91E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 ProSitePatterns PS00688 Sigma-54 interaction domain C-terminal part signature. 354 363 - T 28-03-2018 IPR025944 Sigma-54 interaction domain, conserved site CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 ProSitePatterns PS00675 Sigma-54 interaction domain ATP-binding region A signature. 165 178 - T 28-03-2018 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 SUPERFAMILY SSF52540 141 385 3.23E-75 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23665 bcd1538f1dd08f0210715e38b9e86c7d 441 ProSitePatterns PS00676 Sigma-54 interaction domain ATP-binding region B signature. 227 242 - T 28-03-2018 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 Hamap MF_00970 Ribonuclease E [rne]. 1 1080 39.455 T 28-03-2018 IPR028878 Ribonuclease E GO:0006396|GO:0008995 CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 Pfam PF10150 Ribonuclease E/G family 121 391 3.2E-93 T 28-03-2018 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G GO:0003723 CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 TIGRFAM TIGR00757 RNaseEG: ribonuclease, Rne/Rng family 13 425 1.4E-171 T 28-03-2018 IPR004659 Ribonuclease E/G GO:0003723|GO:0004540|GO:0006396 CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 Pfam PF12111 Polyribonucleotide phosphorylase C terminal 1057 1091 2.3E-16 T 28-03-2018 IPR021968 Polyribonucleotide phosphorylase C-terminal CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 SMART SM00316 37 119 9.9E-12 T 28-03-2018 IPR022967 RNA-binding domain, S1 CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 SUPERFAMILY SSF50249 40 124 1.61E-20 T 28-03-2018 IPR012340 Nucleic acid-binding, OB-fold CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 Gene3D G3DSA:2.40.50.140 33 124 2.9E-31 T 28-03-2018 CI104_RS10490 01f1a4b2f83651cabdbebf3e748c42e7 1094 Pfam PF00575 S1 RNA binding domain 36 118 3.7E-16 T 28-03-2018 IPR003029 S1 domain GO:0003676 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 SUPERFAMILY SSF159871 107 177 6.54E-17 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 Gene3D G3DSA:3.30.1660.10 22 90 1.2E-20 T 28-03-2018 IPR025543 Dodecin-like CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 SUPERFAMILY SSF159871 239 314 1.83E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 SUPERFAMILY SSF159871 3 93 4.45E-23 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 PIRSF PIRSF014774 1 314 1.6E-182 T 28-03-2018 IPR025539 YdgH protein CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 Pfam PF07338 Protein of unknown function (DUF1471) 259 314 2.2E-20 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 Pfam PF07338 Protein of unknown function (DUF1471) 34 90 1.5E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 Pfam PF07338 Protein of unknown function (DUF1471) 118 174 2.3E-18 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 Gene3D G3DSA:3.30.1660.10 106 174 4.3E-17 T 28-03-2018 IPR025543 Dodecin-like CI104_RS12615 6b59b2be21e9e40c9dd63817ceb70922 314 Gene3D G3DSA:3.30.1660.10 247 314 1.2E-22 T 28-03-2018 IPR025543 Dodecin-like CI104_RS26200 115e7cc0623364d322fe961e483a45a9 141 SUPERFAMILY SSF52833 3 137 1.48E-38 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS26200 115e7cc0623364d322fe961e483a45a9 141 Gene3D G3DSA:3.40.30.10 1 141 2.7E-43 T 28-03-2018 CI104_RS26200 115e7cc0623364d322fe961e483a45a9 141 Pfam PF03960 ArsC family 7 114 3.2E-18 T 28-03-2018 IPR006660 Arsenate reductase-like CI104_RS26200 115e7cc0623364d322fe961e483a45a9 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 2.4E-40 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CI104_RS24170 a548fed79a4d0b771f0192fecd217c7b 490 Pfam PF00939 Sodium:sulfate symporter transmembrane region 9 490 1.1E-127 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS24170 a548fed79a4d0b771f0192fecd217c7b 490 PIRSF PIRSF002457 3 490 1.0E-124 T 28-03-2018 IPR030676 Citrate carrier CitT-related CI104_RS24170 a548fed79a4d0b771f0192fecd217c7b 490 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 27 484 1.6E-106 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS24735 0d5c055fa0bf71ce070318528a1a572c 299 Pfam PF00892 EamA-like transporter family 2 128 3.0E-8 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS24735 0d5c055fa0bf71ce070318528a1a572c 299 Pfam PF00892 EamA-like transporter family 139 274 1.6E-11 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS24735 0d5c055fa0bf71ce070318528a1a572c 299 SUPERFAMILY SSF103481 200 278 8.76E-9 T 28-03-2018 CI104_RS24735 0d5c055fa0bf71ce070318528a1a572c 299 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 11 273 1.8E-90 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 CI104_RS24735 0d5c055fa0bf71ce070318528a1a572c 299 SUPERFAMILY SSF103481 35 130 1.57E-5 T 28-03-2018 CI104_RS18010 92690377289e95172d4eec607a000bfc 400 Pfam PF07662 Na+ dependent nucleoside transporter C-terminus 193 398 7.1E-59 T 28-03-2018 IPR011657 Concentrative nucleoside transporter C-terminal domain Reactome: R-HSA-83936 CI104_RS18010 92690377289e95172d4eec607a000bfc 400 TIGRFAM TIGR00804 nupC: nucleoside transporter, NupC family 5 398 2.3E-146 T 28-03-2018 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial GO:0005337|GO:0016020|GO:1901642 Reactome: R-HSA-83936 CI104_RS18010 92690377289e95172d4eec607a000bfc 400 Pfam PF07670 Nucleoside recognition 92 189 6.2E-7 T 28-03-2018 IPR011642 Nucleoside transporter/FeoB GTPase, Gate domain Reactome: R-HSA-83936 CI104_RS18010 92690377289e95172d4eec607a000bfc 400 Pfam PF01773 Na+ dependent nucleoside transporter N-terminus 10 82 1.1E-20 T 28-03-2018 IPR002668 Concentrative nucleoside transporter N-terminal domain Reactome: R-HSA-83936 CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 Hamap MF_01818 Ribonuclease BN [rbn]. 1 305 38.847 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 TIGRFAM TIGR02649 true_RNase_BN: ribonuclease BN 2 305 2.8E-187 T 28-03-2018 IPR013469 Ribonuclease BN GO:0016891|GO:0042779 CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 Pfam PF00753 Metallo-beta-lactamase superfamily 36 144 8.1E-9 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 Pfam PF12706 Beta-lactamase superfamily domain 202 270 8.0E-7 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 Gene3D G3DSA:3.60.15.10 1 305 5.6E-57 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 SUPERFAMILY SSF56281 1 304 1.49E-84 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS17480 568957750047b79fe79238dc76fa8efc 305 TIGRFAM TIGR02651 RNase_Z: ribonuclease Z 3 304 4.2E-102 T 28-03-2018 IPR013471 Ribonuclease Z/BN GO:0016891|GO:0042779 CI104_RS00200 cd997deac37cf0b38cf7df2ed9a2cc6b 500 SUPERFAMILY SSF55874 381 497 1.92E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00200 cd997deac37cf0b38cf7df2ed9a2cc6b 500 Pfam PF05231 MASE1 11 275 5.0E-14 T 28-03-2018 IPR007895 MASE1 CI104_RS00200 cd997deac37cf0b38cf7df2ed9a2cc6b 500 Gene3D G3DSA:3.30.565.10 273 498 1.0E-20 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00200 cd997deac37cf0b38cf7df2ed9a2cc6b 500 SMART SM00387 409 499 1.7E-10 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS00200 cd997deac37cf0b38cf7df2ed9a2cc6b 500 Pfam PF07730 Histidine kinase 305 370 2.1E-14 T 28-03-2018 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain GO:0000155|GO:0000160|GO:0016021|GO:0046983 CI104_RS00200 cd997deac37cf0b38cf7df2ed9a2cc6b 500 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 413 498 6.2E-7 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS15960 ba0fa21c921a7ce2af263038ee4551cb 232 SUPERFAMILY SSF109604 4 215 1.38E-58 T 28-03-2018 CI104_RS15960 ba0fa21c921a7ce2af263038ee4551cb 232 SMART SM00471 22 141 4.4E-7 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS15960 ba0fa21c921a7ce2af263038ee4551cb 232 Gene3D G3DSA:1.10.3210.10 7 230 8.3E-16 T 28-03-2018 CI104_RS15960 ba0fa21c921a7ce2af263038ee4551cb 232 Pfam PF01966 HD domain 29 131 4.4E-11 T 28-03-2018 IPR006674 HD domain CI104_RS04355 d39da2450b1859ffe6d3f6971e17e5bd 407 SUPERFAMILY SSF103473 10 404 6.54E-90 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS04355 d39da2450b1859ffe6d3f6971e17e5bd 407 Gene3D G3DSA:1.20.1250.20 18 214 2.0E-43 T 28-03-2018 CI104_RS04355 d39da2450b1859ffe6d3f6971e17e5bd 407 Gene3D G3DSA:1.20.1250.20 215 407 2.9E-37 T 28-03-2018 CI104_RS04355 d39da2450b1859ffe6d3f6971e17e5bd 407 Pfam PF07690 Major Facilitator Superfamily 27 368 9.1E-63 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS04355 d39da2450b1859ffe6d3f6971e17e5bd 407 ProSitePatterns PS00217 Sugar transport proteins signature 2. 118 143 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS17995 6721c905bb199fbf9cf8d69497383a45 332 Pfam PF00248 Aldo/keto reductase family 28 328 7.7E-70 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS17995 6721c905bb199fbf9cf8d69497383a45 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 270 282 1.1E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CI104_RS17995 6721c905bb199fbf9cf8d69497383a45 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 283 296 1.1E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CI104_RS17995 6721c905bb199fbf9cf8d69497383a45 332 PRINTS PR01577 KCNAB voltage-gated K+ channel beta subunit family signature 126 136 1.1E-5 T 28-03-2018 IPR005399 Potassium channel, voltage-dependent, beta subunit, KCNAB-related Reactome: R-HSA-1296072 CI104_RS17995 6721c905bb199fbf9cf8d69497383a45 332 Gene3D G3DSA:3.20.20.100 15 332 2.3E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS17995 6721c905bb199fbf9cf8d69497383a45 332 SUPERFAMILY SSF51430 13 329 1.96E-90 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 Pfam PF01565 FAD binding domain 20 149 8.1E-24 T 28-03-2018 IPR006094 FAD linked oxidase, N-terminal GO:0016491|GO:0050660|GO:0055114 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 Gene3D G3DSA:3.30.465.10 69 218 4.2E-48 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 TIGRFAM TIGR00179 murB: UDP-N-acetylenolpyruvoylglucosamine reductase 5 330 3.1E-119 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 Gene3D G3DSA:3.30.43.10 3 68 1.9E-18 T 28-03-2018 IPR016167 FAD-binding, type 2, subdomain 1 GO:0003824|GO:0050660|GO:0055114 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 Gene3D G3DSA:3.90.78.10 221 334 3.9E-41 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 Hamap MF_00037 UDP-N-acetylenolpyruvoylglucosamine reductase [murB]. 1 342 88.738 T 28-03-2018 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 Pfam PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain 206 329 1.3E-32 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 SUPERFAMILY SSF56194 202 340 3.53E-52 T 28-03-2018 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal GO:0008762|GO:0055114 KEGG: 00520+1.3.1.98|KEGG: 00550+1.3.1.98|MetaCyc: PWY-6386|MetaCyc: PWY-6387 CI104_RS23850 401d53ef9eb5e3554620a52b06257ae8 342 SUPERFAMILY SSF56176 3 197 1.8E-46 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS06550 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 41 16.354 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS06550 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 ProSitePatterns PS00828 Ribosomal protein L36 signature. 14 40 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS06550 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 Pfam PF00444 Ribosomal protein L36 1 41 3.3E-16 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS06550 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 SUPERFAMILY SSF57840 7 41 9.81E-14 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS06550 bdc3e71ae9a577eaa52cd35b2eadaaa7 46 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 9 41 1.6E-8 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS17110 488b47b6ba2ae57cfc56bb65ad202491 350 Pfam PF14559 Tetratricopeptide repeat 237 296 5.7E-7 T 28-03-2018 CI104_RS17110 488b47b6ba2ae57cfc56bb65ad202491 350 Pfam PF03918 Cytochrome C biogenesis protein 7 132 1.3E-50 T 28-03-2018 IPR005616 CcmH/CycL/Ccl2/NrfF family CI104_RS17110 488b47b6ba2ae57cfc56bb65ad202491 350 SUPERFAMILY SSF48452 221 328 3.5E-18 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS17110 488b47b6ba2ae57cfc56bb65ad202491 350 Gene3D G3DSA:1.25.40.10 210 350 1.1E-13 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS22450 c9908820fc1e8203902f775b2d935d70 155 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 149 7.2E-33 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS22450 c9908820fc1e8203902f775b2d935d70 155 Gene3D G3DSA:3.40.930.10 2 151 8.5E-35 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS22450 c9908820fc1e8203902f775b2d935d70 155 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 53 69 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS22450 c9908820fc1e8203902f775b2d935d70 155 SUPERFAMILY SSF55804 6 149 1.06E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS10115 87d1f64202a750b46f1ef177abebdf0f 386 Pfam PF02687 FtsX-like permease family 291 379 6.2E-12 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS10115 87d1f64202a750b46f1ef177abebdf0f 386 Gene3D G3DSA:1.20.1250.20 9 376 5.3E-5 T 28-03-2018 CI104_RS10115 87d1f64202a750b46f1ef177abebdf0f 386 Pfam PF12704 MacB-like periplasmic core domain 38 202 3.1E-10 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS00385 493a40f6c87600bd816eed11dfab0bde 281 Gene3D G3DSA:3.40.1190.20 3 278 4.3E-35 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS00385 493a40f6c87600bd816eed11dfab0bde 281 SUPERFAMILY SSF53613 4 276 5.14E-51 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS00385 493a40f6c87600bd816eed11dfab0bde 281 Pfam PF00294 pfkB family carbohydrate kinase 172 272 2.7E-11 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS00385 493a40f6c87600bd816eed11dfab0bde 281 Pfam PF00294 pfkB family carbohydrate kinase 13 134 2.7E-15 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 Pfam PF12833 Helix-turn-helix domain 202 281 2.6E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 Gene3D G3DSA:2.60.120.10 7 99 2.4E-10 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 SUPERFAMILY SSF46689 181 230 3.14E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 SMART SM00342 196 279 4.1E-28 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 SUPERFAMILY SSF51182 17 94 8.9E-11 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 SUPERFAMILY SSF46689 232 283 1.79E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 Gene3D G3DSA:3.90.1240.10 100 293 5.9E-28 T 28-03-2018 CI104_RS12045 3ea668c62ec52941d51b267b3a7e7516 296 Pfam PF07883 Cupin domain 30 90 6.1E-10 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS09560 6b60984a5aea3cbc9555c9a5557c6fc2 92 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 10 88 1.8E-7 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CI104_RS17885 4b89ffc06ee3b5863f070412b54e6dcb 157 ProDom PD049902 METHYLTRANSFERASE TRANSFERASE PRECURSOR ISOPRENYLCYSTEINE SIGNAL CARBOXYL TRANSMEMBRANE MEMBRANE FAMILY XCC3183 111 157 0.009 T 28-03-2018 CI104_RS17885 4b89ffc06ee3b5863f070412b54e6dcb 157 Pfam PF04191 Phospholipid methyltransferase 43 144 1.3E-13 T 28-03-2018 IPR007318 Phospholipid methyltransferase KEGG: 00564+2.1.1.17|MetaCyc: PWY-6825|Reactome: R-HSA-1483191 CI104_RS20485 ef4121acfad1f8393352e0b8d4d29d74 233 Gene3D G3DSA:1.10.10.10 146 233 5.5E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20485 ef4121acfad1f8393352e0b8d4d29d74 233 ProDom PD116027 TRANSCRIPTION DNA-BINDING REGULATION RMBA YQEH ORF3-QACEDELTA1 FUSION CYTOPLASMIC ECS3703 TRANSMEMBRANE 12 201 4.0E-94 T 28-03-2018 CI104_RS20485 ef4121acfad1f8393352e0b8d4d29d74 233 SUPERFAMILY SSF46894 143 195 5.44E-7 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 Gene3D G3DSA:3.90.1820.10 1 272 1.2E-61 T 28-03-2018 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 Gene3D G3DSA:3.90.1820.10 273 440 1.7E-43 T 28-03-2018 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 138 155 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 191 203 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 5 20 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 74 90 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 95 108 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 164 175 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 PRINTS PR00732 Glycosyl hydrolase family 4 signature 109 129 4.7E-59 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 SUPERFAMILY SSF51735 3 163 7.69E-53 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 Pfam PF02056 Family 4 glycosyl hydrolase 6 184 4.7E-65 T 28-03-2018 IPR001088 Glycoside hydrolase, family 4 GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 ProSitePatterns PS01324 Glycosyl hydrolases family 4 signature. 138 169 - T 28-03-2018 IPR019802 Glycoside hydrolase, family 4, conserved site GO:0004553|GO:0005975 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 SUPERFAMILY SSF56327 168 439 2.31E-93 T 28-03-2018 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal GO:0003824|GO:0005975|GO:0016616|GO:0055114 CI104_RS00100 b5ea86696614f173b4e49d48a1c88975 440 Pfam PF11975 Family 4 glycosyl hydrolase C-terminal domain 195 415 4.0E-51 T 28-03-2018 IPR022616 Glycosyl hydrolase, family 4, C-terminal GO:0004553 CI104_RS18580 0c2b5000a0cfa17f67ecbd0a594334a1 261 Pfam PF14581 SseB protein C-terminal domain 140 246 1.2E-28 T 28-03-2018 IPR027945 SseB protein, C-terminal CI104_RS18580 0c2b5000a0cfa17f67ecbd0a594334a1 261 Pfam PF07179 SseB protein N-terminal domain 11 122 4.2E-27 T 28-03-2018 IPR009839 SseB protein N-terminal domain CI104_RS17755 187e854e3cee6906e8512780600cb8c8 392 Gene3D G3DSA:1.20.1250.20 211 391 1.3E-21 T 28-03-2018 CI104_RS17755 187e854e3cee6906e8512780600cb8c8 392 Pfam PF07690 Major Facilitator Superfamily 223 390 5.0E-17 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS17755 187e854e3cee6906e8512780600cb8c8 392 SUPERFAMILY SSF103473 14 391 7.59E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS17755 187e854e3cee6906e8512780600cb8c8 392 Gene3D G3DSA:1.20.1250.20 9 204 2.7E-17 T 28-03-2018 CI104_RS16290 c6c5d0bbdcf5c0b15a9cbb6f2d39f59c 111 PIRSF PIRSF028773 1 111 5.7E-54 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CI104_RS16290 c6c5d0bbdcf5c0b15a9cbb6f2d39f59c 111 Pfam PF04363 Protein of unknown function (DUF496) 8 99 6.1E-46 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CI104_RS16290 c6c5d0bbdcf5c0b15a9cbb6f2d39f59c 111 Hamap MF_00683 UPF0265 protein YeeX [yeeX]. 8 102 25.672 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CI104_RS16290 c6c5d0bbdcf5c0b15a9cbb6f2d39f59c 111 ProDom PD030876 UPF0265 YEEX HELIX ALPHA BFL460 UNCHARACTERIZED FN0411 HI1168 VPA1226 BCR 11 98 5.0E-43 T 28-03-2018 IPR007458 Protein of unknown function DUF496 CI104_RS15015 32ae0073a9e4164f106f030b3cbb9c8c 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 10 107 1.3E-27 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS15015 32ae0073a9e4164f106f030b3cbb9c8c 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 32 210 6.8E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS15015 32ae0073a9e4164f106f030b3cbb9c8c 228 SUPERFAMILY SSF161098 12 208 4.19E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS15015 32ae0073a9e4164f106f030b3cbb9c8c 228 Gene3D G3DSA:1.10.3720.10 2 217 7.4E-32 T 28-03-2018 CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 Pfam PF00005 ABC transporter 22 173 5.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 SMART SM00382 30 223 3.8E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 SUPERFAMILY SSF52540 3 248 6.63E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 PIRSF PIRSF037116 1 252 1.0E-139 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 Gene3D G3DSA:3.40.50.300 2 252 1.2E-62 T 28-03-2018 CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23105 d32637548e420d40cb02c10cac0454ab 252 TIGRFAM TIGR02323 CP_lyasePhnK: phosphonate C-P lyase system protein PhnK 3 250 4.5E-123 T 28-03-2018 IPR012700 Phosphonate C-P lyase system, PhnK CI104_RS12860 c49b1118e1cbc905ceabb0547f46db81 395 Gene3D G3DSA:1.20.1250.20 1 193 1.5E-26 T 28-03-2018 CI104_RS12860 c49b1118e1cbc905ceabb0547f46db81 395 Pfam PF07690 Major Facilitator Superfamily 13 341 9.8E-26 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS12860 c49b1118e1cbc905ceabb0547f46db81 395 Gene3D G3DSA:1.20.1250.20 194 386 3.0E-9 T 28-03-2018 CI104_RS12860 c49b1118e1cbc905ceabb0547f46db81 395 SUPERFAMILY SSF103473 6 384 2.49E-44 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS15025 9b86a06c94537184da4a64e314432dba 265 Gene3D G3DSA:3.40.190.10 158 265 1.6E-11 T 28-03-2018 CI104_RS15025 9b86a06c94537184da4a64e314432dba 265 SUPERFAMILY SSF53850 5 257 2.59E-56 T 28-03-2018 CI104_RS15025 9b86a06c94537184da4a64e314432dba 265 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 36 254 1.1E-46 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS15025 9b86a06c94537184da4a64e314432dba 265 SMART SM00062 35 256 1.6E-42 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS15025 9b86a06c94537184da4a64e314432dba 265 Gene3D G3DSA:3.40.190.10 19 157 2.8E-30 T 28-03-2018 CI104_RS20495 479377e7a6e598bebd955a0729361da0 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 86 4.4E-20 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CI104_RS08280 b13ef127589ad08dfface35882b60654 251 Hamap MF_00835 Malonyl-[acyl-carrier protein] O-methyltransferase [bioC]. 4 250 29.651 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CI104_RS08280 b13ef127589ad08dfface35882b60654 251 Pfam PF08241 Methyltransferase domain 47 138 3.1E-25 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CI104_RS08280 b13ef127589ad08dfface35882b60654 251 Gene3D G3DSA:3.40.50.150 4 214 5.2E-37 T 28-03-2018 CI104_RS08280 b13ef127589ad08dfface35882b60654 251 SUPERFAMILY SSF53335 10 185 1.08E-41 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS08280 b13ef127589ad08dfface35882b60654 251 TIGRFAM TIGR02072 BioC: malonyl-acyl carrier protein O-methyltransferase BioC 12 249 8.5E-68 T 28-03-2018 IPR011814 Malonyl-[acyl-carrier protein] O-methyltransferase BioC GO:0009102|GO:0010340 KEGG: 00670+2.1.1.19|KEGG: 00780+2.1.1.197|MetaCyc: PWY-2201|MetaCyc: PWY-6519 CI104_RS27260 ee229eda1207768465bc1e93ba069c01 317 Pfam PF01548 Transposase 7 147 8.9E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS27230 ee229eda1207768465bc1e93ba069c01 317 Pfam PF01548 Transposase 7 147 8.9E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS18790 97c0e2b4480333264fd7b16f9cbbd6c9 86 SUPERFAMILY SSF54862 5 72 9.54E-18 T 28-03-2018 CI104_RS18790 97c0e2b4480333264fd7b16f9cbbd6c9 86 Pfam PF12838 4Fe-4S dicluster domain 8 55 3.3E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS18790 97c0e2b4480333264fd7b16f9cbbd6c9 86 Gene3D G3DSA:3.30.70.20 2 84 5.7E-16 T 28-03-2018 CI104_RS18790 97c0e2b4480333264fd7b16f9cbbd6c9 86 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 9 20 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS20205 46d3c8e9e05a82d7afd10eb3afc74dd8 153 Gene3D G3DSA:1.10.10.10 28 132 1.3E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20205 46d3c8e9e05a82d7afd10eb3afc74dd8 153 SMART SM00862 47 125 2.2E-5 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20205 46d3c8e9e05a82d7afd10eb3afc74dd8 153 Pfam PF00486 Transcriptional regulatory protein, C terminal 50 125 3.0E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS20205 46d3c8e9e05a82d7afd10eb3afc74dd8 153 SUPERFAMILY SSF46894 35 126 4.54E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS01580 c96999f07f0c57dc1f8b3851bfaaf1c1 571 Pfam PF00920 Dehydratase family 33 568 6.3E-172 T 28-03-2018 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS01580 c96999f07f0c57dc1f8b3851bfaaf1c1 571 ProSitePatterns PS00887 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 2. 469 480 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS01580 c96999f07f0c57dc1f8b3851bfaaf1c1 571 SUPERFAMILY SSF143975 10 378 8.76E-111 T 28-03-2018 CI104_RS01580 c96999f07f0c57dc1f8b3851bfaaf1c1 571 SUPERFAMILY SSF52016 382 570 6.36E-53 T 28-03-2018 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CI104_RS01580 c96999f07f0c57dc1f8b3851bfaaf1c1 571 ProSitePatterns PS00886 Dihydroxy-acid and 6-phosphogluconate dehydratases signature 1. 119 129 - T 28-03-2018 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site GO:0003824|GO:0008152 KEGG: 00290+4.2.1.9|KEGG: 00770+4.2.1.9|MetaCyc: PWY-5101|MetaCyc: PWY-5103|MetaCyc: PWY-5104|MetaCyc: PWY-7111 CI104_RS07145 04e6fe0894073ada3c23beb3789c7c3f 217 SUPERFAMILY SSF55469 1 216 1.26E-64 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS07145 04e6fe0894073ada3c23beb3789c7c3f 217 Gene3D G3DSA:3.40.109.10 1 217 1.4E-39 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS07145 04e6fe0894073ada3c23beb3789c7c3f 217 Pfam PF00881 Nitroreductase family 8 193 3.1E-33 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CI104_RS22295 5786bf34d168169769e4a59e6c793ebc 577 Pfam PF17243 POTRA domain TamA domain 1 26 100 2.1E-21 T 28-03-2018 IPR035243 TamA, POTRA domain 1 CI104_RS22295 5786bf34d168169769e4a59e6c793ebc 577 Gene3D G3DSA:2.40.160.50 220 576 2.8E-60 T 28-03-2018 CI104_RS22295 5786bf34d168169769e4a59e6c793ebc 577 Gene3D G3DSA:3.10.20.310 103 188 5.7E-11 T 28-03-2018 CI104_RS22295 5786bf34d168169769e4a59e6c793ebc 577 Gene3D G3DSA:3.10.20.310 24 102 0.4 T 28-03-2018 CI104_RS22295 5786bf34d168169769e4a59e6c793ebc 577 Pfam PF01103 Surface antigen 282 574 9.7E-31 T 28-03-2018 IPR000184 Bacterial surface antigen (D15) GO:0019867 Reactome: R-HSA-1268020|Reactome: R-HSA-8949613 CI104_RS22295 5786bf34d168169769e4a59e6c793ebc 577 Pfam PF07244 Surface antigen variable number repeat 189 246 1.0E-7 T 28-03-2018 IPR010827 POTRA domain, BamA/TamA-like GO:0019867 CI104_RS11070 5153c1db6170a7e3859dc307eb05ad9e 292 TIGRFAM TIGR01712 phage_N6A_met: phage N-6-adenine-methyltransferase 15 195 1.4E-61 T 28-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CI104_RS11070 5153c1db6170a7e3859dc307eb05ad9e 292 Pfam PF05869 DNA N-6-adenine-methyltransferase (Dam) 17 201 1.7E-58 T 28-03-2018 IPR008593 DNA N-6-adenine-methyltransferase GO:0003677|GO:0009007|GO:0032775 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 SUPERFAMILY SSF52540 7 642 2.89E-182 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 Pfam PF13361 UvrD-like helicase C-terminal domain 277 616 1.3E-75 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 Gene3D G3DSA:3.40.50.300 283 384 1.3E-25 T 28-03-2018 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 Pfam PF00580 UvrD/REP helicase N-terminal domain 10 271 1.7E-75 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 Gene3D G3DSA:3.40.50.300 5 146 2.6E-27 T 28-03-2018 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 Gene3D G3DSA:3.40.50.300 149 282 8.6E-33 T 28-03-2018 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 TIGRFAM TIGR01075 uvrD: DNA helicase II 6 718 0.0 T 28-03-2018 IPR005753 DNA helicase, ATP-dependent, UvrD type GO:0004003|GO:0005737|GO:0006268 CI104_RS24785 9bc3d10a0e21f17cb6b9674484743ce7 720 Gene3D G3DSA:3.40.50.300 385 661 1.6E-52 T 28-03-2018 CI104_RS13500 4df9644c31d8b44992d0f23c507af009 92 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 60 5.7E-12 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS13500 4df9644c31d8b44992d0f23c507af009 92 Gene3D G3DSA:3.40.50.2300 1 91 2.6E-20 T 28-03-2018 CI104_RS13500 4df9644c31d8b44992d0f23c507af009 92 SUPERFAMILY SSF52794 1 89 9.68E-19 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS22710 69ea3bdee76bee6c517af5879b5c4d33 433 PIRSF PIRSF004539 1 433 7.3E-180 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS22710 69ea3bdee76bee6c517af5879b5c4d33 433 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 5 433 1.0E-205 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS22710 69ea3bdee76bee6c517af5879b5c4d33 433 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 365 6.4E-145 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS21850 9b3ce355689c80f2260956d06e388c51 130 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 4 123 1.6E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS21850 9b3ce355689c80f2260956d06e388c51 130 SUPERFAMILY SSF54593 2 127 1.16E-21 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS21850 9b3ce355689c80f2260956d06e388c51 130 Gene3D G3DSA:3.10.180.10 1 130 5.6E-19 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 236 300 1.9E-16 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 Pfam PF00005 ABC transporter 25 184 1.6E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 Gene3D G3DSA:3.40.50.300 2 327 4.2E-70 T 28-03-2018 CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 235 320 6.8E-22 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 ProSitePatterns PS00211 ABC transporters family signature. 157 171 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 SUPERFAMILY SSF52540 5 253 8.38E-60 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13095 fd879faaa38b01bf8ffc90945e27aea3 328 SMART SM00382 34 234 1.2E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS04185 cdb60fd9ad08885ae18a659ac8706732 96 SMART SM01152 7 83 9.3E-37 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CI104_RS04185 cdb60fd9ad08885ae18a659ac8706732 96 SUPERFAMILY SSF69786 3 93 2.22E-31 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CI104_RS04185 cdb60fd9ad08885ae18a659ac8706732 96 Pfam PF02594 Uncharacterised ACR, YggU family COG1872 10 81 1.5E-25 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CI104_RS04185 cdb60fd9ad08885ae18a659ac8706732 96 TIGRFAM TIGR00251 TIGR00251: TIGR00251 family protein 4 91 9.7E-33 T 28-03-2018 IPR005228 Conserved hypothetical protein CHP00251 CI104_RS04185 cdb60fd9ad08885ae18a659ac8706732 96 Hamap MF_00634 UPF0235 protein YggU [yggU]. 7 93 20.064 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CI104_RS04185 cdb60fd9ad08885ae18a659ac8706732 96 Gene3D G3DSA:3.30.1200.10 1 96 6.6E-31 T 28-03-2018 IPR003746 Protein of unknown function DUF167 CI104_RS17065 e3caed6b57454cc663bbca098dc126c7 94 Hamap MF_01336 50S ribosomal protein L25 [rplY]. 2 94 28.024 T 28-03-2018 IPR020055 Ribosomal protein L25, short-form GO:0003735|GO:0005840|GO:0006412|GO:0008097 CI104_RS17065 e3caed6b57454cc663bbca098dc126c7 94 Gene3D G3DSA:2.40.240.10 1 94 7.5E-31 T 28-03-2018 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS17065 e3caed6b57454cc663bbca098dc126c7 94 ProDom PD012503 RIBOSOMAL L25 50S RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN STRESS GENERAL CTC RRNA 6 93 9.0E-42 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CI104_RS17065 e3caed6b57454cc663bbca098dc126c7 94 Pfam PF01386 Ribosomal L25p family 4 91 6.8E-24 T 28-03-2018 IPR029751 Ribosomal protein L25 GO:0003735|GO:0005840|GO:0006412|GO:0008097 CI104_RS17065 e3caed6b57454cc663bbca098dc126c7 94 SUPERFAMILY SSF50715 1 93 9.59E-31 T 28-03-2018 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain GO:0006412 Reactome: R-HSA-2408517|Reactome: R-HSA-379716 CI104_RS18255 b9debb6ae87ab8521dcd709bc809981a 408 PIRSF PIRSF019466 1 407 3.7E-128 T 28-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CI104_RS18255 b9debb6ae87ab8521dcd709bc809981a 408 Pfam PF04346 Ethanolamine utilisation protein, EutH 3 391 2.6E-140 T 28-03-2018 IPR007441 Ethanolamine utilisation protein EutH GO:0016021|GO:0034228|GO:0034229 CI104_RS26345 cc201335e8350d47bdf89da1b8154bf6 48 Pfam PF10617 Protein of unknown function (DUF2474) 10 47 2.8E-20 T 28-03-2018 IPR018895 Protein of unknown function DUF2474 CI104_RS00605 b556afe60add467ee23ebd289b327aef 348 Gene3D G3DSA:3.40.50.2000 163 348 1.3E-43 T 28-03-2018 CI104_RS00605 b556afe60add467ee23ebd289b327aef 348 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 69 324 9.3E-88 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CI104_RS00605 b556afe60add467ee23ebd289b327aef 348 TIGRFAM TIGR02195 heptsyl_trn_II: lipopolysaccharide heptosyltransferase II 2 343 4.6E-169 T 28-03-2018 IPR011910 ADP-heptose--LPS heptosyltransferase 2 GO:0009103|GO:0016757 CI104_RS00605 b556afe60add467ee23ebd289b327aef 348 Gene3D G3DSA:3.40.50.2000 1 151 6.8E-34 T 28-03-2018 CI104_RS00605 b556afe60add467ee23ebd289b327aef 348 SUPERFAMILY SSF53756 1 343 3.24E-100 T 28-03-2018 CI104_RS05115 0551f40530e4402f73c284897cdfb624 178 SUPERFAMILY SSF53271 2 174 7.21E-53 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS05115 0551f40530e4402f73c284897cdfb624 178 Pfam PF00156 Phosphoribosyl transferase domain 13 160 1.7E-23 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CI104_RS05115 0551f40530e4402f73c284897cdfb624 178 Gene3D G3DSA:3.40.50.2020 2 175 9.7E-41 T 28-03-2018 CI104_RS05115 0551f40530e4402f73c284897cdfb624 178 TIGRFAM TIGR01203 HGPRTase: hypoxanthine phosphoribosyltransferase 7 173 6.1E-74 T 28-03-2018 IPR005904 Hypoxanthine phosphoribosyl transferase GO:0004422|GO:0005737|GO:0006166 KEGG: 00230+2.4.2.8|KEGG: 00983+2.4.2.8|MetaCyc: PWY-6599|MetaCyc: PWY-6609|MetaCyc: PWY-6610|MetaCyc: PWY-6620 CI104_RS08560 fa4c6194fb86b0d9b7e3131b14763981 252 Gene3D G3DSA:3.40.50.720 1 249 1.0E-75 T 28-03-2018 CI104_RS08560 fa4c6194fb86b0d9b7e3131b14763981 252 Pfam PF00899 ThiF family 12 244 1.0E-61 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CI104_RS08560 fa4c6194fb86b0d9b7e3131b14763981 252 SUPERFAMILY SSF69572 3 248 2.09E-85 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CI104_RS08560 fa4c6194fb86b0d9b7e3131b14763981 252 TIGRFAM TIGR02355 moeB: molybdopterin synthase sulfurylase MoeB 8 247 2.7E-131 T 28-03-2018 IPR012730 Molybdopterin synthase sulfurylase MoeB GO:0006777 MetaCyc: PWY-6823 CI104_RS13530 0919267eeebad2f831557b7cc1334793 74 Pfam PF04325 Protein of unknown function (DUF465) 19 66 8.1E-15 T 28-03-2018 IPR007420 Protein of unknown function DUF465 CI104_RS24880 bb96379a9b38103c5c956146d85275ad 359 Gene3D G3DSA:3.40.50.2000 178 336 2.5E-5 T 28-03-2018 CI104_RS24880 bb96379a9b38103c5c956146d85275ad 359 Hamap MF_01002 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase [wecF]. 1 359 65.002 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CI104_RS24880 bb96379a9b38103c5c956146d85275ad 359 Pfam PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 1 355 2.7E-180 T 28-03-2018 IPR009993 TDP-N-acetylfucosamine:lipid II N-acetylfucosaminyltransferase GO:0008417|GO:0009246|GO:0036065 CI104_RS27730 7ba2e324af55ea8c3271661098ab4b43 115 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 1 112 5.5E-48 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CI104_RS27730 7ba2e324af55ea8c3271661098ab4b43 115 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 9 111 6.8E-37 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CI104_RS16200 fe0bc0b99ada30967f2028e5557c80b0 222 Pfam PF02288 Dehydratase medium subunit 67 179 1.4E-34 T 28-03-2018 IPR003208 Diol/glycerol dehydratase/dehydratase reactivating factor CI104_RS16200 fe0bc0b99ada30967f2028e5557c80b0 222 SUPERFAMILY SSF52968 45 222 3.66E-72 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CI104_RS16200 fe0bc0b99ada30967f2028e5557c80b0 222 PIRSF PIRSF018506 1 222 7.3E-110 T 28-03-2018 IPR025541 Propanediol/glycerol dehydratase, medium subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CI104_RS16200 fe0bc0b99ada30967f2028e5557c80b0 222 Gene3D G3DSA:3.40.50.10150 48 219 5.1E-77 T 28-03-2018 IPR010254 B12-dependent dehydratases, beta subunit CI104_RS28105 53ed1878a36c1c1d442c616d15eff4d0 142 Pfam PF03230 Antirestriction protein 46 142 2.1E-28 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS28105 53ed1878a36c1c1d442c616d15eff4d0 142 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 44 142 2.0E-46 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 Gene3D G3DSA:3.30.160.20 149 226 1.3E-20 T 28-03-2018 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 SUPERFAMILY SSF54768 109 223 4.24E-27 T 28-03-2018 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 ProSitePatterns PS00517 Ribonuclease III family signature. 38 46 - T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 Pfam PF14622 Ribonuclease-III-like 20 141 1.2E-33 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 Pfam PF00035 Double-stranded RNA binding motif 156 223 3.5E-14 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 Hamap MF_00104 Ribonuclease 3 [rnc]. 9 220 29.49 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 SMART SM00535 21 149 1.6E-59 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 TIGRFAM TIGR02191 RNaseIII: ribonuclease III 9 223 3.1E-74 T 28-03-2018 IPR011907 Ribonuclease III GO:0003723|GO:0004525|GO:0016075 Reactome: R-HSA-203927 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 Gene3D G3DSA:1.10.1520.10 5 148 2.6E-44 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 SUPERFAMILY SSF69065 5 159 5.06E-50 T 28-03-2018 IPR000999 Ribonuclease III domain GO:0004525|GO:0006396 CI104_RS18815 8ef4b528746ca44202bc6043d0278778 226 SMART SM00358 156 224 4.3E-23 T 28-03-2018 IPR014720 Double-stranded RNA-binding domain CI104_RS28580 db8132d17d50da563810caca2c5937dc 394 Pfam PF01609 Transposase DDE domain 106 339 1.4E-20 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CI104_RS28580 db8132d17d50da563810caca2c5937dc 394 Gene3D G3DSA:3.90.350.10 95 308 0.0011 T 28-03-2018 IPR014736 Transposase, Tn5-like, core CI104_RS28580 db8132d17d50da563810caca2c5937dc 394 Pfam PF13808 DDE_Tnp_1-associated 9 95 5.9E-28 T 28-03-2018 IPR032806 H repeat-associated protein, N-terminal CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 SUPERFAMILY SSF46689 59 108 1.73E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 Gene3D G3DSA:1.10.10.60 60 113 6.6E-14 T 28-03-2018 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 89 105 2.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 74 89 2.8E-5 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 59 101 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 SMART SM00342 22 105 2.0E-34 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 Pfam PF12833 Helix-turn-helix domain 28 106 8.2E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 Gene3D G3DSA:1.10.10.60 2 59 1.1E-14 T 28-03-2018 CI104_RS07165 e00f5843dfeca80a25ab46240dfdd199 113 SUPERFAMILY SSF46689 6 56 3.14E-11 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS09565 5a419a16559fa6db2973b6ca06fd71e5 382 Gene3D G3DSA:1.20.120.20 10 362 0.0013 T 28-03-2018 CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 TIGRFAM TIGR00916 2A0604s01: protein-export membrane protein, SecD/SecF family 126 289 6.8E-54 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 SUPERFAMILY SSF82866 83 303 3.14E-38 T 28-03-2018 CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 Hamap MF_01464_B Protein-export membrane protein SecF [secF]. 17 303 27.892 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 PRINTS PR01755 Bacterial translocase SecF protein signature 160 174 1.5E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 PRINTS PR01755 Bacterial translocase SecF protein signature 44 59 1.5E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 PRINTS PR01755 Bacterial translocase SecF protein signature 208 226 1.5E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 PRINTS PR01755 Bacterial translocase SecF protein signature 240 255 1.5E-30 T 28-03-2018 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 TIGRFAM TIGR00966 3a0501s07: protein-export membrane protein SecF 45 292 2.7E-86 T 28-03-2018 IPR005665 Protein-export membrane protein SecF, bacterial GO:0006886|GO:0015450 CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 Pfam PF02355 Protein export membrane protein 118 301 2.3E-69 T 28-03-2018 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 Gene3D G3DSA:1.20.1640.10 107 313 4.2E-31 T 28-03-2018 CI104_RS06240 386c49bf49a942d958f29e7915e73d66 323 Pfam PF07549 SecD/SecF GG Motif 40 66 2.0E-11 T 28-03-2018 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CI104_RS11630 8b2e456f71a3f634410a2c682de08e6e 137 Gene3D G3DSA:2.170.150.20 1 137 1.4E-58 T 28-03-2018 CI104_RS11630 8b2e456f71a3f634410a2c682de08e6e 137 Pfam PF01641 SelR domain 10 127 3.6E-54 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CI104_RS11630 8b2e456f71a3f634410a2c682de08e6e 137 Hamap MF_01400 Peptide methionine sulfoxide reductase MsrB [msrB]. 3 129 38.542 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CI104_RS11630 8b2e456f71a3f634410a2c682de08e6e 137 TIGRFAM TIGR00357 TIGR00357: methionine-R-sulfoxide reductase 4 134 1.6E-65 T 28-03-2018 IPR002579 Peptide methionine sulphoxide reductase MrsB GO:0033743|GO:0055114 Reactome: R-HSA-5676934 CI104_RS11630 8b2e456f71a3f634410a2c682de08e6e 137 SUPERFAMILY SSF51316 5 132 5.58E-59 T 28-03-2018 IPR011057 Mss4-like CI104_RS16300 ef886166b99f303bd9cc1a3a1d6933f1 157 SMART SM00871 1 153 5.2E-24 T 28-03-2018 IPR010499 Bacterial transcription activator, effector binding CI104_RS16300 ef886166b99f303bd9cc1a3a1d6933f1 157 SUPERFAMILY SSF55136 1 154 2.09E-37 T 28-03-2018 CI104_RS16300 ef886166b99f303bd9cc1a3a1d6933f1 157 Gene3D G3DSA:3.20.80.10 1 157 4.4E-24 T 28-03-2018 IPR011256 Regulatory factor, effector binding domain CI104_RS16300 ef886166b99f303bd9cc1a3a1d6933f1 157 Hamap MF_01896 DNA gyrase inhibitor [sbmC]. 1 155 38.612 T 28-03-2018 IPR024911 DNA gyrase inhibitor GyrI GO:0008657 CI104_RS16300 ef886166b99f303bd9cc1a3a1d6933f1 157 Pfam PF06445 GyrI-like small molecule binding domain 1 152 2.9E-23 T 28-03-2018 IPR029442 GyrI-like small molecule binding domain CI104_RS20895 e7ff8c27eee5ffdc6bbcc8d5857a84b3 159 SUPERFAMILY SSF47741 89 157 2.22E-22 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CI104_RS20895 e7ff8c27eee5ffdc6bbcc8d5857a84b3 159 Gene3D G3DSA:3.10.20.30 4 79 1.8E-19 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS20895 e7ff8c27eee5ffdc6bbcc8d5857a84b3 159 Pfam PF01799 [2Fe-2S] binding domain 78 152 4.6E-23 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CI104_RS20895 e7ff8c27eee5ffdc6bbcc8d5857a84b3 159 Gene3D G3DSA:1.10.150.120 80 159 3.2E-25 T 28-03-2018 IPR002888 [2Fe-2S]-binding GO:0016491|GO:0046872|GO:0055114 CI104_RS20895 e7ff8c27eee5ffdc6bbcc8d5857a84b3 159 SUPERFAMILY SSF54292 8 81 2.49E-18 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS20895 e7ff8c27eee5ffdc6bbcc8d5857a84b3 159 Pfam PF00111 2Fe-2S iron-sulfur cluster binding domain 13 59 5.8E-6 T 28-03-2018 IPR001041 2Fe-2S ferredoxin-type iron-sulfur binding domain GO:0009055|GO:0051536 CI104_RS00765 e730d59fbd898712771ae0583f885d27 108 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 1.6E-41 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CI104_RS00765 e730d59fbd898712771ae0583f885d27 108 PIRSF PIRSF028770 1 107 1.0E-57 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CI104_RS15060 033d16d2255c8e090f89274408add715 375 SMART SM00341 210 289 5.0E-22 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CI104_RS15060 033d16d2255c8e090f89274408add715 375 Gene3D G3DSA:3.30.420.10 1 194 4.2E-42 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS15060 033d16d2255c8e090f89274408add715 375 Hamap MF_01899 Ribonuclease D [rnd]. 3 371 45.259 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CI104_RS15060 033d16d2255c8e090f89274408add715 375 SUPERFAMILY SSF47819 295 371 7.85E-23 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CI104_RS15060 033d16d2255c8e090f89274408add715 375 SUPERFAMILY SSF47819 195 301 6.21E-30 T 28-03-2018 IPR010997 HRDC-like GO:0000166|GO:0003824|GO:0044237 CI104_RS15060 033d16d2255c8e090f89274408add715 375 Pfam PF01612 3'-5' exonuclease 3 170 5.3E-46 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CI104_RS15060 033d16d2255c8e090f89274408add715 375 Pfam PF00570 HRDC domain 213 279 2.0E-14 T 28-03-2018 IPR002121 HRDC domain GO:0003676|GO:0005622 CI104_RS15060 033d16d2255c8e090f89274408add715 375 SMART SM00474 3 171 2.0E-54 T 28-03-2018 IPR002562 3'-5' exonuclease domain GO:0003676|GO:0006139|GO:0008408 CI104_RS15060 033d16d2255c8e090f89274408add715 375 TIGRFAM TIGR01388 rnd: ribonuclease D 5 371 1.9E-156 T 28-03-2018 IPR006292 Ribonuclease D GO:0008033|GO:0008408|GO:0033890 CI104_RS15060 033d16d2255c8e090f89274408add715 375 SUPERFAMILY SSF53098 2 210 2.93E-67 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS15060 033d16d2255c8e090f89274408add715 375 Gene3D G3DSA:1.10.150.80 195 293 9.0E-23 T 28-03-2018 CI104_RS19475 e83731b01b7977a8c7c443f06b6e3db8 497 SUPERFAMILY SSF53474 126 353 1.03E-24 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS19475 e83731b01b7977a8c7c443f06b6e3db8 497 Pfam PF12146 Serine aminopeptidase, S33 129 286 2.1E-11 T 28-03-2018 IPR022742 Serine aminopeptidase, S33 CI104_RS19475 e83731b01b7977a8c7c443f06b6e3db8 497 Gene3D G3DSA:3.40.50.1820 53 393 2.7E-23 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS11725 a26f9246459062264b23786af779e979 447 SUPERFAMILY SSF51735 202 446 1.08E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11725 a26f9246459062264b23786af779e979 447 Gene3D G3DSA:1.10.285.10 6 61 1.5E-8 T 28-03-2018 CI104_RS11725 a26f9246459062264b23786af779e979 447 Gene3D G3DSA:1.10.285.10 374 447 1.5E-24 T 28-03-2018 CI104_RS11725 a26f9246459062264b23786af779e979 447 SUPERFAMILY SSF53223 7 196 1.34E-73 T 28-03-2018 CI104_RS11725 a26f9246459062264b23786af779e979 447 Pfam PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain 57 183 3.3E-49 T 28-03-2018 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 PIRSF PIRSF000185 22 447 7.0E-116 T 28-03-2018 IPR014362 Glutamate dehydrogenase GO:0016639|GO:0055114 CI104_RS11725 a26f9246459062264b23786af779e979 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 114 128 3.3E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 235 255 3.3E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 372 383 3.3E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 PRINTS PR00082 Glutamate/leucine/phenylalanine/valine dehydrogenase signature 193 215 3.3E-33 T 28-03-2018 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 ProSitePatterns PS00074 Glu / Leu / Phe / Val dehydrogenases active site. 122 135 - T 28-03-2018 IPR033524 Leu/Phe/Val dehydrogenases active site Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 Gene3D G3DSA:3.40.50.10860 62 190 3.1E-54 T 28-03-2018 CI104_RS11725 a26f9246459062264b23786af779e979 447 Gene3D G3DSA:3.40.50.720 209 373 3.0E-46 T 28-03-2018 CI104_RS11725 a26f9246459062264b23786af779e979 447 Pfam PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase 202 445 1.3E-86 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS11725 a26f9246459062264b23786af779e979 447 SMART SM00839 204 445 1.4E-94 T 28-03-2018 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal GO:0006520|GO:0016491|GO:0055114 Reactome: R-HSA-2151201|Reactome: R-HSA-70614 CI104_RS14930 e7b3861e46b5f22c6f2d70f7edbe225f 175 Pfam PF07352 Bacteriophage Mu Gam like protein 22 167 9.1E-38 T 28-03-2018 IPR009951 Host-nuclease inhibitor protein Gam GO:0003690|GO:0042262 CI104_RS14930 e7b3861e46b5f22c6f2d70f7edbe225f 175 SUPERFAMILY SSF161266 17 168 6.28E-40 T 28-03-2018 CI104_RS14930 e7b3861e46b5f22c6f2d70f7edbe225f 175 Gene3D G3DSA:1.20.5.170 3 85 6.6E-14 T 28-03-2018 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 ProSitePatterns PS00783 Ribosomal protein L13 signature. 105 127 - T 28-03-2018 IPR023563 Ribosomal protein L13, conserved site GO:0003735|GO:0005840|GO:0006412 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 Gene3D G3DSA:3.90.1180.10 1 142 1.0E-62 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 Pfam PF00572 Ribosomal protein L13 15 138 3.5E-57 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 PIRSF PIRSF002181 1 142 7.1E-51 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 TIGRFAM TIGR01066 rplM_bact: ribosomal protein uL13 4 142 5.5E-68 T 28-03-2018 IPR005823 Ribosomal protein L13, bacterial-type GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 Hamap MF_01366 50S ribosomal protein L13 [rplM]. 15 141 28.522 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CI104_RS02565 955a7e9821201b2d8cc3d0372c239b73 142 SUPERFAMILY SSF52161 1 140 1.7E-60 T 28-03-2018 IPR005822 Ribosomal protein L13 GO:0003735|GO:0005840|GO:0006412 CI104_RS18515 2244b65ebad289bdce92aad6722af2cc 73 SUPERFAMILY SSF161187 1 69 4.18E-29 T 28-03-2018 IPR029037 YfgJ-like CI104_RS18515 2244b65ebad289bdce92aad6722af2cc 73 ProDom PD060428 YFGJ CYTOPLASMIC VP0614 ECS3372 VC0765 YPO2873 Y1359 STY2763A VV0773 1 70 2.0E-26 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 CI104_RS18515 2244b65ebad289bdce92aad6722af2cc 73 Pfam PF07191 zinc-ribbons 4 68 4.8E-29 T 28-03-2018 IPR010807 Protein of unknown function DUF1407 CI104_RS18515 2244b65ebad289bdce92aad6722af2cc 73 Gene3D G3DSA:2.10.290.10 1 71 1.6E-5 T 28-03-2018 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 TIGRFAM TIGR00571 dam: DNA adenine methylase 2 268 6.9E-68 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 Gene3D G3DSA:3.40.50.150 149 269 7.8E-13 T 28-03-2018 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 6 22 4.9E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 175 187 4.9E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 29 43 4.9E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 PRINTS PR00505 D12 class N6 adenine-specific DNA methyltransferase signature 48 61 4.9E-17 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 Gene3D G3DSA:1.10.1020.10 55 148 2.5E-23 T 28-03-2018 IPR023095 Adenine-specific methyltransferase, domain 2 GO:0009007 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 SUPERFAMILY SSF53335 2 267 3.88E-60 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 PIRSF PIRSF000398 1 270 1.0E-66 T 28-03-2018 IPR012263 Adenine modification methylase, M.EcoRV-type GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 Pfam PF02086 D12 class N6 adenine-specific DNA methyltransferase 6 248 1.2E-45 T 28-03-2018 IPR012327 D12 class N6 adenine-specific DNA methyltransferase GO:0009007|GO:0032775 CI104_RS27145 efe5d78a1331d46b0468f032e8500105 270 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 178 184 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 SUPERFAMILY SSF46785 10 121 5.44E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 Gene3D G3DSA:1.10.10.10 6 93 8.7E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 28 39 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 49 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 49 60 1.3E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 Gene3D G3DSA:3.40.190.10 97 187 1.6E-18 T 28-03-2018 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 SUPERFAMILY SSF53850 102 305 1.06E-32 T 28-03-2018 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 13 72 7.2E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 Pfam PF03466 LysR substrate binding domain 101 305 5.3E-34 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS13565 05ab269b6153bae2328273aa391df77e 307 Gene3D G3DSA:3.40.190.10 188 275 7.6E-12 T 28-03-2018 CI104_RS11165 3d3e00f939139626db4117e05ca7ff94 441 SUPERFAMILY SSF52096 73 199 9.94E-31 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS11165 3d3e00f939139626db4117e05ca7ff94 441 SUPERFAMILY SSF52096 230 288 9.94E-31 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS11165 3d3e00f939139626db4117e05ca7ff94 441 Pfam PF01343 Peptidase family S49 152 298 2.8E-38 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CI104_RS11165 3d3e00f939139626db4117e05ca7ff94 441 Gene3D G3DSA:3.90.226.10 77 326 6.8E-26 T 28-03-2018 CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 Hamap MF_01295 D-tagatose-1,6-bisphosphate aldolase subunit KbaZ [kbaZ]. 1 426 83.459 T 28-03-2018 IPR023435 D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit KbaZ CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 Gene3D G3DSA:3.20.20.70 4 294 6.8E-74 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 SUPERFAMILY SSF51569 4 423 1.67E-170 T 28-03-2018 CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 Gene3D G3DSA:1.10.400.20 295 408 1.8E-47 T 28-03-2018 CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 TIGRFAM TIGR02810 agaZ_gatZ: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit 6 424 1.6E-212 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 PIRSF PIRSF009264 1 429 1.1E-206 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CI104_RS03065 6b50999b3705d5d2a9c77dcc5e3bc7cc 431 Pfam PF08013 Tagatose 6 phosphate kinase 4 424 4.4E-202 T 28-03-2018 IPR012062 D-tagatose-bisphosphate aldolase, non-catalytic subunit GatZ/KbaZ GO:0019402 CI104_RS06030 a22794e12dfd56b44bfe944825addff2 364 ProDom PD041438 LIPOPROTEIN YAIW PRECURSOR SIGNAL MEMBRANE OUTER LIPOPROTEIN ECS0428 XAC0592 SECRETED 13 364 0.0 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 CI104_RS06030 a22794e12dfd56b44bfe944825addff2 364 Pfam PF07759 Protein of unknown function (DUF1615) 50 362 5.9E-148 T 28-03-2018 IPR011673 Protein of unknown function DUF1615 CI104_RS21040 08a1e33e9dd916fa9d5f04c31db9cdd7 219 TIGRFAM TIGR01065 hlyIII: channel protein, hemolysin III family 15 216 5.7E-72 T 28-03-2018 IPR005744 Hly-III GO:0016021|GO:0019835 CI104_RS21040 08a1e33e9dd916fa9d5f04c31db9cdd7 219 Pfam PF03006 Haemolysin-III related 12 209 5.3E-38 T 28-03-2018 IPR004254 AdipoR/Haemolysin-III-related GO:0016021 CI104_RS02865 66b68e347f51ca1ee5d15226bbeabdb3 231 Gene3D G3DSA:3.50.30.40 20 196 3.0E-53 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CI104_RS02865 66b68e347f51ca1ee5d15226bbeabdb3 231 SUPERFAMILY SSF89562 25 187 1.57E-44 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CI104_RS02865 66b68e347f51ca1ee5d15226bbeabdb3 231 Pfam PF03737 Aldolase/RraA 27 177 3.2E-43 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CI104_RS09675 43ee6d433ae67ff65fafcc9d54b627d5 446 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 18 443 4.4E-136 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CI104_RS09675 43ee6d433ae67ff65fafcc9d54b627d5 446 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 6 444 6.4E-128 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 ProSitePatterns PS00894 DeoR-type HTH domain signature. 6 40 - T 28-03-2018 IPR018356 Transcription regulator, HTH DeoR-type, conserved site GO:0003700|GO:0006355 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 SMART SM00420 6 58 2.7E-14 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 SMART SM01134 71 232 2.2E-55 T 28-03-2018 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 Pfam PF00455 DeoR C terminal sensor domain 74 230 2.8E-41 T 28-03-2018 IPR014036 DeoR C-terminal sensor domain CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 Gene3D G3DSA:3.40.50.1360 73 242 1.3E-35 T 28-03-2018 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 Pfam PF08220 DeoR-like helix-turn-helix domain 6 57 2.6E-15 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 SUPERFAMILY SSF100950 74 230 1.67E-25 T 28-03-2018 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 24 38 6.8E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 PRINTS PR00037 LacR bacterial regulatory protein HTH signature 38 56 6.8E-9 T 28-03-2018 IPR001034 DeoR-type HTH domain GO:0003700|GO:0005622|GO:0006355 CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 SUPERFAMILY SSF46785 4 59 1.48E-12 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13265 1c61d5b7492f3c5f543419f27fd2d4e1 251 Gene3D G3DSA:1.10.10.10 1 72 2.6E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09770 bf0cf84060469c9900b9f3a4ffc593b5 361 Pfam PF06996 Type VI secretion, TssG 20 320 2.3E-72 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CI104_RS09770 bf0cf84060469c9900b9f3a4ffc593b5 361 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 20 320 2.8E-67 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 TIGRFAM TIGR00656 asp_kin_monofn: aspartate kinase, monofunctional class 3 449 2.4E-149 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 SUPERFAMILY SSF55021 372 448 1.89E-13 T 28-03-2018 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 Gene3D G3DSA:3.30.70.260 372 449 2.1E-14 T 28-03-2018 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 Gene3D G3DSA:3.40.1160.10 1 283 8.7E-63 T 28-03-2018 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 TIGRFAM TIGR00657 asp_kinases: aspartate kinase 3 449 7.0E-139 T 28-03-2018 IPR001341 Aspartate kinase domain GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 SUPERFAMILY SSF55021 297 393 1.83E-16 T 28-03-2018 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 SUPERFAMILY SSF53633 4 292 1.96E-75 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 ProSitePatterns PS00324 Aspartokinase signature. 6 14 - T 28-03-2018 IPR018042 Aspartate kinase, conserved site GO:0004072|GO:0008652 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 Pfam PF00696 Amino acid kinase family 4 277 6.1E-48 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 PIRSF PIRSF000726 2 449 7.6E-163 T 28-03-2018 IPR005260 Aspartate kinase, monofunctional class GO:0004072|GO:0009089 KEGG: 00260+2.7.2.4|KEGG: 00261+2.7.2.4|KEGG: 00270+2.7.2.4|KEGG: 00300+2.7.2.4|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|MetaCyc: PWY-6559|MetaCyc: PWY-6562|MetaCyc: PWY-7153 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 Gene3D G3DSA:3.30.70.260 284 361 6.3E-20 T 28-03-2018 CI104_RS23470 1ad316588b0845ba5fdefab917bba305 449 Pfam PF01842 ACT domain 323 378 2.2E-6 T 28-03-2018 IPR002912 ACT domain CI104_RS13665 969d0c669a7c1e08e90ebd162eddd67f 879 Pfam PF11739 Dicarboxylate transport 657 858 1.7E-61 T 28-03-2018 IPR021730 Dicarboxylate transport CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 SUPERFAMILY SSF102114 102 324 2.75E-27 T 28-03-2018 CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 TIGRFAM TIGR03821 EFP_modif_epmB: EF-P beta-lysylation protein EpmB 15 335 1.6E-158 T 28-03-2018 IPR022462 Lysine-2,3-aminomutase-like CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 Gene3D G3DSA:3.20.20.70 101 329 3.7E-21 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 TIGRFAM TIGR00238 TIGR00238: KamA family protein 3 328 4.8E-150 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 Pfam PF04055 Radical SAM superfamily 118 263 5.7E-8 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 Pfam PF13353 4Fe-4S single cluster domain 112 181 5.1E-6 T 28-03-2018 CI104_RS22665 f848688caea9550f2afb9eaeb7dfe8c5 342 PIRSF PIRSF004911 1 342 7.3E-124 T 28-03-2018 IPR003739 Lysine-2,3-aminomutase/glutamate 2,3-aminomutase CI104_RS25915 4d66a159f4c3443223e0cffd46079186 52 ProDom PD005979 PLASMID MEMBRANE TRANSMEMBRANE POST-SEGREGATION KILLING INHERITANCE ALTERING PERMEABILITY STABLE MAINTENANCE 3 50 4.0E-13 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS25915 4d66a159f4c3443223e0cffd46079186 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 7 25 2.5E-16 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS25915 4d66a159f4c3443223e0cffd46079186 52 PRINTS PR00281 Hok/Gef cell toxic protein family signature 27 49 2.5E-16 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS25915 4d66a159f4c3443223e0cffd46079186 52 Pfam PF01848 Hok/gef family 8 48 1.7E-18 T 28-03-2018 IPR000021 Hok/gef cell toxic protein GO:0016020 CI104_RS25915 4d66a159f4c3443223e0cffd46079186 52 ProSitePatterns PS00556 Hok/gef family cell toxic proteins signature. 12 31 - T 28-03-2018 IPR018084 Hok/gef cell toxic protein, conserved site GO:0016020 CI104_RS02980 549961c5a44299d14344546d94cc1f17 345 Pfam PF03773 Predicted permease 74 342 2.4E-27 T 28-03-2018 IPR005524 Predicted permease DUF318 CI104_RS02980 549961c5a44299d14344546d94cc1f17 345 Pfam PF03773 Predicted permease 59 151 1.4E-11 T 28-03-2018 IPR005524 Predicted permease DUF318 CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 9 91 2.7E-23 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 Pfam PF00589 Phage integrase family 113 280 1.3E-52 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 Hamap MF_01808 Tyrosine recombinase XerC [xerC]. 6 294 58.071 T 28-03-2018 IPR023009 Tyrosine recombinase XerC/XerD CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 TIGRFAM TIGR02224 recomb_XerC: tyrosine recombinase XerC 10 296 4.9E-109 T 28-03-2018 IPR011931 Tyrosine recombinase XerC GO:0003677|GO:0006310|GO:0007049|GO:0007059|GO:0015074|GO:0051301 CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 Gene3D G3DSA:1.10.443.10 114 288 1.7E-43 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 Gene3D G3DSA:1.10.150.130 2 113 3.5E-22 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 SUPERFAMILY SSF47823 8 98 4.9E-10 T 28-03-2018 IPR010998 Integrase, Lambda-type, N-terminal CI104_RS24795 29146062637ebfdfa472c3b636a66c77 298 SUPERFAMILY SSF56349 107 292 1.88E-54 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS22100 40e9a353efe6c68f01197a44b4606826 428 TIGRFAM TIGR00786 dctM: TRAP transporter, DctM subunit 17 422 1.8E-130 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CI104_RS22100 40e9a353efe6c68f01197a44b4606826 428 PIRSF PIRSF006066 1 428 3.5E-175 T 28-03-2018 IPR004681 TRAP transporter permease protein GO:0016021 CI104_RS22100 40e9a353efe6c68f01197a44b4606826 428 Pfam PF06808 Tripartite ATP-independent periplasmic transporter, DctM component 10 417 9.5E-113 T 28-03-2018 IPR010656 TRAP C4-dicarboxylate transport system permease DctM subunit CI104_RS08200 e9de184e3b03c7f4ad99209fd89dcb67 49 Hamap MF_01484 Multidrug efflux pump accessory protein AcrZ [acrZ]. 1 46 19.526 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CI104_RS08200 e9de184e3b03c7f4ad99209fd89dcb67 49 Pfam PF10766 Multidrug efflux pump-associated protein AcrZ 1 48 1.1E-30 T 28-03-2018 IPR019702 Multidrug efflux pump accessory protein AcrZ GO:0005886|GO:0006855|GO:0015238 CI104_RS21070 83cbd35a29c6fcc15437595440d41a99 129 TIGRFAM TIGR00527 gcvH: glycine cleavage system H protein 3 129 5.3E-59 T 28-03-2018 IPR017453 Glycine cleavage system H-protein, subgroup GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CI104_RS21070 83cbd35a29c6fcc15437595440d41a99 129 Gene3D G3DSA:2.40.50.100 6 129 4.0E-48 T 28-03-2018 CI104_RS21070 83cbd35a29c6fcc15437595440d41a99 129 Pfam PF01597 Glycine cleavage H-protein 8 128 2.9E-48 T 28-03-2018 IPR033753 Glycine cleavage system H-protein/Simiate CI104_RS21070 83cbd35a29c6fcc15437595440d41a99 129 ProSitePatterns PS00189 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 49 78 - T 28-03-2018 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site Reactome: R-HSA-389661 CI104_RS21070 83cbd35a29c6fcc15437595440d41a99 129 SUPERFAMILY SSF51230 4 128 5.5E-45 T 28-03-2018 IPR011053 Single hybrid motif CI104_RS21070 83cbd35a29c6fcc15437595440d41a99 129 Hamap MF_00272 Glycine cleavage system H protein [gcvH]. 5 127 41.976 T 28-03-2018 IPR002930 Glycine cleavage system H-protein GO:0005960|GO:0019464 Reactome: R-HSA-389661|Reactome: R-HSA-6783984 CI104_RS02085 b62c1dc417c418f6555850ca214a3656 63 Pfam PF00831 Ribosomal L29 protein 4 60 1.1E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02085 b62c1dc417c418f6555850ca214a3656 63 SUPERFAMILY SSF46561 1 61 1.2E-21 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02085 b62c1dc417c418f6555850ca214a3656 63 ProSitePatterns PS00579 Ribosomal protein L29 signature. 39 53 - T 28-03-2018 IPR018254 Ribosomal protein L29, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02085 b62c1dc417c418f6555850ca214a3656 63 Gene3D G3DSA:1.10.287.310 1 63 1.1E-22 T 28-03-2018 CI104_RS02085 b62c1dc417c418f6555850ca214a3656 63 TIGRFAM TIGR00012 L29: ribosomal protein uL29 5 60 7.4E-22 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02085 b62c1dc417c418f6555850ca214a3656 63 Hamap MF_00374 50S ribosomal protein L29 [rpmC]. 1 60 18.547 T 28-03-2018 IPR001854 Ribosomal protein L29/L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72689|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS08640 73b264467823ae85cebb68b582a4f76e 270 ProSitePatterns PS01229 Hypothetical cof family signature 2. 213 235 - T 28-03-2018 CI104_RS08640 73b264467823ae85cebb68b582a4f76e 270 Pfam PF08282 haloacid dehalogenase-like hydrolase 6 259 1.8E-52 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08640 73b264467823ae85cebb68b582a4f76e 270 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 5 232 8.1E-18 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS08640 73b264467823ae85cebb68b582a4f76e 270 TIGRFAM TIGR00099 Cof-subfamily: Cof-like hydrolase 5 259 4.0E-55 T 28-03-2018 IPR000150 Cof family GO:0016787 CI104_RS08640 73b264467823ae85cebb68b582a4f76e 270 SUPERFAMILY SSF56784 1 263 6.87E-61 T 28-03-2018 IPR023214 HAD-like domain CI104_RS08640 73b264467823ae85cebb68b582a4f76e 270 Gene3D G3DSA:3.40.50.1000 1 268 2.9E-34 T 28-03-2018 IPR023214 HAD-like domain CI104_RS28415 fcebfce9dc4a07f1ba404736646029c0 185 SUPERFAMILY SSF52833 80 178 6.01E-10 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS28415 fcebfce9dc4a07f1ba404736646029c0 185 Gene3D G3DSA:3.40.30.10 47 184 1.2E-8 T 28-03-2018 CI104_RS28415 fcebfce9dc4a07f1ba404736646029c0 185 TIGRFAM TIGR02738 TrbB: type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB 16 180 5.8E-56 T 28-03-2018 IPR014109 Type-F conjugative transfer system pilin assembly thiol-disulphide isomerase TrbB CI104_RS28415 fcebfce9dc4a07f1ba404736646029c0 185 Pfam PF13728 F plasmid transfer operon protein 82 168 1.5E-11 T 28-03-2018 CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 278 289 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 Gene3D G3DSA:3.30.70.20 221 253 8.2E-10 T 28-03-2018 CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 Gene3D G3DSA:1.10.1060.10 283 318 0.0033 T 28-03-2018 CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 SUPERFAMILY SSF54862 109 129 3.41E-22 T 28-03-2018 CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 SUPERFAMILY SSF54862 181 295 3.41E-22 T 28-03-2018 CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 Pfam PF12801 4Fe-4S binding domain 97 142 2.4E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 Pfam PF12801 4Fe-4S binding domain 201 246 1.6E-8 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS10055 c6fa605ee74449d085102c7047bbcb98 359 Gene3D G3DSA:3.30.70.20 254 282 1.0E-8 T 28-03-2018 CI104_RS16825 26ea4267d82d8987fe01823501cf560f 452 Gene3D G3DSA:1.20.1250.20 12 212 2.9E-40 T 28-03-2018 CI104_RS16825 26ea4267d82d8987fe01823501cf560f 452 SUPERFAMILY SSF103473 7 431 6.15E-84 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16825 26ea4267d82d8987fe01823501cf560f 452 Gene3D G3DSA:1.20.1250.20 231 438 2.3E-31 T 28-03-2018 CI104_RS16825 26ea4267d82d8987fe01823501cf560f 452 Pfam PF07690 Major Facilitator Superfamily 28 285 3.5E-34 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS01535 ff584ede43b015e93b20aa5302ebbdab 197 Pfam PF01914 MarC family integral membrane protein 1 195 9.5E-64 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CI104_RS01535 ff584ede43b015e93b20aa5302ebbdab 197 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 4 191 4.1E-30 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CI104_RS10595 ce479e0a369f18153e6feb9e5aa2dc98 210 Pfam PF13036 Peptidoglycan-synthase activator LpoB 72 206 1.9E-36 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB CI104_RS10595 ce479e0a369f18153e6feb9e5aa2dc98 210 Gene3D G3DSA:3.40.50.10070 91 210 3.4E-12 T 28-03-2018 CI104_RS10595 ce479e0a369f18153e6feb9e5aa2dc98 210 TIGRFAM TIGR02722 lp_: uncharacterized lipoprotein 3 209 8.5E-60 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB CI104_RS10595 ce479e0a369f18153e6feb9e5aa2dc98 210 Hamap MF_01889 Penicillin-binding protein activator LpoB [lpoB]. 1 208 34.207 T 28-03-2018 IPR014094 Penicillin-binding protein activator LpoB CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Gene3D G3DSA:3.40.50.300 2 153 2.2E-31 T 28-03-2018 CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Pfam PF12002 MgsA AAA+ ATPase C terminal 268 434 2.1E-66 T 28-03-2018 IPR021886 MgsA AAA+ ATPase C-terminal CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Pfam PF00004 ATPase family associated with various cellular activities (AAA) 53 159 4.9E-17 T 28-03-2018 IPR003959 ATPase, AAA-type, core GO:0005524 CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 SMART SM00382 49 165 2.8E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Gene3D G3DSA:1.10.3710.10 348 447 8.6E-35 T 28-03-2018 CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 SUPERFAMILY SSF48019 252 434 9.07E-73 T 28-03-2018 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal GO:0003677|GO:0006260 Reactome: R-HSA-110312|Reactome: R-HSA-110314|Reactome: R-HSA-110320|Reactome: R-HSA-174411|Reactome: R-HSA-5651801|Reactome: R-HSA-5655862|Reactome: R-HSA-5656121|Reactome: R-HSA-5656169|Reactome: R-HSA-5685942|Reactome: R-HSA-5696397|Reactome: R-HSA-5696400|Reactome: R-HSA-6782135|Reactome: R-HSA-6782210|Reactome: R-HSA-69091 CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Pfam PF16193 AAA C-terminal domain 188 267 3.6E-22 T 28-03-2018 IPR032423 AAA C-terminal domain CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Gene3D G3DSA:1.10.8.60 154 242 2.0E-19 T 28-03-2018 CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 Gene3D G3DSA:1.20.272.10 252 346 3.7E-37 T 28-03-2018 CI104_RS08930 1a9539b9cec43b29ad8535310d7dda83 447 SUPERFAMILY SSF52540 6 234 1.3E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16010 acaf05a02842664fae034b331c30464d 438 Gene3D G3DSA:1.20.1250.20 17 236 2.0E-21 T 28-03-2018 CI104_RS16010 acaf05a02842664fae034b331c30464d 438 TIGRFAM TIGR00883 2A0106: MFS transporter, metabolite:H+ symporter (MHS) family protein 30 425 9.5E-149 T 28-03-2018 IPR004736 Citrate-proton symport GO:0005215|GO:0006810|GO:0016021 CI104_RS16010 acaf05a02842664fae034b331c30464d 438 Gene3D G3DSA:1.20.1250.20 237 438 2.6E-18 T 28-03-2018 CI104_RS16010 acaf05a02842664fae034b331c30464d 438 Pfam PF00083 Sugar (and other) transporter 28 417 8.9E-20 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS16010 acaf05a02842664fae034b331c30464d 438 SUPERFAMILY SSF103473 11 433 1.57E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16010 acaf05a02842664fae034b331c30464d 438 ProSitePatterns PS00217 Sugar transport proteins signature 2. 134 159 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS09935 b87971076ead141e5f7a3f799de7e6c0 166 Gene3D G3DSA:3.40.1650.10 3 132 7.3E-25 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS09935 b87971076ead141e5f7a3f799de7e6c0 166 Pfam PF05025 RbsD / FucU transport protein family 1 130 2.4E-29 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS09935 b87971076ead141e5f7a3f799de7e6c0 166 SUPERFAMILY SSF102546 1 129 9.81E-30 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS06400 518da24647a0b326bc4c6896d572da4d 192 Pfam PF03923 Uncharacterized lipoprotein 29 188 1.3E-52 T 28-03-2018 IPR005619 Uncharacterised protein family, YajG CI104_RS06400 518da24647a0b326bc4c6896d572da4d 192 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 1 19 7.9E-7 T 28-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site CI104_RS12925 83ecf5fa4ae66af3010e13de5b1a9e33 175 Gene3D G3DSA:3.40.630.30 7 175 6.5E-26 T 28-03-2018 CI104_RS12925 83ecf5fa4ae66af3010e13de5b1a9e33 175 SUPERFAMILY SSF55729 17 175 7.67E-24 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS12925 83ecf5fa4ae66af3010e13de5b1a9e33 175 Pfam PF13673 Acetyltransferase (GNAT) domain 70 153 1.7E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS22005 56bb065de403969bb2c36880c9fa3bf1 167 Gene3D G3DSA:3.40.630.30 2 151 3.4E-28 T 28-03-2018 CI104_RS22005 56bb065de403969bb2c36880c9fa3bf1 167 SUPERFAMILY SSF55729 9 167 2.92E-32 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS22005 56bb065de403969bb2c36880c9fa3bf1 167 Pfam PF00583 Acetyltransferase (GNAT) family 46 144 7.7E-15 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS24600 a975340910010086faff5ab148050dcb 168 TIGRFAM TIGR00176 mobB: molybdopterin-guanine dinucleotide biosynthesis protein B 5 164 6.2E-51 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CI104_RS24600 a975340910010086faff5ab148050dcb 168 SUPERFAMILY SSF52540 2 165 2.82E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24600 a975340910010086faff5ab148050dcb 168 Pfam PF03205 Molybdopterin guanine dinucleotide synthesis protein B 5 139 1.1E-47 T 28-03-2018 IPR004435 Molybdopterin-guanine dinucleotide biosynthesis protein B (MobB) domain GO:0005525|GO:0006777 CI104_RS24600 a975340910010086faff5ab148050dcb 168 Gene3D G3DSA:3.40.50.300 1 168 4.9E-28 T 28-03-2018 CI104_RS00505 21a1cec67069c8c0e7abd3e80970a9a8 151 SUPERFAMILY SSF51283 1 150 4.71E-55 T 28-03-2018 IPR029054 dUTPase-like CI104_RS00505 21a1cec67069c8c0e7abd3e80970a9a8 151 Pfam PF00692 dUTPase 16 149 4.6E-44 T 28-03-2018 IPR029054 dUTPase-like CI104_RS00505 21a1cec67069c8c0e7abd3e80970a9a8 151 Hamap MF_00116 Deoxyuridine 5'-triphosphate nucleotidohydrolase [dut]. 6 150 34.371 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CI104_RS00505 21a1cec67069c8c0e7abd3e80970a9a8 151 Gene3D G3DSA:2.70.40.10 116 150 5.5E-16 T 28-03-2018 CI104_RS00505 21a1cec67069c8c0e7abd3e80970a9a8 151 Gene3D G3DSA:2.70.40.10 2 115 4.4E-40 T 28-03-2018 CI104_RS00505 21a1cec67069c8c0e7abd3e80970a9a8 151 TIGRFAM TIGR00576 dut: dUTP diphosphatase 10 150 5.6E-50 T 28-03-2018 IPR008181 Deoxyuridine triphosphate nucleotidohydrolase GO:0004170|GO:0046080 KEGG: 00240+3.6.1.23|Reactome: R-HSA-499943 CI104_RS02970 1ff626dd324d0ca0f54fad6401336c50 172 Pfam PF01965 DJ-1/PfpI family 3 167 6.7E-55 T 28-03-2018 IPR002818 DJ-1/PfpI CI104_RS02970 1ff626dd324d0ca0f54fad6401336c50 172 Gene3D G3DSA:3.40.50.880 1 171 5.0E-39 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS02970 1ff626dd324d0ca0f54fad6401336c50 172 TIGRFAM TIGR01382 PfpI: intracellular protease, PfpI family 4 170 1.1E-69 T 28-03-2018 IPR006286 Peptidase C56, PfpI CI104_RS02970 1ff626dd324d0ca0f54fad6401336c50 172 SUPERFAMILY SSF52317 3 170 5.84E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS15590 02ad4010ad599a385a3e78917c97cefb 329 SUPERFAMILY SSF53822 26 325 2.55E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS15590 02ad4010ad599a385a3e78917c97cefb 329 Gene3D G3DSA:3.40.50.2300 21 145 1.2E-11 T 28-03-2018 CI104_RS15590 02ad4010ad599a385a3e78917c97cefb 329 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 26 319 3.8E-94 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS15590 02ad4010ad599a385a3e78917c97cefb 329 PIRSF PIRSF002816 1 326 8.3E-152 T 28-03-2018 IPR026266 L-arabinose-binding periplasmic protein GO:0042882 CI104_RS15590 02ad4010ad599a385a3e78917c97cefb 329 Gene3D G3DSA:3.40.50.2300 146 293 6.8E-17 T 28-03-2018 CI104_RS15655 bde9ece737639e23f3f83c991b94bc45 153 Pfam PF15941 FidL-like putative membrane protein 75 150 4.7E-8 T 28-03-2018 IPR031854 Putative membrane protein FidL-like CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 Pfam PF00248 Aldo/keto reductase family 16 296 1.1E-52 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 PRINTS PR00069 Aldo-keto reductase signature 226 250 3.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 PRINTS PR00069 Aldo-keto reductase signature 42 66 3.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 PRINTS PR00069 Aldo-keto reductase signature 138 155 3.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 PRINTS PR00069 Aldo-keto reductase signature 104 122 3.8E-6 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 Gene3D G3DSA:3.20.20.100 1 299 2.7E-68 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS09920 6f5198d0748bd559df418f1798b4b633 316 SUPERFAMILY SSF51430 1 298 4.32E-66 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS24715 adb07eeaeb8c7881c40904ef198b8699 253 SUPERFAMILY SSF53167 6 250 3.67E-73 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS24715 adb07eeaeb8c7881c40904ef198b8699 253 ProSitePatterns PS01232 Purine and other phosphorylases family 1 signature. 66 81 - T 28-03-2018 IPR018016 Nucleoside phosphorylase, conserved site GO:0016763 KEGG: 00230+2.4.2.1|KEGG: 00240+2.4.2.1|KEGG: 00760+2.4.2.1|MetaCyc: PWY-4202|MetaCyc: PWY-5532|MetaCyc: PWY-5695|MetaCyc: PWY-6608|MetaCyc: PWY-6609|MetaCyc: PWY-6611|MetaCyc: PWY-6620|MetaCyc: PWY-6627|MetaCyc: PWY-6644|MetaCyc: PWY-7179|MetaCyc: PWY-7179-1|Reactome: R-HSA-73614|Reactome: R-HSA-73621 CI104_RS24715 adb07eeaeb8c7881c40904ef198b8699 253 Pfam PF01048 Phosphorylase superfamily 21 247 7.7E-41 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS24715 adb07eeaeb8c7881c40904ef198b8699 253 Gene3D G3DSA:3.40.50.1580 3 253 3.8E-55 T 28-03-2018 CI104_RS24715 adb07eeaeb8c7881c40904ef198b8699 253 TIGRFAM TIGR01718 Uridine-psphlse: uridine phosphorylase 6 253 6.0E-130 T 28-03-2018 IPR010058 Uridine phosphorylase GO:0004850|GO:0005737|GO:0009166 KEGG: 00240+2.4.2.3|KEGG: 00983+2.4.2.3|MetaCyc: PWY-5532 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 TIGRFAM TIGR01972 NDH_I_M: proton-translocating NADH-quinone oxidoreductase, chain M 3 499 1.3E-182 T 28-03-2018 IPR010227 NADH-quinone oxidoreductase, chain M/4 GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 337 356 2.9E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 249 273 2.9E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 389 415 2.9E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 139 158 2.9E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 PRINTS PR01437 NADH-ubiquinone oxidoreductase subunit 4 signature 174 198 2.9E-37 T 28-03-2018 IPR003918 NADH:ubiquinone oxidoreductase GO:0008137|GO:0042773|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17495 e7f37ff92d1cad2dad99552730349291 509 Pfam PF00361 Proton-conducting membrane transporter 134 430 6.9E-69 T 28-03-2018 IPR001750 NADH:quinone oxidoreductase/Mrp antiporter, membrane subunit Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 SUPERFAMILY SSF116726 291 374 4.45E-11 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Hamap MF_01015 Putative transport protein YbjL [ybjL]. 1 557 57.676 T 28-03-2018 IPR023017 Transport protein YbjL, putative CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 SUPERFAMILY SSF116726 227 282 3.4E-10 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Pfam PF02080 TrkA-C domain 229 281 2.8E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Pfam PF02080 TrkA-C domain 305 371 2.5E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Pfam PF06826 Predicted Permease Membrane Region 17 182 1.1E-39 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Pfam PF06826 Predicted Permease Membrane Region 385 554 1.3E-41 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Gene3D G3DSA:3.30.70.1450 295 375 7.4E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 391 541 4.3E-44 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 21 169 6.6E-38 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS08670 fa3447198b700b87d91bf9168295ace2 561 Gene3D G3DSA:3.30.70.1450 216 291 1.3E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS10205 0a0416fa4ecd67589ceb8312ae66299c 302 Pfam PF02562 PhoH-like protein 97 301 5.6E-77 T 28-03-2018 IPR003714 PhoH-like protein GO:0005524 CI104_RS10205 0a0416fa4ecd67589ceb8312ae66299c 302 SUPERFAMILY SSF52540 96 279 1.24E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10205 0a0416fa4ecd67589ceb8312ae66299c 302 Gene3D G3DSA:3.40.50.300 94 301 6.6E-21 T 28-03-2018 CI104_RS09800 88ebaca834d916e0ad02ec2709e7cd91 449 Pfam PF02447 GntP family permease 1 448 8.6E-182 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS09800 88ebaca834d916e0ad02ec2709e7cd91 449 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 449 1.8E-197 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS09800 88ebaca834d916e0ad02ec2709e7cd91 449 PIRSF PIRSF002746 1 449 5.6E-172 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS13320 a07ae02dd0197b019858edad8fd69e59 705 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 157 1.5E-22 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS13320 a07ae02dd0197b019858edad8fd69e59 705 Gene3D G3DSA:2.170.130.10 23 163 4.0E-30 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS13320 a07ae02dd0197b019858edad8fd69e59 705 Gene3D G3DSA:2.40.170.20 164 702 1.5E-83 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS13320 a07ae02dd0197b019858edad8fd69e59 705 Pfam PF00593 TonB dependent receptor 237 701 3.6E-57 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS13320 a07ae02dd0197b019858edad8fd69e59 705 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 48 701 5.4E-70 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS13320 a07ae02dd0197b019858edad8fd69e59 705 SUPERFAMILY SSF56935 23 703 2.38E-125 T 28-03-2018 CI104_RS05440 bdede56bac1cf8ef989df1d69c77d36d 271 SUPERFAMILY SSF53850 33 271 2.53E-84 T 28-03-2018 CI104_RS05440 bdede56bac1cf8ef989df1d69c77d36d 271 PIRSF PIRSF002854 1 271 4.5E-109 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS05440 bdede56bac1cf8ef989df1d69c77d36d 271 Gene3D G3DSA:3.40.190.10 127 271 2.8E-51 T 28-03-2018 CI104_RS05440 bdede56bac1cf8ef989df1d69c77d36d 271 Gene3D G3DSA:3.40.190.10 32 126 3.1E-22 T 28-03-2018 CI104_RS05440 bdede56bac1cf8ef989df1d69c77d36d 271 TIGRFAM TIGR00363 TIGR00363: lipoprotein, YaeC family 14 271 9.7E-151 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS05440 bdede56bac1cf8ef989df1d69c77d36d 271 Pfam PF03180 NLPA lipoprotein 33 271 3.8E-101 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS12640 92b99d07c5f7beb117284eb9edc9f5c7 120 Pfam PF00893 Small Multidrug Resistance protein 3 93 4.6E-26 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS12640 92b99d07c5f7beb117284eb9edc9f5c7 120 SUPERFAMILY SSF103481 7 107 3.01E-17 T 28-03-2018 CI104_RS12640 92b99d07c5f7beb117284eb9edc9f5c7 120 Hamap MF_01598 Spermidine export protein MdtJ [mdtJ]. 1 120 30.184 T 28-03-2018 IPR023740 Spermidine export protein MdtJ GO:0005886|GO:0015606|GO:0015848 CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 SUPERFAMILY SSF51556 1 260 3.01E-87 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 TIGRFAM TIGR00010 TIGR00010: hydrolase, TatD family 3 256 1.3E-95 T 28-03-2018 IPR015991 Uncharacterised hydrolase TatD-type GO:0004536 CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 ProSitePatterns PS01091 TatD deoxyribonuclease family signature 3. 191 207 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 Pfam PF01026 TatD related DNase 4 255 1.7E-75 T 28-03-2018 IPR001130 TatD family GO:0016788 CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 Gene3D G3DSA:3.20.20.140 1 265 2.2E-80 T 28-03-2018 CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 PIRSF PIRSF005902 1 259 1.6E-75 T 28-03-2018 IPR001130 TatD family GO:0016788 CI104_RS10570 7a85dbf1191553a278c56ae810c8b11a 265 ProSitePatterns PS01137 TatD deoxyribonuclease family signature 1. 3 11 - T 28-03-2018 IPR018228 Deoxyribonuclease, TatD-related, conserved site GO:0016888 CI104_RS28315 e31ed3ce9a6664e9310c79ebcf1d3d12 474 Gene3D G3DSA:1.20.5.1000 69 125 1.6E-4 T 28-03-2018 CI104_RS28315 e31ed3ce9a6664e9310c79ebcf1d3d12 474 Pfam PF03743 Bacterial conjugation TrbI-like protein 209 405 4.6E-29 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CI104_RS08695 30394a85cf7c97e8a77f7ad0d0eb7eda 240 Gene3D G3DSA:3.40.109.10 1 240 6.1E-60 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS08695 30394a85cf7c97e8a77f7ad0d0eb7eda 240 SUPERFAMILY SSF55469 1 239 1.14E-73 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS08695 30394a85cf7c97e8a77f7ad0d0eb7eda 240 Pfam PF00881 Nitroreductase family 9 159 2.5E-19 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CI104_RS08695 30394a85cf7c97e8a77f7ad0d0eb7eda 240 PIRSF PIRSF005426 1 240 3.4E-85 T 28-03-2018 IPR016446 Flavin oxidoreductase Frp family GO:0016491|GO:0055114 CI104_RS17820 a3608b470473cadb28c947c6ea687560 183 Pfam PF01713 Smr domain 98 172 7.7E-18 T 28-03-2018 IPR002625 Smr domain CI104_RS17820 a3608b470473cadb28c947c6ea687560 183 SMART SM00463 95 173 1.4E-21 T 28-03-2018 IPR002625 Smr domain CI104_RS17820 a3608b470473cadb28c947c6ea687560 183 SUPERFAMILY SSF160443 96 170 1.31E-9 T 28-03-2018 IPR002625 Smr domain CI104_RS17820 a3608b470473cadb28c947c6ea687560 183 Hamap MF_01042 UPF0115 protein YfcN [yfcN]. 1 174 42.379 T 28-03-2018 IPR022990 Uncharacterised protein family UPF0115 CI104_RS16025 00468363f397b90bc139d5125253ebeb 690 Gene3D G3DSA:3.40.50.300 1 410 6.7E-24 T 28-03-2018 CI104_RS16025 00468363f397b90bc139d5125253ebeb 690 SUPERFAMILY SSF52540 301 403 1.39E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16025 00468363f397b90bc139d5125253ebeb 690 SUPERFAMILY SSF52540 1 195 1.39E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS16025 00468363f397b90bc139d5125253ebeb 690 Pfam PF13175 AAA ATPase domain 1 400 4.7E-51 T 28-03-2018 CI104_RS09265 6027097de5c4a512d9a07e9f4b9898e1 720 TIGRFAM TIGR01666 YCCS: TIGR01666 family membrane protein 8 706 0.0 T 28-03-2018 IPR010019 Integral membrane protein, YccS CI104_RS09265 6027097de5c4a512d9a07e9f4b9898e1 720 TIGRFAM TIGR01667 YCCS_YHJK: integral membrane protein, YccS/YhfK family 8 705 0.0 T 28-03-2018 IPR010020 Integral membrane protein, YccS/YhfK CI104_RS09265 6027097de5c4a512d9a07e9f4b9898e1 720 Pfam PF12805 FUSC-like inner membrane protein yccS 66 345 2.1E-109 T 28-03-2018 IPR032692 Integral membrane protein YccS, N-terminal CI104_RS09265 6027097de5c4a512d9a07e9f4b9898e1 720 Pfam PF13515 Fusaric acid resistance protein-like 405 525 7.7E-25 T 28-03-2018 CI104_RS26870 3ab29a9a1015e0d6b222e4bc8c43a2cc 309 SUPERFAMILY SSF56349 3 288 3.83E-49 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS26870 3ab29a9a1015e0d6b222e4bc8c43a2cc 309 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 2 70 5.4E-21 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS26870 3ab29a9a1015e0d6b222e4bc8c43a2cc 309 Pfam PF00589 Phage integrase family 88 289 3.4E-64 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS26870 3ab29a9a1015e0d6b222e4bc8c43a2cc 309 TIGRFAM TIGR02249 integrase_gron: integron integrase 1 302 1.2E-147 T 28-03-2018 IPR011946 Integrase, integron-type GO:0003677|GO:0006310|GO:0015074 CI104_RS26870 3ab29a9a1015e0d6b222e4bc8c43a2cc 309 Gene3D G3DSA:1.10.443.10 84 290 2.2E-46 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS26870 3ab29a9a1015e0d6b222e4bc8c43a2cc 309 Gene3D G3DSA:1.10.150.130 1 70 1.5E-8 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS06110 cf98c11fee4c175ce0d2c62105ccdd20 303 Pfam PF04381 Putative exonuclease, RdgC 2 300 3.8E-127 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CI104_RS06110 cf98c11fee4c175ce0d2c62105ccdd20 303 Hamap MF_00194 Recombination-associated protein RdgC [rdgC]. 2 302 43.354 T 28-03-2018 IPR007476 Putative exonuclease, RdgC GO:0006310 CI104_RS12135 e138c55cb22b3f6187cc421f14406fac 495 TIGRFAM TIGR01980 sufB: FeS assembly protein SufB 21 486 3.1E-194 T 28-03-2018 IPR010231 SUF system FeS cluster assembly, SufB GO:0016226 CI104_RS12135 e138c55cb22b3f6187cc421f14406fac 495 SUPERFAMILY SSF101960 41 86 3.27E-137 T 28-03-2018 CI104_RS12135 e138c55cb22b3f6187cc421f14406fac 495 SUPERFAMILY SSF101960 125 492 3.27E-137 T 28-03-2018 CI104_RS12135 e138c55cb22b3f6187cc421f14406fac 495 Pfam PF01458 Uncharacterized protein family (UPF0051) 234 466 8.7E-69 T 28-03-2018 IPR000825 SUF system FeS cluster assembly, SufBD GO:0016226 CI104_RS19005 a716cc71e7f036f9b06844c147dafe0b 452 Pfam PF03929 PepSY-associated TM region 15 382 1.1E-58 T 28-03-2018 IPR005625 PepSY-associated TM protein CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 SUPERFAMILY SSF46785 5 78 1.34E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 Pfam PF00392 Bacterial regulatory proteins, gntR family 13 74 9.1E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 Pfam PF07729 FCD domain 84 208 3.5E-17 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 Gene3D G3DSA:1.20.120.530 71 220 3.0E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 Gene3D G3DSA:1.10.10.10 1 70 5.3E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 SMART SM00345 16 74 4.7E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 SMART SM00895 84 210 1.4E-7 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS13325 14cfc83c2df0ddac87d3d484a7dd064a 221 SUPERFAMILY SSF48008 82 212 3.66E-17 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS20620 0bf008be4e1029fd11f2da6e923ed03c 198 SUPERFAMILY SSF56349 3 183 9.42E-41 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS20620 0bf008be4e1029fd11f2da6e923ed03c 198 Gene3D G3DSA:1.10.443.10 2 177 8.6E-36 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS20620 0bf008be4e1029fd11f2da6e923ed03c 198 Pfam PF00589 Phage integrase family 6 176 5.9E-47 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS19040 a2f3bc8bae9a8e445b5c54c40eb16a07 263 Pfam PF01578 Cytochrome C assembly protein 36 261 1.7E-45 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 SUPERFAMILY SSF51735 2 353 1.65E-90 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 Gene3D G3DSA:3.40.50.720 1 206 2.3E-27 T 28-03-2018 CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 TIGRFAM TIGR01472 gmd: GDP-mannose 4,6-dehydratase 3 353 7.5E-179 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 Pfam PF16363 GDP-mannose 4,6 dehydratase 6 346 9.5E-163 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 Gene3D G3DSA:3.90.25.10 207 248 3.1E-22 T 28-03-2018 CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 Gene3D G3DSA:3.90.25.10 249 372 1.0E-34 T 28-03-2018 CI104_RS16515 c659a98aaeb07f5e051163a14d32de3e 373 Hamap MF_00955 GDP-mannose 4,6-dehydratase [gmd]. 3 356 56.756 T 28-03-2018 IPR006368 GDP-mannose 4,6-dehydratase GO:0008446|GO:0019673 KEGG: 00051+4.2.1.47|KEGG: 00520+4.2.1.47|MetaCyc: PWY-5738|MetaCyc: PWY-5739|MetaCyc: PWY-5740|MetaCyc: PWY-66|MetaCyc: PWY-7573|Reactome: R-HSA-6787639 CI104_RS22750 bba9fa7c8693c129b7c33bbc12c4153b 556 Pfam PF15864 Protein glycosylation ligase 162 187 1.1E-7 T 28-03-2018 IPR031726 Protein glycosylation ligase domain CI104_RS22750 bba9fa7c8693c129b7c33bbc12c4153b 556 Pfam PF11846 Virulence factor membrane-bound polymerase, C-terminal 366 531 1.8E-13 T 28-03-2018 IPR021797 Virulence factor membrane-bound polymerase, C-terminal CI104_RS22750 bba9fa7c8693c129b7c33bbc12c4153b 556 Pfam PF04932 O-Antigen ligase 195 346 8.5E-13 T 28-03-2018 IPR007016 O-antigen ligase-related CI104_RS21510 4ef4f9a33087248cc676bf8fc5357380 449 Gene3D G3DSA:1.20.1250.20 220 446 3.2E-26 T 28-03-2018 CI104_RS21510 4ef4f9a33087248cc676bf8fc5357380 449 Pfam PF07690 Major Facilitator Superfamily 19 392 2.5E-57 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS21510 4ef4f9a33087248cc676bf8fc5357380 449 SUPERFAMILY SSF103473 6 431 7.98E-80 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS21510 4ef4f9a33087248cc676bf8fc5357380 449 PIRSF PIRSF002808 2 440 1.5E-45 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS21510 4ef4f9a33087248cc676bf8fc5357380 449 Gene3D G3DSA:1.20.1250.20 4 208 3.8E-35 T 28-03-2018 CI104_RS21510 4ef4f9a33087248cc676bf8fc5357380 449 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 20 427 5.0E-125 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS09795 40b4a572559499cb1be3a737e9406974 229 SUPERFAMILY SSF46785 1 62 1.73E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09795 40b4a572559499cb1be3a737e9406974 229 Pfam PF08279 HTH domain 6 60 3.6E-16 T 28-03-2018 IPR013196 Helix-turn-helix, type 11 CI104_RS09795 40b4a572559499cb1be3a737e9406974 229 Gene3D G3DSA:1.10.10.10 1 63 8.7E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09795 40b4a572559499cb1be3a737e9406974 229 Pfam PF13280 WYL domain 135 208 1.2E-14 T 28-03-2018 IPR026881 WYL domain CI104_RS05985 a8a69b6f56689e8e090e1b8e489258ee 275 SUPERFAMILY SSF161098 75 258 2.22E-35 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS05985 a8a69b6f56689e8e090e1b8e489258ee 275 Gene3D G3DSA:1.10.3720.10 20 273 1.2E-32 T 28-03-2018 CI104_RS05985 a8a69b6f56689e8e090e1b8e489258ee 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 98 269 1.5E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 Pfam PF00258 Flavodoxin 5 160 3.8E-26 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 SUPERFAMILY SSF52218 1 168 3.88E-45 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 PIRSF PIRSF038996 1 172 1.3E-54 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 TIGRFAM TIGR01752 flav_long: flavodoxin 2 168 3.6E-68 T 28-03-2018 IPR010086 Flavodoxin, long chain GO:0010181 CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 Gene3D G3DSA:3.40.50.360 1 76 6.5E-15 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 Gene3D G3DSA:3.40.50.360 77 173 3.5E-16 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS21020 272919753b2ece5fe06e6035ff8454a5 173 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 Gene3D G3DSA:1.10.860.10 18 169 3.5E-48 T 28-03-2018 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 Pfam PF03796 DnaB-like helicase C terminal domain 206 462 4.3E-111 T 28-03-2018 IPR007694 DNA helicase, DnaB-like, C-terminal GO:0003678|GO:0005524|GO:0006260 Reactome: R-HSA-2151201 CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 SUPERFAMILY SSF52540 204 275 4.5E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 SUPERFAMILY SSF52540 302 456 4.5E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 Gene3D G3DSA:3.40.50.300 187 471 4.4E-64 T 28-03-2018 CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 SUPERFAMILY SSF48024 25 136 6.93E-39 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 Pfam PF00772 DnaB-like helicase N terminal domain 27 128 2.2E-37 T 28-03-2018 IPR007693 DNA helicase, DnaB-like, N-terminal GO:0003678|GO:0005524|GO:0006260 CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 SMART SM00382 223 429 4.2E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS23340 1138943f76612b54e12a7de9b7b18bb0 471 TIGRFAM TIGR00665 DnaB: replicative DNA helicase 27 464 1.5E-174 T 28-03-2018 IPR007692 DNA helicase, DnaB type GO:0003677|GO:0003678|GO:0005524|GO:0006260 CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 Gene3D G3DSA:3.40.50.10490 69 242 3.4E-26 T 28-03-2018 CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 SUPERFAMILY SSF53697 85 230 4.84E-31 T 28-03-2018 CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 ProSitePatterns PS00356 LacI-type HTH domain signature. 33 51 - T 28-03-2018 CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 Pfam PF01380 SIS domain 108 227 2.5E-14 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 Gene3D G3DSA:1.10.10.10 4 68 1.2E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 Pfam PF01418 Helix-turn-helix domain, rpiR family 9 71 5.6E-15 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS21050 6e84c213eb3d8c3f3a73d3299ee98c97 242 SUPERFAMILY SSF46689 6 73 1.29E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS04715 e1715e06e9590cd2b2178ddb0ae2a20a 125 Hamap MF_00791 Protein ApaG [apaG]. 1 125 32.758 T 28-03-2018 IPR023065 Uncharacterised protein family ApaG CI104_RS04715 e1715e06e9590cd2b2178ddb0ae2a20a 125 Gene3D G3DSA:2.60.40.1470 3 125 1.3E-41 T 28-03-2018 IPR007474 ApaG domain CI104_RS04715 e1715e06e9590cd2b2178ddb0ae2a20a 125 SUPERFAMILY SSF110069 5 125 3.79E-47 T 28-03-2018 IPR007474 ApaG domain CI104_RS04715 e1715e06e9590cd2b2178ddb0ae2a20a 125 Pfam PF04379 ApaG domain 18 102 4.5E-33 T 28-03-2018 IPR007474 ApaG domain CI104_RS20625 3ed06e96090a751d5c83ba033ddf4e60 182 SUPERFAMILY SSF49401 32 182 1.34E-37 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20625 3ed06e96090a751d5c83ba033ddf4e60 182 Pfam PF00419 Fimbrial protein 33 182 1.7E-23 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20625 3ed06e96090a751d5c83ba033ddf4e60 182 Gene3D G3DSA:2.60.40.1090 31 182 1.2E-39 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS26615 e66dacad5bd95aa0ee351d4b90dbc0be 78 ProDom PD007968 PLASMID MERE URF-1 RESISTANCE MERCURY MERCURIC DELTA URF1 PRECURSOR TNIB 18 78 2.0E-27 T 28-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 CI104_RS26615 e66dacad5bd95aa0ee351d4b90dbc0be 78 Pfam PF05052 MerE protein 1 75 1.7E-47 T 28-03-2018 IPR007746 MerE GO:0015097|GO:0015694|GO:0016020 CI104_RS12190 b21bad212bb202b7c14e5952110476df 270 Gene3D G3DSA:3.40.190.10 120 269 3.2E-43 T 28-03-2018 CI104_RS12190 b21bad212bb202b7c14e5952110476df 270 SUPERFAMILY SSF53850 24 268 1.09E-73 T 28-03-2018 CI104_RS12190 b21bad212bb202b7c14e5952110476df 270 Pfam PF03180 NLPA lipoprotein 25 268 2.4E-77 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS12190 b21bad212bb202b7c14e5952110476df 270 PIRSF PIRSF002854 2 269 1.4E-90 T 28-03-2018 IPR004872 Lipoprotein NlpA family CI104_RS12190 b21bad212bb202b7c14e5952110476df 270 Gene3D G3DSA:3.40.190.10 24 119 2.3E-24 T 28-03-2018 CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 Pfam PF01546 Peptidase family M20/M25/M40 78 395 1.8E-23 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 SUPERFAMILY SSF53187 10 185 7.8E-54 T 28-03-2018 CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 SUPERFAMILY SSF53187 316 399 7.8E-54 T 28-03-2018 CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 TIGRFAM TIGR03526 selenium_YgeY: putative selenium metabolism hydrolase 8 400 1.0E-219 T 28-03-2018 IPR017706 Peptidase M20/DapE, YgeY CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 ProSitePatterns PS00758 ArgE / dapE / ACY1 / CPG2 / yscS family signature 1. 76 85 - T 28-03-2018 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site GO:0006508|GO:0008237 CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 Pfam PF07687 Peptidase dimerisation domain 183 286 1.7E-17 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 Gene3D G3DSA:3.40.630.10 6 286 4.8E-49 T 28-03-2018 CI104_RS20915 2cf576403a2b7036dc24c387792fb2fa 403 SUPERFAMILY SSF55031 186 282 2.24E-13 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS24835 e52fca89151e000786a79064a8175f03 401 Pfam PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase 38 366 3.0E-132 T 28-03-2018 IPR007470 Putative uroporphyrinogen-III C-methyltransferase HemX CI104_RS24835 e52fca89151e000786a79064a8175f03 401 Gene3D G3DSA:3.90.20.10 36 140 2.5E-5 T 28-03-2018 CI104_RS27565 743578a70923800aa1360bd377a50659 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.4E-38 T 28-03-2018 IPR008878 Transposase IS66, Orf2 CI104_RS19610 3f035be08726bb8bd9d497f76a6479f4 245 Pfam PF03591 AzlC protein 24 165 3.5E-38 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease CI104_RS24595 d407e6917344d30a0cb22b5795126489 194 Gene3D G3DSA:3.90.550.10 1 193 2.8E-34 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS24595 d407e6917344d30a0cb22b5795126489 194 SUPERFAMILY SSF53448 7 187 6.53E-36 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS24595 d407e6917344d30a0cb22b5795126489 194 TIGRFAM TIGR02665 molyb_mobA: molybdenum cofactor guanylyltransferase 7 187 5.0E-69 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CI104_RS24595 d407e6917344d30a0cb22b5795126489 194 Hamap MF_00316 Molybdenum cofactor guanylyltransferase [mobA]. 5 190 29.196 T 28-03-2018 IPR013482 Molybdenum cofactor guanylyltransferase GO:0003824|GO:0006777 KEGG: 00790+2.7.7.77|MetaCyc: PWY-5964|MetaCyc: PWY-7639 CI104_RS24595 d407e6917344d30a0cb22b5795126489 194 Pfam PF12804 MobA-like NTP transferase domain 9 160 1.4E-34 T 28-03-2018 IPR025877 MobA-like NTP transferase CI104_RS16950 7ae58b91b8a7bbe4f0e1f3a2d27a1b41 313 SUPERFAMILY SSF53613 7 305 5.92E-59 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16950 7ae58b91b8a7bbe4f0e1f3a2d27a1b41 313 Pfam PF00294 pfkB family carbohydrate kinase 5 295 1.8E-61 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS16950 7ae58b91b8a7bbe4f0e1f3a2d27a1b41 313 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 250 263 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS16950 7ae58b91b8a7bbe4f0e1f3a2d27a1b41 313 Gene3D G3DSA:3.40.1190.20 2 312 1.4E-53 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16950 7ae58b91b8a7bbe4f0e1f3a2d27a1b41 313 ProSitePatterns PS00583 pfkB family of carbohydrate kinases signature 1. 40 64 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS10045 744037b1f5a15ab9565da412dcadb9d4 385 SUPERFAMILY SSF56796 3 383 1.83E-116 T 28-03-2018 CI104_RS10045 744037b1f5a15ab9565da412dcadb9d4 385 Gene3D G3DSA:1.20.1090.10 184 385 6.0E-53 T 28-03-2018 CI104_RS10045 744037b1f5a15ab9565da412dcadb9d4 385 Pfam PF00465 Iron-containing alcohol dehydrogenase 10 375 3.0E-112 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS10045 744037b1f5a15ab9565da412dcadb9d4 385 Gene3D G3DSA:3.40.50.1970 10 183 5.3E-50 T 28-03-2018 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 PRINTS PR00721 Stomatin signature 254 277 3.9E-18 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 PRINTS PR00721 Stomatin signature 278 296 3.9E-18 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 PRINTS PR00721 Stomatin signature 297 318 3.9E-18 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 PRINTS PR00721 Stomatin signature 234 251 3.9E-18 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 PRINTS PR00721 Stomatin signature 199 220 3.9E-18 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 PRINTS PR00721 Stomatin signature 322 345 3.9E-18 T 28-03-2018 IPR001972 Stomatin family GO:0016020 CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 Pfam PF01145 SPFH domain / Band 7 family 147 318 1.0E-21 T 28-03-2018 IPR001107 Band 7 domain CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 SMART SM00244 142 302 2.7E-16 T 28-03-2018 IPR001107 Band 7 domain CI104_RS23485 3e03e3e2328fb07a7d6b05f7a15a4095 375 SUPERFAMILY SSF117892 183 308 3.79E-27 T 28-03-2018 IPR001107 Band 7 domain CI104_RS15620 233cb9c570732bc793cdf98b72999658 472 SUPERFAMILY SSF103473 15 205 2.62E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS15620 233cb9c570732bc793cdf98b72999658 472 SUPERFAMILY SSF103473 251 462 2.62E-55 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS15620 233cb9c570732bc793cdf98b72999658 472 Gene3D G3DSA:1.20.1250.20 261 466 4.3E-16 T 28-03-2018 CI104_RS15620 233cb9c570732bc793cdf98b72999658 472 Gene3D G3DSA:1.20.1250.20 9 202 2.1E-31 T 28-03-2018 CI104_RS15620 233cb9c570732bc793cdf98b72999658 472 Pfam PF07690 Major Facilitator Superfamily 21 411 5.3E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS08185 74fce257690adc8a833cf2bd4c3e6004 338 Pfam PF16363 GDP-mannose 4,6 dehydratase 4 325 3.3E-65 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS08185 74fce257690adc8a833cf2bd4c3e6004 338 TIGRFAM TIGR01179 galE: UDP-glucose 4-epimerase GalE 2 335 1.3E-148 T 28-03-2018 IPR005886 UDP-glucose 4-epimerase GO:0003978|GO:0006012 KEGG: 00052+5.1.3.2|KEGG: 00520+5.1.3.2|MetaCyc: PWY-3821|MetaCyc: PWY-6317|MetaCyc: PWY-6397|MetaCyc: PWY-6527|MetaCyc: PWY-7328|MetaCyc: PWY-7344|Reactome: R-HSA-70370 CI104_RS08185 74fce257690adc8a833cf2bd4c3e6004 338 SUPERFAMILY SSF51735 1 337 1.42E-100 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS08185 74fce257690adc8a833cf2bd4c3e6004 338 Gene3D G3DSA:3.40.50.720 1 207 5.7E-45 T 28-03-2018 CI104_RS08185 74fce257690adc8a833cf2bd4c3e6004 338 Gene3D G3DSA:3.90.25.10 208 251 4.3E-12 T 28-03-2018 CI104_RS08185 74fce257690adc8a833cf2bd4c3e6004 338 Gene3D G3DSA:3.90.25.10 252 337 5.0E-21 T 28-03-2018 CI104_RS20465 82e052ca1d7c2689f5ebc3208fef61bb 151 Pfam PF05232 Chlorhexidine efflux transporter 9 71 1.5E-23 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter CI104_RS20465 82e052ca1d7c2689f5ebc3208fef61bb 151 Pfam PF05232 Chlorhexidine efflux transporter 77 138 5.3E-21 T 28-03-2018 IPR007896 Chlorhexidine efflux transporter CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 Pfam PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit 36 152 2.7E-26 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 ProSitePatterns PS00535 Respiratory chain NADH dehydrogenase 49 Kd subunit signature. 216 227 - T 28-03-2018 IPR014029 NADH:ubiquinone oxidoreductase, 49kDa subunit, conserved site GO:0016651|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 Pfam PF00374 Nickel-dependent hydrogenase 218 286 6.4E-13 T 28-03-2018 IPR001501 Nickel-dependent hydrogenase, large subunit GO:0016151 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 ProDom PD001581 OXIDOREDUCTASE SUBUNIT NADH DEHYDROGENASE CHAIN C NAD DEHYDROGENASE UBIQUINONE F420H2 87 141 3.0E-24 T 28-03-2018 IPR001268 NADH:ubiquinone oxidoreductase, 30kDa subunit GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 SUPERFAMILY SSF56762 193 537 4.97E-109 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 Gene3D G3DSA:1.10.645.10 379 535 2.8E-30 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 SUPERFAMILY SSF143243 9 194 5.23E-47 T 28-03-2018 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 468 537 7.4E-11 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 Pfam PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit 296 464 3.4E-34 T 28-03-2018 IPR001135 NADH-quinone oxidoreductase, subunit D GO:0016651|GO:0048038|GO:0051287|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19815 97d3bed947b1dd50ab2c2657962b1f5f 569 Gene3D G3DSA:1.10.645.10 175 378 1.3E-44 T 28-03-2018 IPR029014 NiFe hydrogenase-like Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS28470 173818f71b9f5edfaa85cc6bedee297c 197 Gene3D G3DSA:1.10.1710.10 43 196 5.4E-37 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS28470 173818f71b9f5edfaa85cc6bedee297c 197 Pfam PF12602 Fertility inhibition protein N terminal 1 70 1.9E-25 T 28-03-2018 IPR021065 Fertility inhibition protein FinO, N-terminal CI104_RS28470 173818f71b9f5edfaa85cc6bedee297c 197 SUPERFAMILY SSF48657 54 191 3.79E-31 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS28470 173818f71b9f5edfaa85cc6bedee297c 197 Pfam PF04352 ProQ/FINO family 89 192 5.3E-24 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS28470 173818f71b9f5edfaa85cc6bedee297c 197 SMART SM00945 84 193 3.4E-13 T 28-03-2018 IPR016103 ProQ/FinO domain CI104_RS12915 608a7ef5fe7f757084c9778e6495119a 119 ProDom PD076485 YNEG CYTOPLASMIC ECS2130 STY1535 1 114 2.0E-44 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 CI104_RS12915 608a7ef5fe7f757084c9778e6495119a 119 Pfam PF13811 Domain of unknown function (DUF4186) 7 112 7.6E-51 T 28-03-2018 IPR020378 Protein of unknown function DUF4186 CI104_RS14445 af85fb3629ddfd82374e8da3c9ef96a8 207 Gene3D G3DSA:2.50.20.10 30 207 1.1E-54 T 28-03-2018 CI104_RS14445 af85fb3629ddfd82374e8da3c9ef96a8 207 Pfam PF03550 Outer membrane lipoprotein LolB 50 204 1.4E-49 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CI104_RS14445 af85fb3629ddfd82374e8da3c9ef96a8 207 SUPERFAMILY SSF89392 34 206 1.84E-55 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CI104_RS14445 af85fb3629ddfd82374e8da3c9ef96a8 207 Hamap MF_00233 Outer-membrane lipoprotein LolB [lolB]. 6 206 29.666 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CI104_RS14445 af85fb3629ddfd82374e8da3c9ef96a8 207 TIGRFAM TIGR00548 lolB: outer membrane lipoprotein LolB 6 206 5.8E-95 T 28-03-2018 IPR004565 Outer membrane lipoprotein LolB GO:0009279|GO:0015031 CI104_RS20520 81431b70d741da881c790973f5bdf123 445 Pfam PF00419 Fimbrial protein 259 445 1.3E-28 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20520 81431b70d741da881c790973f5bdf123 445 PIRSF PIRSF029766 6 445 2.6E-120 T 28-03-2018 IPR011228 Uncharacterised conserved protein UCP029766 CI104_RS20520 81431b70d741da881c790973f5bdf123 445 SUPERFAMILY SSF49401 266 445 1.34E-10 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20520 81431b70d741da881c790973f5bdf123 445 Gene3D G3DSA:2.60.40.1090 264 445 6.2E-21 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS03785 532a39d4f1af1a294d53fbf77f4b19a5 68 Hamap MF_00525 Surface composition regulator [glgS]. 2 61 21.173 T 28-03-2018 IPR015065 Surface composition regulator CI104_RS03785 532a39d4f1af1a294d53fbf77f4b19a5 68 ProDom PD054490 GLYCOGEN GLGS SYNTHESIS BIOSYNTHESIS DEPENDENT BIOSYNTHESIS RPOS 3D-STRUCTURE 4 68 4.0E-29 T 28-03-2018 IPR015065 Surface composition regulator CI104_RS03785 532a39d4f1af1a294d53fbf77f4b19a5 68 Pfam PF08971 Glycogen synthesis protein 3 68 9.0E-40 T 28-03-2018 IPR015065 Surface composition regulator CI104_RS03785 532a39d4f1af1a294d53fbf77f4b19a5 68 Gene3D G3DSA:1.20.970.20 11 60 1.8E-28 T 28-03-2018 CI104_RS03785 532a39d4f1af1a294d53fbf77f4b19a5 68 SUPERFAMILY SSF109747 3 68 1.96E-39 T 28-03-2018 IPR015065 Surface composition regulator CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 SUPERFAMILY SSF54373 180 283 1.84E-24 T 28-03-2018 CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 SUPERFAMILY SSF51905 283 374 1.4E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 SUPERFAMILY SSF51905 2 182 1.4E-42 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 Pfam PF01494 FAD binding domain 6 184 4.4E-12 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 Gene3D G3DSA:3.50.50.60 1 364 8.5E-41 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 152 167 1.3E-5 T 28-03-2018 CI104_RS12030 ff16921bba06b748924979a162dd6e50 429 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 7 29 1.3E-5 T 28-03-2018 CI104_RS25110 9d4fc45dafa6ca2facb5f8b473ed7382 622 Pfam PF02705 K+ potassium transporter 14 544 5.1E-207 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CI104_RS25110 9d4fc45dafa6ca2facb5f8b473ed7382 622 TIGRFAM TIGR00794 kup: potassium uptake protein 98 622 7.5E-207 T 28-03-2018 IPR003855 Potassium transporter GO:0015079|GO:0016020|GO:0071805 CI104_RS25110 9d4fc45dafa6ca2facb5f8b473ed7382 622 Hamap MF_01522 Low affinity potassium transport system protein kup [kup]. 5 622 33.507 T 28-03-2018 IPR023051 Potassium uptake protein, low affinity, Kup CI104_RS10335 3ef80d05c23e5fd5f6348dcd6baafc45 191 Hamap MF_00780 Protein YceI [yceI]. 1 191 48.302 T 28-03-2018 IPR023480 Uncharacterised protein family UPF0312/YceI CI104_RS10335 3ef80d05c23e5fd5f6348dcd6baafc45 191 Pfam PF04264 YceI-like domain 25 186 9.8E-44 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CI104_RS10335 3ef80d05c23e5fd5f6348dcd6baafc45 191 SMART SM00867 24 188 4.1E-74 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CI104_RS10335 3ef80d05c23e5fd5f6348dcd6baafc45 191 SUPERFAMILY SSF101874 22 190 1.2E-57 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CI104_RS10335 3ef80d05c23e5fd5f6348dcd6baafc45 191 Gene3D G3DSA:2.40.128.110 23 191 8.7E-53 T 28-03-2018 IPR007372 Lipid/polyisoprenoid-binding, YceI-like CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 PIRSF PIRSF015753 5 324 1.3E-135 T 28-03-2018 IPR016639 Glutathione S-transferase (GST) KEGG: 00480+2.5.1.18|KEGG: 00980+2.5.1.18|KEGG: 00982+2.5.1.18|MetaCyc: PWY-4061|MetaCyc: PWY-6842|MetaCyc: PWY-7112|MetaCyc: PWY-7533 CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 Pfam PF13409 Glutathione S-transferase, N-terminal domain 62 158 9.3E-23 T 28-03-2018 IPR004045 Glutathione S-transferase, N-terminal GO:0005515 CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 SUPERFAMILY SSF52833 126 162 1.57E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 SUPERFAMILY SSF52833 40 99 1.57E-14 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 SUPERFAMILY SSF47616 173 324 1.23E-35 T 28-03-2018 IPR010987 Glutathione S-transferase, C-terminal-like CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 Gene3D G3DSA:3.40.30.10 42 188 4.5E-37 T 28-03-2018 CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 Gene3D G3DSA:1.20.1050.10 189 326 2.1E-42 T 28-03-2018 CI104_RS03205 6fc8d9143a402135e58575f44acba61f 329 Pfam PF13410 Glutathione S-transferase, C-terminal domain 203 257 3.5E-12 T 28-03-2018 CI104_RS15270 4774933d64997324e96a308b3e857be5 76 SUPERFAMILY SSF46575 1 75 2.22E-33 T 28-03-2018 CI104_RS15270 4774933d64997324e96a308b3e857be5 76 Gene3D G3DSA:1.20.58.250 3 65 1.1E-29 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS15270 4774933d64997324e96a308b3e857be5 76 Pfam PF06440 DNA polymerase III, theta subunit 4 71 2.5E-37 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS15270 4774933d64997324e96a308b3e857be5 76 ProDom PD057609 DNA POLYMERASE THETA SUBUNIT TRANSFERASE III NUCLEOTIDYLTRANSFERASE III DNA-DIRECTED REPLICATION 1 76 8.0E-34 T 28-03-2018 IPR009052 DNA polymerase III-theta, bacterial GO:0003677|GO:0003887|GO:0006260 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7 CI104_RS08440 3e52eb676dcc0789a3258f713d17cd8b 308 PIRSF PIRSF029038 1 308 5.9E-147 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CI104_RS08440 3e52eb676dcc0789a3258f713d17cd8b 308 Gene3D G3DSA:3.40.50.150 38 296 5.5E-53 T 28-03-2018 CI104_RS08440 3e52eb676dcc0789a3258f713d17cd8b 308 Hamap MF_01848 Ribosomal RNA large subunit methyltransferase F [rlmF]. 5 298 53.617 T 28-03-2018 IPR016909 Ribosomal RNA large subunit methyltransferase F GO:0005737|GO:0006364|GO:0008988 CI104_RS08440 3e52eb676dcc0789a3258f713d17cd8b 308 Pfam PF05971 Protein of unknown function (DUF890) 4 296 7.9E-148 T 28-03-2018 IPR010286 Ribosomal RNA large subunit methyltransferase F-like GO:0008168 CI104_RS08440 3e52eb676dcc0789a3258f713d17cd8b 308 SUPERFAMILY SSF53335 43 295 3.07E-27 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 Gene3D G3DSA:3.20.20.80 90 498 1.2E-59 T 28-03-2018 CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 SUPERFAMILY SSF51445 406 530 8.19E-78 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 SUPERFAMILY SSF51445 53 366 8.19E-78 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 Gene3D G3DSA:2.60.40.1180 508 569 6.7E-4 T 28-03-2018 CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 SMART SM00642 57 410 1.8E-6 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 Pfam PF00128 Alpha amylase, catalytic domain 93 347 7.6E-20 T 28-03-2018 IPR006047 Glycosyl hydrolase, family 13, catalytic domain GO:0003824|GO:0005975 CI104_RS13970 e46fa35b6a430cb67449901fd0e1a838 569 PIRSF PIRSF003059 11 569 8.1E-202 T 28-03-2018 IPR016377 Sucrose phosphorylase-related GO:0005985|GO:0009018 KEGG: 00500+2.4.1.7|MetaCyc: PWY-5384 CI104_RS12385 a77053afaabe250ebf4de081aa7dcb8e 115 TIGRFAM TIGR00365 TIGR00365: monothiol glutaredoxin, Grx4 family 5 101 7.0E-47 T 28-03-2018 IPR004480 Monothiol glutaredoxin-related CI104_RS12385 a77053afaabe250ebf4de081aa7dcb8e 115 Pfam PF00462 Glutaredoxin 17 81 1.1E-18 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CI104_RS12385 a77053afaabe250ebf4de081aa7dcb8e 115 SUPERFAMILY SSF52833 2 104 1.22E-35 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS12385 a77053afaabe250ebf4de081aa7dcb8e 115 PIRSF PIRSF005894 1 108 2.4E-52 T 28-03-2018 IPR014434 Monothiol glutaredoxin GO:0015036 Reactome: R-HSA-1362409 CI104_RS12385 a77053afaabe250ebf4de081aa7dcb8e 115 Gene3D G3DSA:3.40.30.10 3 115 6.2E-31 T 28-03-2018 CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 Gene3D G3DSA:1.20.1250.20 259 482 1.6E-10 T 28-03-2018 CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 Hamap MF_01879 Dipeptide and tripeptide permease B [dtpB]. 3 486 45.731 T 28-03-2018 IPR023778 Amino acid/peptide transporter family, dipeptide/tripeptide permease B CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 SUPERFAMILY SSF103473 245 480 1.48E-22 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 SUPERFAMILY SSF103473 12 208 1.48E-22 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 ProSitePatterns PS01023 PTR2 family proton/oligopeptide symporters signature 2. 145 157 - T 28-03-2018 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site GO:0005215|GO:0006857|GO:0016020 Reactome: R-HSA-427975 CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 Gene3D G3DSA:1.20.1250.20 2 196 1.7E-22 T 28-03-2018 CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 Pfam PF00854 POT family 82 443 3.2E-94 T 28-03-2018 IPR000109 Proton-dependent oligopeptide transporter family GO:0005215|GO:0006810|GO:0016020 Reactome: R-HSA-427975 CI104_RS01175 91fec7a9387dd33c2f41d530e63f32a5 490 TIGRFAM TIGR00924 yjdL_sub1_fam: amino acid/peptide transporter (Peptide:H+ symporter) 9 483 2.1E-189 T 28-03-2018 IPR005279 Dipeptide/tripeptide permease GO:0015197|GO:0015833|GO:0016020 CI104_RS22260 b51b23dcdf29a0fc98501f36196a21dc 333 Gene3D G3DSA:1.10.3470.10 31 310 7.7E-29 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS22260 b51b23dcdf29a0fc98501f36196a21dc 333 Pfam PF02653 Branched-chain amino acid transport system / permease component 35 304 5.9E-42 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS18640 fd994335c62c72066d2a72125c2d57b2 326 Pfam PF03824 High-affinity nickel-transport protein 186 317 2.9E-19 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CI104_RS18640 fd994335c62c72066d2a72125c2d57b2 326 Pfam PF03824 High-affinity nickel-transport protein 73 182 2.1E-22 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 ProSitePatterns PS00462 Gamma-glutamyltranspeptidase signature. 392 416 - T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 TIGRFAM TIGR00066 g_glut_trans: gamma-glutamyltransferase 50 572 1.1E-231 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 Pfam PF01019 Gamma-glutamyltranspeptidase 65 573 5.0E-192 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 SUPERFAMILY SSF56235 42 573 5.02E-199 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 392 410 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 481 498 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 262 278 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 72 97 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 292 311 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 163 182 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 457 472 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 145 163 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS01500 4e16c5631324c22899f125ae51469557 581 PRINTS PR01210 Gamma-glutamyltranspeptidase signature 416 434 2.9E-81 T 28-03-2018 IPR000101 Gamma-glutamyltranspeptidase GO:0006751|GO:0036374 KEGG: 00430+2.3.2.2|KEGG: 00460+2.3.2.2|KEGG: 00480+2.3.2.2+3.4.19.13|MetaCyc: PWY-4041|MetaCyc: PWY-5826 CI104_RS03020 fcb5bfc406f6a75ec045f7a3f3c9ecb2 268 Pfam PF03609 PTS system sorbose-specific iic component 7 238 9.6E-65 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS03020 fcb5bfc406f6a75ec045f7a3f3c9ecb2 268 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 2 267 1.7E-115 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS26755 174afb4fcfc9171296f8d6003095ecb8 286 SUPERFAMILY SSF110710 1 266 3.14E-76 T 28-03-2018 CI104_RS26755 174afb4fcfc9171296f8d6003095ecb8 286 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 23 263 9.6E-59 T 28-03-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 CI104_RS24490 92b8d30bd5987210533471099cf188f4 296 Gene3D G3DSA:2.70.98.10 2 295 6.7E-69 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS24490 92b8d30bd5987210533471099cf188f4 296 Pfam PF01263 Aldose 1-epimerase 8 288 3.6E-50 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CI104_RS24490 92b8d30bd5987210533471099cf188f4 296 SUPERFAMILY SSF74650 9 290 8.79E-63 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 Hamap MF_01559 L-lactate dehydrogenase [lldD]. 1 380 73.792 T 28-03-2018 IPR020920 L-lactate dehydrogenase, bacterial GO:0004457|GO:0006089|GO:0010181|GO:0055114 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 SUPERFAMILY SSF51395 223 375 2.14E-99 T 28-03-2018 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 SUPERFAMILY SSF51395 6 193 2.14E-99 T 28-03-2018 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 Gene3D G3DSA:3.20.20.70 2 379 8.4E-97 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 Pfam PF01070 FMN-dependent dehydrogenase 13 375 2.1E-124 T 28-03-2018 IPR000262 FMN-dependent dehydrogenase GO:0016491 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 PIRSF PIRSF000138 2 379 4.7E-121 T 28-03-2018 IPR012133 Alpha-hydroxy acid dehydrogenase, FMN-dependent GO:0010181|GO:0016491|GO:0055114 CI104_RS00685 82efe7ad0f65b3ac3211c8e46fc7b132 396 ProSitePatterns PS00557 FMN-dependent alpha-hydroxy acid dehydrogenases active site. 273 279 - T 28-03-2018 IPR008259 FMN-dependent alpha-hydroxy acid dehydrogenase, active site GO:0016491|GO:0055114 CI104_RS28485 a4ca77fcd8752c27c41bbbfb2cfb2902 216 Pfam PF10881 Protein of unknown function (DUF2726) 65 177 8.2E-23 T 28-03-2018 IPR024402 Domain of unknown function DUF2726 CI104_RS07935 c73776808ea6901c44990b809dd1886e 139 SUPERFAMILY SSF143744 1 134 3.01E-32 T 28-03-2018 CI104_RS07935 c73776808ea6901c44990b809dd1886e 139 Pfam PF03928 Haem-degrading 4 129 1.5E-28 T 28-03-2018 IPR005624 Haem-degrading CI104_RS21740 68ac72d1c3f213248d4686a5f8d006fc 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 4.8E-39 T 28-03-2018 IPR009329 Protein of unknown function DUF987 CI104_RS21740 68ac72d1c3f213248d4686a5f8d006fc 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 6.0E-25 T 28-03-2018 IPR009329 Protein of unknown function DUF987 CI104_RS05880 3ceefd732d5212a6b51f8c7b07425c43 91 Gene3D G3DSA:3.30.1660.10 21 89 7.9E-16 T 28-03-2018 IPR025543 Dodecin-like CI104_RS05880 3ceefd732d5212a6b51f8c7b07425c43 91 SUPERFAMILY SSF159871 2 90 3.79E-21 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS05880 3ceefd732d5212a6b51f8c7b07425c43 91 Pfam PF07338 Protein of unknown function (DUF1471) 40 89 1.9E-12 T 28-03-2018 IPR010854 Domain of unknown function DUF1471 CI104_RS14695 bea89005d9686fea824dde121d289fc9 142 SUPERFAMILY SSF52402 2 142 9.21E-29 T 28-03-2018 CI104_RS14695 bea89005d9686fea824dde121d289fc9 142 PRINTS PR01438 Universal stress protein signature 120 142 6.6E-15 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS14695 bea89005d9686fea824dde121d289fc9 142 PRINTS PR01438 Universal stress protein signature 2 20 6.6E-15 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS14695 bea89005d9686fea824dde121d289fc9 142 PRINTS PR01438 Universal stress protein signature 103 115 6.6E-15 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS14695 bea89005d9686fea824dde121d289fc9 142 Pfam PF00582 Universal stress protein family 1 142 2.7E-24 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS14695 bea89005d9686fea824dde121d289fc9 142 Gene3D G3DSA:3.40.50.620 2 142 2.2E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS04885 266ea3bd63cca29ed4bf3ce7093c056d 360 Pfam PF00953 Glycosyl transferase family 4 99 284 6.3E-34 T 28-03-2018 IPR000715 Glycosyl transferase, family 4 GO:0008963|GO:0016021 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471|Reactome: R-HSA-446193 CI104_RS04885 266ea3bd63cca29ed4bf3ce7093c056d 360 Pfam PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 68 80 9.3E-6 T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS04885 266ea3bd63cca29ed4bf3ce7093c056d 360 Hamap MF_00038 Phospho-N-acetylmuramoyl-pentapeptide-transferase [mraY]. 25 358 25.882 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS04885 266ea3bd63cca29ed4bf3ce7093c056d 360 ProSitePatterns PS01347 MraY family signature 1. 68 80 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS04885 266ea3bd63cca29ed4bf3ce7093c056d 360 ProSitePatterns PS01348 MraY family signature 2. 189 200 - T 28-03-2018 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS04885 266ea3bd63cca29ed4bf3ce7093c056d 360 TIGRFAM TIGR00445 mraY: phospho-N-acetylmuramoyl-pentapeptide-transferase 37 360 2.0E-162 T 28-03-2018 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase GO:0008963|GO:0016020 KEGG: 00550+2.7.8.13|MetaCyc: PWY-5265|MetaCyc: PWY-6470|MetaCyc: PWY-6471 CI104_RS21595 6c1fa0064e07a1d72d2c9036a4d1131b 173 Gene3D G3DSA:2.20.110.10 38 165 9.9E-15 T 28-03-2018 CI104_RS21595 6c1fa0064e07a1d72d2c9036a4d1131b 173 SUPERFAMILY SSF82185 38 154 8.5E-24 T 28-03-2018 CI104_RS21595 6c1fa0064e07a1d72d2c9036a4d1131b 173 Pfam PF07661 MORN repeat variant 46 66 0.014 T 28-03-2018 IPR011652 MORN variant CI104_RS21595 6c1fa0064e07a1d72d2c9036a4d1131b 173 Pfam PF07661 MORN repeat variant 94 114 0.012 T 28-03-2018 IPR011652 MORN variant CI104_RS12505 384e1f6202ca623cf045fd7c6c939c9a 352 TIGRFAM TIGR01946 rnfD: electron transport complex, RnfABCDGE type, D subunit 8 349 3.4E-146 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CI104_RS12505 384e1f6202ca623cf045fd7c6c939c9a 352 Pfam PF03116 NQR2, RnfD, RnfE family 6 348 6.9E-107 T 28-03-2018 IPR004338 NADH-quinone reductase NQR2/RnfD GO:0006810|GO:0016020 CI104_RS12505 384e1f6202ca623cf045fd7c6c939c9a 352 Hamap MF_00462 Electron transport complex subunit RsxD [rsxD]. 3 350 28.746 T 28-03-2018 IPR011303 Electron transport complex, subunit RnfD/RsxD GO:0016021|GO:0022900 CI104_RS01845 a0cde4e27e176bae69a40736b6625587 445 PIRSF PIRSF006060 1 443 2.5E-89 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS01845 a0cde4e27e176bae69a40736b6625587 445 Pfam PF13520 Amino acid permease 10 410 4.6E-60 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS24865 bda0371ac1502d1818a7e8851bbd1d8f 461 ProSitePatterns PS00218 Amino acid permeases signature. 41 71 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS24865 bda0371ac1502d1818a7e8851bbd1d8f 461 Pfam PF00324 Amino acid permease 16 445 6.4E-102 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS24865 bda0371ac1502d1818a7e8851bbd1d8f 461 PIRSF PIRSF006060 1 458 3.2E-64 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS01665 d521386b361565923a8495686e2b2cfa 438 Pfam PF02447 GntP family permease 1 434 7.7E-186 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS01665 d521386b361565923a8495686e2b2cfa 438 PIRSF PIRSF002746 1 438 8.0E-159 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS01665 d521386b361565923a8495686e2b2cfa 438 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 1.1E-200 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS14365 ef63112ce1f6125e78c5cfcf10238d88 463 TIGRFAM TIGR00886 2A0108: nitrite transporter 36 418 8.9E-115 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CI104_RS14365 ef63112ce1f6125e78c5cfcf10238d88 463 SUPERFAMILY SSF103473 20 461 1.7E-35 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS14365 ef63112ce1f6125e78c5cfcf10238d88 463 Gene3D G3DSA:1.20.1250.20 21 238 7.2E-14 T 28-03-2018 CI104_RS14365 ef63112ce1f6125e78c5cfcf10238d88 463 Gene3D G3DSA:1.20.1250.20 244 463 1.8E-21 T 28-03-2018 CI104_RS14365 ef63112ce1f6125e78c5cfcf10238d88 463 Pfam PF07690 Major Facilitator Superfamily 45 422 1.9E-13 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS25215 4748b7b8653378d967949ed2ed678182 296 Gene3D G3DSA:1.10.3720.10 16 287 1.6E-36 T 28-03-2018 CI104_RS25215 4748b7b8653378d967949ed2ed678182 296 SUPERFAMILY SSF161098 35 286 1.57E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS25215 4748b7b8653378d967949ed2ed678182 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 101 290 6.6E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS25215 4748b7b8653378d967949ed2ed678182 296 TIGRFAM TIGR00974 3a0107s02c: phosphate ABC transporter, permease protein PstA 28 292 3.9E-85 T 28-03-2018 IPR005672 Phosphate transport system permease protein PstA GO:0005315|GO:0005887|GO:0035435 CI104_RS04895 715f0bec288db3031c2ae7065cbc0efe 414 Pfam PF01098 Cell cycle protein 48 402 1.4E-128 T 28-03-2018 IPR001182 Probable peptidoglycan glycosyltransferase FtsW/RodA GO:0016021|GO:0051301 CI104_RS04895 715f0bec288db3031c2ae7065cbc0efe 414 Hamap MF_00913 Putative lipid II flippase FtsW [ftsW]. 43 410 42.102 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CI104_RS04895 715f0bec288db3031c2ae7065cbc0efe 414 ProSitePatterns PS00428 Cell cycle proteins ftsW / rodA / spoVE signature. 359 383 - T 28-03-2018 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site GO:0007049|GO:0016021 CI104_RS04895 715f0bec288db3031c2ae7065cbc0efe 414 TIGRFAM TIGR02614 ftsW: cell division protein FtsW 45 400 1.5E-134 T 28-03-2018 IPR013437 Cell division protein FtsW GO:0009252|GO:0016021|GO:0051301 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 452 468 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 314 331 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 530 543 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 346 363 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 207 225 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 281 298 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 PRINTS PR00744 Glycosyl hydrolase family 37 signature 389 405 6.9E-46 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 Hamap MF_01059 Cytoplasmic trehalase [treF]. 34 549 80.219 T 28-03-2018 IPR023715 Trehalase, cytoplasmic GO:0004555|GO:0005737|GO:0005993|GO:0071474 KEGG: 00500+3.2.1.28 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 Pfam PF01204 Trehalase 70 546 1.9E-163 T 28-03-2018 IPR001661 Glycoside hydrolase, family 37 GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 ProSitePatterns PS00928 Trehalase signature 2. 459 468 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 SUPERFAMILY SSF48208 55 547 3.4E-148 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 ProSitePatterns PS00927 Trehalase signature 1. 165 178 - T 28-03-2018 IPR018232 Glycoside hydrolase, family 37, conserved site GO:0004555|GO:0005991 KEGG: 00500+3.2.1.28|Reactome: R-HSA-189085 CI104_RS01145 e946ea06b1e454e0188a4a4b353e3e5e 549 Gene3D G3DSA:1.50.10.10 56 549 1.5E-135 T 28-03-2018 CI104_RS23435 b6a9bdeef5a41c25cd13d6aa361d001a 296 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 111 289 3.8E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS23435 b6a9bdeef5a41c25cd13d6aa361d001a 296 SUPERFAMILY SSF161098 8 296 1.4E-68 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS23435 b6a9bdeef5a41c25cd13d6aa361d001a 296 Gene3D G3DSA:1.10.3720.10 1 283 1.1E-42 T 28-03-2018 CI104_RS00930 50701448b9b22599f732987538616e4a 146 SUPERFAMILY SSF55729 1 138 5.59E-23 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS00930 50701448b9b22599f732987538616e4a 146 Gene3D G3DSA:3.40.630.30 1 144 7.3E-21 T 28-03-2018 CI104_RS00930 50701448b9b22599f732987538616e4a 146 Pfam PF13673 Acetyltransferase (GNAT) domain 45 125 2.4E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS07025 d60a56f727b4961d26ca5bd831ea914b 70 Gene3D G3DSA:3.10.290.10 1 70 1.4E-12 T 28-03-2018 IPR002942 RNA-binding S4 domain GO:0003723 Reactome: R-HSA-6791226 CI104_RS07025 d60a56f727b4961d26ca5bd831ea914b 70 Pfam PF13275 S4 domain 9 68 1.1E-24 T 28-03-2018 CI104_RS07025 d60a56f727b4961d26ca5bd831ea914b 70 SUPERFAMILY SSF55174 7 68 8.11E-20 T 28-03-2018 CI104_RS20715 81be592cb8942976cba1bb5206167840 174 SMART SM00421 101 158 6.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20715 81be592cb8942976cba1bb5206167840 174 Gene3D G3DSA:1.10.10.10 34 166 3.4E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20715 81be592cb8942976cba1bb5206167840 174 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 104 118 1.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20715 81be592cb8942976cba1bb5206167840 174 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 118 134 1.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20715 81be592cb8942976cba1bb5206167840 174 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 134 146 1.0E-6 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20715 81be592cb8942976cba1bb5206167840 174 Pfam PF00196 Bacterial regulatory proteins, luxR family 103 156 1.4E-10 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS20715 81be592cb8942976cba1bb5206167840 174 SUPERFAMILY SSF46894 95 161 1.56E-12 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS10150 c64967256a5aab30e7247b68dfc3d247 75 Pfam PF13993 YccJ-like protein 9 75 2.0E-38 T 28-03-2018 IPR025600 YccJ-like protein CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 PIRSF PIRSF000094 1 260 3.2E-125 T 28-03-2018 IPR014358 Enoyl-[acyl-carrier-protein] reductase (NADH) GO:0004318|GO:0006633|GO:0055114 KEGG: 00061+1.3.1.9|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 15 252 1.7E-86 T 28-03-2018 CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 Gene3D G3DSA:3.40.50.720 3 261 1.1E-44 T 28-03-2018 CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 180 197 1.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 8 25 1.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 215 235 1.6E-7 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS14025 3ca5447669ebd189ad01d42cad3f9888 262 SUPERFAMILY SSF51735 6 253 3.31E-63 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS03200 7f5d184a4f80e2038bcabd73ff9c13c6 123 Pfam PF05656 Protein of unknown function (DUF805) 11 117 1.8E-35 T 28-03-2018 IPR008523 Protein of unknown function DUF805 GO:0016021 CI104_RS15915 c98adb704dba449d521f55382f7ef57e 80 Hamap MF_01549 Protein DsrB [dsrB]. 19 80 29.424 T 28-03-2018 IPR019717 Dextransucrase DSRB CI104_RS15915 c98adb704dba449d521f55382f7ef57e 80 Pfam PF10781 Dextransucrase DSRB 19 78 1.3E-35 T 28-03-2018 IPR019717 Dextransucrase DSRB CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 Pfam PF01555 DNA methylase 34 250 2.3E-52 T 28-03-2018 IPR002941 DNA methylase N-4/N-6 GO:0003677|GO:0006306|GO:0008170 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 37 43 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 Gene3D G3DSA:3.40.50.150 11 293 5.5E-63 T 28-03-2018 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 195 212 4.5E-38 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 214 232 4.5E-38 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 68 88 4.5E-38 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 237 257 4.5E-38 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 PRINTS PR00508 S21 class N4 adenine-specific DNA methyltransferase signature 33 47 4.5E-38 T 28-03-2018 IPR001091 Restriction/modification DNA-methylase GO:0003677|GO:0006306|GO:0008170 CI104_RS02345 9a0a2ec0d0ab0a8420801aba0a6fe14c 294 SUPERFAMILY SSF53335 13 257 1.04E-62 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS17295 5116022e925262f6c0dd81ec3849e02c 173 PIRSF PIRSF038321 1 173 2.8E-67 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CI104_RS17295 5116022e925262f6c0dd81ec3849e02c 173 Pfam PF03608 PTS system enzyme II sorbitol-specific factor 2 168 4.2E-63 T 28-03-2018 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor GO:0009401|GO:0016021 CI104_RS04735 9d80e9fe6fdc07c537c54a4b0990876c 784 Pfam PF03968 OstA-like protein 53 194 5.6E-29 T 28-03-2018 IPR005653 Organic solvent tolerance-like, N-terminal CI104_RS04735 9d80e9fe6fdc07c537c54a4b0990876c 784 Gene3D G3DSA:2.60.450.10 44 208 8.4E-17 T 28-03-2018 CI104_RS04735 9d80e9fe6fdc07c537c54a4b0990876c 784 Pfam PF04453 Organic solvent tolerance protein 309 697 2.7E-111 T 28-03-2018 IPR007543 Organic solvent tolerance protein, C-terminal GO:0010033|GO:0019867|GO:0061024 CI104_RS04735 9d80e9fe6fdc07c537c54a4b0990876c 784 Hamap MF_01411 LPS-assembly protein LptD [lptD]. 14 763 21.474 T 28-03-2018 IPR020889 LPS-assembly protein LptD GO:0009279|GO:0010033|GO:0015920|GO:0043165 CI104_RS12750 4bfde92e03b4978111891f6a237d0060 108 Hamap MF_00010 UPF0060 membrane protein YnfA [ynfA]. 2 106 22.374 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CI104_RS12750 4bfde92e03b4978111891f6a237d0060 108 Pfam PF02694 Uncharacterised BCR, YnfA/UPF0060 family 1 107 1.5E-46 T 28-03-2018 IPR003844 Uncharacterised protein family UPF0060 GO:0016020 CI104_RS12750 4bfde92e03b4978111891f6a237d0060 108 SUPERFAMILY SSF103481 7 105 6.54E-6 T 28-03-2018 CI104_RS02225 524ed652bb886bd459718c204ca9243f 157 Pfam PF04361 Protein of unknown function (DUF494) 1 157 2.3E-59 T 28-03-2018 IPR007456 Smg CI104_RS02225 524ed652bb886bd459718c204ca9243f 157 Hamap MF_00598 Protein Smg [smg]. 1 157 33.641 T 28-03-2018 IPR007456 Smg CI104_RS20515 b9622944f976e4cf57c3baf9430f60e4 850 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 303 313 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CI104_RS20515 b9622944f976e4cf57c3baf9430f60e4 850 SUPERFAMILY SSF141729 25 148 3.01E-20 T 28-03-2018 CI104_RS20515 b9622944f976e4cf57c3baf9430f60e4 850 Pfam PF00577 Outer membrane usher protein 189 760 9.8E-139 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS20515 b9622944f976e4cf57c3baf9430f60e4 850 Pfam PF13953 PapC C-terminal domain 769 834 2.7E-21 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS20515 b9622944f976e4cf57c3baf9430f60e4 850 Pfam PF13954 PapC N-terminal domain 27 170 2.0E-30 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS09090 5e02e983811b09085a2afb3db0e7fa2f 259 Pfam PF02698 DUF218 domain 81 216 1.6E-28 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CI104_RS09090 5e02e983811b09085a2afb3db0e7fa2f 259 Gene3D G3DSA:3.40.50.620 71 213 1.2E-28 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS02175 5570f7f183ec92da3d453fe59dfdc07f 128 ProSitePatterns PS01167 Ribosomal protein L17 signature. 34 56 - T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02175 5570f7f183ec92da3d453fe59dfdc07f 128 SUPERFAMILY SSF64263 1 118 3.53E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02175 5570f7f183ec92da3d453fe59dfdc07f 128 Gene3D G3DSA:3.90.1030.10 1 117 3.2E-50 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02175 5570f7f183ec92da3d453fe59dfdc07f 128 Hamap MF_01368 50S ribosomal protein L17 [rplQ]. 5 116 27.022 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02175 5570f7f183ec92da3d453fe59dfdc07f 128 Pfam PF01196 Ribosomal protein L17 20 116 1.3E-34 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02175 5570f7f183ec92da3d453fe59dfdc07f 128 TIGRFAM TIGR00059 L17: ribosomal protein bL17 7 117 6.9E-51 T 28-03-2018 IPR000456 Ribosomal protein L17 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 40 61 2.5E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 131 148 2.5E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 74 92 2.5E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 PRINTS PR00146 Dihydrodipicolinate synthase signature 106 122 2.5E-11 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 SUPERFAMILY SSF51569 9 294 1.15E-69 T 28-03-2018 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 SMART SM01130 6 295 5.2E-71 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 Pfam PF00701 Dihydrodipicolinate synthetase family 7 265 1.8E-50 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 PIRSF PIRSF001365 2 296 6.9E-66 T 28-03-2018 IPR002220 DapA-like GO:0008152|GO:0016829 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 Gene3D G3DSA:3.20.20.70 2 296 5.2E-74 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS24240 9aeb306364d3a98856168f606d617367 296 ProSitePatterns PS00666 Dihydrodipicolinate synthase signature 2. 136 167 - T 28-03-2018 IPR020625 Schiff base-forming aldolase, active site GO:0008152|GO:0016829 KEGG: 00261+4.3.3.7|KEGG: 00300+4.3.3.7|MetaCyc: PWY-2941|MetaCyc: PWY-2942|MetaCyc: PWY-5097|Reactome: R-HSA-389661 CI104_RS04130 e64447209c97f598182ac2801a244cb5 418 Hamap MF_02049 Nucleoside permease NupG [nupG]. 1 417 48.873 T 28-03-2018 IPR033667 Nucleoside permease NupG GO:0005887|GO:1901642 CI104_RS04130 e64447209c97f598182ac2801a244cb5 418 Pfam PF03825 Nucleoside H+ symporter 1 406 6.5E-182 T 28-03-2018 CI104_RS04130 e64447209c97f598182ac2801a244cb5 418 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 418 5.6E-216 T 28-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CI104_RS04130 e64447209c97f598182ac2801a244cb5 418 Gene3D G3DSA:1.20.1250.20 5 194 8.1E-8 T 28-03-2018 CI104_RS04130 e64447209c97f598182ac2801a244cb5 418 Gene3D G3DSA:1.20.1250.20 195 410 4.4E-20 T 28-03-2018 CI104_RS04130 e64447209c97f598182ac2801a244cb5 418 SUPERFAMILY SSF103473 9 406 5.23E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS01180 5c3e9984919757f7cc69deb288ba224a 144 PIRSF PIRSF006276 1 141 4.1E-54 T 28-03-2018 IPR006015 Universal stress protein A CI104_RS01180 5c3e9984919757f7cc69deb288ba224a 144 Pfam PF00582 Universal stress protein family 3 138 2.5E-21 T 28-03-2018 IPR006016 UspA GO:0006950 CI104_RS01180 5c3e9984919757f7cc69deb288ba224a 144 Gene3D G3DSA:3.40.50.620 2 142 1.4E-26 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS01180 5c3e9984919757f7cc69deb288ba224a 144 SUPERFAMILY SSF52402 3 139 1.59E-32 T 28-03-2018 CI104_RS23525 2288b77cda7331bd9581b80eb3b30c3f 90 ProDom PD063639 YJBD CYTOPLASMIC STY4411 YPO2363 ECS5006 Y1969 3 90 2.0E-31 T 28-03-2018 IPR020317 Uncharacterised protein family YjbD CI104_RS23525 2288b77cda7331bd9581b80eb3b30c3f 90 Pfam PF11656 YjbD family (DUF3811) 3 90 2.6E-38 T 28-03-2018 IPR020317 Uncharacterised protein family YjbD CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 241 306 1.3E-18 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 SUPERFAMILY SSF52540 13 261 5.44E-73 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 240 324 1.8E-25 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 SMART SM00382 47 239 4.4E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 ProSitePatterns PS00211 ABC transporters family signature. 162 176 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 Gene3D G3DSA:3.40.50.300 9 336 2.8E-79 T 28-03-2018 CI104_RS01010 08930aa21faa9d458c4ec8edb21ef6bb 337 Pfam PF00005 ABC transporter 38 189 1.3E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS14275 be0da7d9f7e3f9c0fe4bf01fea1afc58 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 112 306 3.8E-39 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14275 be0da7d9f7e3f9c0fe4bf01fea1afc58 306 SUPERFAMILY SSF161098 88 291 9.92E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14275 be0da7d9f7e3f9c0fe4bf01fea1afc58 306 Gene3D G3DSA:1.10.3720.10 2 294 9.6E-42 T 28-03-2018 CI104_RS03225 c08376936550011a6173bee9677c6732 101 Gene3D G3DSA:1.20.5.1230 3 88 1.2E-4 T 28-03-2018 CI104_RS03225 c08376936550011a6173bee9677c6732 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 6.0E-32 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CI104_RS06755 79a06b2b8f048dc5f1473209fb204316 89 ProDom PD068655 ORF26 3'REGION LYS GENE PRECURSOR ORF30 SIGNAL PHAGE 7 88 4.0E-20 T 28-03-2018 IPR024406 Phage tail assembly chaperone TAC_10 CI104_RS06755 79a06b2b8f048dc5f1473209fb204316 89 Pfam PF10963 Phage tail assembly chaperone 7 89 5.7E-30 T 28-03-2018 IPR024406 Phage tail assembly chaperone TAC_10 CI104_RS06755 79a06b2b8f048dc5f1473209fb204316 89 Gene3D G3DSA:3.30.2220.10 3 88 2.3E-20 T 28-03-2018 CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 Gene3D G3DSA:3.20.20.120 163 381 6.5E-61 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 SUPERFAMILY SSF54826 27 157 7.96E-26 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 SMART SM00922 176 273 4.3E-27 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 60 156 5.3E-13 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 Gene3D G3DSA:3.30.390.10 21 162 2.0E-28 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 Pfam PF13378 Enolase C-terminal domain-like 187 383 7.6E-60 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 223 254 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS13290 195d4bfde96ed9cd656e4324f0479bd8 398 SUPERFAMILY SSF51604 144 385 6.16E-71 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS05610 130eb5ece1d51c862b0367fecaa7fd51 161 Pfam PF05638 Type VI secretion system effector, Hcp 6 136 5.4E-39 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS05610 130eb5ece1d51c862b0367fecaa7fd51 161 TIGRFAM TIGR03344 VI_effect_Hcp1: type VI secretion system effector, Hcp1 family 1 143 1.9E-17 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS05610 130eb5ece1d51c862b0367fecaa7fd51 161 SUPERFAMILY SSF141452 2 160 1.57E-51 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS05610 130eb5ece1d51c862b0367fecaa7fd51 161 Gene3D G3DSA:2.30.110.20 1 161 7.2E-49 T 28-03-2018 IPR008514 Type VI secretion system effector, Hcp CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 SUPERFAMILY SSF53335 406 557 2.16E-16 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 Pfam PF13708 Domain of unknown function (DUF4942) 96 291 2.7E-22 T 28-03-2018 IPR031339 Domain of unknown function DUF4942 CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 492 516 1.1E-6 T 28-03-2018 CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 423 437 1.1E-6 T 28-03-2018 CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 480 492 1.1E-6 T 28-03-2018 CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 483 489 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 Pfam PF05175 Methyltransferase small domain 475 531 5.4E-5 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS27135 1e01f43839d71605cc954e0eaca783bf 563 Gene3D G3DSA:3.40.50.150 97 562 7.1E-10 T 28-03-2018 CI104_RS01960 11523538c3d555dc27bee831754292fd 66 TIGRFAM TIGR02443 TIGR02443: conserved hypothetical protein 3 60 7.8E-32 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CI104_RS01960 11523538c3d555dc27bee831754292fd 66 Gene3D G3DSA:2.20.25.10 10 51 1.5E-4 T 28-03-2018 CI104_RS01960 11523538c3d555dc27bee831754292fd 66 Pfam PF09526 Probable metal-binding protein (DUF2387) 4 57 2.7E-18 T 28-03-2018 IPR012658 Conserved hypothetical protein CHP02443 CI104_RS09420 8dfd44017594a6e6459e25c263744553 77 Gene3D G3DSA:3.30.910.10 1 76 3.2E-30 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS09420 8dfd44017594a6e6459e25c263744553 77 Pfam PF06183 DinI-like family 14 76 4.7E-25 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS09420 8dfd44017594a6e6459e25c263744553 77 SUPERFAMILY SSF54857 1 77 3.92E-25 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Pfam PF06826 Predicted Permease Membrane Region 11 179 1.4E-41 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Pfam PF06826 Predicted Permease Membrane Region 374 546 1.8E-47 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Gene3D G3DSA:3.30.70.1450 192 279 9.4E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 379 533 2.6E-49 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 TIGRFAM TIGR01625 YidE_YbjL_dupl: AspT/YidE/YbjL antiporter duplication domain 16 166 2.3E-38 T 28-03-2018 IPR006512 YidE/YbjL duplication CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Hamap MF_01016 Putative transport protein YidE [yidE]. 1 553 57.465 T 28-03-2018 IPR023018 Transport protein YidE, putative CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 SUPERFAMILY SSF116726 285 360 6.28E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Gene3D G3DSA:3.30.70.1450 280 366 2.5E-13 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 SUPERFAMILY SSF116726 205 271 1.44E-8 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Pfam PF02080 TrkA-C domain 291 358 1.6E-9 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS00085 893b87c329387e386da60ddbc0bd371a 553 Pfam PF02080 TrkA-C domain 212 272 2.5E-6 T 28-03-2018 IPR006037 Regulator of K+ conductance, C-terminal GO:0006813|GO:0008324 CI104_RS05630 a20d99d33585334e0a6d0f4b1634b709 122 Pfam PF10908 Protein of unknown function (DUF2778) 24 103 4.3E-11 T 28-03-2018 IPR021225 Protein of unknown function DUF2778 CI104_RS16775 443c3692ce05aa1bdb40acdf385103c9 315 Pfam PF00768 D-alanyl-D-alanine carboxypeptidase 31 261 1.6E-87 T 28-03-2018 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal GO:0006508|GO:0009002 CI104_RS16775 443c3692ce05aa1bdb40acdf385103c9 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 116 133 5.2E-14 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS16775 443c3692ce05aa1bdb40acdf385103c9 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 143 156 5.2E-14 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS16775 443c3692ce05aa1bdb40acdf385103c9 315 PRINTS PR00725 D-Ala-D-Ala carboxypeptidase 1 (S11) family signature 66 77 5.2E-14 T 28-03-2018 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A GO:0006508|GO:0009002 CI104_RS16775 443c3692ce05aa1bdb40acdf385103c9 315 SUPERFAMILY SSF56601 3 277 6.96E-61 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS16775 443c3692ce05aa1bdb40acdf385103c9 315 Gene3D G3DSA:3.40.710.10 16 314 1.1E-43 T 28-03-2018 CI104_RS24400 3fed77186f50faeb946a5b8800f57518 211 TIGRFAM TIGR01583 formate-DH-gamm: formate dehydrogenase, gamma subunit 7 204 2.3E-66 T 28-03-2018 IPR006471 Formate dehydrogenase, gamma subunit GO:0008863|GO:0009326|GO:0016021|GO:0045333 CI104_RS24400 3fed77186f50faeb946a5b8800f57518 211 SUPERFAMILY SSF81342 3 206 4.57E-56 T 28-03-2018 IPR016174 Di-haem cytochrome, transmembrane GO:0016020|GO:0022904 Reactome: R-HSA-611105 CI104_RS24400 3fed77186f50faeb946a5b8800f57518 211 Gene3D G3DSA:1.20.950.20 1 211 1.9E-54 T 28-03-2018 CI104_RS24400 3fed77186f50faeb946a5b8800f57518 211 Pfam PF01292 Prokaryotic cytochrome b561 9 184 2.2E-22 T 28-03-2018 IPR011577 Cytochrome b561, bacterial/Ni-hydrogenase GO:0009055|GO:0016021 CI104_RS17030 1252e681c3c63fca4ae3cc2a1b2a9e37 341 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 158 338 1.2E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17030 1252e681c3c63fca4ae3cc2a1b2a9e37 341 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 9 46 6.3E-6 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CI104_RS17030 1252e681c3c63fca4ae3cc2a1b2a9e37 341 SUPERFAMILY SSF161098 135 321 1.28E-18 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17030 1252e681c3c63fca4ae3cc2a1b2a9e37 341 Gene3D G3DSA:1.10.3720.10 10 328 1.4E-40 T 28-03-2018 CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 Gene3D G3DSA:3.30.70.260 257 339 1.6E-19 T 28-03-2018 CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 SMART SM00930 262 337 2.9E-21 T 28-03-2018 IPR018449 NIL domain CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 SMART SM00382 30 218 8.6E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 ProSitePatterns PS00211 ABC transporters family signature. 141 155 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 Gene3D G3DSA:3.40.50.300 1 256 2.0E-78 T 28-03-2018 CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 Pfam PF09383 NIL domain 264 336 1.0E-16 T 28-03-2018 IPR018449 NIL domain CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 SUPERFAMILY SSF55021 254 339 5.04E-18 T 28-03-2018 CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 Pfam PF00005 ABC transporter 21 169 1.0E-37 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS12180 a70aecca6341c8bdd28be61401d9d35e 340 SUPERFAMILY SSF52540 1 240 7.79E-83 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04425 ed937bd2b746ed6be71cb8c8bb50eadc 157 Pfam PF05981 CreA protein 24 155 1.7E-57 T 28-03-2018 IPR010292 Uncharacterised protein family CreA CI104_RS04425 ed937bd2b746ed6be71cb8c8bb50eadc 157 PIRSF PIRSF003174 1 157 2.9E-68 T 28-03-2018 IPR010292 Uncharacterised protein family CreA CI104_RS22215 ce800944be14aed4164901fe355aa4f2 450 Gene3D G3DSA:3.30.2290.10 10 236 1.3E-59 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CI104_RS22215 ce800944be14aed4164901fe355aa4f2 450 SUPERFAMILY SSF111283 17 449 7.98E-132 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CI104_RS22215 ce800944be14aed4164901fe355aa4f2 450 Pfam PF01523 Putative modulator of DNA gyrase 36 326 9.4E-61 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CI104_RS23925 09df7759d22aec2f83eb16191d3bb862 350 Pfam PF02653 Branched-chain amino acid transport system / permease component 42 316 4.6E-25 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS23925 09df7759d22aec2f83eb16191d3bb862 350 Gene3D G3DSA:1.10.3470.10 17 322 6.5E-17 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS05415 5acba8057f8cce97bc56dc6af89c5144 232 Pfam PF04170 NlpE N-terminal domain 44 128 5.0E-26 T 28-03-2018 IPR007298 Copper resistance lipoprotein NlpE CI104_RS05415 5acba8057f8cce97bc56dc6af89c5144 232 Pfam PF17185 NlpE C-terminal OB domain 142 230 3.1E-33 T 28-03-2018 IPR033450 NlpE, C-terminal OB domain CI104_RS07595 1f5ec93430c021829e69fad115121dc6 246 SUPERFAMILY SSF161098 24 223 7.46E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS07595 1f5ec93430c021829e69fad115121dc6 246 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 23 132 2.4E-15 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS07595 1f5ec93430c021829e69fad115121dc6 246 Gene3D G3DSA:1.10.3720.10 17 239 1.2E-38 T 28-03-2018 CI104_RS07595 1f5ec93430c021829e69fad115121dc6 246 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 47 238 1.5E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS02495 569a5b909e6167b2ce2575996a323ff6 481 PIRSF PIRSF004919 14 481 3.8E-152 T 28-03-2018 IPR025502 TldD CI104_RS02495 569a5b909e6167b2ce2575996a323ff6 481 Gene3D G3DSA:3.30.2290.10 17 240 8.0E-55 T 28-03-2018 IPR035068 Metalloprotease TldD/PmbA, N-terminal domain CI104_RS02495 569a5b909e6167b2ce2575996a323ff6 481 SUPERFAMILY SSF111283 22 480 2.62E-131 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CI104_RS02495 569a5b909e6167b2ce2575996a323ff6 481 Pfam PF01523 Putative modulator of DNA gyrase 35 332 9.6E-67 T 28-03-2018 IPR002510 Metalloprotease TldD/PmbA GO:0006508|GO:0008237 CI104_RS16850 2febeaa22ee56772e6e4cdee269d6e69 239 PIRSF PIRSF005011 1 239 3.2E-154 T 28-03-2018 IPR023604 Uncharacterised protein family SanA CI104_RS16850 2febeaa22ee56772e6e4cdee269d6e69 239 Pfam PF02698 DUF218 domain 48 170 2.4E-17 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CI104_RS16850 2febeaa22ee56772e6e4cdee269d6e69 239 Gene3D G3DSA:3.40.50.620 37 174 1.3E-18 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS16365 5753498ed1426bf92c9200509b7f61cb 196 PIRSF PIRSF000495 1 196 2.1E-63 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CI104_RS16365 5753498ed1426bf92c9200509b7f61cb 196 Hamap MF_00278 Imidazole glycerol phosphate synthase subunit HisH [hisH]. 2 196 33.605 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CI104_RS16365 5753498ed1426bf92c9200509b7f61cb 196 TIGRFAM TIGR01855 IMP_synth_hisH: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit 3 196 1.2E-73 T 28-03-2018 IPR010139 Imidazole glycerol phosphate synthase, subunit H GO:0000105|GO:0005737|GO:0016763 CI104_RS16365 5753498ed1426bf92c9200509b7f61cb 196 Pfam PF00117 Glutamine amidotransferase class-I 39 194 8.5E-18 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS16365 5753498ed1426bf92c9200509b7f61cb 196 Gene3D G3DSA:3.40.50.880 1 196 4.0E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS16365 5753498ed1426bf92c9200509b7f61cb 196 SUPERFAMILY SSF52317 3 195 1.83E-53 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS08835 6467fb0333706787eff5cfd615f77876 372 SUPERFAMILY SSF111369 53 299 5.1E-28 T 28-03-2018 CI104_RS08835 6467fb0333706787eff5cfd615f77876 372 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 41 363 6.0E-58 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS08835 6467fb0333706787eff5cfd615f77876 372 Gene3D G3DSA:1.20.1600.10 29 304 2.3E-35 T 28-03-2018 CI104_RS08835 6467fb0333706787eff5cfd615f77876 372 Pfam PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion 50 295 1.1E-16 T 28-03-2018 IPR032317 RND efflux pump, membrane fusion protein, barrel-sandwich domain CI104_RS00545 ef8dc8a6e75c2b0ba79f030ad2538d2f 356 SUPERFAMILY SSF53756 6 344 2.35E-81 T 28-03-2018 CI104_RS00545 ef8dc8a6e75c2b0ba79f030ad2538d2f 356 TIGRFAM TIGR02201 heptsyl_trn_III: putative lipopolysaccharide heptosyltransferase III 7 344 8.1E-151 T 28-03-2018 IPR011916 Lipopolysaccharide heptosyltransferase III, putative CI104_RS00545 ef8dc8a6e75c2b0ba79f030ad2538d2f 356 Gene3D G3DSA:3.40.50.2000 6 164 1.1E-31 T 28-03-2018 CI104_RS00545 ef8dc8a6e75c2b0ba79f030ad2538d2f 356 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 77 326 1.1E-69 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CI104_RS00545 ef8dc8a6e75c2b0ba79f030ad2538d2f 356 Gene3D G3DSA:3.40.50.2000 165 347 8.2E-43 T 28-03-2018 CI104_RS20215 ce37c60c982ce1ecd22e9c8c2f1848a9 292 SUPERFAMILY SSF103481 184 288 2.62E-7 T 28-03-2018 CI104_RS20215 ce37c60c982ce1ecd22e9c8c2f1848a9 292 Pfam PF00892 EamA-like transporter family 150 282 6.0E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS20215 ce37c60c982ce1ecd22e9c8c2f1848a9 292 Pfam PF00892 EamA-like transporter family 9 139 2.5E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS20215 ce37c60c982ce1ecd22e9c8c2f1848a9 292 SUPERFAMILY SSF103481 41 142 3.27E-13 T 28-03-2018 CI104_RS03620 d79b39ce443f9671a311b31e5f1b7888 930 Gene3D G3DSA:1.20.120.330 5 181 3.1E-4 T 28-03-2018 CI104_RS03620 d79b39ce443f9671a311b31e5f1b7888 930 Gene3D G3DSA:1.10.287.700 640 683 7.7E-4 T 28-03-2018 CI104_RS03620 d79b39ce443f9671a311b31e5f1b7888 930 Gene3D G3DSA:1.10.287.700 693 773 1.9E-8 T 28-03-2018 CI104_RS03620 d79b39ce443f9671a311b31e5f1b7888 930 Pfam PF10145 Phage-related minor tail protein 246 457 3.9E-23 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS03620 d79b39ce443f9671a311b31e5f1b7888 930 TIGRFAM TIGR01760 tape_meas_TP901: phage tail tape measure protein, TP901 family, core region 199 566 1.2E-102 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 SUPERFAMILY SSF52172 2 189 1.24E-28 T 28-03-2018 IPR011006 CheY-like superfamily CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 Pfam PF00486 Transcriptional regulatory protein, C terminal 157 233 8.3E-21 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 SMART SM00862 157 233 2.6E-19 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 SMART SM00448 2 112 1.4E-28 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 Pfam PF00072 Response regulator receiver domain 4 112 8.1E-19 T 28-03-2018 IPR001789 Signal transduction response regulator, receiver domain GO:0000160 CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 Gene3D G3DSA:3.40.50.2300 1 128 6.4E-25 T 28-03-2018 CI104_RS12595 ad7088aca958ad5077fd02e06810a185 248 Gene3D G3DSA:1.10.10.10 129 240 2.5E-27 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS01700 6524b6c67af3ebf426e2ff303d4dc403 75 Pfam PF04023 FeoA domain 10 64 4.6E-7 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CI104_RS01700 6524b6c67af3ebf426e2ff303d4dc403 75 SMART SM00899 1 72 7.3E-7 T 28-03-2018 IPR007167 Ferrous iron transporter FeoA domain GO:0046914 CI104_RS01700 6524b6c67af3ebf426e2ff303d4dc403 75 SUPERFAMILY SSF50037 3 72 1.53E-15 T 28-03-2018 IPR008988 Transcriptional repressor, C-terminal CI104_RS01700 6524b6c67af3ebf426e2ff303d4dc403 75 Gene3D G3DSA:2.30.30.90 1 75 1.8E-12 T 28-03-2018 CI104_RS06245 29fe507faea428643c4d7b62ab05e94d 121 SUPERFAMILY SSF54593 5 120 7.12E-22 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS06245 29fe507faea428643c4d7b62ab05e94d 121 Gene3D G3DSA:3.10.180.10 2 121 1.2E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS06245 29fe507faea428643c4d7b62ab05e94d 121 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 5 115 8.7E-10 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 ProSitePatterns PS00211 ABC transporters family signature. 473 487 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 SMART SM00382 361 547 5.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 SUPERFAMILY SSF90123 7 327 2.22E-71 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 Gene3D G3DSA:3.40.50.300 323 577 2.1E-66 T 28-03-2018 CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 Pfam PF00005 ABC transporter 352 500 1.0E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 Pfam PF00664 ABC transporter transmembrane region 22 291 1.3E-37 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 Gene3D G3DSA:1.20.1560.10 2 322 1.1E-57 T 28-03-2018 CI104_RS06480 63481845c698aff9c2433df2e8c330dd 590 SUPERFAMILY SSF52540 329 572 7.03E-81 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 Gene3D G3DSA:3.30.420.40 9 257 7.7E-64 T 28-03-2018 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 PIRSF PIRSF000538 11 519 5.2E-119 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 Gene3D G3DSA:3.30.420.40 258 515 5.3E-41 T 28-03-2018 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 Hamap MF_02053 Autoinducer-2 kinase [lsrK]. 15 530 76.389 T 28-03-2018 IPR033676 Autoinducer-2 kinase GO:0009372|GO:0071518 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 SUPERFAMILY SSF53067 13 263 1.05E-58 T 28-03-2018 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 301 467 1.7E-17 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 SUPERFAMILY SSF53067 262 512 1.85E-46 T 28-03-2018 CI104_RS21680 d58a0a96053bffb6cc7da196e026a04d 530 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 13 260 6.3E-51 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS02360 ac307eeef2b9e0dfd223b9b46cd26f5a 246 SMART SM01057 25 245 6.7E-104 T 28-03-2018 IPR001148 Alpha carbonic anhydrase CI104_RS02360 ac307eeef2b9e0dfd223b9b46cd26f5a 246 SUPERFAMILY SSF51069 24 244 7.73E-80 T 28-03-2018 IPR001148 Alpha carbonic anhydrase CI104_RS02360 ac307eeef2b9e0dfd223b9b46cd26f5a 246 Pfam PF00194 Eukaryotic-type carbonic anhydrase 24 245 2.0E-53 T 28-03-2018 IPR001148 Alpha carbonic anhydrase CI104_RS02360 ac307eeef2b9e0dfd223b9b46cd26f5a 246 Gene3D G3DSA:3.10.200.10 21 246 1.3E-74 T 28-03-2018 IPR001148 Alpha carbonic anhydrase CI104_RS02360 ac307eeef2b9e0dfd223b9b46cd26f5a 246 ProSitePatterns PS00162 Alpha-carbonic anhydrases signature. 116 132 - T 28-03-2018 IPR018338 Carbonic anhydrase, alpha-class, conserved site GO:0004089|GO:0006730|GO:0008270 KEGG: 00910+4.2.1.1|MetaCyc: PWY-241|MetaCyc: PWY-5743|MetaCyc: PWY-5744|MetaCyc: PWY-5789|MetaCyc: PWY-6142|MetaCyc: PWY-7115|MetaCyc: PWY-7117|Reactome: R-HSA-1475029 CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 Pfam PF00462 Glutaredoxin 4 63 4.0E-24 T 28-03-2018 IPR002109 Glutaredoxin GO:0009055|GO:0015035|GO:0045454 CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 ProSitePatterns PS00195 Glutaredoxin active site. 6 22 - T 28-03-2018 IPR011767 Glutaredoxin active site GO:0009055|GO:0045454 Reactome: R-HSA-499943 CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 SUPERFAMILY SSF52833 1 82 1.2E-28 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 TIGRFAM TIGR02181 GRX_bact: glutaredoxin 3 4 82 1.9E-36 T 28-03-2018 IPR011900 Glutaredoxin, GrxC GO:0045454 CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 PRINTS PR00160 Glutaredoxin signature 4 22 9.7E-18 T 28-03-2018 IPR014025 Glutaredoxin subgroup CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 PRINTS PR00160 Glutaredoxin signature 46 59 9.7E-18 T 28-03-2018 IPR014025 Glutaredoxin subgroup CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 PRINTS PR00160 Glutaredoxin signature 60 73 9.7E-18 T 28-03-2018 IPR014025 Glutaredoxin subgroup CI104_RS00655 6910f7ce271f93b02b10d402d41ca2ff 83 Gene3D G3DSA:3.40.30.10 3 83 3.1E-27 T 28-03-2018 CI104_RS18305 b0e90500ec76cdfabf867171ca94045f 111 PIRSF PIRSF012296 1 111 4.5E-57 T 28-03-2018 IPR009307 Ethanolamine utilisation EutS GO:0031469 CI104_RS18305 b0e90500ec76cdfabf867171ca94045f 111 SMART SM00877 39 111 1.3E-12 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18305 b0e90500ec76cdfabf867171ca94045f 111 Pfam PF00936 BMC domain 40 102 1.5E-11 T 28-03-2018 IPR000249 Microcompartment protein, bacteria CI104_RS18305 b0e90500ec76cdfabf867171ca94045f 111 SUPERFAMILY SSF143414 39 107 8.63E-13 T 28-03-2018 CI104_RS04205 75ebf090c9fa25329c9ab8151f55522a 138 Gene3D G3DSA:3.30.420.140 1 138 3.6E-43 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CI104_RS04205 75ebf090c9fa25329c9ab8151f55522a 138 Pfam PF03652 Holliday junction resolvase 4 135 3.1E-43 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CI104_RS04205 75ebf090c9fa25329c9ab8151f55522a 138 SMART SM00732 3 103 4.2E-42 T 28-03-2018 IPR006641 YqgF/RNase H-like domain GO:0006139 CI104_RS04205 75ebf090c9fa25329c9ab8151f55522a 138 Hamap MF_00651 Putative pre-16S rRNA nuclease [yqgF]. 3 138 25.878 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CI104_RS04205 75ebf090c9fa25329c9ab8151f55522a 138 SUPERFAMILY SSF53098 3 136 3.49E-43 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS04205 75ebf090c9fa25329c9ab8151f55522a 138 TIGRFAM TIGR00250 RNAse_H_YqgF: putative transcription antitermination factor YqgF 6 135 5.0E-62 T 28-03-2018 IPR005227 Putative pre-16S rRNA nuclease GO:0006364 CI104_RS10170 2d0434f2be1fa63ed9d4086eadd403de 131 ProDom PD498860 RC0070 95 127 0.007 T 28-03-2018 CI104_RS10170 2d0434f2be1fa63ed9d4086eadd403de 131 Pfam PF07007 Lysozyme inhibitor LprI 22 110 3.2E-18 T 28-03-2018 IPR009739 Lysozyme inhibitor LprI, N-terminal CI104_RS10830 8cf348ca1c2c15f8e3a1a55f1507ea79 71 Gene3D G3DSA:3.10.350.10 3 68 6.8E-4 T 28-03-2018 CI104_RS10830 8cf348ca1c2c15f8e3a1a55f1507ea79 71 Pfam PF05489 Phage Tail Protein X 6 60 1.5E-17 T 28-03-2018 IPR008861 Phage Tail Protein X-like CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 Pfam PF02769 AIR synthase related protein, C-terminal domain 166 313 7.7E-24 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 TIGRFAM TIGR02124 hypE: hydrogenase expression/formation protein HypE 4 336 1.4E-138 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 Pfam PF00586 AIR synthase related protein, N-terminal domain 53 152 3.8E-15 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 SUPERFAMILY SSF56042 163 331 5.98E-38 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 SUPERFAMILY SSF55326 3 156 3.31E-32 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 PIRSF PIRSF005644 1 336 2.1E-120 T 28-03-2018 IPR011854 Hydrogenase expression/formation protein HypE CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 Gene3D G3DSA:3.30.1330.10 1 156 1.1E-22 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS19860 8bcd1a46877b94c70f2da718abeebd08 336 Gene3D G3DSA:3.90.650.10 161 324 1.8E-31 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS19355 58275f2c0a8056aed65022adaff31664 73 Pfam PF06174 Protein of unknown function (DUF987) 1 65 1.2E-36 T 28-03-2018 IPR009329 Protein of unknown function DUF987 CI104_RS19355 58275f2c0a8056aed65022adaff31664 73 ProDom PD056719 YEET C0272 C4574 AEC74 ECS1404 C1284 INTERGENIC-REGION YKFH YPJJ 10 73 1.0E-24 T 28-03-2018 IPR009329 Protein of unknown function DUF987 CI104_RS11155 db82bdd50efe2a73ae2cf91eaddcc951 68 Pfam PF02831 gpW 1 67 2.6E-31 T 28-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CI104_RS11155 db82bdd50efe2a73ae2cf91eaddcc951 68 SUPERFAMILY SSF64210 1 57 6.41E-22 T 28-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CI104_RS11155 db82bdd50efe2a73ae2cf91eaddcc951 68 ProDom PD019366 PROPHAGE HEAD JOINING GP3 COMPLETION HEAD-TO-TAIL W PROPHAGE-DERIVED DNA HEAD-TAIL 23 65 4.0E-16 T 28-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CI104_RS11155 db82bdd50efe2a73ae2cf91eaddcc951 68 Gene3D G3DSA:3.30.1580.10 3 65 4.6E-27 T 28-03-2018 CI104_RS16660 2fc3b0e64eb87670c72580f318ad7aff 334 Pfam PF03747 ADP-ribosylglycohydrolase 8 302 1.4E-58 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CI104_RS16660 2fc3b0e64eb87670c72580f318ad7aff 334 Gene3D G3DSA:1.10.4080.10 2 334 3.8E-68 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CI104_RS16660 2fc3b0e64eb87670c72580f318ad7aff 334 SUPERFAMILY SSF101478 4 327 6.02E-68 T 28-03-2018 IPR005502 ADP-ribosylation/Crystallin J1 CI104_RS09440 50c4998413354f123e47a596127fb223 344 SMART SM00507 261 310 0.0026 T 28-03-2018 IPR003615 HNH nuclease CI104_RS09440 50c4998413354f123e47a596127fb223 344 Gene3D G3DSA:3.30.50.20 271 339 1.3E-15 T 28-03-2018 CI104_RS09440 50c4998413354f123e47a596127fb223 344 Pfam PF06147 Protein of unknown function (DUF968) 130 341 2.3E-73 T 28-03-2018 IPR010373 Protein of unknown function DUF968 CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 Hamap MF_00106 Mannonate dehydratase [uxuA]. 1 396 223.906 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 TIGRFAM TIGR00695 uxuA: mannonate dehydratase 1 392 3.6E-209 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 Pfam PF03786 D-mannonate dehydratase (UxuA) 1 388 2.3E-155 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 Gene3D G3DSA:3.20.20.150 1 393 1.5E-105 T 28-03-2018 CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 SUPERFAMILY SSF51658 1 133 1.76E-77 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 SUPERFAMILY SSF51658 163 383 1.76E-77 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS16985 495fd77404348d858373ea4fc6b940b1 396 PIRSF PIRSF016049 1 394 1.2E-181 T 28-03-2018 IPR004628 Mannonate dehydratase GO:0006064|GO:0008927 KEGG: 00040+4.2.1.8|MetaCyc: PWY-7242 CI104_RS03880 5503619eac7204508252d4f85800b1a6 394 Gene3D G3DSA:3.40.640.10 55 271 2.6E-44 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS03880 5503619eac7204508252d4f85800b1a6 394 SUPERFAMILY SSF53383 4 393 2.31E-99 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS03880 5503619eac7204508252d4f85800b1a6 394 Pfam PF00155 Aminotransferase class I and II 57 389 2.6E-37 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS03880 5503619eac7204508252d4f85800b1a6 394 Gene3D G3DSA:3.90.1150.10 272 394 2.9E-27 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS05365 1c916573b466334ae2cd41809f4d2d7d 198 Gene3D G3DSA:3.30.420.10 4 198 2.2E-68 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS05365 1c916573b466334ae2cd41809f4d2d7d 198 SUPERFAMILY SSF53098 3 195 2.73E-69 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS05365 1c916573b466334ae2cd41809f4d2d7d 198 Pfam PF01351 Ribonuclease HII 13 189 1.4E-37 T 28-03-2018 IPR024567 Ribonuclease HII/HIII domain CI104_RS05365 1c916573b466334ae2cd41809f4d2d7d 198 Hamap MF_00052_B Ribonuclease HII [rnhB]. 11 190 39.5 T 28-03-2018 IPR022898 Ribonuclease HII GO:0004523 CI104_RS02730 10bc29182e980be021c96955d9426c2e 270 Gene3D G3DSA:3.40.50.300 5 253 8.4E-62 T 28-03-2018 CI104_RS02730 10bc29182e980be021c96955d9426c2e 270 SUPERFAMILY SSF52540 8 238 1.93E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS02730 10bc29182e980be021c96955d9426c2e 270 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS02730 10bc29182e980be021c96955d9426c2e 270 Pfam PF00005 ABC transporter 25 172 2.3E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS02730 10bc29182e980be021c96955d9426c2e 270 SMART SM00382 33 229 1.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS28680 ca4f1914aecedf2801c4e1b57f90dddc 236 SUPERFAMILY SSF52540 4 83 1.01E-9 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS28680 ca4f1914aecedf2801c4e1b57f90dddc 236 Gene3D G3DSA:3.40.50.300 3 207 6.9E-13 T 28-03-2018 CI104_RS28680 ca4f1914aecedf2801c4e1b57f90dddc 236 Pfam PF13175 AAA ATPase domain 4 52 7.7E-10 T 28-03-2018 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 ProSitePatterns PS00812 Glycosyl hydrolases family 8 signature. 115 133 - T 28-03-2018 IPR019834 Glycoside hydrolase, family 8, conserved site KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 Gene3D G3DSA:1.50.10.10 23 361 3.6E-99 T 28-03-2018 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 Pfam PF01270 Glycosyl hydrolases family 8 2 347 5.6E-132 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 SUPERFAMILY SSF48208 10 352 9.87E-104 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 53 66 8.4E-21 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 332 346 8.4E-21 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 241 250 8.4E-21 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 180 197 8.4E-21 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 115 133 8.4E-21 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS01060 1b58b9932a1bbf42459a548dc4c3d2ed 369 PRINTS PR00735 Glycosyl hydrolase family 8 signature 216 227 8.4E-21 T 28-03-2018 IPR002037 Glycoside hydrolase, family 8 GO:0004553|GO:0005975 KEGG: 00500+3.2.1.4|MetaCyc: PWY-6788 CI104_RS04030 bb251bed1c63017b46ca91c96ebe33d7 392 Pfam PF03916 Polysulphide reductase, NrfD 45 329 4.0E-18 T 28-03-2018 IPR005614 NrfD family CI104_RS04030 bb251bed1c63017b46ca91c96ebe33d7 392 Gene3D G3DSA:1.20.1630.10 41 336 1.8E-42 T 28-03-2018 CI104_RS07715 b64099d2233d231e6c89c7202fba7302 468 Pfam PF03573 outer membrane porin, OprD family 33 431 2.3E-24 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CI104_RS07715 b64099d2233d231e6c89c7202fba7302 468 Gene3D G3DSA:2.40.160.10 2 468 7.6E-96 T 28-03-2018 CI104_RS07715 b64099d2233d231e6c89c7202fba7302 468 SUPERFAMILY SSF56935 215 321 9.85E-5 T 28-03-2018 CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 Pfam PF03928 Haem-degrading 204 326 2.9E-25 T 28-03-2018 IPR005624 Haem-degrading CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 Gene3D G3DSA:1.20.1200.10 12 183 2.6E-49 T 28-03-2018 CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 SUPERFAMILY SSF89028 1 174 3.34E-52 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 SUPERFAMILY SSF143744 197 329 1.7E-36 T 28-03-2018 CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 Pfam PF01923 Cobalamin adenosyltransferase 3 166 3.6E-52 T 28-03-2018 IPR016030 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase-like KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 PIRSF PIRSF036411 1 332 1.2E-92 T 28-03-2018 IPR009221 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, bifunctional PduO CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 ProDom PD007457 TRANSFERASE ADENOSYLTRANSFERASE COBALAMIN ATP:COBIALAMIN ADENOSYLTRANSFERASE PDUO TYPE RELATED ACIDURIA YVQK 9 156 4.0E-44 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CI104_RS16245 b5db465bf07e77f60f05c4c4f25a9800 335 TIGRFAM TIGR00636 PduO_Nterm: ATP:cob(I)alamin adenosyltransferase 4 174 3.6E-48 T 28-03-2018 IPR029499 ATP:cob(I)alamin adenosyltransferase, PduO-type KEGG: 00860+2.5.1.17|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6268|MetaCyc: PWY-6269|Reactome: R-HSA-196741 CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 Pfam PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain 12 128 1.3E-30 T 28-03-2018 IPR013341 Mandelate racemase/muconate lactonizing enzyme, N-terminal domain CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 Gene3D G3DSA:3.30.390.10 1 132 1.9E-31 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 SUPERFAMILY SSF54826 4 129 5.16E-32 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 SUPERFAMILY SSF51604 116 371 5.76E-63 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 ProSitePatterns PS00908 Mandelate racemase / muconate lactonizing enzyme family signature 1. 103 128 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 ProSitePatterns PS00909 Mandelate racemase / muconate lactonizing enzyme family signature 2. 194 225 - T 28-03-2018 IPR018110 Mandelate racemase/muconate lactonizing enzyme, conserved site GO:0009063 CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 SMART SM00922 147 244 2.1E-20 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 TIGRFAM TIGR02534 mucon_cyclo: muconate and chloromuconate cycloisomerases 6 371 5.7E-143 T 28-03-2018 IPR013370 Muconate/chloromuconate cycloisomerase GO:0018849|GO:0018850|GO:0030145 CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 Pfam PF13378 Enolase C-terminal domain-like 155 363 1.9E-46 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS13205 b34c15678f01df2474f9fc09fc5b7d4f 374 Gene3D G3DSA:3.20.20.120 133 374 4.6E-55 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS07370 e38acb2b45e6ada5847f306731a7e1a4 407 Pfam PF01507 Phosphoadenosine phosphosulfate reductase family 30 234 3.3E-16 T 28-03-2018 IPR002500 Phosphoadenosine phosphosulphate reductase GO:0003824|GO:0008152 Reactome: R-HSA-196843 CI104_RS07370 e38acb2b45e6ada5847f306731a7e1a4 407 Gene3D G3DSA:3.40.50.620 4 237 1.8E-24 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS07370 e38acb2b45e6ada5847f306731a7e1a4 407 SUPERFAMILY SSF52402 10 232 1.79E-41 T 28-03-2018 CI104_RS07370 e38acb2b45e6ada5847f306731a7e1a4 407 Pfam PF11922 Domain of unknown function (DUF3440) 237 339 9.7E-25 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 CI104_RS07370 e38acb2b45e6ada5847f306731a7e1a4 407 Pfam PF11922 Domain of unknown function (DUF3440) 353 384 1.5E-7 T 28-03-2018 IPR021845 Protein of unknown function DUF3440 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 SUPERFAMILY SSF53613 7 307 1.12E-84 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 PRINTS PR00990 Ribokinase signature 36 55 3.1E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 PRINTS PR00990 Ribokinase signature 220 231 3.1E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 PRINTS PR00990 Ribokinase signature 9 30 3.1E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 PRINTS PR00990 Ribokinase signature 108 121 3.1E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 PRINTS PR00990 Ribokinase signature 176 191 3.1E-36 T 28-03-2018 IPR002139 Ribokinase/fructokinase GO:0016301 Reactome: R-HSA-71336 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 Pfam PF00294 pfkB family carbohydrate kinase 6 297 4.9E-75 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 Gene3D G3DSA:3.40.1190.20 1 309 2.3E-85 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 249 262 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 TIGRFAM TIGR02152 D_ribokin_bact: ribokinase 8 302 2.3E-108 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CI104_RS25085 585e93ad233dcca2a1283823265932d7 309 Hamap MF_01987 Ribokinase [rbsK]. 5 304 25.925 T 28-03-2018 IPR011877 Ribokinase GO:0004747|GO:0006014 KEGG: 00030+2.7.1.15|Reactome: R-HSA-71336 CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 Pfam PF13361 UvrD-like helicase C-terminal domain 526 663 2.2E-14 T 28-03-2018 IPR014017 UvrD-like DNA helicase, C-terminal GO:0005524|GO:0016787 CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 Gene3D G3DSA:3.40.50.300 187 499 1.7E-44 T 28-03-2018 CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 SUPERFAMILY SSF52540 195 348 1.05E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 SUPERFAMILY SSF52540 385 676 1.05E-85 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 Gene3D G3DSA:3.40.50.300 500 683 1.3E-28 T 28-03-2018 CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 Pfam PF00580 UvrD/REP helicase N-terminal domain 197 490 2.9E-43 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CI104_RS09275 e03e929844f7c26e69e2e165ecbf67d4 684 Pfam PF12462 DNA helicase IV / RNA helicase N terminal 1 164 6.6E-61 T 28-03-2018 IPR022161 DNA helicase IV, N-terminal domain CI104_RS18120 3977d013be68610a73fd29d585497f23 323 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 10 300 1.3E-68 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS18120 3977d013be68610a73fd29d585497f23 323 TIGRFAM TIGR01139 cysK: cysteine synthase A 9 312 7.3E-146 T 28-03-2018 IPR005859 Cysteine synthase CysK GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CI104_RS18120 3977d013be68610a73fd29d585497f23 323 Gene3D G3DSA:3.40.50.1100 20 133 1.1E-32 T 28-03-2018 CI104_RS18120 3977d013be68610a73fd29d585497f23 323 SUPERFAMILY SSF53686 3 317 1.57E-97 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS18120 3977d013be68610a73fd29d585497f23 323 ProSitePatterns PS00901 Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 31 49 - T 28-03-2018 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site GO:0006535 CI104_RS18120 3977d013be68610a73fd29d585497f23 323 TIGRFAM TIGR01136 cysKM: cysteine synthase 10 312 4.3E-137 T 28-03-2018 IPR005856 Cysteine synthase GO:0004124|GO:0006535 KEGG: 00270+2.5.1.47|KEGG: 00920+2.5.1.47|MetaCyc: PWY-6936 CI104_RS18120 3977d013be68610a73fd29d585497f23 323 Gene3D G3DSA:3.40.50.1100 134 323 1.5E-59 T 28-03-2018 CI104_RS18615 b6a946e2ae406916ac2a0d76c3bf27cd 128 SUPERFAMILY SSF82649 1 125 2.22E-49 T 28-03-2018 CI104_RS18615 b6a946e2ae406916ac2a0d76c3bf27cd 128 TIGRFAM TIGR01999 iscU: FeS cluster assembly scaffold IscU 3 126 2.0E-71 T 28-03-2018 IPR011339 ISC system FeS cluster assembly, IscU scaffold GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CI104_RS18615 b6a946e2ae406916ac2a0d76c3bf27cd 128 Pfam PF01592 NifU-like N terminal domain 2 126 2.2E-57 T 28-03-2018 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal GO:0005506|GO:0016226|GO:0051536 Reactome: R-HSA-1362409 CI104_RS18615 b6a946e2ae406916ac2a0d76c3bf27cd 128 Gene3D G3DSA:3.90.1010.10 1 128 4.0E-53 T 28-03-2018 CI104_RS19345 51b12080e8e63726090a78faa60eed64 147 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 52 147 2.0E-36 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS19345 51b12080e8e63726090a78faa60eed64 147 Pfam PF03230 Antirestriction protein 55 147 2.0E-33 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS01325 6df0cbd83f684303e598dad2e3be3747 85 Gene3D G3DSA:1.10.1200.10 2 85 8.9E-15 T 28-03-2018 CI104_RS01325 6df0cbd83f684303e598dad2e3be3747 85 SUPERFAMILY SSF47336 3 83 2.36E-10 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS01325 6df0cbd83f684303e598dad2e3be3747 85 Pfam PF00550 Phosphopantetheine attachment site 8 62 3.1E-6 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS22200 2481d21d76c53e9e0bce143a20f3c768 397 SUPERFAMILY SSF103473 10 395 8.5E-53 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS22200 2481d21d76c53e9e0bce143a20f3c768 397 Pfam PF07690 Major Facilitator Superfamily 24 334 2.6E-22 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS22200 2481d21d76c53e9e0bce143a20f3c768 397 Gene3D G3DSA:1.20.1250.20 6 199 8.6E-25 T 28-03-2018 CI104_RS22200 2481d21d76c53e9e0bce143a20f3c768 397 Gene3D G3DSA:1.20.1250.20 205 397 1.3E-17 T 28-03-2018 CI104_RS22000 b83dbf36c8842c0fe95896a81cc35883 399 Pfam PF05987 Bacterial protein of unknown function (DUF898) 14 380 2.8E-58 T 28-03-2018 IPR010295 Protein of unknown function DUF898 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 332 428 3.8E-19 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1109 1213 2.5E-24 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1214 1316 3.0E-26 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 226 331 1.2E-24 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 131 225 3.8E-16 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1419 1523 1.0E-23 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 535 630 1.8E-20 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 806 923 1.4E-13 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1 55 8.4E-9 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1008 1108 4.2E-22 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 631 722 6.4E-26 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 924 1007 6.0E-13 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1627 1731 4.9E-22 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1317 1418 3.0E-24 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 56 130 2.9E-8 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1524 1626 7.4E-25 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 1732 1847 3.3E-21 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 429 534 8.5E-23 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.1310 723 805 2.4E-15 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.10 1945 2029 2.7E-10 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.10 1852 1944 7.1E-13 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.40.10 2602 2664 5.8E-4 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 TIGRFAM TIGR03661 T1SS_VCA0849: type I secretion C-terminal target domain (VC_A0849 subclass) 2831 2908 4.6E-18 T 28-03-2018 IPR019960 Type I secretion C-terminal target domain, VC_A0849 subclass CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2212 2254 0.0012 T 28-03-2018 IPR010221 VCBS repeat CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2732 2791 1.1E-4 T 28-03-2018 IPR010221 VCBS repeat CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 TIGRFAM TIGR01965 VCBS_repeat: VCBS repeat 2475 2503 0.0027 T 28-03-2018 IPR010221 VCBS repeat CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.500.10 2433 2544 2.9E-8 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.120.640 2177 2300 1.6E-7 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Gene3D G3DSA:2.60.120.640 2704 2811 1.4E-12 T 28-03-2018 CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 1731 1756 0.15 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 536 559 0.66 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 1514 1544 1.9 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 1015 1032 4.6 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 621 647 0.68 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 718 740 0.58 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 1317 1344 1.3 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS19225 748ff8ec7e7fffadd1de2973dac9ccc1 2912 Pfam PF12245 Bacterial Ig-like domain (group 3) 1816 1840 0.12 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS00245 4abe309a48b035058975ebd63db10be8 459 Gene3D G3DSA:2.40.170.10 80 459 1.7E-79 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS00245 4abe309a48b035058975ebd63db10be8 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 365 426 0.001 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS00245 4abe309a48b035058975ebd63db10be8 459 ProDom PD008788 PORIN MEMBRANE PRECURSOR SIGNAL MALTOPORIN OUTER ION TRANSMEMBRANE RECEPTOR LAMB 108 207 5.0E-49 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS00245 4abe309a48b035058975ebd63db10be8 459 SUPERFAMILY SSF56935 80 459 1.51E-91 T 28-03-2018 CI104_RS00245 4abe309a48b035058975ebd63db10be8 459 Pfam PF02264 LamB porin 82 459 9.2E-79 T 28-03-2018 IPR003192 Porin, LamB type GO:0006810|GO:0016020 CI104_RS26385 3f7fc3faec5bb3a75dc47e1595ef8c66 132 Gene3D G3DSA:3.10.180.10 3 131 6.4E-17 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS26385 3f7fc3faec5bb3a75dc47e1595ef8c66 132 SUPERFAMILY SSF54593 12 130 1.13E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS26385 3f7fc3faec5bb3a75dc47e1595ef8c66 132 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 13 126 4.0E-5 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS13695 4b452c0214d78b439229838b22310449 147 SUPERFAMILY SSF46894 40 123 3.68E-10 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS13695 4b452c0214d78b439229838b22310449 147 Pfam PF00486 Transcriptional regulatory protein, C terminal 48 123 1.4E-9 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS13695 4b452c0214d78b439229838b22310449 147 SMART SM00862 45 123 9.1E-7 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS13695 4b452c0214d78b439229838b22310449 147 Gene3D G3DSA:1.10.10.10 21 129 7.9E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14855 40125800f29dffcd36d5a2de85ec8427 192 Pfam PF11985 Protein of unknown function (DUF3486) 8 189 4.2E-58 T 28-03-2018 IPR021874 Bacteriophage Mu, Gp27 CI104_RS24575 27e02757b1f8c01fea8c032321a011b9 302 Pfam PF01553 Acyltransferase 75 212 2.8E-13 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS24575 27e02757b1f8c01fea8c032321a011b9 302 Gene3D G3DSA:3.40.1130.10 49 221 7.7E-21 T 28-03-2018 CI104_RS24575 27e02757b1f8c01fea8c032321a011b9 302 SUPERFAMILY SSF69593 20 214 1.83E-26 T 28-03-2018 CI104_RS24575 27e02757b1f8c01fea8c032321a011b9 302 SMART SM00563 88 215 8.2E-16 T 28-03-2018 IPR002123 Phospholipid/glycerol acyltransferase GO:0008152|GO:0016746 CI104_RS09655 4c52b6a470d31125575fbeca250e52fc 126 Gene3D G3DSA:1.10.10.10 5 109 2.5E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09655 4c52b6a470d31125575fbeca250e52fc 126 Pfam PF01638 HxlR-like helix-turn-helix 7 95 9.8E-26 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CI104_RS09655 4c52b6a470d31125575fbeca250e52fc 126 SUPERFAMILY SSF46785 4 95 2.29E-26 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05950 f746412145a86c7d7541ce83ba2090e4 343 Pfam PF13343 Bacterial extracellular solute-binding protein 76 288 6.0E-33 T 28-03-2018 CI104_RS05950 f746412145a86c7d7541ce83ba2090e4 343 Gene3D G3DSA:3.40.190.10 145 295 2.6E-36 T 28-03-2018 CI104_RS05950 f746412145a86c7d7541ce83ba2090e4 343 Gene3D G3DSA:3.40.190.10 25 144 2.7E-11 T 28-03-2018 CI104_RS05950 f746412145a86c7d7541ce83ba2090e4 343 PIRSF PIRSF002825 1 340 2.2E-71 T 28-03-2018 IPR026045 Ferric binding protein CI104_RS05950 f746412145a86c7d7541ce83ba2090e4 343 SUPERFAMILY SSF53850 25 328 4.05E-71 T 28-03-2018 CI104_RS14400 26330d28f38e7e76dfdcad2420d431e9 231 SUPERFAMILY SSF110857 47 160 5.76E-10 T 28-03-2018 IPR013024 Gamma-glutamyl cyclotransferase-like CI104_RS14400 26330d28f38e7e76dfdcad2420d431e9 231 Pfam PF04752 ChaC-like protein 47 214 2.3E-53 T 28-03-2018 IPR006840 Glutathione-specific gamma-glutamylcyclotransferase GO:0003839|GO:0006751 Reactome: R-HSA-174403 CI104_RS14400 26330d28f38e7e76dfdcad2420d431e9 231 Gene3D G3DSA:3.10.490.10 32 219 8.7E-33 T 28-03-2018 CI104_RS21975 79a1fc587ad72b82db30c17c47dd38da 366 Pfam PF03739 Predicted permease YjgP/YjgQ family 5 343 4.7E-72 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CI104_RS21975 79a1fc587ad72b82db30c17c47dd38da 366 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 2 348 1.1E-115 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CI104_RS04165 5d6c4f329319f87413fde7bc78d526ae 239 Pfam PF11101 Protein of unknown function (DUF2884) 24 237 1.5E-39 T 28-03-2018 IPR021307 Protein of unknown function DUF2884 CI104_RS25405 06796f9a72468948e2356430c94e4c1a 184 Gene3D G3DSA:2.30.31.10 8 142 1.1E-6 T 28-03-2018 IPR009044 ssDNA-binding transcriptional regulator GO:0003677|GO:0006355 CI104_RS25405 06796f9a72468948e2356430c94e4c1a 184 Pfam PF08536 Whirly transcription factor 48 128 1.1E-4 T 28-03-2018 IPR013742 Whirly transcription factor GO:0003697|GO:0006355|GO:0006952 CI104_RS00520 ae0123d3e435e4004cb31d3a20bbe28d 78 TIGRFAM TIGR00009 L28: ribosomal protein bL28 1 57 1.2E-27 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS00520 ae0123d3e435e4004cb31d3a20bbe28d 78 Gene3D G3DSA:2.30.170.40 2 75 1.5E-27 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS00520 ae0123d3e435e4004cb31d3a20bbe28d 78 Hamap MF_00373 50S ribosomal protein L28 [rpmB]. 1 67 21.225 T 28-03-2018 IPR001383 Ribosomal protein L28 GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS00520 ae0123d3e435e4004cb31d3a20bbe28d 78 SUPERFAMILY SSF143800 1 77 1.57E-29 T 28-03-2018 IPR034704 L28p-like Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS00520 ae0123d3e435e4004cb31d3a20bbe28d 78 Pfam PF00830 Ribosomal L28 family 3 62 1.9E-25 T 28-03-2018 IPR026569 Ribosomal protein L28/L24 GO:0003735 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 SUPERFAMILY SSF53822 529 682 2.65E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 SUPERFAMILY SSF53822 344 490 2.65E-69 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Hamap MF_01890 Penicillin-binding protein activator LpoA [lpoA]. 6 678 36.042 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Gene3D G3DSA:3.40.50.2300 179 239 0.041 T 28-03-2018 CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Pfam PF04348 LppC putative lipoprotein 40 285 5.9E-44 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Pfam PF04348 LppC putative lipoprotein 352 678 1.3E-87 T 28-03-2018 IPR007443 Penicillin-binding protein activator LpoA CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Gene3D G3DSA:1.25.40.10 41 178 0.0026 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 SUPERFAMILY SSF53822 258 285 1.79E-5 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Gene3D G3DSA:3.40.50.2300 530 671 1.5E-14 T 28-03-2018 CI104_RS03000 cd47c01fca9acec8132f4a180253b2ce 684 Gene3D G3DSA:3.40.50.2300 255 501 2.1E-45 T 28-03-2018 CI104_RS25150 53a8ba515e66519e2c471709b4d7da85 126 Pfam PF03899 ATP synthase I chain 13 108 5.5E-14 T 28-03-2018 IPR005598 ATP synthase protein I CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 Gene3D G3DSA:3.40.50.10860 1 116 1.4E-36 T 28-03-2018 CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 SUPERFAMILY SSF53223 4 106 4.03E-29 T 28-03-2018 CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 Hamap MF_00222 Shikimate dehydrogenase (NADP(+)) [aroE]. 7 286 30.791 T 28-03-2018 IPR022893 Shikimate dehydrogenase family GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 Gene3D G3DSA:3.40.50.720 117 287 2.5E-33 T 28-03-2018 CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 SUPERFAMILY SSF51735 107 284 1.1E-37 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 Hamap MF_01578 Quinate/shikimate dehydrogenase [ydiB]. 1 288 77.496 T 28-03-2018 IPR022872 Quinate/Shikimate dehydrogenase GO:0004764|GO:0030266|GO:0052733|GO:0052734|GO:0055114 KEGG: 00400+1.1.1.282|KEGG: 00620+1.1.1.28|MetaCyc: PWY-6163|MetaCyc: PWY-6454|MetaCyc: PWY-6901 CI104_RS12065 82d52494ac624d49107590a9f56ed836 288 Pfam PF08501 Shikimate dehydrogenase substrate binding domain 12 94 7.4E-26 T 28-03-2018 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal GO:0004764|GO:0055114 KEGG: 00400+1.1.1.25|MetaCyc: PWY-6163 CI104_RS09370 f6100d6915b393c7f579cb64d1ac7a68 184 Pfam PF06254 Putative bacterial toxin ydaT 71 156 2.7E-14 T 28-03-2018 IPR009364 Putative bacterial toxin ydaT CI104_RS09370 f6100d6915b393c7f579cb64d1ac7a68 184 Gene3D G3DSA:1.10.3600.10 32 138 1.8E-25 T 28-03-2018 IPR009364 Putative bacterial toxin ydaT CI104_RS16655 3af5b368e6fdd1e7e467056e9a59c314 423 Gene3D G3DSA:1.20.1250.20 2 193 1.7E-15 T 28-03-2018 CI104_RS16655 3af5b368e6fdd1e7e467056e9a59c314 423 Gene3D G3DSA:1.20.1250.20 200 414 2.8E-23 T 28-03-2018 CI104_RS16655 3af5b368e6fdd1e7e467056e9a59c314 423 SUPERFAMILY SSF103473 5 404 1.14E-41 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS16655 3af5b368e6fdd1e7e467056e9a59c314 423 Pfam PF03825 Nucleoside H+ symporter 1 404 2.4E-182 T 28-03-2018 CI104_RS16655 3af5b368e6fdd1e7e467056e9a59c314 423 TIGRFAM TIGR00889 2A0110: nucleoside transporter 1 408 2.7E-191 T 28-03-2018 IPR004740 Nucleoside:H+ symporter GO:0005337|GO:0015858|GO:0016021 CI104_RS23625 227def15d937e74c01131d7e90f17657 309 ProDom PD037892 HOMOSERINE O-SUCCINYLTRANSFERASE TRANSFERASE ACYLTRANSFERASE BIOSYNTHESIS TRANSSUCCINYLASE HTS METHIONINE O- AMINO-ACID 36 289 2.0E-144 T 28-03-2018 CI104_RS23625 227def15d937e74c01131d7e90f17657 309 PIRSF PIRSF000450 1 308 5.2E-145 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CI104_RS23625 227def15d937e74c01131d7e90f17657 309 Hamap MF_00295 Homoserine O-succinyltransferase [metA]. 1 301 52.465 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CI104_RS23625 227def15d937e74c01131d7e90f17657 309 Gene3D G3DSA:3.40.50.880 34 301 6.2E-47 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS23625 227def15d937e74c01131d7e90f17657 309 TIGRFAM TIGR01001 metA: homoserine O-succinyltransferase 1 302 7.3E-164 T 28-03-2018 IPR005697 Homoserine O-succinyltransferase MetA GO:0005737|GO:0008899|GO:0019281 KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CI104_RS23625 227def15d937e74c01131d7e90f17657 309 SUPERFAMILY SSF52317 17 297 1.09E-98 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS23625 227def15d937e74c01131d7e90f17657 309 Pfam PF04204 Homoserine O-succinyltransferase 2 299 1.3E-129 T 28-03-2018 IPR033752 MetA family KEGG: 00270+2.3.1.46|KEGG: 00920+2.3.1.46 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 Hamap MF_00483 DNA replication terminus site-binding protein [tus]. 1 309 64.286 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 Gene3D G3DSA:3.50.14.10 7 186 6.6E-59 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 9 306 2.2E-136 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 TIGRFAM TIGR02648 rep_term_tus: DNA replication terminus site-binding protein 10 308 1.4E-155 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 Gene3D G3DSA:3.30.54.10 264 308 2.8E-8 T 28-03-2018 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 Gene3D G3DSA:3.30.54.10 187 246 1.3E-30 T 28-03-2018 CI104_RS12585 98f76e7c8a8bd1d8a2d19f7c5e94d9d3 309 SUPERFAMILY SSF56596 5 308 1.96E-124 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS01235 9d898bad8f6c3477676be9d739761aa1 277 Gene3D G3DSA:1.10.3720.10 5 261 1.3E-30 T 28-03-2018 CI104_RS01235 9d898bad8f6c3477676be9d739761aa1 277 SUPERFAMILY SSF161098 66 255 1.29E-19 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS01235 9d898bad8f6c3477676be9d739761aa1 277 TIGRFAM TIGR02790 nickel_nikC: nickel ABC transporter, permease subunit NikC 12 268 5.1E-118 T 28-03-2018 IPR014157 Nickel ABC transporter, permease subunit NikC GO:0015099|GO:0016021 CI104_RS01235 9d898bad8f6c3477676be9d739761aa1 277 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 271 9.1E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS10060 d94a992986fecb4b9524abc1f19df392 101 Pfam PF13591 MerR HTH family regulatory protein 8 92 1.8E-25 T 28-03-2018 CI104_RS10060 d94a992986fecb4b9524abc1f19df392 101 Hamap MF_01155 Chaperone modulatory protein CbpM [cbpM]. 1 97 25.486 T 28-03-2018 IPR022835 Chaperone modulatory protein CbpM CI104_RS10060 d94a992986fecb4b9524abc1f19df392 101 Gene3D G3DSA:1.10.1660.10 1 101 4.5E-9 T 28-03-2018 CI104_RS27495 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 1.2E-53 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS27495 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF01526 Tn3 transposase DDE domain 586 975 4.1E-146 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS26510 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF13700 Domain of unknown function (DUF4158) 5 172 1.2E-53 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS26510 b52b2972868b75f578ae27ec1317c0d5 1001 Pfam PF01526 Tn3 transposase DDE domain 586 975 4.1E-146 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS04250 1453ace84650bc4d6c4a5946885de1fc 51 ProDom PD056256 YQGC CYTOPLASMIC 1 40 2.0E-13 T 28-03-2018 IPR020102 Uncharacterised protein family YqgC CI104_RS04250 1453ace84650bc4d6c4a5946885de1fc 51 Pfam PF17430 Uncharacterized yqgC 1 40 7.4E-26 T 28-03-2018 IPR020102 Uncharacterised protein family YqgC CI104_RS10145 f85093f38b5d8faa55a4d49207f6f392 413 Gene3D G3DSA:3.40.50.1240 53 84 0.3 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS10145 f85093f38b5d8faa55a4d49207f6f392 413 Gene3D G3DSA:3.40.50.1240 137 272 1.4E-48 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS10145 f85093f38b5d8faa55a4d49207f6f392 413 SUPERFAMILY SSF53254 25 409 1.04E-75 T 28-03-2018 IPR029033 Histidine phosphatase superfamily CI104_RS10145 f85093f38b5d8faa55a4d49207f6f392 413 ProSitePatterns PS00616 Histidine acid phosphatases phosphohistidine signature. 31 45 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site CI104_RS10145 f85093f38b5d8faa55a4d49207f6f392 413 Pfam PF00328 Histidine phosphatase superfamily (branch 2) 31 362 5.0E-16 T 28-03-2018 IPR000560 Histidine phosphatase superfamily, clade-2 GO:0003993 CI104_RS10145 f85093f38b5d8faa55a4d49207f6f392 413 ProSitePatterns PS00778 Histidine acid phosphatases active site signature. 305 321 - T 28-03-2018 IPR033379 Histidine acid phosphatase active site CI104_RS07445 12bbb3cd5861009754623cf4c7f713dc 98 TIGRFAM TIGR01608 citD: citrate lyase acyl carrier protein 1 94 1.5E-29 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS07445 12bbb3cd5861009754623cf4c7f713dc 98 Hamap MF_00805 Citrate lyase acyl carrier protein [citD]. 1 97 26.697 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS07445 12bbb3cd5861009754623cf4c7f713dc 98 ProDom PD015389 LYASE CITRATE ACYL CARRIER GAMMA CHAIN CITD PRECURSOR SIGNAL DIRECT 1 74 6.0E-34 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS07445 12bbb3cd5861009754623cf4c7f713dc 98 Pfam PF06857 Malonate decarboxylase delta subunit (MdcD) 5 86 8.3E-29 T 28-03-2018 IPR023439 Malonate decarboxylase/citrate lyase acyl carrier protein CI104_RS07445 12bbb3cd5861009754623cf4c7f713dc 98 PIRSF PIRSF002736 1 97 6.1E-39 T 28-03-2018 IPR006495 Citrate lyase acyl carrier protein CitD GO:0005737 CI104_RS17210 f3658f20c993431fd5f6056f6401a0bb 216 Gene3D G3DSA:2.60.120.590 11 216 1.8E-51 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CI104_RS17210 f3658f20c993431fd5f6056f6401a0bb 216 SUPERFAMILY SSF51197 15 212 1.51E-61 T 28-03-2018 CI104_RS17210 f3658f20c993431fd5f6056f6401a0bb 216 Pfam PF13532 2OG-Fe(II) oxygenase superfamily 22 210 3.1E-54 T 28-03-2018 IPR027450 Alpha-ketoglutarate-dependent dioxygenase AlkB-like CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 Pfam PF01259 SAICAR synthetase 7 231 1.2E-58 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 Gene3D G3DSA:3.30.470.20 94 220 1.5E-45 T 28-03-2018 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 Gene3D G3DSA:3.30.200.20 1 93 4.1E-24 T 28-03-2018 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 SUPERFAMILY SSF56104 3 232 2.84E-75 T 28-03-2018 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 Hamap MF_00137 Phosphoribosylaminoimidazole-succinocarboxamide synthase [purC]. 4 234 28.794 T 28-03-2018 IPR028923 SAICAR synthetase/ADE2, N-terminal KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 ProSitePatterns PS01057 SAICAR synthetase signature 1. 86 100 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 ProSitePatterns PS01058 SAICAR synthetase signature 2. 173 181 - T 28-03-2018 IPR018236 SAICAR synthetase, conserved site GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234|Reactome: R-HSA-73817 CI104_RS18390 c299842ec5ae62b7617cfbdec55ee624 237 TIGRFAM TIGR00081 purC: phosphoribosylaminoimidazolesuccinocarboxamide synthase 3 234 2.9E-85 T 28-03-2018 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase GO:0004639|GO:0006164 KEGG: 00230+6.3.2.6|MetaCyc: PWY-6123|MetaCyc: PWY-6124|MetaCyc: PWY-7234 CI104_RS27655 044a1382fa1aad5ddfab87dbaeffb5cd 736 Pfam PF10412 Type IV secretion-system coupling protein DNA-binding domain 172 560 2.8E-121 T 28-03-2018 IPR019476 Type IV secretion system coupling protein TraD, DNA-binding domain CI104_RS27655 044a1382fa1aad5ddfab87dbaeffb5cd 736 Pfam PF12615 F sex factor protein N terminal 31 128 1.1E-19 T 28-03-2018 IPR022585 TraD coupling protein, N-terminal CI104_RS27655 044a1382fa1aad5ddfab87dbaeffb5cd 736 Gene3D G3DSA:3.40.50.300 131 574 2.8E-38 T 28-03-2018 CI104_RS27655 044a1382fa1aad5ddfab87dbaeffb5cd 736 SUPERFAMILY SSF52540 182 572 1.07E-58 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27655 044a1382fa1aad5ddfab87dbaeffb5cd 736 TIGRFAM TIGR02759 TraD_Ftype: type IV conjugative transfer system coupling protein TraD 8 576 9.4E-241 T 28-03-2018 IPR014128 Type IV conjugative transfer system, coupling protein TraD GO:0000746 CI104_RS24115 9c5001609ab0e878381e569d1450a09a 309 Hamap MF_01937 1,4-dihydroxy-2-naphthoate octaprenyltransferase [menA]. 9 302 21.198 T 28-03-2018 IPR004657 1,4-dihydroxy-2-naphthoate octaprenyltransferase GO:0009234|GO:0016021|GO:0046428 KEGG: 00130+2.5.1.74|MetaCyc: PWY-5839|MetaCyc: PWY-5851|MetaCyc: PWY-5852|MetaCyc: PWY-5853|MetaCyc: PWY-5890|MetaCyc: PWY-5891|MetaCyc: PWY-5892|MetaCyc: PWY-5895 CI104_RS24115 9c5001609ab0e878381e569d1450a09a 309 TIGRFAM TIGR00751 menA: 1,4-dihydroxy-2-naphthoate octaprenyltransferase 18 301 2.3E-146 T 28-03-2018 CI104_RS24115 9c5001609ab0e878381e569d1450a09a 309 PIRSF PIRSF005355 1 307 4.1E-98 T 28-03-2018 IPR026046 UbiA prenyltransferase domain containing protein 1 GO:0004659 Reactome: R-HSA-6806664 CI104_RS24115 9c5001609ab0e878381e569d1450a09a 309 Pfam PF01040 UbiA prenyltransferase family 27 277 3.5E-37 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CI104_RS04320 e226990ba375eeec98e418da4ac7c401 235 Pfam PF02361 Cobalt transport protein 9 201 8.9E-8 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component CI104_RS13235 a667fe62cd6d335597a009511be5cbaa 231 Pfam PF02613 Nitrate reductase delta subunit 36 151 2.3E-13 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS13235 a667fe62cd6d335597a009511be5cbaa 231 Gene3D G3DSA:1.10.3480.10 18 218 4.8E-32 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS13235 a667fe62cd6d335597a009511be5cbaa 231 SUPERFAMILY SSF89155 2 156 1.7E-28 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS13235 a667fe62cd6d335597a009511be5cbaa 231 TIGRFAM TIGR00684 narJ: nitrate reductase molybdenum cofactor assembly chaperone 9 154 1.5E-37 T 28-03-2018 IPR003765 Nitrate reductase chaperone, NarJ GO:0051082|GO:0051131 CI104_RS23720 454f81471e5e0db16200f10a07e6b3dc 211 Pfam PF02581 Thiamine monophosphate synthase 20 189 1.9E-53 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS23720 454f81471e5e0db16200f10a07e6b3dc 211 Gene3D G3DSA:3.20.20.70 13 206 7.7E-40 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS23720 454f81471e5e0db16200f10a07e6b3dc 211 SUPERFAMILY SSF51391 6 204 1.31E-62 T 28-03-2018 IPR022998 Thiamine phosphate synthase/TenI KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS23720 454f81471e5e0db16200f10a07e6b3dc 211 Hamap MF_00097 Thiamine-phosphate synthase [thiE]. 10 207 19.466 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS23720 454f81471e5e0db16200f10a07e6b3dc 211 TIGRFAM TIGR00693 thiE: thiamine-phosphate diphosphorylase 20 202 5.5E-57 T 28-03-2018 IPR034291 Thiamine phosphate synthase GO:0004789|GO:0009228 KEGG: 00730+2.5.1.3|MetaCyc: PWY-6893|MetaCyc: PWY-6894|MetaCyc: PWY-6897|MetaCyc: PWY-6907|MetaCyc: PWY-6908|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS09910 0e601287a19e073654e8e1b1009afaff 434 SUPERFAMILY SSF103473 18 430 3.92E-45 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS09910 0e601287a19e073654e8e1b1009afaff 434 Gene3D G3DSA:1.20.1250.20 233 432 9.0E-23 T 28-03-2018 CI104_RS09910 0e601287a19e073654e8e1b1009afaff 434 Gene3D G3DSA:1.20.1250.20 11 227 1.4E-20 T 28-03-2018 CI104_RS09910 0e601287a19e073654e8e1b1009afaff 434 Pfam PF07690 Major Facilitator Superfamily 49 294 6.1E-20 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 Pfam PF05034 Methylaspartate ammonia-lyase N-terminus 1 159 3.0E-71 T 28-03-2018 IPR022665 Methylaspartate ammonia-lyase, N-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 Gene3D G3DSA:3.30.390.10 2 162 1.7E-61 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 TIGRFAM TIGR01502 B_methylAsp_ase: methylaspartate ammonia-lyase 2 410 3.3E-165 T 28-03-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 PIRSF PIRSF017107 1 413 2.3E-247 T 28-03-2018 IPR006395 Methylaspartate ammonia-lyase GO:0050096 KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 Gene3D G3DSA:3.20.20.120 165 413 9.5E-34 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 SUPERFAMILY SSF54826 1 160 6.13E-65 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 SUPERFAMILY SSF51604 163 411 1.01E-80 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS08015 e170de30fa43a6a638a62c0f95b28fa5 413 Pfam PF07476 Methylaspartate ammonia-lyase C-terminus 162 410 2.0E-119 T 28-03-2018 IPR022662 Methylaspartate ammonia-lyase, C-terminal KEGG: 00630+4.3.1.2|KEGG: 00660+4.3.1.2|MetaCyc: PWY-5087|MetaCyc: PWY-6728 CI104_RS07240 044cb144f35c3052cb857d5fe820219c 206 PIRSF PIRSF033535 2 204 2.2E-28 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CI104_RS07240 044cb144f35c3052cb857d5fe820219c 206 SUPERFAMILY SSF141318 40 197 9.55E-16 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CI104_RS07240 044cb144f35c3052cb857d5fe820219c 206 Pfam PF10054 Predicted periplasmic lipoprotein (DUF2291) 8 201 1.2E-51 T 28-03-2018 IPR014582 Uncharacterised conserved protein UCP033535, periplasmic lipoprotein CI104_RS15030 64029be8efc9a823daef35f7983b26e9 139 Pfam PF00717 Peptidase S24-like 58 119 3.5E-13 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS15030 64029be8efc9a823daef35f7983b26e9 139 Gene3D G3DSA:2.10.109.10 25 139 1.6E-24 T 28-03-2018 CI104_RS15030 64029be8efc9a823daef35f7983b26e9 139 SUPERFAMILY SSF51306 13 135 4.19E-34 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS15030 64029be8efc9a823daef35f7983b26e9 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 52 62 4.0E-12 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS15030 64029be8efc9a823daef35f7983b26e9 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 63 74 4.0E-12 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS15030 64029be8efc9a823daef35f7983b26e9 139 PRINTS PR00726 Repressor LexA serine protease (S24) family signature 91 103 4.0E-12 T 28-03-2018 IPR006197 Peptidase S24, LexA-like GO:0003677|GO:0006355 CI104_RS20330 34afb64c6d23e2a0b068cf97b277968f 106 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 9 29 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS20330 34afb64c6d23e2a0b068cf97b277968f 106 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 8 30 1.5E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS20330 34afb64c6d23e2a0b068cf97b277968f 106 Pfam PF12528 Type II secretion prepilin peptidase dependent protein C 33 104 1.3E-23 T 28-03-2018 IPR022204 Prepilin peptidase dependent protein C CI104_RS20330 34afb64c6d23e2a0b068cf97b277968f 106 Pfam PF07963 Prokaryotic N-terminal methylation motif 6 30 1.5E-5 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS09175 7c0d5cd69948506aacdea764699b4358 381 Gene3D G3DSA:3.20.20.30 1 354 1.1E-91 T 28-03-2018 CI104_RS09175 7c0d5cd69948506aacdea764699b4358 381 Hamap MF_01229 Alkanesulfonate monooxygenase [ssuD]. 4 379 70.063 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CI104_RS09175 7c0d5cd69948506aacdea764699b4358 381 TIGRFAM TIGR03565 alk_sulf_monoox: alkanesulfonate monooxygenase, FMNH(2)-dependent 4 349 1.7E-189 T 28-03-2018 IPR019911 Alkanesulphonate monooxygenase, FMN-dependent GO:0008726|GO:0055114 KEGG: 00920+1.14.14.5 CI104_RS09175 7c0d5cd69948506aacdea764699b4358 381 Pfam PF00296 Luciferase-like monooxygenase 5 326 2.0E-87 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CI104_RS09175 7c0d5cd69948506aacdea764699b4358 381 SUPERFAMILY SSF51679 3 349 9.29E-99 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CI104_RS06015 bf4c7db1b3ee1966ce4fcb8680eb3994 385 Gene3D G3DSA:3.40.710.10 28 375 2.2E-71 T 28-03-2018 CI104_RS06015 bf4c7db1b3ee1966ce4fcb8680eb3994 385 Pfam PF00144 Beta-lactamase 45 357 5.5E-66 T 28-03-2018 IPR001466 Beta-lactamase-related CI104_RS06015 bf4c7db1b3ee1966ce4fcb8680eb3994 385 SUPERFAMILY SSF56601 33 363 4.11E-68 T 28-03-2018 IPR012338 Beta-lactamase/transpeptidase-like CI104_RS09235 9d7df63c6ac7fc695d174d1cbe59162c 172 Pfam PF07977 FabA-like domain 29 158 1.2E-53 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS09235 9d7df63c6ac7fc695d174d1cbe59162c 172 Gene3D G3DSA:3.10.129.10 1 172 6.8E-50 T 28-03-2018 CI104_RS09235 9d7df63c6ac7fc695d174d1cbe59162c 172 TIGRFAM TIGR01749 fabA: beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA 4 172 2.4E-97 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS09235 9d7df63c6ac7fc695d174d1cbe59162c 172 Hamap MF_00405 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase [fabA]. 2 172 51.668 T 28-03-2018 IPR010083 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA GO:0005737|GO:0006633|GO:0008693 KEGG: 00061+4.2.1.59+5.3.3.14|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS09235 9d7df63c6ac7fc695d174d1cbe59162c 172 SUPERFAMILY SSF54637 3 169 1.94E-55 T 28-03-2018 IPR029069 HotDog domain CI104_RS13215 a4ef0040edafeb6171c2a60245c9613a 192 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 51 3.3E-10 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS13215 a4ef0040edafeb6171c2a60245c9613a 192 Pfam PF13977 BetI-type transcriptional repressor, C-terminal 98 188 1.8E-6 T 28-03-2018 CI104_RS13215 a4ef0040edafeb6171c2a60245c9613a 192 SUPERFAMILY SSF46689 4 70 3.54E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS13215 a4ef0040edafeb6171c2a60245c9613a 192 SUPERFAMILY SSF48498 80 188 2.73E-16 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS13215 a4ef0040edafeb6171c2a60245c9613a 192 Gene3D G3DSA:1.10.357.10 5 188 1.2E-26 T 28-03-2018 CI104_RS15725 a0e5b628b3e613adc2960a508799e637 77 SUPERFAMILY SSF56349 1 65 6.77E-7 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS15725 a0e5b628b3e613adc2960a508799e637 77 Gene3D G3DSA:1.10.443.10 1 68 5.4E-7 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 SMART SM00857 3 137 1.9E-63 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 SUPERFAMILY SSF46689 139 182 3.72E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 ProSitePatterns PS00397 Site-specific recombinases active site. 6 14 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 Gene3D G3DSA:3.40.50.1390 1 105 5.8E-33 T 28-03-2018 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 Gene3D G3DSA:1.20.5.40 106 135 4.6E-18 T 28-03-2018 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 ProSitePatterns PS00398 Site-specific recombinases signature 2. 56 68 - T 28-03-2018 IPR006118 Recombinase, conserved site GO:0000150|GO:0006310 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 SUPERFAMILY SSF53041 1 136 2.09E-46 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 Pfam PF00239 Resolvase, N terminal domain 4 137 1.2E-46 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS25610 79b64f0b2288f2835ea6217c2bd72745 191 Gene3D G3DSA:1.10.10.60 139 188 1.7E-8 T 28-03-2018 CI104_RS19010 763b58453337c6c06e33e5ac877939ae 136 Pfam PF11162 Protein of unknown function (DUF2946) 14 128 6.9E-17 T 28-03-2018 IPR021333 Protein of unknown function DUF2946 CI104_RS24830 fb5f63081ed8d905ddae177d4cfc20ff 246 Gene3D G3DSA:3.40.50.10090 141 246 1.1E-20 T 28-03-2018 CI104_RS24830 fb5f63081ed8d905ddae177d4cfc20ff 246 SUPERFAMILY SSF69618 1 245 1.96E-52 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24830 fb5f63081ed8d905ddae177d4cfc20ff 246 Pfam PF02602 Uroporphyrinogen-III synthase HemD 14 242 5.7E-40 T 28-03-2018 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase GO:0004852|GO:0033014 KEGG: 00860+4.2.1.75|MetaCyc: PWY-5188|MetaCyc: PWY-5189|Reactome: R-HSA-189451 CI104_RS24830 fb5f63081ed8d905ddae177d4cfc20ff 246 Gene3D G3DSA:3.40.50.10090 35 140 8.7E-19 T 28-03-2018 CI104_RS22980 4e7434e6e2bd9fd2221595ca45c27557 476 Gene3D G3DSA:1.20.1250.20 213 456 1.8E-11 T 28-03-2018 CI104_RS22980 4e7434e6e2bd9fd2221595ca45c27557 476 Pfam PF13347 MFS/sugar transport protein 10 436 4.0E-85 T 28-03-2018 CI104_RS22980 4e7434e6e2bd9fd2221595ca45c27557 476 Gene3D G3DSA:1.20.1250.20 7 212 2.0E-13 T 28-03-2018 CI104_RS22980 4e7434e6e2bd9fd2221595ca45c27557 476 TIGRFAM TIGR00792 gph: sugar (Glycoside-Pentoside-Hexuronide) transporter 8 450 1.2E-169 T 28-03-2018 IPR001927 Sodium:galactoside symporter GO:0005215|GO:0006814|GO:0016020 CI104_RS22980 4e7434e6e2bd9fd2221595ca45c27557 476 SUPERFAMILY SSF103473 10 443 4.88E-30 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS22980 4e7434e6e2bd9fd2221595ca45c27557 476 ProSitePatterns PS00872 Sodium:galactoside symporter family signature. 59 84 - T 28-03-2018 IPR018043 Sodium:galactoside symporter, conserved site GO:0005215|GO:0006814|GO:0016020 CI104_RS12995 1a4d6d163b6ec22493802f507f580dd9 203 Pfam PF01965 DJ-1/PfpI family 9 168 9.5E-21 T 28-03-2018 IPR002818 DJ-1/PfpI CI104_RS12995 1a4d6d163b6ec22493802f507f580dd9 203 SUPERFAMILY SSF52317 9 180 1.15E-30 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS12995 1a4d6d163b6ec22493802f507f580dd9 203 Gene3D G3DSA:3.40.50.880 3 186 2.4E-23 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS02625 142d449bceb58543ee58e19760343c9d 365 Pfam PF06250 Protein of unknown function (DUF1016) 19 344 1.3E-108 T 28-03-2018 IPR009362 Protein of unknown function DUF1016 CI104_RS13890 33632217dcc08599d1ab5e95b6f197a3 332 Pfam PF01497 Periplasmic binding protein 43 307 8.6E-33 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CI104_RS13890 33632217dcc08599d1ab5e95b6f197a3 332 Gene3D G3DSA:3.40.50.1980 22 164 5.0E-20 T 28-03-2018 CI104_RS13890 33632217dcc08599d1ab5e95b6f197a3 332 Gene3D G3DSA:3.40.50.1980 165 329 2.2E-35 T 28-03-2018 CI104_RS13890 33632217dcc08599d1ab5e95b6f197a3 332 SUPERFAMILY SSF53807 40 326 5.49E-40 T 28-03-2018 CI104_RS20385 0b48a9e1f99ef82a0bed4c2f17b46097 72 Pfam PF06004 Bacterial protein of unknown function (DUF903) 23 71 3.3E-24 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CI104_RS20385 0b48a9e1f99ef82a0bed4c2f17b46097 72 Gene3D G3DSA:2.30.30.100 21 71 2.2E-26 T 28-03-2018 CI104_RS20385 0b48a9e1f99ef82a0bed4c2f17b46097 72 SUPERFAMILY SSF50182 21 71 3.11E-18 T 28-03-2018 IPR010920 LSM domain CI104_RS16500 1dd20b26630322e5823aa9854462e0bc 407 Gene3D G3DSA:3.40.50.2000 218 392 5.9E-21 T 28-03-2018 CI104_RS16500 1dd20b26630322e5823aa9854462e0bc 407 SUPERFAMILY SSF53756 1 309 3.98E-39 T 28-03-2018 CI104_RS16500 1dd20b26630322e5823aa9854462e0bc 407 Gene3D G3DSA:3.40.50.2000 16 217 2.2E-14 T 28-03-2018 CI104_RS16500 1dd20b26630322e5823aa9854462e0bc 407 TIGRFAM TIGR04007 wcaI: colanic acid biosynthesis glycosyltransferase WcaI 1 406 2.0E-270 T 28-03-2018 IPR023910 Colanic acid biosynthesis, glycosyl transferase, WcaI CI104_RS16500 1dd20b26630322e5823aa9854462e0bc 407 Pfam PF00534 Glycosyl transferases group 1 220 389 4.0E-19 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS16500 1dd20b26630322e5823aa9854462e0bc 407 Pfam PF13579 Glycosyl transferase 4-like domain 15 204 7.4E-28 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CI104_RS11810 8eb72f79e1bbfe5b5c567943de26e863 191 Gene3D G3DSA:2.60.120.10 109 180 2.3E-5 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS11810 8eb72f79e1bbfe5b5c567943de26e863 191 SUPERFAMILY SSF51182 1 183 1.07E-49 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS11810 8eb72f79e1bbfe5b5c567943de26e863 191 Gene3D G3DSA:2.60.120.10 6 108 9.9E-35 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS11810 8eb72f79e1bbfe5b5c567943de26e863 191 Hamap MF_01591 Protein Ves [ves]. 1 191 56.747 T 28-03-2018 IPR023482 Uncharacterised protein family Ves CI104_RS11810 8eb72f79e1bbfe5b5c567943de26e863 191 Pfam PF05962 HutD 5 175 3.0E-48 T 28-03-2018 IPR010282 Uncharacterised protein family HutD/Ves CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 PIRSF PIRSF006272 1 164 1.1E-79 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 ProDom PD035118 UPF0304 YFBU PLASMID YPO2563/Y1624/YP2374 YBFU PM1500 OXYGEN ECA3037 VV12093 PROTEIN 1 164 3.0E-92 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 Gene3D G3DSA:1.10.287.680 1 47 5.4E-26 T 28-03-2018 IPR023145 YfbU, helix-hairpin domain CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 Gene3D G3DSA:1.10.3190.10 54 164 1.1E-44 T 28-03-2018 IPR023146 YfbU, alpha-helical bundle domain CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 Hamap MF_00762 UPF0304 protein YfbU [yfbU]. 1 164 40.171 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 SUPERFAMILY SSF116960 1 164 3.4E-70 T 28-03-2018 CI104_RS17580 9bc8f47384c1ebd8ee934968c95ed9ad 164 Pfam PF03887 YfbU domain 1 164 2.8E-69 T 28-03-2018 IPR005587 Uncharacterised protein family UPF0304, YfbU CI104_RS12500 a7d2238a8310c7c1a8d34fda781ba8cc 206 TIGRFAM TIGR01947 rnfG: electron transport complex, RnfABCDGE type, G subunit 9 192 3.7E-66 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CI104_RS12500 a7d2238a8310c7c1a8d34fda781ba8cc 206 Hamap MF_00479 Electron transport complex subunit RsxG [rsxG]. 2 193 26.306 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CI104_RS12500 a7d2238a8310c7c1a8d34fda781ba8cc 206 SMART SM00900 99 191 1.4E-36 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CI104_RS12500 a7d2238a8310c7c1a8d34fda781ba8cc 206 Pfam PF04205 FMN-binding domain 99 187 7.2E-19 T 28-03-2018 IPR007329 FMN-binding GO:0010181|GO:0016020 CI104_RS12500 a7d2238a8310c7c1a8d34fda781ba8cc 206 PIRSF PIRSF006091 1 202 2.6E-69 T 28-03-2018 IPR010209 Electron transport complex, subunit RnfG/RsxG GO:0005886|GO:0009055|GO:0022900 CI104_RS05520 d83f8b8e5c7df70444081ec1a10b6f2a 240 Gene3D G3DSA:3.40.50.150 23 210 4.2E-18 T 28-03-2018 CI104_RS05520 d83f8b8e5c7df70444081ec1a10b6f2a 240 Pfam PF08241 Methyltransferase domain 72 125 3.7E-11 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CI104_RS05520 d83f8b8e5c7df70444081ec1a10b6f2a 240 SUPERFAMILY SSF53335 76 207 4.48E-18 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11270 997ff4e8e725b1bd17c84b88220ab257 132 Pfam PF14000 DNA packaging protein FI 4 129 4.6E-33 T 28-03-2018 IPR025147 DNA packaging protein FI CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 Pfam PF00654 Voltage gated chloride channel 89 437 4.4E-90 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 SUPERFAMILY SSF81340 16 453 8.11E-111 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 Gene3D G3DSA:1.10.3080.10 16 461 1.0E-105 T 28-03-2018 IPR014743 Chloride channel, core GO:0005216|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 PRINTS PR00762 Chloride channel signature 352 372 9.0E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 PRINTS PR00762 Chloride channel signature 405 424 9.0E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 PRINTS PR00762 Chloride channel signature 102 119 9.0E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 PRINTS PR00762 Chloride channel signature 183 202 9.0E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 PRINTS PR00762 Chloride channel signature 387 403 9.0E-29 T 28-03-2018 IPR001807 Chloride channel, voltage gated GO:0005247|GO:0006821|GO:0016020|GO:0055085 Reactome: R-HSA-2672351 CI104_RS05225 0216e1488208bdfbfb286bd20246d821 473 Hamap MF_01128 H(+)/Cl(-) exchange transporter ClcA [clcA]. 3 469 52.247 T 28-03-2018 IPR023861 Chloride channel, ClcA GO:0005887|GO:0006821|GO:0015108 CI104_RS13025 8f29df26cc14c7a3dd558a7dac8eb8e4 442 SUPERFAMILY SSF51445 86 391 9.53E-32 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS13025 8f29df26cc14c7a3dd558a7dac8eb8e4 442 Gene3D G3DSA:3.20.20.80 74 424 1.1E-44 T 28-03-2018 CI104_RS13025 8f29df26cc14c7a3dd558a7dac8eb8e4 442 Pfam PF02638 Glycosyl hydrolase-like 10 59 392 7.0E-118 T 28-03-2018 IPR003790 Glycosyl hydrolase-like 10 CI104_RS16685 78cae19df077d239bb4b13d6afa38f87 277 Gene3D G3DSA:3.30.1300.30 171 277 6.7E-16 T 28-03-2018 CI104_RS16685 78cae19df077d239bb4b13d6afa38f87 277 SUPERFAMILY SSF54523 186 277 2.98E-11 T 28-03-2018 CI104_RS16685 78cae19df077d239bb4b13d6afa38f87 277 Pfam PF03895 YadA-like membrane anchor domain 223 277 1.6E-6 T 28-03-2018 IPR005594 YadA-like, C-terminal CI104_RS15840 45f532dd91027eea3d6ca2e9e53ccec9 104 Pfam PF02049 Flagellar hook-basal body complex protein FliE 17 104 4.9E-28 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CI104_RS15840 45f532dd91027eea3d6ca2e9e53ccec9 104 Hamap MF_00724 Flagellar hook-basal body complex protein FliE [fliE]. 2 104 18.3 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CI104_RS15840 45f532dd91027eea3d6ca2e9e53ccec9 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 68 84 2.9E-22 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CI104_RS15840 45f532dd91027eea3d6ca2e9e53ccec9 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 33 49 2.9E-22 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CI104_RS15840 45f532dd91027eea3d6ca2e9e53ccec9 104 PRINTS PR01006 Flagellar hook-basal body complex protein FliE signature 89 102 2.9E-22 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CI104_RS15840 45f532dd91027eea3d6ca2e9e53ccec9 104 TIGRFAM TIGR00205 fliE: flagellar hook-basal body complex protein FliE 2 104 1.2E-41 T 28-03-2018 IPR001624 Flagellar hook-basal body complex protein FliE GO:0003774|GO:0005198|GO:0009288|GO:0071973 CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 Gene3D G3DSA:2.60.40.420 170 340 1.4E-23 T 28-03-2018 IPR008972 Cupredoxin CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 ProSitePatterns PS00080 Multicopper oxidases signature 2. 502 513 - T 28-03-2018 IPR002355 Multicopper oxidase, copper-binding site GO:0005507 CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 Pfam PF00394 Multicopper oxidase 182 292 5.3E-6 T 28-03-2018 IPR001117 Multicopper oxidase, type 1 GO:0055114 CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 SUPERFAMILY SSF49503 172 295 4.99E-31 T 28-03-2018 IPR008972 Cupredoxin CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 SUPERFAMILY SSF49503 350 519 3.97E-28 T 28-03-2018 IPR008972 Cupredoxin CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 Gene3D G3DSA:2.60.40.420 29 169 5.3E-28 T 28-03-2018 IPR008972 Cupredoxin CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 SUPERFAMILY SSF49503 33 166 5.24E-30 T 28-03-2018 IPR008972 Cupredoxin CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 Pfam PF07731 Multicopper oxidase 406 519 3.4E-23 T 28-03-2018 IPR011706 Multicopper oxidase, type 2 GO:0005507|GO:0016491|GO:0055114 CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 Pfam PF07732 Multicopper oxidase 53 166 7.3E-32 T 28-03-2018 IPR011707 Multicopper oxidase, type 3 GO:0005507 CI104_RS05085 1b9eab71d1ce29529b115a183af3acc7 519 Gene3D G3DSA:2.60.40.420 345 519 3.0E-33 T 28-03-2018 IPR008972 Cupredoxin CI104_RS21910 50834fdfb16965f6a770e3fb9ec578b5 416 SUPERFAMILY SSF51713 360 405 1.2E-42 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS21910 50834fdfb16965f6a770e3fb9ec578b5 416 SUPERFAMILY SSF51713 3 280 1.2E-42 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS21910 50834fdfb16965f6a770e3fb9ec578b5 416 Gene3D G3DSA:3.20.20.105 47 409 2.3E-59 T 28-03-2018 IPR002616 tRNA-guanine(15) transglycosylase-like GO:0006400|GO:0016763 MetaCyc: PWY-6700|Reactome: R-HSA-6782315 CI104_RS02525 511c13509c2d5bac3344b5c948cc6312 90 SUPERFAMILY SSF52038 1 89 2.22E-27 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) CI104_RS02525 511c13509c2d5bac3344b5c948cc6312 90 Gene3D G3DSA:3.30.370.10 1 90 2.1E-19 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) CI104_RS02525 511c13509c2d5bac3344b5c948cc6312 90 Pfam PF01337 Barstar (barnase inhibitor) 5 79 1.2E-4 T 28-03-2018 IPR000468 Barstar (barnase inhibitor) CI104_RS15560 27383e26a12f00b2b7d6004e9f5c9f19 116 Gene3D G3DSA:1.10.4000.10 3 102 2.0E-45 T 28-03-2018 CI104_RS15560 27383e26a12f00b2b7d6004e9f5c9f19 116 SUPERFAMILY SSF63592 1 98 9.68E-39 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS15560 27383e26a12f00b2b7d6004e9f5c9f19 116 ProDom PD015582 ACTIVATOR TRANSCRIPTIONAL TRANSCRIPTION FLAGELLUM FLHD FLAGELLAR DNA-BINDING REGULATION REGULATOR PROBABLE 9 98 1.0E-45 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS15560 27383e26a12f00b2b7d6004e9f5c9f19 116 Hamap MF_00725 Flagellar transcriptional regulator FlhD [flhD]. 1 104 27.815 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS15560 27383e26a12f00b2b7d6004e9f5c9f19 116 Pfam PF05247 Flagellar transcriptional activator (FlhD) 1 100 9.7E-40 T 28-03-2018 IPR023559 Flagellar transcriptional activator FlhD GO:0044780|GO:0045893 CI104_RS19450 732d9e35447337421ea12213429e0273 952 Pfam PF10593 Z1 domain 437 670 1.4E-83 T 28-03-2018 IPR018310 Putative endonuclease, Z1 domain CI104_RS19450 732d9e35447337421ea12213429e0273 952 Gene3D G3DSA:3.40.50.300 96 353 2.7E-4 T 28-03-2018 CI104_RS06370 98c6d40d228eafade1714437c97d6176 296 SUPERFAMILY SSF82866 15 125 8.24E-5 T 28-03-2018 CI104_RS06370 98c6d40d228eafade1714437c97d6176 296 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 57 79 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site CI104_RS06370 98c6d40d228eafade1714437c97d6176 296 Pfam PF01040 UbiA prenyltransferase family 19 265 1.3E-60 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CI104_RS06370 98c6d40d228eafade1714437c97d6176 296 Hamap MF_00154 Protoheme IX farnesyltransferase [cyoE]. 2 284 18.146 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CI104_RS06370 98c6d40d228eafade1714437c97d6176 296 TIGRFAM TIGR01473 cyoE_ctaB: protoheme IX farnesyltransferase 4 282 8.3E-93 T 28-03-2018 IPR006369 Protohaem IX farnesyltransferase GO:0008495|GO:0016021|GO:0048034 Reactome: R-HSA-189451 CI104_RS07470 a29ea1dd370599f70182ffe37b335a30 192 ProDom PD103779 CRCA ANTIMICROBIAL RESISTANCE LIPOPROTEIN RCP A PEPTIDE ACYLATION LIPID EXPORTED 39 180 2.0E-75 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CI104_RS07470 a29ea1dd370599f70182ffe37b335a30 192 SUPERFAMILY SSF56925 33 192 2.98E-80 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS07470 a29ea1dd370599f70182ffe37b335a30 192 Hamap MF_00837 Lipid A palmitoyltransferase PagP [pagP]. 12 192 42.74 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CI104_RS07470 a29ea1dd370599f70182ffe37b335a30 192 Gene3D G3DSA:2.40.160.20 35 192 2.2E-65 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS07470 a29ea1dd370599f70182ffe37b335a30 192 Pfam PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP 43 189 9.6E-66 T 28-03-2018 IPR009746 Antimicrobial peptide resistance/lipid A acylation PagP KEGG: 00565+2.3.1.25 CI104_RS19275 262558ff59c7b8c3e18f5f1ad9ac510f 503 Pfam PF13148 Protein of unknown function (DUF3987) 39 394 5.7E-59 T 28-03-2018 IPR025048 Protein of unknown function DUF3987) CI104_RS19275 262558ff59c7b8c3e18f5f1ad9ac510f 503 Gene3D G3DSA:3.40.50.300 73 337 0.0013 T 28-03-2018 CI104_RS06190 76d7a737f5a63e425adaf25ab3c8e8b7 320 SUPERFAMILY SSF53613 1 304 3.9E-49 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS06190 76d7a737f5a63e425adaf25ab3c8e8b7 320 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 251 264 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS06190 76d7a737f5a63e425adaf25ab3c8e8b7 320 Gene3D G3DSA:3.40.1190.20 1 312 7.6E-46 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS06190 76d7a737f5a63e425adaf25ab3c8e8b7 320 Pfam PF00294 pfkB family carbohydrate kinase 22 299 7.2E-34 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS27975 e5c96c6a623a83a27a2ceed2256481b9 80 Gene3D G3DSA:1.10.10.60 8 80 2.3E-18 T 28-03-2018 CI104_RS27975 e5c96c6a623a83a27a2ceed2256481b9 80 SUPERFAMILY SSF46689 1 80 6.27E-18 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27975 e5c96c6a623a83a27a2ceed2256481b9 80 Pfam PF01527 Transposase 4 70 2.2E-18 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CI104_RS18680 71e16b8be25ea44988ce7ce44f1a421e 426 Pfam PF00874 PRD domain 132 216 2.1E-6 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS18680 71e16b8be25ea44988ce7ce44f1a421e 426 Pfam PF00874 PRD domain 241 328 2.0E-11 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS18680 71e16b8be25ea44988ce7ce44f1a421e 426 SUPERFAMILY SSF63520 233 333 3.66E-15 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS18680 71e16b8be25ea44988ce7ce44f1a421e 426 Gene3D G3DSA:1.10.1790.10 124 222 0.55 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS18680 71e16b8be25ea44988ce7ce44f1a421e 426 Gene3D G3DSA:1.10.1790.10 227 333 1.3E-12 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS00575 807f190c47953f0f4fcc2892f1a1a2b2 338 SUPERFAMILY SSF53448 27 295 1.39E-63 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS00575 807f190c47953f0f4fcc2892f1a1a2b2 338 Gene3D G3DSA:3.90.550.10 26 307 4.0E-50 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS00575 807f190c47953f0f4fcc2892f1a1a2b2 338 Pfam PF08437 Glycosyl transferase family 8 C-terminal 278 334 6.7E-20 T 28-03-2018 IPR013645 Glycosyl transferase, family 8, C-terminal GO:0008918|GO:0009103 CI104_RS00575 807f190c47953f0f4fcc2892f1a1a2b2 338 Pfam PF01501 Glycosyl transferase family 8 27 276 4.3E-62 T 28-03-2018 IPR002495 Glycosyl transferase, family 8 GO:0016757 CI104_RS12630 484c4e831285d509fc81ee3462226057 344 Pfam PF01594 AI-2E family transporter 14 327 1.8E-69 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CI104_RS01280 6172df9ec9025f265737efd8fd670dae 218 Pfam PF11659 Protein of unknown function (DUF3261) 79 215 1.7E-37 T 28-03-2018 IPR021675 Protein of unknown function DUF3261 CI104_RS10775 f2e3c4d85fb07be7beed758eb55da5ec 118 Pfam PF09956 Uncharacterized conserved protein (DUF2190) 30 113 2.1E-8 T 28-03-2018 IPR011231 Bacteriophage VT1-Sakai, H0018 CI104_RS06025 6026494844bb0bc786e6e3fa218fad43 406 Gene3D G3DSA:1.20.1560.10 70 284 7.6E-16 T 28-03-2018 CI104_RS06025 6026494844bb0bc786e6e3fa218fad43 406 Pfam PF05992 SbmA/BacA-like family 80 393 1.4E-164 T 28-03-2018 IPR009248 SbmA/BacA-like GO:0005215|GO:0006810|GO:0016021 CI104_RS06025 6026494844bb0bc786e6e3fa218fad43 406 Gene3D G3DSA:1.20.1560.10 296 397 3.4E-4 T 28-03-2018 CI104_RS06025 6026494844bb0bc786e6e3fa218fad43 406 SUPERFAMILY SSF90123 299 389 6.93E-6 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS21645 83954b6a0cba25b0a8d7e28deb7a244c 398 Pfam PF02515 CoA-transferase family III 8 374 1.6E-131 T 28-03-2018 IPR003673 CoA-transferase family III GO:0003824 CI104_RS21645 83954b6a0cba25b0a8d7e28deb7a244c 398 Gene3D G3DSA:3.40.50.10540 2 398 9.2E-147 T 28-03-2018 IPR023606 CoA-transferase family III domain CI104_RS21645 83954b6a0cba25b0a8d7e28deb7a244c 398 SUPERFAMILY SSF89796 6 397 6.02E-137 T 28-03-2018 IPR023606 CoA-transferase family III domain CI104_RS02725 aab28caac5b726c06a2a1618c35e9cee 325 Pfam PF01699 Sodium/calcium exchanger protein 175 317 2.9E-27 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CI104_RS02725 aab28caac5b726c06a2a1618c35e9cee 325 Pfam PF01699 Sodium/calcium exchanger protein 4 144 4.1E-28 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CI104_RS02725 aab28caac5b726c06a2a1618c35e9cee 325 TIGRFAM TIGR00367 TIGR00367: K+-dependent Na+/Ca+ exchanger homolog 2 312 9.7E-101 T 28-03-2018 IPR004481 Sodium/potassium/calcium exchanger Reactome: R-HSA-425561 CI104_RS12740 7d36b30a2854b1d3c1f4a83f4dffa11f 186 SUPERFAMILY SSF55729 7 164 1.25E-40 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS12740 7d36b30a2854b1d3c1f4a83f4dffa11f 186 Gene3D G3DSA:3.40.630.30 6 174 4.1E-34 T 28-03-2018 CI104_RS12740 7d36b30a2854b1d3c1f4a83f4dffa11f 186 Pfam PF13302 Acetyltransferase (GNAT) domain 8 140 3.0E-20 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS17475 879719c26d94d4f7c3172580e2a36cc5 153 Pfam PF13673 Acetyltransferase (GNAT) domain 46 149 5.3E-17 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS17475 879719c26d94d4f7c3172580e2a36cc5 153 SUPERFAMILY SSF55729 1 149 3.84E-34 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS17475 879719c26d94d4f7c3172580e2a36cc5 153 Gene3D G3DSA:3.40.630.30 1 153 1.7E-33 T 28-03-2018 CI104_RS22650 9f10265f260bd35938de16532644509b 48 Pfam PF08085 Entericidin EcnA/B family 23 43 1.8E-8 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CI104_RS01365 c7ce0f2af7746e9c18b8869cb0817244 221 Pfam PF02592 Putative vitamin uptake transporter 43 199 3.5E-37 T 28-03-2018 IPR003744 Queuosine precursor transporter CI104_RS01365 c7ce0f2af7746e9c18b8869cb0817244 221 TIGRFAM TIGR00697 TIGR00697: conserved hypothetical integral membrane protein 12 205 1.5E-69 T 28-03-2018 IPR003744 Queuosine precursor transporter CI104_RS10505 6ebecaf2a2a25e80d37d79a918bab938 194 Gene3D G3DSA:3.90.950.10 2 194 7.0E-60 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS10505 6ebecaf2a2a25e80d37d79a918bab938 194 Hamap MF_00528 Septum formation protein Maf [maf]. 3 191 30.685 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS10505 6ebecaf2a2a25e80d37d79a918bab938 194 TIGRFAM TIGR00172 maf: septum formation protein Maf 2 185 8.8E-68 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS10505 6ebecaf2a2a25e80d37d79a918bab938 194 Pfam PF02545 Maf-like protein 4 186 6.3E-47 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS10505 6ebecaf2a2a25e80d37d79a918bab938 194 SUPERFAMILY SSF52972 1 185 5.36E-60 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS10505 6ebecaf2a2a25e80d37d79a918bab938 194 PIRSF PIRSF006305 1 193 7.3E-44 T 28-03-2018 IPR003697 Maf-like protein GO:0047429 CI104_RS00475 faa5b8fe5d97ef83fe3a231162b0eeb6 205 Pfam PF03458 UPF0126 domain 5 79 1.0E-18 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CI104_RS00475 faa5b8fe5d97ef83fe3a231162b0eeb6 205 Pfam PF03458 UPF0126 domain 91 164 6.0E-22 T 28-03-2018 IPR005115 Uncharacterised domain UPF0126 CI104_RS13550 aa34b354f03186bdda52dc6cd4ca4d4c 246 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 82 110 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CI104_RS13550 aa34b354f03186bdda52dc6cd4ca4d4c 246 Pfam PF00775 Dioxygenase 48 231 6.5E-55 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CI104_RS13550 aa34b354f03186bdda52dc6cd4ca4d4c 246 SUPERFAMILY SSF49482 8 240 1.28E-77 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CI104_RS13550 aa34b354f03186bdda52dc6cd4ca4d4c 246 TIGRFAM TIGR02422 protocat_beta: protocatechuate 3,4-dioxygenase, beta subunit 18 239 4.8E-110 T 28-03-2018 IPR012785 Protocatechuate 3,4-dioxygenase, beta subunit GO:0005506|GO:0018578|GO:0019619|GO:0055114 KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 CI104_RS13550 aa34b354f03186bdda52dc6cd4ca4d4c 246 Gene3D G3DSA:2.60.130.10 3 240 5.8E-59 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CI104_RS13550 aa34b354f03186bdda52dc6cd4ca4d4c 246 Pfam PF12391 Protocatechuate 3,4-dioxygenase beta subunit N terminal 12 44 2.8E-15 T 28-03-2018 IPR024756 Protocatechuate 3,4-dioxygenase beta subunit, N-terminal KEGG: 00362+1.13.11.3|KEGG: 00624+1.13.11.3 CI104_RS10310 5a24c1063a5c76887560c206b71311d3 124 Pfam PF13984 MsyB protein 3 124 1.1E-64 T 28-03-2018 IPR025729 MsyB protein CI104_RS03305 a97b37fb474eca217f18cd196cecccea 138 Gene3D G3DSA:1.10.260.40 60 138 6.5E-7 T 28-03-2018 CI104_RS03305 a97b37fb474eca217f18cd196cecccea 138 SMART SM00530 83 136 1.7E-6 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS03305 a97b37fb474eca217f18cd196cecccea 138 Pfam PF01381 Helix-turn-helix 87 135 7.9E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS03305 a97b37fb474eca217f18cd196cecccea 138 SUPERFAMILY SSF47413 83 137 3.26E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS26210 4bb809163456c9a420c0ad804270fb9e 492 Pfam PF01740 STAS domain 399 483 1.9E-10 T 28-03-2018 IPR002645 STAS domain CI104_RS26210 4bb809163456c9a420c0ad804270fb9e 492 Pfam PF00916 Sulfate permease family 164 343 1.6E-28 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CI104_RS26210 4bb809163456c9a420c0ad804270fb9e 492 Pfam PF00916 Sulfate permease family 15 144 1.6E-29 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CI104_RS26210 4bb809163456c9a420c0ad804270fb9e 492 Gene3D G3DSA:3.30.750.24 388 480 3.4E-15 T 28-03-2018 IPR002645 STAS domain CI104_RS26210 4bb809163456c9a420c0ad804270fb9e 492 SUPERFAMILY SSF52091 388 481 5.69E-13 T 28-03-2018 IPR002645 STAS domain CI104_RS05385 9c28624bf4ea9e8f1f42d2f07892d143 129 SUPERFAMILY SSF54593 3 128 7.92E-30 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS05385 9c28624bf4ea9e8f1f42d2f07892d143 129 Pfam PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily 7 126 1.3E-20 T 28-03-2018 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CI104_RS05385 9c28624bf4ea9e8f1f42d2f07892d143 129 Gene3D G3DSA:3.10.180.10 1 129 1.2E-25 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS23090 d072f80789e3801f8029820455749dfb 194 SUPERFAMILY SSF159709 13 193 5.1E-58 T 28-03-2018 CI104_RS23090 d072f80789e3801f8029820455749dfb 194 TIGRFAM TIGR03292 PhnH_redo: phosphonate C-P lyase system protein PhnH 7 190 8.0E-60 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CI104_RS23090 d072f80789e3801f8029820455749dfb 194 PIRSF PIRSF020680 1 194 3.0E-65 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CI104_RS23090 d072f80789e3801f8029820455749dfb 194 Pfam PF05845 Bacterial phosphonate metabolism protein (PhnH) 6 192 1.1E-62 T 28-03-2018 IPR008772 Bacterial phosphonate metabolism, PhnH GO:0019634 CI104_RS20710 08b31eac079b3b5ebc75782f00763773 172 Gene3D G3DSA:2.60.40.1090 24 172 9.0E-36 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20710 08b31eac079b3b5ebc75782f00763773 172 Pfam PF00419 Fimbrial protein 26 172 1.2E-15 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20710 08b31eac079b3b5ebc75782f00763773 172 SUPERFAMILY SSF49401 26 172 4.37E-32 T 28-03-2018 IPR008966 Adhesion domain CI104_RS28095 8de1db860ff2e926bef4962d255f4169 139 Pfam PF07128 Protein of unknown function (DUF1380) 1 137 4.4E-72 T 28-03-2018 IPR009811 Protein of unknown function DUF1380 CI104_RS12345 db8243e05d4f8c4e3677ed1d7391798a 401 Pfam PF07690 Major Facilitator Superfamily 14 341 1.6E-41 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS12345 db8243e05d4f8c4e3677ed1d7391798a 401 TIGRFAM TIGR00710 efflux_Bcr_CflA: drug resistance transporter, Bcr/CflA subfamily 4 377 7.1E-134 T 28-03-2018 IPR004812 Drug resistance transporter Bcr/CmlA subfamily GO:0005215|GO:0006810|GO:0016021 CI104_RS12345 db8243e05d4f8c4e3677ed1d7391798a 401 SUPERFAMILY SSF103473 7 375 5.49E-58 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12345 db8243e05d4f8c4e3677ed1d7391798a 401 Gene3D G3DSA:1.20.1250.20 193 391 1.0E-11 T 28-03-2018 CI104_RS12345 db8243e05d4f8c4e3677ed1d7391798a 401 Gene3D G3DSA:1.20.1250.20 6 192 3.9E-30 T 28-03-2018 CI104_RS05125 eaa71422fc1d521aaa71e74ec523f0a0 308 Gene3D G3DSA:3.40.50.300 1 259 1.9E-64 T 28-03-2018 CI104_RS05125 eaa71422fc1d521aaa71e74ec523f0a0 308 SUPERFAMILY SSF52540 3 232 1.49E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05125 eaa71422fc1d521aaa71e74ec523f0a0 308 Pfam PF00005 ABC transporter 21 165 2.6E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS05125 eaa71422fc1d521aaa71e74ec523f0a0 308 SMART SM00382 30 213 2.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05125 eaa71422fc1d521aaa71e74ec523f0a0 308 ProSitePatterns PS00211 ABC transporters family signature. 137 151 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS15100 52023db37b10243e60a5d3e1c683afea 192 SUPERFAMILY SSF55811 8 181 2.03E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS15100 52023db37b10243e60a5d3e1c683afea 192 Pfam PF00293 NUDIX domain 30 143 4.6E-15 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS15100 52023db37b10243e60a5d3e1c683afea 192 Gene3D G3DSA:3.90.79.10 4 189 7.4E-42 T 28-03-2018 CI104_RS15100 52023db37b10243e60a5d3e1c683afea 192 ProSitePatterns PS01293 Nudix CoA signature. 47 67 - T 28-03-2018 IPR000059 NUDIX hydrolase, NudL, conserved site GO:0000287|GO:0009132|GO:0016818|GO:0030145 Reactome: R-HSA-390918 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 SUPERFAMILY SSF55811 3 96 3.33E-30 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 Hamap MF_00297 NADH pyrophosphatase [nudC]. 1 257 47.299 T 28-03-2018 IPR022925 NADH pyrophosphatase NudC GO:0000210 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 Pfam PF00293 NUDIX domain 132 233 3.1E-16 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 ProSitePatterns PS00893 Nudix box signature. 159 180 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 Pfam PF09297 NADH pyrophosphatase zinc ribbon domain 93 124 2.0E-12 T 28-03-2018 IPR015376 Zinc ribbon, NADH pyrophosphatase GO:0016787|GO:0046872 KEGG: 00760+3.6.1.22|MetaCyc: PWY-5381|MetaCyc: PWY-7761 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 Gene3D G3DSA:3.90.79.10 126 257 2.3E-34 T 28-03-2018 CI104_RS23705 992bdde5d64f81347b10201b5473f32b 257 SUPERFAMILY SSF55811 79 241 1.49E-40 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS09360 197afea68384b1935dc7a344088b7d6c 135 SMART SM00530 6 61 3.4E-8 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS09360 197afea68384b1935dc7a344088b7d6c 135 Gene3D G3DSA:1.10.260.40 2 119 2.2E-15 T 28-03-2018 CI104_RS09360 197afea68384b1935dc7a344088b7d6c 135 SUPERFAMILY SSF47413 1 69 6.17E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS09360 197afea68384b1935dc7a344088b7d6c 135 Pfam PF01381 Helix-turn-helix 7 61 8.1E-9 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS25120 80ea72249ac8d82714673dc8921835f1 483 Gene3D G3DSA:3.40.50.410 298 464 5.0E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS25120 80ea72249ac8d82714673dc8921835f1 483 Hamap MF_01626 Protein ViaA [viaA]. 1 483 59.319 T 28-03-2018 IPR023481 Uncharacterised protein family ViaA CI104_RS25120 80ea72249ac8d82714673dc8921835f1 483 SMART SM00327 319 483 8.0E-12 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS25120 80ea72249ac8d82714673dc8921835f1 483 SUPERFAMILY SSF53300 318 459 3.34E-18 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS25120 80ea72249ac8d82714673dc8921835f1 483 Pfam PF05762 VWA domain containing CoxE-like protein 308 458 1.3E-10 T 28-03-2018 IPR008912 Uncharacterised protein family CoxE-like CI104_RS18740 b33af8e3c6ef4506519590662babdf06 243 Pfam PF13942 YfhG lipoprotein 48 221 1.1E-75 T 28-03-2018 IPR025262 Quorum-sensing regulator protein G CI104_RS18740 b33af8e3c6ef4506519590662babdf06 243 Gene3D G3DSA:1.20.58.60 127 235 0.0014 T 28-03-2018 CI104_RS18740 b33af8e3c6ef4506519590662babdf06 243 ProDom PD117379 LIPOPROTEIN YFHG HELIX ALPHA REGULATOR MEMBRANE TRANSCRIPTIONAL FAMILIIY EBP TWO-COMPONENT 18 222 1.0E-76 T 28-03-2018 CI104_RS28645 ddbab4983e8390ece51ab776b2781d81 235 SMART SM00052 6 225 3.9E-81 T 28-03-2018 IPR001633 EAL domain CI104_RS28645 ddbab4983e8390ece51ab776b2781d81 235 Gene3D G3DSA:3.20.20.450 9 219 1.2E-72 T 28-03-2018 IPR001633 EAL domain CI104_RS28645 ddbab4983e8390ece51ab776b2781d81 235 SUPERFAMILY SSF141868 13 217 6.41E-65 T 28-03-2018 IPR001633 EAL domain CI104_RS28645 ddbab4983e8390ece51ab776b2781d81 235 Pfam PF00563 EAL domain 12 217 4.8E-56 T 28-03-2018 IPR001633 EAL domain CI104_RS07550 f45f708f8966b5db30181ad894f3c4c4 361 Pfam PF00155 Aminotransferase class I and II 25 350 4.8E-42 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS07550 f45f708f8966b5db30181ad894f3c4c4 361 Gene3D G3DSA:3.40.640.10 38 248 1.0E-38 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS07550 f45f708f8966b5db30181ad894f3c4c4 361 SUPERFAMILY SSF53383 6 354 2.5E-78 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS07550 f45f708f8966b5db30181ad894f3c4c4 361 TIGRFAM TIGR01140 L_thr_O3P_dcar: threonine-phosphate decarboxylase 8 350 1.6E-102 T 28-03-2018 IPR005860 L-threonine-O-3-phosphate decarboxylase GO:0003824|GO:0009236 KEGG: 00860+4.1.1.81|MetaCyc: PWY-5443 CI104_RS07550 f45f708f8966b5db30181ad894f3c4c4 361 Gene3D G3DSA:3.90.1150.10 249 361 1.7E-20 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS07550 f45f708f8966b5db30181ad894f3c4c4 361 ProSitePatterns PS00105 Aminotransferases class-I pyridoxal-phosphate attachment site. 213 226 - T 28-03-2018 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site GO:0003824|GO:0009058|GO:0030170 CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 Gene3D G3DSA:3.40.50.720 397 562 1.9E-19 T 28-03-2018 CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 Pfam PF02254 TrkA-N domain 403 512 2.6E-24 T 28-03-2018 IPR003148 Regulator of K+ conductance, N-terminal GO:0006813 CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 Gene3D G3DSA:1.20.91.10 228 309 1.6E-12 T 28-03-2018 CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 SUPERFAMILY SSF51735 402 529 1.32E-28 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 Hamap MF_01412 Glutathione-regulated potassium-efflux system protein KefB [kefB]. 2 598 47.259 T 28-03-2018 IPR020884 Glutathione-regulated potassium-efflux system protein KefB GO:0005886|GO:0006813|GO:0015503 CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 Pfam PF00999 Sodium/hydrogen exchanger family 11 373 1.3E-68 T 28-03-2018 IPR006153 Cation/H+ exchanger GO:0006812|GO:0015299|GO:0016021|GO:0055085 CI104_RS01955 0dd7bd70bd2a7db6bcd483465ee3d380 601 TIGRFAM TIGR00932 2a37: transporter, monovalent cation:proton antiporter-2 (CPA2) family 14 283 6.8E-94 T 28-03-2018 IPR004771 K+/H+ exchanger GO:0006812|GO:0008324|GO:0016021 CI104_RS17730 2f3975011aa13529b4741431045b62b4 219 Pfam PF09335 SNARE associated Golgi protein 49 176 1.1E-26 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 14 27 9.8E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 9.8E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 SUPERFAMILY SSF46689 6 76 8.98E-20 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 Gene3D G3DSA:1.10.10.60 8 54 2.4E-20 T 28-03-2018 CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 60 8.6E-19 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 Gene3D G3DSA:1.10.357.10 55 196 3.1E-14 T 28-03-2018 CI104_RS27280 36cdf84c12e63a8d867cb8041bf57e85 202 SUPERFAMILY SSF48498 83 181 1.14E-12 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS20805 e4c9552fb8b6edcf3caf91ee4cc989d8 286 Gene3D G3DSA:1.10.3720.10 7 270 1.0E-39 T 28-03-2018 CI104_RS20805 e4c9552fb8b6edcf3caf91ee4cc989d8 286 SUPERFAMILY SSF161098 67 251 1.31E-27 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS20805 e4c9552fb8b6edcf3caf91ee4cc989d8 286 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 87 268 6.7E-26 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS26845 05389f29e3a25048256efde8c2757bd8 115 SUPERFAMILY SSF103481 5 107 1.44E-19 T 28-03-2018 CI104_RS26845 05389f29e3a25048256efde8c2757bd8 115 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.1E-32 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS25630 05389f29e3a25048256efde8c2757bd8 115 SUPERFAMILY SSF103481 5 107 1.44E-19 T 28-03-2018 CI104_RS25630 05389f29e3a25048256efde8c2757bd8 115 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.1E-32 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS19155 05389f29e3a25048256efde8c2757bd8 115 SUPERFAMILY SSF103481 5 107 1.44E-19 T 28-03-2018 CI104_RS19155 05389f29e3a25048256efde8c2757bd8 115 Pfam PF00893 Small Multidrug Resistance protein 3 94 7.1E-32 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS19980 9a8bda71b53f31b660f1ecf0def559e2 345 Pfam PF04389 Peptidase family M28 100 328 2.3E-33 T 28-03-2018 IPR007484 Peptidase M28 CI104_RS19980 9a8bda71b53f31b660f1ecf0def559e2 345 Gene3D G3DSA:3.40.630.10 28 334 1.9E-39 T 28-03-2018 CI104_RS19980 9a8bda71b53f31b660f1ecf0def559e2 345 SUPERFAMILY SSF53187 36 316 8.2E-37 T 28-03-2018 CI104_RS12340 e4e5ab14a735c99b69797300f29e8273 382 SUPERFAMILY SSF53335 117 373 1.33E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS12340 e4e5ab14a735c99b69797300f29e8273 382 PIRSF PIRSF003085 2 381 6.4E-130 T 28-03-2018 IPR003333 Mycolic acid cyclopropane synthase GO:0008610 CI104_RS12340 e4e5ab14a735c99b69797300f29e8273 382 Gene3D G3DSA:3.40.50.150 105 372 5.8E-66 T 28-03-2018 CI104_RS12340 e4e5ab14a735c99b69797300f29e8273 382 Pfam PF02353 Mycolic acid cyclopropane synthetase 108 368 6.9E-105 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS01095 4fea1333d409ab7d97baf7a63d173332 255 Pfam PF00563 EAL domain 29 242 4.8E-29 T 28-03-2018 IPR001633 EAL domain CI104_RS01095 4fea1333d409ab7d97baf7a63d173332 255 SUPERFAMILY SSF141868 27 252 3.4E-32 T 28-03-2018 IPR001633 EAL domain CI104_RS01095 4fea1333d409ab7d97baf7a63d173332 255 SMART SM00052 7 247 2.8E-41 T 28-03-2018 IPR001633 EAL domain CI104_RS01095 4fea1333d409ab7d97baf7a63d173332 255 Gene3D G3DSA:3.20.20.450 27 254 3.0E-31 T 28-03-2018 IPR001633 EAL domain CI104_RS10610 64945160fa35752532f0f85d82e7a137 180 Pfam PF05728 Uncharacterised protein family (UPF0227) 1 177 4.3E-71 T 28-03-2018 IPR008886 Uncharacterised protein family UPF0227/Esterase YqiA CI104_RS10610 64945160fa35752532f0f85d82e7a137 180 Hamap MF_01047 UPF0227 protein YcfP [ycfP]. 1 178 55.717 T 28-03-2018 IPR022987 Uncharacterised protein family UPF0227 CI104_RS10610 64945160fa35752532f0f85d82e7a137 180 SUPERFAMILY SSF53474 2 176 2.4E-8 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS09405 c3af5655223dbca503167315073c2fdc 290 Pfam PF13289 SIR2-like domain 119 257 4.9E-19 T 28-03-2018 CI104_RS09405 c3af5655223dbca503167315073c2fdc 290 Gene3D G3DSA:3.40.50.1220 83 187 0.015 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS26760 c28f1cac84aed9dc75e93b3e845005b7 180 Pfam PF13238 AAA domain 3 135 2.7E-9 T 28-03-2018 CI104_RS26760 c28f1cac84aed9dc75e93b3e845005b7 180 Gene3D G3DSA:3.40.50.300 1 180 7.7E-20 T 28-03-2018 CI104_RS26760 c28f1cac84aed9dc75e93b3e845005b7 180 SUPERFAMILY SSF52540 1 177 3.86E-15 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS01750 43660a8a1ab1ffdfde08fdee7be6c56b 710 Pfam PF07095 Intracellular growth attenuator protein IgaA 1 704 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CI104_RS01750 43660a8a1ab1ffdfde08fdee7be6c56b 710 ProDom PD147088 MEMBRANE INNER TRANSMEMBRANE IGAA HOMOLOG DEHYDROGENASE GROWTH ATTENUATOR INTRACELLULAR GENOME 3 697 0.0 T 28-03-2018 IPR010771 Intracellular growth attenuator IgaA GO:0009276|GO:0016021 CI104_RS05575 7783a78c4c0f09592dab91f143c7ee80 181 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 12 162 6.6E-58 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CI104_RS05575 7783a78c4c0f09592dab91f143c7ee80 181 PIRSF PIRSF028301 2 176 2.5E-60 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CI104_RS05575 7783a78c4c0f09592dab91f143c7ee80 181 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 8 162 8.7E-57 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CI104_RS16675 e6a8b5d19bea7670d6e506b9d8e7d30a 266 Gene3D G3DSA:3.40.1190.20 1 266 1.7E-65 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16675 e6a8b5d19bea7670d6e506b9d8e7d30a 266 SUPERFAMILY SSF53613 5 265 2.81E-81 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS16675 e6a8b5d19bea7670d6e506b9d8e7d30a 266 TIGRFAM TIGR00097 HMP-P_kinase: hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase 6 262 4.7E-107 T 28-03-2018 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase GO:0008972|GO:0009228 KEGG: 00730+2.7.1.49|MetaCyc: PWY-6910|MetaCyc: PWY-7356|MetaCyc: PWY-7357 CI104_RS16675 e6a8b5d19bea7670d6e506b9d8e7d30a 266 Pfam PF08543 Phosphomethylpyrimidine kinase 13 260 3.5E-94 T 28-03-2018 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase Reactome: R-HSA-6798695|Reactome: R-HSA-964975 CI104_RS24630 8677edbedd4d0df3d86fdbcda3d1265b 181 Pfam PF12724 Flavodoxin domain 4 152 1.1E-50 T 28-03-2018 IPR026816 Flavodoxin domain CI104_RS24630 8677edbedd4d0df3d86fdbcda3d1265b 181 Gene3D G3DSA:3.40.50.360 2 174 3.1E-20 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS24630 8677edbedd4d0df3d86fdbcda3d1265b 181 SUPERFAMILY SSF52218 2 173 3.22E-30 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS24630 8677edbedd4d0df3d86fdbcda3d1265b 181 ProSitePatterns PS00201 Flavodoxin signature. 5 21 - T 28-03-2018 IPR001226 Flavodoxin, conserved site GO:0009055|GO:0010181 CI104_RS18245 8d3c078c49cbd77923ad2ac7212f5ba5 453 Pfam PF06751 Ethanolamine ammonia lyase large subunit (EutB) 12 444 1.4E-201 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CI104_RS18245 8d3c078c49cbd77923ad2ac7212f5ba5 453 Gene3D G3DSA:3.20.20.70 143 449 5.3E-153 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS18245 8d3c078c49cbd77923ad2ac7212f5ba5 453 Gene3D G3DSA:2.30.170.30 1 53 1.5E-26 T 28-03-2018 CI104_RS18245 8d3c078c49cbd77923ad2ac7212f5ba5 453 Gene3D G3DSA:1.10.220.70 56 140 2.4E-29 T 28-03-2018 CI104_RS18245 8d3c078c49cbd77923ad2ac7212f5ba5 453 PIRSF PIRSF018788 1 453 3.3E-232 T 28-03-2018 IPR010628 Ethanolamine ammonia lyase large subunit GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 Gene3D G3DSA:2.170.130.10 20 185 1.2E-17 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 Pfam PF00593 TonB dependent receptor 250 725 7.3E-31 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 Pfam PF07715 TonB-dependent Receptor Plug Domain 72 168 2.3E-11 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 ProSitePatterns PS01156 TonB-dependent receptor proteins signature 2. 710 727 - T 28-03-2018 IPR010917 TonB-dependent receptor, conserved site CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 37 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 TIGRFAM TIGR01783 TonB-siderophor: TonB-dependent siderophore receptor 74 727 3.8E-115 T 28-03-2018 IPR010105 TonB-dependent siderophore receptor GO:0004872|GO:0005506|GO:0015891 CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 Gene3D G3DSA:2.40.170.20 186 727 2.6E-59 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS07110 95d8b813245ff6ba8c7644b0ca2466cc 727 SUPERFAMILY SSF56935 64 727 8.06E-97 T 28-03-2018 CI104_RS24335 039bd6c92e6b240c08b8781ee6ba773e 186 Gene3D G3DSA:3.40.50.300 9 186 5.3E-12 T 28-03-2018 CI104_RS24335 039bd6c92e6b240c08b8781ee6ba773e 186 SUPERFAMILY SSF52540 10 183 2.27E-14 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19790 5f499a674526b23a99206af1289273d8 83 Gene3D G3DSA:2.10.260.10 28 83 5.5E-4 T 28-03-2018 CI104_RS19790 5f499a674526b23a99206af1289273d8 83 Pfam PF08845 Toxin SymE, type I toxin-antitoxin system 16 75 4.8E-17 T 28-03-2018 IPR014944 Toxin SymE-like GO:0003723|GO:0005737|GO:0016070|GO:0016788 CI104_RS24065 8701e15828e7f781a4b30841093c7021 105 Pfam PF01340 Met Apo-repressor, MetJ 3 99 1.4E-58 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CI104_RS24065 8701e15828e7f781a4b30841093c7021 105 Hamap MF_00744 Met repressor [metJ]. 1 105 41.993 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CI104_RS24065 8701e15828e7f781a4b30841093c7021 105 ProDom PD020365 REPRESSOR MET BIOSYNTHESIS TRANSCRIPTION METJ METHIONINE REGULON DNA-BINDING REGULATORY AMINO-ACID 10 101 3.0E-48 T 28-03-2018 IPR002084 Methionine repressor MetJ GO:0003700|GO:0006355|GO:0006555 CI104_RS24065 8701e15828e7f781a4b30841093c7021 105 Gene3D G3DSA:1.10.140.10 3 103 3.9E-59 T 28-03-2018 IPR023453 Methionine repressor MetJ domain CI104_RS24065 8701e15828e7f781a4b30841093c7021 105 SUPERFAMILY SSF47598 2 105 7.34E-58 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS15405 304931eb6cf8ba95bd85c6ec6d54eac8 247 SUPERFAMILY SSF53335 20 242 4.82E-40 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS15405 304931eb6cf8ba95bd85c6ec6d54eac8 247 Hamap MF_01589 Carboxy-S-adenosyl-L-methionine synthase [cmoA]. 3 242 42.939 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CI104_RS15405 304931eb6cf8ba95bd85c6ec6d54eac8 247 TIGRFAM TIGR00740 TIGR00740: tRNA (cmo5U34)-methyltransferase 4 242 1.9E-133 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CI104_RS15405 304931eb6cf8ba95bd85c6ec6d54eac8 247 Pfam PF13649 Methyltransferase domain 60 158 6.4E-15 T 28-03-2018 CI104_RS15405 304931eb6cf8ba95bd85c6ec6d54eac8 247 Gene3D G3DSA:3.40.50.150 18 247 2.7E-41 T 28-03-2018 CI104_RS15405 304931eb6cf8ba95bd85c6ec6d54eac8 247 PIRSF PIRSF006325 1 243 8.1E-133 T 28-03-2018 IPR005271 Carboxy-S-adenosyl-L-methionine synthase GO:0002098 CI104_RS17520 446694b52bae8f651475a9f1ad5faa11 325 Pfam PF00146 NADH dehydrogenase 17 317 7.4E-121 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17520 446694b52bae8f651475a9f1ad5faa11 325 Hamap MF_01350 NAD(P)H-quinone oxidoreductase subunit 1, chloroplastic [ndhA]. 10 323 24.072 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17520 446694b52bae8f651475a9f1ad5faa11 325 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 211 224 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS17520 446694b52bae8f651475a9f1ad5faa11 325 ProSitePatterns PS00667 Respiratory-chain NADH dehydrogenase subunit 1 signature 1. 56 71 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS14345 c86dd11a5a45a6992e1cab812e22ce89 225 SUPERFAMILY SSF103501 1 224 2.09E-70 T 28-03-2018 IPR023234 NarG-like domain CI104_RS14345 c86dd11a5a45a6992e1cab812e22ce89 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 2.6E-80 T 28-03-2018 IPR023234 NarG-like domain CI104_RS14345 c86dd11a5a45a6992e1cab812e22ce89 225 Gene3D G3DSA:1.20.950.20 1 216 5.7E-43 T 28-03-2018 CI104_RS14345 c86dd11a5a45a6992e1cab812e22ce89 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 6.1E-124 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 SUPERFAMILY SSF56176 433 518 2.04E-16 T 28-03-2018 IPR016166 FAD-binding, type 2 GO:0003824|GO:0016614|GO:0050660|GO:0055114 CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 Pfam PF03741 Integral membrane protein TerC family 14 203 6.5E-49 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 SUPERFAMILY SSF54631 288 422 6.95E-23 T 28-03-2018 CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 SMART SM01091 431 512 6.9E-21 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 Gene3D G3DSA:3.10.580.10 281 428 9.4E-24 T 28-03-2018 CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 Pfam PF03471 Transporter associated domain 434 510 3.0E-16 T 28-03-2018 IPR005170 Transporter-associated domain CI104_RS15115 fbdae2f82c3330cc0bedb12f5dae48c3 519 Gene3D G3DSA:3.30.465.10 429 512 4.4E-18 T 28-03-2018 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 GO:0050660 CI104_RS19550 53f7351af175d6b97e4855092bc8d6de 108 Pfam PF05957 Bacterial protein of unknown function (DUF883) 16 107 2.1E-25 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CI104_RS19550 53f7351af175d6b97e4855092bc8d6de 108 Gene3D G3DSA:1.10.287.1060 5 84 5.6E-4 T 28-03-2018 CI104_RS02975 72fab5859236b3d14286677943bdca89 213 SMART SM00859 3 103 0.0043 T 28-03-2018 IPR000534 Semialdehyde dehydrogenase, NAD-binding GO:0016620|GO:0051287|GO:0055114 CI104_RS02975 72fab5859236b3d14286677943bdca89 213 Pfam PF13460 NAD(P)H-binding 8 188 8.9E-10 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS02975 72fab5859236b3d14286677943bdca89 213 SUPERFAMILY SSF51735 3 200 1.52E-40 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS02975 72fab5859236b3d14286677943bdca89 213 Gene3D G3DSA:3.40.50.720 2 211 8.1E-23 T 28-03-2018 CI104_RS10080 b6aab7943ea6cf58aac0422899a19171 207 Pfam PF01323 DSBA-like thioredoxin domain 57 196 1.3E-19 T 28-03-2018 IPR001853 DSBA-like thioredoxin domain GO:0015035 Reactome: R-HSA-156590 CI104_RS10080 b6aab7943ea6cf58aac0422899a19171 207 Gene3D G3DSA:3.40.30.10 35 207 1.8E-35 T 28-03-2018 CI104_RS10080 b6aab7943ea6cf58aac0422899a19171 207 ProSitePatterns PS00194 Thioredoxin family active site. 58 76 - T 28-03-2018 IPR017937 Thioredoxin, conserved site GO:0045454 CI104_RS10080 b6aab7943ea6cf58aac0422899a19171 207 SUPERFAMILY SSF52833 36 198 3.45E-37 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS09985 f249c362b7d76f3d71d39e7bb7123154 186 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 25 182 3.4E-58 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CI104_RS09985 f249c362b7d76f3d71d39e7bb7123154 186 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 184 1.0E-64 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CI104_RS09985 f249c362b7d76f3d71d39e7bb7123154 186 Gene3D G3DSA:3.40.30.10 12 185 0.001 T 28-03-2018 CI104_RS11330 9744849804f7235efc4f523e2884e055 197 Pfam PF06805 Bacteriophage lambda tail assembly protein I 3 85 1.1E-6 T 28-03-2018 IPR010654 Bacteriophage lambda tail assembly I CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 Gene3D G3DSA:1.10.287.1040 8 75 3.1E-26 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 TIGRFAM TIGR01280 xseB: exodeoxyribonuclease VII, small subunit 10 65 6.4E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 PIRSF PIRSF006488 1 80 3.6E-24 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 SUPERFAMILY SSF116842 2 74 1.7E-22 T 28-03-2018 CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 Pfam PF02609 Exonuclease VII small subunit 11 62 5.5E-21 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 Hamap MF_00337 Exodeoxyribonuclease 7 small subunit [xseB]. 10 70 16.785 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS06310 6beb8efbc6d16ec472bd84a6bc62e9c1 80 ProDom PD028235 EXONUCLEASE SMALL SUBUNIT VII EXODEOXYRIBONUCLEASE HYDROLASE NUCLEASE PROBABLE VII SIMILAR 1 50 6.0E-19 T 28-03-2018 IPR003761 Exonuclease VII, small subunit GO:0006308|GO:0008855|GO:0009318 CI104_RS21525 8bd9809dd6e7f8dddc13faaf999df6e2 213 Pfam PF01810 LysE type translocator 21 206 3.1E-24 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS11840 92b91032002b3f8f34f3602396b3bee0 452 Pfam PF02378 Phosphotransferase system, EIIC 30 363 1.7E-46 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS11840 92b91032002b3f8f34f3602396b3bee0 452 PIRSF PIRSF006351 1 448 1.7E-133 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS11840 92b91032002b3f8f34f3602396b3bee0 452 TIGRFAM TIGR00359 cello_pts_IIC: PTS system, cellobiose-specific IIC component 12 440 1.4E-173 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS11840 92b91032002b3f8f34f3602396b3bee0 452 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 12 440 1.4E-173 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 SUPERFAMILY SSF56784 10 209 3.47E-45 T 28-03-2018 IPR023214 HAD-like domain CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 9 20 1.8E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 101 114 1.8E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 131 147 1.8E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 149 169 1.8E-9 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 Gene3D G3DSA:1.10.150.240 30 78 1.0E-15 T 28-03-2018 IPR023198 Phosphoglycolate phosphatase, domain 2 CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 187 3.8E-25 T 28-03-2018 IPR023214 HAD-like domain CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 Gene3D G3DSA:3.40.50.1000 1 29 0.14 T 28-03-2018 IPR023214 HAD-like domain CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 Gene3D G3DSA:3.40.50.1000 79 215 2.0E-26 T 28-03-2018 IPR023214 HAD-like domain CI104_RS17575 c5514f5ac813b31e1dfc8df360605530 225 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 65 187 3.0E-17 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 Pfam PF00425 chorismate binding enzyme 242 502 6.0E-83 T 28-03-2018 IPR015890 Chorismate-utilising enzyme, C-terminal CI104_RS14170 638bed10e9601554a9802512d9640aac 520 TIGRFAM TIGR00565 trpE_proteo: anthranilate synthase component I 17 515 2.7E-265 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 PRINTS PR00095 Anthranilate synthase component I signature 350 363 6.9E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 PRINTS PR00095 Anthranilate synthase component I signature 444 458 6.9E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 PRINTS PR00095 Anthranilate synthase component I signature 364 377 6.9E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 PRINTS PR00095 Anthranilate synthase component I signature 459 473 6.9E-24 T 28-03-2018 IPR019999 Anthranilate synthase component I-like GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 PIRSF PIRSF001373 1 520 6.4E-249 T 28-03-2018 IPR005257 Anthranilate synthase component I, TrpE-like, bacterial GO:0004049|GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 SUPERFAMILY SSF56322 7 516 6.87E-164 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 Pfam PF04715 Anthranilate synthase component I, N terminal region 20 191 3.5E-12 T 28-03-2018 IPR006805 Anthranilate synthase component I, N-terminal GO:0009058 KEGG: 00400+4.1.3.27|KEGG: 00405+4.1.3.27|MetaCyc: PWY-5958|MetaCyc: PWY-6660|MetaCyc: PWY-6661 CI104_RS14170 638bed10e9601554a9802512d9640aac 520 Gene3D G3DSA:3.60.120.10 1 520 4.4E-160 T 28-03-2018 IPR005801 ADC synthase GO:0009058 CI104_RS06920 9f4ee2fb199b955edff3ec3c92fc39b6 223 SMART SM00382 32 215 1.7E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06920 9f4ee2fb199b955edff3ec3c92fc39b6 223 ProSitePatterns PS00211 ABC transporters family signature. 138 152 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS06920 9f4ee2fb199b955edff3ec3c92fc39b6 223 Gene3D G3DSA:3.40.50.300 5 222 1.9E-58 T 28-03-2018 CI104_RS06920 9f4ee2fb199b955edff3ec3c92fc39b6 223 Pfam PF00005 ABC transporter 23 166 1.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS06920 9f4ee2fb199b955edff3ec3c92fc39b6 223 SUPERFAMILY SSF52540 5 213 1.03E-53 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21780 c80619bd048c2537963ddd6590ff0465 407 Pfam PF14082 Domain of unknown function (DUF4263) 224 395 1.5E-33 T 28-03-2018 IPR025359 Protein of unknown function DUF4263 CI104_RS20910 09f44c582c24a4831be2c05449c6d432 398 Gene3D G3DSA:3.40.50.1100 76 183 1.2E-30 T 28-03-2018 CI104_RS20910 09f44c582c24a4831be2c05449c6d432 398 SUPERFAMILY SSF53686 31 350 6.42E-60 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS20910 09f44c582c24a4831be2c05449c6d432 398 TIGRFAM TIGR01747 diampropi_NH3ly: diaminopropionate ammonia-lyase family 23 391 5.2E-204 T 28-03-2018 IPR010081 Diaminopropionate ammonia-lyase GO:0008838|GO:0030170 CI104_RS20910 09f44c582c24a4831be2c05449c6d432 398 Gene3D G3DSA:3.40.50.1100 184 396 2.2E-25 T 28-03-2018 CI104_RS20910 09f44c582c24a4831be2c05449c6d432 398 TIGRFAM TIGR03528 2_3_DAP_am_ly: diaminopropionate ammonia-lyase 6 392 1.4E-193 T 28-03-2018 IPR019871 Diaminopropionate ammonia-lyase, subgroup GO:0008838 CI104_RS20910 09f44c582c24a4831be2c05449c6d432 398 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 41 374 2.3E-48 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS24130 2e1163809dc0510ba9b5b9cf8badd624 81 SUPERFAMILY SSF47661 8 79 6.59E-5 T 28-03-2018 IPR010989 SNARE GO:0016020|GO:0016192 CI104_RS24130 2e1163809dc0510ba9b5b9cf8badd624 81 Hamap MF_01196 Cell division protein ZapB [zapB]. 3 81 18.212 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CI104_RS24130 2e1163809dc0510ba9b5b9cf8badd624 81 Gene3D G3DSA:1.20.5.370 15 47 1.1E-12 T 28-03-2018 CI104_RS24130 2e1163809dc0510ba9b5b9cf8badd624 81 Gene3D G3DSA:1.20.5.370 48 81 1.5E-10 T 28-03-2018 CI104_RS24130 2e1163809dc0510ba9b5b9cf8badd624 81 Pfam PF06005 Cell division protein ZapB 3 80 1.9E-25 T 28-03-2018 IPR009252 Cell division protein ZapB GO:0005737|GO:0043093|GO:0090529 CI104_RS05140 5f940d75b74fb2b86ffb368c533581b0 407 SUPERFAMILY SSF88713 189 377 1.5E-26 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CI104_RS05140 5f940d75b74fb2b86ffb368c533581b0 407 Gene3D G3DSA:3.20.20.370 162 404 4.4E-34 T 28-03-2018 CI104_RS05140 5f940d75b74fb2b86ffb368c533581b0 407 Pfam PF01522 Polysaccharide deacetylase 227 364 1.9E-17 T 28-03-2018 IPR002509 NodB homology domain GO:0005975|GO:0016810 CI104_RS25420 364065ea487b131a71e6483bf4ac2750 503 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 196 279 1.1E-16 T 28-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CI104_RS25420 364065ea487b131a71e6483bf4ac2750 503 Gene3D G3DSA:3.40.30.10 226 304 0.15 T 28-03-2018 CI104_RS10935 4e3b8a8bb6ac4b2cc7f16cba16916365 273 SUPERFAMILY SSF52467 41 270 2.18E-74 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS10935 4e3b8a8bb6ac4b2cc7f16cba16916365 273 Hamap MF_01121 NAD-dependent protein deacylase [cobB]. 41 271 61.069 T 28-03-2018 IPR027546 Sirtuin, class III GO:0036054|GO:0036055|GO:0070403 Reactome: R-HSA-2151201 CI104_RS10935 4e3b8a8bb6ac4b2cc7f16cba16916365 273 Gene3D G3DSA:3.40.50.1220 31 273 1.8E-53 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS10935 4e3b8a8bb6ac4b2cc7f16cba16916365 273 Pfam PF02146 Sir2 family 48 221 4.1E-52 T 28-03-2018 IPR003000 Sirtuin family GO:0070403 CI104_RS17020 dc3f270b8aadcb34d5fa54fc38c6fee6 604 SUPERFAMILY SSF53850 49 590 6.98E-110 T 28-03-2018 CI104_RS17020 dc3f270b8aadcb34d5fa54fc38c6fee6 604 Gene3D G3DSA:3.40.190.10 204 314 1.2E-17 T 28-03-2018 CI104_RS17020 dc3f270b8aadcb34d5fa54fc38c6fee6 604 Gene3D G3DSA:3.10.105.10 315 560 1.8E-47 T 28-03-2018 CI104_RS17020 dc3f270b8aadcb34d5fa54fc38c6fee6 604 PIRSF PIRSF002741 3 592 4.4E-168 T 28-03-2018 IPR030678 Peptide/nickel binding protein, MppA-type GO:0043190|GO:0055085 CI104_RS17020 dc3f270b8aadcb34d5fa54fc38c6fee6 604 Gene3D G3DSA:3.90.76.10 63 203 1.8E-24 T 28-03-2018 CI104_RS17020 dc3f270b8aadcb34d5fa54fc38c6fee6 604 Pfam PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle 98 503 4.4E-70 T 28-03-2018 IPR000914 Solute-binding protein family 5 domain CI104_RS17400 7afadef61f874ccb10fb6623b22f108e 379 PIRSF PIRSF000390 1 379 7.6E-114 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CI104_RS17400 7afadef61f874ccb10fb6623b22f108e 379 Hamap MF_01167 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase [arnB]. 1 379 68.698 T 28-03-2018 IPR022850 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase, ArnB GO:0008483 KEGG: 00520+2.6.1.87 CI104_RS17400 7afadef61f874ccb10fb6623b22f108e 379 Gene3D G3DSA:3.90.1150.10 246 379 9.2E-36 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS17400 7afadef61f874ccb10fb6623b22f108e 379 SUPERFAMILY SSF53383 4 377 1.17E-112 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS17400 7afadef61f874ccb10fb6623b22f108e 379 Pfam PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family 13 374 1.6E-134 T 28-03-2018 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CI104_RS17400 7afadef61f874ccb10fb6623b22f108e 379 Gene3D G3DSA:3.40.640.10 3 245 7.4E-51 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 Hamap MF_00091 S-ribosylhomocysteine lyase [luxS]. 1 159 36.195 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 Pfam PF02664 S-Ribosylhomocysteinase (LuxS) 4 153 3.5E-62 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 ProDom PD013172 LYASE SYNTHESIS LUXS AUTOINDUCER-2 PRODUCTION AUTOINDUCER S-RIBOSYLHOMOCYSTEINE AI-2 QUORUM SENSING 9 155 2.0E-83 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 121 140 2.0E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 5 23 2.0E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 28 46 2.0E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 49 67 2.0E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 PRINTS PR01487 Bacterial autoinducer-2 (AI-2) production protein LuxS signature 77 95 2.0E-50 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 SUPERFAMILY SSF63411 4 162 4.3E-67 T 28-03-2018 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like GO:0003824|GO:0046872 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 Gene3D G3DSA:3.30.1360.80 3 161 1.4E-64 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS19635 14606b5d3f8051badbd98fd224ebb8ca 171 PIRSF PIRSF006160 1 162 2.2E-66 T 28-03-2018 IPR003815 S-ribosylhomocysteinase (LuxS) GO:0005506|GO:0009372|GO:0043768 KEGG: 00270+4.4.1.21|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS22960 7f02500eeff5938c641247b8dd6eaa1c 446 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 6 376 2.4E-149 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS22960 7f02500eeff5938c641247b8dd6eaa1c 446 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 443 4.7E-200 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS22960 7f02500eeff5938c641247b8dd6eaa1c 446 PIRSF PIRSF004539 1 444 1.1E-195 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS09760 8b1678fc8e942e1cd70261479d08c312 531 TIGRFAM TIGR03362 VI_chp_7: type VI secretion-associated protein, VC_A0119 family 29 488 3.7E-107 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CI104_RS09760 8b1678fc8e942e1cd70261479d08c312 531 Pfam PF16989 Type VI secretion, EvfE, EvfF, ImpA, BimE, VC_A0119, VasJ 228 488 6.4E-83 T 28-03-2018 IPR017739 Type VI secretion system-associated, VCA0119 CI104_RS09760 8b1678fc8e942e1cd70261479d08c312 531 Pfam PF06812 ImpA, N-terminal, type VI secretion system 34 137 3.9E-20 T 28-03-2018 IPR010657 ImpA, N-terminal CI104_RS09020 c1f3a46af46c72d2cebbca796c387d1c 230 Gene3D G3DSA:3.30.240.20 97 166 7.8E-20 T 28-03-2018 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CI104_RS09020 c1f3a46af46c72d2cebbca796c387d1c 230 Pfam PF04239 Protein of unknown function (DUF421) 104 168 9.4E-16 T 28-03-2018 IPR007353 Protein of unknown function DUF421 CI104_RS16710 19556c2827d75af34bb834e3de09929d 152 PIRSF PIRSF006187 1 152 2.1E-60 T 28-03-2018 IPR009736 Protein of unknown function DUF1307 CI104_RS16710 19556c2827d75af34bb834e3de09929d 152 Gene3D G3DSA:3.30.1830.10 28 151 1.1E-39 T 28-03-2018 CI104_RS16710 19556c2827d75af34bb834e3de09929d 152 Pfam PF06998 Protein of unknown function (DUF1307) 28 149 1.4E-42 T 28-03-2018 IPR009736 Protein of unknown function DUF1307 CI104_RS16710 19556c2827d75af34bb834e3de09929d 152 SUPERFAMILY SSF160704 24 152 3.01E-43 T 28-03-2018 IPR009736 Protein of unknown function DUF1307 CI104_RS01830 cd5cb98634f7c0be063e2a4d8d5c4e6f 261 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 218 231 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS01830 cd5cb98634f7c0be063e2a4d8d5c4e6f 261 SUPERFAMILY SSF53613 1 260 2.18E-53 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS01830 cd5cb98634f7c0be063e2a4d8d5c4e6f 261 Gene3D G3DSA:3.40.1190.20 3 261 3.1E-46 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS01830 cd5cb98634f7c0be063e2a4d8d5c4e6f 261 Pfam PF00294 pfkB family carbohydrate kinase 22 260 1.7E-32 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS16560 56290bfd9e30b60435986ad5e424ccce 378 Pfam PF10531 SLBB domain 173 220 3.9E-6 T 28-03-2018 IPR019554 Soluble ligand binding domain Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS16560 56290bfd9e30b60435986ad5e424ccce 378 Gene3D G3DSA:3.10.560.10 161 251 7.8E-25 T 28-03-2018 CI104_RS16560 56290bfd9e30b60435986ad5e424ccce 378 Gene3D G3DSA:3.10.560.10 252 345 1.2E-15 T 28-03-2018 CI104_RS16560 56290bfd9e30b60435986ad5e424ccce 378 Gene3D G3DSA:3.30.1950.10 89 160 1.2E-24 T 28-03-2018 CI104_RS16560 56290bfd9e30b60435986ad5e424ccce 378 Gene3D G3DSA:1.20.5.70 346 375 3.4E-15 T 28-03-2018 CI104_RS16560 56290bfd9e30b60435986ad5e424ccce 378 Pfam PF02563 Polysaccharide biosynthesis/export protein 82 165 4.0E-26 T 28-03-2018 IPR003715 Polysaccharide export protein GO:0015159|GO:0015774|GO:0016020 CI104_RS00330 04a4432d34de209aa00a6e393f00462c 300 Pfam PF00892 EamA-like transporter family 6 145 3.7E-20 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS00330 04a4432d34de209aa00a6e393f00462c 300 Pfam PF00892 EamA-like transporter family 158 290 3.4E-21 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS00330 04a4432d34de209aa00a6e393f00462c 300 SUPERFAMILY SSF103481 191 296 7.98E-13 T 28-03-2018 CI104_RS00330 04a4432d34de209aa00a6e393f00462c 300 TIGRFAM TIGR00950 2A78: carboxylate/amino acid/amine transporter 18 287 2.0E-73 T 28-03-2018 IPR004779 Carboxylate/Amino Acid/Amine Transporter GO:0016021 CI104_RS00330 04a4432d34de209aa00a6e393f00462c 300 SUPERFAMILY SSF103481 43 148 6.15E-7 T 28-03-2018 CI104_RS20825 d69197bd1ac196d72a4cb06cb79968d6 258 Gene3D G3DSA:3.40.50.300 1 255 1.9E-61 T 28-03-2018 CI104_RS20825 d69197bd1ac196d72a4cb06cb79968d6 258 ProSitePatterns PS00211 ABC transporters family signature. 135 149 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS20825 d69197bd1ac196d72a4cb06cb79968d6 258 SUPERFAMILY SSF52540 4 231 3.51E-69 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS20825 d69197bd1ac196d72a4cb06cb79968d6 258 Pfam PF00005 ABC transporter 23 162 2.4E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS20825 d69197bd1ac196d72a4cb06cb79968d6 258 SMART SM00382 32 212 1.7E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 Gene3D G3DSA:3.40.1160.10 1 310 2.3E-57 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 TIGRFAM TIGR00746 arcC: carbamate kinase 3 309 1.9E-116 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 264 279 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 73 91 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 179 197 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 108 127 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 156 175 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 39 58 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PRINTS PR01469 Bacterial carbamate kinase signature 209 224 8.0E-66 T 28-03-2018 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 PIRSF PIRSF000723 1 310 1.0E-122 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 SUPERFAMILY SSF53633 3 308 4.97E-84 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS20925 5a984e5a51c15a2c15788736891fdf9f 310 Pfam PF00696 Amino acid kinase family 3 282 2.7E-31 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS24010 4a84ef00dbb6540b73193ddf37a2afa7 359 TIGRFAM TIGR01427 PTS_IIC_fructo: PTS system, Fru family, IIC component 10 335 9.7E-90 T 28-03-2018 IPR006327 Phosphotransferase system, fructose IIC component GO:0005351|GO:0008982|GO:0009401|GO:0016021 CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 Pfam PF02769 AIR synthase related protein, C-terminal domain 177 339 1.0E-39 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 TIGRFAM TIGR00878 purM: phosphoribosylformylglycinamidine cyclo-ligase 7 335 3.2E-155 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 SUPERFAMILY SSF55326 7 170 2.09E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 Hamap MF_00741 Phosphoribosylformylglycinamidine cyclo-ligase [purM]. 7 344 47.294 T 28-03-2018 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase GO:0004641|GO:0005737|GO:0006189 KEGG: 00230+6.3.3.1|MetaCyc: PWY-6121|MetaCyc: PWY-6122|MetaCyc: PWY-6277|Reactome: R-HSA-73817 CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 Gene3D G3DSA:3.30.1330.10 31 161 5.4E-53 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 SUPERFAMILY SSF56042 171 342 6.73E-65 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 Gene3D G3DSA:3.90.650.10 171 345 3.0E-63 T 28-03-2018 IPR010918 AIR synthase-related protein, C-terminal domain CI104_RS18470 84383479d88b4e5de8d1f0a81ffa309d 345 Pfam PF00586 AIR synthase related protein, N-terminal domain 59 164 1.7E-15 T 28-03-2018 IPR016188 PurM-like, N-terminal domain CI104_RS16815 852b25b6e8c3dd56b5d0870ea9aa222f 233 Gene3D G3DSA:3.90.850.10 1 233 5.5E-71 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS16815 852b25b6e8c3dd56b5d0870ea9aa222f 233 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 28 228 2.7E-49 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS16815 852b25b6e8c3dd56b5d0870ea9aa222f 233 SUPERFAMILY SSF56529 21 233 6.15E-65 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS19180 eab40aaaab0789a6318d4f76587bb536 143 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 109 4.9E-24 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS19180 eab40aaaab0789a6318d4f76587bb536 143 SMART SM01007 8 143 1.7E-9 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS19180 eab40aaaab0789a6318d4f76587bb536 143 SUPERFAMILY SSF53639 1 108 4.32E-33 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS19180 eab40aaaab0789a6318d4f76587bb536 143 Gene3D G3DSA:3.40.225.10 2 138 5.1E-30 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS26915 eab40aaaab0789a6318d4f76587bb536 143 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 109 4.9E-24 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS26915 eab40aaaab0789a6318d4f76587bb536 143 SMART SM01007 8 143 1.7E-9 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS26915 eab40aaaab0789a6318d4f76587bb536 143 SUPERFAMILY SSF53639 1 108 4.32E-33 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS26915 eab40aaaab0789a6318d4f76587bb536 143 Gene3D G3DSA:3.40.225.10 2 138 5.1E-30 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS12330 8b6a56acf58c709ee6b28fb53488ff1b 457 PIRSF PIRSF006603 4 455 6.9E-60 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS12330 8b6a56acf58c709ee6b28fb53488ff1b 457 Pfam PF01554 MatE 17 177 5.0E-41 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS12330 8b6a56acf58c709ee6b28fb53488ff1b 457 Pfam PF01554 MatE 244 405 4.3E-37 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS12330 8b6a56acf58c709ee6b28fb53488ff1b 457 Hamap MF_00400 Multidrug resistance protein MdtK [mdtK]. 1 457 53.373 T 28-03-2018 IPR022913 Multidrug resistance protein MdtK CI104_RS12330 8b6a56acf58c709ee6b28fb53488ff1b 457 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 422 6.5E-125 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS12610 f71c224671b7074900c79ce02bb348c6 460 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 3 459 1.9E-182 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CI104_RS12610 f71c224671b7074900c79ce02bb348c6 460 Pfam PF13520 Amino acid permease 5 441 5.7E-77 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS12610 f71c224671b7074900c79ce02bb348c6 460 PIRSF PIRSF006060 1 459 1.5E-45 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 TIGRFAM TIGR00397 mauM_napG: MauM/NapG family ferredoxin-type protein 10 216 4.3E-70 T 28-03-2018 IPR004494 MauM/NapG ferredoxin-type protein CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Gene3D G3DSA:3.30.70.20 189 225 0.0087 T 28-03-2018 CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Pfam PF12838 4Fe-4S dicluster domain 60 115 2.1E-7 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 SUPERFAMILY SSF54862 59 204 1.05E-24 T 28-03-2018 CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 61 72 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Gene3D G3DSA:3.30.70.20 158 188 3.0E-7 T 28-03-2018 CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Pfam PF12800 4Fe-4S binding domain 136 155 0.038 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Pfam PF12800 4Fe-4S binding domain 183 196 0.2 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Gene3D G3DSA:3.30.70.20 30 69 4.7E-6 T 28-03-2018 CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Gene3D G3DSA:3.30.70.20 117 157 1.3E-8 T 28-03-2018 CI104_RS17165 17ebda027f24ecc061d4a3556c234135 231 Gene3D G3DSA:3.30.70.20 70 116 1.5E-10 T 28-03-2018 CI104_RS17585 bfc39408498477c04b3ca10f381cc3f6 151 Pfam PF04217 Protein of unknown function, DUF412 11 149 2.7E-58 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 CI104_RS17585 bfc39408498477c04b3ca10f381cc3f6 151 Hamap MF_01101 UPF0208 membrane protein YfbV [yfbV]. 9 151 36.885 T 28-03-2018 IPR007334 Uncharacterised protein family UPF0208 CI104_RS08980 f0c6a25e32cd2ec1bf348cf82ffb26d2 266 Gene3D G3DSA:3.40.50.970 1 266 7.8E-65 T 28-03-2018 CI104_RS08980 f0c6a25e32cd2ec1bf348cf82ffb26d2 266 SUPERFAMILY SSF52518 3 264 1.12E-74 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS08980 f0c6a25e32cd2ec1bf348cf82ffb26d2 266 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 19 259 3.3E-43 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS06295 211f0b30211afd82d778526740ccee4e 324 Pfam PF00248 Aldo/keto reductase family 15 312 2.3E-72 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS06295 211f0b30211afd82d778526740ccee4e 324 PRINTS PR00069 Aldo-keto reductase signature 142 159 2.8E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS06295 211f0b30211afd82d778526740ccee4e 324 PRINTS PR00069 Aldo-keto reductase signature 230 254 2.8E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS06295 211f0b30211afd82d778526740ccee4e 324 PRINTS PR00069 Aldo-keto reductase signature 111 129 2.8E-5 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS06295 211f0b30211afd82d778526740ccee4e 324 Gene3D G3DSA:3.20.20.100 1 321 7.5E-98 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS06295 211f0b30211afd82d778526740ccee4e 324 SUPERFAMILY SSF51430 1 320 1.7E-100 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 ProSitePatterns PS00922 Prokaryotic transglycosylases signature. 310 338 - T 28-03-2018 IPR000189 Prokaryotic transglycosylase, active site GO:0000270|GO:0008933|GO:0016020 CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 Gene3D G3DSA:1.10.530.10 278 451 5.4E-36 T 28-03-2018 CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 Hamap MF_02016 Membrane-bound lytic murein transglycosylase F [mltF]. 5 472 46.602 T 28-03-2018 IPR023703 Membrane-bound lytic murein transglycosylase F GO:0016837 CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 Gene3D G3DSA:3.40.190.10 39 277 3.8E-22 T 28-03-2018 CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 52 268 1.1E-27 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 SUPERFAMILY SSF53850 45 268 3.84E-33 T 28-03-2018 CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 SMART SM00062 44 269 3.2E-40 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 Pfam PF01464 Transglycosylase SLT domain 297 402 2.8E-25 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 SUPERFAMILY SSF53955 245 398 5.3E-35 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS18760 a422c506008560a7fbd4e648f5f6df9d 516 SUPERFAMILY SSF53955 433 443 5.3E-35 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS25910 c7a017f6e2d971dcd2f7cabd6a9b1b0e 95 Pfam PF05016 ParE toxin of type II toxin-antitoxin system, parDE 6 83 8.3E-12 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CI104_RS25910 c7a017f6e2d971dcd2f7cabd6a9b1b0e 95 Gene3D G3DSA:3.30.2310.20 1 95 2.6E-23 T 28-03-2018 CI104_RS25910 c7a017f6e2d971dcd2f7cabd6a9b1b0e 95 SUPERFAMILY SSF143011 1 82 2.09E-21 T 28-03-2018 IPR035095 Toxin RelE-like domain CI104_RS25910 c7a017f6e2d971dcd2f7cabd6a9b1b0e 95 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 5 86 2.8E-15 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CI104_RS01850 76eb79d7cb7363e877614ea2b84bcf3a 55 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 3.2E-34 T 28-03-2018 IPR025318 Protein of unknown function DUF4223 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 SUPERFAMILY SSF51430 5 268 5.24E-89 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PIRSF PIRSF000097 110 270 3.2E-53 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PIRSF PIRSF000097 1 115 5.9E-44 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PRINTS PR00069 Aldo-keto reductase signature 123 140 3.5E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PRINTS PR00069 Aldo-keto reductase signature 196 220 3.5E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PRINTS PR00069 Aldo-keto reductase signature 91 109 3.5E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PRINTS PR00069 Aldo-keto reductase signature 157 186 3.5E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 PRINTS PR00069 Aldo-keto reductase signature 37 61 3.5E-46 T 28-03-2018 IPR020471 Aldo/keto reductase GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 Pfam PF00248 Aldo/keto reductase family 18 260 3.2E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 ProSitePatterns PS00062 Aldo/keto reductase family signature 2. 123 140 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 Gene3D G3DSA:3.20.20.100 1 274 4.8E-92 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 ProSitePatterns PS00798 Aldo/keto reductase family signature 1. 41 58 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CI104_RS03935 936f82e7a32bd866482eab4eaff4ad2a 275 ProSitePatterns PS00063 Aldo/keto reductase family putative active site signature. 229 244 - T 28-03-2018 IPR018170 Aldo/keto reductase, conserved site GO:0016491|GO:0055114 CI104_RS16075 678de0ce1029bed80723e8048a3f6eb9 355 SUPERFAMILY SSF52733 6 342 2.09E-110 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16075 678de0ce1029bed80723e8048a3f6eb9 355 Pfam PF02277 Phosphoribosyltransferase 11 343 3.1E-116 T 28-03-2018 IPR003200 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16075 678de0ce1029bed80723e8048a3f6eb9 355 Gene3D G3DSA:1.10.1610.10 5 72 6.2E-28 T 28-03-2018 IPR023195 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, N-terminal GO:0008939|GO:0009236 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16075 678de0ce1029bed80723e8048a3f6eb9 355 Hamap MF_00230 Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase [cobT]. 13 348 33.12 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16075 678de0ce1029bed80723e8048a3f6eb9 355 TIGRFAM TIGR03160 cobT_DBIPRT: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 15 345 1.9E-114 T 28-03-2018 IPR017846 Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic GO:0008939|GO:0009163 KEGG: 00860+2.4.2.21|MetaCyc: PWY-5508|MetaCyc: PWY-5509|MetaCyc: PWY-6269 CI104_RS16075 678de0ce1029bed80723e8048a3f6eb9 355 Gene3D G3DSA:3.40.50.10210 73 329 4.9E-90 T 28-03-2018 CI104_RS20115 dc65f7317facc9bcfe5d14b8c2f2f72f 454 Gene3D G3DSA:3.40.50.450 124 452 2.5E-101 T 28-03-2018 CI104_RS20115 dc65f7317facc9bcfe5d14b8c2f2f72f 454 SUPERFAMILY SSF102405 119 330 9.01E-42 T 28-03-2018 CI104_RS20115 dc65f7317facc9bcfe5d14b8c2f2f72f 454 Gene3D G3DSA:3.30.1850.10 3 111 6.5E-48 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 CI104_RS20115 dc65f7317facc9bcfe5d14b8c2f2f72f 454 Pfam PF03641 Possible lysine decarboxylase 190 329 6.3E-33 T 28-03-2018 IPR031100 LOG family CI104_RS20115 dc65f7317facc9bcfe5d14b8c2f2f72f 454 Pfam PF11892 Domain of unknown function (DUF3412) 333 452 4.1E-55 T 28-03-2018 IPR021826 Domain of unknown function DUF3412 CI104_RS20115 dc65f7317facc9bcfe5d14b8c2f2f72f 454 Pfam PF14793 Domain of unknown function (DUF4478) 4 110 2.0E-46 T 28-03-2018 IPR027820 Domain of unknown function DUF4478 CI104_RS00650 d63b370c7ad12d248e6def43871c361e 143 SUPERFAMILY SSF52821 15 142 2.23E-32 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS00650 d63b370c7ad12d248e6def43871c361e 143 Pfam PF00581 Rhodanese-like domain 43 133 1.8E-18 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS00650 d63b370c7ad12d248e6def43871c361e 143 SMART SM00450 40 138 5.8E-24 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS00650 d63b370c7ad12d248e6def43871c361e 143 Gene3D G3DSA:3.40.250.10 21 143 4.0E-26 T 28-03-2018 IPR001763 Rhodanese-like domain CI104_RS22040 525e4d252dcc2ee60652e2328873d510 150 SUPERFAMILY SSF51197 1 149 3.02E-43 T 28-03-2018 CI104_RS22040 525e4d252dcc2ee60652e2328873d510 150 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 149 1.7E-58 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family CI104_RS22040 525e4d252dcc2ee60652e2328873d510 150 Gene3D G3DSA:2.60.120.370 1 150 1.0E-55 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family CI104_RS22040 525e4d252dcc2ee60652e2328873d510 150 Pfam PF04074 Domain of unknown function (DUF386) 1 147 1.4E-46 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family CI104_RS11565 6d15bb7a3cfe223d7f58918dc426603d 235 Pfam PF00117 Glutamine amidotransferase class-I 46 208 1.0E-15 T 28-03-2018 IPR017926 Glutamine amidotransferase CI104_RS11565 6d15bb7a3cfe223d7f58918dc426603d 235 SUPERFAMILY SSF52317 9 234 2.46E-42 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS11565 6d15bb7a3cfe223d7f58918dc426603d 235 Gene3D G3DSA:3.40.50.880 6 235 1.1E-31 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS10800 5ca3cdeb0a8d061ecd5b7e6f28eab6b0 173 TIGRFAM TIGR01611 tail_tube: phage major tail tube protein 4 173 6.6E-77 T 28-03-2018 IPR006498 Tail tube protein CI104_RS10800 5ca3cdeb0a8d061ecd5b7e6f28eab6b0 173 Pfam PF04985 Phage tail tube protein FII 7 172 3.8E-55 T 28-03-2018 IPR006498 Tail tube protein CI104_RS13515 1aa4118114285495f8408a9f7512d9ad 143 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 3 139 1.9E-25 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS13515 1aa4118114285495f8408a9f7512d9ad 143 Gene3D G3DSA:3.40.930.10 4 141 7.7E-24 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS13515 1aa4118114285495f8408a9f7512d9ad 143 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 48 64 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS13515 1aa4118114285495f8408a9f7512d9ad 143 SUPERFAMILY SSF55804 4 140 1.7E-28 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 Pfam PF02311 AraC-like ligand binding domain 26 160 3.4E-25 T 28-03-2018 IPR003313 AraC-type arabinose-binding/dimerisation domain GO:0006355 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 SMART SM00342 194 277 1.9E-31 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 SUPERFAMILY SSF51215 8 163 3.79E-37 T 28-03-2018 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 Gene3D G3DSA:1.10.10.60 176 229 7.2E-12 T 28-03-2018 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 Gene3D G3DSA:1.10.10.60 230 291 1.6E-12 T 28-03-2018 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 261 277 4.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 246 261 4.2E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 Gene3D G3DSA:2.60.120.280 7 170 5.2E-25 T 28-03-2018 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 231 273 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 SUPERFAMILY SSF46689 231 279 2.2E-12 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 SUPERFAMILY SSF46689 176 227 7.26E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS04775 4ae52fe2776976a05f7dbb7107417d95 292 Pfam PF12833 Helix-turn-helix domain 200 278 5.4E-20 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS27110 c945a02b35dad75b58f2c3710770b7af 818 Pfam PF13750 Bacterial Ig-like domain (group 3) 561 717 3.1E-65 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS27110 c945a02b35dad75b58f2c3710770b7af 818 Pfam PF12245 Bacterial Ig-like domain (group 3) 228 264 9.4E-13 T 28-03-2018 IPR022038 Bacterial Ig-like domain CI104_RS27110 c945a02b35dad75b58f2c3710770b7af 818 Pfam PF13752 Domain of unknown function (DUF4165) 20 143 1.7E-10 T 28-03-2018 IPR025429 Domain of unknown function DUF4165 CI104_RS27110 c945a02b35dad75b58f2c3710770b7af 818 Gene3D G3DSA:2.60.40.10 509 594 0.007 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS27110 c945a02b35dad75b58f2c3710770b7af 818 Gene3D G3DSA:2.60.40.10 595 707 0.0022 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 149 371 1.4E-68 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 SUPERFAMILY SSF51735 1 203 1.61E-43 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 Gene3D G3DSA:3.40.50.720 77 199 1.5E-27 T 28-03-2018 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 Gene3D G3DSA:3.40.50.720 1 76 2.0E-6 T 28-03-2018 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 1 123 1.6E-26 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 ProSitePatterns PS00974 Mannitol dehydrogenases signature. 150 162 - T 28-03-2018 IPR023027 Mannitol dehydrogenase, conserved site GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 PRINTS PR00084 Mannitol dehydrogenase signature 170 185 9.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 PRINTS PR00084 Mannitol dehydrogenase signature 3 13 9.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 PRINTS PR00084 Mannitol dehydrogenase signature 114 127 9.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 PRINTS PR00084 Mannitol dehydrogenase signature 150 163 9.7E-18 T 28-03-2018 IPR000669 Mannitol dehydrogenase GO:0003824|GO:0008152|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 Hamap MF_00196 Mannitol-1-phosphate 5-dehydrogenase [mtlD]. 1 378 41.508 T 28-03-2018 IPR023028 Mannitol-1-phosphate 5-dehydrogenase GO:0008926|GO:0019594|GO:0055114 KEGG: 00051+1.1.1.17|MetaCyc: PWY-6531 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 SUPERFAMILY SSF48179 204 378 7.82E-45 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS00715 17292419162ad6b0d6ce4e02e8101d1f 381 Gene3D G3DSA:1.10.1040.10 207 380 2.2E-47 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS22350 5dbd2753278cc6629be69ec1ec66ebc3 185 Gene3D G3DSA:3.40.30.10 19 184 1.4E-5 T 28-03-2018 CI104_RS22350 5dbd2753278cc6629be69ec1ec66ebc3 185 Pfam PF09695 Bacterial protein of unknown function (YtfJ_HI0045) 24 181 3.1E-75 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CI104_RS22350 5dbd2753278cc6629be69ec1ec66ebc3 185 TIGRFAM TIGR01626 ytfJ_HI0045: conserved hypothetical protein YtfJ-family, TIGR01626 1 183 1.9E-90 T 28-03-2018 IPR006513 Conserved hypothetical protein CHP01626, YtfJ CI104_RS17680 a7f65df6c856ec2d5741b3e5c84264ee 228 Gene3D G3DSA:1.10.3720.10 3 224 1.7E-37 T 28-03-2018 CI104_RS17680 a7f65df6c856ec2d5741b3e5c84264ee 228 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 8 114 4.9E-19 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS17680 a7f65df6c856ec2d5741b3e5c84264ee 228 SUPERFAMILY SSF161098 7 205 6.02E-38 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17680 a7f65df6c856ec2d5741b3e5c84264ee 228 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 28 219 3.8E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS10675 18b6e4f1d691cb2f80be9cd154e4c456 388 Pfam PF13401 AAA domain 142 285 4.7E-17 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS10675 18b6e4f1d691cb2f80be9cd154e4c456 388 SUPERFAMILY SSF52540 130 321 3.19E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10675 18b6e4f1d691cb2f80be9cd154e4c456 388 Gene3D G3DSA:1.10.260.40 2 68 0.0047 T 28-03-2018 CI104_RS10675 18b6e4f1d691cb2f80be9cd154e4c456 388 Gene3D G3DSA:3.40.50.300 129 301 1.7E-10 T 28-03-2018 CI104_RS10675 18b6e4f1d691cb2f80be9cd154e4c456 388 SMART SM00382 143 300 1.1E-4 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS03760 13174f13d7fa45da3c9af315f5f2daf4 206 Gene3D G3DSA:2.30.30.410 14 90 1.4E-10 T 28-03-2018 CI104_RS03760 13174f13d7fa45da3c9af315f5f2daf4 206 Gene3D G3DSA:1.20.5.50 91 170 2.1E-6 T 28-03-2018 CI104_RS03760 13174f13d7fa45da3c9af315f5f2daf4 206 SMART SM00287 23 88 2.0E-13 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type CI104_RS03760 13174f13d7fa45da3c9af315f5f2daf4 206 TIGRFAM TIGR04211 SH3_and_anchor: SH3 domain protein 27 204 2.4E-52 T 28-03-2018 IPR016476 SH3 domain protein CI104_RS03760 13174f13d7fa45da3c9af315f5f2daf4 206 PIRSF PIRSF006158 1 205 3.0E-71 T 28-03-2018 IPR016476 SH3 domain protein CI104_RS03760 13174f13d7fa45da3c9af315f5f2daf4 206 Pfam PF08239 Bacterial SH3 domain 35 83 4.3E-10 T 28-03-2018 IPR003646 SH3-like domain, bacterial-type CI104_RS12655 377902c594be1a7806a30491a9efa2ca 117 Hamap MF_00546 Acid shock protein [asr]. 10 117 17.218 T 28-03-2018 IPR023497 Acid shock protein CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 Pfam PF00176 SNF2 family N-terminal domain 180 401 2.9E-13 T 28-03-2018 IPR000330 SNF2-related, N-terminal domain GO:0005524 CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 SUPERFAMILY SSF52540 105 355 1.03E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 SUPERFAMILY SSF52540 278 344 5.89E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 SUPERFAMILY SSF52540 547 706 5.89E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 Gene3D G3DSA:3.40.50.300 157 457 3.4E-24 T 28-03-2018 CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 Gene3D G3DSA:3.40.50.300 533 687 3.6E-11 T 28-03-2018 CI104_RS21865 ea4d3d5b64a983223990e6af593477b9 1035 SMART SM00487 160 360 3.2E-13 T 28-03-2018 IPR014001 Helicase superfamily 1/2, ATP-binding domain CI104_RS27525 40a42ec596ba8c9a3013fd3d0d06e049 326 Pfam PF05598 Transposase domain (DUF772) 51 124 3.6E-21 T 28-03-2018 IPR008490 Transposase InsH, N-terminal CI104_RS27525 40a42ec596ba8c9a3013fd3d0d06e049 326 Pfam PF01609 Transposase DDE domain 138 312 2.7E-31 T 28-03-2018 IPR002559 Transposase, IS4-like GO:0003677|GO:0004803|GO:0006313 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 146 168 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 45 65 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 75 100 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 328 347 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 4 24 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 224 243 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 PRINTS PR00173 Glutamate-aspartate symporter signature 293 319 6.4E-31 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 Pfam PF00375 Sodium:dicarboxylate symporter family 10 402 4.7E-97 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 Gene3D G3DSA:1.10.3860.10 2 409 3.5E-101 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS02860 dbd72a289d2f499cbabda964a2ba38cb 432 SUPERFAMILY SSF118215 10 402 2.09E-103 T 28-03-2018 IPR001991 Sodium:dicarboxylate symporter GO:0015293|GO:0016021 CI104_RS00940 650eb944d97ff7b975aed8dab17c9345 233 Gene3D G3DSA:2.40.128.130 30 233 4.9E-11 T 28-03-2018 CI104_RS00940 650eb944d97ff7b975aed8dab17c9345 233 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 90 233 6.0E-5 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS00940 650eb944d97ff7b975aed8dab17c9345 233 SUPERFAMILY SSF103515 83 233 5.49E-11 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS00940 650eb944d97ff7b975aed8dab17c9345 233 Pfam PF03797 Autotransporter beta-domain 90 210 4.3E-11 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 ProDom PD012582 REPRESSOR TRANSCRIPTION TRP OPERON DNA-BINDING REGULATION HOMOLOG AROH FOR TRYPTOPHAN 10 101 1.0E-37 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 TIGRFAM TIGR01321 TrpR: trp operon repressor 12 103 3.9E-39 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 Gene3D G3DSA:1.10.1270.10 8 108 8.1E-29 T 28-03-2018 CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 Hamap MF_00475 Trp operon repressor [trpR]. 15 108 23.918 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 SUPERFAMILY SSF48295 5 105 3.45E-29 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 PIRSF PIRSF003196 1 108 9.0E-40 T 28-03-2018 IPR013335 Trp repressor, bacterial GO:0006355 CI104_RS04405 741ea31985c5323ec6949116bfa8b9ad 108 Pfam PF01371 Trp repressor protein 17 102 3.5E-28 T 28-03-2018 IPR000831 Trp repressor GO:0003700|GO:0005622|GO:0006355 CI104_RS17850 38f0e40f3931cbadfa53d8f3cf20b8d6 251 PRINTS PR01805 VacJ lipoprotein signature 30 43 5.6E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CI104_RS17850 38f0e40f3931cbadfa53d8f3cf20b8d6 251 PRINTS PR01805 VacJ lipoprotein signature 48 64 5.6E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CI104_RS17850 38f0e40f3931cbadfa53d8f3cf20b8d6 251 PRINTS PR01805 VacJ lipoprotein signature 138 155 5.6E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CI104_RS17850 38f0e40f3931cbadfa53d8f3cf20b8d6 251 PRINTS PR01805 VacJ lipoprotein signature 99 116 5.6E-35 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CI104_RS17850 38f0e40f3931cbadfa53d8f3cf20b8d6 251 Pfam PF04333 MlaA lipoprotein 29 222 6.0E-66 T 28-03-2018 IPR007428 MlaA lipoprotein GO:0016020 CI104_RS01170 3c1dddc85302c4ee92777999d58179a5 252 Gene3D G3DSA:3.40.50.150 57 250 4.0E-31 T 28-03-2018 CI104_RS01170 3c1dddc85302c4ee92777999d58179a5 252 Pfam PF04445 Putative SAM-dependent methyltransferase 19 246 8.6E-106 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CI104_RS01170 3c1dddc85302c4ee92777999d58179a5 252 Hamap MF_01523 Ribosomal RNA small subunit methyltransferase J [rsmJ]. 3 248 37.885 T 28-03-2018 IPR007536 Ribosomal RNA small subunit methyltransferase J GO:0008990|GO:0031167 CI104_RS01170 3c1dddc85302c4ee92777999d58179a5 252 SUPERFAMILY SSF53335 10 246 7.08E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS01170 3c1dddc85302c4ee92777999d58179a5 252 Gene3D G3DSA:3.40.1630.10 3 56 3.5E-22 T 28-03-2018 CI104_RS28630 73bc3f78d6a12772dba7c8b09db02810 123 Pfam PF13610 DDE domain 75 122 3.5E-21 T 28-03-2018 IPR032874 DDE domain CI104_RS28630 73bc3f78d6a12772dba7c8b09db02810 123 Gene3D G3DSA:1.10.10.10 4 63 1.4E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS28630 73bc3f78d6a12772dba7c8b09db02810 123 Gene3D G3DSA:3.30.420.10 66 123 1.7E-7 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS11985 1a4adf175621ba9c3190bbbe6e3624ac 154 SUPERFAMILY SSF54001 34 154 1.08E-39 T 28-03-2018 CI104_RS11985 1a4adf175621ba9c3190bbbe6e3624ac 154 Gene3D G3DSA:3.90.1720.10 35 154 9.1E-36 T 28-03-2018 CI104_RS11985 1a4adf175621ba9c3190bbbe6e3624ac 154 Pfam PF00877 NlpC/P60 family 47 153 7.7E-30 T 28-03-2018 IPR000064 Endopeptidase, NLPC/P60 domain CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 Gene3D G3DSA:3.40.50.300 122 283 2.6E-24 T 28-03-2018 CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 Hamap MF_01820 Putative ribosome biogenesis GTPase RsgA [rsgA]. 48 348 37.871 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 Pfam PF03193 RsgA GTPase 108 284 1.8E-56 T 28-03-2018 IPR010914 RsgA GTPase domain GO:0003924|GO:0005525 CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 TIGRFAM TIGR00157 TIGR00157: ribosome small subunit-dependent GTPase A 81 342 1.7E-99 T 28-03-2018 IPR004881 Ribosome biogenesis GTPase RsgA GO:0003924|GO:0005525 CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 Gene3D G3DSA:1.10.40.50 285 353 1.2E-22 T 28-03-2018 CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 Gene3D G3DSA:2.40.50.140 43 110 1.4E-19 T 28-03-2018 CI104_RS22590 4d47dd3fe89f177459f4cebd54667d31 358 SUPERFAMILY SSF52540 122 348 2.52E-57 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12165 b0b8f0992f7b2c46578601cff33ce45c 78 Gene3D G3DSA:1.20.5.190 22 73 1.8E-16 T 28-03-2018 CI104_RS12165 b0b8f0992f7b2c46578601cff33ce45c 78 Pfam PF04728 Lipoprotein leucine-zipper 26 78 6.4E-25 T 28-03-2018 IPR006817 Lipoprotein leucine-zipper GO:0019867 CI104_RS12165 b0b8f0992f7b2c46578601cff33ce45c 78 SUPERFAMILY SSF58042 24 74 4.58E-23 T 28-03-2018 CI104_RS12165 b0b8f0992f7b2c46578601cff33ce45c 78 PIRSF PIRSF002855 1 78 1.9E-29 T 28-03-2018 IPR016367 Murein-lipoprotein CI104_RS04980 c493958789234866c06982a8cd0f5c50 145 TIGRFAM TIGR02532 IV_pilin_GFxxxE: prepilin-type N-terminal cleavage/methylation domain 4 27 1.8E-9 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS04980 c493958789234866c06982a8cd0f5c50 145 ProSitePatterns PS00409 Prokaryotic N-terminal methylation site. 5 25 - T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS04980 c493958789234866c06982a8cd0f5c50 145 Pfam PF07963 Prokaryotic N-terminal methylation motif 1 25 1.6E-10 T 28-03-2018 IPR012902 Prokaryotic N-terminal methylation site CI104_RS04980 c493958789234866c06982a8cd0f5c50 145 SUPERFAMILY SSF54523 7 113 2.3E-22 T 28-03-2018 CI104_RS04980 c493958789234866c06982a8cd0f5c50 145 Gene3D G3DSA:3.30.700.10 7 139 1.4E-24 T 28-03-2018 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 SUPERFAMILY SSF46689 210 261 2.51E-8 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 Gene3D G3DSA:1.10.10.60 263 318 1.0E-10 T 28-03-2018 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 SMART SM00342 227 310 9.0E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 Gene3D G3DSA:1.10.10.60 210 262 5.4E-13 T 28-03-2018 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 SUPERFAMILY SSF52317 3 192 9.34E-45 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 Pfam PF01965 DJ-1/PfpI family 5 171 2.5E-12 T 28-03-2018 IPR002818 DJ-1/PfpI CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 SUPERFAMILY SSF46689 264 315 2.08E-10 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 Pfam PF12833 Helix-turn-helix domain 233 311 1.1E-17 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS05925 bb99e7df96ecbc34c39d337d65cf1417 322 Gene3D G3DSA:3.40.50.880 1 209 6.0E-52 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS23125 ce23a259203c2265017123c2b6bcb1e9 144 SUPERFAMILY SSF55729 5 138 1.86E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS23125 ce23a259203c2265017123c2b6bcb1e9 144 Pfam PF00583 Acetyltransferase (GNAT) family 45 133 5.8E-14 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS23125 ce23a259203c2265017123c2b6bcb1e9 144 Gene3D G3DSA:3.40.630.30 1 144 1.2E-23 T 28-03-2018 CI104_RS14815 60a271bef5f5f7677f634b638956ddd1 180 Pfam PF05069 Phage virion morphogenesis family 12 171 1.5E-18 T 28-03-2018 IPR006522 Phage virion morphogensis protein CI104_RS12705 aa4eed2465864dccabba2684ae241c09 204 SUPERFAMILY SSF89155 4 203 8.5E-57 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS12705 aa4eed2465864dccabba2684ae241c09 204 Gene3D G3DSA:1.10.3480.10 1 204 1.2E-55 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS12705 aa4eed2465864dccabba2684ae241c09 204 Pfam PF02613 Nitrate reductase delta subunit 42 163 4.6E-23 T 28-03-2018 IPR020945 DMSO/Nitrate reductase chaperone CI104_RS12705 aa4eed2465864dccabba2684ae241c09 204 PIRSF PIRSF004690 2 204 8.5E-64 T 28-03-2018 IPR026269 Tat proofreading chaperone DmsD-type CI104_RS12705 aa4eed2465864dccabba2684ae241c09 204 Hamap MF_00940 Tat proofreading chaperone DmsD [dmsD]. 5 204 42.418 T 28-03-2018 IPR028611 Tat proofreading chaperone DmsD GO:0005048 CI104_RS10035 6273eb41215801489c5d5219d9891362 329 Gene3D G3DSA:3.30.420.40 1 231 1.5E-5 T 28-03-2018 CI104_RS10035 6273eb41215801489c5d5219d9891362 329 Pfam PF05035 2-keto-3-deoxy-galactonokinase 7 295 1.7E-45 T 28-03-2018 IPR007729 2-keto-3-deoxy-galactonokinase GO:0008671|GO:0034194 KEGG: 00052+2.7.1.58|MetaCyc: PWY-7130 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 Gene3D G3DSA:2.40.50.100 46 123 7.0E-11 T 28-03-2018 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 SUPERFAMILY SSF111369 40 129 1.15E-8 T 28-03-2018 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 Pfam PF13533 Biotin-lipoyl like 48 94 1.9E-10 T 28-03-2018 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 Pfam PF13437 HlyD family secretion protein 214 318 3.7E-13 T 28-03-2018 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 327 342 1.5E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 PRINTS PR01490 Gram-negative bacterial RTX secretion protein D signature 58 78 1.5E-6 T 28-03-2018 IPR003997 RTX secretion protein D, Gram-negative bacteria GO:0009306|GO:0016020 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 Gene3D G3DSA:1.10.287.470 124 175 1.5E-9 T 28-03-2018 CI104_RS01200 e25a3589f73e8adf6a0217f81687a4b3 355 SUPERFAMILY SSF111369 115 178 6.93E-5 T 28-03-2018 CI104_RS14235 e0323a9742f14d621924a4dba2ce0255 98 SUPERFAMILY SSF54909 2 98 3.58E-31 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS14235 e0323a9742f14d621924a4dba2ce0255 98 Pfam PF03795 YCII-related domain 2 95 4.8E-30 T 28-03-2018 IPR005545 YCII-related CI104_RS14235 e0323a9742f14d621924a4dba2ce0255 98 Gene3D G3DSA:3.30.70.1060 1 98 1.0E-28 T 28-03-2018 CI104_RS00780 2ee3d045bd48f71dc8c223fda01d6be8 246 Gene3D G3DSA:2.40.160.20 7 246 2.2E-9 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS00780 2ee3d045bd48f71dc8c223fda01d6be8 246 Pfam PF06629 MltA-interacting protein MipA 26 246 1.1E-50 T 28-03-2018 IPR010583 MltA-interacting MipA CI104_RS13085 71854cb4b3f684f457b266e35920b31c 340 SUPERFAMILY SSF161098 199 319 8.37E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13085 71854cb4b3f684f457b266e35920b31c 340 SUPERFAMILY SSF161098 96 161 8.37E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13085 71854cb4b3f684f457b266e35920b31c 340 Gene3D G3DSA:1.10.3720.10 3 324 5.3E-41 T 28-03-2018 CI104_RS13085 71854cb4b3f684f457b266e35920b31c 340 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 115 334 5.0E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 Gene3D G3DSA:3.90.1150.10 370 468 1.6E-21 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 Gene3D G3DSA:1.10.10.10 1 68 7.9E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 SMART SM00345 7 66 2.2E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 Pfam PF00155 Aminotransferase class I and II 145 446 4.3E-33 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 SUPERFAMILY SSF53383 91 466 1.12E-92 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 Gene3D G3DSA:3.40.640.10 120 369 2.2E-47 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 SUPERFAMILY SSF46785 2 70 9.72E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13415 f9151a5677d3c015b49f05cfe20dc4cc 469 Pfam PF00392 Bacterial regulatory proteins, gntR family 3 66 5.0E-12 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS09460 f6d96ee283f8618528bf98cc51aa057c 204 Pfam PF00182 Chitinase class I 102 163 1.6E-6 T 28-03-2018 IPR000726 Glycoside hydrolase, family 19, catalytic GO:0004568|GO:0006032|GO:0016998 KEGG: 00520+3.2.1.14|MetaCyc: PWY-6855|MetaCyc: PWY-6902|MetaCyc: PWY-7822 CI104_RS09460 f6d96ee283f8618528bf98cc51aa057c 204 Gene3D G3DSA:3.30.20.10 94 151 4.6E-20 T 28-03-2018 CI104_RS09460 f6d96ee283f8618528bf98cc51aa057c 204 SUPERFAMILY SSF53955 20 203 1.18E-42 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 SUPERFAMILY SSF48179 164 293 4.76E-37 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 Hamap MF_02032 2-hydroxy-3-oxopropionate reductase [garR]. 3 296 61.888 T 28-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 Gene3D G3DSA:3.40.50.720 2 173 2.9E-35 T 28-03-2018 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 Gene3D G3DSA:1.10.1040.10 174 291 8.8E-31 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 ProSitePatterns PS00895 3-hydroxyisobutyrate dehydrogenase signature. 7 20 - T 28-03-2018 IPR002204 3-hydroxyisobutyrate dehydrogenase-related, conserved site GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 Pfam PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 166 283 5.5E-38 T 28-03-2018 IPR029154 3-hydroxyisobutyrate dehydrogenase, NAD-binding domain GO:0051287 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 Pfam PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase 4 163 5.1E-51 T 28-03-2018 IPR006115 6-phosphogluconate dehydrogenase, NADP-binding GO:0004616|GO:0055114 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 TIGRFAM TIGR01505 tartro_sem_red: 2-hydroxy-3-oxopropionate reductase 4 294 2.5E-154 T 28-03-2018 IPR006398 2-hydroxy-3-oxopropionate reductase GO:0008679|GO:0046487|GO:0055114 KEGG: 00630+1.1.1.60 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 PIRSF PIRSF000103 1 295 6.9E-95 T 28-03-2018 IPR015815 3-hydroxyisobutyrate dehydrogenase-related GO:0016491|GO:0055114 Reactome: R-HSA-70895 CI104_RS03130 01003b84819d70bc01c983f589785fb9 296 SUPERFAMILY SSF51735 2 164 3.38E-49 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS11635 d469b42cfa29e8a4a922967a507d1f5c 91 Pfam PF07023 Protein of unknown function (DUF1315) 5 78 5.7E-26 T 28-03-2018 IPR009749 Protein of unknown function DUF1315 CI104_RS05055 578be8249530d656d7136baf085c54a2 327 Gene3D G3DSA:3.40.718.10 2 327 9.2E-126 T 28-03-2018 CI104_RS05055 578be8249530d656d7136baf085c54a2 327 Hamap MF_00536 4-hydroxythreonine-4-phosphate dehydrogenase [pdxA]. 2 327 35.528 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CI104_RS05055 578be8249530d656d7136baf085c54a2 327 SUPERFAMILY SSF53659 4 327 1.28E-105 T 28-03-2018 CI104_RS05055 578be8249530d656d7136baf085c54a2 327 TIGRFAM TIGR00557 pdxA: 4-hydroxythreonine-4-phosphate dehydrogenase PdxA 6 327 1.6E-111 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CI104_RS05055 578be8249530d656d7136baf085c54a2 327 Pfam PF04166 Pyridoxal phosphate biosynthetic protein PdxA 39 323 9.8E-102 T 28-03-2018 IPR005255 PdxA family GO:0051287|GO:0055114 KEGG: 00630+1.1.1.26|KEGG: 00750+1.1.1.262|MetaCyc: PWY-7294|MetaCyc: PWY-7295 CI104_RS26685 0b2a5cf93bb1c9f7648d0bfef9d97498 218 Gene3D G3DSA:2.40.10.10 121 217 4.9E-4 T 28-03-2018 CI104_RS26685 0b2a5cf93bb1c9f7648d0bfef9d97498 218 SUPERFAMILY SSF50494 4 212 7.66E-12 T 28-03-2018 IPR009003 Peptidase S1, PA clan CI104_RS26685 0b2a5cf93bb1c9f7648d0bfef9d97498 218 Pfam PF00089 Trypsin 28 203 3.3E-5 T 28-03-2018 IPR001254 Serine proteases, trypsin domain GO:0004252|GO:0006508 CI104_RS08060 6210ec66a3423f9915ff4095a185894d 230 TIGRFAM TIGR02796 tolQ: protein TolQ 5 219 1.8E-93 T 28-03-2018 IPR014163 Tol-Pal system, TolQ GO:0015031|GO:0016021 CI104_RS08060 6210ec66a3423f9915ff4095a185894d 230 Pfam PF01618 MotA/TolQ/ExbB proton channel family 79 207 5.7E-42 T 28-03-2018 IPR002898 MotA/TolQ/ExbB proton channel GO:0006810|GO:0008565|GO:0016020 CI104_RS11880 5301a6e4c6dad1e7f1422948a1050c78 196 Pfam PF04307 LexA-binding, inner membrane-associated putative hydrolase 1 161 7.6E-34 T 28-03-2018 IPR007404 LexA-binding, inner membrane-associated putative hydrolase CI104_RS11880 5301a6e4c6dad1e7f1422948a1050c78 196 PIRSF PIRSF030780 1 195 6.5E-124 T 28-03-2018 IPR016956 Inner membrane protein YdjM CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 Pfam PF13604 AAA domain 967 1150 4.2E-34 T 28-03-2018 CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 SUPERFAMILY SSF52540 932 1111 5.52E-21 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 SUPERFAMILY SSF52540 1084 1146 1.25E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 SUPERFAMILY SSF52540 1219 1251 1.25E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 SUPERFAMILY SSF52540 1328 1465 1.25E-23 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 TIGRFAM TIGR02686 relax_trwC: conjugative relaxase domain 13 288 3.6E-106 T 28-03-2018 IPR014059 Conjugative relaxase, N-terminal CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 Gene3D G3DSA:3.40.50.300 814 1136 1.6E-17 T 28-03-2018 CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 TIGRFAM TIGR02760 TraI_TIGR: conjugative transfer relaxase protein TraI 1 1460 0.0 T 28-03-2018 IPR014129 Conjugative transfer relaxase protein TraI CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 Pfam PF08751 TrwC relaxase 10 283 4.1E-75 T 28-03-2018 IPR014862 TrwC relaxase CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 Pfam PF07057 DNA helicase TraI 1430 1548 8.8E-47 T 28-03-2018 IPR009767 DNA helicase, TraI type GO:0000746|GO:0003677|GO:0003678|GO:0005524|GO:0016818 CI104_RS27650 bedacf61a10d5e9bdc721d866f092a07 1746 SUPERFAMILY SSF55464 1 303 1.24E-103 T 28-03-2018 CI104_RS01455 22945dc69fcfbf927920f7895f43209a 425 Gene3D G3DSA:1.10.3470.10 99 401 5.5E-48 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS01455 22945dc69fcfbf927920f7895f43209a 425 Pfam PF11862 Domain of unknown function (DUF3382) 6 103 2.5E-24 T 28-03-2018 IPR021807 High-affinity branched-chain amino acid transport system permease, LivHM, N-terminal CI104_RS01455 22945dc69fcfbf927920f7895f43209a 425 Pfam PF02653 Branched-chain amino acid transport system / permease component 112 398 2.1E-60 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS27935 c46976efcf12983d8e1d1389b5905f66 708 Gene3D G3DSA:1.10.443.10 397 597 1.2E-19 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS27935 c46976efcf12983d8e1d1389b5905f66 708 Pfam PF00589 Phage integrase family 401 588 3.2E-8 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS27935 c46976efcf12983d8e1d1389b5905f66 708 SUPERFAMILY SSF56349 411 597 2.94E-20 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS09610 3108a65f75a6541c0fb6d5f534704460 193 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 71 191 2.0E-28 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 Gene3D G3DSA:1.20.5.1150 16 52 1.0E-17 T 28-03-2018 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 ProSitePatterns PS01181 Ribosomal protein S21 signature. 13 25 - T 28-03-2018 IPR018278 Ribosomal protein S21, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 Hamap MF_00358 30S ribosomal protein S21 [rpsU]. 1 57 21.283 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 Pfam PF01165 Ribosomal protein S21 4 56 6.3E-22 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 13 22 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 25 35 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 37 47 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 PRINTS PR00976 Ribosomal protein S21 family signature 5 13 2.8E-17 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 TIGRFAM TIGR00030 S21p: ribosomal protein bS21 2 59 4.1E-24 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS03670 e0f63aa874b218a4c9d359851efe3e90 71 ProDom PD005521 RIBOSOMAL S21 RIBONUCLEOPROTEIN 30S S21P A SSU SUBUNIT SEQUENCING DIRECT 15 56 1.0E-15 T 28-03-2018 IPR001911 Ribosomal protein S21 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS27600 d78306f9177ebccd8505412af2034377 92 Gene3D G3DSA:1.10.10.10 1 66 5.8E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27600 d78306f9177ebccd8505412af2034377 92 Pfam PF01527 Transposase 12 58 4.9E-12 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CI104_RS27600 d78306f9177ebccd8505412af2034377 92 SUPERFAMILY SSF48295 7 57 1.15E-11 T 28-03-2018 IPR010921 Trp repressor/replication initiator GO:0043565 CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 85 96 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 1.4E-12 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 Gene3D G3DSA:3.40.50.720 1 251 1.5E-68 T 28-03-2018 CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 SUPERFAMILY SSF51735 9 252 7.8E-78 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 11 28 3.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 85 96 3.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 3.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 3.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 3.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 3.0E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS21950 a3698ee58cfdc509149bd5814ced71ae 254 Pfam PF00106 short chain dehydrogenase 10 203 1.1E-63 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS07080 3db0319663ec5ce8e2a0121c87ad36f1 231 Pfam PF07238 PilZ domain 103 204 1.9E-6 T 28-03-2018 IPR009875 PilZ domain GO:0035438 CI104_RS07080 3db0319663ec5ce8e2a0121c87ad36f1 231 Gene3D G3DSA:2.40.10.220 104 225 1.0E-11 T 28-03-2018 CI104_RS28550 ef7d144d1b18700b7925e22a566f3be1 1009 Pfam PF01526 Tn3 transposase DDE domain 596 988 2.1E-108 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS28550 ef7d144d1b18700b7925e22a566f3be1 1009 Pfam PF13700 Domain of unknown function (DUF4158) 11 172 1.1E-36 T 28-03-2018 IPR025296 Domain of unknown function DUF4158 CI104_RS12270 00acc79972bb7b3bdd35e084ee7e853f 259 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 42 238 8.7E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12270 00acc79972bb7b3bdd35e084ee7e853f 259 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 16 80 1.6E-13 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS12270 00acc79972bb7b3bdd35e084ee7e853f 259 SUPERFAMILY SSF161098 17 224 3.66E-33 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS12270 00acc79972bb7b3bdd35e084ee7e853f 259 Gene3D G3DSA:1.10.3720.10 3 243 1.1E-30 T 28-03-2018 CI104_RS18985 b07e75cd1116def44d486c4a34a79982 124 Pfam PF10973 Protein of unknown function (DUF2799) 31 114 2.7E-21 T 28-03-2018 IPR021242 Protein of unknown function DUF2799 CI104_RS21695 b7395c8f91fbf1cc7b46b939d6774b33 349 Gene3D G3DSA:1.10.3470.10 29 307 6.6E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS21695 b7395c8f91fbf1cc7b46b939d6774b33 349 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 301 2.9E-46 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS15600 f2f619cd7f1782d25e694c6bf2f84119 185 SUPERFAMILY SSF52317 1 184 1.36E-41 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS15600 f2f619cd7f1782d25e694c6bf2f84119 185 Pfam PF01965 DJ-1/PfpI family 3 164 3.9E-30 T 28-03-2018 IPR002818 DJ-1/PfpI CI104_RS15600 f2f619cd7f1782d25e694c6bf2f84119 185 Gene3D G3DSA:3.40.50.880 1 185 3.7E-34 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS13400 6a250422fa06c9fda0edbcfbeeee80b0 314 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 107 308 8.5E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13400 6a250422fa06c9fda0edbcfbeeee80b0 314 SUPERFAMILY SSF161098 31 308 5.1E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13400 6a250422fa06c9fda0edbcfbeeee80b0 314 Gene3D G3DSA:1.10.3720.10 29 310 3.5E-33 T 28-03-2018 CI104_RS18440 650d44e89f58cd013c86cd2e9ae77c8b 318 SUPERFAMILY SSF56235 2 285 6.43E-75 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS18440 650d44e89f58cd013c86cd2e9ae77c8b 318 Pfam PF01112 Asparaginase 15 280 4.0E-63 T 28-03-2018 IPR000246 Peptidase T2, asparaginase 2 GO:0016787 CI104_RS18440 650d44e89f58cd013c86cd2e9ae77c8b 318 Gene3D G3DSA:3.60.20.30 150 285 2.9E-36 T 28-03-2018 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 SUPERFAMILY SSF54506 2 273 1.2E-55 T 28-03-2018 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 ProSitePatterns PS01326 Diaminopimelate epimerase signature. 64 78 - T 28-03-2018 IPR018510 Diaminopimelate epimerase, active site GO:0005737|GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 Gene3D G3DSA:3.10.310.10 1 124 3.9E-48 T 28-03-2018 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 Hamap MF_00197 Diaminopimelate epimerase [dapF]. 1 274 39.832 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 Gene3D G3DSA:3.10.310.10 125 261 1.9E-51 T 28-03-2018 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 TIGRFAM TIGR00652 DapF: diaminopimelate epimerase 1 273 3.1E-104 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 Pfam PF01678 Diaminopimelate epimerase 3 123 6.6E-35 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CI104_RS24805 2e816118440f76b75f957534a4c9acf0 274 Pfam PF01678 Diaminopimelate epimerase 152 266 5.3E-34 T 28-03-2018 IPR001653 Diaminopimelate epimerase, DapF GO:0008837|GO:0009089 KEGG: 00300+5.1.1.7|MetaCyc: PWY-2941|MetaCyc: PWY-5097 CI104_RS13260 200c2ec5d0a6bf265666bf04885b7884 189 SUPERFAMILY SSF50475 4 186 1.96E-39 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS13260 200c2ec5d0a6bf265666bf04885b7884 189 Pfam PF01613 Flavin reductase like domain 19 154 1.2E-13 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CI104_RS13260 200c2ec5d0a6bf265666bf04885b7884 189 SMART SM00903 14 158 4.4E-17 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CI104_RS13260 200c2ec5d0a6bf265666bf04885b7884 189 Gene3D G3DSA:2.30.110.10 1 188 1.3E-36 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS00220 59e3b40327fbf5ffec17e33a7f5c7cb2 444 Pfam PF00860 Permease family 32 405 2.1E-46 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS00220 59e3b40327fbf5ffec17e33a7f5c7cb2 444 PIRSF PIRSF005353 6 444 8.5E-173 T 28-03-2018 IPR026033 Purine permease PbuG-like CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 TIGRFAM TIGR00987 himA: integration host factor, alpha subunit 2 97 4.6E-55 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 Hamap MF_00380 Integration host factor subunit alpha [ihfA]. 1 97 31.158 T 28-03-2018 IPR005684 Integration host factor, alpha subunit GO:0003677|GO:0006310|GO:0006355 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 76 90 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 42 57 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 PRINTS PR01727 Prokaryotic integration host factor signature 60 73 3.1E-17 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 Pfam PF00216 Bacterial DNA-binding protein 3 91 2.7E-30 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 Gene3D G3DSA:4.10.520.10 1 99 2.4E-33 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 SUPERFAMILY SSF47729 3 93 1.16E-31 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 SMART SM00411 3 92 1.2E-43 T 28-03-2018 IPR000119 Histone-like DNA-binding protein GO:0003677 CI104_RS11965 59ec5d46b9f3ed5fc9297c10221bdeba 99 ProSitePatterns PS00045 Bacterial histone-like DNA-binding proteins signature. 48 67 - T 28-03-2018 IPR020816 Histone-like DNA-binding protein, conserved site GO:0003677 CI104_RS04570 c1665e7fe4419a2084a14affe123eca5 187 SUPERFAMILY SSF51182 11 162 6.79E-27 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS04570 c1665e7fe4419a2084a14affe123eca5 187 Pfam PF06560 Glucose-6-phosphate isomerase (GPI) 29 184 7.8E-24 T 28-03-2018 IPR010551 Glucose-6-phosphate isomerase, prokaryote GO:0004347|GO:0005737|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 CI104_RS04570 c1665e7fe4419a2084a14affe123eca5 187 Gene3D G3DSA:2.60.120.10 22 186 1.4E-12 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS10100 4f798a4863bc76b048c4250f2f62f8c3 175 PIRSF PIRSF017018 1 175 3.0E-73 T 28-03-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CI104_RS10100 4f798a4863bc76b048c4250f2f62f8c3 175 Pfam PF10634 Fe2+ transport protein 25 173 6.9E-69 T 28-03-2018 IPR018470 Periplasmic metal-binding protein Tp34-type CI104_RS14845 d28cb742c9b4298656fd2f8f4362a7e6 522 Pfam PF06074 Protein of unknown function (DUF935) 17 519 1.5E-167 T 28-03-2018 IPR009279 Protein of unknown function DUF935 CI104_RS00590 6e9f6f867c567ba671879d8775c5e322 358 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 104 319 6.5E-8 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CI104_RS00590 6e9f6f867c567ba671879d8775c5e322 358 Gene3D G3DSA:3.40.50.2000 32 191 1.9E-14 T 28-03-2018 CI104_RS00590 6e9f6f867c567ba671879d8775c5e322 358 Gene3D G3DSA:3.40.50.2000 202 358 2.6E-13 T 28-03-2018 CI104_RS00590 6e9f6f867c567ba671879d8775c5e322 358 SUPERFAMILY SSF53756 43 354 2.72E-35 T 28-03-2018 CI104_RS17190 fa857bd1f3369cc7d1801f79d5828b58 553 SUPERFAMILY SSF51905 28 91 1.68E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17190 fa857bd1f3369cc7d1801f79d5828b58 553 SUPERFAMILY SSF51905 144 359 1.68E-25 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17190 fa857bd1f3369cc7d1801f79d5828b58 553 Pfam PF06039 Malate:quinone oxidoreductase (Mqo) 31 519 2.2E-236 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CI104_RS17190 fa857bd1f3369cc7d1801f79d5828b58 553 Gene3D G3DSA:3.50.50.60 21 385 1.6E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS17190 fa857bd1f3369cc7d1801f79d5828b58 553 TIGRFAM TIGR01320 mal_quin_oxido: malate dehydrogenase (acceptor) 32 517 1.1E-209 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CI104_RS17190 fa857bd1f3369cc7d1801f79d5828b58 553 Hamap MF_00212 Probable malate:quinone oxidoreductase [mqo]. 28 519 54.381 T 28-03-2018 IPR006231 Malate:quinone-oxidoreductase GO:0006099|GO:0008924 KEGG: 00020+1.1.5.4|KEGG: 00620+1.1.5.4|MetaCyc: PWY-7254 CI104_RS16905 35268ab088efe9c5f5f27e69257e57be 661 Gene3D G3DSA:2.40.170.20 164 661 7.5E-78 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS16905 35268ab088efe9c5f5f27e69257e57be 661 Gene3D G3DSA:2.170.130.10 22 158 3.1E-37 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS16905 35268ab088efe9c5f5f27e69257e57be 661 Pfam PF07715 TonB-dependent Receptor Plug Domain 41 151 9.3E-29 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS16905 35268ab088efe9c5f5f27e69257e57be 661 ProSitePatterns PS00430 TonB-dependent receptor proteins signature 1. 1 35 - T 28-03-2018 IPR010916 TonB box, conserved site CI104_RS16905 35268ab088efe9c5f5f27e69257e57be 661 Pfam PF00593 TonB dependent receptor 228 660 7.4E-58 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS16905 35268ab088efe9c5f5f27e69257e57be 661 SUPERFAMILY SSF56935 26 661 7.56E-127 T 28-03-2018 CI104_RS18650 78bf9ccfdaddf57442137cfec015df1c 327 Gene3D G3DSA:3.40.50.2300 26 143 6.9E-20 T 28-03-2018 CI104_RS18650 78bf9ccfdaddf57442137cfec015df1c 327 Gene3D G3DSA:3.40.50.2300 144 299 3.0E-15 T 28-03-2018 CI104_RS18650 78bf9ccfdaddf57442137cfec015df1c 327 SUPERFAMILY SSF53822 27 325 4.35E-66 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS18650 78bf9ccfdaddf57442137cfec015df1c 327 Pfam PF13407 Periplasmic binding protein domain 30 287 6.8E-55 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS16420 cf1f02cbddd7ea765fa47424207767c9 200 Pfam PF02397 Bacterial sugar transferase 3 177 4.0E-65 T 28-03-2018 IPR003362 Bacterial sugar transferase CI104_RS28190 6bcc5f3c4b1efa59acbc9d373785b7ad 143 Pfam PF06290 Plasmid SOS inhibition protein (PsiB) 4 143 5.9E-78 T 28-03-2018 IPR009385 Plasmid SOS inhibition CI104_RS02515 e7c604b5e0f4c445be07b961a1be2701 655 Pfam PF04632 Fusaric acid resistance protein family 11 654 4.7E-163 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CI104_RS02515 e7c604b5e0f4c445be07b961a1be2701 655 Hamap MF_01545 p-hydroxybenzoic acid efflux pump subunit AaeB [aaeB]. 3 653 54.767 T 28-03-2018 IPR023706 Para-hydroxybenzoic acid efflux pump, subunit AaeB GO:0005886|GO:0006810 CI104_RS15265 d93e5494bec6200200521fa23013f210 124 SUPERFAMILY SSF81296 26 124 1.19E-26 T 28-03-2018 IPR014756 Immunoglobulin E-set CI104_RS15265 d93e5494bec6200200521fa23013f210 124 Gene3D G3DSA:2.60.40.1220 26 124 8.7E-31 T 28-03-2018 CI104_RS15265 d93e5494bec6200200521fa23013f210 124 Pfam PF04234 CopC domain 27 123 1.7E-25 T 28-03-2018 IPR007348 CopC domain GO:0005507|GO:0042597|GO:0046688 CI104_RS08890 22ffd5bed258383c47647a9ac550d315 234 TIGRFAM TIGR00667 aat: leucyl/phenylalanyl-tRNA--protein transferase 32 218 1.1E-87 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CI104_RS08890 22ffd5bed258383c47647a9ac550d315 234 Pfam PF03588 Leucyl/phenylalanyl-tRNA protein transferase 35 203 5.2E-71 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CI104_RS08890 22ffd5bed258383c47647a9ac550d315 234 SUPERFAMILY SSF55729 2 229 2.01E-93 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS08890 22ffd5bed258383c47647a9ac550d315 234 Hamap MF_00688 Leucyl/phenylalanyl-tRNA--protein transferase [aat]. 1 234 98.199 T 28-03-2018 IPR004616 Leucyl/phenylalanyl-tRNA-protein transferase GO:0008914|GO:0030163 MetaCyc: PWY-7801 CI104_RS16785 0fc68231a36bd80b2462d929b4fb3e97 195 Pfam PF06930 Protein of unknown function (DUF1282) 7 177 4.1E-45 T 28-03-2018 IPR009698 Protein of unknown function DUF1282 CI104_RS28025 04307d65d4ab0fc02e12f616cb0a99e5 176 Gene3D G3DSA:3.40.630.30 4 173 2.6E-14 T 28-03-2018 CI104_RS28025 04307d65d4ab0fc02e12f616cb0a99e5 176 Pfam PF13673 Acetyltransferase (GNAT) domain 92 156 2.4E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS28025 04307d65d4ab0fc02e12f616cb0a99e5 176 SUPERFAMILY SSF55729 17 155 3.49E-13 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS19465 7fdb1ee228f127dc58b8e8574ce95915 507 Gene3D G3DSA:3.20.20.450 244 502 1.1E-78 T 28-03-2018 IPR001633 EAL domain CI104_RS19465 7fdb1ee228f127dc58b8e8574ce95915 507 Pfam PF12792 CSS motif domain associated with EAL 34 218 6.1E-20 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CI104_RS19465 7fdb1ee228f127dc58b8e8574ce95915 507 SUPERFAMILY SSF141868 250 499 3.14E-75 T 28-03-2018 IPR001633 EAL domain CI104_RS19465 7fdb1ee228f127dc58b8e8574ce95915 507 Pfam PF00563 EAL domain 251 486 2.6E-63 T 28-03-2018 IPR001633 EAL domain CI104_RS19465 7fdb1ee228f127dc58b8e8574ce95915 507 SMART SM00052 245 491 3.3E-103 T 28-03-2018 IPR001633 EAL domain CI104_RS14840 5b5736f57b73dc97bae42d4c1a186a6c 264 Pfam PF04233 Phage Mu protein F like protein 56 185 1.1E-15 T 28-03-2018 IPR006528 Phage head morphogenesis domain CI104_RS18555 2532f1acf4a91884bd3328e430c2b5da 388 Hamap MF_01849 Dual-specificity RNA methyltransferase RlmN [rlmN]. 21 368 75.31 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS18555 2532f1acf4a91884bd3328e430c2b5da 388 Pfam PF04055 Radical SAM superfamily 124 293 3.5E-17 T 28-03-2018 IPR007197 Radical SAM GO:0003824|GO:0051536 CI104_RS18555 2532f1acf4a91884bd3328e430c2b5da 388 TIGRFAM TIGR00048 rRNA_mod_RlmN: 23S rRNA (adenine(2503)-C(2))-methyltransferase 17 373 1.9E-177 T 28-03-2018 IPR027492 Dual-specificity RNA methyltransferase RlmN GO:0030488|GO:0070475 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS18555 2532f1acf4a91884bd3328e430c2b5da 388 SUPERFAMILY SSF102114 120 329 4.19E-15 T 28-03-2018 CI104_RS18555 2532f1acf4a91884bd3328e430c2b5da 388 PIRSF PIRSF006004 14 382 1.0E-148 T 28-03-2018 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr GO:0005737|GO:0006364|GO:0008173 KEGG: 00670+2.1.1.19|MetaCyc: PWY-2201 CI104_RS18555 2532f1acf4a91884bd3328e430c2b5da 388 Gene3D G3DSA:3.20.20.70 30 384 2.4E-42 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 Pfam PF13377 Periplasmic binding protein-like domain 180 339 3.7E-29 T 28-03-2018 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 Pfam PF00356 Bacterial regulatory proteins, lacI family 14 59 4.2E-18 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 SMART SM00354 12 82 4.1E-28 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 Gene3D G3DSA:3.40.50.2300 65 184 3.1E-27 T 28-03-2018 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 SUPERFAMILY SSF53822 71 339 1.22E-52 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 Gene3D G3DSA:1.10.260.40 13 64 1.0E-19 T 28-03-2018 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 Gene3D G3DSA:3.40.50.2300 185 319 4.9E-29 T 28-03-2018 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 SUPERFAMILY SSF47413 12 70 2.91E-16 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS17630 a1f0ceff9a5fcc56ea03afdfd87db60b 339 ProSitePatterns PS00356 LacI-type HTH domain signature. 15 33 - T 28-03-2018 CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 Gene3D G3DSA:1.10.10.60 2 62 9.9E-14 T 28-03-2018 CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 Pfam PF00440 Bacterial regulatory proteins, tetR family 15 61 2.5E-12 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 Gene3D G3DSA:1.10.357.10 63 204 2.9E-18 T 28-03-2018 CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 15 28 1.2E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 PRINTS PR00455 TetR bacterial regulatory protein HTH signature 35 58 1.2E-7 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 SUPERFAMILY SSF48498 88 199 1.98E-5 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS08510 1e6ea3dd1a207edd2bb999a840123c03 204 SUPERFAMILY SSF46689 5 84 3.09E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS00710 0cdf6a300558ac3feaa0d47bb51b69b2 196 Pfam PF05068 Mannitol repressor 30 188 7.6E-60 T 28-03-2018 IPR007761 Mannitol repressor MtlR-like CI104_RS00710 0cdf6a300558ac3feaa0d47bb51b69b2 196 SUPERFAMILY SSF158668 27 188 1.31E-56 T 28-03-2018 CI104_RS00710 0cdf6a300558ac3feaa0d47bb51b69b2 196 Gene3D G3DSA:1.20.120.330 28 188 9.9E-56 T 28-03-2018 CI104_RS26005 08c0a674a1b4146f0ea007787eaf800f 393 Pfam PF01343 Peptidase family S49 188 338 6.8E-28 T 28-03-2018 IPR002142 Peptidase S49 GO:0006508|GO:0008233 CI104_RS26005 08c0a674a1b4146f0ea007787eaf800f 393 SUPERFAMILY SSF52096 48 148 1.69E-7 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS26005 08c0a674a1b4146f0ea007787eaf800f 393 SUPERFAMILY SSF52096 186 234 1.3E-17 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS26005 08c0a674a1b4146f0ea007787eaf800f 393 SUPERFAMILY SSF52096 263 326 1.3E-17 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS26005 08c0a674a1b4146f0ea007787eaf800f 393 Gene3D G3DSA:3.90.226.10 51 343 2.9E-24 T 28-03-2018 CI104_RS17385 412a7cb85ecc60c919198449a0e65518 180 Gene3D G3DSA:2.40.160.10 7 180 1.0E-10 T 28-03-2018 CI104_RS17385 412a7cb85ecc60c919198449a0e65518 180 SUPERFAMILY SSF56925 56 177 3.22E-9 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS17385 412a7cb85ecc60c919198449a0e65518 180 Pfam PF07437 YfaZ precursor 1 180 2.8E-82 T 28-03-2018 IPR009998 YfaZ CI104_RS23070 f135c98f511be5b92f72de5a20a7e903 338 Pfam PF12974 ABC transporter, phosphonate, periplasmic substrate-binding protein 35 277 2.2E-69 T 28-03-2018 CI104_RS23070 f135c98f511be5b92f72de5a20a7e903 338 TIGRFAM TIGR03431 PhnD: phosphonate ABC transporter, periplasmic phosphonate binding protein 2 291 1.0E-110 T 28-03-2018 IPR017797 Phosphonate ABC transporter, substrate-binding protein GO:0015716|GO:0043190 CI104_RS23070 f135c98f511be5b92f72de5a20a7e903 338 Gene3D G3DSA:3.40.190.10 28 132 2.7E-9 T 28-03-2018 CI104_RS23070 f135c98f511be5b92f72de5a20a7e903 338 Gene3D G3DSA:3.40.190.10 133 276 2.3E-28 T 28-03-2018 CI104_RS23070 f135c98f511be5b92f72de5a20a7e903 338 TIGRFAM TIGR01098 3A0109s03R: phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein 4 254 2.2E-91 T 28-03-2018 IPR005770 Phosphate/phosphite/phosphonate ABC transporter, periplasmic binding protein GO:0043190|GO:0055085 CI104_RS23070 f135c98f511be5b92f72de5a20a7e903 338 SUPERFAMILY SSF53850 54 244 4.08E-43 T 28-03-2018 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 Pfam PF00465 Iron-containing alcohol dehydrogenase 12 375 1.5E-116 T 28-03-2018 IPR001670 Alcohol dehydrogenase, iron-type GO:0016491|GO:0046872|GO:0055114 Reactome: R-HSA-880009 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 ProSitePatterns PS00913 Iron-containing alcohol dehydrogenases signature 1. 174 202 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 Gene3D G3DSA:1.20.1090.10 186 389 7.2E-63 T 28-03-2018 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 TIGRFAM TIGR02638 lactal_redase: lactaldehyde reductase 3 379 3.5E-186 T 28-03-2018 IPR013460 Lactaldehyde reductase KEGG: 00630+1.1.1.77|KEGG: 00640+1.1.1.77 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 SUPERFAMILY SSF56796 6 385 2.49E-121 T 28-03-2018 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 ProSitePatterns PS00060 Iron-containing alcohol dehydrogenases signature 2. 259 279 - T 28-03-2018 IPR018211 Alcohol dehydrogenase, iron-type, conserved site GO:0016491|GO:0046872|GO:0055114 CI104_RS09905 a55c6cf688e10eba595649f5a8be2b6d 389 Gene3D G3DSA:3.40.50.1970 9 184 5.4E-43 T 28-03-2018 CI104_RS05760 e0a8c02cc337b69cbf9b22c4d927c0b6 152 Gene3D G3DSA:3.40.50.2020 1 152 6.5E-27 T 28-03-2018 CI104_RS05760 e0a8c02cc337b69cbf9b22c4d927c0b6 152 SUPERFAMILY SSF53271 4 145 5.24E-32 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS05760 e0a8c02cc337b69cbf9b22c4d927c0b6 152 Hamap MF_01903 Xanthine phosphoribosyltransferase [gpt]. 1 152 40.201 T 28-03-2018 IPR023747 Xanthine-guanine phosphoribosyltransferase GO:0000310 KEGG: 00230+2.4.2.22 CI104_RS05760 e0a8c02cc337b69cbf9b22c4d927c0b6 152 Pfam PF00156 Phosphoribosyl transferase domain 12 145 2.0E-15 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CI104_RS10920 b4a30a74ebcb2dba3e8d8d52546978e7 233 SMART SM00382 34 222 1.1E-13 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS10920 b4a30a74ebcb2dba3e8d8d52546978e7 233 TIGRFAM TIGR02211 LolD_lipo_ex: lipoprotein releasing system, ATP-binding protein 5 224 2.1E-111 T 28-03-2018 IPR011924 Lipoprotein releasing system, ATP-binding protein GO:0005524|GO:0006810|GO:0016020 CI104_RS10920 b4a30a74ebcb2dba3e8d8d52546978e7 233 Gene3D G3DSA:3.40.50.300 1 231 3.2E-67 T 28-03-2018 CI104_RS10920 b4a30a74ebcb2dba3e8d8d52546978e7 233 ProSitePatterns PS00211 ABC transporters family signature. 146 160 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS10920 b4a30a74ebcb2dba3e8d8d52546978e7 233 SUPERFAMILY SSF52540 5 224 4.92E-70 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10920 b4a30a74ebcb2dba3e8d8d52546978e7 233 Pfam PF00005 ABC transporter 25 173 5.1E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS22080 38e72992b6a12b4ee753480b8a6b64f5 33 Pfam PF08052 PyrBI operon leader peptide 1 32 2.5E-24 T 28-03-2018 IPR012602 PyrBI operon leader peptide GO:0019856 CI104_RS14250 5c90603f070b773c8fb009206a536c3f 109 SUPERFAMILY SSF102816 3 109 2.09E-50 T 28-03-2018 IPR007376 dsDNA mimic, putative CI104_RS14250 5c90603f070b773c8fb009206a536c3f 109 Pfam PF04269 Protein of unknown function, DUF440 8 109 1.7E-46 T 28-03-2018 IPR007376 dsDNA mimic, putative CI104_RS14250 5c90603f070b773c8fb009206a536c3f 109 PIRSF PIRSF004916 1 109 6.3E-57 T 28-03-2018 IPR007376 dsDNA mimic, putative CI104_RS14250 5c90603f070b773c8fb009206a536c3f 109 Gene3D G3DSA:3.10.450.140 10 108 1.6E-45 T 28-03-2018 IPR007376 dsDNA mimic, putative CI104_RS14250 5c90603f070b773c8fb009206a536c3f 109 ProDom PD020447 UPF0263 YCIU HD0986 VV1228 UNCHARACTERIZED 3D-STRUCTURE VV13059 BCR PM0536 VC1208 7 109 7.0E-53 T 28-03-2018 IPR007376 dsDNA mimic, putative CI104_RS14250 5c90603f070b773c8fb009206a536c3f 109 Hamap MF_00680 UPF0263 protein YciU [yciU]. 5 109 35.147 T 28-03-2018 IPR007376 dsDNA mimic, putative CI104_RS02505 e6807ec5cc83f681ac62c68c1bc8ef12 67 Pfam PF07869 Protein of unknown function (DUF1656) 7 61 3.6E-20 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CI104_RS02505 e6807ec5cc83f681ac62c68c1bc8ef12 67 Hamap MF_01546 Protein AaeX [aaeX]. 1 67 24.567 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CI104_RS09450 b476cc0180b81a0c35efe368a609d5a6 130 Pfam PF16931 Putative phage holin 1 123 3.8E-39 T 28-03-2018 IPR032637 Putative phage holin-like CI104_RS10855 4456705a1a7dfc1bda036176d7e0c6ad 192 Pfam PF09684 Phage tail protein (Tail_P2_I) 16 162 3.3E-31 T 28-03-2018 IPR006521 Tail protein I CI104_RS10855 4456705a1a7dfc1bda036176d7e0c6ad 192 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 18 120 1.3E-10 T 28-03-2018 IPR006521 Tail protein I CI104_RS23750 44c5f30e77d05d54bd6aba6df6de61b3 102 Gene3D G3DSA:3.40.50.2300 2 102 3.2E-39 T 28-03-2018 CI104_RS23750 44c5f30e77d05d54bd6aba6df6de61b3 102 Pfam PF02302 PTS system, Lactose/Cellobiose specific IIB subunit 3 95 5.2E-26 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS23750 44c5f30e77d05d54bd6aba6df6de61b3 102 SUPERFAMILY SSF52794 1 101 6.8E-36 T 28-03-2018 IPR003501 Phosphotransferase system, EIIB component, type 2/3 GO:0008982|GO:0009401 CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 Gene3D G3DSA:3.40.50.300 27 179 1.7E-9 T 28-03-2018 CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 SUPERFAMILY SSF52540 32 226 3.95E-22 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 Gene3D G3DSA:1.10.8.60 182 248 1.8E-14 T 28-03-2018 CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 Pfam PF00308 Bacterial dnaA protein 31 227 2.5E-16 T 28-03-2018 IPR013317 Chromosomal replication initiator protein DnaA CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 Hamap MF_01158 DnaA regulatory inactivator Hda [hda]. 20 248 57.785 T 28-03-2018 IPR022864 DnaA regulatory inactivator Hda, Enterobacteriaceae CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 TIGRFAM TIGR03420 DnaA_homol_Hda: DnaA regulatory inactivator Hda 21 247 2.9E-84 T 28-03-2018 IPR017788 DnaA regulatory inactivator Hda GO:0032297 CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 58 78 2.2E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS18450 fe27dd97b765b3a48f1690b66fe847e5 248 PRINTS PR00051 Bacterial chromosomal replication initiator (DNAA) signature 146 173 2.2E-7 T 28-03-2018 IPR020591 Chromosomal replication control, initiator DnaA-like CI104_RS27985 8b3691ea0ad539960bd4e70183cb58fa 507 Pfam PF03050 Transposase IS66 family 176 457 1.9E-100 T 28-03-2018 IPR004291 Transposase, IS66 CI104_RS27985 8b3691ea0ad539960bd4e70183cb58fa 507 Pfam PF13007 Transposase C of IS166 homeodomain 39 110 2.4E-13 T 28-03-2018 IPR024463 Transposase TnpC, homeodomain CI104_RS27985 8b3691ea0ad539960bd4e70183cb58fa 507 Pfam PF13817 IS66 C-terminal element 464 501 3.5E-16 T 28-03-2018 CI104_RS27985 8b3691ea0ad539960bd4e70183cb58fa 507 Gene3D G3DSA:1.20.120.330 2 407 2.5E-8 T 28-03-2018 CI104_RS27985 8b3691ea0ad539960bd4e70183cb58fa 507 Pfam PF13005 zinc-finger binding domain of transposase IS66 117 161 2.4E-12 T 28-03-2018 IPR024474 Zinc-finger binding domain of transposase IS66 CI104_RS14870 0f418a0e64ddcc30e869f0ecc4e9fc90 95 SUPERFAMILY SSF46785 7 67 2.04E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14870 0f418a0e64ddcc30e869f0ecc4e9fc90 95 Gene3D G3DSA:1.10.10.10 3 79 4.8E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08025 a641907d1979ff9d59b7de6cc2ca0be7 462 Pfam PF13941 MutL protein 4 455 5.6E-131 T 28-03-2018 IPR006230 Protein MutL CI104_RS08025 a641907d1979ff9d59b7de6cc2ca0be7 462 PIRSF PIRSF004729 1 462 8.2E-199 T 28-03-2018 IPR006230 Protein MutL CI104_RS08025 a641907d1979ff9d59b7de6cc2ca0be7 462 TIGRFAM TIGR01319 glmL_fam: conserved hypothetical protein 6 461 6.8E-239 T 28-03-2018 IPR006230 Protein MutL CI104_RS08025 a641907d1979ff9d59b7de6cc2ca0be7 462 Gene3D G3DSA:3.30.420.40 1 274 1.1E-4 T 28-03-2018 CI104_RS12275 6699421aeb011e9a507400c2ee22b582 272 ProSitePatterns PS00211 ABC transporters family signature. 160 174 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS12275 6699421aeb011e9a507400c2ee22b582 272 Pfam PF00005 ABC transporter 39 188 9.1E-36 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS12275 6699421aeb011e9a507400c2ee22b582 272 Gene3D G3DSA:3.40.50.300 20 270 7.5E-78 T 28-03-2018 CI104_RS12275 6699421aeb011e9a507400c2ee22b582 272 SMART SM00382 48 236 1.4E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS12275 6699421aeb011e9a507400c2ee22b582 272 SUPERFAMILY SSF52540 26 258 3.25E-79 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12275 6699421aeb011e9a507400c2ee22b582 272 PIRSF PIRSF039085 20 264 7.9E-102 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS15635 c9b9322f6bf45ae20ab1b005dfd2c193 165 SUPERFAMILY SSF47240 4 161 3.96E-55 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS15635 c9b9322f6bf45ae20ab1b005dfd2c193 165 Pfam PF00210 Ferritin-like domain 7 142 1.0E-34 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CI104_RS15635 c9b9322f6bf45ae20ab1b005dfd2c193 165 Gene3D G3DSA:1.20.1260.10 1 161 8.7E-41 T 28-03-2018 IPR012347 Ferritin-related CI104_RS20095 95b0e01f735bc3ef7cebb1b1ecd3fb5c 264 SUPERFAMILY SSF55120 2 238 8.0E-62 T 28-03-2018 IPR020103 Pseudouridine synthase, catalytic domain GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS20095 95b0e01f735bc3ef7cebb1b1ecd3fb5c 264 Gene3D G3DSA:3.30.2350.10 1 237 1.9E-61 T 28-03-2018 CI104_RS20095 95b0e01f735bc3ef7cebb1b1ecd3fb5c 264 Pfam PF00849 RNA pseudouridylate synthase 11 170 5.9E-29 T 28-03-2018 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS20095 95b0e01f735bc3ef7cebb1b1ecd3fb5c 264 ProSitePatterns PS01129 Rlu family of pseudouridine synthase signature. 50 64 - T 28-03-2018 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site GO:0001522|GO:0003723|GO:0009451|GO:0009982 CI104_RS16695 38306455ada336c658c265789bd76d89 108 Gene3D G3DSA:3.10.450.160 26 104 1.8E-13 T 28-03-2018 CI104_RS16695 38306455ada336c658c265789bd76d89 108 Pfam PF11776 Nickel/cobalt transporter regulator 48 97 1.8E-19 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CI104_RS16695 38306455ada336c658c265789bd76d89 108 ProDom PD456999 SIGNAL PRECURSOR TRANSMEMBRANE MEMBRANE YOHN INTEGRAL EXPORTED SIMILAR LIPOPROTEIN LIPOPROTEIN 28 97 5.0E-32 T 28-03-2018 IPR024572 Nickel/cobalt homeostasis protein RcnB CI104_RS01020 8fb52f57b06066d9ace1620975265ef9 35 Pfam PF13940 Toxin Ldr, type I toxin-antitoxin system 1 35 2.2E-20 T 28-03-2018 IPR025253 Type I toxin-antitoxin system, toxin Ldr CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 TIGRFAM TIGR00165 S18: ribosomal protein bS18 4 72 8.1E-38 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 SUPERFAMILY SSF46911 3 74 7.06E-29 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 38 45 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 46 60 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 28 38 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 PRINTS PR00974 Ribosomal protein S18 family signature 60 70 1.3E-18 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 ProDom PD002239 RIBOSOMAL S18 RIBONUCLEOPROTEIN 30S RRNA-BINDING RNA-BINDING CHLOROPLAST PLASTID MITOCHONDRIAL ACETYLATION 21 71 3.0E-22 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 Pfam PF01084 Ribosomal protein S18 19 68 9.1E-25 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 Hamap MF_00270 30S ribosomal protein S18 [rpsR]. 2 73 21.313 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 Gene3D G3DSA:4.10.640.10 1 75 1.5E-31 T 28-03-2018 IPR001648 Ribosomal protein S18 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22415 4d776f2becc435db4210658806b3f9df 75 ProSitePatterns PS00057 Ribosomal protein S18 signature. 21 44 - T 28-03-2018 IPR018275 Ribosomal protein S18, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 SUPERFAMILY SSF109604 211 328 1.94E-7 T 28-03-2018 CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 SUPERFAMILY SSF109604 18 179 1.76E-16 T 28-03-2018 CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 Gene3D G3DSA:1.10.3210.10 2 185 2.9E-22 T 28-03-2018 CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 Pfam PF01966 HD domain 26 138 1.6E-13 T 28-03-2018 IPR006674 HD domain CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 SMART SM00471 20 148 1.6E-4 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 SMART SM00471 227 344 63.0 T 28-03-2018 IPR003607 HD/PDEase domain CI104_RS22820 86ccd3d99673b31d57069019166f8900 394 Gene3D G3DSA:1.10.3210.10 205 286 1.2E-6 T 28-03-2018 CI104_RS19030 a123769989d518b06e2aaa859a1aea54 82 Gene3D G3DSA:3.30.1320.10 1 79 7.4E-33 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19030 a123769989d518b06e2aaa859a1aea54 82 ProSitePatterns PS00732 Ribosomal protein S16 signature. 2 11 - T 28-03-2018 IPR020592 Ribosomal protein S16, conserved site GO:0003735|GO:0005622|GO:0005840|GO:0006412 CI104_RS19030 a123769989d518b06e2aaa859a1aea54 82 Pfam PF00886 Ribosomal protein S16 8 68 3.3E-24 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19030 a123769989d518b06e2aaa859a1aea54 82 TIGRFAM TIGR00002 S16: ribosomal protein bS16 2 78 2.4E-28 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19030 a123769989d518b06e2aaa859a1aea54 82 Hamap MF_00385 30S ribosomal protein S16 [rpsP]. 1 78 24.041 T 28-03-2018 IPR000307 Ribosomal protein S16 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS19030 a123769989d518b06e2aaa859a1aea54 82 SUPERFAMILY SSF54565 1 76 8.11E-29 T 28-03-2018 IPR023803 Ribosomal protein S16 domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS17155 98f9946046505f50726ce3184e0f4850 149 Gene3D G3DSA:1.10.1130.10 62 128 1.0E-29 T 28-03-2018 CI104_RS17155 98f9946046505f50726ce3184e0f4850 149 SUPERFAMILY SSF48695 48 145 6.93E-41 T 28-03-2018 IPR011031 Multihaem cytochrome CI104_RS17155 98f9946046505f50726ce3184e0f4850 149 PIRSF PIRSF006105 3 149 1.8E-54 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CI104_RS17155 98f9946046505f50726ce3184e0f4850 149 Pfam PF03892 Nitrate reductase cytochrome c-type subunit (NapB) 39 142 2.7E-44 T 28-03-2018 IPR005591 Nitrate reductase cytochrome c-type subunit NapB CI104_RS25880 c58976944e83c65f11403a0012f63357 412 Pfam PF01548 Transposase 11 165 1.6E-32 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS25880 c58976944e83c65f11403a0012f63357 412 Pfam PF02371 Transposase IS116/IS110/IS902 family 275 359 3.4E-16 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CI104_RS02735 32b423dc7cf1060758a72a401d87d899 260 Pfam PF02405 Permease MlaE 44 256 1.1E-72 T 28-03-2018 IPR030802 ABC transporter permease MalE GO:0006810|GO:0043190 CI104_RS02735 32b423dc7cf1060758a72a401d87d899 260 TIGRFAM TIGR00056 TIGR00056: ABC transport permease subunit 5 258 2.8E-106 T 28-03-2018 IPR003453 ABC transport permease subunit MlaE, Proteobacteria CI104_RS23180 e167387b2de384f9a595011500278c23 223 TIGRFAM TIGR03149 cyt_nit_nrfC: cytochrome c nitrite reductase, Fe-S protein 2 222 8.2E-124 T 28-03-2018 IPR017567 Cytochrome c nitrite reductase, Fe-S protein CI104_RS23180 e167387b2de384f9a595011500278c23 223 Gene3D G3DSA:3.30.70.20 108 144 8.1E-19 T 28-03-2018 CI104_RS23180 e167387b2de384f9a595011500278c23 223 Pfam PF00037 4Fe-4S binding domain 40 56 1.7E-4 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS23180 e167387b2de384f9a595011500278c23 223 SUPERFAMILY SSF54862 36 215 3.45E-64 T 28-03-2018 CI104_RS23180 e167387b2de384f9a595011500278c23 223 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 125 136 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS23180 e167387b2de384f9a595011500278c23 223 Gene3D G3DSA:3.30.70.20 145 218 3.3E-23 T 28-03-2018 CI104_RS23180 e167387b2de384f9a595011500278c23 223 Pfam PF13247 4Fe-4S dicluster domain 84 181 1.0E-24 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS23180 e167387b2de384f9a595011500278c23 223 Gene3D G3DSA:3.30.70.20 19 48 2.6E-4 T 28-03-2018 CI104_RS23180 e167387b2de384f9a595011500278c23 223 Gene3D G3DSA:3.30.70.20 49 107 5.9E-17 T 28-03-2018 CI104_RS12840 5fbd8e18916e4e25ee57b07302178372 525 Gene3D G3DSA:1.25.10.20 100 169 0.21 T 28-03-2018 CI104_RS12840 5fbd8e18916e4e25ee57b07302178372 525 SUPERFAMILY SSF48371 115 228 1.82E-8 T 28-03-2018 IPR016024 Armadillo-type fold GO:0005488 CI104_RS12840 5fbd8e18916e4e25ee57b07302178372 525 Pfam PF02653 Branched-chain amino acid transport system / permease component 232 507 4.0E-50 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS12840 5fbd8e18916e4e25ee57b07302178372 525 TIGRFAM TIGR03409 urea_trans_UrtB: urea ABC transporter, permease protein UrtB 230 521 1.4E-127 T 28-03-2018 IPR017779 ABC transporter, urea permease protein UrtB, bacterial-type CI104_RS12840 5fbd8e18916e4e25ee57b07302178372 525 Gene3D G3DSA:1.10.3470.10 189 511 4.5E-51 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS20755 ad839fc93bb4e2f6bae576bb75a3b5f6 347 TIGRFAM TIGR00787 dctP: TRAP transporter solute receptor, DctP family 51 300 1.5E-58 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CI104_RS20755 ad839fc93bb4e2f6bae576bb75a3b5f6 347 Pfam PF03480 Bacterial extracellular solute-binding protein, family 7 67 324 5.2E-70 T 28-03-2018 IPR018389 TRAP transporter solute receptor DctP/TeaA GO:0006810|GO:0030288 CI104_RS20755 ad839fc93bb4e2f6bae576bb75a3b5f6 347 PIRSF PIRSF006470 8 340 1.1E-77 T 28-03-2018 IPR004682 TRAP transporter solute receptor, DctP family GO:0006810|GO:0030288 CI104_RS07245 44a63d4ecaae7aebe19b3a961d401e1a 311 SUPERFAMILY SSF53822 25 304 3.03E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS07245 44a63d4ecaae7aebe19b3a961d401e1a 311 Gene3D G3DSA:3.40.50.2300 19 141 1.3E-25 T 28-03-2018 CI104_RS07245 44a63d4ecaae7aebe19b3a961d401e1a 311 Gene3D G3DSA:3.40.50.2300 142 306 4.8E-30 T 28-03-2018 CI104_RS07245 44a63d4ecaae7aebe19b3a961d401e1a 311 Pfam PF13407 Periplasmic binding protein domain 29 279 4.7E-51 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS08130 894ff9563baa82759885c398c0352b58 239 Pfam PF04973 Nicotinamide mononucleotide transporter 23 226 2.2E-50 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CI104_RS08130 894ff9563baa82759885c398c0352b58 239 TIGRFAM TIGR01528 NMN_trans_PnuC: nicotinamide mononucleotide transporter PnuC 22 231 3.0E-72 T 28-03-2018 IPR006419 Nicotinamide mononucleotide transporter PnuC GO:0016020|GO:0034257|GO:0034258 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 Gene3D G3DSA:3.30.420.40 3 249 3.7E-70 T 28-03-2018 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 SUPERFAMILY SSF53067 260 499 6.31E-59 T 28-03-2018 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 Gene3D G3DSA:3.30.420.40 250 500 2.8E-56 T 28-03-2018 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 ProSitePatterns PS00445 FGGY family of carbohydrate kinases signature 2. 367 387 - T 28-03-2018 IPR018483 Carbohydrate kinase, FGGY, conserved site GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 SUPERFAMILY SSF53067 8 253 1.38E-76 T 28-03-2018 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 PIRSF PIRSF000538 6 503 2.2E-127 T 28-03-2018 IPR000577 Carbohydrate kinase, FGGY GO:0005975|GO:0016773 KEGG: 00561+2.7.1.30|MetaCyc: PWY-4261 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 Pfam PF00370 FGGY family of carbohydrate kinases, N-terminal domain 9 253 2.1E-64 T 28-03-2018 IPR018484 Carbohydrate kinase, FGGY, N-terminal GO:0005975|GO:0016773 CI104_RS07250 c0618396223b6a54c1113cbdbb6d691a 506 Pfam PF02782 FGGY family of carbohydrate kinases, C-terminal domain 263 454 3.7E-43 T 28-03-2018 IPR018485 Carbohydrate kinase, FGGY, C-terminal GO:0005975|GO:0016773 CI104_RS07845 8237aef9903df200ae31a6aa4cddeabf 244 Hamap MF_00691 UPF0271 protein YbgL [ybgL]. 1 240 43.152 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CI104_RS07845 8237aef9903df200ae31a6aa4cddeabf 244 SUPERFAMILY SSF88713 1 243 8.15E-91 T 28-03-2018 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel GO:0003824|GO:0005975 CI104_RS07845 8237aef9903df200ae31a6aa4cddeabf 244 Pfam PF03746 LamB/YcsF family 3 235 1.3E-92 T 28-03-2018 IPR005501 Uncharacterised protein family UPF0271, LamB/YcsF CI104_RS07845 8237aef9903df200ae31a6aa4cddeabf 244 Gene3D G3DSA:3.20.20.370 2 244 2.6E-97 T 28-03-2018 CI104_RS05205 acafc98fe20df52b3eadce0f3aa0ca73 265 Pfam PF00005 ABC transporter 27 176 3.1E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS05205 acafc98fe20df52b3eadce0f3aa0ca73 265 SUPERFAMILY SSF52540 13 239 1.09E-62 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS05205 acafc98fe20df52b3eadce0f3aa0ca73 265 Gene3D G3DSA:3.40.50.300 1 245 6.7E-62 T 28-03-2018 CI104_RS05205 acafc98fe20df52b3eadce0f3aa0ca73 265 SMART SM00382 36 224 3.3E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS05205 acafc98fe20df52b3eadce0f3aa0ca73 265 ProSitePatterns PS00211 ABC transporters family signature. 148 162 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS08750 861aec78b4eb2e4da67349609786b4f4 238 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 6 81 6.1E-12 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS08750 861aec78b4eb2e4da67349609786b4f4 238 SUPERFAMILY SSF161098 8 216 4.32E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08750 861aec78b4eb2e4da67349609786b4f4 238 Gene3D G3DSA:1.10.3720.10 2 236 2.6E-35 T 28-03-2018 CI104_RS08750 861aec78b4eb2e4da67349609786b4f4 238 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 26 230 9.7E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS03585 e0299642d226b4ae1c442e5153178d84 405 Pfam PF12571 Phage tail-collar fibre protein 1 150 1.7E-62 T 28-03-2018 IPR022225 Phage tail fibre protein CI104_RS25290 7a2b29eab3e2078732be6f26e080b42f 291 Gene3D G3DSA:1.10.10.10 88 191 2.4E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS25290 7a2b29eab3e2078732be6f26e080b42f 291 Pfam PF01051 Initiator Replication protein 23 275 5.2E-19 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CI104_RS13370 c23f65788d28c68a1ac8b5cd005bd57f 716 PIRSF PIRSF034586 409 716 2.2E-75 T 28-03-2018 IPR017030 Virulence effector, SrfC CI104_RS13370 c23f65788d28c68a1ac8b5cd005bd57f 716 PIRSF PIRSF034586 1 414 1.6E-132 T 28-03-2018 IPR017030 Virulence effector, SrfC CI104_RS13370 c23f65788d28c68a1ac8b5cd005bd57f 716 Pfam PF10139 Putative bacterial virulence factor 548 712 2.7E-24 T 28-03-2018 IPR017030 Virulence effector, SrfC CI104_RS13370 c23f65788d28c68a1ac8b5cd005bd57f 716 Pfam PF10139 Putative bacterial virulence factor 11 415 8.0E-65 T 28-03-2018 IPR017030 Virulence effector, SrfC CI104_RS03495 0fa1f7d352b24b1cdce40b801755230a 344 Pfam PF04860 Phage portal protein 97 326 4.4E-14 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CI104_RS03495 0fa1f7d352b24b1cdce40b801755230a 344 PIRSF PIRSF018494 1 344 1.5E-155 T 28-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria CI104_RS03495 0fa1f7d352b24b1cdce40b801755230a 344 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 54 333 1.2E-103 T 28-03-2018 IPR006430 Phage portal protein PBSX family CI104_RS28070 84e61ac1a65932caf503ebfd9913513a 223 Pfam PF10784 Plasmid stability protein 5 74 1.0E-25 T 28-03-2018 IPR019720 Plasmid stability protein, StbB CI104_RS28070 84e61ac1a65932caf503ebfd9913513a 223 Pfam PF10784 Plasmid stability protein 109 178 1.6E-21 T 28-03-2018 IPR019720 Plasmid stability protein, StbB CI104_RS10050 f2e192c99870dc4f04d054521947d4cf 371 Pfam PF01594 AI-2E family transporter 11 339 6.1E-53 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CI104_RS16110 439a822b5d3eea9536469b949b341fc6 245 Hamap MF_01462 Cobalt transport protein CbiM [cbiM]. 31 244 27.419 T 28-03-2018 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CI104_RS16110 439a822b5d3eea9536469b949b341fc6 245 TIGRFAM TIGR00123 cbiM: cobalamin biosynthesis protein CbiM 31 241 5.2E-112 T 28-03-2018 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM GO:0006824|GO:0009236|GO:0016021|GO:0043190 CI104_RS16110 439a822b5d3eea9536469b949b341fc6 245 Pfam PF01891 Cobalt uptake substrate-specific transmembrane region 32 237 1.5E-52 T 28-03-2018 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family GO:0000041|GO:0016021 CI104_RS15545 9dc265dac75f75039bbd94b795852188 309 SUPERFAMILY SSF103088 157 265 3.4E-19 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS15545 9dc265dac75f75039bbd94b795852188 309 Pfam PF13677 Membrane MotB of proton-channel complex MotA/MotB 13 66 1.4E-20 T 28-03-2018 IPR025713 Motility protein B, N-terminal domain CI104_RS15545 9dc265dac75f75039bbd94b795852188 309 Pfam PF00691 OmpA family 161 258 2.8E-13 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS15545 9dc265dac75f75039bbd94b795852188 309 Gene3D G3DSA:3.30.1330.60 108 296 2.7E-41 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS11380 826fc0af8bdcf28628573cdc536d76f2 60 Pfam PF14206 Cysteine-rich CPCC 6 59 3.7E-14 T 28-03-2018 IPR025983 Cysteine-rich CPCC domain CI104_RS11380 826fc0af8bdcf28628573cdc536d76f2 60 Gene3D G3DSA:3.90.820.10 3 60 1.5E-4 T 28-03-2018 CI104_RS11380 826fc0af8bdcf28628573cdc536d76f2 60 SUPERFAMILY SSF57783 4 44 9.35E-5 T 28-03-2018 CI104_RS03550 232466501827712479228227dd8249f9 143 Pfam PF06891 P2 phage tail completion protein R (GpR) 2 121 6.1E-43 T 28-03-2018 IPR009678 Bacteriophage tail completion protein R CI104_RS00225 d567daeba6863b05217e7f9802e46a1e 150 ProDom PD093913 YICN MEMBRANE INNER EXPORTED 1 145 5.0E-70 T 28-03-2018 IPR009587 Protein of unknown function DUF1198 CI104_RS00225 d567daeba6863b05217e7f9802e46a1e 150 Pfam PF06711 Protein of unknown function (DUF1198) 1 143 1.8E-66 T 28-03-2018 IPR009587 Protein of unknown function DUF1198 CI104_RS00225 d567daeba6863b05217e7f9802e46a1e 150 Gene3D G3DSA:3.40.50.1220 5 133 3.5E-4 T 28-03-2018 IPR029035 DHS-like NAD/FAD-binding domain CI104_RS10700 6f89cc7125d931e3c6247b6d0f75f45b 136 SUPERFAMILY SSF47413 1 67 9.01E-13 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS10700 6f89cc7125d931e3c6247b6d0f75f45b 136 Gene3D G3DSA:1.10.260.40 1 135 3.5E-16 T 28-03-2018 CI104_RS10700 6f89cc7125d931e3c6247b6d0f75f45b 136 SMART SM00530 6 61 5.6E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS10700 6f89cc7125d931e3c6247b6d0f75f45b 136 Pfam PF01381 Helix-turn-helix 7 61 5.8E-11 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS18630 1b0cf4e056c1483c8e31caad60a7fe44 243 PIRSF PIRSF004808 1 243 4.8E-80 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS18630 1b0cf4e056c1483c8e31caad60a7fe44 243 Gene3D G3DSA:3.40.1280.10 1 165 2.2E-44 T 28-03-2018 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CI104_RS18630 1b0cf4e056c1483c8e31caad60a7fe44 243 Pfam PF00588 SpoU rRNA Methylase family 5 154 2.4E-33 T 28-03-2018 IPR001537 tRNA/rRNA methyltransferase, SpoU type GO:0003723|GO:0006396|GO:0008173 CI104_RS18630 1b0cf4e056c1483c8e31caad60a7fe44 243 SUPERFAMILY SSF75217 4 164 2.09E-39 T 28-03-2018 IPR029028 Alpha/beta knot methyltransferases CI104_RS18630 1b0cf4e056c1483c8e31caad60a7fe44 243 TIGRFAM TIGR00050 rRNA_methyl_1: RNA methyltransferase, TrmH family, group 1 1 241 8.0E-95 T 28-03-2018 IPR004384 RNA methyltransferase TrmH, group 1 GO:0006396|GO:0008173 KEGG: 00260+2.1.1.20|MetaCyc: PWY-6004 CI104_RS12950 005edae3ebf936c8013399daf2a391b3 252 Hamap MF_00560 Trans-aconitate 2-methyltransferase [tam]. 2 251 44.825 T 28-03-2018 IPR023506 Trans-aconitate 2-methyltransferase GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS12950 005edae3ebf936c8013399daf2a391b3 252 SUPERFAMILY SSF53335 16 237 8.21E-35 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS12950 005edae3ebf936c8013399daf2a391b3 252 Gene3D G3DSA:1.10.150.290 168 230 5.0E-29 T 28-03-2018 IPR023149 Trans-aconitate 2-methyltransferase, C-terminal GO:0030798 KEGG: 00270+2.1.1.14|KEGG: 00450+2.1.1.14|MetaCyc: PWY-5041|MetaCyc: PWY-6151|MetaCyc: PWY-6936|MetaCyc: PWY-702 CI104_RS12950 005edae3ebf936c8013399daf2a391b3 252 Pfam PF13489 Methyltransferase domain 15 176 1.4E-15 T 28-03-2018 CI104_RS12950 005edae3ebf936c8013399daf2a391b3 252 Gene3D G3DSA:3.40.50.150 2 167 8.9E-25 T 28-03-2018 CI104_RS21095 e73b52c676a079ed57e9c9ae19404337 194 Pfam PF03695 Uncharacterised protein family (UPF0149) 14 179 1.0E-39 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS21095 e73b52c676a079ed57e9c9ae19404337 194 SUPERFAMILY SSF101327 9 178 1.01E-53 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS21095 e73b52c676a079ed57e9c9ae19404337 194 Hamap MF_00346 UPF0149 protein YgfB [ygfB]. 8 192 37.772 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS21095 e73b52c676a079ed57e9c9ae19404337 194 TIGRFAM TIGR02292 ygfB_yecA: yecA family protein 14 168 2.1E-13 T 28-03-2018 IPR011978 Uncharacterised protein family UPF0149 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 Gene3D G3DSA:1.10.10.10 1 92 1.6E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 30 40 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 19 30 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 40 51 2.7E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 63 2.0E-12 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 Gene3D G3DSA:3.40.190.10 93 180 3.3E-20 T 28-03-2018 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 SUPERFAMILY SSF46785 11 112 2.79E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 Pfam PF03466 LysR substrate binding domain 90 293 3.1E-42 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 Gene3D G3DSA:3.40.190.10 181 267 4.2E-19 T 28-03-2018 CI104_RS15995 a778850b1cb2b6828c5c52e9607cdc16 316 SUPERFAMILY SSF53850 88 294 1.18E-41 T 28-03-2018 CI104_RS08745 589e4c533af4ed8e5d22baac3a6a8f97 222 TIGRFAM TIGR01726 HEQRo_perm_3TM: amino ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 5 110 1.3E-17 T 28-03-2018 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain GO:0005215|GO:0006810|GO:0016021 CI104_RS08745 589e4c533af4ed8e5d22baac3a6a8f97 222 SUPERFAMILY SSF161098 6 200 3.01E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08745 589e4c533af4ed8e5d22baac3a6a8f97 222 Gene3D G3DSA:1.10.3720.10 1 221 4.5E-28 T 28-03-2018 CI104_RS08745 589e4c533af4ed8e5d22baac3a6a8f97 222 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 34 214 7.8E-11 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 Pfam PF00145 C-5 cytosine-specific DNA methylase 549 606 6.3E-6 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 Pfam PF00145 C-5 cytosine-specific DNA methylase 5 121 1.3E-6 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 Gene3D G3DSA:3.40.50.150 4 234 6.0E-39 T 28-03-2018 CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 SUPERFAMILY SSF53335 182 262 1.22E-63 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 SUPERFAMILY SSF53335 4 150 1.22E-63 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 SUPERFAMILY SSF53335 296 362 1.22E-63 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 SUPERFAMILY SSF53335 550 606 1.22E-63 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS11075 7ffac46ecd08116c2a05b187815c5ecd 621 Gene3D G3DSA:3.90.120.10 290 596 7.5E-7 T 28-03-2018 CI104_RS21420 d4feed3292c1a4b55f72199ddc04a354 353 Pfam PF11168 Protein of unknown function (DUF2955) 25 163 9.3E-42 T 28-03-2018 IPR022604 Protein of unknown function DUF2955 CI104_RS21420 d4feed3292c1a4b55f72199ddc04a354 353 PIRSF PIRSF029594 18 353 4.2E-102 T 28-03-2018 IPR016926 Uncharacterised conserved protein UCP029594 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 240 255 2.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 PRINTS PR00032 AraC bacterial regulatory protein HTH signature 255 271 2.7E-6 T 28-03-2018 IPR020449 Transcription regulator HTH, AraC- type GO:0003700|GO:0006355 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 Gene3D G3DSA:1.10.10.60 207 228 0.003 T 28-03-2018 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 Pfam PF07883 Cupin domain 28 80 3.4E-8 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 SUPERFAMILY SSF46689 224 275 7.17E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 Gene3D G3DSA:2.60.120.10 8 206 3.6E-13 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 Pfam PF12833 Helix-turn-helix domain 201 272 1.5E-18 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 ProSitePatterns PS00041 Bacterial regulatory proteins, araC family signature. 225 267 - T 28-03-2018 IPR018062 HTH domain AraC-type, conserved site GO:0003700|GO:0006355|GO:0043565 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 Gene3D G3DSA:1.10.10.60 229 279 2.5E-12 T 28-03-2018 CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 SUPERFAMILY SSF51182 29 160 2.67E-16 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS11850 9d85421733bc488c75bfa6a9bcbf5656 279 SMART SM00342 188 271 5.1E-23 T 28-03-2018 IPR018060 DNA binding HTH domain, AraC-type GO:0003700|GO:0006355|GO:0043565 CI104_RS28310 c6be4034991161b26c254a897661b1de 246 Pfam PF06586 TraK protein 16 236 1.2E-53 T 28-03-2018 IPR010563 Pilus assembly TraK CI104_RS28310 c6be4034991161b26c254a897661b1de 246 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 15 237 5.3E-61 T 28-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK CI104_RS15905 fc8f1bbd0786313262a589b689b08410 264 TIGRFAM TIGR01400 fliR: flagellar biosynthetic protein FliR 14 254 5.7E-81 T 28-03-2018 IPR006303 Flagellar biosynthesis protein FliR GO:0016021|GO:0044780 CI104_RS15905 fc8f1bbd0786313262a589b689b08410 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 22 43 1.6E-33 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CI104_RS15905 fc8f1bbd0786313262a589b689b08410 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 202 221 1.6E-33 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CI104_RS15905 fc8f1bbd0786313262a589b689b08410 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 80 99 1.6E-33 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CI104_RS15905 fc8f1bbd0786313262a589b689b08410 264 PRINTS PR00953 Type III secretion system inner membrane R protein family signature 180 202 1.6E-33 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CI104_RS15905 fc8f1bbd0786313262a589b689b08410 264 Pfam PF01311 Bacterial export proteins, family 1 14 246 9.9E-69 T 28-03-2018 IPR002010 Type III secretion system inner membrane R protein GO:0006605|GO:0016020 CI104_RS05945 938a5323cf21e614a3413f9807c84e6a 692 SUPERFAMILY SSF161098 141 405 1.96E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS05945 938a5323cf21e614a3413f9807c84e6a 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 210 402 4.9E-16 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS05945 938a5323cf21e614a3413f9807c84e6a 692 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 501 677 9.0E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS05945 938a5323cf21e614a3413f9807c84e6a 692 SUPERFAMILY SSF161098 434 674 1.96E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS05945 938a5323cf21e614a3413f9807c84e6a 692 Gene3D G3DSA:1.10.3720.10 140 406 8.6E-34 T 28-03-2018 CI104_RS05945 938a5323cf21e614a3413f9807c84e6a 692 Gene3D G3DSA:1.10.3720.10 425 686 2.2E-34 T 28-03-2018 CI104_RS19380 2678fe049e24397c87a6df63b584f79c 190 SUPERFAMILY SSF53474 13 177 9.45E-32 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS19380 2678fe049e24397c87a6df63b584f79c 190 Gene3D G3DSA:3.40.50.1820 3 185 2.2E-14 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS19380 2678fe049e24397c87a6df63b584f79c 190 Pfam PF06821 Serine hydrolase 15 176 2.4E-49 T 28-03-2018 IPR010662 Putative hydrolase RBBP9/YdeN GO:0016787 CI104_RS21610 c75c624f335187101a01c28e6847848e 323 Pfam PF06996 Type VI secretion, TssG 19 283 9.6E-41 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CI104_RS02415 171cd255a54589bb0468f8e7e7c2ccbf 348 Gene3D G3DSA:2.70.98.10 74 331 1.4E-15 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS02415 171cd255a54589bb0468f8e7e7c2ccbf 348 Pfam PF14486 Domain of unknown function (DUF4432) 29 330 9.6E-105 T 28-03-2018 IPR027839 Protein of unknown function DUF4432 CI104_RS01755 cba38d8d9754fdc257a6d5547ff8f8ea 186 ProSitePatterns PS00893 Nudix box signature. 80 101 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS01755 cba38d8d9754fdc257a6d5547ff8f8ea 186 SUPERFAMILY SSF55811 3 182 1.49E-38 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS01755 cba38d8d9754fdc257a6d5547ff8f8ea 186 Pfam PF00293 NUDIX domain 47 150 3.4E-12 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS01755 cba38d8d9754fdc257a6d5547ff8f8ea 186 Gene3D G3DSA:3.90.79.10 8 186 1.0E-33 T 28-03-2018 CI104_RS06265 b66a43194500bfa0c49a53da8853be37 149 TIGRFAM TIGR00244 TIGR00244: transcriptional regulator NrdR 1 147 7.1E-78 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CI104_RS06265 b66a43194500bfa0c49a53da8853be37 149 Pfam PF03477 ATP cone domain 50 136 1.0E-15 T 28-03-2018 IPR005144 ATP-cone domain Reactome: R-HSA-499943 CI104_RS06265 b66a43194500bfa0c49a53da8853be37 149 Hamap MF_00440 Transcriptional repressor NrdR [nrdR]. 1 149 89.187 T 28-03-2018 IPR003796 Ribonucleotide reductase regulator NrdR-like GO:0008270|GO:0045892 CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 Pfam PF05958 tRNA (Uracil-5-)-methyltransferase 10 365 1.8E-191 T 28-03-2018 IPR010280 (Uracil-5)-methyltransferase family GO:0006396|GO:0008173 CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 ProSitePatterns PS01231 RNA methyltransferase trmA family signature 2. 348 358 - T 28-03-2018 IPR030391 RNA methyltransferase TrmA, conserved site CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 SUPERFAMILY SSF53335 6 363 4.48E-53 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 Gene3D G3DSA:3.40.50.150 155 366 2.0E-34 T 28-03-2018 CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 Hamap MF_01011 tRNA/tmRNA (uracil-C(5))-methyltransferase [trmA]. 4 366 42.667 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 ProSitePatterns PS01230 RNA methyltransferase trmA family signature 1. 299 328 - T 28-03-2018 IPR030390 RNA methyltransferase TrmA, active site CI104_RS23890 2f1ab81a549d091fd129b8554beaaa3b 366 TIGRFAM TIGR02143 trmA_only: tRNA (uracil(54)-C(5))-methyltransferase 10 365 4.0E-187 T 28-03-2018 IPR011869 tRNA/tmRNA (uracil-C(5))-methyltransferase, TrmA GO:0006396|GO:0030697 CI104_RS15380 eb5989498435fa205526865c49472c10 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 3 20 1.7E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CI104_RS15380 eb5989498435fa205526865c49472c10 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 126 139 1.7E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CI104_RS15380 eb5989498435fa205526865c49472c10 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 71 90 1.7E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CI104_RS15380 eb5989498435fa205526865c49472c10 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 20 41 1.7E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CI104_RS15380 eb5989498435fa205526865c49472c10 147 PRINTS PR01404 DATP pyrophosphohydrolase signature 99 120 1.7E-51 T 28-03-2018 IPR003564 Dihydroneopterin triphosphate diphosphatase GO:0008828|GO:0019177|GO:0046656 KEGG: 00790+3.6.1.67|MetaCyc: PWY-6147 CI104_RS15380 eb5989498435fa205526865c49472c10 147 Pfam PF00293 NUDIX domain 4 140 2.9E-17 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS15380 eb5989498435fa205526865c49472c10 147 Gene3D G3DSA:3.90.79.10 1 147 1.2E-27 T 28-03-2018 CI104_RS15380 eb5989498435fa205526865c49472c10 147 SUPERFAMILY SSF55811 3 140 2.3E-22 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS10810 399d30052012c263dcc72680d347ac12 104 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 8 84 3.3E-20 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CI104_RS09825 f3ef92f3c9e496ef8e015e3486310806 172 Gene3D G3DSA:3.90.960.10 1 164 4.0E-33 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS09825 f3ef92f3c9e496ef8e015e3486310806 172 Pfam PF04073 Aminoacyl-tRNA editing domain 22 148 3.4E-26 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS09825 f3ef92f3c9e496ef8e015e3486310806 172 SUPERFAMILY SSF55826 4 156 4.32E-37 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS21675 7ddae5204b532a875a10ee8f972ed1f2 116 SUPERFAMILY SSF51182 27 106 2.97E-22 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS21675 7ddae5204b532a875a10ee8f972ed1f2 116 Gene3D G3DSA:2.60.120.10 3 114 3.3E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS21675 7ddae5204b532a875a10ee8f972ed1f2 116 Pfam PF07883 Cupin domain 30 97 1.2E-17 T 28-03-2018 IPR013096 Cupin 2, conserved barrel CI104_RS00540 f5a278ce131c1f1313ef04e328425d1d 425 Pfam PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) 33 211 1.4E-66 T 28-03-2018 IPR007507 3-deoxy-D-manno-octulosonic-acid transferase, N-terminal KEGG: 00540+2.4.99.12|MetaCyc: PWY-7675 CI104_RS00540 f5a278ce131c1f1313ef04e328425d1d 425 Pfam PF00534 Glycosyl transferases group 1 234 398 5.8E-13 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS00540 f5a278ce131c1f1313ef04e328425d1d 425 SUPERFAMILY SSF53756 57 420 1.03E-20 T 28-03-2018 CI104_RS00540 f5a278ce131c1f1313ef04e328425d1d 425 Gene3D G3DSA:3.40.50.2000 50 203 2.2E-4 T 28-03-2018 CI104_RS00540 f5a278ce131c1f1313ef04e328425d1d 425 Gene3D G3DSA:3.40.50.2000 210 402 6.0E-15 T 28-03-2018 CI104_RS11350 8695ea5ff261a0e0cae938b344c2c0d0 272 Pfam PF11236 Protein of unknown function (DUF3037) 7 125 1.1E-25 T 28-03-2018 IPR021398 Protein of unknown function DUF3037 CI104_RS05955 06bce151fb9bfe10fd3e4ab0c1dae3d0 434 SUPERFAMILY SSF103473 10 419 3.53E-71 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS05955 06bce151fb9bfe10fd3e4ab0c1dae3d0 434 Pfam PF07690 Major Facilitator Superfamily 25 385 1.4E-44 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS05955 06bce151fb9bfe10fd3e4ab0c1dae3d0 434 PIRSF PIRSF002808 3 433 4.4E-120 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS05955 06bce151fb9bfe10fd3e4ab0c1dae3d0 434 Gene3D G3DSA:1.20.1250.20 228 431 9.1E-24 T 28-03-2018 CI104_RS05955 06bce151fb9bfe10fd3e4ab0c1dae3d0 434 Gene3D G3DSA:1.20.1250.20 8 205 1.6E-32 T 28-03-2018 CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 Pfam PF01047 MarR family 36 94 1.1E-10 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 71 86 3.5E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 90 106 3.5E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 PRINTS PR00598 Bacterial regulatory protein MarR family signature 54 70 3.5E-7 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 SUPERFAMILY SSF46785 10 148 1.7E-28 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 Gene3D G3DSA:1.10.10.10 8 154 6.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21430 4d7303a0d43c6099bda0b918ebe00e9c 154 SMART SM00347 29 130 2.9E-17 T 28-03-2018 IPR000835 MarR-type HTH domain GO:0003700|GO:0006355 CI104_RS01950 7006507c173b92b160336c67029c8ca8 184 Hamap MF_01415 Glutathione-regulated potassium-efflux system ancillary protein KefG [kefG]. 2 183 48.399 T 28-03-2018 IPR023947 Glutathione-regulated potassium-efflux system ancillary protein KefG GO:0006813 KEGG: 00130+1.6.5.2|MetaCyc: PWY-7731 CI104_RS01950 7006507c173b92b160336c67029c8ca8 184 Gene3D G3DSA:3.40.50.360 1 180 3.0E-32 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS01950 7006507c173b92b160336c67029c8ca8 184 SUPERFAMILY SSF52218 6 176 1.07E-46 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS01950 7006507c173b92b160336c67029c8ca8 184 Pfam PF02525 Flavodoxin-like fold 7 172 3.9E-40 T 28-03-2018 IPR003680 Flavodoxin-like fold CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 Gene3D G3DSA:3.40.50.300 327 581 2.0E-66 T 28-03-2018 CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 SUPERFAMILY SSF52540 335 576 1.87E-77 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 SUPERFAMILY SSF90123 12 325 2.35E-69 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 ProSitePatterns PS00211 ABC transporters family signature. 477 491 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 Gene3D G3DSA:1.20.1560.10 6 326 1.1E-61 T 28-03-2018 CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 Pfam PF00005 ABC transporter 357 505 2.8E-30 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 SMART SM00382 366 557 1.3E-14 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS06485 924e639a26e23d1dca89e777cd95f5f5 592 Pfam PF00664 ABC transporter transmembrane region 26 295 1.1E-42 T 28-03-2018 IPR011527 ABC transporter type 1, transmembrane domain GO:0005524|GO:0006810|GO:0016021|GO:0042626|GO:0055085 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 SUPERFAMILY SSF54909 62 151 7.51E-21 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 Pfam PF13404 AsnC-type helix-turn-helix domain 2 43 1.4E-15 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 Gene3D G3DSA:1.10.10.10 3 54 1.8E-10 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 SUPERFAMILY SSF46785 1 61 3.15E-15 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 ProSitePatterns PS00519 AsnC-type HTH domain signature. 20 46 - T 28-03-2018 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 SMART SM00344 2 111 9.0E-37 T 28-03-2018 IPR019888 Transcription regulator AsnC-type GO:0003700|GO:0005622|GO:0006355|GO:0043565 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 2 18 5.4E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 18 29 5.4E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 PRINTS PR00033 AsnC bacterial regulatory protein HTH signature 29 48 5.4E-10 T 28-03-2018 IPR000485 AsnC-type HTH domain GO:0043565 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 Gene3D G3DSA:3.30.70.920 55 148 2.3E-27 T 28-03-2018 CI104_RS06475 f5e9eb88cb4d7a7958de572bb53fa47a 152 Pfam PF01037 Lrp/AsnC ligand binding domain 68 142 1.1E-21 T 28-03-2018 IPR019887 Transcription regulator AsnC/Lrp, ligand binding domain CI104_RS01970 51c2b2d2083aa392b5ed8735e396e74f 72 Gene3D G3DSA:1.20.5.300 4 50 1.6E-16 T 28-03-2018 CI104_RS01970 51c2b2d2083aa392b5ed8735e396e74f 72 Hamap MF_00715 Protein SlyX [slyX]. 5 72 17.23 T 28-03-2018 IPR007236 SlyX CI104_RS01970 51c2b2d2083aa392b5ed8735e396e74f 72 Pfam PF04102 SlyX 6 72 3.9E-24 T 28-03-2018 IPR007236 SlyX CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 10 68 1.2E-15 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 Gene3D G3DSA:1.10.10.10 3 90 9.5E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 SUPERFAMILY SSF46785 9 93 1.56E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 25 36 6.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 36 46 6.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 46 57 6.0E-8 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 Gene3D G3DSA:3.40.190.10 190 272 9.2E-18 T 28-03-2018 CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 Gene3D G3DSA:3.40.190.10 99 189 5.7E-15 T 28-03-2018 CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 Pfam PF03466 LysR substrate binding domain 95 301 1.2E-32 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS16830 87a683313506e4b6e03b4bf70c1cdde3 302 SUPERFAMILY SSF53850 96 301 2.44E-33 T 28-03-2018 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 SUPERFAMILY SSF55874 320 470 7.99E-31 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 SUPERFAMILY SSF47384 236 313 2.35E-15 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 415 425 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 456 469 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 397 411 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 PRINTS PR00344 Bacterial sensor protein C-terminal signature 432 450 1.6E-9 T 28-03-2018 IPR004358 Signal transduction histidine kinase-related protein, C-terminal GO:0016310|GO:0016772 Reactome: R-HSA-70895 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 Gene3D G3DSA:1.10.287.130 239 313 1.4E-13 T 28-03-2018 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 SMART SM00388 249 317 4.2E-17 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 Pfam PF00512 His Kinase A (phospho-acceptor) domain 250 313 1.2E-13 T 28-03-2018 IPR003661 Signal transduction histidine kinase, dimerisation/phosphoacceptor domain GO:0000155|GO:0007165 CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 Pfam PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 363 471 9.7E-17 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 Gene3D G3DSA:3.30.565.10 320 476 2.1E-30 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS18745 3f162f0f71bee6fbb8c5fcd156934e31 476 SMART SM00387 360 472 2.1E-27 T 28-03-2018 IPR003594 Histidine kinase-like ATPase, C-terminal domain CI104_RS10590 ac55309be26e45f0178e046a8833186f 124 Pfam PF07233 Protein of unknown function (DUF1425) 33 123 3.9E-27 T 28-03-2018 IPR010824 Protein of unknown function DUF1425 CI104_RS22150 2bf589c0085bc211ada6c4617ace35a5 246 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 8 242 2.6E-125 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS22150 2bf589c0085bc211ada6c4617ace35a5 246 SUPERFAMILY SSF51569 53 205 9.03E-8 T 28-03-2018 CI104_RS22150 2bf589c0085bc211ada6c4617ace35a5 246 Gene3D G3DSA:3.20.20.70 4 245 4.0E-120 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS22150 2bf589c0085bc211ada6c4617ace35a5 246 Pfam PF07071 KDGP aldolase 8 224 1.5E-112 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 TIGRFAM TIGR00524 eIF-2B_rel: eIF-2B alpha/beta/delta-related uncharacterized proteins 41 347 5.0E-89 T 28-03-2018 IPR011559 Initiation factor 2B alpha/beta/delta GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 TIGRFAM TIGR00512 salvage_mtnA: S-methyl-5-thioribose-1-phosphate isomerase 17 348 8.4E-124 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 Hamap MF_01678 Putative methylthioribose-1-phosphate isomerase [mtnA]. 7 358 33.74 T 28-03-2018 IPR005251 Methylthioribose-1-phosphate isomerase GO:0044249 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174|Reactome: R-HSA-1237112 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 Gene3D G3DSA:3.40.50.10470 143 365 2.4E-59 T 28-03-2018 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 SUPERFAMILY SSF100950 1 350 6.14E-110 T 28-03-2018 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 Gene3D G3DSA:1.20.120.420 9 142 4.0E-40 T 28-03-2018 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CI104_RS04085 0d6fb9636955200863d7fbc474a5de1f 366 Pfam PF01008 Initiation factor 2 subunit family 52 347 1.2E-57 T 28-03-2018 IPR000649 Initiation factor 2B-related GO:0044237 KEGG: 00270+5.3.1.23|MetaCyc: PWY-4361|MetaCyc: PWY-7174 CI104_RS23545 9acdcd3544baba3fb1d27b5917f4c334 135 SUPERFAMILY SSF53062 1 125 2.35E-30 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS23545 9acdcd3544baba3fb1d27b5917f4c334 135 Gene3D G3DSA:3.40.50.510 1 134 2.4E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS23545 9acdcd3544baba3fb1d27b5917f4c334 135 TIGRFAM TIGR00824 EIIA-man: PTS system, mannose/fructose/sorbose family, IIA component 1 114 1.3E-44 T 28-03-2018 IPR013789 Phosphotransferase system, mannose family IIA component GO:0005737|GO:0008643|GO:0016773 CI104_RS23545 9acdcd3544baba3fb1d27b5917f4c334 135 Pfam PF03610 PTS system fructose IIA component 7 113 2.0E-17 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS15170 c8c4acf350e5dcca404893a079ed0344 47 Pfam PF10736 Protein of unknown function (DUF2627) 1 38 3.1E-28 T 28-03-2018 IPR019672 Protein of unknown function DUF2627 CI104_RS06340 6e53e81f4453dbe531a35600ee584922 196 Gene3D G3DSA:3.40.50.880 1 190 2.0E-38 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS06340 6e53e81f4453dbe531a35600ee584922 196 Pfam PF01965 DJ-1/PfpI family 4 170 3.3E-45 T 28-03-2018 IPR002818 DJ-1/PfpI CI104_RS06340 6e53e81f4453dbe531a35600ee584922 196 SUPERFAMILY SSF52317 5 188 7.98E-46 T 28-03-2018 IPR029062 Class I glutamine amidotransferase-like CI104_RS06340 6e53e81f4453dbe531a35600ee584922 196 TIGRFAM TIGR01383 not_thiJ: DJ-1 family protein 5 183 2.3E-61 T 28-03-2018 IPR006287 Protein DJ-1 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 Gene3D G3DSA:3.40.50.720 1 268 1.0E-62 T 28-03-2018 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 SUPERFAMILY SSF48179 273 482 2.96E-51 T 28-03-2018 IPR008927 6-phosphogluconate dehydrogenase C-terminal domain-like GO:0055114 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 Hamap MF_00670 Altronate oxidoreductase [uxaB]. 1 483 56.243 T 28-03-2018 IPR023668 Altronate oxidoreductase GO:0009026|GO:0055114 KEGG: 00040+1.1.1.58 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 Gene3D G3DSA:1.10.1040.10 272 483 1.7E-61 T 28-03-2018 IPR013328 6-phosphogluconate dehydrogenase, domain 2 GO:0016491|GO:0055114 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 Pfam PF01232 Mannitol dehydrogenase Rossmann domain 17 172 2.7E-39 T 28-03-2018 IPR013131 Mannitol dehydrogenase, N-terminal GO:0016491|GO:0055114 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 Pfam PF08125 Mannitol dehydrogenase C-terminal domain 205 458 1.9E-78 T 28-03-2018 IPR013118 Mannitol dehydrogenase, C-terminal GO:0016491|GO:0050662|GO:0055114 CI104_RS12930 f23f97faabced0836d0247dca69f94c0 483 SUPERFAMILY SSF51735 2 264 2.56E-66 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS10945 03ddf8d937f68be70faef96c7e83a731 263 SUPERFAMILY SSF161098 3 255 1.4E-55 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS10945 03ddf8d937f68be70faef96c7e83a731 263 Gene3D G3DSA:1.10.3720.10 5 260 4.2E-39 T 28-03-2018 CI104_RS10945 03ddf8d937f68be70faef96c7e83a731 263 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 75 252 3.8E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS19605 95bf58a0690fcdbdc5cfd7fc9c89844d 394 Pfam PF07690 Major Facilitator Superfamily 218 385 5.1E-9 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS19605 95bf58a0690fcdbdc5cfd7fc9c89844d 394 Pfam PF07690 Major Facilitator Superfamily 18 196 5.1E-25 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS19605 95bf58a0690fcdbdc5cfd7fc9c89844d 394 Gene3D G3DSA:1.20.1250.20 7 197 1.2E-26 T 28-03-2018 CI104_RS19605 95bf58a0690fcdbdc5cfd7fc9c89844d 394 SUPERFAMILY SSF103473 8 388 3.79E-52 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS19605 95bf58a0690fcdbdc5cfd7fc9c89844d 394 Gene3D G3DSA:1.20.1250.20 199 392 1.4E-14 T 28-03-2018 CI104_RS09950 82c8d3a4612705fc6deef1ac6d102b9a 374 Gene3D G3DSA:3.40.630.30 184 370 3.5E-10 T 28-03-2018 CI104_RS09950 82c8d3a4612705fc6deef1ac6d102b9a 374 Gene3D G3DSA:3.40.630.30 2 131 0.013 T 28-03-2018 CI104_RS09950 82c8d3a4612705fc6deef1ac6d102b9a 374 SUPERFAMILY SSF55729 139 371 9.27E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS09950 82c8d3a4612705fc6deef1ac6d102b9a 374 SUPERFAMILY SSF55729 4 111 9.27E-22 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS11665 1a2226e8e034e38262855761b5f6fa16 278 SUPERFAMILY SSF51569 2 277 1.76E-82 T 28-03-2018 CI104_RS11665 1a2226e8e034e38262855761b5f6fa16 278 Gene3D G3DSA:3.20.20.70 1 278 4.0E-81 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS11665 1a2226e8e034e38262855761b5f6fa16 278 Pfam PF01116 Fructose-bisphosphate aldolase class-II 10 276 1.2E-87 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS11665 1a2226e8e034e38262855761b5f6fa16 278 TIGRFAM TIGR00167 cbbA: ketose-bisphosphate aldolase 1 277 3.3E-97 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS11665 1a2226e8e034e38262855761b5f6fa16 278 PIRSF PIRSF001359 1 277 3.1E-77 T 28-03-2018 IPR000771 Fructose-bisphosphate aldolase, class-II GO:0005975|GO:0008270|GO:0016832 CI104_RS06815 f05188c1faab0b3ba7c7b73f65ea5d92 603 Pfam PF03237 Terminase-like family 170 388 6.3E-41 T 28-03-2018 CI104_RS06815 f05188c1faab0b3ba7c7b73f65ea5d92 603 Gene3D G3DSA:1.10.1660.10 30 84 0.0047 T 28-03-2018 CI104_RS06815 f05188c1faab0b3ba7c7b73f65ea5d92 603 Pfam PF17289 Terminase RNaseH-like domain 418 584 1.2E-34 T 28-03-2018 IPR035421 Terminase, large subunit gp17-like CI104_RS06815 f05188c1faab0b3ba7c7b73f65ea5d92 603 Pfam PF06056 Putative ATPase subunit of terminase (gpP-like) 7 62 1.7E-14 T 28-03-2018 IPR010332 ATPase terminase subunit, putative GO:0005524|GO:0019069 CI104_RS06815 f05188c1faab0b3ba7c7b73f65ea5d92 603 Gene3D G3DSA:1.10.10.60 2 29 1.3E-4 T 28-03-2018 CI104_RS06815 f05188c1faab0b3ba7c7b73f65ea5d92 603 SUPERFAMILY SSF46689 2 85 1.79E-5 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS03725 88e64b024e92acac03a65050de367ba1 201 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 12 176 9.5E-77 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS03725 88e64b024e92acac03a65050de367ba1 201 Gene3D G3DSA:3.20.130.10 1 176 1.3E-61 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS03725 88e64b024e92acac03a65050de367ba1 201 Pfam PF05683 Fumarase C-terminus 9 175 6.2E-40 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS03725 88e64b024e92acac03a65050de367ba1 201 SUPERFAMILY SSF117457 3 174 7.85E-57 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS16130 2702c30fdea377c53880b0a841eeb5e1 241 SUPERFAMILY SSF53790 1 239 9.03E-57 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16130 2702c30fdea377c53880b0a841eeb5e1 241 TIGRFAM TIGR01466 cobJ_cbiH: precorrin-3B C17-methyltransferase 2 239 1.3E-106 T 28-03-2018 IPR006363 Precorrin-3B C17-methyltransferase domain GO:0008168|GO:0009236 CI104_RS16130 2702c30fdea377c53880b0a841eeb5e1 241 Gene3D G3DSA:3.30.950.10 121 238 1.4E-51 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16130 2702c30fdea377c53880b0a841eeb5e1 241 Gene3D G3DSA:3.40.1010.10 1 120 5.8E-34 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16130 2702c30fdea377c53880b0a841eeb5e1 241 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 208 2.4E-39 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS24685 7e8d0dfb823efbc8615da2e9d6c2ffa4 176 TIGRFAM TIGR01410 tatB: twin arginine-targeting protein translocase TatB 2 80 1.2E-31 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CI104_RS24685 7e8d0dfb823efbc8615da2e9d6c2ffa4 176 Hamap MF_00237 Sec-independent protein translocase protein TatB [tatB]. 1 143 18.69 T 28-03-2018 IPR018448 Twin-arginine translocation protein TatB GO:0016020|GO:0043953 CI104_RS24685 7e8d0dfb823efbc8615da2e9d6c2ffa4 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 40 58 2.1E-33 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CI104_RS24685 7e8d0dfb823efbc8615da2e9d6c2ffa4 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 21 40 2.1E-33 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CI104_RS24685 7e8d0dfb823efbc8615da2e9d6c2ffa4 176 PRINTS PR01506 Bacterial sec-independent translocation TatB protein signature 1 21 2.1E-33 T 28-03-2018 IPR003998 Twin-arginine translocation protein TatB-like GO:0009306|GO:0016020 CI104_RS24685 7e8d0dfb823efbc8615da2e9d6c2ffa4 176 Gene3D G3DSA:1.20.120.290 31 111 9.1E-4 T 28-03-2018 CI104_RS05245 fb2358bf7124852d89b85ab2d68028c8 232 Pfam PF01048 Phosphorylase superfamily 2 226 1.6E-47 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS05245 fb2358bf7124852d89b85ab2d68028c8 232 Gene3D G3DSA:3.40.50.1580 1 232 5.0E-57 T 28-03-2018 CI104_RS05245 fb2358bf7124852d89b85ab2d68028c8 232 SUPERFAMILY SSF53167 1 229 9.3E-75 T 28-03-2018 IPR000845 Nucleoside phosphorylase domain GO:0003824|GO:0009116 CI104_RS05245 fb2358bf7124852d89b85ab2d68028c8 232 TIGRFAM TIGR01704 MTA/SAH-Nsdase: MTA/SAH nucleosidase 2 229 7.5E-134 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS05245 fb2358bf7124852d89b85ab2d68028c8 232 Hamap MF_01684 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase [mtnN]. 2 229 47.535 T 28-03-2018 IPR010049 MTA/SAH nucleosidase GO:0008782|GO:0008930|GO:0009164|GO:0019509 KEGG: 00270+3.2.2.9|MetaCyc: PWY-6151|MetaCyc: PWY-6153|MetaCyc: PWY-6154 CI104_RS24340 d86930e194495eace1104dd13fe857c4 145 Gene3D G3DSA:3.40.930.10 2 145 2.2E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS24340 d86930e194495eace1104dd13fe857c4 145 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 7 145 1.2E-27 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS24340 d86930e194495eace1104dd13fe857c4 145 SUPERFAMILY SSF55804 7 145 7.59E-30 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS03555 13dd27753f3a49327969cda9a56fd356 149 TIGRFAM TIGR01635 tail_comp_S: phage virion morphogenesis protein 3 132 9.7E-32 T 28-03-2018 IPR006522 Phage virion morphogensis protein CI104_RS03555 13dd27753f3a49327969cda9a56fd356 149 Pfam PF05069 Phage virion morphogenesis family 3 146 4.7E-39 T 28-03-2018 IPR006522 Phage virion morphogensis protein CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 ProSitePatterns PS00211 ABC transporters family signature. 165 179 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 SMART SM00382 49 242 4.8E-18 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 Pfam PF08352 Oligopeptide/dipeptide transporter, C-terminal region 244 311 9.8E-19 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 Pfam PF00005 ABC transporter 41 192 9.7E-31 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 TIGRFAM TIGR01727 oligo_HPY: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 242 329 5.6E-28 T 28-03-2018 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal GO:0000166|GO:0005524|GO:0015833 CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 Gene3D G3DSA:3.40.50.300 8 331 1.5E-79 T 28-03-2018 CI104_RS14260 d7a9aed94488743f72bbe7dc733d01ec 334 SUPERFAMILY SSF52540 23 264 6.78E-74 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27615 766fe4fa5c2edd7d8278b283296e30b7 25 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 25 1.3E-19 T 28-03-2018 IPR012605 RepA1 leader peptide Tap CI104_RS27615 766fe4fa5c2edd7d8278b283296e30b7 25 Pfam PF08048 Tap RepA1 leader peptide 1 25 8.3E-21 T 28-03-2018 IPR012605 RepA1 leader peptide Tap CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 ProSitePatterns PS01047 Heavy-metal-associated domain. 28 57 - T 28-03-2018 IPR017969 Heavy-metal-associated, conserved site GO:0030001|GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 TIGRFAM TIGR02052 MerP: mercuric transport protein periplasmic component 1 90 1.9E-44 T 28-03-2018 IPR011795 Mercuric transport protein periplasmic component GO:0015097|GO:0015694|GO:0042597|GO:0045340|GO:0046689 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 Pfam PF00403 Heavy-metal-associated domain 25 85 1.8E-17 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 Gene3D G3DSA:3.30.70.100 20 91 7.8E-24 T 28-03-2018 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 31 47 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 20 31 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 47 62 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 76 90 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 2 20 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 PRINTS PR00946 Mercury scavenger protein signature 62 76 5.8E-57 T 28-03-2018 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ GO:0046872 CI104_RS26595 a297bf89f6d2eec029ae0c1d77112e66 91 SUPERFAMILY SSF55008 17 88 6.15E-22 T 28-03-2018 IPR006121 Heavy metal-associated domain, HMA GO:0030001|GO:0046872 CI104_RS12060 038c28ac64f2136ebf76c31d780815fa 252 TIGRFAM TIGR01093 aroD: 3-dehydroquinate dehydratase, type I 17 245 1.6E-82 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS12060 038c28ac64f2136ebf76c31d780815fa 252 Gene3D G3DSA:3.20.20.70 1 252 7.6E-88 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS12060 038c28ac64f2136ebf76c31d780815fa 252 ProSitePatterns PS01028 Dehydroquinase class I active site. 114 144 - T 28-03-2018 IPR018508 3-dehydroquinate dehydratase, active site GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS12060 038c28ac64f2136ebf76c31d780815fa 252 Hamap MF_00214 3-dehydroquinate dehydratase [aroD]. 17 249 42.799 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS12060 038c28ac64f2136ebf76c31d780815fa 252 Pfam PF01487 Type I 3-dehydroquinase 20 246 1.2E-70 T 28-03-2018 IPR001381 3-dehydroquinate dehydratase type I GO:0003855 KEGG: 00400+4.2.1.10|MetaCyc: PWY-6163|MetaCyc: PWY-6416|MetaCyc: PWY-6707 CI104_RS12060 038c28ac64f2136ebf76c31d780815fa 252 SUPERFAMILY SSF51569 1 251 5.49E-83 T 28-03-2018 CI104_RS10430 73dd116cbd9968078b9d8a471301ff9e 134 Pfam PF00460 Flagella basal body rod protein 7 37 1.3E-10 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CI104_RS10430 73dd116cbd9968078b9d8a471301ff9e 134 TIGRFAM TIGR01395 FlgC: flagellar basal-body rod protein FlgC 4 134 1.0E-51 T 28-03-2018 IPR006299 Flagellar basal-body rod protein FlgC GO:0030694|GO:0071973 CI104_RS10430 73dd116cbd9968078b9d8a471301ff9e 134 Pfam PF06429 Flagellar basal body rod FlgEFG protein C-terminal 87 131 2.7E-12 T 28-03-2018 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CI104_RS10430 73dd116cbd9968078b9d8a471301ff9e 134 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 13 33 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CI104_RS07125 2882f4e90df195f0c4078bab8bf7803a 341 Gene3D G3DSA:3.20.20.150 6 335 1.8E-47 T 28-03-2018 CI104_RS07125 2882f4e90df195f0c4078bab8bf7803a 341 Pfam PF01261 Xylose isomerase-like TIM barrel 30 279 1.1E-34 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS07125 2882f4e90df195f0c4078bab8bf7803a 341 Pfam PF07582 AP endonuclease family 2 C terminus 280 334 8.0E-21 T 28-03-2018 IPR011418 AP endonuclease, family 2, C-terminal CI104_RS07125 2882f4e90df195f0c4078bab8bf7803a 341 SUPERFAMILY SSF51658 7 323 8.84E-59 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS06100 3c5b014945aa81c93a7ac35d31cb729e 225 Gene3D G3DSA:3.40.50.1860 21 225 9.4E-6 T 28-03-2018 CI104_RS06100 3c5b014945aa81c93a7ac35d31cb729e 225 Pfam PF07302 AroM protein 5 224 4.7E-71 T 28-03-2018 IPR010843 Uncharacterised protein family AroM CI104_RS06100 3c5b014945aa81c93a7ac35d31cb729e 225 ProDom PD037589 AROM ARO OPERON REGULATED BY AROR BIOSYNTHESIS TRANSCRIPTION AMINO AROMATIC 5 223 2.0E-92 T 28-03-2018 IPR010843 Uncharacterised protein family AroM CI104_RS00610 a038a0f4e28ce8739e02e41c674c6924 326 Hamap MF_01601 ADP-L-glycero-D-manno-heptose-6-epimerase [hldD]. 1 309 49.939 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CI104_RS00610 a038a0f4e28ce8739e02e41c674c6924 326 Gene3D G3DSA:3.90.25.10 183 312 2.3E-19 T 28-03-2018 CI104_RS00610 a038a0f4e28ce8739e02e41c674c6924 326 SUPERFAMILY SSF51735 1 306 1.81E-62 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS00610 a038a0f4e28ce8739e02e41c674c6924 326 Pfam PF01370 NAD dependent epimerase/dehydratase family 2 236 7.8E-46 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS00610 a038a0f4e28ce8739e02e41c674c6924 326 Gene3D G3DSA:3.40.50.720 1 182 6.5E-22 T 28-03-2018 CI104_RS00610 a038a0f4e28ce8739e02e41c674c6924 326 TIGRFAM TIGR02197 heptose_epim: ADP-glyceromanno-heptose 6-epimerase 2 308 2.3E-137 T 28-03-2018 IPR011912 ADP-L-glycero-D-manno-heptose-6-epimerase GO:0005975|GO:0008712|GO:0050661 KEGG: 00540+5.1.3.20 CI104_RS08350 2da427c9c1b2e10d295c87be5a2eb03e 136 Pfam PF11076 Putative inner membrane protein YbhQ 1 132 9.2E-68 T 28-03-2018 IPR021303 Uncharacterised protein family, inner membrane, YbhQ CI104_RS09775 486b766a4288f1b962c50042188a3c0d 178 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 18 167 2.7E-36 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CI104_RS09775 486b766a4288f1b962c50042188a3c0d 178 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 8 158 9.5E-23 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CI104_RS28725 4d1ebd281e124b283870b917e10326d3 259 PIRSF PIRSF004576 2 257 9.4E-115 T 28-03-2018 IPR016423 Resolvase, Rsv CI104_RS28725 4d1ebd281e124b283870b917e10326d3 259 Gene3D G3DSA:1.10.443.10 40 234 1.4E-27 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS28725 4d1ebd281e124b283870b917e10326d3 259 Pfam PF00589 Phage integrase family 41 232 2.6E-48 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS28725 4d1ebd281e124b283870b917e10326d3 259 SUPERFAMILY SSF56349 39 233 7.65E-27 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS01675 887ae67986a9ff0fb675778c42969fb3 227 SUPERFAMILY SSF53271 46 225 7.47E-36 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS01675 887ae67986a9ff0fb675778c42969fb3 227 TIGRFAM TIGR00201 comF: comF family protein 23 225 2.0E-70 T 28-03-2018 IPR005222 Competence protein ComF CI104_RS01675 887ae67986a9ff0fb675778c42969fb3 227 Gene3D G3DSA:3.40.50.2020 59 227 1.1E-23 T 28-03-2018 CI104_RS01675 887ae67986a9ff0fb675778c42969fb3 227 Pfam PF00156 Phosphoribosyl transferase domain 169 224 8.0E-8 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 ProSitePatterns PS00170 Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 36 53 - T 28-03-2018 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site GO:0003755|GO:0006457 CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 PIRSF PIRSF001467 1 164 2.1E-28 T 28-03-2018 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase GO:0003755 CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 Gene3D G3DSA:2.40.100.10 1 164 1.8E-52 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 41 53 1.0E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 118 133 1.0E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 PRINTS PR00153 Cyclophilin peptidyl-prolyl cis-trans isomerase signature 15 30 1.0E-11 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 SUPERFAMILY SSF50891 1 162 9.06E-60 T 28-03-2018 IPR029000 Cyclophilin-like domain CI104_RS06985 c13ffc94a42638d86ab2445122f07ba7 164 Pfam PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 1 161 5.0E-48 T 28-03-2018 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain GO:0000413|GO:0003755|GO:0006457 CI104_RS14425 9360f8c1dad1e358ff3d9ebf1b036850 130 Pfam PF04247 Invasion gene expression up-regulator, SirB 7 127 8.8E-35 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CI104_RS14425 9360f8c1dad1e358ff3d9ebf1b036850 130 PIRSF PIRSF005610 1 125 5.0E-20 T 28-03-2018 IPR007360 Invasion gene expression up-regulator, SirB CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 330 349 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 400 421 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 243 262 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 263 282 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 445 463 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 147 167 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PRINTS PR00998 Carboxypeptidase Taq (M32) metallopeptidase signature 290 306 3.5E-43 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 PIRSF PIRSF006615 1 494 1.2E-191 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 Pfam PF02074 Carboxypeptidase Taq (M32) metallopeptidase 13 493 1.4E-89 T 28-03-2018 IPR001333 Peptidase M32, carboxypeptidase Taq GO:0004181|GO:0006508 CI104_RS12660 6075290d207754fee654ddb393148112 494 SUPERFAMILY SSF55486 1 494 7.45E-119 T 28-03-2018 CI104_RS12660 6075290d207754fee654ddb393148112 494 Gene3D G3DSA:1.10.1370.10 44 492 8.1E-29 T 28-03-2018 CI104_RS06735 fdbebaaab7509879f74f9f233dffcba8 394 Pfam PF04865 Baseplate J-like protein 81 326 6.7E-29 T 28-03-2018 IPR006949 Baseplate protein J-like CI104_RS06140 310886c72266baf39315d4da966910de 439 Pfam PF05525 Branched-chain amino acid transport protein 7 429 4.5E-160 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CI104_RS06140 310886c72266baf39315d4da966910de 439 TIGRFAM TIGR00796 livcs: branched-chain amino acid transport system II carrier protein 14 415 1.3E-162 T 28-03-2018 IPR004685 Branched-chain amino acid transport system II carrier protein GO:0015658|GO:0015803|GO:0016021 CI104_RS09215 11f47cfbfc012f2270d16ac6f652f4a2 417 Pfam PF04403 Paraquat-inducible protein A 253 408 2.2E-53 T 28-03-2018 IPR007498 Paraquat-inducible protein A CI104_RS09215 11f47cfbfc012f2270d16ac6f652f4a2 417 Pfam PF04403 Paraquat-inducible protein A 49 200 1.4E-40 T 28-03-2018 IPR007498 Paraquat-inducible protein A CI104_RS09215 11f47cfbfc012f2270d16ac6f652f4a2 417 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 1 408 1.1E-189 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CI104_RS00580 0d733e3a9a59f33470f14389d2039eec 232 Gene3D G3DSA:1.10.510.10 90 225 3.3E-4 T 28-03-2018 CI104_RS00580 0d733e3a9a59f33470f14389d2039eec 232 Pfam PF06176 Lipopolysaccharide core biosynthesis protein (WaaY) 1 229 6.2E-123 T 28-03-2018 IPR009330 Lipopolysaccharide core heptose(II) kinase CI104_RS00580 0d733e3a9a59f33470f14389d2039eec 232 SUPERFAMILY SSF56112 98 180 2.55E-10 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS00580 0d733e3a9a59f33470f14389d2039eec 232 SUPERFAMILY SSF56112 23 71 2.55E-10 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS16510 491d421bc339b198132b48cf3d114bb2 321 Gene3D G3DSA:3.40.50.720 1 161 1.4E-9 T 28-03-2018 CI104_RS16510 491d421bc339b198132b48cf3d114bb2 321 Pfam PF01370 NAD dependent epimerase/dehydratase family 6 231 3.7E-73 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS16510 491d421bc339b198132b48cf3d114bb2 321 SUPERFAMILY SSF51735 1 318 1.86E-74 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16510 491d421bc339b198132b48cf3d114bb2 321 Gene3D G3DSA:3.90.25.10 162 321 6.6E-45 T 28-03-2018 CI104_RS16510 491d421bc339b198132b48cf3d114bb2 321 Hamap MF_00956 GDP-L-fucose synthase [fcl]. 3 314 49.361 T 28-03-2018 IPR028614 GDP-L-fucose synthase/GDP-L-colitose synthase GO:0009226|GO:0016491 KEGG: 00010+1.1.1.27|KEGG: 00051+1.1.1.271|KEGG: 00270+1.1.1.27|KEGG: 00520+1.1.1.271|KEGG: 00620+1.1.1.27|KEGG: 00640+1.1.1.27|MetaCyc: PWY-5481|MetaCyc: PWY-66|MetaCyc: PWY-6901|Reactome: R-HSA-6787639 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 TIGRFAM TIGR00935 2a45: arsenite/antimonite efflux pump membrane protein 3 426 1.6E-218 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 101 125 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 397 421 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 217 242 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 323 345 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 364 389 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 144 168 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 278 302 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 PRINTS PR00758 Arsenical pump membrane protein signature 177 200 4.7E-123 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS20855 5b68390033d60809d178dd8dd7b0d092 429 Pfam PF02040 Arsenical pump membrane protein 3 423 2.2E-162 T 28-03-2018 IPR000802 Arsenical pump membrane protein, ArsB GO:0015105|GO:0015700|GO:0016021 CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 Gene3D G3DSA:3.90.226.10 7 224 1.2E-64 T 28-03-2018 CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 ProSitePatterns PS00166 Enoyl-CoA hydratase/isomerase signature. 123 143 - T 28-03-2018 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site GO:0003824|GO:0008152 CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 Hamap MF_01934 1,4-dihydroxy-2-naphthoyl-CoA synthase [menB]. 15 284 55.603 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 Pfam PF00378 Enoyl-CoA hydratase/isomerase 31 279 5.5E-79 T 28-03-2018 IPR001753 Crotonase superfamily GO:0003824|GO:0008152 CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 TIGRFAM TIGR01929 menB: naphthoate synthase 22 281 2.7E-151 T 28-03-2018 IPR010198 1,4-Dihydroxy-2-naphthoyl-CoA synthase, MenB GO:0008935|GO:0009234 KEGG: 00130+4.1.3.36|MetaCyc: PWY-5837 CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 Gene3D G3DSA:1.10.12.10 225 273 3.4E-13 T 28-03-2018 IPR014748 Crontonase, C-terminal CI104_RS17450 9bacc881f606b69f83451d5be4408d23 285 SUPERFAMILY SSF52096 15 280 1.71E-79 T 28-03-2018 IPR029045 ClpP/crotonase-like domain CI104_RS16730 d3b6a6eaa2cb2b81ca915f472fbb2444 243 SMART SM00422 4 73 4.5E-29 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS16730 d3b6a6eaa2cb2b81ca915f472fbb2444 243 Pfam PF13411 MerR HTH family regulatory protein 4 72 2.9E-18 T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS16730 d3b6a6eaa2cb2b81ca915f472fbb2444 243 ProSitePatterns PS00552 MerR-type HTH domain signature. 7 30 - T 28-03-2018 IPR000551 MerR-type HTH domain GO:0003677|GO:0006355 CI104_RS16730 d3b6a6eaa2cb2b81ca915f472fbb2444 243 Gene3D G3DSA:1.10.1660.10 1 139 2.9E-25 T 28-03-2018 CI104_RS16730 d3b6a6eaa2cb2b81ca915f472fbb2444 243 SUPERFAMILY SSF46955 3 92 1.01E-19 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS15280 93a339084ff883fd1e79170d57dacec2 220 Pfam PF00929 Exonuclease 4 147 1.6E-14 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS15280 93a339084ff883fd1e79170d57dacec2 220 SUPERFAMILY SSF53098 4 182 1.87E-33 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS15280 93a339084ff883fd1e79170d57dacec2 220 SMART SM00479 1 156 1.7E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS15280 93a339084ff883fd1e79170d57dacec2 220 Gene3D G3DSA:3.30.420.10 1 163 1.6E-29 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS23980 9ea781b3dd2da3eba90f6b4ccfdbdbb7 577 Gene3D G3DSA:3.40.720.10 230 535 4.3E-21 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS23980 9ea781b3dd2da3eba90f6b4ccfdbdbb7 577 SUPERFAMILY SSF53649 236 554 3.92E-29 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS23980 9ea781b3dd2da3eba90f6b4ccfdbdbb7 577 Pfam PF00884 Sulfatase 238 529 4.7E-44 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS27715 a5b08ff73dbba0911e28a714eb37296b 209 Pfam PF09673 Type-F conjugative transfer system pilin assembly protein 93 174 2.5E-18 T 28-03-2018 IPR019106 Type-F conjugative transfer system pilin assembly protein TrbC CI104_RS27715 a5b08ff73dbba0911e28a714eb37296b 209 TIGRFAM TIGR02742 TrbC_Ftype: type-F conjugative transfer system pilin assembly protein TrbC 92 204 2.6E-32 T 28-03-2018 IPR014113 Type-F conjugative transfer system pilin assembly protein TrbC, subgroup CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 158 177 2.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 84 95 2.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00080 Short-chain dehydrogenase/reductase (SDR) superfamily signature 138 146 2.7E-13 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 TIGRFAM TIGR01832 kduD: 2-deoxy-D-gluconate 3-dehydrogenase 6 253 4.4E-137 T 28-03-2018 IPR011286 2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase GO:0008678|GO:0051287|GO:0055114 KEGG: 00040+1.1.1.12+1.1.1.127|MetaCyc: PWY-5515|MetaCyc: PWY-6507|MetaCyc: PWY-7562 CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 84 95 1.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 214 234 1.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 132 148 1.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 12 29 1.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 158 177 1.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 PRINTS PR00081 Glucose/ribitol dehydrogenase family signature 179 196 1.1E-39 T 28-03-2018 IPR002347 Short-chain dehydrogenase/reductase SDR CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 SUPERFAMILY SSF51735 9 252 6.48E-76 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 Gene3D G3DSA:3.40.50.720 44 253 8.3E-58 T 28-03-2018 CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 Gene3D G3DSA:3.40.50.720 3 43 2.8E-6 T 28-03-2018 CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 ProSitePatterns PS00061 Short-chain dehydrogenases/reductases family signature. 145 173 - T 28-03-2018 IPR020904 Short-chain dehydrogenase/reductase, conserved site GO:0016491 CI104_RS20445 f8bf8bfa73064807de22e70fd078f8e6 253 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 20 250 4.3E-56 T 28-03-2018 CI104_RS03770 c28346e95f5ae5bd49361ad8fe586e2f 433 SUPERFAMILY SSF55154 1 219 3.6E-50 T 28-03-2018 IPR033469 CYTH-like domain Reactome: R-HSA-196819 CI104_RS03770 c28346e95f5ae5bd49361ad8fe586e2f 433 Pfam PF01928 CYTH domain 3 196 1.3E-32 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CI104_RS03770 c28346e95f5ae5bd49361ad8fe586e2f 433 Gene3D G3DSA:2.40.320.10 1 202 6.9E-45 T 28-03-2018 CI104_RS03770 c28346e95f5ae5bd49361ad8fe586e2f 433 SMART SM01118 2 202 2.3E-41 T 28-03-2018 IPR023577 CYTH domain Reactome: R-HSA-196819 CI104_RS14530 f4522ad2d9a65961ffffd1fa050c641b 159 SUPERFAMILY SSF46785 1 137 7.48E-20 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14530 f4522ad2d9a65961ffffd1fa050c641b 159 Gene3D G3DSA:1.10.10.10 2 146 7.0E-13 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14530 f4522ad2d9a65961ffffd1fa050c641b 159 Pfam PF02082 Transcriptional regulator 2 81 1.2E-13 T 28-03-2018 IPR000944 Transcription regulator Rrf2-type CI104_RS12600 6411daae521b7deebe1e7ea7c9f44edb 111 Pfam PF06942 GlpM protein 5 111 2.5E-51 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC CI104_RS12600 6411daae521b7deebe1e7ea7c9f44edb 111 ProDom PD028709 MEMBRANE INNER YDGC GLPM ALGINATE BIOSYNTHESIS TRANSMEMBRANE REQUIRED FOR UNCHARACTERIZED 23 111 2.0E-40 T 28-03-2018 IPR009707 Membrane protein GlpM/YdgC CI104_RS08140 2a237f993f83961d06021f138f87f574 124 Pfam PF13985 YbgS-like protein 4 124 4.3E-52 T 28-03-2018 IPR020363 Uncharacterised protein family YbgS CI104_RS08140 2a237f993f83961d06021f138f87f574 124 ProDom PD079292 YBGS HOMEOBOX PRECURSOR SIGNAL PROBABLE SECRETED 50 124 9.0E-30 T 28-03-2018 IPR020363 Uncharacterised protein family YbgS CI104_RS22020 1b8eae8aee6dda1308e7c73f66f1bf4f 141 Hamap MF_01888 Regulator of ribonuclease activity B [rraB]. 4 117 31.675 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B CI104_RS22020 1b8eae8aee6dda1308e7c73f66f1bf4f 141 PIRSF PIRSF018193 1 141 1.7E-66 T 28-03-2018 IPR016716 Regulator of ribonuclease activity B CI104_RS22020 1b8eae8aee6dda1308e7c73f66f1bf4f 141 Pfam PF06877 Regulator of ribonuclease activity B 12 113 3.4E-34 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CI104_RS22020 1b8eae8aee6dda1308e7c73f66f1bf4f 141 Gene3D G3DSA:3.30.70.970 3 116 4.2E-43 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CI104_RS22020 1b8eae8aee6dda1308e7c73f66f1bf4f 141 SUPERFAMILY SSF89946 2 122 2.88E-42 T 28-03-2018 IPR009671 Regulator of ribonuclease activity B domain CI104_RS15660 f089d7e2832f0b03fb8453abba053808 259 Gene3D G3DSA:1.10.10.10 6 107 1.3E-9 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15660 f089d7e2832f0b03fb8453abba053808 259 SMART SM00862 27 104 2.8E-5 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS15660 f089d7e2832f0b03fb8453abba053808 259 Pfam PF00486 Transcriptional regulatory protein, C terminal 30 101 3.7E-6 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS15660 f089d7e2832f0b03fb8453abba053808 259 SUPERFAMILY SSF46894 22 103 3.68E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS13670 5f9fcedaef5bfa73983a8e7a7a15d3aa 151 SUPERFAMILY SSF49401 6 151 1.84E-7 T 28-03-2018 IPR008966 Adhesion domain CI104_RS13670 5f9fcedaef5bfa73983a8e7a7a15d3aa 151 Gene3D G3DSA:2.60.40.1090 1 151 1.9E-12 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS17405 4a6db2a09767d94fb30ad269152fe320 327 Gene3D G3DSA:3.90.550.10 6 229 1.1E-29 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS17405 4a6db2a09767d94fb30ad269152fe320 327 Hamap MF_01164 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [arnC]. 2 326 60.679 T 28-03-2018 IPR022857 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase GO:0016780 KEGG: 00520+2.4.2.53 CI104_RS17405 4a6db2a09767d94fb30ad269152fe320 327 SUPERFAMILY SSF53448 9 229 9.0E-37 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS17405 4a6db2a09767d94fb30ad269152fe320 327 Pfam PF00535 Glycosyl transferase family 2 11 171 4.7E-33 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS22695 0939ef1edae663506ab2b0161fe8577d 416 Pfam PF13520 Amino acid permease 8 404 8.8E-32 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS22695 0939ef1edae663506ab2b0161fe8577d 416 PIRSF PIRSF006060 1 410 2.4E-57 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS09665 346308c96c614fb6c1f62b444174c761 165 Pfam PF05591 Type VI secretion system, VipA, VC_A0107 or Hcp2 7 157 2.0E-54 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CI104_RS09665 346308c96c614fb6c1f62b444174c761 165 TIGRFAM TIGR03358 VI_chp_5: type VI secretion protein, VC_A0107 family 5 158 7.3E-51 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CI104_RS09665 346308c96c614fb6c1f62b444174c761 165 PIRSF PIRSF028301 1 165 3.8E-53 T 28-03-2018 IPR008312 Type VI secretion system, VipA, VC_A0107 or Hcp2 CI104_RS04330 325a9c9d7aee4a487f382966c0991ae9 147 Pfam PF03479 Domain of unknown function (DUF296) 14 120 9.8E-22 T 28-03-2018 IPR005175 PPC domain CI104_RS04330 325a9c9d7aee4a487f382966c0991ae9 147 SUPERFAMILY SSF117856 10 139 5.23E-33 T 28-03-2018 CI104_RS04330 325a9c9d7aee4a487f382966c0991ae9 147 Gene3D G3DSA:3.30.1330.80 12 147 1.6E-36 T 28-03-2018 CI104_RS00560 6318e2ca16420e42f9d811f1d5808b39 313 Pfam PF07922 Glycosyltransferase family 52 30 292 3.5E-33 T 28-03-2018 IPR012477 Glycosyltransferase family 52 CI104_RS08065 0045d8d18de345ae7db8e179a397a12b 142 Gene3D G3DSA:3.20.20.70 5 140 6.0E-4 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS08065 0045d8d18de345ae7db8e179a397a12b 142 TIGRFAM TIGR02801 tolR: protein TolR 13 140 6.1E-39 T 28-03-2018 IPR014168 Biopolymer transport, TolR GO:0015031|GO:0016021 CI104_RS08065 0045d8d18de345ae7db8e179a397a12b 142 Pfam PF02472 Biopolymer transport protein ExbD/TolR 10 141 4.1E-24 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CI104_RS18785 101ad78fb0e7802906d1c7f6aa4e5033 282 Gene3D G3DSA:3.40.50.10490 81 273 1.5E-34 T 28-03-2018 CI104_RS18785 101ad78fb0e7802906d1c7f6aa4e5033 282 Gene3D G3DSA:1.10.10.10 1 77 3.3E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS18785 101ad78fb0e7802906d1c7f6aa4e5033 282 Pfam PF01380 SIS domain 128 257 8.1E-30 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS18785 101ad78fb0e7802906d1c7f6aa4e5033 282 SUPERFAMILY SSF53697 104 276 3.02E-36 T 28-03-2018 CI104_RS18785 101ad78fb0e7802906d1c7f6aa4e5033 282 SUPERFAMILY SSF46689 1 77 3.23E-19 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS18785 101ad78fb0e7802906d1c7f6aa4e5033 282 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 76 1.6E-27 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 SUPERFAMILY SSF53850 93 293 9.77E-41 T 28-03-2018 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 Gene3D G3DSA:1.10.10.10 1 89 6.6E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 6 64 3.7E-18 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 Pfam PF03466 LysR substrate binding domain 92 292 2.1E-41 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 32 42 7.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 21 32 7.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 42 53 7.5E-7 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 SUPERFAMILY SSF46785 3 84 4.99E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 Gene3D G3DSA:3.40.190.10 184 266 1.1E-21 T 28-03-2018 CI104_RS20430 c8ed07146e4698c6f57b5a6faf663121 311 Gene3D G3DSA:3.40.190.10 93 183 1.0E-21 T 28-03-2018 CI104_RS03600 bd45a454d157d413d3c44532dbb79645 390 Pfam PF17482 Phage tail sheath C-terminal domain 275 377 1.1E-18 T 28-03-2018 IPR020287 Tail sheath protein, C-terminal domain CI104_RS03600 bd45a454d157d413d3c44532dbb79645 390 Pfam PF04984 Phage tail sheath protein subtilisin-like domain 108 273 5.3E-33 T 28-03-2018 IPR035089 Tail sheath protein, subtilisin-like domain CI104_RS09975 f480477bfe0457e3f23c2ade503dbfff 355 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 3 349 5.0E-82 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CI104_RS09975 f480477bfe0457e3f23c2ade503dbfff 355 Pfam PF03739 Predicted permease YjgP/YjgQ family 7 349 1.2E-48 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 21 36 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 36 51 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 251 263 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 121 139 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 104 121 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 161 179 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 56 71 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 82 101 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 PRINTS PR01010 Flagellar P-ring protein signature 187 205 1.0E-91 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 Pfam PF02119 Flagellar P-ring protein 21 364 1.5E-137 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS10460 37e1193ef802642230541e09b3194a6c 365 Hamap MF_00416 Flagellar P-ring protein [flgI]. 1 365 39.638 T 28-03-2018 IPR001782 Flagellar P-ring protein GO:0005198|GO:0009428|GO:0030288|GO:0071973 CI104_RS09350 7b3dcda0dea0f4fdb9ec92ad1e0c005b 63 Pfam PF07358 Protein of unknown function (DUF1482) 4 59 6.5E-16 T 28-03-2018 IPR009954 Protein of unknown function DUF1482 CI104_RS08260 d7ec460db9715ecfbfbf7eb7fb54a89e 158 TIGRFAM TIGR00481 TIGR00481: Raf kinase inhibitor-like protein, YbhB/YbcL family 18 157 1.0E-56 T 28-03-2018 IPR005247 YbhB/YbcL CI104_RS08260 d7ec460db9715ecfbfbf7eb7fb54a89e 158 SUPERFAMILY SSF49777 1 157 2.35E-53 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CI104_RS08260 d7ec460db9715ecfbfbf7eb7fb54a89e 158 Pfam PF01161 Phosphatidylethanolamine-binding protein 14 157 7.2E-39 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CI104_RS08260 d7ec460db9715ecfbfbf7eb7fb54a89e 158 Gene3D G3DSA:3.90.280.10 1 158 4.0E-52 T 28-03-2018 IPR008914 Phosphatidylethanolamine-binding protein CI104_RS12440 aa3db21d7bf8f3c9e75861dc2e4a1d81 78 Pfam PF07869 Protein of unknown function (DUF1656) 19 69 4.4E-14 T 28-03-2018 IPR012451 Protein of unknown function DUF1656 CI104_RS28365 8dd8df250a86dcba5a1001b370ab1271 208 TIGRFAM TIGR02743 TraW: type-F conjugative transfer system protein TraW 9 203 2.1E-69 T 28-03-2018 IPR014114 Type-F conjugative transfer system protein TraW CI104_RS28365 8dd8df250a86dcba5a1001b370ab1271 208 Pfam PF12477 Sex factor F TraW protein N terminal 7 32 1.9E-6 T 28-03-2018 IPR025864 Type-F conjugative transfer system protein TraW N-terminal domain CI104_RS27695 38d001a76981b00235a032dd950165f7 82 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 1 72 6.1E-21 T 28-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CI104_RS27695 38d001a76981b00235a032dd950165f7 82 TIGRFAM TIGR02741 TraQ: type-F conjugative transfer system pilin chaperone TraQ 1 82 5.5E-43 T 28-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CI104_RS25430 11a527828c1fc0ee73d1616bf3f69b4c 1062 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 872 948 4.6E-5 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CI104_RS25430 11a527828c1fc0ee73d1616bf3f69b4c 1062 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 529 695 2.6E-10 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CI104_RS25430 11a527828c1fc0ee73d1616bf3f69b4c 1062 Gene3D G3DSA:1.20.120.20 39 828 0.0017 T 28-03-2018 CI104_RS26080 f759ba44c630eba0d0bbe2cd3283cb64 179 Pfam PF01464 Transglycosylase SLT domain 22 123 7.0E-5 T 28-03-2018 IPR008258 Transglycosylase SLT domain 1 CI104_RS26080 f759ba44c630eba0d0bbe2cd3283cb64 179 SUPERFAMILY SSF53955 11 148 6.91E-27 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS26080 f759ba44c630eba0d0bbe2cd3283cb64 179 Gene3D G3DSA:1.10.530.10 17 169 6.5E-11 T 28-03-2018 CI104_RS11490 544232e2ccd995a247298bb1ce5d1b4e 172 Pfam PF02464 Competence-damaged protein 14 164 8.7E-49 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS11490 544232e2ccd995a247298bb1ce5d1b4e 172 SUPERFAMILY SSF142433 14 164 5.62E-45 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS11490 544232e2ccd995a247298bb1ce5d1b4e 172 Gene3D G3DSA:3.90.950.20 3 169 7.1E-45 T 28-03-2018 CI104_RS11490 544232e2ccd995a247298bb1ce5d1b4e 172 TIGRFAM TIGR00199 PncC_domain: amidohydrolase, PncC family 21 162 4.9E-49 T 28-03-2018 IPR008136 CinA, C-terminal CI104_RS06570 26bc55615ccf8540370ff7cb573913e2 124 Pfam PF10757 Biofilm formation regulator YbaJ 1 116 3.8E-64 T 28-03-2018 IPR019693 Biofilm formation regulator YbaJ CI104_RS06770 15817b895d36f91b94e0c05607ad90cc 100 ProDom PD064783 PHAGE HOLIN LYSIS P2 MEMBRANE GPY Y TRANSMEMBRANE HOMOLOG INNER 1 89 5.0E-12 T 28-03-2018 IPR007633 Bacteriophage P2, GpY, holin CI104_RS06770 15817b895d36f91b94e0c05607ad90cc 100 Pfam PF04550 Phage holin family 2 1 86 3.5E-25 T 28-03-2018 IPR007633 Bacteriophage P2, GpY, holin CI104_RS00390 f95a87ebe7c2e7901c642725c7bb32e4 439 Pfam PF03605 Anaerobic c4-dicarboxylate membrane transporter 5 369 8.4E-146 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS00390 f95a87ebe7c2e7901c642725c7bb32e4 439 TIGRFAM TIGR00770 Dcu: transporter, anaerobic C4-dicarboxylate uptake (Dcu) family 6 438 4.5E-153 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS00390 f95a87ebe7c2e7901c642725c7bb32e4 439 PIRSF PIRSF004539 1 438 1.6E-180 T 28-03-2018 IPR004668 Anaerobic c4-dicarboxylate membrane transporter GO:0015556|GO:0015740|GO:0016021 CI104_RS27505 03cb6a1f1832055e9b8c7b89024c1561 218 Gene3D G3DSA:1.10.10.60 158 203 2.5E-5 T 28-03-2018 CI104_RS27505 03cb6a1f1832055e9b8c7b89024c1561 218 SUPERFAMILY SSF53041 1 162 1.57E-27 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27505 03cb6a1f1832055e9b8c7b89024c1561 218 Pfam PF00239 Resolvase, N terminal domain 5 161 8.2E-25 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS27505 03cb6a1f1832055e9b8c7b89024c1561 218 SUPERFAMILY SSF88659 170 215 6.54E-5 T 28-03-2018 IPR013324 RNA polymerase sigma factor, region 3/4 GO:0003677|GO:0003700|GO:0006352|GO:0006355|GO:0016987 CI104_RS27505 03cb6a1f1832055e9b8c7b89024c1561 218 Gene3D G3DSA:3.40.50.1390 1 157 2.6E-35 T 28-03-2018 CI104_RS27505 03cb6a1f1832055e9b8c7b89024c1561 218 SMART SM00857 3 162 2.3E-32 T 28-03-2018 IPR006119 Resolvase, N-terminal catalytic domain GO:0000150|GO:0003677|GO:0006310 CI104_RS15760 a7ffd7dc591ca304e3e8574c0928e3c2 74 Pfam PF10769 Protein of unknown function (DUF2594) 1 74 5.1E-38 T 28-03-2018 CI104_RS21155 04bf34453840ea50107e3ea35b9fd4f9 214 Gene3D G3DSA:3.30.450.20 29 152 1.2E-5 T 28-03-2018 CI104_RS21155 04bf34453840ea50107e3ea35b9fd4f9 214 Pfam PF10144 Bacterial virulence factor haemolysin 1 160 1.7E-65 T 28-03-2018 IPR019305 Uncharacterised protein family Smp CI104_RS21790 9577a10a2d8f4f8efe2dc3c7c4289355 192 Pfam PF11726 Inovirus Gp2 21 171 5.9E-15 T 28-03-2018 CI104_RS27800 c7002f4e96ae212e937c0f6174e81dd4 130 Gene3D G3DSA:1.10.10.450 3 56 1.8E-26 T 28-03-2018 CI104_RS27800 c7002f4e96ae212e937c0f6174e81dd4 130 SUPERFAMILY SSF140581 61 126 6.67E-21 T 28-03-2018 CI104_RS27800 c7002f4e96ae212e937c0f6174e81dd4 130 SUPERFAMILY SSF47729 2 56 1.88E-21 T 28-03-2018 IPR010992 Integration host factor (IHF)-like DNA-binding domain GO:0003677 CI104_RS27800 c7002f4e96ae212e937c0f6174e81dd4 130 Pfam PF05261 TraM protein, DNA-binding 1 126 1.6E-54 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CI104_RS27800 c7002f4e96ae212e937c0f6174e81dd4 130 ProDom PD008204 TRAM PLASMID CONJUGATION DNA-BINDING 3D-STRUCTURE TRANSFER: SEQUENCING DIRECT CONJUGATIVE MATING 1 126 6.0E-41 T 28-03-2018 IPR007925 Relaxosome protein TraM GO:0000746|GO:0003677 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 106 126 6.5E-9 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 136 160 6.5E-9 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 200 218 6.5E-9 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 397 416 6.5E-9 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 PRINTS PR01036 Tetracycline resistance protein TetB signature 15 39 6.5E-9 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 Gene3D G3DSA:1.20.1250.20 12 199 6.8E-27 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 Gene3D G3DSA:1.20.1250.20 256 464 3.7E-21 T 28-03-2018 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 SUPERFAMILY SSF103473 14 195 1.7E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 SUPERFAMILY SSF103473 245 453 1.7E-57 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 TIGRFAM TIGR00711 efflux_EmrB: drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family 18 433 3.9E-77 T 28-03-2018 IPR004638 Drug resistance transporter EmrB/QacA subfamily GO:0006810|GO:0016021 CI104_RS25075 ac55d10607434e084bc187c8f7aa05bf 475 Pfam PF07690 Major Facilitator Superfamily 17 406 3.6E-46 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 Gene3D G3DSA:3.40.640.10 130 424 3.7E-30 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 SUPERFAMILY SSF55904 567 707 4.97E-44 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 Pfam PF01276 Orn/Lys/Arg decarboxylase, major domain 130 544 5.2E-192 T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 SUPERFAMILY SSF53383 130 562 7.24E-100 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 PIRSF PIRSF009393 1 712 6.4E-280 T 28-03-2018 IPR011193 Ornithine/lysine/arginine decarboxylase GO:0005737|GO:0006520|GO:0016831 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 Gene3D G3DSA:3.90.1150.10 425 594 4.5E-54 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 ProSitePatterns PS00703 Orn/Lys/Arg decarboxylases family 1 pyridoxal-P attachment site. 362 376 - T 28-03-2018 IPR000310 Orn/Lys/Arg decarboxylase, major domain GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 Gene3D G3DSA:3.90.100.10 595 712 8.5E-37 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 Pfam PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain 570 700 2.3E-47 T 28-03-2018 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal GO:0003824 CI104_RS05380 3bb3815be705974c97eadb7d5257d566 712 Pfam PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain 14 124 4.5E-29 T 28-03-2018 IPR005308 Orn/Lys/Arg decarboxylase, N-terminal GO:0016831 CI104_RS09545 cda86ec3487df14b83a3ab70a7c09d2e 65 Pfam PF10948 Protein of unknown function (DUF2635) 3 47 3.9E-20 T 28-03-2018 IPR024400 Protein of unknown function DUF2635 CI104_RS09545 cda86ec3487df14b83a3ab70a7c09d2e 65 ProDom PD027295 GP38 FLUMU BACTERIOPHAGE MU-LIKE ECS4978 SB12 PHAGE ORF10 PROPHAGE 1 42 3.0E-10 T 28-03-2018 IPR024400 Protein of unknown function DUF2635 CI104_RS24435 0368de02a76c8650ddc43eb1f7b69b6e 310 Pfam PF07859 alpha/beta hydrolase fold 75 280 5.8E-67 T 28-03-2018 IPR013094 Alpha/beta hydrolase fold-3 GO:0008152|GO:0016787 CI104_RS24435 0368de02a76c8650ddc43eb1f7b69b6e 310 ProSitePatterns PS01174 Lipolytic enzymes "G-D-X-G" family, putative serine active site. 147 159 - T 28-03-2018 IPR033140 Lipase, GDXG, putative serine active site CI104_RS24435 0368de02a76c8650ddc43eb1f7b69b6e 310 Gene3D G3DSA:3.40.50.1820 1 302 6.3E-55 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS24435 0368de02a76c8650ddc43eb1f7b69b6e 310 SUPERFAMILY SSF53474 25 297 1.13E-64 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS00935 1386cb5857c5def250446603abd33068 192 TIGRFAM TIGR00624 tag: DNA-3-methyladenine glycosylase I 2 181 4.5E-92 T 28-03-2018 IPR004597 DNA-3-methyladenine glycosylase I GO:0006284|GO:0008725 CI104_RS00935 1386cb5857c5def250446603abd33068 192 Gene3D G3DSA:1.10.340.30 1 182 1.0E-83 T 28-03-2018 CI104_RS00935 1386cb5857c5def250446603abd33068 192 Pfam PF03352 Methyladenine glycosylase 6 182 1.3E-80 T 28-03-2018 IPR005019 Methyladenine glycosylase GO:0006284|GO:0008725 CI104_RS00935 1386cb5857c5def250446603abd33068 192 SUPERFAMILY SSF48150 2 183 1.1E-81 T 28-03-2018 IPR011257 DNA glycosylase GO:0003824|GO:0006281 Reactome: R-HSA-110357 CI104_RS21970 8e8a1fb8dc1843f6530be18785114eb2 360 TIGRFAM TIGR04408 LptG_lptG: LPS export ABC transporter permease LptG 6 358 1.9E-137 T 28-03-2018 IPR030923 LPS export ABC transporter permease LptG GO:0043190|GO:0055085 CI104_RS21970 8e8a1fb8dc1843f6530be18785114eb2 360 Pfam PF03739 Predicted permease YjgP/YjgQ family 9 358 5.6E-73 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CI104_RS15925 2d9589feeef25363f737bead2786f2ac 271 TIGRFAM TIGR01486 HAD-SF-IIB-MPGP: mannosyl-3-phosphoglycerate phosphatase family 9 264 9.2E-91 T 28-03-2018 IPR006381 HAD-superfamily hydrolase, superfamily IIB, MPGP GO:0005737|GO:0050531|GO:0051479 KEGG: 00051+3.1.3.70|MetaCyc: PWY-5656 CI104_RS15925 2d9589feeef25363f737bead2786f2ac 271 TIGRFAM TIGR02463 MPGP_rel: mannosyl-3-phosphoglycerate phosphatase homolog 9 232 5.7E-91 T 28-03-2018 CI104_RS15925 2d9589feeef25363f737bead2786f2ac 271 Pfam PF08282 haloacid dehalogenase-like hydrolase 10 232 4.1E-14 T 28-03-2018 IPR023214 HAD-like domain CI104_RS15925 2d9589feeef25363f737bead2786f2ac 271 TIGRFAM TIGR01484 HAD-SF-IIB: HAD hydrolase, family IIB 9 231 1.2E-36 T 28-03-2018 IPR006379 HAD-superfamily hydrolase, subfamily IIB Reactome: R-HSA-446205 CI104_RS15925 2d9589feeef25363f737bead2786f2ac 271 SUPERFAMILY SSF56784 7 232 1.6E-44 T 28-03-2018 IPR023214 HAD-like domain CI104_RS15925 2d9589feeef25363f737bead2786f2ac 271 Gene3D G3DSA:3.30.980.20 94 183 3.1E-30 T 28-03-2018 CI104_RS09520 11f6add5286ce6cac5e556d819895458 134 Pfam PF02924 Bacteriophage lambda head decoration protein D 30 116 2.2E-17 T 28-03-2018 IPR004195 Head decoration protein D GO:0019028 CI104_RS09520 11f6add5286ce6cac5e556d819895458 134 Gene3D G3DSA:2.40.300.10 12 126 1.1E-34 T 28-03-2018 CI104_RS17795 187f5775be89466e08bba201cdfcbfe3 182 Pfam PF04315 Elongation factor P hydroxylase 13 175 9.5E-81 T 28-03-2018 IPR007411 Elongation factor P hydroxylase CI104_RS06020 f3fba02f7f09cddf7a4ba01ea08cb8de 177 Pfam PF00857 Isochorismatase family 7 137 1.3E-25 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS06020 f3fba02f7f09cddf7a4ba01ea08cb8de 177 Gene3D G3DSA:3.40.50.850 1 176 1.3E-33 T 28-03-2018 CI104_RS06020 f3fba02f7f09cddf7a4ba01ea08cb8de 177 SUPERFAMILY SSF52499 3 154 8.11E-35 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS26800 b9f3457cdab230632310dd60fd9d2e94 20 Pfam PF02796 Helix-turn-helix domain of resolvase 1 18 3.2E-6 T 28-03-2018 IPR006120 Resolvase, HTH domain GO:0000150|GO:0003677|GO:0006310 CI104_RS26800 b9f3457cdab230632310dd60fd9d2e94 20 Gene3D G3DSA:1.10.10.60 1 18 4.2E-5 T 28-03-2018 CI104_RS20615 8649c807bf9079de789d01695ac76fdf 201 SUPERFAMILY SSF56349 7 189 1.74E-42 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS20615 8649c807bf9079de789d01695ac76fdf 201 Pfam PF00589 Phage integrase family 12 180 3.2E-49 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS20615 8649c807bf9079de789d01695ac76fdf 201 Gene3D G3DSA:1.10.443.10 11 183 4.4E-38 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS23550 7a87f7b26d4cf88b4e03f750363a392c 164 Pfam PF03830 PTS system sorbose subfamily IIB component 3 149 1.5E-52 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS23550 7a87f7b26d4cf88b4e03f750363a392c 164 SUPERFAMILY SSF52728 1 161 1.57E-54 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS23550 7a87f7b26d4cf88b4e03f750363a392c 164 TIGRFAM TIGR00854 pts-sorbose: PTS system, mannose/fructose/sorbose family, IIB component 2 151 1.4E-68 T 28-03-2018 IPR018455 Phosphotransferase system, sorbose subfamily IIB component, subgroup GO:0005737|GO:0008982|GO:0009401 CI104_RS23550 7a87f7b26d4cf88b4e03f750363a392c 164 Gene3D G3DSA:3.40.35.10 2 158 1.5E-58 T 28-03-2018 IPR004720 Phosphotransferase system, sorbose subfamily IIB component GO:0005737|GO:0008982|GO:0009401 CI104_RS05065 0067aaae36e0e0d965383a99729585ec 81 ProDom PD059807 YMJA ECS1872 1 81 2.0E-33 T 28-03-2018 IPR020251 Uncharacterised protein family, YmjA CI104_RS05065 0067aaae36e0e0d965383a99729585ec 81 Pfam PF10820 Protein of unknown function (DUF2543) 1 81 1.2E-48 T 28-03-2018 IPR020251 Uncharacterised protein family, YmjA CI104_RS22205 fac8c54dc1f02596db8c49e8f76c7baa 342 Pfam PF01738 Dienelactone hydrolase family 61 185 5.9E-11 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CI104_RS22205 fac8c54dc1f02596db8c49e8f76c7baa 342 Gene3D G3DSA:3.40.50.1820 17 341 3.7E-35 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS22205 fac8c54dc1f02596db8c49e8f76c7baa 342 SUPERFAMILY SSF53474 264 342 5.94E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS22205 fac8c54dc1f02596db8c49e8f76c7baa 342 SUPERFAMILY SSF53474 28 194 5.94E-45 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS14190 40728c5d3e85f1470804a0156cd34b88 268 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 3.5E-110 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14190 40728c5d3e85f1470804a0156cd34b88 268 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14190 40728c5d3e85f1470804a0156cd34b88 268 Pfam PF00290 Tryptophan synthase alpha chain 8 266 3.1E-101 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14190 40728c5d3e85f1470804a0156cd34b88 268 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 38.989 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS14190 40728c5d3e85f1470804a0156cd34b88 268 Gene3D G3DSA:3.20.20.70 2 268 4.9E-72 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS14190 40728c5d3e85f1470804a0156cd34b88 268 SUPERFAMILY SSF51366 1 266 1.13E-91 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS16145 2c8e866a0ba3b85c85949a454514881e 189 TIGRFAM TIGR02469 CbiT: precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 13 132 5.3E-42 T 28-03-2018 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit GO:0008276|GO:0009236 KEGG: 00670+2.1.1.19|KEGG: 00860+2.1.1.196|MetaCyc: PWY-2201|MetaCyc: PWY-7377 CI104_RS16145 2c8e866a0ba3b85c85949a454514881e 189 Gene3D G3DSA:3.40.50.150 2 189 6.0E-27 T 28-03-2018 CI104_RS16145 2c8e866a0ba3b85c85949a454514881e 189 SUPERFAMILY SSF53335 3 156 2.15E-26 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS16145 2c8e866a0ba3b85c85949a454514881e 189 Pfam PF05175 Methyltransferase small domain 24 103 1.2E-7 T 28-03-2018 IPR007848 Methyltransferase small domain GO:0008168 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProDom PD002389 RIBOSOMAL RRNA-BINDING RNA-BINDING RIBONUCLEOPROTEIN L20 50S L20 CHLOROPLAST BACTERIAL ORGANELLE 21 72 4.0E-14 T 28-03-2018 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 Hamap MF_00382 50S ribosomal protein L20 [rplT]. 2 115 31.068 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 SUPERFAMILY SSF74731 3 117 2.62E-50 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 Pfam PF00453 Ribosomal protein L20 3 109 5.2E-49 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 Gene3D G3DSA:1.10.1900.20 55 116 2.4E-29 T 28-03-2018 IPR035566 Ribosomal protein L20 C-terminal domain Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 75 101 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 42 71 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 PRINTS PR00062 Ribosomal protein L20 signature 12 41 2.4E-42 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 ProSitePatterns PS00937 Ribosomal protein L20 signature. 54 70 - T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS11950 fde9fa85e2bb35caa2b2d6f368888a0a 118 TIGRFAM TIGR01032 rplT_bact: ribosomal protein bL20 1 114 5.3E-53 T 28-03-2018 IPR005813 Ribosomal protein L20 GO:0003735|GO:0005622|GO:0005840|GO:0006412|GO:0019843 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS08605 2df776d7e29aef5e1905d9706ec45a72 380 Pfam PF07995 Glucose / Sorbosone dehydrogenase 34 366 1.0E-129 T 28-03-2018 IPR012938 Glucose/Sorbosone dehydrogenase CI104_RS08605 2df776d7e29aef5e1905d9706ec45a72 380 Gene3D G3DSA:2.120.10.30 17 272 1.3E-43 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CI104_RS08605 2df776d7e29aef5e1905d9706ec45a72 380 Gene3D G3DSA:2.120.10.30 273 363 3.4E-16 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CI104_RS08605 2df776d7e29aef5e1905d9706ec45a72 380 SUPERFAMILY SSF50952 23 370 3.79E-43 T 28-03-2018 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase GO:0003824 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PIRSF PIRSF000723 3 303 4.0E-112 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 TIGRFAM TIGR00746 arcC: carbamate kinase 6 301 1.5E-114 T 28-03-2018 IPR003964 Carbamate kinase GO:0006525|GO:0008804 KEGG: 00220+2.7.2.2|KEGG: 00230+2.7.2.2|KEGG: 00910+2.7.2.2 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 SUPERFAMILY SSF53633 6 301 2.62E-75 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 Pfam PF00696 Amino acid kinase family 6 276 4.1E-27 T 28-03-2018 IPR001048 Aspartate/glutamate/uridylate kinase CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 258 273 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 207 222 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 154 173 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 177 195 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 75 93 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 45 64 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 PRINTS PR01469 Bacterial carbamate kinase signature 106 125 1.1E-62 T 28-03-2018 CI104_RS22050 58ac870f4bca2091fd693c22d6fab813 308 Gene3D G3DSA:3.40.1160.10 3 303 3.4E-48 T 28-03-2018 CI104_RS17290 2e72deadfebbfe2cb284222dedfae882 132 SUPERFAMILY SSF141530 4 113 6.93E-20 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS17290 2e72deadfebbfe2cb284222dedfae882 132 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 5 113 5.9E-20 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS17290 2e72deadfebbfe2cb284222dedfae882 132 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 13 105 2.0E-10 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS17290 2e72deadfebbfe2cb284222dedfae882 132 Gene3D G3DSA:2.40.33.40 3 116 2.5E-23 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS25105 1b084e07c156eab613b3512d822ef647 139 Hamap MF_01661 D-ribose pyranase [rbsD]. 1 139 33.238 T 28-03-2018 IPR023064 D-ribose pyranase GO:0016872 CI104_RS25105 1b084e07c156eab613b3512d822ef647 139 SUPERFAMILY SSF102546 1 139 4.97E-45 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS25105 1b084e07c156eab613b3512d822ef647 139 Gene3D G3DSA:3.40.1650.10 1 139 2.6E-40 T 28-03-2018 IPR023750 RbsD-like domain GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS25105 1b084e07c156eab613b3512d822ef647 139 Pfam PF05025 RbsD / FucU transport protein family 1 138 5.3E-48 T 28-03-2018 IPR007721 D-ribose pyranase RbsD/L-fucose mutarotase FucU GO:0005996|GO:0016853|GO:0048029 Reactome: R-HSA-6787639 CI104_RS04915 6b1e453640d80cd045b0ad2413cf9b26 276 Pfam PF03799 Cell division protein FtsQ 130 247 2.2E-27 T 28-03-2018 IPR005548 Cell division protein FtsQ/DivIB CI104_RS04915 6b1e453640d80cd045b0ad2413cf9b26 276 Hamap MF_00911 Cell division protein FtsQ [ftsQ]. 26 255 25.955 T 28-03-2018 IPR026579 Cell division protein FtsQ GO:0090529 CI104_RS04915 6b1e453640d80cd045b0ad2413cf9b26 276 Pfam PF08478 POTRA domain, FtsQ-type 57 126 2.1E-20 T 28-03-2018 IPR013685 POTRA domain, FtsQ-type CI104_RS25375 747000de16f9135b76768a73fd398fbd 315 Pfam PF00149 Calcineurin-like phosphoesterase 17 68 4.8E-4 T 28-03-2018 IPR004843 Calcineurin-like phosphoesterase domain, ApaH type GO:0016787 CI104_RS25375 747000de16f9135b76768a73fd398fbd 315 Gene3D G3DSA:3.60.21.10 7 257 1.9E-7 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS25375 747000de16f9135b76768a73fd398fbd 315 SUPERFAMILY SSF56300 9 251 6.03E-20 T 28-03-2018 IPR029052 Metallo-dependent phosphatase-like CI104_RS25090 1376488f30d6fe93273f4d29eca640c4 296 Gene3D G3DSA:3.40.50.2300 27 137 1.1E-26 T 28-03-2018 CI104_RS25090 1376488f30d6fe93273f4d29eca640c4 296 Pfam PF13407 Periplasmic binding protein domain 29 281 2.3E-58 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS25090 1376488f30d6fe93273f4d29eca640c4 296 SUPERFAMILY SSF53822 26 295 1.31E-88 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS25090 1376488f30d6fe93273f4d29eca640c4 296 Gene3D G3DSA:3.40.50.2300 138 293 7.4E-43 T 28-03-2018 CI104_RS06280 071e67b38d7f0ecd27cda2a47c991917 139 SUPERFAMILY SSF48013 3 136 5.49E-42 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CI104_RS06280 071e67b38d7f0ecd27cda2a47c991917 139 Gene3D G3DSA:1.10.940.10 1 138 1.2E-42 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CI104_RS06280 071e67b38d7f0ecd27cda2a47c991917 139 TIGRFAM TIGR01951 nusB: transcription antitermination factor NusB 6 132 2.4E-45 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 CI104_RS06280 071e67b38d7f0ecd27cda2a47c991917 139 Pfam PF01029 NusB family 7 131 7.5E-35 T 28-03-2018 IPR006027 NusB/RsmB/TIM44 GO:0003723|GO:0006355 CI104_RS06280 071e67b38d7f0ecd27cda2a47c991917 139 Hamap MF_00073 N utilization substance protein B homolog [nusB]. 4 135 23.616 T 28-03-2018 IPR011605 NusB antitermination factor GO:0006353 CI104_RS18665 e0957859be590660b29af71342092ce9 317 Pfam PF02653 Branched-chain amino acid transport system / permease component 44 309 1.9E-37 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS18665 e0957859be590660b29af71342092ce9 317 Gene3D G3DSA:1.10.3470.10 16 316 3.0E-24 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS22380 c32e2bd028c8f7bb87ad5d6bb32638fc 323 SUPERFAMILY SSF103481 43 138 6.8E-9 T 28-03-2018 CI104_RS22380 c32e2bd028c8f7bb87ad5d6bb32638fc 323 Pfam PF00892 EamA-like transporter family 3 134 3.9E-16 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS15710 27c93032e7b289c666972d3b390b4b2d 144 Pfam PF12883 Protein of unknown function (DUF3828) 27 141 1.2E-8 T 28-03-2018 IPR024289 Domain of unknown function DUF3828 CI104_RS12520 39cf73de33b430233fa67fcdb5de71fe 193 TIGRFAM TIGR01943 rnfA: electron transport complex, RnfABCDGE type, A subunit 3 191 1.2E-92 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CI104_RS12520 39cf73de33b430233fa67fcdb5de71fe 193 Hamap MF_00459 Electron transport complex subunit RsxA [rsxA]. 2 191 26.619 T 28-03-2018 IPR011293 Electron transport complex, subunit RnfA/RsxA GO:0022900 CI104_RS12520 39cf73de33b430233fa67fcdb5de71fe 193 Pfam PF02508 Rnf-Nqr subunit, membrane protein 5 190 4.3E-61 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CI104_RS12520 39cf73de33b430233fa67fcdb5de71fe 193 PIRSF PIRSF006102 1 193 1.0E-60 T 28-03-2018 IPR003667 Rnf-Nqr subunit, membrane protein GO:0016020 CI104_RS10715 283fb547efc3fc9624c7e4bfd78069f6 116 Pfam PF13272 Putative 2/3 transmembrane domain holin 16 116 4.9E-40 T 28-03-2018 IPR025140 Putative 2/3 transmembrane domain holin CI104_RS06870 3065b0e953bf64b000766cb602043ecb 340 SUPERFAMILY SSF56349 61 314 1.15E-50 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS06870 3065b0e953bf64b000766cb602043ecb 340 Gene3D G3DSA:1.10.150.130 55 163 1.5E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS06870 3065b0e953bf64b000766cb602043ecb 340 Gene3D G3DSA:1.10.443.10 164 318 7.7E-34 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS06870 3065b0e953bf64b000766cb602043ecb 340 Pfam PF00589 Phage integrase family 164 306 3.9E-21 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS23730 5e0df321bb3c2bc07188726e8aad5d7b 66 TIGRFAM TIGR01683 thiS: thiamine biosynthesis protein ThiS 3 66 1.2E-18 T 28-03-2018 IPR010035 ThiS, thiamine-biosynthesis CI104_RS23730 5e0df321bb3c2bc07188726e8aad5d7b 66 Gene3D G3DSA:3.10.20.30 1 66 1.4E-19 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS23730 5e0df321bb3c2bc07188726e8aad5d7b 66 SUPERFAMILY SSF54285 1 66 5.52E-17 T 28-03-2018 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CI104_RS23730 5e0df321bb3c2bc07188726e8aad5d7b 66 Pfam PF02597 ThiS family 3 66 2.5E-13 T 28-03-2018 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 Reactome: R-HSA-947581 CI104_RS04005 ebf163b4e0a55c5f999bbc3d407ffccc 295 SUPERFAMILY SSF53474 69 294 5.88E-49 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS04005 ebf163b4e0a55c5f999bbc3d407ffccc 295 Gene3D G3DSA:3.40.50.1820 67 293 2.8E-38 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS04005 ebf163b4e0a55c5f999bbc3d407ffccc 295 Pfam PF01738 Dienelactone hydrolase family 85 293 2.6E-52 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CI104_RS05130 d798faaddd32eb1b90d98e13e0c20d9c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 58 80 1.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS05130 d798faaddd32eb1b90d98e13e0c20d9c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 139 163 1.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS05130 d798faaddd32eb1b90d98e13e0c20d9c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 176 195 1.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS05130 d798faaddd32eb1b90d98e13e0c20d9c 256 PRINTS PR00164 ABC-2 type transport system membrane protein signature 196 215 1.4E-8 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS05130 d798faaddd32eb1b90d98e13e0c20d9c 256 PIRSF PIRSF006648 11 252 1.8E-22 T 28-03-2018 IPR000412 ABC-2 transporter GO:0006810|GO:0016020 CI104_RS05130 d798faaddd32eb1b90d98e13e0c20d9c 256 Pfam PF01061 ABC-2 type transporter 9 218 1.3E-38 T 28-03-2018 IPR013525 ABC-2 type transporter GO:0016020 Reactome: R-HSA-1369062 CI104_RS09915 ff333715723a675e063442ff2c5c5748 287 Pfam PF04909 Amidohydrolase 5 280 5.0E-37 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS09915 ff333715723a675e063442ff2c5c5748 287 SUPERFAMILY SSF51556 4 280 5.24E-54 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS09915 ff333715723a675e063442ff2c5c5748 287 Gene3D G3DSA:3.20.20.140 1 286 8.4E-37 T 28-03-2018 CI104_RS14740 23be22490859a82f527e210fb9f9a344 141 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 25 136 1.9E-25 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CI104_RS07695 eb77239337441fcb1b91477812e6fc0c 266 Pfam PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase 9 230 7.0E-22 T 28-03-2018 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase GO:0005975 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906 CI104_RS07695 eb77239337441fcb1b91477812e6fc0c 266 SUPERFAMILY SSF100950 1 263 3.68E-106 T 28-03-2018 CI104_RS07695 eb77239337441fcb1b91477812e6fc0c 266 Hamap MF_01241 Glucosamine-6-phosphate deaminase [nagB]. 1 247 41.43 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CI104_RS07695 eb77239337441fcb1b91477812e6fc0c 266 TIGRFAM TIGR00502 nagB: glucosamine-6-phosphate deaminase 1 259 1.3E-143 T 28-03-2018 IPR004547 Glucosamine-6-phosphate isomerase GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CI104_RS07695 eb77239337441fcb1b91477812e6fc0c 266 ProSitePatterns PS01161 Glucosamine/galactosamine-6-phosphate isomerases signature. 125 143 - T 28-03-2018 IPR018321 Glucosamine-6-phosphate isomerase, conserved site GO:0004342|GO:0006044 KEGG: 00520+3.5.99.6|MetaCyc: PWY-5514|MetaCyc: PWY-6855|MetaCyc: PWY-6906|Reactome: R-HSA-70326 CI104_RS07695 eb77239337441fcb1b91477812e6fc0c 266 Gene3D G3DSA:3.40.50.1360 1 266 5.3E-88 T 28-03-2018 CI104_RS09830 8d1ec435d0379681324c68a06aa954f6 130 Gene3D G3DSA:3.10.180.10 1 129 9.4E-16 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS09830 8d1ec435d0379681324c68a06aa954f6 130 SUPERFAMILY SSF54593 2 127 3.24E-20 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS08050 baef3cd07e5c33d7914938b4c0fcc416 97 TIGRFAM TIGR02112 cyd_oper_ybgE: cyd operon protein YbgE 5 97 5.5E-40 T 28-03-2018 IPR011846 Cyd operon protein YbgE CI104_RS08050 baef3cd07e5c33d7914938b4c0fcc416 97 Pfam PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) 17 95 2.6E-33 T 28-03-2018 IPR011846 Cyd operon protein YbgE CI104_RS10140 4dfae1d286cde710df42c0cd7b465058 235 Gene3D G3DSA:1.10.10.10 7 186 6.2E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10140 4dfae1d286cde710df42c0cd7b465058 235 Pfam PF01022 Bacterial regulatory protein, arsR family 26 71 2.3E-7 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS10140 4dfae1d286cde710df42c0cd7b465058 235 SMART SM00418 19 98 1.2E-11 T 28-03-2018 IPR001845 HTH ArsR-type DNA-binding domain GO:0003700|GO:0006355 CI104_RS10140 4dfae1d286cde710df42c0cd7b465058 235 SUPERFAMILY SSF46785 12 98 8.33E-17 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 Pfam PF01491 Frataxin-like domain 1 103 6.3E-30 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 ProSitePatterns PS01344 Frataxin family signature. 50 64 - T 28-03-2018 IPR020895 Frataxin conserved site Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 Hamap MF_00142 Protein CyaY [cyaY]. 1 105 29.087 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 SMART SM01219 1 106 4.8E-56 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 Gene3D G3DSA:3.30.920.10 1 106 1.9E-34 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 TIGRFAM TIGR03421 FeS_CyaY: iron donor protein CyaY 2 105 2.3E-43 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS24815 9f0c7ade3ac7e394ec36dc95436b2bbd 106 SUPERFAMILY SSF55387 1 105 5.06E-40 T 28-03-2018 IPR002908 Frataxin/CyaY GO:0008199|GO:0016226 Reactome: R-HSA-1268020|Reactome: R-HSA-1362409 CI104_RS23725 9d18e5d151ace2b5aa4df8830f5e6839 252 SUPERFAMILY SSF69572 2 246 2.35E-79 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CI104_RS23725 9d18e5d151ace2b5aa4df8830f5e6839 252 Gene3D G3DSA:3.40.50.720 1 245 2.2E-69 T 28-03-2018 CI104_RS23725 9d18e5d151ace2b5aa4df8830f5e6839 252 Pfam PF00899 ThiF family 9 240 1.9E-62 T 28-03-2018 IPR000594 THIF-type NAD/FAD binding fold GO:0008641 CI104_RS01410 610018256895ec2f326068bbd7199145 352 TIGRFAM TIGR00439 ftsX: putative protein insertion permease FtsX 46 351 5.3E-157 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CI104_RS01410 610018256895ec2f326068bbd7199145 352 PIRSF PIRSF003097 50 348 1.8E-107 T 28-03-2018 IPR004513 Cell division protein FtsX GO:0007049|GO:0016021 CI104_RS20380 7dc0591587c103f8a9bd1b3cbb8c9c76 237 Pfam PF03741 Integral membrane protein TerC family 17 203 1.3E-51 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CI104_RS12965 36741305b986805fc7a6f6cdfc5a1b15 92 Gene3D G3DSA:1.20.5.780 6 87 1.1E-23 T 28-03-2018 CI104_RS12965 36741305b986805fc7a6f6cdfc5a1b15 92 SUPERFAMILY SSF47598 6 77 7.78E-19 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS12965 36741305b986805fc7a6f6cdfc5a1b15 92 Pfam PF08681 Protein of unknown function (DUF1778) 10 87 1.7E-20 T 28-03-2018 IPR014795 Vibrio phage ICP1, Orf50 CI104_RS14290 0b5546f98277a654339abe351cebc7ef 215 TIGRFAM TIGR00427 TIGR00427: membrane protein, MarC family 8 206 8.0E-83 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CI104_RS14290 0b5546f98277a654339abe351cebc7ef 215 Pfam PF01914 MarC family integral membrane protein 9 210 1.6E-73 T 28-03-2018 IPR002771 Multiple antibiotic resistance (MarC)-related GO:0016021 CI104_RS00295 b7bfd629417d236d1415bcac6eed1bce 141 SUPERFAMILY SSF53062 9 129 2.09E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS00295 b7bfd629417d236d1415bcac6eed1bce 141 Pfam PF03610 PTS system fructose IIA component 10 118 8.8E-15 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS00295 b7bfd629417d236d1415bcac6eed1bce 141 Gene3D G3DSA:3.40.50.510 2 141 2.7E-24 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS03385 9cd19343e74310819b32844d03489ff8 112 SUPERFAMILY SSF140670 11 107 6.15E-49 T 28-03-2018 CI104_RS03385 9cd19343e74310819b32844d03489ff8 112 Pfam PF08986 Domain of unknown function (DUF1889) 1 107 7.6E-52 T 28-03-2018 IPR015079 Protein of unknown function DUF1889 CI104_RS00850 da54d5dbc943809ad472c2932869d98b 331 Hamap MF_01949 O-acetyltransferase WecH [wecH]. 1 331 38.105 T 28-03-2018 IPR032905 O-acetyltransferase WecH GO:0009246|GO:0016413 CI104_RS00850 da54d5dbc943809ad472c2932869d98b 331 Pfam PF01757 Acyltransferase family 6 321 3.0E-31 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 TIGRFAM TIGR01479 GMP_PMI: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 6 477 4.5E-243 T 28-03-2018 IPR006375 Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase GO:0000271|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 Pfam PF01050 Mannose-6-phosphate isomerase 323 473 1.2E-74 T 28-03-2018 IPR001538 Mannose-6-phosphate isomerase, type II, C-terminal GO:0005976|GO:0016779 KEGG: 00051+2.7.7.13|KEGG: 00520+2.7.7.13|MetaCyc: PWY-5659|MetaCyc: PWY-882 CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 SUPERFAMILY SSF51182 193 477 5.82E-88 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 SUPERFAMILY SSF53448 6 290 4.46E-74 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 Gene3D G3DSA:2.60.120.10 346 455 1.5E-29 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 Pfam PF00483 Nucleotidyl transferase 8 295 8.5E-79 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CI104_RS16495 58bcdc9aba8f29b64ae344a8b198e2b5 478 Gene3D G3DSA:3.90.550.10 6 345 3.3E-95 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS14005 86120de86687f7477cde91d7abcfba0a 321 SUPERFAMILY SSF161098 70 138 4.97E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14005 86120de86687f7477cde91d7abcfba0a 321 SUPERFAMILY SSF161098 178 300 4.97E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14005 86120de86687f7477cde91d7abcfba0a 321 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 92 311 2.6E-44 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14005 86120de86687f7477cde91d7abcfba0a 321 Gene3D G3DSA:1.10.3720.10 4 303 1.6E-42 T 28-03-2018 CI104_RS04760 3c038ba5a9705a74e8789b7b894da812 231 Pfam PF00596 Class II Aldolase and Adducin N-terminal domain 8 196 1.1E-47 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS04760 3c038ba5a9705a74e8789b7b894da812 231 Hamap MF_00989 L-ribulose-5-phosphate 4-epimerase [araD]. 1 231 75.585 T 28-03-2018 IPR033748 L-ribulose-5-phosphate 4-epimerase AraD GO:0008742|GO:0019569 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CI104_RS04760 3c038ba5a9705a74e8789b7b894da812 231 TIGRFAM TIGR00760 araD: L-ribulose-5-phosphate 4-epimerase 1 231 7.7E-134 T 28-03-2018 IPR004661 L-ribulose-5-phosphate 4-epimerase GO:0008270|GO:0008742|GO:0019572 KEGG: 00040+5.1.3.4|KEGG: 00053+5.1.3.4|MetaCyc: PWY-6961 CI104_RS04760 3c038ba5a9705a74e8789b7b894da812 231 SMART SM01007 7 198 4.2E-70 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS04760 3c038ba5a9705a74e8789b7b894da812 231 SUPERFAMILY SSF53639 1 223 5.89E-70 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS04760 3c038ba5a9705a74e8789b7b894da812 231 Gene3D G3DSA:3.40.225.10 1 231 4.2E-60 T 28-03-2018 IPR001303 Class II aldolase/adducin N-terminal CI104_RS16125 c902f8012a3d0bf0bf9c115fc86affae 261 Gene3D G3DSA:3.40.50.2300 70 261 1.1E-11 T 28-03-2018 CI104_RS16125 c902f8012a3d0bf0bf9c115fc86affae 261 Pfam PF02571 Precorrin-6x reductase CbiJ/CobK 6 242 2.2E-72 T 28-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CI104_RS16125 c902f8012a3d0bf0bf9c115fc86affae 261 TIGRFAM TIGR00715 precor6x_red: precorrin-6x reductase 5 235 6.4E-51 T 28-03-2018 IPR003723 Precorrin-6x reductase GO:0009236|GO:0016994|GO:0055114 CI104_RS26430 09b9b200a1d3ef68f64ec1cd1913fcba 895 Gene3D G3DSA:3.20.20.140 8 242 4.6E-16 T 28-03-2018 CI104_RS26430 09b9b200a1d3ef68f64ec1cd1913fcba 895 Gene3D G3DSA:3.40.50.300 274 861 1.9E-21 T 28-03-2018 CI104_RS26430 09b9b200a1d3ef68f64ec1cd1913fcba 895 SUPERFAMILY SSF89550 129 245 9.42E-24 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS26430 09b9b200a1d3ef68f64ec1cd1913fcba 895 SUPERFAMILY SSF89550 6 102 9.42E-24 T 28-03-2018 IPR016195 Polymerase/histidinol phosphatase-like GO:0003824 Reactome: R-HSA-6784531|Reactome: R-HSA-6791226 CI104_RS26430 09b9b200a1d3ef68f64ec1cd1913fcba 895 SUPERFAMILY SSF52540 278 453 1.77E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26430 09b9b200a1d3ef68f64ec1cd1913fcba 895 SUPERFAMILY SSF52540 764 852 1.77E-19 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS03255 5a63d88f29c03167e9b79590525fd02e 470 Gene3D G3DSA:3.20.20.140 89 467 2.8E-155 T 28-03-2018 CI104_RS03255 5a63d88f29c03167e9b79590525fd02e 470 SUPERFAMILY SSF51556 3 465 1.39E-183 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS03255 5a63d88f29c03167e9b79590525fd02e 470 Pfam PF02614 Glucuronate isomerase 1 465 4.7E-231 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CI104_RS03255 5a63d88f29c03167e9b79590525fd02e 470 Hamap MF_00675 Uronate isomerase [uxaC]. 2 467 50.467 T 28-03-2018 IPR003766 Uronate isomerase GO:0006064|GO:0008880 KEGG: 00040+5.3.1.12|MetaCyc: PWY-7247|MetaCyc: PWY-7248 CI104_RS03255 5a63d88f29c03167e9b79590525fd02e 470 Gene3D G3DSA:3.20.20.140 3 88 3.4E-28 T 28-03-2018 CI104_RS18300 3f6f83abc4a662032647d27d68fe1764 159 TIGRFAM TIGR02528 EutP: ethanolamine utilization protein, EutP 2 143 3.0E-54 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CI104_RS18300 3f6f83abc4a662032647d27d68fe1764 159 SUPERFAMILY SSF52540 3 147 7.53E-17 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS18300 3f6f83abc4a662032647d27d68fe1764 159 Gene3D G3DSA:3.40.50.300 2 157 1.1E-16 T 28-03-2018 CI104_RS18300 3f6f83abc4a662032647d27d68fe1764 159 Pfam PF10662 Ethanolamine utilisation - propanediol utilisation 1 143 8.6E-30 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CI104_RS18300 3f6f83abc4a662032647d27d68fe1764 159 PIRSF PIRSF036409 1 148 6.2E-56 T 28-03-2018 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV GO:0005524|GO:0006576 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 SUPERFAMILY SSF58104 232 513 1.44E-66 T 28-03-2018 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 SMART SM00283 265 512 5.2E-73 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 392 421 2.1E-55 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 363 390 2.1E-55 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 6 31 2.1E-55 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 440 469 2.1E-55 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 PRINTS PR00260 Bacterial chemotaxis sensory transducer signature 286 315 2.1E-55 T 28-03-2018 IPR004090 Chemotaxis methyl-accepting receptor GO:0004871|GO:0006935|GO:0007165|GO:0016020 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 Gene3D G3DSA:1.10.287.950 319 516 6.5E-45 T 28-03-2018 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 Gene3D G3DSA:1.10.287.950 72 318 7.1E-17 T 28-03-2018 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 Pfam PF12729 Four helix bundle sensory module for signal transduction 5 170 2.1E-17 T 28-03-2018 IPR024478 Chemotaxis methyl-accepting receptor HlyB-like, 4HB MCP domain CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 SMART SM00304 212 264 4.0E-8 T 28-03-2018 IPR003660 HAMP domain GO:0004871|GO:0007165|GO:0016021 CI104_RS03370 0ef15b87b84f59c9a9a89da9d39c87f9 521 Pfam PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain 328 478 7.1E-43 T 28-03-2018 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain GO:0004871|GO:0007165|GO:0016020 CI104_RS20255 4fc64ea71e47b39ac5b7c1ed052a3637 75 Pfam PF06004 Bacterial protein of unknown function (DUF903) 24 72 1.4E-24 T 28-03-2018 IPR010305 Protein of unknown function DUF903 CI104_RS20255 4fc64ea71e47b39ac5b7c1ed052a3637 75 SUPERFAMILY SSF50182 23 73 6.0E-19 T 28-03-2018 IPR010920 LSM domain CI104_RS20255 4fc64ea71e47b39ac5b7c1ed052a3637 75 Gene3D G3DSA:2.30.30.100 22 73 6.5E-32 T 28-03-2018 CI104_RS17130 2149bd8ddad67e75e91a44521b6bc2c6 70 TIGRFAM TIGR03141 cytochro_ccmD: heme exporter protein CcmD 12 58 1.8E-20 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CI104_RS17130 2149bd8ddad67e75e91a44521b6bc2c6 70 Pfam PF04995 Heme exporter protein D (CcmD) 15 58 1.7E-17 T 28-03-2018 IPR007078 Haem exporter protein D (CcmD) GO:0015886|GO:0016021|GO:0017004 CI104_RS22265 879e5714858ac61cb6117119993945f6 341 Gene3D G3DSA:1.10.3470.10 53 327 6.2E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS22265 879e5714858ac61cb6117119993945f6 341 Pfam PF02653 Branched-chain amino acid transport system / permease component 57 321 1.2E-48 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS22555 2efa18aa937f1efcf010397eb34e4cc6 153 Gene3D G3DSA:3.40.50.300 1 153 3.1E-52 T 28-03-2018 CI104_RS22555 2efa18aa937f1efcf010397eb34e4cc6 153 SUPERFAMILY SSF52540 29 133 1.55E-24 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS22555 2efa18aa937f1efcf010397eb34e4cc6 153 Pfam PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE 9 133 2.5E-42 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CI104_RS22555 2efa18aa937f1efcf010397eb34e4cc6 153 TIGRFAM TIGR00150 T6A_YjeE: tRNA threonylcarbamoyl adenosine modification protein YjeE 8 140 1.4E-58 T 28-03-2018 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE GO:0002949 CI104_RS13640 7c0477fac50721d1a8a0666984bb83ba 201 SUPERFAMILY SSF52218 1 199 9.56E-58 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS13640 7c0477fac50721d1a8a0666984bb83ba 201 Gene3D G3DSA:3.40.50.360 2 201 3.6E-39 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS13640 7c0477fac50721d1a8a0666984bb83ba 201 Pfam PF02525 Flavodoxin-like fold 3 195 1.7E-45 T 28-03-2018 IPR003680 Flavodoxin-like fold CI104_RS13640 7c0477fac50721d1a8a0666984bb83ba 201 Hamap MF_01216 FMN-dependent NADH-azoreductase [azoR]. 2 199 32.618 T 28-03-2018 IPR023048 NADH-azoreductase, FMN-dependent GO:0016661|GO:0055114 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 Gene3D G3DSA:3.40.605.10 238 417 2.4E-38 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 PIRSF PIRSF000151 1 417 6.5E-176 T 28-03-2018 IPR012134 Glutamate-5-semialdehyde dehydrogenase GO:0004350|GO:0006561|GO:0050661|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 Pfam PF00171 Aldehyde dehydrogenase family 8 285 4.4E-16 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 ProSitePatterns PS01223 Gamma-glutamyl phosphate reductase signature. 323 344 - T 28-03-2018 IPR020593 Gamma-glutamyl phosphate reductase GPR, conserved site GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 SUPERFAMILY SSF53720 3 415 1.05E-113 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 TIGRFAM TIGR00407 proA: glutamate-5-semialdehyde dehydrogenase 9 406 2.1E-193 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 Hamap MF_00412 Gamma-glutamyl phosphate reductase [proA]. 1 416 41.376 T 28-03-2018 IPR000965 GPR domain GO:0004350|GO:0006561|GO:0055114 KEGG: 00330+1.2.1.41|KEGG: 00332+1.2.1.41|MetaCyc: PWY-3341|MetaCyc: PWY-6922|Reactome: R-HSA-70614 CI104_RS05785 2025133a6a83750f1ddf0b89ebb6214f 417 Gene3D G3DSA:3.40.605.10 2 237 9.0E-43 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS15090 c74fa2a042c3c5d38c3b9e7d3668cc22 60 Hamap MF_00507 UPF0181 protein YoaH [yoaH]. 1 58 20.239 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 CI104_RS15090 c74fa2a042c3c5d38c3b9e7d3668cc22 60 Pfam PF03701 Uncharacterised protein family (UPF0181) 1 49 1.7E-27 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 CI104_RS15090 c74fa2a042c3c5d38c3b9e7d3668cc22 60 ProDom PD026807 UPF0181 YOAH YPTB1650 VV20310 VPA0916 VCA0569 YPO1774/Y2534/YP1619 PLU2693 VVA0806 PM0480 1 48 4.0E-18 T 28-03-2018 IPR005371 Uncharacterised protein family UPF0181 CI104_RS19280 96a015f11b7b1bdd9ea546ec98f85872 73 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 13 68 1.1E-18 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CI104_RS19280 96a015f11b7b1bdd9ea546ec98f85872 73 Gene3D G3DSA:1.10.10.10 14 73 1.6E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS13165 cd58e19da6c625aec49d597abafbda66 146 Pfam PF04828 Glutathione-dependent formaldehyde-activating enzyme 25 114 1.8E-9 T 28-03-2018 IPR006913 Glutathione-dependent formaldehyde-activating enzyme/centromere protein V GO:0008152|GO:0016846 KEGG: 00680+4.4.1.22|MetaCyc: PWY-1801 CI104_RS13165 cd58e19da6c625aec49d597abafbda66 146 Gene3D G3DSA:3.90.1590.10 1 142 1.4E-22 T 28-03-2018 CI104_RS13165 cd58e19da6c625aec49d597abafbda66 146 SUPERFAMILY SSF51316 3 129 3.24E-27 T 28-03-2018 IPR011057 Mss4-like CI104_RS15640 5ad4065ce5dc19f28edba5834cd451a8 79 TIGRFAM TIGR03853 matur_matur: putative metal-binding protein 3 79 7.8E-35 T 28-03-2018 IPR019620 Putative metal-binding protein CI104_RS15640 5ad4065ce5dc19f28edba5834cd451a8 79 Pfam PF10678 Protein of unknown function (DUF2492) 3 78 3.1E-35 T 28-03-2018 IPR019620 Putative metal-binding protein CI104_RS13425 76bd7d17a3894bfe52031639f07f0144 63 SUPERFAMILY SSF54786 2 59 2.71E-10 T 28-03-2018 CI104_RS13425 76bd7d17a3894bfe52031639f07f0144 63 Pfam PF07927 HicA toxin of bacterial toxin-antitoxin, 5 57 6.6E-10 T 28-03-2018 IPR012933 HicA mRNA interferase family GO:0003729 CI104_RS13425 76bd7d17a3894bfe52031639f07f0144 63 Gene3D G3DSA:3.30.920.30 1 63 6.8E-11 T 28-03-2018 CI104_RS01115 2b90cc4077f9871295028f89b31d70de 342 Pfam PF03631 Virulence factor BrkB 71 330 1.9E-49 T 28-03-2018 IPR017039 Virulence factor BrkB CI104_RS01115 2b90cc4077f9871295028f89b31d70de 342 PIRSF PIRSF035875 44 333 1.7E-23 T 28-03-2018 IPR017039 Virulence factor BrkB CI104_RS01115 2b90cc4077f9871295028f89b31d70de 342 TIGRFAM TIGR00766 TIGR00766: inner membrane protein YhjD 57 331 8.4E-129 T 28-03-2018 IPR005274 Inner membrane protein YhjD CI104_RS02590 7b4b7906cf8717b82140d0d714d5148f 166 Pfam PF04386 Stringent starvation protein B 9 166 2.3E-44 T 28-03-2018 IPR007481 Stringent starvation protein B CI104_RS02590 7b4b7906cf8717b82140d0d714d5148f 166 SUPERFAMILY SSF101738 4 112 3.14E-48 T 28-03-2018 IPR007481 Stringent starvation protein B CI104_RS02590 7b4b7906cf8717b82140d0d714d5148f 166 Gene3D G3DSA:2.30.30.220 10 107 8.1E-42 T 28-03-2018 IPR007481 Stringent starvation protein B CI104_RS02590 7b4b7906cf8717b82140d0d714d5148f 166 PIRSF PIRSF005276 3 166 5.1E-60 T 28-03-2018 IPR007481 Stringent starvation protein B CI104_RS15805 02764ee57a3f4b1ce8fc150522bdeda8 469 Pfam PF02465 Flagellar hook-associated protein 2 N-terminus 11 106 9.9E-19 T 28-03-2018 IPR003481 Flagellar hook-associated protein 2, N-terminal GO:0009424 CI104_RS15805 02764ee57a3f4b1ce8fc150522bdeda8 469 Pfam PF07195 Flagellar hook-associated protein 2 C-terminus 225 454 5.6E-59 T 28-03-2018 IPR010809 Flagellar hook-associated 2, C-terminal GO:0007155|GO:0009288 CI104_RS22015 6f32219153508e11cddff8bf554de4e1 254 SUPERFAMILY SSF47240 7 57 1.51E-72 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS22015 6f32219153508e11cddff8bf554de4e1 254 SUPERFAMILY SSF47240 105 252 1.51E-72 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS22015 6f32219153508e11cddff8bf554de4e1 254 Gene3D G3DSA:1.20.1260.10 3 254 5.1E-71 T 28-03-2018 IPR012347 Ferritin-related CI104_RS22015 6f32219153508e11cddff8bf554de4e1 254 Pfam PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) 5 248 2.8E-120 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CI104_RS22015 6f32219153508e11cddff8bf554de4e1 254 PIRSF PIRSF020736 1 253 4.2E-92 T 28-03-2018 IPR010386 tRNA-hydroxylase MiaE GO:0006400|GO:0045301 CI104_RS17760 cc1347454754030e06df151596e64d51 124 Gene3D G3DSA:1.10.10.10 3 69 8.5E-16 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS17760 cc1347454754030e06df151596e64d51 124 SUPERFAMILY SSF46955 3 67 2.11E-11 T 28-03-2018 IPR009061 Putative DNA-binding domain CI104_RS17760 cc1347454754030e06df151596e64d51 124 Pfam PF02316 Mu DNA-binding domain 10 120 2.8E-6 T 28-03-2018 IPR003314 Mu-type HTH domain GO:0003677 CI104_RS16325 ed69a0b64b971a833f032f6d46061a30 455 Pfam PF13520 Amino acid permease 51 410 9.6E-35 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS16325 ed69a0b64b971a833f032f6d46061a30 455 PIRSF PIRSF006060 3 449 3.8E-70 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS20010 9608edeadde371c0ce141b9ef0efd618 121 TIGRFAM TIGR03367 queuosine_QueD: queuosine biosynthesis protein QueD 6 97 9.0E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS20010 9608edeadde371c0ce141b9ef0efd618 121 Pfam PF01242 6-pyruvoyl tetrahydropterin synthase 7 121 4.3E-33 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS20010 9608edeadde371c0ce141b9ef0efd618 121 Gene3D G3DSA:3.30.479.10 1 121 6.4E-39 T 28-03-2018 CI104_RS20010 9608edeadde371c0ce141b9ef0efd618 121 TIGRFAM TIGR00039 6PTHBS: 6-pyruvoyl tetrahydropterin synthase/QueD family protein 4 121 3.1E-37 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS20010 9608edeadde371c0ce141b9ef0efd618 121 PIRSF PIRSF006113 1 121 2.4E-55 T 28-03-2018 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein Reactome: R-HSA-1474151 CI104_RS20010 9608edeadde371c0ce141b9ef0efd618 121 SUPERFAMILY SSF55620 1 120 1.17E-40 T 28-03-2018 CI104_RS03955 1f3a39f821aa9ca84dd871a28b5a1bcf 219 Pfam PF09335 SNARE associated Golgi protein 48 173 8.1E-18 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS28690 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 SUPERFAMILY SSF89447 3 68 2.35E-12 T 28-03-2018 CI104_RS28690 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 Gene3D G3DSA:2.10.260.10 1 74 6.7E-11 T 28-03-2018 CI104_RS28690 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 SMART SM00966 7 48 2.1E-5 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CI104_RS28690 ba9132e8ce39dabfeb65a28d6ff2b5e5 76 Pfam PF04014 Antidote-toxin recognition MazE, bacterial antitoxin 7 47 4.4E-10 T 28-03-2018 IPR007159 SpoVT-AbrB domain GO:0003677 CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 Gene3D G3DSA:3.20.20.120 141 413 5.6E-48 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 Gene3D G3DSA:3.30.390.10 1 140 6.8E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 SUPERFAMILY SSF51604 139 415 5.13E-81 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 TIGRFAM TIGR03247 glucar-dehydr: glucarate dehydratase 6 446 6.6E-271 T 28-03-2018 IPR017653 Glucarate dehydratase GO:0000287|GO:0008872|GO:0019394 KEGG: 00053+4.2.1.40|MetaCyc: PWY-6499 CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 SMART SM00922 185 285 1.2E-15 T 28-03-2018 IPR013342 Mandelate racemase/muconate lactonizing enzyme, C-terminal CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 SUPERFAMILY SSF54826 8 137 4.07E-30 T 28-03-2018 IPR029017 Enolase N-terminal domain-like KEGG: 00010+4.2.1.11|KEGG: 00680+4.2.1.11|MetaCyc: PWY-1042|MetaCyc: PWY-1622|MetaCyc: PWY-2221|MetaCyc: PWY-5484|MetaCyc: PWY-5723|MetaCyc: PWY-6142|MetaCyc: PWY-6886|MetaCyc: PWY-6901|MetaCyc: PWY-7003|MetaCyc: PWY-7124|MetaCyc: PWY-7218 CI104_RS20070 57a85fca43abce1e42cbc73fd37b3de6 446 Pfam PF13378 Enolase C-terminal domain-like 189 405 7.5E-37 T 28-03-2018 IPR029065 Enolase C-terminal domain-like CI104_RS19835 30f69c56f98600ed9c800bd87a5c1e3b 153 Pfam PF11046 Transcriptional repressor of hyc and hyp operons 1 145 3.7E-72 T 28-03-2018 IPR021285 Transcription regulator, HycA CI104_RS16855 eb9ed9fb6327e2ea4f29126b7ff40f07 79 ProDom PD058881 MEMBRANE TRANSMEMBRANE YEIS INNER 1 79 6.0E-10 T 28-03-2018 IPR020155 Uncharacterised protein family YeiS GO:0016021 CI104_RS16855 eb9ed9fb6327e2ea4f29126b7ff40f07 79 Pfam PF10808 Protein of unknown function (DUF2542) 1 78 3.3E-21 T 28-03-2018 IPR020155 Uncharacterised protein family YeiS GO:0016021 CI104_RS17625 e5feb255255339051d147bebdec1ee95 147 SUPERFAMILY SSF55804 2 145 1.83E-36 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS17625 e5feb255255339051d147bebdec1ee95 147 ProSitePatterns PS00372 PTS EIIA domains phosphorylation site signature 2. 51 67 - T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS17625 e5feb255255339051d147bebdec1ee95 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 6 145 1.8E-34 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS17625 e5feb255255339051d147bebdec1ee95 147 Gene3D G3DSA:3.40.930.10 1 146 3.0E-34 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS25745 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.30.200.20 10 83 9.9E-18 T 28-03-2018 CI104_RS25745 da81481e9e9010a583019d7e5b20aefd 267 Pfam PF01636 Phosphotransferase enzyme family 17 258 1.2E-29 T 28-03-2018 IPR002575 Aminoglycoside phosphotransferase CI104_RS25745 da81481e9e9010a583019d7e5b20aefd 267 PIRSF PIRSF000706 2 265 1.1E-80 T 28-03-2018 IPR024165 Aminoglycoside 3-phosphotransferase GO:0005524|GO:0016773|GO:0046677 CI104_RS25745 da81481e9e9010a583019d7e5b20aefd 267 Gene3D G3DSA:3.90.1200.10 88 265 2.4E-19 T 28-03-2018 CI104_RS25745 da81481e9e9010a583019d7e5b20aefd 267 SUPERFAMILY SSF56112 6 263 1.9E-42 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS13715 3c0df6f181e2d6603e0c2061bd2ab2df 90 Pfam PF03891 Domain of unknown function (DUF333) 40 85 1.9E-15 T 28-03-2018 IPR005590 Protein of unknown function DUF333 CI104_RS05830 3e3c777e7e5c59263b492c453de7ada2 308 SUPERFAMILY SSF53590 1 307 2.75E-81 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS05830 3e3c777e7e5c59263b492c453de7ada2 308 ProSitePatterns PS01247 Inosine-uridine preferring nucleoside hydrolase family signature. 7 17 - T 28-03-2018 IPR015910 Inosine/uridine-preferring nucleoside hydrolase, conserved site GO:0016799 CI104_RS05830 3e3c777e7e5c59263b492c453de7ada2 308 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 300 1.2E-69 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS05830 3e3c777e7e5c59263b492c453de7ada2 308 Gene3D G3DSA:3.90.245.10 1 308 5.7E-79 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS02510 86b02c3806861da70dc59fa25bdc05e3 310 Gene3D G3DSA:1.20.1600.10 39 287 4.6E-18 T 28-03-2018 CI104_RS02510 86b02c3806861da70dc59fa25bdc05e3 310 Pfam PF13533 Biotin-lipoyl like 47 95 3.1E-18 T 28-03-2018 CI104_RS02510 86b02c3806861da70dc59fa25bdc05e3 310 SUPERFAMILY SSF111369 46 215 3.27E-22 T 28-03-2018 CI104_RS02510 86b02c3806861da70dc59fa25bdc05e3 310 Hamap MF_01544 p-hydroxybenzoic acid efflux pump subunit AaeA [aaeA]. 1 310 60.195 T 28-03-2018 IPR022871 Para-hydroxybenzoic acid efflux pump, subunit AaeA CI104_RS02510 86b02c3806861da70dc59fa25bdc05e3 310 Pfam PF13437 HlyD family secretion protein 156 238 2.6E-9 T 28-03-2018 CI104_RS02510 86b02c3806861da70dc59fa25bdc05e3 310 TIGRFAM TIGR01730 RND_mfp: efflux transporter, RND family, MFP subunit 46 240 4.6E-33 T 28-03-2018 IPR006143 RND efflux pump, membrane fusion protein GO:0005215|GO:0016020|GO:0055085 CI104_RS25345 0e4bacc619d7cf13b793097b62aac3b9 893 Gene3D G3DSA:3.40.50.300 367 877 3.8E-14 T 28-03-2018 CI104_RS25345 0e4bacc619d7cf13b793097b62aac3b9 893 SUPERFAMILY SSF52540 510 556 8.21E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25345 0e4bacc619d7cf13b793097b62aac3b9 893 SUPERFAMILY SSF52540 421 481 8.21E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25345 0e4bacc619d7cf13b793097b62aac3b9 893 SUPERFAMILY SSF52540 584 802 8.21E-26 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS25345 0e4bacc619d7cf13b793097b62aac3b9 893 Pfam PF11130 F pilus assembly Type-IV secretion system for plasmid transfer 19 258 2.6E-23 T 28-03-2018 IPR025955 Type-IV secretion system protein TraC/Conjugative transfer ATPase CI104_RS06820 0826b0cb606e2bea6dc7af97054110c8 353 PIRSF PIRSF018494 1 346 1.5E-141 T 28-03-2018 IPR030935 Phage portal protein PBSX family, Proteobacteria CI104_RS06820 0826b0cb606e2bea6dc7af97054110c8 353 Pfam PF04860 Phage portal protein 101 342 3.3E-14 T 28-03-2018 IPR006944 Bacteriophage/Gene transfer agent portal protein CI104_RS06820 0826b0cb606e2bea6dc7af97054110c8 353 TIGRFAM TIGR01540 portal_PBSX: phage portal protein, PBSX family 60 329 1.0E-66 T 28-03-2018 IPR006430 Phage portal protein PBSX family CI104_RS06665 c8742a93fd48f39eceeceed1cf8cf5a2 434 ProSitePatterns PS00584 pfkB family of carbohydrate kinases signature 2. 352 365 - T 28-03-2018 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site GO:0016773 CI104_RS06665 c8742a93fd48f39eceeceed1cf8cf5a2 434 SUPERFAMILY SSF53613 36 305 3.59E-45 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS06665 c8742a93fd48f39eceeceed1cf8cf5a2 434 SUPERFAMILY SSF53613 338 416 3.59E-45 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS06665 c8742a93fd48f39eceeceed1cf8cf5a2 434 Pfam PF00294 pfkB family carbohydrate kinase 138 294 2.0E-9 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS06665 c8742a93fd48f39eceeceed1cf8cf5a2 434 Gene3D G3DSA:3.40.1190.20 32 431 1.7E-41 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 Pfam PF07729 FCD domain 99 226 1.5E-17 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 Pfam PF00392 Bacterial regulatory proteins, gntR family 12 74 1.5E-25 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 Gene3D G3DSA:1.10.10.10 2 76 5.2E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 34 48 2.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 PRINTS PR00035 GntR bacterial regulatory protein HTH signature 48 64 2.9E-11 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 SUPERFAMILY SSF46785 6 76 4.28E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 SUPERFAMILY SSF48008 95 234 3.66E-20 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 SMART SM00345 15 74 3.0E-29 T 28-03-2018 IPR000524 Transcription regulator HTH, GntR GO:0003700|GO:0006355 CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 SMART SM00895 99 227 1.9E-16 T 28-03-2018 IPR011711 GntR, C-terminal CI104_RS05005 ac433551fd823fa0d8327190561785c9 254 Gene3D G3DSA:1.20.120.530 79 245 1.9E-22 T 28-03-2018 IPR008920 Transcription regulator FadR/GntR, C-terminal CI104_RS00880 006537cab9bf75e53320a7368dbeaa9f 96 SUPERFAMILY SSF47413 39 82 2.25E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS00880 006537cab9bf75e53320a7368dbeaa9f 96 Gene3D G3DSA:1.10.260.40 18 86 4.0E-8 T 28-03-2018 CI104_RS16545 3005e3d9c0d2133e6cf906c588096c81 280 Gene3D G3DSA:3.90.550.10 2 267 1.4E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16545 3005e3d9c0d2133e6cf906c588096c81 280 SUPERFAMILY SSF53448 6 234 7.78E-41 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS16545 3005e3d9c0d2133e6cf906c588096c81 280 Pfam PF00535 Glycosyl transferase family 2 9 138 3.0E-27 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS16545 3005e3d9c0d2133e6cf906c588096c81 280 TIGRFAM TIGR04017 WcaA: colanic acid biosynthesis glycosyltransferase WcaA 3 280 3.4E-195 T 28-03-2018 IPR024009 Colanic acid biosynthesis, glycosyl transferase, WcaA CI104_RS12870 9a68271aeb164c08919ea83d887ac87e 72 Pfam PF13999 MarB protein 6 70 9.5E-34 T 28-03-2018 IPR025732 MarB protein CI104_RS12870 9a68271aeb164c08919ea83d887ac87e 72 ProDom PD027692 ANTIBIOTIC RESISTANCE MULTIPLE MARB 17 72 3.0E-16 T 28-03-2018 IPR025732 MarB protein CI104_RS27625 b785530503c8f19a13f17d1baefae069 92 Pfam PF10723 Replication regulatory protein RepB 1 81 3.7E-38 T 28-03-2018 IPR019661 Replication regulatory protein RepA2 GO:0006276 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 TIGRFAM TIGR00858 bioF: 8-amino-7-oxononanoate synthase 20 381 8.8E-143 T 28-03-2018 IPR004723 8-amino-7-oxononanoate synthase, Archaea/Proteobacteria type GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 Gene3D G3DSA:3.40.640.10 57 270 6.5E-45 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 Pfam PF00155 Aminotransferase class I and II 41 380 2.6E-62 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 ProSitePatterns PS00599 Aminotransferases class-II pyridoxal-phosphate attachment site. 233 242 - T 28-03-2018 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site GO:0008152|GO:0016740 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 Gene3D G3DSA:3.90.1150.10 271 384 1.1E-33 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 Hamap MF_01693 8-amino-7-oxononanoate synthase [bioF]. 3 384 48.792 T 28-03-2018 IPR022834 8-amino-7-oxononanoate synthase, Proteobacteria GO:0008710|GO:0009102 KEGG: 00780+2.3.1.47|MetaCyc: PWY-6519|MetaCyc: PWY-6578|MetaCyc: PWY-7147 CI104_RS08275 0b1c12df3c74b32b423e75af966ea770 385 SUPERFAMILY SSF53383 3 380 1.08E-107 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS14225 22eed8c490e28ef0f36ef7e8bfd29168 132 SUPERFAMILY SSF54637 8 131 2.14E-38 T 28-03-2018 IPR029069 HotDog domain CI104_RS14225 22eed8c490e28ef0f36ef7e8bfd29168 132 Pfam PF03061 Thioesterase superfamily 26 97 9.0E-18 T 28-03-2018 IPR006683 Thioesterase domain Reactome: R-HSA-77289 CI104_RS14225 22eed8c490e28ef0f36ef7e8bfd29168 132 Gene3D G3DSA:3.10.129.10 1 132 4.7E-34 T 28-03-2018 CI104_RS17670 c271314a5a2ed7e785c0b18868893d5b 257 PIRSF PIRSF039085 2 257 4.7E-123 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS17670 c271314a5a2ed7e785c0b18868893d5b 257 SUPERFAMILY SSF52540 6 251 7.99E-76 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS17670 c271314a5a2ed7e785c0b18868893d5b 257 Gene3D G3DSA:3.40.50.300 1 256 5.6E-74 T 28-03-2018 CI104_RS17670 c271314a5a2ed7e785c0b18868893d5b 257 SMART SM00382 30 229 5.6E-16 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS17670 c271314a5a2ed7e785c0b18868893d5b 257 Pfam PF00005 ABC transporter 21 181 4.8E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS17670 c271314a5a2ed7e785c0b18868893d5b 257 ProSitePatterns PS00211 ABC transporters family signature. 153 167 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS23680 3445768351ded8594b5e1dbc340b14f5 231 Pfam PF08139 Prokaryotic membrane lipoprotein lipid attachment site 6 33 3.2E-6 T 28-03-2018 IPR012640 Membrane lipoprotein, lipid attachment site CI104_RS23680 3445768351ded8594b5e1dbc340b14f5 231 Pfam PF07356 Protein of unknown function (DUF1481) 42 227 3.1E-69 T 28-03-2018 IPR010858 Protein of unknown function DUF1481 CI104_RS23680 3445768351ded8594b5e1dbc340b14f5 231 PIRSF PIRSF006993 1 231 5.2E-112 T 28-03-2018 IPR016500 Uncharacterised conserved protein UCP006993 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 Pfam PF08245 Mur ligase middle domain 54 196 1.4E-10 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 ProSitePatterns PS01011 Folylpolyglutamate synthase signature 1. 52 75 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 TIGRFAM TIGR01499 folC: bifunctional protein FolC 32 413 3.4E-113 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 SUPERFAMILY SSF53623 13 284 2.44E-89 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 Gene3D G3DSA:3.40.1190.10 1 287 1.0E-80 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 Gene3D G3DSA:3.90.190.20 288 419 5.4E-30 T 28-03-2018 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 ProSitePatterns PS01012 Folylpolyglutamate synthase signature 2. 144 159 - T 28-03-2018 IPR018109 Folylpolyglutamate synthetase, conserved site GO:0004326|GO:0005524|GO:0009396 Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 SUPERFAMILY SSF53244 286 413 6.02E-34 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 PIRSF PIRSF001563 7 418 2.6E-108 T 28-03-2018 IPR001645 Folylpolyglutamate synthetase GO:0004326|GO:0005524|GO:0009396 KEGG: 00790+6.3.2.17|MetaCyc: PWY-2161|Reactome: R-HSA-196757 CI104_RS17720 765ab8be8c085d422bc06e7989494e16 422 Pfam PF02875 Mur ligase family, glutamate ligase domain 287 346 3.4E-7 T 28-03-2018 IPR004101 Mur ligase, C-terminal GO:0005524|GO:0009058|GO:0016874 Reactome: R-HSA-196757 CI104_RS14270 734d0622f8f030cf4791c6af347d6071 302 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 24 70 1.1E-12 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CI104_RS14270 734d0622f8f030cf4791c6af347d6071 302 Gene3D G3DSA:1.10.3720.10 28 291 5.4E-37 T 28-03-2018 CI104_RS14270 734d0622f8f030cf4791c6af347d6071 302 SUPERFAMILY SSF161098 100 283 2.35E-23 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS14270 734d0622f8f030cf4791c6af347d6071 302 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 300 2.2E-25 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS00260 4f5785b3d5192de3ca1214ebd225a7ae 443 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 16 426 4.7E-111 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CI104_RS00260 4f5785b3d5192de3ca1214ebd225a7ae 443 Pfam PF02378 Phosphotransferase system, EIIC 33 352 1.3E-49 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS00260 4f5785b3d5192de3ca1214ebd225a7ae 443 PIRSF PIRSF006351 5 437 3.4E-135 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS24885 522591c907f3f60a73f113154721a786 416 Pfam PF01943 Polysaccharide biosynthesis protein 4 283 2.7E-13 T 28-03-2018 IPR002797 Polysaccharide biosynthesis protein GO:0016020 CI104_RS24885 522591c907f3f60a73f113154721a786 416 Hamap MF_02024 Lipid III flippase [wzxE]. 1 416 40.638 T 28-03-2018 IPR032896 Lipid III flippase WzxE GO:0005886|GO:0009246 CI104_RS14675 cb8606ee11c0b2a775636acb1d805826 270 Gene3D G3DSA:3.40.50.300 1 259 2.0E-55 T 28-03-2018 CI104_RS14675 cb8606ee11c0b2a775636acb1d805826 270 TIGRFAM TIGR01968 minD_bact: septum site-determining protein MinD 2 268 2.0E-110 T 28-03-2018 IPR010223 ATP binding protein MinD, bacterial-type GO:0016887 CI104_RS14675 cb8606ee11c0b2a775636acb1d805826 270 Pfam PF13614 AAA domain 3 159 2.2E-20 T 28-03-2018 IPR025669 AAA domain CI104_RS14675 cb8606ee11c0b2a775636acb1d805826 270 SUPERFAMILY SSF52540 1 268 3.19E-54 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS14675 cb8606ee11c0b2a775636acb1d805826 270 PIRSF PIRSF003092 1 270 3.9E-100 T 28-03-2018 IPR025501 ATP binding protein MinD CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 ProSitePatterns PS00123 Alkaline phosphatase active site. 121 129 - T 28-03-2018 IPR018299 Alkaline phosphatase, active site GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 SUPERFAMILY SSF53649 36 470 1.23E-139 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 SMART SM00098 65 471 6.0E-227 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 PRINTS PR00113 Alkaline phosphatase signature 121 136 1.3E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 PRINTS PR00113 Alkaline phosphatase signature 64 84 1.3E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 PRINTS PR00113 Alkaline phosphatase signature 320 349 1.3E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 PRINTS PR00113 Alkaline phosphatase signature 221 231 1.3E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 PRINTS PR00113 Alkaline phosphatase signature 158 178 1.3E-49 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 Pfam PF00245 Alkaline phosphatase 64 430 2.3E-129 T 28-03-2018 IPR001952 Alkaline phosphatase GO:0008152|GO:0016791 KEGG: 00790+3.1.3.1|MetaCyc: PWY-5083|MetaCyc: PWY-5491 CI104_RS06065 750e5951c9f47599dc065d26d302df23 471 Gene3D G3DSA:3.40.720.10 22 471 1.9E-130 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 Gene3D G3DSA:3.40.50.720 2 41 9.8E-5 T 28-03-2018 CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 Pfam PF05523 WxcM-like, C-terminal 271 359 1.6E-4 T 28-03-2018 IPR008894 WxcM-like, C-terminal KEGG: 00523+5.3.2.3|MetaCyc: PWY-6953|MetaCyc: PWY-7688 CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 SUPERFAMILY SSF51182 237 365 6.84E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 Pfam PF01370 NAD dependent epimerase/dehydratase family 4 180 8.4E-14 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 Gene3D G3DSA:3.40.50.720 42 142 1.5E-9 T 28-03-2018 CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 SUPERFAMILY SSF51735 1 218 3.06E-39 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 Gene3D G3DSA:3.90.25.10 143 222 2.3E-8 T 28-03-2018 CI104_RS16435 4b5df4c2d1802930e34275daca2a878b 370 Gene3D G3DSA:2.60.120.10 246 369 2.1E-23 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS13900 f8d9584a0a341678186460db7560a1eb 253 SUPERFAMILY SSF52540 3 226 2.88E-61 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS13900 f8d9584a0a341678186460db7560a1eb 253 Gene3D G3DSA:3.40.50.300 1 240 2.0E-62 T 28-03-2018 CI104_RS13900 f8d9584a0a341678186460db7560a1eb 253 Pfam PF00005 ABC transporter 18 167 5.2E-34 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS13900 f8d9584a0a341678186460db7560a1eb 253 SMART SM00382 27 244 2.7E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS19350 a44e8045ef14bd0bb454e9355240a2f2 180 TIGRFAM TIGR00608 radc: DNA repair protein RadC 40 180 1.6E-44 T 28-03-2018 IPR001405 RadC protein CI104_RS19350 a44e8045ef14bd0bb454e9355240a2f2 180 Gene3D G3DSA:3.40.140.10 56 180 4.2E-44 T 28-03-2018 CI104_RS19350 a44e8045ef14bd0bb454e9355240a2f2 180 ProSitePatterns PS01302 Uncharacterized protein family UPF0758 signature. 129 134 - T 28-03-2018 IPR020891 Uncharacterised protein family UPF0758, conserved site CI104_RS19350 a44e8045ef14bd0bb454e9355240a2f2 180 Pfam PF04002 RadC-like JAB domain 60 178 2.8E-41 T 28-03-2018 IPR025657 RadC-like JAB domain CI104_RS23290 6e0b83661a805e87f5630a7fc310c47a 528 SUPERFAMILY SSF141868 273 519 7.59E-77 T 28-03-2018 IPR001633 EAL domain CI104_RS23290 6e0b83661a805e87f5630a7fc310c47a 528 Gene3D G3DSA:3.20.20.450 269 524 1.3E-82 T 28-03-2018 IPR001633 EAL domain CI104_RS23290 6e0b83661a805e87f5630a7fc310c47a 528 Pfam PF00563 EAL domain 273 505 3.2E-68 T 28-03-2018 IPR001633 EAL domain CI104_RS23290 6e0b83661a805e87f5630a7fc310c47a 528 SMART SM00052 267 511 2.9E-107 T 28-03-2018 IPR001633 EAL domain CI104_RS23290 6e0b83661a805e87f5630a7fc310c47a 528 Pfam PF12792 CSS motif domain associated with EAL 39 243 4.7E-42 T 28-03-2018 IPR024744 Putative cyclic diguanylate phosphodiesterase, CSS motif-containing domain CI104_RS01450 0c051ed0e413258f4ef749046ffe054b 308 Pfam PF02653 Branched-chain amino acid transport system / permease component 12 292 5.0E-69 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS01450 0c051ed0e413258f4ef749046ffe054b 308 Gene3D G3DSA:1.10.3470.10 4 299 1.8E-50 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS23395 3a74d9463f83bce9978f744ac5bcae05 290 ProSitePatterns PS00943 UbiA prenyltransferase family signature. 67 89 - T 28-03-2018 IPR030470 UbiA prenyltransferase conserved site CI104_RS23395 3a74d9463f83bce9978f744ac5bcae05 290 Hamap MF_01635 4-hydroxybenzoate octaprenyltransferase [ubiA]. 5 288 30.293 T 28-03-2018 IPR031103 4-hydroxybenzoate octaprenyltransferase GO:0004659|GO:0006744|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CI104_RS23395 3a74d9463f83bce9978f744ac5bcae05 290 TIGRFAM TIGR01474 ubiA_proteo: 4-hydroxybenzoate polyprenyl transferase 11 287 8.4E-111 T 28-03-2018 IPR006370 4-hydroxybenzoate polyprenyltransferase GO:0004659|GO:0016021 Reactome: R-HSA-1268020|Reactome: R-HSA-2142789 CI104_RS23395 3a74d9463f83bce9978f744ac5bcae05 290 Pfam PF01040 UbiA prenyltransferase family 28 271 6.2E-70 T 28-03-2018 IPR000537 UbiA prenyltransferase family GO:0016021|GO:0016765 CI104_RS12230 50b2fc18ca7861aa57ab0468f9ce217a 69 Pfam PF10965 Protein of unknown function (DUF2767) 1 67 6.9E-32 T 28-03-2018 IPR024493 Fumarase D CI104_RS12230 50b2fc18ca7861aa57ab0468f9ce217a 69 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 1 67 7.0E-30 T 28-03-2018 CI104_RS03340 a4641c42cfdedaafe294a9027343f1b2 275 Gene3D G3DSA:1.10.3720.10 1 264 2.7E-35 T 28-03-2018 CI104_RS03340 a4641c42cfdedaafe294a9027343f1b2 275 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 93 270 1.5E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS03340 a4641c42cfdedaafe294a9027343f1b2 275 SUPERFAMILY SSF161098 7 271 1.12E-58 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS16835 be54ef1361e4debaf74f17dfb83c117b 132 Pfam PF03788 LrgA family 23 113 6.3E-28 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 CI104_RS16835 be54ef1361e4debaf74f17dfb83c117b 132 Hamap MF_01144 UPF0299 membrane protein YohJ [yohJ]. 4 123 23.631 T 28-03-2018 IPR022957 Uncharacterised protein family UPF0299 CI104_RS27925 18a8f46de573b0fcf150a4c7f1586d8a 75 Pfam PF00817 impB/mucB/samB family 6 74 3.9E-15 T 28-03-2018 IPR001126 UmuC domain GO:0006281 KEGG: 00230+2.7.7.7|KEGG: 00240+2.7.7.7|Reactome: R-HSA-5656169 CI104_RS27925 18a8f46de573b0fcf150a4c7f1586d8a 75 SUPERFAMILY SSF56672 1 74 4.09E-22 T 28-03-2018 CI104_RS07565 614695b46f4dd1cbebcdc60b966600c1 196 Gene3D G3DSA:3.30.160.150 19 173 4.8E-47 T 28-03-2018 CI104_RS07565 614695b46f4dd1cbebcdc60b966600c1 196 Hamap MF_01186 LPS-assembly lipoprotein LptE [lptE]. 4 164 25.898 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CI104_RS07565 614695b46f4dd1cbebcdc60b966600c1 196 Pfam PF04390 Lipopolysaccharide-assembly 42 159 8.3E-14 T 28-03-2018 IPR007485 LPS-assembly lipoprotein LptE GO:0019867|GO:0043165 CI104_RS17195 6604ddabbc862d2ebc5a3ebeea422225 415 Pfam PF00916 Sulfate permease family 30 152 1.6E-16 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CI104_RS17195 6604ddabbc862d2ebc5a3ebeea422225 415 Pfam PF00916 Sulfate permease family 163 351 4.6E-22 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CI104_RS17715 13711d5bee0aa208ddaf8e2777f5e397 227 SUPERFAMILY SSF110997 147 224 1.27E-12 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS17715 13711d5bee0aa208ddaf8e2777f5e397 227 Hamap MF_02022 Cell division protein DedD [dedD]. 10 226 24.957 T 28-03-2018 IPR032898 Cell division protein DedD GO:0030428|GO:0032506 CI104_RS17715 13711d5bee0aa208ddaf8e2777f5e397 227 Gene3D G3DSA:3.30.70.1070 145 224 9.8E-9 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS17715 13711d5bee0aa208ddaf8e2777f5e397 227 Pfam PF05036 Sporulation related domain 148 221 1.0E-10 T 28-03-2018 IPR007730 Sporulation-related domain GO:0042834 CI104_RS20575 240bc706333c84f1c272cf55db736d3a 90 Gene3D G3DSA:3.40.630.30 3 90 1.1E-14 T 28-03-2018 CI104_RS20575 240bc706333c84f1c272cf55db736d3a 90 Pfam PF14542 GCN5-related N-acetyl-transferase 9 88 2.1E-21 T 28-03-2018 IPR031165 Yjdj-type Gcn5-related N-acetyltransferase CI104_RS20575 240bc706333c84f1c272cf55db736d3a 90 SUPERFAMILY SSF55729 4 88 1.06E-21 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 TIGRFAM TIGR00747 fabH: 3-oxoacyl-[acyl-carrier-protein] synthase III 1 317 3.1E-150 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 Hamap MF_01815 3-oxoacyl-[acyl-carrier-protein] synthase 3 [fabH]. 1 317 70.293 T 28-03-2018 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 Gene3D G3DSA:3.40.47.10 3 162 3.3E-43 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 Pfam PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 228 316 7.0E-37 T 28-03-2018 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III, C-terminal KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 Pfam PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 106 183 6.0E-29 T 28-03-2018 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III GO:0004315|GO:0006633 KEGG: 00061+2.3.1.180|MetaCyc: PWY-4381 CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 SUPERFAMILY SSF53901 3 317 5.5E-72 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS10525 0db9e5daa6c7abe5829a245fd561d0c1 317 Gene3D G3DSA:3.40.47.10 163 317 3.2E-42 T 28-03-2018 IPR016039 Thiolase-like GO:0003824|GO:0008152 CI104_RS23410 25f253a0ed104080f30c6b8e50be4266 314 Pfam PF07148 Maltose operon periplasmic protein precursor (MalM) 76 209 1.5E-50 T 28-03-2018 IPR010794 Maltose operon periplasmic GO:0008643|GO:0042597 CI104_RS10230 9528657e641cf360a473d3c6239968bb 179 Pfam PF06496 Protein of unknown function (DUF1097) 24 157 3.4E-37 T 28-03-2018 IPR009476 Protein of unknown function DUF1097 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 SUPERFAMILY SSF53187 10 182 4.65E-65 T 28-03-2018 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 SUPERFAMILY SSF53187 397 481 4.65E-65 T 28-03-2018 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PIRSF PIRSF016599 1 485 1.1E-211 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 TIGRFAM TIGR01893 aa-his-dipept: Xaa-His dipeptidase 8 482 2.0E-181 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 206 223 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 450 472 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 251 270 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 363 381 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 80 99 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 101 119 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 135 152 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 159 177 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 PRINTS PR00934 X-His dipeptidase (M25) signature 428 444 5.0E-103 T 28-03-2018 IPR001160 Peptidase M20C, Xaa-His dipeptidase GO:0006508 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 Gene3D G3DSA:3.40.630.10 5 483 4.7E-51 T 28-03-2018 CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 Pfam PF07687 Peptidase dimerisation domain 201 293 3.0E-7 T 28-03-2018 IPR011650 Peptidase M20, dimerisation domain CI104_RS05755 540bba597b65ba8773e648ee2db43d7a 485 Pfam PF01546 Peptidase family M20/M25/M40 73 480 6.6E-21 T 28-03-2018 IPR002933 Peptidase M20 GO:0008152|GO:0016787 CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 Pfam PF13237 4Fe-4S dicluster domain 221 270 1.0E-6 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 Gene3D G3DSA:3.30.70.20 235 280 5.6E-8 T 28-03-2018 CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 Pfam PF12801 4Fe-4S binding domain 83 126 7.0E-12 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 Pfam PF12801 4Fe-4S binding domain 179 211 7.3E-4 T 28-03-2018 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 SUPERFAMILY SSF54862 103 143 9.36E-21 T 28-03-2018 CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 SUPERFAMILY SSF54862 191 280 9.36E-21 T 28-03-2018 CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 ProSitePatterns PS00198 4Fe-4S ferredoxin-type iron-sulfur binding region signature. 226 237 - T 28-03-2018 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 TIGRFAM TIGR02163 napH_: ferredoxin-type protein, NapH/MauN family 24 278 3.2E-115 T 28-03-2018 IPR011886 Ferredoxin-type protein, NapH/MauN family GO:0005506 CI104_RS17160 e13df68bb7bbcfd38fb9260c176cb064 287 Gene3D G3DSA:3.30.70.20 195 234 6.7E-7 T 28-03-2018 CI104_RS11060 4d9b8a44d8567cb51cd3c888e5a0aad6 59 Pfam PF13973 Domain of unknown function (DUF4222) 3 53 1.6E-19 T 28-03-2018 IPR025317 Protein of unknown function DUF4222 CI104_RS26465 2af93fd788c7ecff6b2a5dda0b06bf95 207 Pfam PF08808 RES domain 56 170 8.3E-8 T 28-03-2018 IPR014914 RES domain CI104_RS13420 bc2e1883d2b56a4ddd210386efd8ffd4 144 Gene3D G3DSA:1.10.260.40 83 143 1.0E-4 T 28-03-2018 CI104_RS13420 bc2e1883d2b56a4ddd210386efd8ffd4 144 Pfam PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system 9 71 5.4E-8 T 28-03-2018 IPR031807 HicB-like antitoxin of toxin-antitoxin system CI104_RS13420 bc2e1883d2b56a4ddd210386efd8ffd4 144 SUPERFAMILY SSF143100 6 70 1.7E-15 T 28-03-2018 IPR035069 TTHA1013/TTHA0281-like CI104_RS13420 bc2e1883d2b56a4ddd210386efd8ffd4 144 Gene3D G3DSA:3.30.2390.10 7 78 2.9E-13 T 28-03-2018 IPR035069 TTHA1013/TTHA0281-like CI104_RS13420 bc2e1883d2b56a4ddd210386efd8ffd4 144 SUPERFAMILY SSF47413 88 143 7.64E-6 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PIRSF PIRSF002869 1 511 2.1E-182 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 Hamap MF_02078 Probable lipid II flippase MurJ [murJ]. 3 467 20.461 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 Pfam PF03023 MviN-like protein 28 478 1.9E-159 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 33 52 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 409 426 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 52 68 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 259 285 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 157 178 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 357 376 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 PRINTS PR01806 Virulence factor MviN signature 133 157 2.0E-87 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS10400 b541c512e111cb29a4c8516d1e800066 511 TIGRFAM TIGR01695 murJ_mviN: murein biosynthesis integral membrane protein MurJ 2 508 1.0E-177 T 28-03-2018 IPR004268 Peptidoglycan biosynthesis protein MurJ CI104_RS21105 45d78f6eaea10e6882016ad9aefdf813 109 Pfam PF05164 Cell division protein ZapA 6 90 3.9E-20 T 28-03-2018 IPR007838 Cell division protein ZapA-like CI104_RS21105 45d78f6eaea10e6882016ad9aefdf813 109 SUPERFAMILY SSF102829 6 94 1.12E-24 T 28-03-2018 IPR007838 Cell division protein ZapA-like CI104_RS21105 45d78f6eaea10e6882016ad9aefdf813 109 Hamap MF_02012 Cell division protein ZapA [zapA]. 1 109 36.753 T 28-03-2018 IPR023771 Cell division protein ZapA, eubacteria CI104_RS27965 bc86fe5d82a42dd888bca8d0097e9459 321 SMART SM00470 65 154 9.1E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS27965 bc86fe5d82a42dd888bca8d0097e9459 321 Pfam PF02195 ParB-like nuclease domain 78 153 1.5E-11 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS27965 bc86fe5d82a42dd888bca8d0097e9459 321 SUPERFAMILY SSF109709 158 232 6.02E-5 T 28-03-2018 CI104_RS27965 bc86fe5d82a42dd888bca8d0097e9459 321 TIGRFAM TIGR00180 parB_part: ParB/RepB/Spo0J family partition protein 67 233 7.5E-44 T 28-03-2018 IPR004437 ParB/RepB/Spo0J partition protein family GO:0003677 CI104_RS27965 bc86fe5d82a42dd888bca8d0097e9459 321 Gene3D G3DSA:3.90.1530.10 58 157 1.7E-6 T 28-03-2018 CI104_RS27965 bc86fe5d82a42dd888bca8d0097e9459 321 SUPERFAMILY SSF110849 81 156 1.36E-10 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS01360 06bc8665ab5e86c924a0e4be92c9e764 185 Gene3D G3DSA:3.40.1000.10 44 185 1.4E-16 T 28-03-2018 CI104_RS01360 06bc8665ab5e86c924a0e4be92c9e764 185 Pfam PF08786 DcrB 51 181 2.2E-30 T 28-03-2018 IPR014894 Protein DcrB CI104_RS02520 522291e2bdef187216c9a1e7c6fc9141 482 Gene3D G3DSA:3.40.605.10 7 271 3.0E-97 T 28-03-2018 IPR016162 Aldehyde dehydrogenase N-terminal domain GO:0008152|GO:0016491|GO:0055114 CI104_RS02520 522291e2bdef187216c9a1e7c6fc9141 482 ProSitePatterns PS00687 Aldehyde dehydrogenases glutamic acid active site. 253 260 - T 28-03-2018 IPR029510 Aldehyde dehydrogenase, glutamic acid active site GO:0008152|GO:0016491|GO:0055114 CI104_RS02520 522291e2bdef187216c9a1e7c6fc9141 482 SUPERFAMILY SSF53720 6 480 3.8E-167 T 28-03-2018 IPR016161 Aldehyde/histidinol dehydrogenase GO:0008152|GO:0016491|GO:0055114 CI104_RS02520 522291e2bdef187216c9a1e7c6fc9141 482 TIGRFAM TIGR01780 SSADH: succinate-semialdehyde dehydrogenase 29 475 2.0E-200 T 28-03-2018 IPR010102 Succinate semialdehyde dehydrogenase GO:0009013|GO:0009450|GO:0055114 Reactome: R-HSA-916853 CI104_RS02520 522291e2bdef187216c9a1e7c6fc9141 482 Pfam PF00171 Aldehyde dehydrogenase family 25 476 2.8E-170 T 28-03-2018 IPR015590 Aldehyde dehydrogenase domain GO:0008152|GO:0016491|GO:0055114 CI104_RS02520 522291e2bdef187216c9a1e7c6fc9141 482 Gene3D G3DSA:3.40.309.10 272 463 1.1E-70 T 28-03-2018 CI104_RS19945 0703eeb5d0f1b52ae9d46de7566f774f 159 Gene3D G3DSA:3.30.1330.50 1 158 1.6E-73 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CI104_RS19945 0703eeb5d0f1b52ae9d46de7566f774f 159 TIGRFAM TIGR00151 ispF: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 2 156 3.6E-72 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CI104_RS19945 0703eeb5d0f1b52ae9d46de7566f774f 159 Hamap MF_00107 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase [ispF]. 1 156 36.951 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CI104_RS19945 0703eeb5d0f1b52ae9d46de7566f774f 159 Pfam PF02542 YgbB family 1 154 1.1E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CI104_RS19945 0703eeb5d0f1b52ae9d46de7566f774f 159 SUPERFAMILY SSF69765 1 156 1.44E-66 T 28-03-2018 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase GO:0008685|GO:0016114 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CI104_RS19945 0703eeb5d0f1b52ae9d46de7566f774f 159 ProSitePatterns PS01350 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase signature. 35 50 - T 28-03-2018 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site GO:0008685 KEGG: 00900+4.6.1.12|MetaCyc: PWY-7560 CI104_RS14420 88ecd4c1fe84400000f0660ef8c8efb1 269 Pfam PF13371 Tetratricopeptide repeat 187 259 6.1E-26 T 28-03-2018 CI104_RS14420 88ecd4c1fe84400000f0660ef8c8efb1 269 Pfam PF13369 Transglutaminase-like superfamily 33 184 5.7E-41 T 28-03-2018 IPR032698 Protein SirB1, N-terminal Reactome: R-HSA-8951664|Reactome: R-HSA-983168 CI104_RS14420 88ecd4c1fe84400000f0660ef8c8efb1 269 Gene3D G3DSA:1.25.40.10 45 268 3.3E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS09840 eadcf359afe1c3242eb69d73b5441114 269 ProSitePatterns PS00167 Tryptophan synthase alpha chain signature. 48 61 - T 28-03-2018 IPR018204 Tryptophan synthase, alpha chain, active site GO:0004834 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09840 eadcf359afe1c3242eb69d73b5441114 269 Hamap MF_00131 Tryptophan synthase alpha chain [trpA]. 14 265 36.615 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09840 eadcf359afe1c3242eb69d73b5441114 269 Gene3D G3DSA:3.20.20.70 1 268 9.2E-68 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS09840 eadcf359afe1c3242eb69d73b5441114 269 Pfam PF00290 Tryptophan synthase alpha chain 8 266 7.9E-94 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09840 eadcf359afe1c3242eb69d73b5441114 269 TIGRFAM TIGR00262 trpA: tryptophan synthase, alpha subunit 8 263 2.3E-102 T 28-03-2018 IPR002028 Tryptophan synthase, alpha chain GO:0004834|GO:0006568 KEGG: 00260+4.2.1.20|KEGG: 00400+4.2.1.20 CI104_RS09840 eadcf359afe1c3242eb69d73b5441114 269 SUPERFAMILY SSF51366 1 266 1.88E-88 T 28-03-2018 IPR011060 Ribulose-phosphate binding barrel GO:0003824|GO:0008152 CI104_RS18195 960bb514b6cc6fa931af4405d8b78db8 299 Pfam PF04261 Dyp-type peroxidase family 5 295 5.4E-96 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CI104_RS18195 960bb514b6cc6fa931af4405d8b78db8 299 TIGRFAM TIGR01413 Dyp_perox_fam: Dyp-type peroxidase family 5 295 1.4E-88 T 28-03-2018 IPR006314 Dyp-type peroxidase GO:0004601|GO:0020037|GO:0055114 CI104_RS18195 960bb514b6cc6fa931af4405d8b78db8 299 SUPERFAMILY SSF54909 1 298 1.56E-89 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS14660 ea91f9a0e40913548f7cc290df231878 219 Pfam PF01557 Fumarylacetoacetate (FAA) hydrolase family 18 209 8.5E-52 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS14660 ea91f9a0e40913548f7cc290df231878 219 SUPERFAMILY SSF56529 11 213 7.06E-68 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS14660 ea91f9a0e40913548f7cc290df231878 219 Gene3D G3DSA:3.90.850.10 2 218 5.1E-69 T 28-03-2018 IPR011234 Fumarylacetoacetase, C-terminal-related GO:0003824|GO:0008152 CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 Pfam PF00196 Bacterial regulatory proteins, luxR family 129 180 8.8E-14 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 130 144 3.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 144 160 3.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 PRINTS PR00038 LuxR bacterial regulatory protein HTH signature 160 172 3.9E-11 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 SUPERFAMILY SSF46894 121 187 1.05E-15 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 Gene3D G3DSA:1.10.10.10 127 187 6.8E-14 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS07085 405a134fe82dd1085caf51d9681150a5 195 SMART SM00421 127 184 3.7E-12 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS07410 19ab008d35030979aac5106528264312 207 Pfam PF01613 Flavin reductase like domain 23 169 3.0E-19 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CI104_RS07410 19ab008d35030979aac5106528264312 207 SUPERFAMILY SSF50475 2 189 1.82E-48 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS07410 19ab008d35030979aac5106528264312 207 SMART SM00903 21 172 1.5E-14 T 28-03-2018 IPR002563 Flavin reductase like domain GO:0010181 CI104_RS07410 19ab008d35030979aac5106528264312 207 Gene3D G3DSA:2.30.110.10 7 189 8.7E-45 T 28-03-2018 IPR012349 FMN-binding split barrel GO:0048037 CI104_RS07375 7f4eda25f51a4dddc0b576952520375b 248 Gene3D G3DSA:3.10.450.70 24 86 2.3E-26 T 28-03-2018 CI104_RS07375 7f4eda25f51a4dddc0b576952520375b 248 Pfam PF13098 Thioredoxin-like domain 114 244 3.0E-16 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS07375 7f4eda25f51a4dddc0b576952520375b 248 Gene3D G3DSA:3.40.30.10 104 247 8.1E-21 T 28-03-2018 CI104_RS07375 7f4eda25f51a4dddc0b576952520375b 248 SUPERFAMILY SSF54423 19 78 1.7E-21 T 28-03-2018 IPR018950 Disulphide bond isomerase, DsbC/G, N-terminal CI104_RS07375 7f4eda25f51a4dddc0b576952520375b 248 SUPERFAMILY SSF52833 83 245 8.17E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS18675 90ed5f1ba8d5d58fd225ae39711b989a 199 SUPERFAMILY SSF53697 7 192 5.88E-34 T 28-03-2018 CI104_RS18675 90ed5f1ba8d5d58fd225ae39711b989a 199 Gene3D G3DSA:3.40.50.10490 4 198 2.5E-38 T 28-03-2018 CI104_RS18675 90ed5f1ba8d5d58fd225ae39711b989a 199 Pfam PF01380 SIS domain 38 166 9.0E-20 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS07150 b1b8c81e0c9d63fc4ad32e9727ca0dc6 122 SUPERFAMILY SSF142906 8 119 9.02E-37 T 28-03-2018 CI104_RS07150 b1b8c81e0c9d63fc4ad32e9727ca0dc6 122 Pfam PF04237 YjbR 15 106 5.1E-23 T 28-03-2018 IPR007351 Uncharacterised protein YjbR CI104_RS09130 5ce2571d9d31c099c5e7689ebeaba93d 215 Pfam PF00753 Metallo-beta-lactamase superfamily 10 192 9.0E-33 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS09130 5ce2571d9d31c099c5e7689ebeaba93d 215 SMART SM00849 12 192 1.6E-44 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS09130 5ce2571d9d31c099c5e7689ebeaba93d 215 SUPERFAMILY SSF56281 2 209 7.99E-62 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS09130 5ce2571d9d31c099c5e7689ebeaba93d 215 Gene3D G3DSA:3.60.15.10 1 213 2.2E-45 T 28-03-2018 IPR001279 Metallo-beta-lactamase CI104_RS23475 038c9f0fd349c3a2335b4425d64a918d 261 Gene3D G3DSA:3.30.460.10 2 149 1.4E-5 T 28-03-2018 CI104_RS23475 038c9f0fd349c3a2335b4425d64a918d 261 Pfam PF10127 Predicted nucleotidyltransferase 10 256 1.8E-94 T 28-03-2018 IPR018775 Nucleotidyltransferase, predicted CI104_RS09525 590a7511ccf436eabc0e7c5cdee08855 349 Gene3D G3DSA:3.90.1690.10 2 349 5.6E-70 T 28-03-2018 CI104_RS09525 590a7511ccf436eabc0e7c5cdee08855 349 Pfam PF03864 Phage major capsid protein E 5 347 1.0E-81 T 28-03-2018 IPR005564 Major capsid protein GpE GO:0019028 CI104_RS14910 e3e9bc8d1ad182ae5c34c459fdb74e1a 135 Gene3D G3DSA:1.10.10.60 78 132 5.3E-18 T 28-03-2018 CI104_RS14910 e3e9bc8d1ad182ae5c34c459fdb74e1a 135 Gene3D G3DSA:1.10.10.60 32 76 2.1E-14 T 28-03-2018 CI104_RS14910 e3e9bc8d1ad182ae5c34c459fdb74e1a 135 SUPERFAMILY SSF46689 31 123 1.79E-23 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS14910 e3e9bc8d1ad182ae5c34c459fdb74e1a 135 Pfam PF08765 Mor transcription activator family 31 132 2.7E-30 T 28-03-2018 IPR014875 Mor transcription activator CI104_RS19580 b266dda3ebe00fe5b5d6ffc9d18ed5f0 319 Pfam PF00268 Ribonucleotide reductase, small chain 9 280 6.3E-83 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19580 b266dda3ebe00fe5b5d6ffc9d18ed5f0 319 SUPERFAMILY SSF47240 6 319 2.43E-100 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS19580 b266dda3ebe00fe5b5d6ffc9d18ed5f0 319 TIGRFAM TIGR04171 RNR_1b_NrdF: ribonucleoside-diphosphate reductase, class 1b, beta subunit 7 319 3.0E-142 T 28-03-2018 IPR026494 Ribonucleoside reductase subunit beta, NrdF GO:0005971|GO:0009263 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227 CI104_RS19580 b266dda3ebe00fe5b5d6ffc9d18ed5f0 319 Gene3D G3DSA:1.10.620.20 1 292 5.4E-73 T 28-03-2018 CI104_RS19580 b266dda3ebe00fe5b5d6ffc9d18ed5f0 319 ProSitePatterns PS00368 Ribonucleotide reductase small subunit signature. 97 113 - T 28-03-2018 IPR030475 Ribonucleotide reductase small subunit, acitve site KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS19580 b266dda3ebe00fe5b5d6ffc9d18ed5f0 319 PIRSF PIRSF000355 1 316 1.7E-76 T 28-03-2018 IPR000358 Ribonucleotide reductase small subunit family GO:0055114 KEGG: 00230+1.17.4.1|KEGG: 00240+1.17.4.1|KEGG: 00480+1.17.4.1|MetaCyc: PWY-6545|MetaCyc: PWY-7184|MetaCyc: PWY-7198|MetaCyc: PWY-7210|MetaCyc: PWY-7220|MetaCyc: PWY-7222|MetaCyc: PWY-7226|MetaCyc: PWY-7227|Reactome: R-HSA-499943 CI104_RS13240 7e5c785c01879e6afdec4b7c42d69bea 225 Pfam PF02665 Nitrate reductase gamma subunit 5 224 2.9E-78 T 28-03-2018 IPR023234 NarG-like domain CI104_RS13240 7e5c785c01879e6afdec4b7c42d69bea 225 Gene3D G3DSA:1.20.950.20 1 216 3.0E-40 T 28-03-2018 CI104_RS13240 7e5c785c01879e6afdec4b7c42d69bea 225 TIGRFAM TIGR00351 narI: respiratory nitrate reductase, gamma subunit 1 225 4.5E-123 T 28-03-2018 IPR003816 Nitrate reductase, gamma subunit GO:0008940|GO:0009325|GO:0055114 KEGG: 00910+1.7.99.4 CI104_RS13240 7e5c785c01879e6afdec4b7c42d69bea 225 SUPERFAMILY SSF103501 2 224 1.96E-69 T 28-03-2018 IPR023234 NarG-like domain CI104_RS17255 f6618dea80c5c2605368f1b1ade86f94 220 ProSitePatterns PS01273 Coenzyme A transferases signature 1. 17 32 - T 28-03-2018 IPR004163 Coenzyme A transferase binding site GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS17255 f6618dea80c5c2605368f1b1ade86f94 220 Pfam PF01144 Coenzyme A transferase 7 214 3.6E-69 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS17255 f6618dea80c5c2605368f1b1ade86f94 220 SMART SM00882 5 216 9.8E-69 T 28-03-2018 IPR004165 Coenzyme A transferase family I GO:0008152|GO:0008410 Reactome: R-HSA-77108 CI104_RS17255 f6618dea80c5c2605368f1b1ade86f94 220 TIGRFAM TIGR02429 pcaI_scoA_fam: 3-oxoacid CoA-transferase, A subunit 7 215 1.3E-63 T 28-03-2018 IPR012792 3-oxoacid CoA-transferase, subunit A GO:0008410 Reactome: R-HSA-77108 CI104_RS17255 f6618dea80c5c2605368f1b1ade86f94 220 Gene3D G3DSA:3.40.1080.10 1 220 2.0E-72 T 28-03-2018 CI104_RS17255 f6618dea80c5c2605368f1b1ade86f94 220 SUPERFAMILY SSF100950 2 217 1.58E-74 T 28-03-2018 CI104_RS12680 17be8159ea5c59a0fc9edb6bb96e37a5 231 TIGRFAM TIGR00347 bioD: dethiobiotin synthase 6 172 1.8E-39 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CI104_RS12680 17be8159ea5c59a0fc9edb6bb96e37a5 231 SUPERFAMILY SSF52540 1 212 1.56E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS12680 17be8159ea5c59a0fc9edb6bb96e37a5 231 Pfam PF13500 AAA domain 4 207 2.9E-29 T 28-03-2018 CI104_RS12680 17be8159ea5c59a0fc9edb6bb96e37a5 231 PIRSF PIRSF006755 1 224 1.4E-62 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CI104_RS12680 17be8159ea5c59a0fc9edb6bb96e37a5 231 Hamap MF_00336 ATP-dependent dethiobiotin synthetase BioD [bioD]. 2 214 23.972 T 28-03-2018 IPR004472 Dethiobiotin synthase BioD GO:0000287|GO:0004141|GO:0005524|GO:0009102 KEGG: 00780+6.3.3.3|MetaCyc: PWY-7380 CI104_RS12680 17be8159ea5c59a0fc9edb6bb96e37a5 231 Gene3D G3DSA:3.40.50.300 2 214 1.0E-45 T 28-03-2018 CI104_RS04460 13fe4258b37e32edda386faa50ec5fdf 21 TIGRFAM TIGR02077 thr_lead_pep: thr operon leader peptide 1 21 2.2E-9 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CI104_RS04460 13fe4258b37e32edda386faa50ec5fdf 21 Hamap MF_01907 thr operon leader peptide [thrL]. 1 21 11.934 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CI104_RS04460 13fe4258b37e32edda386faa50ec5fdf 21 Pfam PF08254 Threonine leader peptide 1 21 5.0E-10 T 28-03-2018 IPR011720 Thr operon leader peptide GO:0009088|GO:0031554|GO:0031556 CI104_RS08985 15fb0ade4f1a4850e76fd36933a9650e 421 Pfam PF03611 PTS system sugar-specific permease component 10 405 1.6E-122 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CI104_RS10130 e86fc85d91cb676789e75f8499b7d64a 162 SUPERFAMILY SSF46785 36 115 2.93E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS10130 e86fc85d91cb676789e75f8499b7d64a 162 Gene3D G3DSA:1.10.10.10 17 92 3.0E-6 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27295 8a4af65bf5f08376b97eb40b443a78e8 421 Gene3D G3DSA:2.40.160.10 1 420 6.0E-47 T 28-03-2018 CI104_RS27295 8a4af65bf5f08376b97eb40b443a78e8 421 Pfam PF03573 outer membrane porin, OprD family 38 395 3.3E-7 T 28-03-2018 IPR005318 Outer membrane porin, bacterial GO:0006810|GO:0015288|GO:0016021 CI104_RS05240 d4d81a4f4750d90fa7c90b565fbe140e 266 SUPERFAMILY SSF53807 25 262 2.24E-54 T 28-03-2018 CI104_RS05240 d4d81a4f4750d90fa7c90b565fbe140e 266 Hamap MF_01000 Vitamin B12-binding protein [btuF]. 2 266 46.196 T 28-03-2018 IPR023544 ABC transporter, vitamin B12-binding protein GO:0015889|GO:0031419|GO:0042597 CI104_RS05240 d4d81a4f4750d90fa7c90b565fbe140e 266 Pfam PF01497 Periplasmic binding protein 26 218 8.0E-22 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CI104_RS05240 d4d81a4f4750d90fa7c90b565fbe140e 266 Gene3D G3DSA:3.40.50.1980 22 140 8.3E-26 T 28-03-2018 CI104_RS05240 d4d81a4f4750d90fa7c90b565fbe140e 266 Gene3D G3DSA:3.40.50.1980 141 266 1.2E-22 T 28-03-2018 CI104_RS11260 f5603fc64596f8687f5ab90c47dfb940 290 Gene3D G3DSA:3.40.1350.10 1 133 1.0E-15 T 28-03-2018 CI104_RS11260 f5603fc64596f8687f5ab90c47dfb940 290 SUPERFAMILY SSF52980 6 120 1.39E-7 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS22185 82940f2434327e27c865b246d8ffb7ea 106 Gene3D G3DSA:1.10.1790.10 2 106 3.7E-9 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS22185 82940f2434327e27c865b246d8ffb7ea 106 TIGRFAM TIGR03582 EF_0829: PRD domain protein, EF_0829/AHA_3910 family 10 105 1.5E-41 T 28-03-2018 IPR020044 PRD domain protein, EF0829/AHA3910 CI104_RS22185 82940f2434327e27c865b246d8ffb7ea 106 SUPERFAMILY SSF63520 25 103 5.49E-7 T 28-03-2018 IPR011608 PRD domain GO:0006355 CI104_RS09435 6f2407ad13a2348a30831a6964175c01 126 Pfam PF05866 Endodeoxyribonuclease RusA 48 115 2.0E-12 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CI104_RS09435 6f2407ad13a2348a30831a6964175c01 126 Gene3D G3DSA:3.30.1330.70 3 117 9.1E-8 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CI104_RS09435 6f2407ad13a2348a30831a6964175c01 126 SUPERFAMILY SSF103084 33 115 6.41E-8 T 28-03-2018 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like GO:0000287|GO:0006281|GO:0006310 CI104_RS23400 ee1e21b028bddba4db05912a7d344c9d 165 Pfam PF04345 Chorismate lyase 18 165 1.7E-30 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CI104_RS23400 ee1e21b028bddba4db05912a7d344c9d 165 SUPERFAMILY SSF64288 6 165 8.14E-45 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS23400 ee1e21b028bddba4db05912a7d344c9d 165 Hamap MF_01632 Chorismate pyruvate-lyase [ubiC]. 12 165 24.722 T 28-03-2018 IPR007440 Chorismate--pyruvate lyase GO:0005737|GO:0006744|GO:0008813 KEGG: 00130+4.1.3.40|MetaCyc: PWY-5755|MetaCyc: PWY-5870|MetaCyc: PWY-6148|MetaCyc: PWY-7742|MetaCyc: PWY-7745 CI104_RS23400 ee1e21b028bddba4db05912a7d344c9d 165 Gene3D G3DSA:3.40.1410.10 2 165 2.4E-45 T 28-03-2018 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CI104_RS20830 89df3ce52133b16f79a108a99b75a426 256 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 250 6.7E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS20830 89df3ce52133b16f79a108a99b75a426 256 Gene3D G3DSA:1.10.3720.10 4 254 1.7E-25 T 28-03-2018 CI104_RS20830 89df3ce52133b16f79a108a99b75a426 256 SUPERFAMILY SSF161098 58 240 8.9E-29 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS07605 a6b3bc4afeb923e154e132cabff9676a 512 SUPERFAMILY SSF56317 215 490 2.88E-37 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS07605 a6b3bc4afeb923e154e132cabff9676a 512 TIGRFAM TIGR00546 lnt: apolipoprotein N-acyltransferase 63 458 1.7E-116 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CI104_RS07605 a6b3bc4afeb923e154e132cabff9676a 512 Pfam PF00795 Carbon-nitrogen hydrolase 223 478 5.9E-39 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS07605 a6b3bc4afeb923e154e132cabff9676a 512 Gene3D G3DSA:3.60.110.10 219 481 3.5E-36 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS07605 a6b3bc4afeb923e154e132cabff9676a 512 Hamap MF_01148 Apolipoprotein N-acyltransferase [lnt]. 10 495 24.137 T 28-03-2018 IPR004563 Apolipoprotein N-acyltransferase GO:0016021|GO:0016410|GO:0042158 CI104_RS23560 647c0c55cb13b91b8ba5c7344953cecf 274 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 4 273 4.3E-142 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS23560 647c0c55cb13b91b8ba5c7344953cecf 274 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 5 273 9.8E-105 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS04180 2d2f6533b9ca23c17655b73113f78b89 197 Hamap MF_01405 dITP/XTP pyrophosphatase [rdgB]. 2 196 51.86 T 28-03-2018 IPR020922 dITP/XTP pyrophosphatase GO:0009143|GO:0017111 CI104_RS04180 2d2f6533b9ca23c17655b73113f78b89 197 TIGRFAM TIGR00042 TIGR00042: non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family 3 194 5.2E-70 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CI104_RS04180 2d2f6533b9ca23c17655b73113f78b89 197 SUPERFAMILY SSF52972 1 195 2.2E-74 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS04180 2d2f6533b9ca23c17655b73113f78b89 197 Pfam PF01725 Ham1 family 4 192 9.3E-57 T 28-03-2018 IPR002637 Ham1-like protein GO:0009143|GO:0047429 Reactome: R-HSA-74259 CI104_RS04180 2d2f6533b9ca23c17655b73113f78b89 197 Gene3D G3DSA:3.90.950.10 1 197 7.7E-81 T 28-03-2018 IPR029001 Inosine triphosphate pyrophosphatase-like CI104_RS08070 c249d479034ddb1d2fda0a316c9ef4bc 404 TIGRFAM TIGR02794 tolA_full: protein TolA 12 233 3.7E-47 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CI104_RS08070 c249d479034ddb1d2fda0a316c9ef4bc 404 TIGRFAM TIGR02794 tolA_full: protein TolA 225 404 6.7E-43 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CI104_RS08070 c249d479034ddb1d2fda0a316c9ef4bc 404 Pfam PF06519 TolA C-terminal 309 402 4.1E-38 T 28-03-2018 IPR014161 Tol-Pal system, TolA GO:0005215|GO:0006810|GO:0016020 CI104_RS08070 c249d479034ddb1d2fda0a316c9ef4bc 404 SUPERFAMILY SSF74653 317 404 3.73E-22 T 28-03-2018 CI104_RS08070 c249d479034ddb1d2fda0a316c9ef4bc 404 Gene3D G3DSA:3.30.1150.10 327 399 1.0E-19 T 28-03-2018 CI104_RS24450 786159ba0fcbdf277386abfc84c02f8c 290 PIRSF PIRSF035875 1 290 9.4E-75 T 28-03-2018 IPR017039 Virulence factor BrkB CI104_RS24450 786159ba0fcbdf277386abfc84c02f8c 290 Pfam PF03631 Virulence factor BrkB 29 274 8.2E-58 T 28-03-2018 IPR017039 Virulence factor BrkB CI104_RS24450 786159ba0fcbdf277386abfc84c02f8c 290 TIGRFAM TIGR00765 yihY_not_rbn: YihY family inner membrane protein 18 275 2.7E-103 T 28-03-2018 IPR017039 Virulence factor BrkB CI104_RS24450 786159ba0fcbdf277386abfc84c02f8c 290 Hamap MF_00672 UPF0761 membrane protein YihY [yihY]. 16 287 23.488 T 28-03-2018 IPR023679 Uncharacterised protein family UPF0761, bacterial CI104_RS04385 f71130a4bbd86f63146b20a0306cf7d9 211 TIGRFAM TIGR00948 2a75: L-lysine exporter 15 191 8.5E-72 T 28-03-2018 IPR004777 L-lysine exporter/arginine exporter GO:0016021 CI104_RS04385 f71130a4bbd86f63146b20a0306cf7d9 211 Hamap MF_01901 Arginine exporter protein ArgO [argO]. 1 205 39.764 T 28-03-2018 IPR023445 Arginine exporter protein ArgO, enterobacteria GO:0015181|GO:0015809 CI104_RS04385 f71130a4bbd86f63146b20a0306cf7d9 211 Pfam PF01810 LysE type translocator 14 201 2.5E-56 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS21185 4d051cf5c72cdb27aea0143490882f20 515 Pfam PF11230 Protein of unknown function (DUF3029) 22 504 6.3E-224 T 28-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CI104_RS21185 4d051cf5c72cdb27aea0143490882f20 515 Gene3D G3DSA:3.20.70.20 167 474 5.8E-32 T 28-03-2018 CI104_RS21185 4d051cf5c72cdb27aea0143490882f20 515 SUPERFAMILY SSF51998 24 470 4.27E-90 T 28-03-2018 CI104_RS21185 4d051cf5c72cdb27aea0143490882f20 515 TIGRFAM TIGR04040 glycyl_YjjI: glycine radical enzyme, YjjI family 11 504 7.3E-238 T 28-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CI104_RS21185 4d051cf5c72cdb27aea0143490882f20 515 PIRSF PIRSF028991 6 515 1.1E-276 T 28-03-2018 IPR016905 Glycyl radical enzyme, HI0521, predicted CI104_RS09680 cc55fae406d12662d703fab133db05e2 229 Pfam PF09850 Type VI secretion system protein DotU 14 215 4.6E-38 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CI104_RS09680 cc55fae406d12662d703fab133db05e2 229 TIGRFAM TIGR03349 IV_VI_DotU: type IV/VI secretion system protein, DotU family 14 218 4.3E-32 T 28-03-2018 IPR017732 Type IV / VI secretion system, DotU CI104_RS14080 5cb6b06079e1f7b54520cf95bf00ec9b 254 Gene3D G3DSA:1.20.144.10 6 250 1.2E-25 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS14080 5cb6b06079e1f7b54520cf95bf00ec9b 254 Pfam PF01569 PAP2 superfamily 80 232 5.3E-35 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS14080 5cb6b06079e1f7b54520cf95bf00ec9b 254 SUPERFAMILY SSF48317 18 113 1.05E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS14080 5cb6b06079e1f7b54520cf95bf00ec9b 254 SUPERFAMILY SSF48317 145 233 1.05E-32 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS14080 5cb6b06079e1f7b54520cf95bf00ec9b 254 SMART SM00014 76 227 4.3E-39 T 28-03-2018 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CI104_RS17890 e47444364682f9a58f27632ab5a336f1 110 Gene3D G3DSA:3.30.160.160 54 99 2.8E-12 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CI104_RS17890 e47444364682f9a58f27632ab5a336f1 110 Gene3D G3DSA:3.30.160.160 4 48 7.0E-18 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CI104_RS17890 e47444364682f9a58f27632ab5a336f1 110 Pfam PF07411 Domain of unknown function (DUF1508) 11 57 2.5E-22 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CI104_RS17890 e47444364682f9a58f27632ab5a336f1 110 Pfam PF07411 Domain of unknown function (DUF1508) 61 108 1.1E-19 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CI104_RS17890 e47444364682f9a58f27632ab5a336f1 110 SUPERFAMILY SSF160113 55 108 1.7E-15 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CI104_RS17890 e47444364682f9a58f27632ab5a336f1 110 SUPERFAMILY SSF160113 1 57 5.23E-20 T 28-03-2018 IPR010879 Domain of unknown function DUF1508 CI104_RS14410 ddc923533a0c5e0a2f90100fbe1f1009 366 TIGRFAM TIGR00846 caca2: calcium/proton exchanger 2 365 1.2E-124 T 28-03-2018 IPR004713 Calcium/proton exchanger GO:0006812|GO:0008324|GO:0016021|GO:0055085 CI104_RS14410 ddc923533a0c5e0a2f90100fbe1f1009 366 Pfam PF01699 Sodium/calcium exchanger protein 224 364 9.6E-8 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CI104_RS14410 ddc923533a0c5e0a2f90100fbe1f1009 366 Pfam PF01699 Sodium/calcium exchanger protein 41 190 3.0E-14 T 28-03-2018 IPR004837 Sodium/calcium exchanger membrane region GO:0016021|GO:0055085 Reactome: R-HSA-425561 CI104_RS27570 c0a8395579a1932d8f3e5c2f25fb5b3b 126 Pfam PF01527 Transposase 15 85 1.4E-13 T 28-03-2018 IPR002514 Transposase IS3/IS911family GO:0003677|GO:0004803|GO:0006313 CI104_RS27570 c0a8395579a1932d8f3e5c2f25fb5b3b 126 Gene3D G3DSA:1.10.10.10 7 73 1.0E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27570 c0a8395579a1932d8f3e5c2f25fb5b3b 126 SUPERFAMILY SSF46689 14 64 4.84E-9 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS27105 af5c39bfda3565c1846a1ce0c19ab83a 351 Pfam PF01051 Initiator Replication protein 21 274 1.4E-13 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CI104_RS27105 af5c39bfda3565c1846a1ce0c19ab83a 351 Gene3D G3DSA:3.70.10.10 14 272 9.7E-4 T 28-03-2018 CI104_RS14965 bd3d062262e20ae8c54dfc2add370662 175 Hamap MF_00914 L-alanine exporter AlaE [alaE]. 4 144 26.035 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CI104_RS14965 bd3d062262e20ae8c54dfc2add370662 175 Pfam PF06610 L-alanine exporter 10 141 1.5E-49 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CI104_RS14965 bd3d062262e20ae8c54dfc2add370662 175 ProDom PD090021 MEMBRANE YGAW TRANSMEMBRANE INNER VV2263 Y3636 VC1828 VP1070 31 141 2.0E-11 T 28-03-2018 IPR010574 L-alanine exporter AlaE GO:0016021|GO:0034639 CI104_RS25830 7dcca1946c443e1f7704dab06cbcce5e 163 Pfam PF11284 Protein of unknown function (DUF3085) 74 160 1.0E-11 T 28-03-2018 IPR021436 Protein of unknown function DUF3085 CI104_RS07485 1b655819d8e9ffb621aed4423b4cbc8a 262 SUPERFAMILY SSF56317 1 254 1.44E-59 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS07485 1b655819d8e9ffb621aed4423b4cbc8a 262 Pfam PF00795 Carbon-nitrogen hydrolase 3 245 1.1E-39 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS07485 1b655819d8e9ffb621aed4423b4cbc8a 262 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 143 163 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CI104_RS07485 1b655819d8e9ffb621aed4423b4cbc8a 262 Gene3D G3DSA:3.60.110.10 1 257 4.2E-59 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS05770 04671db014bca640c166bc1424f09421 133 Hamap MF_01178 Sigma factor-binding protein Crl [crl]. 1 128 32.647 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CI104_RS05770 04671db014bca640c166bc1424f09421 133 Pfam PF07417 Transcriptional regulator Crl 5 122 6.1E-54 T 28-03-2018 IPR009986 Sigma factor-binding protein Crl GO:0005737|GO:0045893 CI104_RS28010 cdb3765dbd416d98b53cccff0a4361a0 298 Gene3D G3DSA:3.30.420.10 122 297 6.3E-43 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28010 cdb3765dbd416d98b53cccff0a4361a0 298 Pfam PF00665 Integrase core domain 132 245 2.9E-35 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS28010 cdb3765dbd416d98b53cccff0a4361a0 298 SUPERFAMILY SSF53098 124 288 4.55E-44 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS28010 cdb3765dbd416d98b53cccff0a4361a0 298 Pfam PF13276 HTH-like domain 51 104 4.7E-12 T 28-03-2018 IPR025948 HTH-like domain CI104_RS00040 10a7cf141308173cbf83c4723fd2a87c 205 Pfam PF01081 KDPG and KHG aldolase 6 183 1.9E-28 T 28-03-2018 IPR000887 KDPG/KHG aldolase GO:0008152|GO:0016829 KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS00040 10a7cf141308173cbf83c4723fd2a87c 205 Gene3D G3DSA:3.20.20.70 1 205 1.2E-43 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS00040 10a7cf141308173cbf83c4723fd2a87c 205 SUPERFAMILY SSF51569 2 204 8.24E-59 T 28-03-2018 CI104_RS22585 87f0e678dc0ca3d8cdb321f461c3f7e3 181 Hamap MF_00045 Oligoribonuclease [orn]. 3 181 45.048 T 28-03-2018 IPR022894 Oligoribonuclease GO:0000175 CI104_RS22585 87f0e678dc0ca3d8cdb321f461c3f7e3 181 SMART SM00479 7 180 1.2E-22 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS22585 87f0e678dc0ca3d8cdb321f461c3f7e3 181 SUPERFAMILY SSF53098 3 180 1.04E-48 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS22585 87f0e678dc0ca3d8cdb321f461c3f7e3 181 Pfam PF00929 Exonuclease 9 170 7.8E-37 T 28-03-2018 IPR013520 Exonuclease, RNase T/DNA polymerase III CI104_RS22585 87f0e678dc0ca3d8cdb321f461c3f7e3 181 Gene3D G3DSA:3.30.420.10 2 181 1.1E-26 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 SMART SM00869 502 775 1.8E-43 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 Gene3D G3DSA:2.160.20.20 3 450 9.8E-43 T 28-03-2018 IPR012332 P22 tailspike C-terminal domain-like CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 Gene3D G3DSA:2.40.128.130 461 786 3.2E-50 T 28-03-2018 CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 Pfam PF03797 Autotransporter beta-domain 505 764 1.2E-49 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 TIGRFAM TIGR01414 autotrans_barl: outer membrane autotransporter barrel domain 340 786 3.8E-115 T 28-03-2018 IPR006315 Outer membrane autotransporter barrel GO:0019867 CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 SUPERFAMILY SSF51126 16 449 2.64E-26 T 28-03-2018 IPR011050 Pectin lyase fold/virulence factor CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 SUPERFAMILY SSF103515 466 786 4.18E-49 T 28-03-2018 IPR005546 Autotransporter beta-domain CI104_RS08535 42de28ff46c95440d6ab9e05f95265b7 786 Pfam PF03212 Pertactin 342 445 5.4E-7 T 28-03-2018 IPR004899 Pertactin, central region CI104_RS15240 39525ae7882798264c411daf5e24dbe3 79 Pfam PF07351 Protein of unknown function (DUF1480) 1 78 4.6E-40 T 28-03-2018 IPR009950 Protein of unknown function DUF1480 CI104_RS15240 39525ae7882798264c411daf5e24dbe3 79 ProDom PD060427 YEBV CYTOPLASMIC Y1856 ESCHERICHIA ECS2546 YPO1694 COLI STY1982 SIMILAR 2 79 2.0E-38 T 28-03-2018 IPR009950 Protein of unknown function DUF1480 CI104_RS11375 436fbca718039041a36f66d50b4d93ae 50 Gene3D G3DSA:3.40.718.10 1 50 5.6E-8 T 28-03-2018 CI104_RS11375 436fbca718039041a36f66d50b4d93ae 50 Pfam PF00180 Isocitrate/isopropylmalate dehydrogenase 1 46 1.1E-7 T 28-03-2018 IPR024084 Isopropylmalate dehydrogenase-like domain GO:0016616|GO:0055114 Reactome: R-HSA-71403 CI104_RS11375 436fbca718039041a36f66d50b4d93ae 50 SUPERFAMILY SSF53659 1 50 2.44E-10 T 28-03-2018 CI104_RS02235 47dce23a78e4b0aef5a8729f5ca669fa 190 SUPERFAMILY SSF55821 4 187 3.66E-56 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS02235 47dce23a78e4b0aef5a8729f5ca669fa 190 Gene3D G3DSA:3.90.870.10 1 188 6.7E-52 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS02235 47dce23a78e4b0aef5a8729f5ca669fa 190 Hamap MF_01852 Threonylcarbamoyl-AMP synthase [tsaC]. 7 188 40.734 T 28-03-2018 IPR023535 Threonylcarbamoyl-AMP synthase GO:0002949|GO:0005524 CI104_RS02235 47dce23a78e4b0aef5a8729f5ca669fa 190 Pfam PF01300 Telomere recombination 15 190 3.0E-42 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CI104_RS24405 4a1fb63af172d7fb572ec9fea6374c27 445 Gene3D G3DSA:3.40.50.410 57 247 7.8E-34 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS24405 4a1fb63af172d7fb572ec9fea6374c27 445 SUPERFAMILY SSF53300 52 236 5.15E-34 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS24405 4a1fb63af172d7fb572ec9fea6374c27 445 SMART SM00327 65 244 1.6E-22 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS24405 4a1fb63af172d7fb572ec9fea6374c27 445 Pfam PF00092 von Willebrand factor type A domain 67 236 4.8E-19 T 28-03-2018 IPR002035 von Willebrand factor, type A CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 Gene3D G3DSA:2.40.230.10 33 289 6.8E-95 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 SUPERFAMILY SSF56931 39 288 3.27E-91 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 81 98 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 126 145 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 103 119 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 171 189 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 236 253 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 203 221 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 258 278 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 PRINTS PR01486 Bacterial phospholipase A1 protein signature 156 170 5.6E-87 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS24765 3576f0dcd83abb667ab698b0f141d3c1 289 Pfam PF02253 Phospholipase A1 43 285 8.7E-89 T 28-03-2018 IPR003187 Phospholipase A1 GO:0004620|GO:0006629|GO:0016020 KEGG: 00564+3.1.1.32+3.1.1.4|KEGG: 00565+3.1.1.4|KEGG: 00590+3.1.1.4|KEGG: 00591+3.1.1.4|KEGG: 00592+3.1.1.32+3.1.1.4|MetaCyc: PWY-6803|MetaCyc: PWY-7409|MetaCyc: PWY-7416|MetaCyc: PWY-7417|MetaCyc: PWY-7783 CI104_RS19135 d7ddeb83b220e1dd0a71aea06d925b74 269 SUPERFAMILY SSF110710 1 266 5.49E-75 T 28-03-2018 CI104_RS19135 d7ddeb83b220e1dd0a71aea06d925b74 269 Pfam PF02522 Aminoglycoside 3-N-acetyltransferase 23 262 3.1E-58 T 28-03-2018 IPR003679 Aminoglycoside N(3)-acetyltransferase GO:0046353|GO:0046677 CI104_RS08730 16e185e735b14783aca874692a5c5586 162 Pfam PF10767 Protein of unknown function (DUF2593) 21 160 3.4E-61 T 28-03-2018 IPR019703 Protein of unknown function DUF2593 CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 SUPERFAMILY SSF54427 25 129 2.8E-36 T 28-03-2018 IPR032710 NTF2-like domain CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 Hamap MF_00612 UPF0225 protein YchJ [ychJ]. 1 128 29.561 T 28-03-2018 IPR023006 Uncharacterised protein family UPF0225 CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 SUPERFAMILY SSF103642 132 151 1.11E-7 T 28-03-2018 CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 Pfam PF02810 SEC-C motif 134 151 1.7E-10 T 28-03-2018 IPR004027 SEC-C motif CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 Pfam PF02810 SEC-C motif 3 19 8.4E-5 T 28-03-2018 IPR004027 SEC-C motif CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 Gene3D G3DSA:3.10.450.50 3 130 2.6E-42 T 28-03-2018 CI104_RS14325 2a062332754aef0df0cd7bac5b18602f 151 Gene3D G3DSA:3.10.450.50 136 151 0.18 T 28-03-2018 CI104_RS10425 3651fefb448471a4754077212d3973ba 138 Pfam PF00460 Flagella basal body rod protein 9 39 2.3E-12 T 28-03-2018 IPR001444 Flagellar basal body rod protein, N-terminal GO:0071973 CI104_RS10425 3651fefb448471a4754077212d3973ba 138 ProSitePatterns PS00588 Flagella basal body rod proteins signature. 15 35 - T 28-03-2018 IPR019776 Flagellar basal body rod protein, conserved site CI104_RS10425 3651fefb448471a4754077212d3973ba 138 PIRSF PIRSF002889 1 137 8.2E-44 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CI104_RS10425 3651fefb448471a4754077212d3973ba 138 TIGRFAM TIGR01396 FlgB: flagellar basal-body rod protein FlgB 6 135 3.1E-47 T 28-03-2018 IPR006300 Flagellar basal-body rod protein FlgB GO:0030694|GO:0071973 CI104_RS11150 191f7ca5defe74c7062729151d237c80 640 Pfam PF05876 Phage terminase large subunit (GpA) 39 600 2.0E-161 T 28-03-2018 IPR008866 Bacteriophage lambda, GpA CI104_RS21760 8abc8e317a152e41c9df1897fa875b45 157 ProDom PD034160 PRECURSOR SIGNAL YFJT INTERGENIC-REGION C0283 YKFB 3 150 2.0E-39 T 28-03-2018 CI104_RS27670 102e613673a2a0e19c3de51e7541000b 143 Pfam PF10624 Plasmid conjugative transfer entry exclusion protein TraS 1 139 2.0E-40 T 28-03-2018 IPR018898 Plasmid conjugative transfer entry exclusion protein TraS CI104_RS02180 d08633d040042ce9d82d91b7e244e120 122 Pfam PF09350 Domain of unknown function (DUF1992) 7 73 1.4E-22 T 28-03-2018 IPR018961 DnaJ homologue, subfamily C, member 28, conserved domain CI104_RS19870 281c0f1a1b5e21d8aa04c3e017263b81 114 Pfam PF11756 Nitrous oxide-stimulated promoter 4 106 6.6E-39 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA CI104_RS19870 281c0f1a1b5e21d8aa04c3e017263b81 114 ProDom PD075772 YGBA ECS3588 CYTOPLASMIC UVRA STM2860 AMIDOPHOSPHORIBOSYLTRANSFERASE VVA0912 SO0324 VPA0976 CPE0229 1 97 1.0E-48 T 28-03-2018 IPR020483 Uncharacterised protein family YgbA CI104_RS27170 41b715e3adfff39ece29a4939c02138e 325 Pfam PF01051 Initiator Replication protein 10 265 3.6E-30 T 28-03-2018 IPR000525 Initiator Rep protein GO:0003887|GO:0005727|GO:0006270 CI104_RS27170 41b715e3adfff39ece29a4939c02138e 325 Gene3D G3DSA:1.10.10.10 184 270 0.0019 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27170 41b715e3adfff39ece29a4939c02138e 325 Gene3D G3DSA:1.10.10.10 39 183 1.4E-4 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06470 7bd4e2e678690a62690d1dcce734b448 351 Gene3D G3DSA:3.40.50.1100 142 330 4.9E-39 T 28-03-2018 CI104_RS06470 7bd4e2e678690a62690d1dcce734b448 351 Gene3D G3DSA:3.40.50.1100 31 141 3.3E-22 T 28-03-2018 CI104_RS06470 7bd4e2e678690a62690d1dcce734b448 351 SUPERFAMILY SSF53686 7 333 1.23E-70 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS06470 7bd4e2e678690a62690d1dcce734b448 351 Pfam PF00291 Pyridoxal-phosphate dependent enzyme 23 315 3.7E-43 T 28-03-2018 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 Gene3D G3DSA:3.30.1390.10 51 121 7.5E-31 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 SUPERFAMILY SSF54736 50 121 3.84E-25 T 28-03-2018 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 ProDom PD001326 RIBOSOMAL L7/L12 50S RIBONUCLEOPROTEIN CHLOROPLAST L12 PLASTID DIRECT SEQUENCING PEPTIDE 56 121 8.0E-28 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 Gene3D G3DSA:1.20.5.710 2 50 1.1E-17 T 28-03-2018 CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 Pfam PF16320 Ribosomal protein L7/L12 dimerisation domain 4 49 1.1E-15 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 Pfam PF00542 Ribosomal protein L7/L12 C-terminal domain 55 121 3.8E-31 T 28-03-2018 IPR013823 Ribosomal protein L7/L12, C-terminal GO:0003735|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 SUPERFAMILY SSF48300 3 57 3.53E-16 T 28-03-2018 IPR008932 Ribosomal protein L7/L12, oligomerisation GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 TIGRFAM TIGR00855 L12: ribosomal protein bL12 1 121 2.4E-48 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS23770 abd935bea3fa5a127881c846f54dd2fa 121 Hamap MF_00368 50S ribosomal protein L7/L12 [rplL]. 2 121 25.484 T 28-03-2018 IPR000206 Ribosomal protein L7/L12 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS18240 d0a4f92ff8b2b1420a56645100cd4e5a 300 Pfam PF05985 Ethanolamine ammonia-lyase light chain (EutC) 71 298 1.2E-79 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CI104_RS18240 d0a4f92ff8b2b1420a56645100cd4e5a 300 Hamap MF_00601 Ethanolamine ammonia-lyase light chain [eutC]. 62 299 41.016 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CI104_RS18240 d0a4f92ff8b2b1420a56645100cd4e5a 300 PIRSF PIRSF018982 51 300 5.6E-103 T 28-03-2018 IPR009246 Ethanolamine ammonia-lyase light chain GO:0006520|GO:0008851 KEGG: 00564+4.3.1.7 CI104_RS19545 60d2b9f16476c85af2ce22b40922c07c 114 SUPERFAMILY SSF159894 1 111 1.7E-59 T 28-03-2018 CI104_RS19545 60d2b9f16476c85af2ce22b40922c07c 114 Pfam PF09400 Protein of unknown function (DUF2002) 1 110 7.6E-60 T 28-03-2018 IPR018994 Protein of unknown function DUF2002 CI104_RS19725 678a1c3565960998212e43f9485f15a1 120 Gene3D G3DSA:2.40.33.40 3 118 9.2E-39 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS19725 678a1c3565960998212e43f9485f15a1 120 SUPERFAMILY SSF141530 4 118 7.85E-36 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS19725 678a1c3565960998212e43f9485f15a1 120 ProDom PD015842 PTS IIA COMPONENT GLUCITOL/SORBITOL-SPECIFIC SYSTEM ENZYME TRANSFERASE SYSTEM PHOSPHOTRANSFERASE EIIA 6 118 1.0E-53 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS19725 678a1c3565960998212e43f9485f15a1 120 Pfam PF03829 PTS system glucitol/sorbitol-specific IIA component 4 113 1.1E-37 T 28-03-2018 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component GO:0005737|GO:0008982|GO:0009401 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS11690 4d6543bea21d8147d0a0555b06ecea29 213 SUPERFAMILY SSF52499 2 208 2.22E-54 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS11690 4d6543bea21d8147d0a0555b06ecea29 213 Pfam PF00857 Isochorismatase family 5 207 7.9E-37 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS11690 4d6543bea21d8147d0a0555b06ecea29 213 Gene3D G3DSA:3.40.50.850 1 212 1.5E-63 T 28-03-2018 CI104_RS07965 d0ab5f3b4083187a2af7be29a359ec6b 421 Pfam PF07005 Putative sugar-binding N-terminal domain 6 232 8.9E-69 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CI104_RS07965 d0ab5f3b4083187a2af7be29a359ec6b 421 Pfam PF17042 Putative nucleotide-binding of sugar-metabolising enzyme 257 413 4.0E-38 T 28-03-2018 IPR031475 Putative nucleotide-binding C-terminal domain CI104_RS07965 d0ab5f3b4083187a2af7be29a359ec6b 421 Gene3D G3DSA:3.40.50.10840 5 240 3.9E-75 T 28-03-2018 IPR010737 Putative sugar-binding, N-terminal domain CI104_RS07965 d0ab5f3b4083187a2af7be29a359ec6b 421 SUPERFAMILY SSF142764 6 418 4.97E-125 T 28-03-2018 CI104_RS07965 d0ab5f3b4083187a2af7be29a359ec6b 421 Gene3D G3DSA:3.40.50.2300 255 416 0.072 T 28-03-2018 CI104_RS10970 cee07ea0cd88ddaad5dff7d3fb046d20 373 Pfam PF08007 Cupin superfamily protein 10 310 2.5E-104 T 28-03-2018 IPR003347 JmjC domain CI104_RS10970 cee07ea0cd88ddaad5dff7d3fb046d20 373 SUPERFAMILY SSF51197 7 292 1.02E-74 T 28-03-2018 CI104_RS10970 cee07ea0cd88ddaad5dff7d3fb046d20 373 Gene3D G3DSA:2.60.120.650 2 206 1.3E-28 T 28-03-2018 CI104_RS10970 cee07ea0cd88ddaad5dff7d3fb046d20 373 SMART SM00558 92 215 6.5E-11 T 28-03-2018 IPR003347 JmjC domain CI104_RS15935 25e3c697fa3a008802e6febeb1633d6e 58 Pfam PF09926 Uncharacterized small protein (DUF2158) 9 47 1.5E-7 T 28-03-2018 IPR019226 Protein of unknown function DUF2158 CI104_RS09785 9ca5103ba67a7b6dca7957abcfe70a7d 456 Pfam PF12486 Type VI secretion system, EvfB, or VasL 303 438 2.6E-44 T 28-03-2018 IPR021069 ImpA, C-terminal CI104_RS09785 9ca5103ba67a7b6dca7957abcfe70a7d 456 Pfam PF06812 ImpA, N-terminal, type VI secretion system 10 112 7.6E-19 T 28-03-2018 IPR010657 ImpA, N-terminal CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 Gene3D G3DSA:1.20.120.220 95 271 1.0E-53 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 ProSitePatterns PS00449 ATP synthase a subunit signature. 206 215 - T 28-03-2018 IPR023011 ATP synthase, F0 complex, subunit A, active site Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 PRINTS PR00123 ATP synthase A subunit signature 104 120 3.2E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 PRINTS PR00123 ATP synthase A subunit signature 203 225 3.2E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 PRINTS PR00123 ATP synthase A subunit signature 251 266 3.2E-15 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 SUPERFAMILY SSF81336 95 265 2.22E-49 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 TIGRFAM TIGR01131 ATP_synt_6_or_A: ATP synthase F0, A subunit 38 266 1.2E-43 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 Pfam PF00119 ATP synthase A chain 46 265 2.1E-55 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS25155 b78509c7aa36d32f8c43c326aa6352a5 271 Hamap MF_01393 ATP synthase subunit a [atpB]. 12 271 16.099 T 28-03-2018 IPR000568 ATP synthase, F0 complex, subunit A GO:0015078|GO:0015986|GO:0045263 Reactome: R-HSA-163210|Reactome: R-HSA-8949613 CI104_RS02935 7c42b56dbff11d9caa2c7410917dc79e 335 Pfam PF00296 Luciferase-like monooxygenase 8 304 4.2E-36 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CI104_RS02935 7c42b56dbff11d9caa2c7410917dc79e 335 SUPERFAMILY SSF51679 6 327 2.36E-86 T 28-03-2018 IPR011251 Luciferase-like domain GO:0016705|GO:0055114 CI104_RS02935 7c42b56dbff11d9caa2c7410917dc79e 335 Gene3D G3DSA:3.20.20.30 6 329 6.3E-72 T 28-03-2018 CI104_RS02935 7c42b56dbff11d9caa2c7410917dc79e 335 TIGRFAM TIGR03558 oxido_grp_1: luciferase family oxidoreductase, group 1 8 328 1.6E-134 T 28-03-2018 IPR019949 Luciferase family oxidoreductase, group 1 CI104_RS18385 0c8684dc04c0a40340fa72c4ce082f80 288 Pfam PF04228 Putative neutral zinc metallopeptidase 1 284 4.4E-141 T 28-03-2018 IPR007343 Uncharacterised protein family, zinc metallopeptidase putative CI104_RS16240 68042583c27be296bedf2db497c69ee6 91 Gene3D G3DSA:2.40.50.220 1 91 2.6E-31 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS16240 68042583c27be296bedf2db497c69ee6 91 Pfam PF03319 Ethanolamine utilisation protein EutN/carboxysome 1 87 1.6E-30 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS16240 68042583c27be296bedf2db497c69ee6 91 ProDom PD012510 UTILIZATION ETHANOLAMINE CARBOXYSOME CCML PEPTIDE EUTN/CARBOXYSOME STRUCTURAL EUTN A B 11 87 7.0E-16 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS16240 68042583c27be296bedf2db497c69ee6 91 SUPERFAMILY SSF159133 1 89 5.49E-27 T 28-03-2018 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CI104_RS12410 3d6c5e39d29430ff520dbe2d4dc6bced 199 Pfam PF00440 Bacterial regulatory proteins, tetR family 14 55 5.4E-11 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS12410 3d6c5e39d29430ff520dbe2d4dc6bced 199 SUPERFAMILY SSF48498 81 194 4.04E-21 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS12410 3d6c5e39d29430ff520dbe2d4dc6bced 199 Gene3D G3DSA:1.10.357.10 61 195 1.0E-23 T 28-03-2018 CI104_RS12410 3d6c5e39d29430ff520dbe2d4dc6bced 199 Pfam PF16925 Bacterial transcriptional repressor C-terminal 84 188 4.8E-10 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS12410 3d6c5e39d29430ff520dbe2d4dc6bced 199 Gene3D G3DSA:1.10.10.60 7 60 6.8E-14 T 28-03-2018 CI104_RS12410 3d6c5e39d29430ff520dbe2d4dc6bced 199 SUPERFAMILY SSF46689 8 79 4.1E-15 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS06795 5a3129150224156461ba05d809d40c69 157 Pfam PF05926 Phage head completion protein (GPL) 25 157 1.7E-38 T 28-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 CI104_RS05740 5ecab5c4ed7826fcee1e7970c860a7d8 579 Pfam PF00771 FHIPEP family 9 570 4.8E-187 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS05740 5ecab5c4ed7826fcee1e7970c860a7d8 579 ProSitePatterns PS00994 Bacterial export FHIPEP family signature. 24 47 - T 28-03-2018 IPR025505 FHIPEP conserved site CI104_RS05740 5ecab5c4ed7826fcee1e7970c860a7d8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 19 35 2.2E-36 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS05740 5ecab5c4ed7826fcee1e7970c860a7d8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 119 133 2.2E-36 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS05740 5ecab5c4ed7826fcee1e7970c860a7d8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 68 85 2.2E-36 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS05740 5ecab5c4ed7826fcee1e7970c860a7d8 579 PRINTS PR00949 Type III secretion system inner membrane A protein family signature 38 56 2.2E-36 T 28-03-2018 IPR001712 Type III secretion system FHIPEP GO:0009306|GO:0016020 CI104_RS22975 9bdac4ee8e0520152d66beffa9fb1092 84 Pfam PF04193 PQ loop repeat 4 56 2.7E-10 T 28-03-2018 IPR006603 PQ-loop repeat CI104_RS24120 9ad6e0c8338ad77d785536dc6fa6104d 161 Gene3D G3DSA:3.50.30.40 1 159 3.1E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CI104_RS24120 9ad6e0c8338ad77d785536dc6fa6104d 161 TIGRFAM TIGR01935 NOT-MenG: RraA family 5 154 1.2E-62 T 28-03-2018 IPR010203 Regulator of ribonuclease activity A GO:0008428|GO:0051252 CI104_RS24120 9ad6e0c8338ad77d785536dc6fa6104d 161 Pfam PF03737 Aldolase/RraA 5 152 6.3E-36 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CI104_RS24120 9ad6e0c8338ad77d785536dc6fa6104d 161 TIGRFAM TIGR02998 RraA_entero: regulator of ribonuclease activity A 1 161 2.9E-90 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CI104_RS24120 9ad6e0c8338ad77d785536dc6fa6104d 161 SUPERFAMILY SSF89562 2 158 4.45E-44 T 28-03-2018 IPR005493 Ribonuclease E inhibitor RraA/RraA-like protein CI104_RS24120 9ad6e0c8338ad77d785536dc6fa6104d 161 Hamap MF_00471 Regulator of ribonuclease activity A [rraA]. 1 161 47.242 T 28-03-2018 IPR014339 Regulator of ribonuclease activity A, gammaproteobacteria GO:0008428|GO:0051252 CI104_RS05105 fc2274ae6bdfc946dc0c8eab743d7000 560 Gene3D G3DSA:2.40.160.50 180 560 7.1E-43 T 28-03-2018 CI104_RS05105 fc2274ae6bdfc946dc0c8eab743d7000 560 Gene3D G3DSA:3.10.20.310 78 151 2.3E-13 T 28-03-2018 CI104_RS05105 fc2274ae6bdfc946dc0c8eab743d7000 560 Pfam PF17287 POTRA domain 152 206 2.6E-15 T 28-03-2018 IPR035251 ShlB, POTRA domain CI104_RS05105 fc2274ae6bdfc946dc0c8eab743d7000 560 Pfam PF03865 Haemolysin secretion/activation protein ShlB/FhaC/HecB 211 524 2.0E-100 T 28-03-2018 IPR005565 Haemolysin activator HlyB, C-terminal CI104_RS05105 fc2274ae6bdfc946dc0c8eab743d7000 560 Pfam PF08479 POTRA domain, ShlB-type 76 151 9.7E-21 T 28-03-2018 IPR013686 Polypeptide-transport-associated, ShlB-type CI104_RS05105 fc2274ae6bdfc946dc0c8eab743d7000 560 PIRSF PIRSF029745 3 560 1.0E-144 T 28-03-2018 IPR027282 Two partner secretion pathway transporter GO:0015031 CI104_RS15945 00756a20f4380d27be7a07044e9145e0 306 SUPERFAMILY SSF103481 43 144 7.59E-11 T 28-03-2018 CI104_RS15945 00756a20f4380d27be7a07044e9145e0 306 Pfam PF00892 EamA-like transporter family 13 140 3.9E-22 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS15945 00756a20f4380d27be7a07044e9145e0 306 Pfam PF00892 EamA-like transporter family 150 284 1.3E-18 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS15945 00756a20f4380d27be7a07044e9145e0 306 SUPERFAMILY SSF103481 186 287 1.83E-11 T 28-03-2018 CI104_RS11705 7860ba9be1884604524d6985e5cbf86c 183 PIRSF PIRSF000232 1 182 1.2E-68 T 28-03-2018 IPR026021 Putative NAD(P)H nitroreductase YdjA-like CI104_RS11705 7860ba9be1884604524d6985e5cbf86c 183 Gene3D G3DSA:3.40.109.10 1 181 5.7E-32 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS11705 7860ba9be1884604524d6985e5cbf86c 183 SUPERFAMILY SSF55469 1 167 1.44E-38 T 28-03-2018 IPR000415 Nitroreductase-like GO:0016491 Reactome: R-HSA-209968 CI104_RS11705 7860ba9be1884604524d6985e5cbf86c 183 Pfam PF00881 Nitroreductase family 9 161 3.5E-24 T 28-03-2018 IPR029479 Nitroreductase Reactome: R-HSA-209968 CI104_RS00115 3d4b206d991d11b7853ccc07d972cd0b 192 ProDom PD968187 BETA-DEFENSIN ANTIBIOTIC PRECURSOR ANTIMICROBIAL DEFENSIN BETA SIGNAL DEFENSIN BD-32 DEFB-32 30 189 1.0E-50 T 28-03-2018 CI104_RS08500 096f993e57d2a33591772b8d65fc9ffe 368 Pfam PF03600 Citrate transporter 20 304 3.3E-26 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CI104_RS00320 2d68587ef491ffbfb473ca18300d2ba6 247 TIGRFAM TIGR03581 EF_0839: conserved hypothetical protein EF_0839/AHA_3917 7 244 9.0E-104 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS00320 2d68587ef491ffbfb473ca18300d2ba6 247 Pfam PF07071 KDGP aldolase 7 226 1.6E-92 T 28-03-2018 IPR010763 2-dehydro-3-deoxy-phosphogluconate aldolase KEGG: 00030+4.1.2.14|MetaCyc: PWY-2221|MetaCyc: PWY-6507|MetaCyc: PWY-7242|MetaCyc: PWY-7310|MetaCyc: PWY-7562 CI104_RS00320 2d68587ef491ffbfb473ca18300d2ba6 247 Gene3D G3DSA:3.20.20.70 3 247 1.7E-103 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS20850 5c123eacf648b52396476943120c4557 141 Gene3D G3DSA:3.40.30.10 1 141 2.4E-44 T 28-03-2018 CI104_RS20850 5c123eacf648b52396476943120c4557 141 TIGRFAM TIGR00014 arsC: arsenate reductase (glutaredoxin) 4 116 1.6E-40 T 28-03-2018 IPR006659 Arsenate reductase GO:0008794|GO:0055114 MetaCyc: PWY-4202|MetaCyc: PWY-4621 CI104_RS20850 5c123eacf648b52396476943120c4557 141 SUPERFAMILY SSF52833 3 135 5.92E-39 T 28-03-2018 IPR012336 Thioredoxin-like fold CI104_RS20850 5c123eacf648b52396476943120c4557 141 Pfam PF03960 ArsC family 7 114 1.2E-19 T 28-03-2018 IPR006660 Arsenate reductase-like CI104_RS06205 bca259e26dccd49f32d769dab45bb087 147 SUPERFAMILY SSF55804 4 144 4.19E-29 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS06205 bca259e26dccd49f32d769dab45bb087 147 Gene3D G3DSA:3.40.930.10 2 146 1.4E-23 T 28-03-2018 IPR016152 Phosphotransferase/anion transporter GO:0005215|GO:0006810 Reactome: R-HSA-425381 CI104_RS06205 bca259e26dccd49f32d769dab45bb087 147 Pfam PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 4 144 4.3E-24 T 28-03-2018 IPR002178 PTS EIIA type-2 domain CI104_RS21700 7fd366d3def44f606994e92aee525dac 332 Gene3D G3DSA:1.10.3470.10 11 312 6.8E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS21700 7fd366d3def44f606994e92aee525dac 332 Pfam PF02653 Branched-chain amino acid transport system / permease component 38 307 1.5E-47 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS26975 27b0219b614e44926fb8319809b7b71c 307 Pfam PF13737 Transposase DDE domain 19 130 2.4E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS00160 215c5ae09678ffe3b0610f50d41a10c1 32 Pfam PF08049 IlvB leader peptide 1 32 3.6E-16 T 28-03-2018 IPR012566 IlvB leader peptide CI104_RS22210 efbb796b8454a7fa3638e21e24d674e2 129 SUPERFAMILY SSF47175 25 129 5.38E-34 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CI104_RS22210 efbb796b8454a7fa3638e21e24d674e2 129 PIRSF PIRSF000029 1 129 2.1E-59 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CI104_RS22210 efbb796b8454a7fa3638e21e24d674e2 129 Pfam PF07361 Cytochrome b562 25 129 1.5E-31 T 28-03-2018 IPR009155 Cytochrome b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900|GO:0042597 CI104_RS22210 efbb796b8454a7fa3638e21e24d674e2 129 Gene3D G3DSA:1.20.120.10 25 129 6.4E-21 T 28-03-2018 CI104_RS16975 62cc044028b840dde5ebc4746925bda2 84 Pfam PF03692 Putative zinc- or iron-chelating domain 2 55 7.4E-6 T 28-03-2018 IPR005358 Putative zinc- or iron-chelating domain containing protein CI104_RS01185 2d4375170eb6e8cf068845ade7ddcafc 111 Hamap MF_01088 Universal stress protein B [uspB]. 1 107 39.727 T 28-03-2018 IPR019598 Universal stress protein B CI104_RS01185 2d4375170eb6e8cf068845ade7ddcafc 111 Pfam PF10625 Universal stress protein B (UspB) 1 107 2.3E-54 T 28-03-2018 IPR019598 Universal stress protein B CI104_RS05410 84d04919bee28c5006597dd31496dedd 139 Gene3D G3DSA:3.30.160.20 1 139 9.0E-42 T 28-03-2018 CI104_RS05410 84d04919bee28c5006597dd31496dedd 139 ProSitePatterns PS00745 Prokaryotic-type class I peptide chain release factors signature. 21 37 - T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CI104_RS05410 84d04919bee28c5006597dd31496dedd 139 Pfam PF00472 RF-1 domain 8 132 3.3E-25 T 28-03-2018 IPR000352 Peptide chain release factor class I/class II GO:0003747|GO:0006415 CI104_RS05410 84d04919bee28c5006597dd31496dedd 139 SUPERFAMILY SSF75620 8 113 1.41E-13 T 28-03-2018 CI104_RS04595 87385b169ac2a76ff7069223ac0d8a6d 142 Pfam PF03610 PTS system fructose IIA component 4 102 1.4E-18 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS04595 87385b169ac2a76ff7069223ac0d8a6d 142 SUPERFAMILY SSF53062 1 122 2.75E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS04595 87385b169ac2a76ff7069223ac0d8a6d 142 Gene3D G3DSA:3.40.50.510 1 132 1.8E-27 T 28-03-2018 IPR004701 Phosphotransferase system, mannose-type IIA component GO:0009401|GO:0016021 CI104_RS22905 e393673cbc7355ef280d321bd9c779b3 824 ProSitePatterns PS01151 Fimbrial biogenesis outer membrane usher protein signature. 302 312 - T 28-03-2018 IPR018030 Fimbrial membrane usher, conserved site CI104_RS22905 e393673cbc7355ef280d321bd9c779b3 824 Pfam PF00577 Outer membrane usher protein 191 740 4.9E-175 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS22905 e393673cbc7355ef280d321bd9c779b3 824 Pfam PF13954 PapC N-terminal domain 32 173 2.8E-36 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS22905 e393673cbc7355ef280d321bd9c779b3 824 SUPERFAMILY SSF141729 31 147 2.75E-27 T 28-03-2018 CI104_RS22905 e393673cbc7355ef280d321bd9c779b3 824 Pfam PF13953 PapC C-terminal domain 751 807 2.9E-13 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS27950 1252fdb000261df9f8cdbc4f633ca922 712 SUPERFAMILY SSF52540 335 494 9.34E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27950 1252fdb000261df9f8cdbc4f633ca922 712 SUPERFAMILY SSF52540 3 146 9.34E-18 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS27950 1252fdb000261df9f8cdbc4f633ca922 712 Gene3D G3DSA:3.40.50.300 2 502 9.9E-21 T 28-03-2018 CI104_RS27950 1252fdb000261df9f8cdbc4f633ca922 712 ProSitePatterns PS00211 ABC transporters family signature. 422 436 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS18835 0f09e21a02370a36455d16dd37e537a2 159 Pfam PF04246 Positive regulator of sigma(E), RseC/MucC 8 139 4.3E-33 T 28-03-2018 IPR007359 Positive regulator of sigma(E), RseC/MucC CI104_RS18835 0f09e21a02370a36455d16dd37e537a2 159 PIRSF PIRSF004923 1 151 2.0E-41 T 28-03-2018 IPR026268 Protein RseC CI104_RS13375 47417400495540ab6005976cf629a4fa 57 Pfam PF10753 Toxin GhoT_OrtT 4 57 2.1E-27 T 28-03-2018 IPR019689 Toxin GhoT/OrtT CI104_RS10235 ae085ebba5938a033427c2bffdcd1504 277 Gene3D G3DSA:3.40.50.10070 44 210 1.0E-17 T 28-03-2018 CI104_RS10235 ae085ebba5938a033427c2bffdcd1504 277 Pfam PF03783 Curli production assembly/transport component CsgG 41 255 5.6E-80 T 28-03-2018 IPR005534 Curli production assembly/transport component CsgG GO:0030288 CI104_RS17420 3f611341a9c8eeed0a97436c4ddb5bad 551 Pfam PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase 9 237 7.7E-49 T 28-03-2018 IPR003342 Glycosyl transferase family 39/83 GO:0000030|GO:0006493|GO:0016020 Reactome: R-HSA-5173105 CI104_RS17420 3f611341a9c8eeed0a97436c4ddb5bad 551 Hamap MF_01165 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase [arnT]. 1 551 42.464 T 28-03-2018 IPR022839 Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase GO:0016763 CI104_RS25825 689265b728cf8e071bcf6f96892774b7 103 Pfam PF06117 Enterobacterial protein of unknown function (DUF957) 10 58 5.1E-13 T 28-03-2018 IPR009301 Protein of unknown function DUF957 CI104_RS11560 f537ad5ceba5efefb34820b5f35c9281 169 Pfam PF04463 Protein of unknown function (DUF523) 5 150 1.6E-38 T 28-03-2018 IPR007553 Domain of unknown function DUF523 CI104_RS20530 dd48104c09fb75556cf04f8ec7bcf088 460 Pfam PF07969 Amidohydrolase family 170 435 3.1E-11 T 28-03-2018 IPR013108 Amidohydrolase 3 CI104_RS20530 dd48104c09fb75556cf04f8ec7bcf088 460 Gene3D G3DSA:2.30.40.10 419 459 0.25 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20530 dd48104c09fb75556cf04f8ec7bcf088 460 SUPERFAMILY SSF51556 118 409 1.55E-72 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS20530 dd48104c09fb75556cf04f8ec7bcf088 460 Gene3D G3DSA:3.20.20.140 132 406 3.8E-28 T 28-03-2018 CI104_RS20530 dd48104c09fb75556cf04f8ec7bcf088 460 SUPERFAMILY SSF51338 81 124 1.79E-5 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20530 dd48104c09fb75556cf04f8ec7bcf088 460 Gene3D G3DSA:2.30.40.10 58 131 4.0E-8 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS11360 d0078cc1c4089899464af7d62300194e 79 Pfam PF06183 DinI-like family 17 76 6.8E-23 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS11360 d0078cc1c4089899464af7d62300194e 79 Gene3D G3DSA:3.30.910.10 1 76 5.0E-29 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS11360 d0078cc1c4089899464af7d62300194e 79 SUPERFAMILY SSF54857 1 77 3.4E-24 T 28-03-2018 IPR010391 DNA damage-inducible protein DinI-like CI104_RS27035 5f092075bec8f635031cf841cd04a395 98 SUPERFAMILY SSF143011 1 87 1.96E-8 T 28-03-2018 IPR035095 Toxin RelE-like domain CI104_RS27035 5f092075bec8f635031cf841cd04a395 98 Gene3D G3DSA:3.30.2310.20 1 94 1.6E-18 T 28-03-2018 CI104_RS27035 5f092075bec8f635031cf841cd04a395 98 Pfam PF05015 RelE-like toxin of type II toxin-antitoxin system HigB 4 86 3.2E-19 T 28-03-2018 IPR007711 Toxin HigB-1 CI104_RS10850 374475788cba21e548004e29323fda64 367 Pfam PF04865 Baseplate J-like protein 70 326 3.1E-73 T 28-03-2018 IPR006949 Baseplate protein J-like CI104_RS10850 374475788cba21e548004e29323fda64 367 PIRSF PIRSF020481 1 366 1.8E-96 T 28-03-2018 IPR014507 Baseplate assembly protein J, predicted CI104_RS24325 f686791ec12c78d907e557193409574e 219 Pfam PF03591 AzlC protein 19 154 3.3E-30 T 28-03-2018 IPR011606 Branched-chain amino acid transport, permease CI104_RS18310 504ee092fcd27cb2fb466793769c6326 355 Gene3D G3DSA:3.40.50.2000 195 352 2.6E-16 T 28-03-2018 CI104_RS18310 504ee092fcd27cb2fb466793769c6326 355 SUPERFAMILY SSF53756 31 348 2.41E-27 T 28-03-2018 CI104_RS18310 504ee092fcd27cb2fb466793769c6326 355 Pfam PF01075 Glycosyltransferase family 9 (heptosyltransferase) 274 318 8.9E-6 T 28-03-2018 IPR002201 Glycosyl transferase, family 9 GO:0008152|GO:0016757 CI104_RS09410 9acc482a6ed8916bdd45932d26371027 344 Gene3D G3DSA:3.40.50.300 1 343 1.4E-32 T 28-03-2018 CI104_RS09410 9acc482a6ed8916bdd45932d26371027 344 Pfam PF13614 AAA domain 2 190 2.1E-27 T 28-03-2018 IPR025669 AAA domain CI104_RS09410 9acc482a6ed8916bdd45932d26371027 344 SUPERFAMILY SSF52540 2 261 4.17E-30 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09410 9acc482a6ed8916bdd45932d26371027 344 PRINTS PR00091 Nitrogenase component II signature 3 16 2.0E-5 T 28-03-2018 CI104_RS09410 9acc482a6ed8916bdd45932d26371027 344 PRINTS PR00091 Nitrogenase component II signature 26 41 2.0E-5 T 28-03-2018 CI104_RS27850 da2e87815123c947780a79f6e2f92fe3 242 Pfam PF06952 PsiA protein 1 237 5.6E-85 T 28-03-2018 IPR009713 Uncharacterised protein family PsiA CI104_RS06540 47511b1432a467a6f8ff7d4c87a0aa42 117 PIRSF PIRSF007028 1 117 7.4E-56 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 CI104_RS06540 47511b1432a467a6f8ff7d4c87a0aa42 117 Pfam PF07237 Protein of unknown function (DUF1428) 2 103 9.0E-48 T 28-03-2018 IPR009874 Protein of unknown function DUF1428 CI104_RS06540 47511b1432a467a6f8ff7d4c87a0aa42 117 SUPERFAMILY SSF54909 1 116 7.33E-54 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS06540 47511b1432a467a6f8ff7d4c87a0aa42 117 Gene3D G3DSA:3.30.70.100 1 117 4.0E-62 T 28-03-2018 CI104_RS21755 d27e65deb230284e8d68a6d6fd8bee3c 273 Pfam PF06067 Domain of unknown function (DUF932) 36 261 4.9E-53 T 28-03-2018 IPR026325 Protein of unknown function DUF932 CI104_RS01835 9adb4c828e61bfee900da51319907eb9 275 Pfam PF01261 Xylose isomerase-like TIM barrel 19 225 4.7E-36 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS01835 9adb4c828e61bfee900da51319907eb9 275 Gene3D G3DSA:3.20.20.150 1 274 7.9E-51 T 28-03-2018 CI104_RS01835 9adb4c828e61bfee900da51319907eb9 275 SUPERFAMILY SSF51658 1 251 1.02E-52 T 28-03-2018 IPR013022 Xylose isomerase-like, TIM barrel domain CI104_RS16535 9b7008aa0c5db71b950e4a6a8f31c11d 405 Gene3D G3DSA:3.40.50.2000 87 398 1.2E-14 T 28-03-2018 CI104_RS16535 9b7008aa0c5db71b950e4a6a8f31c11d 405 TIGRFAM TIGR04015 WcaC: colanic acid biosynthesis glycosyltransferase WcaC 1 405 3.3E-268 T 28-03-2018 IPR023916 Colanic acid biosynthesis, glycosyl transferase, WcaC CI104_RS16535 9b7008aa0c5db71b950e4a6a8f31c11d 405 SUPERFAMILY SSF53756 11 405 2.09E-23 T 28-03-2018 CI104_RS16535 9b7008aa0c5db71b950e4a6a8f31c11d 405 Pfam PF13439 Glycosyltransferase Family 4 13 224 7.3E-9 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CI104_RS03800 35250768560a303f49448b0eeca59492 58 Pfam PF13260 Protein of unknown function (DUF4051) 1 53 1.2E-38 T 28-03-2018 IPR025125 Protein of unknown function DUF4051 CI104_RS25135 5f97b96942bb3c4d336f2bee0efff357 147 SUPERFAMILY SSF52218 1 146 1.58E-37 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS25135 5f97b96942bb3c4d336f2bee0efff357 147 Gene3D G3DSA:3.40.50.360 1 147 7.5E-28 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS25135 5f97b96942bb3c4d336f2bee0efff357 147 Pfam PF00258 Flavodoxin 7 138 1.8E-22 T 28-03-2018 IPR008254 Flavodoxin/nitric oxide synthase GO:0010181 CI104_RS23220 d150e5c7bc4509382b9b3cdad3180122 104 Pfam PF04341 Protein of unknown function, DUF485 11 98 2.2E-33 T 28-03-2018 IPR007436 Protein of unknown function DUF485 CI104_RS15045 7c9c8c16fba1ebb9f9a3c00da908ffff 212 PIRSF PIRSF006324 4 212 2.9E-60 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS15045 7c9c8c16fba1ebb9f9a3c00da908ffff 212 Pfam PF01810 LysE type translocator 18 209 3.3E-52 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 4.6E-72 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 4.6E-72 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 150 172 4.6E-72 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 278 297 4.6E-72 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 95 117 4.6E-72 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00183 E.coli/Salmonella-type porin signature 249 266 4.6E-72 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 243 255 5.3E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 5.3E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 325 342 5.3E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 152 163 5.3E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 95 105 5.3E-18 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 Pfam PF00267 Gram-negative porin 27 374 7.3E-148 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 Gene3D G3DSA:2.40.160.10 32 374 2.6E-56 T 28-03-2018 CI104_RS13730 f400ce42534cb06d7948d33cdd1a113d 374 SUPERFAMILY SSF56935 22 374 3.14E-83 T 28-03-2018 CI104_RS03050 4906bbc3d0dbe3494ae402ab45956db9 292 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 36 291 1.5E-92 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS15470 739c7e1d836bc1536b6721a97a510458 364 Pfam PF00419 Fimbrial protein 212 363 2.5E-15 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15470 739c7e1d836bc1536b6721a97a510458 364 Gene3D G3DSA:2.60.40.1090 209 363 3.3E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS15470 739c7e1d836bc1536b6721a97a510458 364 SUPERFAMILY SSF49401 211 361 5.84E-12 T 28-03-2018 IPR008966 Adhesion domain CI104_RS11870 3aedf1cba64ec9ba3c32cb9ff539eace 84 Pfam PF10729 Cell division activator CedA 6 82 3.9E-47 T 28-03-2018 IPR019666 Cell division activator CedA GO:0003677|GO:0051301 CI104_RS25605 62f366121f9a9ffc4fb3f93bf6ae0148 82 Pfam PF15738 Bacterial toxin of type II toxin-antitoxin system, YafQ 15 82 9.2E-26 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CI104_RS25605 62f366121f9a9ffc4fb3f93bf6ae0148 82 TIGRFAM TIGR02385 RelE_StbE: addiction module toxin, RelE/StbE family 9 81 2.2E-18 T 28-03-2018 IPR007712 Toxin-antitoxin system, RelE/ParE toxin family CI104_RS25605 62f366121f9a9ffc4fb3f93bf6ae0148 82 SUPERFAMILY SSF143011 17 81 1.02E-18 T 28-03-2018 IPR035095 Toxin RelE-like domain CI104_RS25605 62f366121f9a9ffc4fb3f93bf6ae0148 82 Gene3D G3DSA:3.30.2310.20 5 82 4.3E-16 T 28-03-2018 CI104_RS25605 62f366121f9a9ffc4fb3f93bf6ae0148 82 PIRSF PIRSF006156 10 82 2.1E-22 T 28-03-2018 IPR004386 Toxin-antitoxin system, YafQ-like toxin CI104_RS23010 f6f7153f4f6a8bf86ca569a07943b325 445 PIRSF PIRSF006060 1 433 8.7E-65 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS23010 f6f7153f4f6a8bf86ca569a07943b325 445 Pfam PF13520 Amino acid permease 12 403 5.3E-51 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS02745 c662433e10c6e84180510fa239008897 211 Gene3D G3DSA:3.10.450.50 72 172 7.5E-22 T 28-03-2018 CI104_RS02745 c662433e10c6e84180510fa239008897 211 Gene3D G3DSA:3.10.450.50 26 71 6.0E-5 T 28-03-2018 CI104_RS02745 c662433e10c6e84180510fa239008897 211 PIRSF PIRSF004649 1 211 8.0E-63 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CI104_RS02745 c662433e10c6e84180510fa239008897 211 Pfam PF05494 MlaC protein 33 198 1.0E-53 T 28-03-2018 IPR008869 Toluene tolerance Ttg2/phospholipid-binding protein MlaC CI104_RS10990 16a6d97a30776e06482ffca476d97c41 213 ProDom PD037115 UPF0274 YCFC HI0638 METABOLISM UNCHARACTERIZED VV1342 PURINE INVOLVED SO2634 HFLD 9 205 1.0E-94 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CI104_RS10990 16a6d97a30776e06482ffca476d97c41 213 Gene3D G3DSA:1.10.3890.10 4 207 2.5E-79 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CI104_RS10990 16a6d97a30776e06482ffca476d97c41 213 Pfam PF04356 Protein of unknown function (DUF489) 7 199 2.0E-74 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CI104_RS10990 16a6d97a30776e06482ffca476d97c41 213 SUPERFAMILY SSF101322 2 210 1.83E-81 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CI104_RS10990 16a6d97a30776e06482ffca476d97c41 213 Hamap MF_00695 High frequency lysogenization protein HflD [hflD]. 1 207 36.48 T 28-03-2018 IPR007451 Uncharacterised protein family UPF0274 CI104_RS19985 cece5ac36d087c2249e490d1ca0960bf 93 Gene3D G3DSA:1.20.120.570 11 91 3.7E-5 T 28-03-2018 CI104_RS19985 cece5ac36d087c2249e490d1ca0960bf 93 Pfam PF17274 Family of unknown function (DUF5339) 22 91 6.0E-24 T 28-03-2018 IPR020493 Uncharacterised protein family HI0310 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 SUPERFAMILY SSF53850 89 296 1.09E-33 T 28-03-2018 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 3 62 4.4E-21 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 Pfam PF03466 LysR substrate binding domain 89 296 7.2E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 39 50 3.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 29 39 3.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 PRINTS PR00039 LysR bacterial regulatory protein HTH signature 18 29 3.9E-6 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 SUPERFAMILY SSF46785 2 111 3.3E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 Gene3D G3DSA:3.40.190.10 175 266 3.6E-12 T 28-03-2018 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 Gene3D G3DSA:3.40.190.10 87 174 3.7E-19 T 28-03-2018 CI104_RS24985 4a60dc266bf3350677a8453a7630b089 302 Gene3D G3DSA:1.10.10.10 1 83 1.5E-22 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS12075 51a078ca7508abef78105b81d5864956 405 ProSitePatterns PS00216 Sugar transport proteins signature 1. 62 78 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS12075 51a078ca7508abef78105b81d5864956 405 Pfam PF07690 Major Facilitator Superfamily 13 354 5.4E-31 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS12075 51a078ca7508abef78105b81d5864956 405 SUPERFAMILY SSF103473 7 391 3.53E-43 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12075 51a078ca7508abef78105b81d5864956 405 Gene3D G3DSA:1.20.1250.20 212 398 9.7E-16 T 28-03-2018 CI104_RS12075 51a078ca7508abef78105b81d5864956 405 Gene3D G3DSA:1.20.1250.20 1 200 1.7E-24 T 28-03-2018 CI104_RS01030 ad5527a46ac7e950ead347d029fd3d7f 63 Pfam PF11120 Cellulose biosynthesis protein BcsF 2 59 3.0E-29 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CI104_RS01030 ad5527a46ac7e950ead347d029fd3d7f 63 ProDom PD053231 YHJT MEMBRANE INNER BCSF 2 63 4.0E-24 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CI104_RS01030 ad5527a46ac7e950ead347d029fd3d7f 63 TIGRFAM TIGR03493 cellullose_BcsF: celllulose biosynthesis operon protein BcsF/YhjT 2 63 5.7E-33 T 28-03-2018 IPR019995 Cellulose biosynthesis, BcsF/YhjT CI104_RS16205 d7c8bbb3c5d63e198abed869b32399f5 173 PIRSF PIRSF018505 1 173 1.6E-77 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CI104_RS16205 d7c8bbb3c5d63e198abed869b32399f5 173 Pfam PF02287 Dehydratase small subunit 39 170 2.3E-61 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CI104_RS16205 d7c8bbb3c5d63e198abed869b32399f5 173 SUPERFAMILY SSF47148 37 173 1.83E-63 T 28-03-2018 IPR003207 Propanediol/glycerol dehydratase, small subunit KEGG: 00640+4.2.1.28|MetaCyc: PWY-7013 CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 178 194 8.9E-10 T 28-03-2018 CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 283 295 8.9E-10 T 28-03-2018 CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 PRINTS PR00507 N12 class N6 adenine-specific DNA methyltransferase signature 211 225 8.9E-10 T 28-03-2018 CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 SUPERFAMILY SSF53335 485 569 4.42E-114 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 SUPERFAMILY SSF53335 8 46 4.42E-114 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 SUPERFAMILY SSF53335 80 454 4.42E-114 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 Pfam PF02384 N-6 DNA Methylase 155 455 5.3E-58 T 28-03-2018 IPR003356 DNA methylase, adenine-specific GO:0003677|GO:0006306|GO:0008170 CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 Pfam PF12161 HsdM N-terminal domain 11 143 6.4E-20 T 28-03-2018 IPR022749 N6 adenine-specific DNA methyltransferase, N-terminal domain CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 ProSitePatterns PS00092 N-6 Adenine-specific DNA methylases signature. 286 292 - T 28-03-2018 IPR002052 DNA methylase, N-6 adenine-specific, conserved site GO:0003676|GO:0008168|GO:0032259 CI104_RS21400 0a670ca33b7c2a3f736a94d8bfa71575 780 Gene3D G3DSA:3.40.50.150 176 644 3.7E-44 T 28-03-2018 CI104_RS21210 8d56ca18e2bea2fadd4d71fb03c50f0d 205 SMART SM00749 64 127 4.7E-12 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CI104_RS21210 8d56ca18e2bea2fadd4d71fb03c50f0d 205 SMART SM00749 143 205 4.8E-10 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CI104_RS21210 8d56ca18e2bea2fadd4d71fb03c50f0d 205 Pfam PF04972 BON domain 59 126 1.7E-19 T 28-03-2018 IPR007055 BON domain CI104_RS21210 8d56ca18e2bea2fadd4d71fb03c50f0d 205 Pfam PF04972 BON domain 139 203 1.2E-19 T 28-03-2018 IPR007055 BON domain CI104_RS09455 f3bff905674a18797e5d14a0c2776453 93 Pfam PF05449 Putative 3TM holin, Phage_holin_3 10 88 4.4E-28 T 28-03-2018 IPR008473 Putative 3TM holin, Phage holin 3 CI104_RS04050 680b623049d63b5b6efb4e075e057471 113 PIRSF PIRSF004761 1 113 3.6E-38 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS04050 680b623049d63b5b6efb4e075e057471 113 Hamap MF_00213 Probable hydrogenase nickel incorporation protein HypA [hypA]. 1 113 24.72 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS04050 680b623049d63b5b6efb4e075e057471 113 ProSitePatterns PS01249 Hydrogenases expression/synthesis hypA family signature. 34 76 - T 28-03-2018 IPR020538 Hydrogenase nickel incorporation protein HypA/HybF, conserved site CI104_RS04050 680b623049d63b5b6efb4e075e057471 113 Pfam PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA 1 112 3.2E-33 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS04050 680b623049d63b5b6efb4e075e057471 113 TIGRFAM TIGR00100 hypA: hydrogenase nickel insertion protein HypA 1 113 1.1E-44 T 28-03-2018 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF GO:0006464|GO:0016151 CI104_RS26270 63bb67793785e065b7846b18d2e8b852 439 Pfam PF06666 Protein of unknown function (DUF1173) 20 414 4.0E-80 T 28-03-2018 IPR009553 Protein of unknown function DUF1173 CI104_RS26270 63bb67793785e065b7846b18d2e8b852 439 Gene3D G3DSA:3.40.91.30 329 405 1.4E-4 T 28-03-2018 CI104_RS28510 86fd681221e971c2e2655aaeb04e8828 25 Pfam PF08048 Tap RepA1 leader peptide 1 25 3.5E-15 T 28-03-2018 IPR012605 RepA1 leader peptide Tap CI104_RS28510 86fd681221e971c2e2655aaeb04e8828 25 TIGRFAM TIGR03475 tap_IncFII_lead: RepA leader peptide Tap 1 25 2.5E-17 T 28-03-2018 IPR012605 RepA1 leader peptide Tap CI104_RS19470 549728b0b89c280fdb6e77d97155a5f2 118 Gene3D G3DSA:1.10.287.700 29 118 1.7E-4 T 28-03-2018 CI104_RS15535 5293556b72e06b0400b55ace0b01121c 167 SMART SM00260 14 151 8.3E-47 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CI104_RS15535 5293556b72e06b0400b55ace0b01121c 167 Gene3D G3DSA:2.30.30.40 100 145 2.9E-17 T 28-03-2018 CI104_RS15535 5293556b72e06b0400b55ace0b01121c 167 Pfam PF01584 CheW-like domain 18 154 2.6E-36 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CI104_RS15535 5293556b72e06b0400b55ace0b01121c 167 SUPERFAMILY SSF50341 16 156 6.41E-39 T 28-03-2018 IPR002545 CheW-like domain GO:0004871|GO:0006935|GO:0007165 CI104_RS15535 5293556b72e06b0400b55ace0b01121c 167 Gene3D G3DSA:2.40.50.180 35 99 7.3E-19 T 28-03-2018 CI104_RS15260 c0c6ecfab679835d0f7eb6bed34adb81 290 Pfam PF05425 Copper resistance protein D 186 283 1.8E-22 T 28-03-2018 IPR008457 Copper resistance protein D GO:0016021 CI104_RS22845 002e6c12916a0a0b788b3f43ed39233e 459 SUPERFAMILY SSF56954 2 447 4.97E-85 T 28-03-2018 CI104_RS22845 002e6c12916a0a0b788b3f43ed39233e 459 TIGRFAM TIGR01845 outer_NodT: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family 10 447 7.4E-65 T 28-03-2018 IPR010131 RND efflux system, outer membrane lipoprotein, NodT GO:0005215|GO:0006810|GO:0008289|GO:0016020 CI104_RS22845 002e6c12916a0a0b788b3f43ed39233e 459 Pfam PF02321 Outer membrane efflux protein 55 239 1.1E-22 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS22845 002e6c12916a0a0b788b3f43ed39233e 459 Pfam PF02321 Outer membrane efflux protein 268 440 8.2E-23 T 28-03-2018 IPR003423 Outer membrane efflux protein GO:0005215|GO:0006810 CI104_RS22845 002e6c12916a0a0b788b3f43ed39233e 459 Gene3D G3DSA:1.20.1600.10 20 452 4.6E-70 T 28-03-2018 CI104_RS21350 29ae9628913139c4a645467fbff9a271 157 Pfam PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component 19 148 2.6E-28 T 28-03-2018 IPR007387 Tripartite ATP-independent periplasmic transporter, DctQ component CI104_RS12210 16a235400d3c3c7e8bb735b3ee64aa24 340 Gene3D G3DSA:1.20.1630.10 10 293 7.8E-40 T 28-03-2018 CI104_RS12210 16a235400d3c3c7e8bb735b3ee64aa24 340 Pfam PF03916 Polysulphide reductase, NrfD 12 289 1.4E-36 T 28-03-2018 IPR005614 NrfD family CI104_RS22715 f5a6575dd0e788716a2b73550d60e051 115 SUPERFAMILY SSF54913 12 114 7.04E-35 T 28-03-2018 IPR011322 Nitrogen regulatory PII-like, alpha/beta CI104_RS22715 f5a6575dd0e788716a2b73550d60e051 115 Gene3D G3DSA:3.30.70.120 8 115 1.4E-36 T 28-03-2018 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CI104_RS22715 f5a6575dd0e788716a2b73550d60e051 115 Pfam PF03091 CutA1 divalent ion tolerance protein 15 112 3.9E-33 T 28-03-2018 IPR004323 Divalent ion tolerance protein, CutA GO:0010038 CI104_RS22715 f5a6575dd0e788716a2b73550d60e051 115 Hamap MF_01160 Divalent-cation tolerance protein CutA [cutA]. 9 115 36.543 T 28-03-2018 IPR023700 Divalent cation tolerance protein CutA, Enterobacteria GO:0005507|GO:0005737 CI104_RS07325 8a9c6855778d5a19c0c51b0328fd611e 315 SUPERFAMILY SSF53807 28 305 2.04E-47 T 28-03-2018 CI104_RS07325 8a9c6855778d5a19c0c51b0328fd611e 315 Pfam PF01497 Periplasmic binding protein 46 293 2.4E-28 T 28-03-2018 IPR002491 ABC transporter periplasmic binding domain GO:0005488 CI104_RS07325 8a9c6855778d5a19c0c51b0328fd611e 315 Gene3D G3DSA:3.40.50.1980 18 151 5.5E-22 T 28-03-2018 CI104_RS07325 8a9c6855778d5a19c0c51b0328fd611e 315 Gene3D G3DSA:3.40.50.1980 152 315 1.2E-33 T 28-03-2018 CI104_RS01635 e0a9554319875dd8bc9eaf58bf4c4602 446 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 6 360 7.5E-134 T 28-03-2018 IPR010839 Acyclic terpene utilisation CI104_RS09615 244a70fa9e89c05f7c7e268ce2d90fe0 161 Gene3D G3DSA:4.10.1070.10 45 153 1.3E-21 T 28-03-2018 CI104_RS09615 244a70fa9e89c05f7c7e268ce2d90fe0 161 SUPERFAMILY SSF88874 4 160 1.83E-24 T 28-03-2018 CI104_RS17025 1f76a68049de93e7cbc94310c813b131 364 SUPERFAMILY SSF161098 131 346 3.53E-15 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17025 1f76a68049de93e7cbc94310c813b131 364 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 152 359 2.5E-40 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17025 1f76a68049de93e7cbc94310c813b131 364 Gene3D G3DSA:1.10.3720.10 2 349 1.0E-35 T 28-03-2018 CI104_RS03655 3a2e217328126079a4a97f83a803e2ba 349 SUPERFAMILY SSF51004 39 331 1.7E-35 T 28-03-2018 IPR011048 Cytochrome cd1-nitrite reductase-like, haem d1 domain CI104_RS03655 3a2e217328126079a4a97f83a803e2ba 349 Gene3D G3DSA:2.130.10.10 33 337 4.3E-38 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 ProSitePatterns PS00653 Glycosyl hydrolases family 1 N-terminal signature. 10 24 - T 28-03-2018 IPR033132 Glycosyl hydrolases family 1, N-terminal conserved site CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 SUPERFAMILY SSF51445 2 470 3.19E-166 T 28-03-2018 IPR017853 Glycoside hydrolase superfamily CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 Pfam PF00232 Glycosyl hydrolase family 1 5 474 2.0E-132 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 371 379 2.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 439 451 2.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 392 403 2.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 414 431 2.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 PRINTS PR00131 Glycosyl hydrolase family 1 signature 306 320 2.0E-16 T 28-03-2018 IPR001360 Glycoside hydrolase family 1 GO:0004553|GO:0005975 CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 ProSitePatterns PS00572 Glycosyl hydrolases family 1 active site. 371 379 - T 28-03-2018 IPR018120 Glycoside hydrolase family 1, active site CI104_RS21055 20b2a6f52434f6a3a242f2123e6249ee 477 Gene3D G3DSA:3.20.20.80 3 477 1.1E-154 T 28-03-2018 CI104_RS16100 8870b858601fea62273a3e4d88a17fb1 225 Pfam PF02361 Cobalt transport protein 10 221 1.3E-49 T 28-03-2018 IPR003339 ABC/ECF transporter, transmembrane component CI104_RS16100 8870b858601fea62273a3e4d88a17fb1 225 TIGRFAM TIGR02454 ECF_T_CbiQ: cobalt ECF transporter T component CbiQ 16 215 2.4E-53 T 28-03-2018 IPR012809 Cobalt ECF transporter T component CbiQ GO:0005887|GO:0006824|GO:0043190 CI104_RS10785 161e97cacdfad1419dff99d1c2d38c68 154 SUPERFAMILY SSF143749 1 136 1.41E-57 T 28-03-2018 IPR009312 Minor tail protein U-like CI104_RS10785 161e97cacdfad1419dff99d1c2d38c68 154 Pfam PF09646 Gp37 protein 10 152 6.1E-64 T 28-03-2018 IPR018602 Gp37/putative cytoplasmic protein STM4215 CI104_RS10785 161e97cacdfad1419dff99d1c2d38c68 154 Gene3D G3DSA:3.30.2000.10 1 135 3.4E-41 T 28-03-2018 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 Pfam PF00691 OmpA family 115 210 2.3E-22 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 Gene3D G3DSA:3.30.1330.60 83 220 3.7E-41 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01021 OMPA domain signature 116 138 5.6E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01021 OMPA domain signature 161 177 5.6E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01021 OMPA domain signature 146 161 5.6E-13 T 28-03-2018 IPR006664 Outer membrane protein, bacterial GO:0009279|GO:0016021 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 SUPERFAMILY SSF103088 103 218 2.62E-37 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 179 198 1.7E-7 T 28-03-2018 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 161 178 1.7E-7 T 28-03-2018 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 199 219 1.7E-7 T 28-03-2018 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 PRINTS PR01023 Sodium-type flagellar protein MotY precursor signature 132 158 1.7E-7 T 28-03-2018 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 ProSitePatterns PS01068 OmpA-like domain. 148 192 - T 28-03-2018 IPR006690 Outer membrane protein, OmpA-like, conserved site GO:0009279|GO:0016021 CI104_RS00920 0aabc5901cedd0fb650512b9c40c7f46 220 Pfam PF13488 Glycine zipper 37 85 2.4E-12 T 28-03-2018 CI104_RS19520 aec12e11d916468060940fc9b4b1916e 56 ProSitePatterns PS01309 Uncharacterized protein family UPF0057 signature. 7 22 - T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CI104_RS19520 aec12e11d916468060940fc9b4b1916e 56 Pfam PF01679 Proteolipid membrane potential modulator 3 48 2.3E-17 T 28-03-2018 IPR000612 Proteolipid membrane potential modulator GO:0016021 CI104_RS16335 e6940829d1ba6a13d17e6227cba93d24 274 Gene3D G3DSA:3.40.50.720 2 269 1.2E-21 T 28-03-2018 CI104_RS16335 e6940829d1ba6a13d17e6227cba93d24 274 SUPERFAMILY SSF51735 2 266 9.05E-29 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS16335 e6940829d1ba6a13d17e6227cba93d24 274 Pfam PF01370 NAD dependent epimerase/dehydratase family 8 213 4.9E-9 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS21305 2be31f363c723e5b91c89639cd4fa1db 258 Pfam PF06738 Putative threonine/serine exporter 13 252 8.9E-70 T 28-03-2018 IPR010619 Putative threonine/serine exporter CI104_RS19485 93349ae9aeeeabe51cde38274ce94770 325 SUPERFAMILY SSF51197 20 322 1.1E-90 T 28-03-2018 CI104_RS19485 93349ae9aeeeabe51cde38274ce94770 325 Hamap MF_01083 Protein CsiD [csiD]. 1 325 73.828 T 28-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 CI104_RS19485 93349ae9aeeeabe51cde38274ce94770 325 Gene3D G3DSA:3.60.130.10 15 325 1.3E-61 T 28-03-2018 CI104_RS19485 93349ae9aeeeabe51cde38274ce94770 325 ProDom PD135861 METAL-BINDING IRON CSID GAB CYTOPLASMIC 3D-STRUCTURE HOMOLOG DIRECT SEQUENCING 19 314 7.0E-146 T 28-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 CI104_RS19485 93349ae9aeeeabe51cde38274ce94770 325 Pfam PF08943 CsiD 21 314 2.2E-149 T 28-03-2018 IPR015038 Uncharacterised protein family CsiD GO:0005506 CI104_RS11735 1d4a4c3e54af1075af632b58a2af790a 138 Gene3D G3DSA:3.90.79.10 2 136 3.7E-29 T 28-03-2018 CI104_RS11735 1d4a4c3e54af1075af632b58a2af790a 138 Pfam PF00293 NUDIX domain 4 124 1.3E-18 T 28-03-2018 IPR000086 NUDIX hydrolase domain GO:0016787 CI104_RS11735 1d4a4c3e54af1075af632b58a2af790a 138 ProSitePatterns PS00893 Nudix box signature. 38 59 - T 28-03-2018 IPR020084 NUDIX hydrolase, conserved site GO:0016787 CI104_RS11735 1d4a4c3e54af1075af632b58a2af790a 138 SUPERFAMILY SSF55811 2 126 1.49E-34 T 28-03-2018 IPR015797 NUDIX hydrolase domain-like GO:0016787 CI104_RS11735 1d4a4c3e54af1075af632b58a2af790a 138 PRINTS PR00502 NUDIX hydrolase family signature 33 47 5.6E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS11735 1d4a4c3e54af1075af632b58a2af790a 138 PRINTS PR00502 NUDIX hydrolase family signature 47 62 5.6E-7 T 28-03-2018 IPR020476 NUDIX hydrolase Reactome: R-HSA-2393930 CI104_RS18100 1ad2609d84451d9f0531de731d8f1d77 72 ProDom PD056452 UNCHARACTERIZED BACTERIA SIMILAR YPEB CYTOPLASMIC VCA0163 PRODUCT STM2426 GENE YPO2988 14 68 1.0E-24 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CI104_RS18100 1ad2609d84451d9f0531de731d8f1d77 72 Pfam PF12843 Putative quorum-sensing-regulated virulence factor 3 68 4.7E-29 T 28-03-2018 IPR024530 Putative quorum-sensing-regulated virulence factor CI104_RS10890 a05cd5dae9f6d642c71c46d3b815dc2e 211 Pfam PF00440 Bacterial regulatory proteins, tetR family 25 70 5.1E-15 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS10890 a05cd5dae9f6d642c71c46d3b815dc2e 211 SUPERFAMILY SSF46689 11 82 1.8E-17 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS10890 a05cd5dae9f6d642c71c46d3b815dc2e 211 SUPERFAMILY SSF48498 92 206 1.72E-28 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS10890 a05cd5dae9f6d642c71c46d3b815dc2e 211 Gene3D G3DSA:1.10.10.60 9 70 1.4E-19 T 28-03-2018 CI104_RS10890 a05cd5dae9f6d642c71c46d3b815dc2e 211 Gene3D G3DSA:1.10.357.10 71 204 7.3E-23 T 28-03-2018 CI104_RS26010 5a9b9288265784c05485bcfaacad2ffa 220 Pfam PF14348 Domain of unknown function (DUF4400) 33 217 1.1E-13 T 28-03-2018 IPR022266 Integrating conjugative element protein, PFL4697-type CI104_RS07540 dfbabe18fbd5ce7ade2e1f5861475928 105 Gene3D G3DSA:3.30.460.10 1 105 6.6E-34 T 28-03-2018 CI104_RS07540 dfbabe18fbd5ce7ade2e1f5861475928 105 SUPERFAMILY SSF81301 4 105 3.27E-36 T 28-03-2018 CI104_RS07540 dfbabe18fbd5ce7ade2e1f5861475928 105 Hamap MF_01477 Ribosomal silencing factor RsfS [rsfS]. 3 105 24.212 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CI104_RS07540 dfbabe18fbd5ce7ade2e1f5861475928 105 Pfam PF02410 Ribosomal silencing factor during starvation 10 104 2.1E-27 T 28-03-2018 CI104_RS07540 dfbabe18fbd5ce7ade2e1f5861475928 105 TIGRFAM TIGR00090 rsfS_iojap_ybeB: ribosome silencing factor 8 104 2.6E-37 T 28-03-2018 IPR004394 Protein Iojap/ribosomal silencing factor RsfS CI104_RS08780 871aa7f9c4500435b6177ffda22a8bc4 337 Gene3D G3DSA:3.90.25.10 181 337 3.6E-25 T 28-03-2018 CI104_RS08780 871aa7f9c4500435b6177ffda22a8bc4 337 Gene3D G3DSA:3.40.50.720 1 180 2.0E-27 T 28-03-2018 CI104_RS08780 871aa7f9c4500435b6177ffda22a8bc4 337 Pfam PF01370 NAD dependent epimerase/dehydratase family 3 234 7.1E-27 T 28-03-2018 IPR001509 NAD-dependent epimerase/dehydratase GO:0003824|GO:0050662 CI104_RS08780 871aa7f9c4500435b6177ffda22a8bc4 337 SUPERFAMILY SSF51735 298 335 1.7E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS08780 871aa7f9c4500435b6177ffda22a8bc4 337 SUPERFAMILY SSF51735 1 270 1.7E-60 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS27350 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF01548 Transposase 7 147 9.3E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS27350 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 9.6E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CI104_RS26790 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF01548 Transposase 7 147 9.3E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS26790 0737c7343f2002efc5736285cb8e73b8 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 286 9.6E-20 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CI104_RS03890 f31b255706640f5a5ef047f66836202e 193 SUPERFAMILY SSF52218 1 192 5.95E-41 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS03890 f31b255706640f5a5ef047f66836202e 193 Gene3D G3DSA:3.40.50.360 1 193 5.6E-35 T 28-03-2018 IPR029039 Flavoprotein-like domain CI104_RS03890 f31b255706640f5a5ef047f66836202e 193 Pfam PF02525 Flavodoxin-like fold 3 188 1.1E-35 T 28-03-2018 IPR003680 Flavodoxin-like fold CI104_RS22065 0ba74a6bc3aabcbd6fbf032e676672b6 491 TIGRFAM TIGR00905 2A0302: transporter, basic amino acid/polyamine antiporter (APA) family 20 490 6.8E-167 T 28-03-2018 IPR004754 Amino acid antiporter GO:0006865|GO:0016021 CI104_RS22065 0ba74a6bc3aabcbd6fbf032e676672b6 491 PIRSF PIRSF006060 5 452 2.5E-41 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS22065 0ba74a6bc3aabcbd6fbf032e676672b6 491 PIRSF PIRSF006060 413 490 5.4 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS22065 0ba74a6bc3aabcbd6fbf032e676672b6 491 Pfam PF13520 Amino acid permease 23 452 5.7E-71 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS22065 0ba74a6bc3aabcbd6fbf032e676672b6 491 TIGRFAM TIGR03810 arg_ornith_anti: arginine-ornithine antiporter 21 489 1.3E-183 T 28-03-2018 IPR022461 Arginine/ornithine antiporter GO:0005887|GO:0006527|GO:0043858 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 322 339 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 Gene3D G3DSA:1.20.1250.20 246 474 2.4E-32 T 28-03-2018 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 Gene3D G3DSA:1.20.1250.20 2 224 8.1E-38 T 28-03-2018 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 ProSitePatterns PS00216 Sugar transport proteins signature 1. 71 88 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 Pfam PF00083 Sugar (and other) transporter 16 460 2.3E-110 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 SUPERFAMILY SSF103473 8 460 3.53E-73 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 ProSitePatterns PS00217 Sugar transport proteins signature 2. 113 138 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 TIGRFAM TIGR00879 SP: MFS transporter, sugar porter (SP) family 5 457 2.1E-107 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 PRINTS PR00171 Sugar transporter signature 278 288 1.0E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 PRINTS PR00171 Sugar transporter signature 24 34 1.0E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 PRINTS PR00171 Sugar transporter signature 108 127 1.0E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 PRINTS PR00171 Sugar transporter signature 363 384 1.0E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS18695 d78af52b1a41ebd70a5e97087ddde70b 479 PRINTS PR00171 Sugar transporter signature 386 398 1.0E-20 T 28-03-2018 IPR003663 Sugar/inositol transporter GO:0016020|GO:0022891|GO:0055085 CI104_RS05435 8bfba673c95524af71d689ec6c0bf3a3 134 Pfam PF16358 RcsF lipoprotein 28 132 2.6E-50 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CI104_RS05435 8bfba673c95524af71d689ec6c0bf3a3 134 Hamap MF_00976 Outer membrane lipoprotein RcsF [rcsF]. 1 133 35.999 T 28-03-2018 IPR030852 Outer membrane lipoprotein RcsF GO:0009279|GO:0035556 CI104_RS15770 f1b4b6c89ff5eb391c463af6a2449468 250 Gene3D G3DSA:3.40.50.300 1 248 2.4E-77 T 28-03-2018 CI104_RS15770 f1b4b6c89ff5eb391c463af6a2449468 250 ProSitePatterns PS00211 ABC transporters family signature. 145 159 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS15770 f1b4b6c89ff5eb391c463af6a2449468 250 SUPERFAMILY SSF52540 4 243 6.75E-78 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15770 f1b4b6c89ff5eb391c463af6a2449468 250 PIRSF PIRSF039085 1 249 2.9E-111 T 28-03-2018 IPR030679 ABC-type amino acid transport system, ATPase component, HisP-type GO:0003333|GO:0015424 CI104_RS15770 f1b4b6c89ff5eb391c463af6a2449468 250 Pfam PF00005 ABC transporter 19 173 1.6E-35 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS15770 f1b4b6c89ff5eb391c463af6a2449468 250 SMART SM00382 28 221 1.2E-19 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS26705 1207c430e4d3a258777bcbad8fc63766 292 Gene3D G3DSA:3.40.50.300 1 279 4.6E-41 T 28-03-2018 CI104_RS26705 1207c430e4d3a258777bcbad8fc63766 292 SUPERFAMILY SSF52540 5 288 9.91E-52 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS26705 1207c430e4d3a258777bcbad8fc63766 292 Pfam PF00580 UvrD/REP helicase N-terminal domain 6 260 5.9E-37 T 28-03-2018 IPR034739 UvrD/AddA helicase, N-terminal GO:0005524 CI104_RS13430 d9ababe88fb82af653ef3726a4cd33e5 467 PIRSF PIRSF006446 2 456 1.1E-221 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CI104_RS13430 d9ababe88fb82af653ef3726a4cd33e5 467 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 9 437 9.7E-165 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CI104_RS01530 aae1fb673f39652b53c49247f9654688 446 Pfam PF02447 GntP family permease 5 441 1.0E-166 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS01530 aae1fb673f39652b53c49247f9654688 446 PIRSF PIRSF002746 1 446 1.0E-154 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS01530 aae1fb673f39652b53c49247f9654688 446 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 4 444 3.1E-176 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS00795 b56e6a65908b24142dcd4b5673372184 417 SUPERFAMILY SSF53383 16 411 7.84E-59 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS00795 b56e6a65908b24142dcd4b5673372184 417 Gene3D G3DSA:3.90.1150.10 290 407 1.7E-16 T 28-03-2018 IPR015422 Pyridoxal phosphate-dependent transferase, subdomain 2 GO:0003824 CI104_RS00795 b56e6a65908b24142dcd4b5673372184 417 Gene3D G3DSA:3.40.640.10 69 289 2.5E-34 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS00795 b56e6a65908b24142dcd4b5673372184 417 Pfam PF00155 Aminotransferase class I and II 156 400 2.3E-20 T 28-03-2018 IPR004839 Aminotransferase, class I/classII GO:0009058|GO:0030170 CI104_RS27235 b0cf7a79b3a24d22029e9a653632083c 175 Gene3D G3DSA:1.20.120.10 37 135 3.0E-4 T 28-03-2018 CI104_RS27235 b0cf7a79b3a24d22029e9a653632083c 175 SUPERFAMILY SSF47175 44 131 3.97E-9 T 28-03-2018 IPR010980 Cytochrome c/b562 GO:0005506|GO:0009055|GO:0020037|GO:0022900 CI104_RS22970 9d588c78d4ad8c21916bd67296fbdcc9 209 PIRSF PIRSF020606 1 204 2.1E-79 T 28-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 CI104_RS22970 9d588c78d4ad8c21916bd67296fbdcc9 209 Pfam PF09997 Predicted membrane protein (DUF2238) 42 182 2.2E-56 T 28-03-2018 IPR014509 Uncharacterised conserved protein UCP020606 CI104_RS18205 621d39de7c94437795ba600ca7e71130 149 Pfam PF11143 Protein of unknown function (DUF2919) 6 145 1.2E-47 T 28-03-2018 IPR021318 Protein of unknown function DUF2919 CI104_RS24495 08bcac3c3f704ada091cf889a2dca306 291 Pfam PF01925 Sulfite exporter TauE/SafE 23 249 2.0E-31 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CI104_RS23450 0c8f7c8e032388ce8bf07f3fd2ad4034 245 Pfam PF06251 Capsule biosynthesis GfcC 19 244 3.8E-86 T 28-03-2018 IPR010425 Domain of unknown function DUF1017 CI104_RS00785 8622d66799ed2253a9317a543b7d49ec 134 SUPERFAMILY SSF46894 43 115 1.56E-9 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS00785 8622d66799ed2253a9317a543b7d49ec 134 Pfam PF00486 Transcriptional regulatory protein, C terminal 52 115 6.0E-7 T 28-03-2018 IPR001867 OmpR/PhoB-type DNA-binding domain GO:0000160|GO:0003677|GO:0006355 CI104_RS00785 8622d66799ed2253a9317a543b7d49ec 134 Gene3D G3DSA:1.10.10.10 38 122 8.2E-11 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS26735 64f0b3cb5c5b91e846481954c83414a9 412 Gene3D G3DSA:1.20.1250.20 204 392 8.8E-14 T 28-03-2018 CI104_RS26735 64f0b3cb5c5b91e846481954c83414a9 412 Gene3D G3DSA:1.20.1250.20 1 203 7.3E-14 T 28-03-2018 CI104_RS26735 64f0b3cb5c5b91e846481954c83414a9 412 SUPERFAMILY SSF103473 1 392 3.4E-33 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS21835 a180ed6550fed82b60760e8095f1e784 85 Pfam PF09857 Putative toxin of bacterial toxin-antitoxin pair 1 85 1.1E-39 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CI104_RS21835 a180ed6550fed82b60760e8095f1e784 85 Hamap MF_00827 UPF0386 protein YjhX [yjhX]. 1 85 28.642 T 28-03-2018 IPR018654 Putative toxin of bacterial toxin-antitoxin pair CI104_RS19320 69c827b17a6e7de2b4e95f78cd3e5cc3 291 SUPERFAMILY SSF52540 22 218 2.27E-29 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19320 69c827b17a6e7de2b4e95f78cd3e5cc3 291 Gene3D G3DSA:3.40.50.300 51 226 4.0E-23 T 28-03-2018 CI104_RS19320 69c827b17a6e7de2b4e95f78cd3e5cc3 291 Pfam PF01926 50S ribosome-binding GTPase 39 133 1.1E-14 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS19320 69c827b17a6e7de2b4e95f78cd3e5cc3 291 Gene3D G3DSA:3.40.50.300 30 50 9.0E-4 T 28-03-2018 CI104_RS10825 8858401b2a352bc03a1975f5e6dc4eb9 294 Pfam PF06995 Phage P2 GpU 6 122 2.8E-32 T 28-03-2018 IPR009734 Myoviridae, GpU CI104_RS15295 0ba1377a02d2677500378ead81eb8910 117 ProDom PD077599 YEBF LIPOPROTEIN EXPORTED PERIPLASMIC PRECURSOR SIGNAL SIMILAR PALMITATE MEMBRANE ESCHERICHIA 24 117 7.0E-42 T 28-03-2018 IPR025603 YebF/Colicin-M immunity protein CI104_RS15295 0ba1377a02d2677500378ead81eb8910 117 Pfam PF13995 YebF-like protein 27 114 3.6E-40 T 28-03-2018 IPR025603 YebF/Colicin-M immunity protein CI104_RS25355 a92c4e497a933bbe68e39abcfd3e36c7 334 SMART SM00470 60 149 2.3E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS25355 a92c4e497a933bbe68e39abcfd3e36c7 334 Pfam PF02195 ParB-like nuclease domain 69 140 2.0E-4 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS25355 a92c4e497a933bbe68e39abcfd3e36c7 334 Gene3D G3DSA:3.90.1530.10 51 149 6.3E-7 T 28-03-2018 CI104_RS25355 a92c4e497a933bbe68e39abcfd3e36c7 334 SUPERFAMILY SSF110849 68 139 8.37E-7 T 28-03-2018 IPR003115 ParB/Sulfiredoxin CI104_RS25355 a92c4e497a933bbe68e39abcfd3e36c7 334 Pfam PF08775 ParB family 207 330 3.9E-14 T 28-03-2018 IPR014884 ParB protein family, C-terminal CI104_RS25355 a92c4e497a933bbe68e39abcfd3e36c7 334 Gene3D G3DSA:1.10.10.10 150 203 0.091 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS08800 a9266a295730f82cc2e2064dd53fec0c 144 Pfam PF07681 DoxX 21 98 8.5E-19 T 28-03-2018 IPR032808 DoxX family CI104_RS22890 5908f14fb7e9db34766698785b0f95a8 351 SUPERFAMILY SSF49401 211 351 4.77E-17 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22890 5908f14fb7e9db34766698785b0f95a8 351 Gene3D G3DSA:2.60.40.1090 213 351 9.5E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22890 5908f14fb7e9db34766698785b0f95a8 351 Pfam PF00419 Fimbrial protein 204 351 1.5E-21 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS01160 36c0916a1bdae8dbe23040bac8699953 280 Pfam PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ 33 278 6.7E-116 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CI104_RS01160 36c0916a1bdae8dbe23040bac8699953 280 Gene3D G3DSA:3.40.50.150 1 280 6.2E-92 T 28-03-2018 CI104_RS01160 36c0916a1bdae8dbe23040bac8699953 280 Hamap MF_00934 Ribosomal RNA large subunit methyltransferase J [rlmJ]. 2 266 41.915 T 28-03-2018 IPR007473 Ribosomal RNA large subunit methyltransferase J GO:0008649|GO:0070475 CI104_RS01160 36c0916a1bdae8dbe23040bac8699953 280 SUPERFAMILY SSF53335 9 279 2.08E-99 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS16715 835c2e94886047e9a2f548b796424c7b 156 Pfam PF07308 Protein of unknown function (DUF1456) 86 151 1.2E-20 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 CI104_RS16715 835c2e94886047e9a2f548b796424c7b 156 Pfam PF07308 Protein of unknown function (DUF1456) 4 70 2.5E-24 T 28-03-2018 IPR009921 Domain of unknown function DUF1456 CI104_RS18770 482d1628c66696621d0a24695101f613 211 SUPERFAMILY SSF56784 6 147 2.07E-8 T 28-03-2018 IPR023214 HAD-like domain CI104_RS18770 482d1628c66696621d0a24695101f613 211 TIGRFAM TIGR01545 YfhB_g-proteo: HAD hydrolase, family IF 3 211 2.4E-129 T 28-03-2018 IPR006435 HAD-superfamily hydrolase, subfamily IF, YfhB KEGG: 00564+3.1.3.27|MetaCyc: PWY-5269|MetaCyc: PWY-5668|MetaCyc: PWY-7817 CI104_RS18770 482d1628c66696621d0a24695101f613 211 Gene3D G3DSA:3.40.50.1000 1 145 2.9E-7 T 28-03-2018 IPR023214 HAD-like domain CI104_RS18770 482d1628c66696621d0a24695101f613 211 Pfam PF12710 haloacid dehalogenase-like hydrolase 9 192 3.1E-13 T 28-03-2018 CI104_RS03975 1466d19a427fda8fb5ec71b43a780af5 141 TIGRFAM TIGR02803 ExbD_1: TonB system transport protein ExbD 15 136 2.4E-69 T 28-03-2018 IPR014170 TonB system transport protein ExbD type-1 GO:0006810|GO:0016020 CI104_RS03975 1466d19a427fda8fb5ec71b43a780af5 141 Pfam PF02472 Biopolymer transport protein ExbD/TolR 13 133 1.6E-31 T 28-03-2018 IPR003400 Biopolymer transport protein ExbD/TolR GO:0005215|GO:0006810|GO:0016020 CI104_RS22655 0a9c40fb1c750b2bdf22b58b1d25ea17 44 Pfam PF08085 Entericidin EcnA/B family 23 43 3.2E-7 T 28-03-2018 IPR012556 Entericidin A/B GO:0009636|GO:0016020 CI104_RS22655 0a9c40fb1c750b2bdf22b58b1d25ea17 44 Gene3D G3DSA:3.40.190.10 1 32 1.5E-4 T 28-03-2018 CI104_RS07480 14d781196dff3571cde0160a88b93478 127 Pfam PF02537 CrcB-like protein, Camphor Resistance (CrcB) 6 116 3.3E-24 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CI104_RS07480 14d781196dff3571cde0160a88b93478 127 TIGRFAM TIGR00494 crcB: protein CrcB 6 121 5.0E-44 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CI104_RS07480 14d781196dff3571cde0160a88b93478 127 Hamap MF_00454 Putative fluoride ion transporter CrcB [crcB]. 5 122 18.793 T 28-03-2018 IPR003691 Putative fluoride ion transporter CrcB GO:0016021 CI104_RS04950 7e715058041b601ac48ecc4e2692e10a 64 Gene3D G3DSA:3.30.50.10 2 60 4.8E-28 T 28-03-2018 IPR013088 Zinc finger, NHR/GATA-type GO:0006355|GO:0008270 CI104_RS04950 7e715058041b601ac48ecc4e2692e10a 64 Pfam PF03884 DNA gyrase inhibitor YacG 7 57 6.1E-25 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CI104_RS04950 7e715058041b601ac48ecc4e2692e10a 64 Hamap MF_00649 DNA gyrase inhibitor YacG [yacG]. 3 59 19.456 T 28-03-2018 IPR005584 DNA gyrase inhibitor YacG GO:0008270 CI104_RS04950 7e715058041b601ac48ecc4e2692e10a 64 SUPERFAMILY SSF57716 2 62 1.21E-22 T 28-03-2018 CI104_RS09505 c43cde3c81ba3d1b485a5441239fc08e 545 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 36 528 8.5E-72 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CI104_RS09505 c43cde3c81ba3d1b485a5441239fc08e 545 Pfam PF05136 Phage portal protein, lambda family 38 418 2.0E-106 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 SUPERFAMILY SSF52540 1 343 2.52E-39 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 TIGRFAM TIGR00611 recf: DNA replication and repair protein RecF 1 355 1.4E-137 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 ProSitePatterns PS00617 RecF protein signature 1. 117 137 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 ProSitePatterns PS00618 RecF protein signature 2. 298 316 - T 28-03-2018 IPR018078 DNA-binding, RecF, conserved site GO:0003697|GO:0005524|GO:0006281 CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 Pfam PF02463 RecF/RecN/SMC N terminal domain 3 354 7.3E-40 T 28-03-2018 IPR003395 RecF/RecN/SMC, N-terminal CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 Hamap MF_00365 DNA replication and repair protein RecF [recF]. 1 357 96.739 T 28-03-2018 IPR001238 DNA-binding, RecF GO:0003697|GO:0005524|GO:0006281 CI104_RS00015 a6efc0bdf53f1124ed88a2ffba8c5f94 357 Gene3D G3DSA:3.40.50.300 1 357 2.2E-31 T 28-03-2018 CI104_RS05705 e9f6b95e73903688d6bde240e44b3a7f 256 Pfam PF00795 Carbon-nitrogen hydrolase 6 241 2.4E-30 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS05705 e9f6b95e73903688d6bde240e44b3a7f 256 ProSitePatterns PS01227 Uncharacterized protein family UPF0012 signature. 137 157 - T 28-03-2018 IPR001110 Uncharacterised protein family UPF0012, conserved site CI104_RS05705 e9f6b95e73903688d6bde240e44b3a7f 256 SUPERFAMILY SSF56317 4 249 5.62E-61 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS05705 e9f6b95e73903688d6bde240e44b3a7f 256 Gene3D G3DSA:3.60.110.10 2 254 2.6E-55 T 28-03-2018 IPR003010 Carbon-nitrogen hydrolase GO:0006807|GO:0016810 CI104_RS10685 593baad6170f340cc1455fb31f0caab3 302 Pfam PF11300 Protein of unknown function (DUF3102) 64 171 7.1E-7 T 28-03-2018 IPR021451 Protein of unknown function DUF3102 CI104_RS08690 7ab48859c6b4f74b43b8ea568ade68d2 95 Pfam PF07214 Protein of unknown function (DUF1418) 2 92 3.7E-35 T 28-03-2018 IPR010815 Protein of unknown function DUF1418 CI104_RS03425 f33b1e145db99f130a2ba2baf8c591ca 204 Pfam PF16452 Bacteriophage CI repressor C-terminal domain 100 197 2.2E-24 T 28-03-2018 IPR032499 Bacteriophage CI repressor, C-terminal GO:0051259 CI104_RS03425 f33b1e145db99f130a2ba2baf8c591ca 204 Pfam PF07022 Bacteriophage CI repressor helix-turn-helix domain 25 86 1.5E-24 T 28-03-2018 IPR010744 Bacteriophage CI repressor GO:0003677|GO:0045892 CI104_RS24175 236fca8b15db631c0973d869282db637 434 Pfam PF00939 Sodium:sulfate symporter transmembrane region 15 433 9.6E-20 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS09500 6cd443af15103d015156547960c95a9e 87 Gene3D G3DSA:3.30.1580.10 18 84 1.8E-21 T 28-03-2018 CI104_RS09500 6cd443af15103d015156547960c95a9e 87 SUPERFAMILY SSF64210 18 75 1.83E-10 T 28-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CI104_RS09500 6cd443af15103d015156547960c95a9e 87 Pfam PF02831 gpW 18 86 8.8E-23 T 28-03-2018 IPR004174 Head-to-tail joining protein W GO:0019058 CI104_RS11160 155f4bbf198f9b3eea214d30a69f36ba 530 TIGRFAM TIGR01539 portal_lambda: phage portal protein, lambda family 27 507 9.8E-136 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CI104_RS11160 155f4bbf198f9b3eea214d30a69f36ba 530 Pfam PF05136 Phage portal protein, lambda family 29 397 3.1E-94 T 28-03-2018 IPR006429 Phage portal protein, lambda family GO:0005198|GO:0019068 CI104_RS25370 11574441fc7edce7ad0aa66978185a70 278 Gene3D G3DSA:2.60.40.420 25 276 0.0023 T 28-03-2018 IPR008972 Cupredoxin CI104_RS10750 5524685ed60de993a46e77b3fef51eb1 498 Pfam PF06074 Protein of unknown function (DUF935) 27 493 7.8E-136 T 28-03-2018 IPR009279 Protein of unknown function DUF935 CI104_RS21515 4680ab1794290ae88979c90db081bc59 507 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 505 8.7E-152 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CI104_RS21515 4680ab1794290ae88979c90db081bc59 507 Pfam PF08666 SAF domain 13 81 3.5E-13 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS21515 4680ab1794290ae88979c90db081bc59 507 Gene3D G3DSA:3.90.1210.10 10 43 0.12 T 28-03-2018 CI104_RS21515 4680ab1794290ae88979c90db081bc59 507 SMART SM00858 13 82 1.1E-13 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS25540 c04a6b8cbe1713d6868b8acd568a0d49 326 Pfam PF05472 DNA replication terminus site-binding protein (Ter protein) 18 221 8.6E-19 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS25540 c04a6b8cbe1713d6868b8acd568a0d49 326 Gene3D G3DSA:3.50.14.10 11 209 1.2E-31 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS25540 c04a6b8cbe1713d6868b8acd568a0d49 326 SUPERFAMILY SSF56596 7 320 7.32E-91 T 28-03-2018 IPR008865 DNA replication terminus site-binding protein GO:0003677|GO:0005737|GO:0006274 CI104_RS00595 eabc6e8f0432c5cff183b7a00f888142 423 Pfam PF04932 O-Antigen ligase 203 354 5.0E-12 T 28-03-2018 IPR007016 O-antigen ligase-related CI104_RS25245 a14f9067df68218f766a6b087c1cae52 249 Gene3D G3DSA:3.90.470.20 10 140 1.3E-11 T 28-03-2018 IPR008278 4'-phosphopantetheinyl transferase superfamily GO:0000287|GO:0008897 KEGG: 00770+2.7.8.7|MetaCyc: PWY-6012|MetaCyc: PWY-6012-1|Reactome: R-HSA-199220 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 Gene3D G3DSA:1.20.1250.20 3 202 3.2E-36 T 28-03-2018 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 PRINTS PR01035 Tetracycline resistance protein signature 79 103 1.5E-10 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 PRINTS PR01035 Tetracycline resistance protein signature 136 158 1.5E-10 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 PRINTS PR01035 Tetracycline resistance protein signature 106 127 1.5E-10 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 PRINTS PR01035 Tetracycline resistance protein signature 341 364 1.5E-10 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 PRINTS PR01035 Tetracycline resistance protein signature 17 33 1.5E-10 T 28-03-2018 IPR001958 Tetracycline resistance protein TetA/multidrug resistance protein MdtG GO:0005215 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 Pfam PF07690 Major Facilitator Superfamily 11 236 5.7E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 SUPERFAMILY SSF103473 6 219 1.83E-39 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 Pfam PF00083 Sugar (and other) transporter 250 384 1.0E-6 T 28-03-2018 IPR005828 Major facilitator, sugar transporter-like GO:0016021|GO:0022857|GO:0055085 CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 SUPERFAMILY SSF103473 214 393 5.1E-28 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS06055 16422e0a4a35235e380babdb4bd8ea45 401 Gene3D G3DSA:1.20.1250.20 203 400 1.1E-25 T 28-03-2018 CI104_RS22910 896f34bd46d15a66bba73a23e56b881c 182 Pfam PF00419 Fimbrial protein 38 181 1.0E-17 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22910 896f34bd46d15a66bba73a23e56b881c 182 SUPERFAMILY SSF49401 32 181 1.04E-31 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22910 896f34bd46d15a66bba73a23e56b881c 182 Gene3D G3DSA:2.60.40.1090 25 182 6.9E-26 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS00550 99fd85c0f00e8ccec56b66407384c09f 374 SUPERFAMILY SSF53756 3 354 4.19E-64 T 28-03-2018 CI104_RS00550 99fd85c0f00e8ccec56b66407384c09f 374 Pfam PF00534 Glycosyl transferases group 1 184 350 9.5E-38 T 28-03-2018 IPR001296 Glycosyl transferase, family 1 CI104_RS00550 99fd85c0f00e8ccec56b66407384c09f 374 Pfam PF13439 Glycosyltransferase Family 4 13 173 1.5E-8 T 28-03-2018 IPR028098 Glycosyltransferase subfamily 4-like, N-terminal domain Reactome: R-HSA-446193 CI104_RS00550 99fd85c0f00e8ccec56b66407384c09f 374 Gene3D G3DSA:3.40.50.2000 2 182 1.8E-5 T 28-03-2018 CI104_RS00550 99fd85c0f00e8ccec56b66407384c09f 374 Gene3D G3DSA:3.40.50.2000 183 355 1.5E-37 T 28-03-2018 CI104_RS23230 a39bfa6b23788b2c5dd20096c98ccd72 229 Pfam PF04172 LrgB-like family 14 226 1.9E-67 T 28-03-2018 IPR007300 CidB/LrgB family CI104_RS21270 1edbd557aac75dd1e7c2497d05cb62e7 449 PIRSF PIRSF006351 10 445 1.7E-140 T 28-03-2018 IPR004796 Phosphotransferase system, cellobiose-type IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS21270 1edbd557aac75dd1e7c2497d05cb62e7 449 TIGRFAM TIGR00410 lacE: PTS system, lactose/cellobiose family IIC component 21 435 5.3E-111 T 28-03-2018 IPR004501 Phosphotransferase system, EIIC component, type 3 GO:0008982|GO:0009401|GO:0016021 CI104_RS21270 1edbd557aac75dd1e7c2497d05cb62e7 449 Pfam PF02378 Phosphotransferase system, EIIC 37 360 1.2E-56 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS13310 2387b552e8715bfb5fd54630337a5bb7 480 PIRSF PIRSF006060 23 479 1.2E-64 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS13310 2387b552e8715bfb5fd54630337a5bb7 480 ProSitePatterns PS00218 Amino acid permeases signature. 59 89 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS13310 2387b552e8715bfb5fd54630337a5bb7 480 Pfam PF00324 Amino acid permease 35 476 1.5E-127 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS21955 8d01106fea7b7a2d6accf3ac179b4375 439 Pfam PF02447 GntP family permease 1 435 1.3E-181 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS21955 8d01106fea7b7a2d6accf3ac179b4375 439 PIRSF PIRSF002746 1 439 2.4E-156 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS21955 8d01106fea7b7a2d6accf3ac179b4375 439 TIGRFAM TIGR00791 gntP: transporter, gluconate:H+ symporter (GntP) family 1 438 8.6E-197 T 28-03-2018 IPR003474 Gluconate transporter GO:0015128|GO:0016020|GO:0035429 CI104_RS03440 11dac348505e0cd2d20c9fe7a8722c35 66 Pfam PF10893 Protein of unknown function (DUF2724) 1 38 3.8E-21 T 28-03-2018 IPR021221 Bacteriophage 186, Fil CI104_RS24820 4791d9de50909f00b87273a91b21c6f6 848 Pfam PF01295 Adenylate cyclase, class-I 228 825 2.1E-258 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CI104_RS24820 4791d9de50909f00b87273a91b21c6f6 848 ProSitePatterns PS01093 Adenylate cyclase class-I signature 2. 598 612 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CI104_RS24820 4791d9de50909f00b87273a91b21c6f6 848 PIRSF PIRSF001444 1 848 0.0 T 28-03-2018 IPR000274 Adenylate cyclase, class-I GO:0004016|GO:0006171 KEGG: 00230+4.6.1.1 CI104_RS24820 4791d9de50909f00b87273a91b21c6f6 848 ProSitePatterns PS01092 Adenylate cyclase class-I signature 1. 242 253 - T 28-03-2018 IPR024686 Adenylate cyclase class-I, conserved site KEGG: 00230+4.6.1.1 CI104_RS24820 4791d9de50909f00b87273a91b21c6f6 848 Pfam PF12633 Adenylate cyclase NT domain 5 200 2.0E-80 T 28-03-2018 IPR024685 Adenylate cyclase class-I, N-terminal domain KEGG: 00230+4.6.1.1 CI104_RS23225 b0242077af64140cbe9d5bff1e2d1bb5 549 ProSitePatterns PS00456 Sodium:solute symporter family signature 1. 178 203 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS23225 b0242077af64140cbe9d5bff1e2d1bb5 549 ProSitePatterns PS00457 Sodium:solute symporter family signature 2. 450 470 - T 28-03-2018 IPR018212 Sodium/solute symporter, conserved site GO:0005215|GO:0006810|GO:0016020 CI104_RS23225 b0242077af64140cbe9d5bff1e2d1bb5 549 TIGRFAM TIGR02711 symport_actP: cation/acetate symporter ActP 2 549 0.0 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CI104_RS23225 b0242077af64140cbe9d5bff1e2d1bb5 549 TIGRFAM TIGR00813 sss: transporter, solute:sodium symporter (SSS) family 63 466 2.8E-63 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS23225 b0242077af64140cbe9d5bff1e2d1bb5 549 Hamap MF_01426 Cation/acetate symporter ActP [actP]. 1 549 59.518 T 28-03-2018 IPR014083 Cation/acetate symporter ActP GO:0005887|GO:0015123|GO:0043879 CI104_RS23225 b0242077af64140cbe9d5bff1e2d1bb5 549 Pfam PF00474 Sodium:solute symporter family 63 468 7.5E-138 T 28-03-2018 IPR001734 Sodium/solute symporter GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS05615 f18aa02943aa216e9ad1ddd4eafed611 159 TIGRFAM TIGR03352 VI_chp_3: type VI secretion lipoprotein, VC_A0113 family 3 129 3.6E-37 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CI104_RS05615 f18aa02943aa216e9ad1ddd4eafed611 159 Pfam PF12790 Type VI secretion lipoprotein, VasD, EvfM, TssJ, VC_A0113 3 128 7.3E-40 T 28-03-2018 IPR017734 Type VI secretion system, lipoprotein SciN CI104_RS06705 2eb79bee4d5ec401ec08c6c8e693d445 574 SUPERFAMILY SSF69349 340 521 1.02E-14 T 28-03-2018 CI104_RS06705 2eb79bee4d5ec401ec08c6c8e693d445 574 Gene3D G3DSA:2.40.50.230 260 347 4.2E-11 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS06705 2eb79bee4d5ec401ec08c6c8e693d445 574 SUPERFAMILY SSF69255 257 348 3.66E-15 T 28-03-2018 CI104_RS17470 9d2e66d27cbbb565242cf599c388e32d 101 Pfam PF05957 Bacterial protein of unknown function (DUF883) 9 101 5.8E-30 T 28-03-2018 IPR010279 Protein of unknown function DUF883, ElaB CI104_RS11365 865b82180efff36883d436a91e19c26e 126 Gene3D G3DSA:2.10.109.10 2 117 2.3E-11 T 28-03-2018 CI104_RS11365 865b82180efff36883d436a91e19c26e 126 SUPERFAMILY SSF51306 1 113 4.88E-16 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS15605 6b750626d12db2c9e9676c71b94dc03b 167 SUPERFAMILY SSF47240 6 157 4.3E-33 T 28-03-2018 IPR009078 Ferritin-like superfamily CI104_RS15605 6b750626d12db2c9e9676c71b94dc03b 167 Pfam PF00210 Ferritin-like domain 9 142 9.7E-23 T 28-03-2018 IPR008331 Ferritin/DPS protein domain GO:0006879|GO:0008199 CI104_RS15605 6b750626d12db2c9e9676c71b94dc03b 167 Gene3D G3DSA:1.20.1260.10 4 162 7.3E-22 T 28-03-2018 IPR012347 Ferritin-related CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 TIGRFAM TIGR00242 TIGR00242: division/cell wall cluster transcriptional repressor MraZ 1 152 2.2E-65 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 SUPERFAMILY SSF89447 1 135 2.2E-45 T 28-03-2018 CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 Gene3D G3DSA:2.10.260.10 3 39 0.036 T 28-03-2018 CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 Gene3D G3DSA:2.10.260.10 81 126 0.0011 T 28-03-2018 CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 Hamap MF_01008 Transcriptional regulator MraZ [mraZ]. 1 152 57.808 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 Pfam PF02381 MraZ protein, putative antitoxin-like 77 136 8.1E-20 T 28-03-2018 IPR020603 MraZ domain CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 Pfam PF02381 MraZ protein, putative antitoxin-like 1 75 2.2E-24 T 28-03-2018 IPR020603 MraZ domain CI104_RS04855 530832aafb0b1988e2641573ec4fbd80 152 ProDom PD006745 MRAZ YABB DIVISION CELL 3D-STRUCTURE UNCHARACTERIZED BCR SIMILAR PROTEIN 1 139 3.0E-76 T 28-03-2018 IPR003444 Transcriptional regulator MraZ GO:0003700|GO:0006355 CI104_RS13045 a75839f4345f8fc366b4b0ae2e561024 370 Gene3D G3DSA:3.40.50.1820 4 358 3.5E-5 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS13045 a75839f4345f8fc366b4b0ae2e561024 370 Pfam PF09994 Uncharacterized alpha/beta hydrolase domain (DUF2235) 3 256 2.1E-74 T 28-03-2018 IPR018712 Domain of unknown function DUF2235 CI104_RS13045 a75839f4345f8fc366b4b0ae2e561024 370 SUPERFAMILY SSF53474 4 119 2.64E-6 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS03650 3b81adb93551c58a623e72033f9f9815 665 Gene3D G3DSA:2.40.170.20 172 665 1.6E-69 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS03650 3b81adb93551c58a623e72033f9f9815 665 SUPERFAMILY SSF56935 24 665 3.66E-112 T 28-03-2018 CI104_RS03650 3b81adb93551c58a623e72033f9f9815 665 Pfam PF00593 TonB dependent receptor 188 663 1.9E-56 T 28-03-2018 IPR000531 TonB-dependent receptor, beta-barrel GO:0004872|GO:0006810|GO:0016020 CI104_RS03650 3b81adb93551c58a623e72033f9f9815 665 Gene3D G3DSA:2.170.130.10 23 166 1.3E-32 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS03650 3b81adb93551c58a623e72033f9f9815 665 Pfam PF07715 TonB-dependent Receptor Plug Domain 46 159 9.9E-26 T 28-03-2018 IPR012910 TonB-dependent receptor, plug domain GO:0004872|GO:0006810|GO:0016020 CI104_RS07830 d3a4f06d8fd53166f2a92ea19fcbcb61 247 Gene3D G3DSA:3.40.1390.30 1 109 1.5E-28 T 28-03-2018 CI104_RS07830 d3a4f06d8fd53166f2a92ea19fcbcb61 247 TIGRFAM TIGR00486 YbgI_SA1388: dinuclear metal center protein, YbgI/SA1388 family 1 246 4.5E-83 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CI104_RS07830 d3a4f06d8fd53166f2a92ea19fcbcb61 247 Gene3D G3DSA:3.40.1390.30 110 218 8.5E-33 T 28-03-2018 CI104_RS07830 d3a4f06d8fd53166f2a92ea19fcbcb61 247 Pfam PF01784 NIF3 (NGG1p interacting factor 3) 6 234 1.1E-58 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CI104_RS07830 d3a4f06d8fd53166f2a92ea19fcbcb61 247 SUPERFAMILY SSF102705 1 246 2.75E-85 T 28-03-2018 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CI104_RS05045 b8a6c48c7facf69da82012649744dacd 317 Hamap MF_00070 2-keto-3-deoxygluconate permease [kdgT]. 1 312 32.326 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS05045 b8a6c48c7facf69da82012649744dacd 317 ProDom PD024513 PERMEASE 2-KETO-3-DEOXYGLUCONATE MEMBRANE TRANSMEMBRANE SUGAR KDG SYMPORT INNER 2-KETO-3-DEOXY-D-GLUCONATE SYSTEM 14 314 6.0E-102 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS05045 b8a6c48c7facf69da82012649744dacd 317 Pfam PF03812 2-keto-3-deoxygluconate permease 3 306 2.9E-123 T 28-03-2018 IPR004684 2-keto-3-deoxygluconate permease GO:0008643|GO:0015649|GO:0016021|GO:0046411 CI104_RS06335 61e9b79e28e07ea447fa16e18f2a87a3 262 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 3 192 2.1E-24 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CI104_RS06335 61e9b79e28e07ea447fa16e18f2a87a3 262 Gene3D G3DSA:1.20.1630.10 1 259 4.3E-36 T 28-03-2018 CI104_RS05030 0d0a404bdb465d651bf1f8301cb317f4 543 Pfam PF11737 Protein of unknown function (DUF3300) 60 333 2.5E-86 T 28-03-2018 IPR021728 Protein of unknown function DUF3300 CI104_RS06775 60efdfab8ad8a0621e3e93416a9e9f64 151 Pfam PF10772 Protein of unknown function (DUF2597) 9 141 8.2E-53 T 28-03-2018 IPR019708 Bacteriophage HP1, Orf24 CI104_RS01285 0b4294b38344665fb7d3fb4f2b6674f1 772 Gene3D G3DSA:1.20.1640.10 596 707 1.8E-8 T 28-03-2018 CI104_RS01285 0b4294b38344665fb7d3fb4f2b6674f1 772 Gene3D G3DSA:1.20.1640.10 207 405 2.6E-21 T 28-03-2018 CI104_RS01285 0b4294b38344665fb7d3fb4f2b6674f1 772 Gene3D G3DSA:1.20.1640.10 714 765 0.13 T 28-03-2018 CI104_RS01285 0b4294b38344665fb7d3fb4f2b6674f1 772 SUPERFAMILY SSF82866 224 403 2.75E-20 T 28-03-2018 CI104_RS01285 0b4294b38344665fb7d3fb4f2b6674f1 772 SUPERFAMILY SSF82866 637 764 1.14E-15 T 28-03-2018 CI104_RS01285 0b4294b38344665fb7d3fb4f2b6674f1 772 Pfam PF03176 MMPL family 251 401 2.4E-9 T 28-03-2018 IPR004869 Membrane transport protein MMPL domain GO:0016020 CI104_RS01435 3294ff34f2ad4ab189d09f65c5bf7481 180 Pfam PF04011 LemA family 8 176 2.2E-56 T 28-03-2018 IPR007156 LemA CI104_RS01435 3294ff34f2ad4ab189d09f65c5bf7481 180 SUPERFAMILY SSF140478 25 169 2.22E-46 T 28-03-2018 IPR023353 LemA-like domain CI104_RS01435 3294ff34f2ad4ab189d09f65c5bf7481 180 Gene3D G3DSA:1.20.1440.20 12 180 1.6E-53 T 28-03-2018 CI104_RS04575 b8d49c38909312244292c228c4297e95 260 Pfam PF06560 Glucose-6-phosphate isomerase (GPI) 53 205 6.6E-17 T 28-03-2018 IPR010551 Glucose-6-phosphate isomerase, prokaryote GO:0004347|GO:0005737|GO:0006094|GO:0006096 KEGG: 00010+5.3.1.9|KEGG: 00030+5.3.1.9|KEGG: 00500+5.3.1.9|KEGG: 00520+5.3.1.9|MetaCyc: PWY-3801|MetaCyc: PWY-5054|MetaCyc: PWY-5384|MetaCyc: PWY-5514|MetaCyc: PWY-5659|MetaCyc: PWY-6142|MetaCyc: PWY-621|MetaCyc: PWY-622|MetaCyc: PWY-6981|MetaCyc: PWY-6992|MetaCyc: PWY-7238|MetaCyc: PWY-7347|MetaCyc: PWY-7385 CI104_RS04575 b8d49c38909312244292c228c4297e95 260 SUPERFAMILY SSF51182 27 203 1.07E-23 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS04575 b8d49c38909312244292c228c4297e95 260 Gene3D G3DSA:2.60.120.10 23 210 7.8E-17 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 SUPERFAMILY SSF51905 5 175 2.85E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 SUPERFAMILY SSF51905 272 360 2.85E-62 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 154 169 6.5E-18 T 28-03-2018 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 6 28 6.5E-18 T 28-03-2018 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 300 316 6.5E-18 T 28-03-2018 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 285 300 6.5E-18 T 28-03-2018 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 PRINTS PR00420 Aromatic-ring hydroxylase (flavoprotein monooxygenase) signature 334 350 6.5E-18 T 28-03-2018 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 Pfam PF01494 FAD binding domain 7 346 8.5E-28 T 28-03-2018 IPR002938 FAD-binding domain GO:0071949 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 Gene3D G3DSA:3.50.50.60 5 231 8.1E-31 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 Gene3D G3DSA:3.50.50.60 242 354 1.2E-14 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS16805 228ad0e2eecbdbb82ca007dc4f7d4a15 397 SUPERFAMILY SSF54373 179 277 1.57E-14 T 28-03-2018 CI104_RS02765 2f3731732d5eaaa460279f0b3bd63b76 95 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 81 6.3E-35 T 28-03-2018 CI104_RS02765 2f3731732d5eaaa460279f0b3bd63b76 95 Gene3D G3DSA:1.10.260.40 1 73 2.8E-12 T 28-03-2018 CI104_RS02765 2f3731732d5eaaa460279f0b3bd63b76 95 SUPERFAMILY SSF47413 3 71 9.56E-29 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS09270 401ef372c3a9f66d1cc27b17e272c91b 148 Pfam PF03733 Inner membrane component domain 4 53 4.5E-9 T 28-03-2018 IPR005185 Inner membrane component domain CI104_RS09270 401ef372c3a9f66d1cc27b17e272c91b 148 Pfam PF03733 Inner membrane component domain 77 127 1.2E-17 T 28-03-2018 IPR005185 Inner membrane component domain CI104_RS09270 401ef372c3a9f66d1cc27b17e272c91b 148 PIRSF PIRSF028777 1 139 1.5E-53 T 28-03-2018 IPR031308 Uncharacterised conserved protein UCP028777 CI104_RS16315 ea34d8e8c727ea16bd16e797ba282014 75 Gene3D G3DSA:3.30.110.40 2 75 2.6E-18 T 28-03-2018 IPR001455 TusA-like domain CI104_RS16315 ea34d8e8c727ea16bd16e797ba282014 75 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 6 30 - T 28-03-2018 IPR001455 TusA-like domain CI104_RS16315 ea34d8e8c727ea16bd16e797ba282014 75 Pfam PF01206 Sulfurtransferase TusA 4 74 1.8E-18 T 28-03-2018 IPR001455 TusA-like domain CI104_RS16315 ea34d8e8c727ea16bd16e797ba282014 75 SUPERFAMILY SSF64307 3 74 2.62E-21 T 28-03-2018 IPR001455 TusA-like domain CI104_RS12115 5eb1010bc97143008e65445550151e83 62 Pfam PF15930 Domain of unknown function 1 62 6.2E-39 T 28-03-2018 IPR031830 Uncharacterised protein YdiH CI104_RS04605 64e89e6e2130242fed0b259122283299 335 SUPERFAMILY SSF53822 64 333 6.9E-70 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS04605 64e89e6e2130242fed0b259122283299 335 Pfam PF00532 Periplasmic binding proteins and sugar binding domain of LacI family 62 323 4.2E-38 T 28-03-2018 IPR001761 Periplasmic binding protein/LacI sugar binding domain CI104_RS04605 64e89e6e2130242fed0b259122283299 335 Pfam PF00356 Bacterial regulatory proteins, lacI family 5 50 2.9E-17 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS04605 64e89e6e2130242fed0b259122283299 335 SMART SM00354 3 73 1.2E-25 T 28-03-2018 IPR000843 LacI-type HTH domain GO:0003677|GO:0006355 CI104_RS04605 64e89e6e2130242fed0b259122283299 335 Gene3D G3DSA:3.40.50.2300 169 334 5.0E-51 T 28-03-2018 CI104_RS04605 64e89e6e2130242fed0b259122283299 335 Gene3D G3DSA:1.10.260.40 4 59 2.7E-22 T 28-03-2018 CI104_RS04605 64e89e6e2130242fed0b259122283299 335 SUPERFAMILY SSF47413 3 61 1.43E-17 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS04605 64e89e6e2130242fed0b259122283299 335 Gene3D G3DSA:3.40.50.2300 60 168 1.0E-27 T 28-03-2018 CI104_RS11470 7d012041f116bff5fe27638cc118e82b 269 Pfam PF08241 Methyltransferase domain 48 146 1.9E-20 T 28-03-2018 IPR013216 Methyltransferase type 11 GO:0008152|GO:0008168 CI104_RS11470 7d012041f116bff5fe27638cc118e82b 269 Gene3D G3DSA:3.40.50.150 2 238 7.5E-29 T 28-03-2018 CI104_RS11470 7d012041f116bff5fe27638cc118e82b 269 SUPERFAMILY SSF53335 22 223 1.69E-34 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS05715 f53ee2de96d65ca971bdf2a43c01df38 192 SUPERFAMILY SSF53697 1 189 3.64E-52 T 28-03-2018 CI104_RS05715 f53ee2de96d65ca971bdf2a43c01df38 192 Pfam PF13580 SIS domain 12 146 6.3E-32 T 28-03-2018 IPR001347 Sugar isomerase (SIS) GO:0097367|GO:1901135 CI104_RS05715 f53ee2de96d65ca971bdf2a43c01df38 192 Hamap MF_00067 Phosphoheptose isomerase [gmhA]. 1 190 38.899 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CI104_RS05715 f53ee2de96d65ca971bdf2a43c01df38 192 Gene3D G3DSA:3.40.50.10490 1 192 2.9E-42 T 28-03-2018 CI104_RS05715 f53ee2de96d65ca971bdf2a43c01df38 192 TIGRFAM TIGR00441 gmhA: phosphoheptose isomerase 35 187 4.8E-85 T 28-03-2018 IPR004515 Phosphoheptose isomerase GO:0005737|GO:0008968 KEGG: 00540+5.3.1.28|MetaCyc: PWY-6478 CI104_RS27710 f15a60fa71a1d4a79ba2f0869a2cc115 617 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 10 608 3.4E-164 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CI104_RS27710 f15a60fa71a1d4a79ba2f0869a2cc115 617 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 322 568 8.3E-81 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CI104_RS21660 86e04e63a8a580cebd72950f35f408ef 538 Gene3D G3DSA:2.115.10.20 2 328 3.5E-79 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS21660 86e04e63a8a580cebd72950f35f408ef 538 SUPERFAMILY SSF75005 5 321 5.71E-97 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS21660 86e04e63a8a580cebd72950f35f408ef 538 Gene3D G3DSA:2.60.120.200 329 537 8.5E-44 T 28-03-2018 CI104_RS21660 86e04e63a8a580cebd72950f35f408ef 538 SUPERFAMILY SSF49899 331 535 2.14E-66 T 28-03-2018 IPR013320 Concanavalin A-like lectin/glucanase domain CI104_RS21660 86e04e63a8a580cebd72950f35f408ef 538 Pfam PF04616 Glycosyl hydrolases family 43 4 304 4.3E-104 T 28-03-2018 IPR006710 Glycoside hydrolase, family 43 GO:0004553|GO:0005975 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 Pfam PF01741 Large-conductance mechanosensitive channel, MscL 4 130 6.0E-46 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 ProSitePatterns PS01327 Large-conductance mechanosensitive channels mscL family signature. 13 26 - T 28-03-2018 IPR019823 Large-conductance mechanosensitive channel, conserved site CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 SUPERFAMILY SSF81330 12 126 2.22E-36 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 TIGRFAM TIGR00220 mscL: large conductance mechanosensitive channel protein 3 132 1.3E-60 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 Gene3D G3DSA:1.20.5.220 118 133 1.9E-4 T 28-03-2018 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 Hamap MF_00115 Large-conductance mechanosensitive channel [mscL]. 3 133 31.264 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 84 92 1.3E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 93 102 1.3E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS02195 d8739f27b39dcdf25c873d26663f027d 136 PRINTS PR01264 Bacterial mechano-sensitive ion channel signature 6 20 1.3E-14 T 28-03-2018 IPR001185 Large-conductance mechanosensitive channel GO:0005216|GO:0006810|GO:0016021 CI104_RS01335 c0f1d2eb8e9705f350dbe2d72db3e705 240 Pfam PF13723 Beta-ketoacyl synthase, N-terminal domain 23 238 1.5E-65 T 28-03-2018 IPR014030 Beta-ketoacyl synthase, N-terminal CI104_RS11590 e299a69c15bb1da53ae766b8a1d65456 167 SUPERFAMILY SSF55826 10 162 4.97E-34 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS11590 e299a69c15bb1da53ae766b8a1d65456 167 Gene3D G3DSA:3.90.960.10 4 167 1.2E-35 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS11590 e299a69c15bb1da53ae766b8a1d65456 167 Pfam PF04073 Aminoacyl-tRNA editing domain 30 154 8.1E-25 T 28-03-2018 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain GO:0002161 KEGG: 00970+6.1.1.15 CI104_RS13220 3ffcb0a9d7285a9b5e77084a2942ae55 462 Pfam PF07690 Major Facilitator Superfamily 43 373 2.6E-11 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS13220 3ffcb0a9d7285a9b5e77084a2942ae55 462 TIGRFAM TIGR00886 2A0108: nitrite transporter 34 415 4.1E-102 T 28-03-2018 IPR004737 Nitrate transporter GO:0015112|GO:0015113|GO:0015706|GO:0015707|GO:0016021 CI104_RS13220 3ffcb0a9d7285a9b5e77084a2942ae55 462 SUPERFAMILY SSF103473 18 460 8.63E-38 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS13220 3ffcb0a9d7285a9b5e77084a2942ae55 462 Gene3D G3DSA:1.20.1250.20 17 234 2.9E-15 T 28-03-2018 CI104_RS13220 3ffcb0a9d7285a9b5e77084a2942ae55 462 Gene3D G3DSA:1.20.1250.20 242 462 1.6E-20 T 28-03-2018 CI104_RS05560 642fadf290cce8146441ec20347af42a 276 SUPERFAMILY SSF144059 11 270 1.7E-89 T 28-03-2018 CI104_RS05560 642fadf290cce8146441ec20347af42a 276 PIRSF PIRSF029288 1 273 1.3E-107 T 28-03-2018 IPR009211 Predicted virulence protein, SciE type CI104_RS05560 642fadf290cce8146441ec20347af42a 276 Pfam PF07024 ImpE protein 147 267 4.0E-40 T 28-03-2018 IPR009211 Predicted virulence protein, SciE type CI104_RS05560 642fadf290cce8146441ec20347af42a 276 Gene3D G3DSA:1.25.40.10 7 145 3.2E-5 T 28-03-2018 IPR011990 Tetratricopeptide-like helical domain GO:0005515 CI104_RS07260 c51717db84244d03f369c9d2b38bef61 276 SUPERFAMILY SSF52518 7 273 2.03E-73 T 28-03-2018 IPR029061 Thiamin diphosphate-binding fold CI104_RS07260 c51717db84244d03f369c9d2b38bef61 276 Pfam PF00456 Transketolase, thiamine diphosphate binding domain 31 268 8.1E-38 T 28-03-2018 IPR005474 Transketolase, N-terminal KEGG: 00730+2.2.1.7|KEGG: 00900+2.2.1.7|MetaCyc: PWY-6891|MetaCyc: PWY-6892|MetaCyc: PWY-7560 CI104_RS07260 c51717db84244d03f369c9d2b38bef61 276 Gene3D G3DSA:3.40.50.970 4 276 3.8E-61 T 28-03-2018 CI104_RS28360 864708d9e5f5534973f75f3854e3baf9 129 TIGRFAM TIGR02744 TrbI_Ftype: type-F conjugative transfer system protein TrbI 17 126 3.4E-40 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CI104_RS28360 864708d9e5f5534973f75f3854e3baf9 129 Pfam PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) 22 125 6.3E-41 T 28-03-2018 IPR014115 Type-F conjugative transfer system protein TrbI CI104_RS02435 6c7e29b53233a965e00eafe88cad4342 199 Pfam PF01794 Ferric reductase like transmembrane component 48 161 1.1E-14 T 28-03-2018 IPR013130 Ferric reductase transmembrane component-like domain CI104_RS02435 6c7e29b53233a965e00eafe88cad4342 199 Hamap MF_01207 Protein-methionine-sulfoxide reductase heme-binding subunit MsrQ [msrQ]. 3 199 21.962 T 28-03-2018 IPR022837 Protein-methionine-sulfoxide reductase subunit MsrQ GO:0005887|GO:0030091 CI104_RS00625 27ead1e131d14c7e0fa933b03f62bc11 344 Pfam PF00535 Glycosyl transferase family 2 9 138 1.6E-32 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS00625 27ead1e131d14c7e0fa933b03f62bc11 344 SUPERFAMILY SSF53448 8 226 2.63E-52 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS00625 27ead1e131d14c7e0fa933b03f62bc11 344 Gene3D G3DSA:3.90.550.10 3 282 1.8E-48 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS26290 dec658130857a0da3dedda478cca9266 90 Pfam PF02583 Metal-sensitive transcriptional repressor 7 85 5.8E-20 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CI104_RS13660 2df72f47a6899cc00e23cb1ea924fee0 63 ProDom PD052969 LIPOPROTEIN PRECURSOR SIGNAL YNBE MEMBRANE OUTER POSSIBLE SIMILAR ECS2004 SO2063 16 63 1.0E-19 T 28-03-2018 CI104_RS13660 2df72f47a6899cc00e23cb1ea924fee0 63 Pfam PF13617 YnbE-like lipoprotein 7 61 5.8E-29 T 28-03-2018 IPR025985 YnbE-like lipoprotein CI104_RS08650 1534b40eaeb626a58128e75ba9e3850a 178 SUPERFAMILY SSF48498 96 173 3.56E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS08650 1534b40eaeb626a58128e75ba9e3850a 178 Gene3D G3DSA:1.10.357.10 1 177 2.3E-32 T 28-03-2018 CI104_RS08650 1534b40eaeb626a58128e75ba9e3850a 178 SUPERFAMILY SSF46689 2 78 1.9E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS08650 1534b40eaeb626a58128e75ba9e3850a 178 Pfam PF00440 Bacterial regulatory proteins, tetR family 13 58 1.6E-9 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS13435 d0fa3f4ad701edafb8270ed7aa659bb9 336 PIRSF PIRSF000267 2 336 5.4E-90 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS13435 d0fa3f4ad701edafb8270ed7aa659bb9 336 Pfam PF02322 Cytochrome bd terminal oxidase subunit II 5 325 2.5E-99 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS13435 d0fa3f4ad701edafb8270ed7aa659bb9 336 TIGRFAM TIGR00203 cydB: cytochrome d ubiquinol oxidase, subunit II 5 330 2.8E-49 T 28-03-2018 IPR003317 Cytochrome ubiquinol oxidase subunit 2 GO:0016020|GO:0055114 CI104_RS03875 2158e70b37d66efe6c0c655618a1a9b2 396 SUPERFAMILY SSF48208 27 396 5.83E-118 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS03875 2158e70b37d66efe6c0c655618a1a9b2 396 Pfam PF07470 Glycosyl Hydrolase Family 88 62 388 6.7E-34 T 28-03-2018 IPR010905 Glycosyl hydrolase, family 88 CI104_RS03875 2158e70b37d66efe6c0c655618a1a9b2 396 Gene3D G3DSA:1.50.10.10 26 396 7.1E-92 T 28-03-2018 CI104_RS19780 ab6b58afead95939e1db250ed75adfa4 484 Pfam PF00367 phosphotransferase system, EIIB 11 43 3.7E-15 T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS19780 ab6b58afead95939e1db250ed75adfa4 484 Gene3D G3DSA:3.30.1360.60 6 82 3.3E-28 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS19780 ab6b58afead95939e1db250ed75adfa4 484 TIGRFAM TIGR00852 pts-Glc: PTS system, maltose and glucose-specific subfamily, IIC component 154 441 1.4E-87 T 28-03-2018 IPR004719 Phosphotransferase system, maltose/glucose-specific subfamily IIC component GO:0008982|GO:0009401|GO:0016021 CI104_RS19780 ab6b58afead95939e1db250ed75adfa4 484 SUPERFAMILY SSF55604 8 82 1.44E-22 T 28-03-2018 IPR001996 Phosphotransferase system, IIB component, type 1 GO:0008982|GO:0009401 CI104_RS19780 ab6b58afead95939e1db250ed75adfa4 484 ProSitePatterns PS01035 PTS EIIB domains cysteine phosphorylation site signature. 21 38 - T 28-03-2018 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site GO:0008982 CI104_RS19780 ab6b58afead95939e1db250ed75adfa4 484 Pfam PF02378 Phosphotransferase system, EIIC 113 396 8.3E-43 T 28-03-2018 IPR003352 Phosphotransferase system, EIIC GO:0008982|GO:0009401|GO:0016020 CI104_RS25325 cf947b8e7f913d2a2217fb0b9fa6688f 451 Gene3D G3DSA:2.130.10.10 35 392 3.8E-5 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS25325 cf947b8e7f913d2a2217fb0b9fa6688f 451 Pfam PF03743 Bacterial conjugation TrbI-like protein 241 442 3.0E-24 T 28-03-2018 IPR005498 Type IV secretion system, VirB10 / TraB / TrbI CI104_RS18455 57a298197121f4ed554a59c63f919e10 429 TIGRFAM TIGR00801 ncs2: uracil-xanthine permease 11 405 3.7E-131 T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS18455 57a298197121f4ed554a59c63f919e10 429 ProSitePatterns PS01116 Xanthine/uracil permeases family signature. 329 349 - T 28-03-2018 IPR006042 Xanthine/uracil permease GO:0005215|GO:0016020|GO:0055085 Reactome: R-HSA-196836 CI104_RS18455 57a298197121f4ed554a59c63f919e10 429 Pfam PF00860 Permease family 16 383 8.8E-108 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS08680 0903efc30146942880d4a906f3c770a8 125 Pfam PF11045 Putative inner membrane protein of Enterobacteriaceae 4 117 4.3E-45 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CI104_RS08680 0903efc30146942880d4a906f3c770a8 125 ProDom PD079046 MEMBRANE INNER YBJM TRANSMEMBRANE 1 117 4.0E-36 T 28-03-2018 IPR020368 Uncharacterised protein family YbjM GO:0016021 CI104_RS16150 b86bc34a2698c16c5fe059b8c1251482 201 TIGRFAM TIGR02467 CbiE: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 4 195 9.1E-62 T 28-03-2018 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase GO:0008276|GO:0009236 CI104_RS16150 b86bc34a2698c16c5fe059b8c1251482 201 Pfam PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases 1 179 4.4E-27 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16150 b86bc34a2698c16c5fe059b8c1251482 201 SUPERFAMILY SSF53790 1 198 6.94E-43 T 28-03-2018 IPR000878 Tetrapyrrole methylase GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16150 b86bc34a2698c16c5fe059b8c1251482 201 Gene3D G3DSA:3.30.950.10 112 201 1.6E-21 T 28-03-2018 IPR014776 Tetrapyrrole methylase, subdomain 2 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS16150 b86bc34a2698c16c5fe059b8c1251482 201 Gene3D G3DSA:3.40.1010.10 1 111 5.1E-23 T 28-03-2018 IPR014777 Tetrapyrrole methylase, subdomain 1 GO:0008152|GO:0008168 Reactome: R-HSA-5358493 CI104_RS01380 1231b89ed95b391feff555971186f3da 208 Pfam PF07947 YhhN family 26 206 1.2E-40 T 28-03-2018 IPR012506 YhhN-like GO:0016021 CI104_RS16910 2fcf58fc2a072efc7dbc2e73b4de8fe0 489 ProSitePatterns PS00218 Amino acid permeases signature. 46 77 - T 28-03-2018 IPR004840 Amino acid permease, conserved site GO:0006865|GO:0016021|GO:0055085 CI104_RS16910 2fcf58fc2a072efc7dbc2e73b4de8fe0 489 PIRSF PIRSF006060 1 486 2.2E-78 T 28-03-2018 IPR002293 Amino acid/polyamine transporter I GO:0003333|GO:0015171|GO:0016020 CI104_RS16910 2fcf58fc2a072efc7dbc2e73b4de8fe0 489 Pfam PF00324 Amino acid permease 21 474 2.9E-144 T 28-03-2018 IPR004841 Amino acid permease/ SLC12A domain GO:0006810|GO:0016020|GO:0055085 CI104_RS05680 fab16d8a3dcab17bd83b8ff384df7d0d 147 SUPERFAMILY SSF55724 3 145 2.82E-41 T 28-03-2018 IPR016123 Mog1/PsbP, alpha/beta/alpha sandwich Reactome: R-HSA-5576892 CI104_RS05680 fab16d8a3dcab17bd83b8ff384df7d0d 147 Gene3D G3DSA:3.40.1000.10 1 147 9.1E-18 T 28-03-2018 CI104_RS05680 fab16d8a3dcab17bd83b8ff384df7d0d 147 Pfam PF08786 DcrB 9 140 5.1E-35 T 28-03-2018 IPR014894 Protein DcrB CI104_RS10160 53b81b63254267345350213ed6ab6c30 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 9.1E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat CI104_RS10160 53b81b63254267345350213ed6ab6c30 57 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 3.0E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat CI104_RS27465 267dd8ea3309e23fedde1d8bb7ac7410 216 Pfam PF02517 CAAX protease self-immunity 114 205 5.4E-13 T 28-03-2018 IPR003675 CAAX amino terminal protease GO:0016020 Reactome: R-HSA-5689880 CI104_RS11285 f519db4075e6ec0a7220d587535bbfba 132 SUPERFAMILY SSF143749 2 131 2.88E-47 T 28-03-2018 IPR009312 Minor tail protein U-like CI104_RS11285 f519db4075e6ec0a7220d587535bbfba 132 Pfam PF06141 Phage minor tail protein U 1 130 1.9E-46 T 28-03-2018 IPR009312 Minor tail protein U-like CI104_RS27185 340dbd61bfb2c04064aa535baef9e7cb 90 Gene3D G3DSA:1.10.10.10 48 89 8.2E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27185 340dbd61bfb2c04064aa535baef9e7cb 90 Pfam PF12759 InsA C-terminal domain 43 88 4.8E-30 T 28-03-2018 IPR024431 Insertion element IS1 protein InsA, helix-turn-helix domain CI104_RS27185 340dbd61bfb2c04064aa535baef9e7cb 90 Pfam PF03811 InsA N-terminal domain 2 36 4.6E-19 T 28-03-2018 IPR003220 InsA N-terminal domain GO:0006313 CI104_RS07870 8f14af93ec18ca21d0ab89546168c6d6 348 PIRSF PIRSF038991 1 348 1.1E-92 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CI104_RS07870 8f14af93ec18ca21d0ab89546168c6d6 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 6 161 2.0E-39 T 28-03-2018 IPR017516 AbrB duplication CI104_RS07870 8f14af93ec18ca21d0ab89546168c6d6 348 TIGRFAM TIGR03082 Gneg_AbrB_dup: membrane protein AbrB duplication 184 339 2.4E-44 T 28-03-2018 IPR017516 AbrB duplication CI104_RS07870 8f14af93ec18ca21d0ab89546168c6d6 348 Pfam PF05145 Transition state regulatory protein AbrB 29 339 2.3E-94 T 28-03-2018 IPR007820 AbrB family GO:0010468|GO:0016021 CI104_RS15390 701cd3992d6527e34716316d84d92038 188 Pfam PF00857 Isochorismatase family 9 183 5.6E-38 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS15390 701cd3992d6527e34716316d84d92038 188 Gene3D G3DSA:3.40.50.850 1 188 2.1E-45 T 28-03-2018 CI104_RS15390 701cd3992d6527e34716316d84d92038 188 SUPERFAMILY SSF52499 3 188 8.77E-50 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS23710 b93cecb8d2b5e5fd1a9ce59b79920c30 162 Hamap MF_01181 Regulator of sigma D [rsd]. 1 151 40.743 T 28-03-2018 IPR023785 Regulator of RNA polymerase sigma(70) subunit, Rsd CI104_RS23710 b93cecb8d2b5e5fd1a9ce59b79920c30 162 PIRSF PIRSF016548 1 158 2.6E-58 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CI104_RS23710 b93cecb8d2b5e5fd1a9ce59b79920c30 162 Pfam PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ 1 147 8.7E-52 T 28-03-2018 IPR007448 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ GO:0006355 CI104_RS00695 34f08a04e44f55f37e5e7573f17b0884 551 TIGRFAM TIGR00795 lctP: transporter, lactate permease (LctP) family 6 544 2.9E-236 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CI104_RS00695 34f08a04e44f55f37e5e7573f17b0884 551 Pfam PF02652 L-lactate permease 16 542 1.1E-229 T 28-03-2018 IPR003804 L-lactate permease GO:0005887|GO:0015129|GO:0015727 CI104_RS12865 141d78d904f1b3e5165b598042ea248b 299 SUPERFAMILY SSF103481 40 134 1.44E-11 T 28-03-2018 CI104_RS12865 141d78d904f1b3e5165b598042ea248b 299 SUPERFAMILY SSF103481 205 287 9.29E-10 T 28-03-2018 CI104_RS12865 141d78d904f1b3e5165b598042ea248b 299 Pfam PF00892 EamA-like transporter family 7 130 1.7E-14 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS12865 141d78d904f1b3e5165b598042ea248b 299 Pfam PF00892 EamA-like transporter family 143 286 5.9E-15 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS09335 c3cf92bfb3315db3c411eee7846ce498 760 Pfam PF06630 Enterobacterial exodeoxyribonuclease VIII 51 217 7.0E-26 T 28-03-2018 IPR010584 Exodeoxyribonuclease 8 GO:0051908|GO:0090305 CI104_RS09335 c3cf92bfb3315db3c411eee7846ce498 760 Pfam PF16473 3' exoribonuclease, RNase T-like 577 754 5.7E-49 T 28-03-2018 IPR033390 3'-5' exoribonuclease Rv2179c-like domain CI104_RS09335 c3cf92bfb3315db3c411eee7846ce498 760 Gene3D G3DSA:3.30.420.10 571 760 4.1E-15 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS09335 c3cf92bfb3315db3c411eee7846ce498 760 SUPERFAMILY SSF53098 577 757 3.79E-19 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS04305 55d57211a4a62a7c40456e663ad6784e 236 SUPERFAMILY SSF52540 38 220 5.34E-31 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04305 55d57211a4a62a7c40456e663ad6784e 236 Gene3D G3DSA:3.40.50.300 9 50 6.6E-4 T 28-03-2018 CI104_RS04305 55d57211a4a62a7c40456e663ad6784e 236 Gene3D G3DSA:3.40.50.300 51 225 1.1E-30 T 28-03-2018 CI104_RS27980 b7d4b0840f747181aed368c71d27ddac 452 Pfam PF01548 Transposase 21 165 5.3E-19 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS27980 b7d4b0840f747181aed368c71d27ddac 452 Pfam PF02371 Transposase IS116/IS110/IS902 family 297 380 2.7E-12 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CI104_RS04390 15a5bda1ba519d95bf7df41042360e35 247 Pfam PF04402 Protein of unknown function (DUF541) 30 230 3.4E-44 T 28-03-2018 IPR007497 Protein of unknown function DUF541 CI104_RS01370 94f268af1e10135fc4aa8d9dec3e3244 81 ProSitePatterns PS01148 Uncharacterized protein family UPF0033 signature. 12 36 - T 28-03-2018 IPR001455 TusA-like domain CI104_RS01370 94f268af1e10135fc4aa8d9dec3e3244 81 Gene3D G3DSA:3.30.110.40 4 81 9.1E-29 T 28-03-2018 IPR001455 TusA-like domain CI104_RS01370 94f268af1e10135fc4aa8d9dec3e3244 81 Pfam PF01206 Sulfurtransferase TusA 10 79 1.8E-24 T 28-03-2018 IPR001455 TusA-like domain CI104_RS01370 94f268af1e10135fc4aa8d9dec3e3244 81 Hamap MF_00413 Sulfurtransferase TusA [tusA]. 3 81 29.504 T 28-03-2018 IPR022931 Sulfur carrier protein TusA GO:0002143|GO:0097163 CI104_RS01370 94f268af1e10135fc4aa8d9dec3e3244 81 SUPERFAMILY SSF64307 5 80 1.96E-26 T 28-03-2018 IPR001455 TusA-like domain CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 Gene3D G3DSA:3.40.50.300 12 289 8.7E-57 T 28-03-2018 CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 SUPERFAMILY SSF52540 11 243 5.07E-49 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 SMART SM00382 348 522 3.4E-11 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 SMART SM00382 31 236 4.5E-8 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 SUPERFAMILY SSF52540 302 526 8.46E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 TIGRFAM TIGR03719 ABC_ABC_ChvD: ATP-binding cassette protein, ChvD family 2 553 3.9E-295 T 28-03-2018 IPR022374 ABC transporter, ATP-binding protein, ChvD CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 Pfam PF00005 ABC transporter 22 191 1.9E-32 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 Pfam PF00005 ABC transporter 340 473 5.0E-24 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 Gene3D G3DSA:3.40.50.300 290 551 2.7E-56 T 28-03-2018 CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 Pfam PF12848 ABC transporter 230 306 1.7E-11 T 28-03-2018 IPR032781 ABC-transporter extension domain CI104_RS04395 30f61f264cfedb46cc24405fc4f461e7 555 ProSitePatterns PS00211 ABC transporters family signature. 163 177 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS10860 b30b1779ea71b3adb41aa855579834ae 164 Gene3D G3DSA:3.40.50.720 12 148 7.9E-4 T 28-03-2018 CI104_RS21030 a03813610d059ac6276141059f96ff6a 88 SUPERFAMILY SSF109910 1 78 1.44E-27 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase CI104_RS21030 a03813610d059ac6276141059f96ff6a 88 Pfam PF03937 Flavinator of succinate dehydrogenase 6 76 4.9E-26 T 28-03-2018 IPR005631 Flavinator of succinate dehydrogenase CI104_RS21030 a03813610d059ac6276141059f96ff6a 88 Gene3D G3DSA:1.10.150.250 1 85 3.6E-27 T 28-03-2018 CI104_RS12100 d93df459ab902b5c93a399eb6144cd36 370 Pfam PF01594 AI-2E family transporter 15 344 4.5E-60 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CI104_RS19300 53a565086cee3ba578a760f8f41afb8c 308 PIRSF PIRSF015558 12 299 1.5E-53 T 28-03-2018 IPR016634 WYL domain protein, s026 type CI104_RS19300 53a565086cee3ba578a760f8f41afb8c 308 Pfam PF13280 WYL domain 134 216 2.7E-9 T 28-03-2018 IPR026881 WYL domain CI104_RS19250 e102fe675c70b4fc72a03b0c60e3b2da 413 Gene3D G3DSA:1.10.150.130 95 210 4.6E-16 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS19250 e102fe675c70b4fc72a03b0c60e3b2da 413 Pfam PF13356 Arm DNA-binding domain 8 95 1.9E-18 T 28-03-2018 IPR025166 Integrase, DNA-binding domain CI104_RS19250 e102fe675c70b4fc72a03b0c60e3b2da 413 SUPERFAMILY SSF56349 105 387 1.0E-56 T 28-03-2018 IPR011010 DNA breaking-rejoining enzyme, catalytic core GO:0003677 CI104_RS19250 e102fe675c70b4fc72a03b0c60e3b2da 413 Pfam PF00589 Phage integrase family 214 377 4.5E-33 T 28-03-2018 IPR002104 Integrase, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS19250 e102fe675c70b4fc72a03b0c60e3b2da 413 Gene3D G3DSA:1.10.443.10 211 392 1.8E-26 T 28-03-2018 IPR013762 Integrase-like, catalytic domain GO:0003677|GO:0006310|GO:0015074 CI104_RS09165 f42d75faa685d4cd39601dbc4a26d270 255 ProSitePatterns PS00211 ABC transporters family signature. 133 147 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS09165 f42d75faa685d4cd39601dbc4a26d270 255 Gene3D G3DSA:3.40.50.300 10 220 5.2E-57 T 28-03-2018 CI104_RS09165 f42d75faa685d4cd39601dbc4a26d270 255 SUPERFAMILY SSF52540 14 213 1.88E-63 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS09165 f42d75faa685d4cd39601dbc4a26d270 255 Pfam PF00005 ABC transporter 27 160 7.9E-29 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS09165 f42d75faa685d4cd39601dbc4a26d270 255 SMART SM00382 36 210 7.9E-15 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS11905 8e3edc3e01c164f02b09ab1039cbfea7 96 ProDom PD066031 YDIZ CYTOPLASMIC STY1786 1 94 2.0E-38 T 28-03-2018 IPR020499 Uncharacterised protein family YdiZ CI104_RS11905 8e3edc3e01c164f02b09ab1039cbfea7 96 Pfam PF11080 Endoribonuclease GhoS 1 93 1.9E-42 T 28-03-2018 IPR022597 Endoribonuclease GhoS GO:0004521 CI104_RS26295 c70aa6a45b86d93556b79daaaeaa5808 371 Pfam PF03824 High-affinity nickel-transport protein 13 366 8.1E-53 T 28-03-2018 IPR011541 Nickel/cobalt transporter, high-affinity GO:0015099|GO:0016021|GO:0035444|GO:0046872 CI104_RS17550 9deee892f3f29acbc3bd5e33a47a950c 147 Hamap MF_01394 NAD(P)H-quinone oxidoreductase subunit 3, chloroplastic [ndhC]. 9 126 19.908 T 28-03-2018 IPR023043 NAD(P)H-quinone oxidoreductase subunit 3, bacterial/plastid GO:0016651|GO:0055114 CI104_RS17550 9deee892f3f29acbc3bd5e33a47a950c 147 Pfam PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 28 125 2.9E-31 T 28-03-2018 IPR000440 NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS14405 8929892277d51ebc6ad9e66fb5982432 76 Pfam PF06150 ChaB 9 75 8.5E-27 T 28-03-2018 IPR009317 ChaB CI104_RS14405 8929892277d51ebc6ad9e66fb5982432 76 SUPERFAMILY SSF140376 2 75 3.27E-27 T 28-03-2018 CI104_RS27645 25195f873bec8d0e5d10a1e0a3226063 245 TIGRFAM TIGR02755 TraX_Ftype: type-F conjugative transfer system pilin acetylase TraX 22 245 1.7E-69 T 28-03-2018 IPR014125 Type-F conjugative transfer system pilin acetylase TraX CI104_RS27645 25195f873bec8d0e5d10a1e0a3226063 245 Pfam PF05857 TraX protein 29 244 8.6E-41 T 28-03-2018 IPR008875 TraX CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 SUPERFAMILY SSF54999 5 101 1.26E-36 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 Hamap MF_00508 30S ribosomal protein S10 [rpsJ]. 3 102 27.353 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 ProSitePatterns PS00361 Ribosomal protein S10 signature. 29 44 - T 28-03-2018 IPR018268 Ribosomal protein S10, conserved site GO:0003723|GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 TIGRFAM TIGR01049 rpsJ_bact: ribosomal protein uS10 4 101 1.0E-46 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 SMART SM01403 7 101 1.0E-56 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 40 55 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 61 75 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 PRINTS PR00971 Ribosomal protein S10 family signature 5 18 1.2E-18 T 28-03-2018 IPR001848 Ribosomal protein S10 GO:0003735|GO:0005840|GO:0006412 Reactome: R-HSA-156827|Reactome: R-HSA-156902|Reactome: R-HSA-1799339|Reactome: R-HSA-192823|Reactome: R-HSA-2408557|Reactome: R-HSA-6791226|Reactome: R-HSA-72649|Reactome: R-HSA-72689|Reactome: R-HSA-72695|Reactome: R-HSA-72702|Reactome: R-HSA-72706|Reactome: R-HSA-72764|Reactome: R-HSA-975956|Reactome: R-HSA-975957 CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 Pfam PF00338 Ribosomal protein S10p/S20e 7 100 2.1E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CI104_RS02040 45d53e98b9ae88d2567b52bea3a6f87c 103 Gene3D G3DSA:3.30.70.600 3 102 1.4E-35 T 28-03-2018 IPR027486 Ribosomal protein S10 domain CI104_RS24330 a5f0d25bba1e4bbb7d415eac5b91e658 107 Pfam PF05437 Branched-chain amino acid transport protein (AzlD) 8 102 1.1E-11 T 28-03-2018 IPR008407 Branched-chain amino acid transport, AzlD CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 SUPERFAMILY SSF46785 4 108 9.4E-23 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 SUPERFAMILY SSF53850 90 292 5.57E-40 T 28-03-2018 CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 Gene3D G3DSA:3.40.190.10 174 260 9.1E-19 T 28-03-2018 CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 Pfam PF00126 Bacterial regulatory helix-turn-helix protein, lysR family 4 63 1.8E-19 T 28-03-2018 IPR000847 Transcription regulator HTH, LysR GO:0003700|GO:0006355 CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 Gene3D G3DSA:1.10.10.10 3 84 4.9E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 Gene3D G3DSA:3.40.190.10 89 173 4.9E-14 T 28-03-2018 CI104_RS02500 085c892c9aa408d5177f9d454f876faf 310 Pfam PF03466 LysR substrate binding domain 90 291 3.0E-39 T 28-03-2018 IPR005119 LysR, substrate-binding CI104_RS10265 92bbcf221dc7e05fe4781c86497b9d5e 110 Pfam PF10610 Thin aggregative fimbriae synthesis protein 6 103 6.8E-48 T 28-03-2018 IPR014491 Curli production protein CsgC CI104_RS10265 92bbcf221dc7e05fe4781c86497b9d5e 110 PIRSF PIRSF018100 1 110 6.0E-64 T 28-03-2018 IPR014491 Curli production protein CsgC CI104_RS13955 447ba1389edd59cde43ff6ab337007f0 280 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 89 267 2.8E-14 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13955 447ba1389edd59cde43ff6ab337007f0 280 SUPERFAMILY SSF161098 5 280 3.66E-71 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13955 447ba1389edd59cde43ff6ab337007f0 280 Gene3D G3DSA:1.10.3720.10 1 267 7.8E-47 T 28-03-2018 CI104_RS07990 12392ccce5c682888a89cb86b5bbc767 550 Gene3D G3DSA:3.20.130.10 358 535 3.6E-60 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS07990 12392ccce5c682888a89cb86b5bbc767 550 Pfam PF05681 Fumarate hydratase (Fumerase) 50 325 3.4E-79 T 28-03-2018 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain GO:0016829 CI104_RS07990 12392ccce5c682888a89cb86b5bbc767 550 Pfam PF05683 Fumarase C-terminus 331 536 7.5E-82 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS07990 12392ccce5c682888a89cb86b5bbc767 550 SUPERFAMILY SSF117457 361 534 1.57E-55 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS07990 12392ccce5c682888a89cb86b5bbc767 550 PIRSF PIRSF001394 29 550 2.9E-218 T 28-03-2018 IPR011167 Iron-dependent fumarate hydratase GO:0004333|GO:0006091 KEGG: 00020+4.2.1.2|KEGG: 00620+4.2.1.2|KEGG: 00720+4.2.1.2|MetaCyc: PWY-5392|MetaCyc: PWY-561|MetaCyc: PWY-5690|MetaCyc: PWY-5913|MetaCyc: PWY-6728|MetaCyc: PWY-6969|MetaCyc: PWY-7254|MetaCyc: PWY-7384 CI104_RS07990 12392ccce5c682888a89cb86b5bbc767 550 TIGRFAM TIGR00723 ttdB_fumA_fumB: hydrolyase, tartrate beta subunit/fumarate domain protein, Fe-S type 372 535 8.4E-53 T 28-03-2018 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain GO:0016836 CI104_RS15350 7ba5c785f5f7d716dbaeb7a2ede8e86e 251 SUPERFAMILY SSF52540 3 214 3.41E-55 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS15350 7ba5c785f5f7d716dbaeb7a2ede8e86e 251 SMART SM00382 29 199 4.5E-12 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS15350 7ba5c785f5f7d716dbaeb7a2ede8e86e 251 Gene3D G3DSA:3.40.50.300 1 239 1.9E-56 T 28-03-2018 CI104_RS15350 7ba5c785f5f7d716dbaeb7a2ede8e86e 251 Pfam PF00005 ABC transporter 20 149 7.1E-28 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS18645 e209570d98010f46473a1e0d4cc264ca 209 Pfam PF06226 Protein of unknown function (DUF1007) 6 208 1.4E-63 T 28-03-2018 IPR010412 Protein of unknown function DUF1007 CI104_RS18645 e209570d98010f46473a1e0d4cc264ca 209 PIRSF PIRSF008159 1 209 1.0E-69 T 28-03-2018 IPR016537 Uncharacterised conserved protein UCP008159, CI104_RS10305 7b5755b52546ccbb67d54de3c0f6f045 75 Pfam PF07119 Protein of unknown function (DUF1375) 48 68 2.5E-5 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 CI104_RS10305 7b5755b52546ccbb67d54de3c0f6f045 75 Pfam PF07119 Protein of unknown function (DUF1375) 9 42 3.4E-4 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 CI104_RS16870 de49578bcdadf3a721ff6a2ec39bec59 332 Gene3D G3DSA:3.40.50.2300 20 116 1.2E-13 T 28-03-2018 CI104_RS16870 de49578bcdadf3a721ff6a2ec39bec59 332 Gene3D G3DSA:3.40.50.2300 122 332 2.8E-41 T 28-03-2018 CI104_RS16870 de49578bcdadf3a721ff6a2ec39bec59 332 Pfam PF13407 Periplasmic binding protein domain 28 299 4.5E-63 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS16870 de49578bcdadf3a721ff6a2ec39bec59 332 SUPERFAMILY SSF53822 25 331 3.93E-83 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS24285 3f6e879b9b03b91c70e747163ee6b275 328 Gene3D G3DSA:3.40.50.2300 142 297 2.6E-18 T 28-03-2018 CI104_RS24285 3f6e879b9b03b91c70e747163ee6b275 328 SUPERFAMILY SSF53822 23 324 3.14E-68 T 28-03-2018 IPR028082 Periplasmic binding protein-like I CI104_RS24285 3f6e879b9b03b91c70e747163ee6b275 328 Gene3D G3DSA:3.40.50.2300 22 141 8.5E-20 T 28-03-2018 CI104_RS24285 3f6e879b9b03b91c70e747163ee6b275 328 Pfam PF13407 Periplasmic binding protein domain 26 285 3.6E-60 T 28-03-2018 IPR025997 Periplasmic binding protein CI104_RS24285 3f6e879b9b03b91c70e747163ee6b275 328 TIGRFAM TIGR02637 RhaS: rhamnose ABC transporter, rhamnose-binding protein 26 326 1.4E-135 T 28-03-2018 IPR013459 Rhamnose ABC transporter, substrate-binding protein RhaS GO:0015762 CI104_RS10355 f3b8597e7009ba3a54c36db54ab3aa64 84 ProDom PD060858 YCEP CYTOPLASMIC STY1199 ESCHERICHIA COLI SIMILAR ECS1438 1 84 1.0E-43 T 28-03-2018 IPR025730 Biofilm regulator BssS CI104_RS10355 f3b8597e7009ba3a54c36db54ab3aa64 84 Pfam PF13991 BssS protein family 11 81 5.8E-32 T 28-03-2018 IPR025730 Biofilm regulator BssS CI104_RS03260 74d3e669b37c1786323c50abc719585d 495 Pfam PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus 108 494 1.3E-154 T 28-03-2018 IPR007392 D-galactarate/Altronate dehydratase, C-terminal GO:0016829 CI104_RS03260 74d3e669b37c1786323c50abc719585d 495 Pfam PF08666 SAF domain 10 81 2.8E-16 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS03260 74d3e669b37c1786323c50abc719585d 495 SMART SM00858 10 81 2.4E-20 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS22365 fa7761d2abb15d1b9ee21612e5c5be33 126 Pfam PF01638 HxlR-like helix-turn-helix 29 116 2.6E-32 T 28-03-2018 IPR002577 Helix-turn-helix, HxlR type CI104_RS22365 fa7761d2abb15d1b9ee21612e5c5be33 126 SUPERFAMILY SSF46785 14 120 4.77E-33 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS22365 fa7761d2abb15d1b9ee21612e5c5be33 126 Gene3D G3DSA:1.10.10.10 1 126 3.3E-24 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS21990 fe12df8e43e042153f8346fcf451a6ed 147 SUPERFAMILY SSF102400 1 145 5.23E-46 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CI104_RS21990 fe12df8e43e042153f8346fcf451a6ed 147 Pfam PF04364 DNA polymerase III chi subunit, HolC 1 141 1.9E-38 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CI104_RS21990 fe12df8e43e042153f8346fcf451a6ed 147 Gene3D G3DSA:3.40.50.10110 1 147 1.5E-51 T 28-03-2018 IPR007459 DNA polymerase III chi subunit, HolC GO:0003677|GO:0003887|GO:0006260 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 Gene3D G3DSA:3.20.20.140 77 340 3.3E-116 T 28-03-2018 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 PIRSF PIRSF001238 8 388 2.2E-154 T 28-03-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 Gene3D G3DSA:2.30.40.10 9 76 4.8E-15 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 SUPERFAMILY SSF51556 63 346 1.15E-70 T 28-03-2018 IPR032466 Metal-dependent hydrolase CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 SUPERFAMILY SSF51338 8 62 4.32E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 SUPERFAMILY SSF51338 346 387 4.32E-24 T 28-03-2018 IPR011059 Metal-dependent hydrolase, composite domain GO:0016810 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 TIGRFAM TIGR01975 isoAsp_dipep: beta-aspartyl peptidase 9 388 4.2E-170 T 28-03-2018 IPR010229 Peptidase M38, beta-aspartyl dipeptidase GO:0008798 CI104_RS20740 7c6655cd5dbff825bfff1cd780f424a9 388 Pfam PF01979 Amidohydrolase family 267 373 7.5E-8 T 28-03-2018 IPR006680 Amidohydrolase-related GO:0016787 CI104_RS09670 b51c4436658a8a49fb703cc832e33c16 516 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 51 512 8.6E-204 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CI104_RS09670 b51c4436658a8a49fb703cc832e33c16 516 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 92 512 1.0E-168 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CI104_RS12710 8d264eeccf0ba80c135b24793a13e3f4 285 Pfam PF04976 DMSO reductase anchor subunit (DmsC) 1 275 3.3E-103 T 28-03-2018 IPR007059 DMSO reductase anchor subunit (DmsC) GO:0016021|GO:0019645 CI104_RS12710 8d264eeccf0ba80c135b24793a13e3f4 285 Gene3D G3DSA:1.20.1630.10 3 283 1.8E-39 T 28-03-2018 CI104_RS14955 97412815472a46e227c585a1f11cfef0 78 SUPERFAMILY SSF47413 3 71 1.01E-27 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS14955 97412815472a46e227c585a1f11cfef0 78 Gene3D G3DSA:1.10.260.40 1 73 1.0E-17 T 28-03-2018 CI104_RS14955 97412815472a46e227c585a1f11cfef0 78 Pfam PF13693 Winged helix-turn-helix DNA-binding 7 72 1.2E-31 T 28-03-2018 CI104_RS05215 cc45056d37214e95bc1a871c88bcb3bf 660 SUPERFAMILY SSF81345 347 657 2.88E-72 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS05215 cc45056d37214e95bc1a871c88bcb3bf 660 SUPERFAMILY SSF81345 8 325 4.45E-59 T 28-03-2018 IPR029022 ABC transporter, BtuC-like CI104_RS05215 cc45056d37214e95bc1a871c88bcb3bf 660 Pfam PF01032 FecCD transport family 25 323 1.2E-63 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS05215 cc45056d37214e95bc1a871c88bcb3bf 660 Pfam PF01032 FecCD transport family 364 657 5.9E-75 T 28-03-2018 IPR000522 ABC transporter, FecCD-like GO:0005215|GO:0016020 CI104_RS05215 cc45056d37214e95bc1a871c88bcb3bf 660 Gene3D G3DSA:1.10.3470.10 1 332 2.5E-48 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS05215 cc45056d37214e95bc1a871c88bcb3bf 660 Gene3D G3DSA:1.10.3470.10 342 660 4.1E-46 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 TIGRFAM TIGR01096 3A0103s03R: lysine-arginine-ornithine-binding periplasmic protein 3 253 1.1E-100 T 28-03-2018 IPR005768 Specific amino acids and opine-binding periplasmic protein, ABC transporter GO:0006810|GO:0030288 CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 SMART SM00062 27 256 6.4E-77 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 Gene3D G3DSA:3.40.190.10 16 140 3.2E-35 T 28-03-2018 CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 Gene3D G3DSA:3.40.190.10 141 258 1.3E-15 T 28-03-2018 CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 SUPERFAMILY SSF53850 1 256 2.51E-65 T 28-03-2018 CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 Pfam PF00497 Bacterial extracellular solute-binding proteins, family 3 28 254 2.8E-61 T 28-03-2018 IPR001638 Solute-binding protein family 3/N-terminal domain of MltF CI104_RS17690 0e1e2070f0eb3d3e7308630dc43c4fca 260 ProSitePatterns PS01039 Bacterial extracellular solute-binding proteins, family 3 signature. 50 63 - T 28-03-2018 IPR018313 Solute-binding protein family 3, conserved site GO:0005215|GO:0006810 CI104_RS14645 2b8f2dc52d5e2616d0be0cae476ad904 514 Pfam PF06450 Bacterial Na+/H+ antiporter B (NhaB) 1 511 3.9E-299 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CI104_RS14645 2b8f2dc52d5e2616d0be0cae476ad904 514 TIGRFAM TIGR00774 NhaB: Na+/H+ antiporter NhaB 1 512 7.3E-302 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CI104_RS14645 2b8f2dc52d5e2616d0be0cae476ad904 514 Hamap MF_01599 Na(+)/H(+) antiporter NhaB [nhaB]. 1 514 368.63 T 28-03-2018 IPR004671 Na+/H+ antiporter NhaB GO:0006814|GO:0015385|GO:0016021 CI104_RS08925 af0802f48f0b4a1e2a9f491f012a2350 203 SUPERFAMILY SSF89392 22 202 1.1E-56 T 28-03-2018 IPR029046 Lipoprotein localisation LolA/LolB/LppX CI104_RS08925 af0802f48f0b4a1e2a9f491f012a2350 203 Gene3D G3DSA:2.50.20.10 19 202 3.8E-40 T 28-03-2018 CI104_RS08925 af0802f48f0b4a1e2a9f491f012a2350 203 Pfam PF03548 Outer membrane lipoprotein carrier protein LolA 33 191 7.6E-58 T 28-03-2018 IPR004564 Outer membrane lipoprotein carrier protein LolA-like CI104_RS08925 af0802f48f0b4a1e2a9f491f012a2350 203 Hamap MF_00240 Outer-membrane lipoprotein carrier protein [lolA]. 9 201 32.538 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CI104_RS08925 af0802f48f0b4a1e2a9f491f012a2350 203 TIGRFAM TIGR00547 lolA: outer membrane lipoprotein carrier protein LolA 1 203 4.3E-121 T 28-03-2018 IPR018323 Outer membrane lipoprotein carrier protein LolA, Proteobacteria GO:0042597|GO:0042953|GO:0042954 CI104_RS17845 a3645d0e33b76ec8a363e5d6398bc7cc 446 Gene3D G3DSA:2.40.160.60 26 446 1.7E-87 T 28-03-2018 CI104_RS17845 a3645d0e33b76ec8a363e5d6398bc7cc 446 SUPERFAMILY SSF56935 26 446 9.61E-117 T 28-03-2018 CI104_RS17845 a3645d0e33b76ec8a363e5d6398bc7cc 446 Pfam PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) 17 446 6.8E-154 T 28-03-2018 IPR005017 Outer membrane protein transport protein (OMPP1/FadL/TodX) CI104_RS00230 6b35f0391dda87183d5a20a4cd9074ed 107 SUPERFAMILY SSF47413 52 106 5.9E-11 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS00230 6b35f0391dda87183d5a20a4cd9074ed 107 Pfam PF01381 Helix-turn-helix 52 96 2.5E-7 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS00230 6b35f0391dda87183d5a20a4cd9074ed 107 Gene3D G3DSA:1.10.3100.10 45 101 6.0E-10 T 28-03-2018 IPR027910 YdiL-like domain CI104_RS18375 ba00b81df597cc1454cd825f72fcfb58 232 Gene3D G3DSA:3.40.50.1820 5 215 1.3E-20 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS18375 ba00b81df597cc1454cd825f72fcfb58 232 Pfam PF02230 Phospholipase/Carboxylesterase 4 208 4.9E-52 T 28-03-2018 IPR003140 Phospholipase/carboxylesterase/thioesterase GO:0016787 CI104_RS18375 ba00b81df597cc1454cd825f72fcfb58 232 SUPERFAMILY SSF53474 5 206 9.13E-31 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS08865 cf5ff4c3cf813d1c2e913753a1adf711 219 SUPERFAMILY SSF56037 56 212 1.65E-29 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS08865 cf5ff4c3cf813d1c2e913753a1adf711 219 SMART SM00873 59 213 1.9E-7 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS08865 cf5ff4c3cf813d1c2e913753a1adf711 219 Pfam PF03483 B3/4 domain 60 192 3.5E-21 T 28-03-2018 IPR005146 B3/B4 tRNA-binding domain GO:0003723|GO:0004826 KEGG: 00970+6.1.1.20 CI104_RS08865 cf5ff4c3cf813d1c2e913753a1adf711 219 Gene3D G3DSA:3.50.40.10 57 211 1.5E-24 T 28-03-2018 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CI104_RS06195 d9535a337947439936607e9e78c64e0a 463 Pfam PF03611 PTS system sugar-specific permease component 10 404 4.6E-126 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CI104_RS12960 f74aed8b295a698c3d583c9790bf1cec 160 Gene3D G3DSA:3.40.630.30 28 156 1.7E-15 T 28-03-2018 CI104_RS12960 f74aed8b295a698c3d583c9790bf1cec 160 Pfam PF00583 Acetyltransferase (GNAT) family 44 144 2.2E-8 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS12960 f74aed8b295a698c3d583c9790bf1cec 160 SUPERFAMILY SSF55729 39 155 2.52E-12 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS24515 ca072de89e4144ac7e57527f67fb92a0 230 Pfam PF06178 Oligogalacturonate-specific porin protein (KdgM) 14 230 1.3E-87 T 28-03-2018 IPR009331 Oligogalacturonate-specific porin CI104_RS24515 ca072de89e4144ac7e57527f67fb92a0 230 Gene3D G3DSA:2.40.160.40 23 230 1.2E-17 T 28-03-2018 CI104_RS24515 ca072de89e4144ac7e57527f67fb92a0 230 SUPERFAMILY SSF56935 21 230 8.97E-5 T 28-03-2018 CI104_RS19845 736013a10b8ce13596064261326bc8d0 290 Pfam PF02492 CobW/HypB/UreG, nucleotide-binding domain 106 267 7.8E-35 T 28-03-2018 IPR003495 CobW/HypB/UreG, nucleotide-binding domain CI104_RS19845 736013a10b8ce13596064261326bc8d0 290 SUPERFAMILY SSF52540 88 286 5.29E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS19845 736013a10b8ce13596064261326bc8d0 290 Gene3D G3DSA:3.40.50.300 104 261 8.6E-22 T 28-03-2018 CI104_RS19845 736013a10b8ce13596064261326bc8d0 290 PIRSF PIRSF005624 70 290 1.1E-93 T 28-03-2018 IPR012202 [NiFe]-hydrogenase/urease maturation factor, Ni2-binding GTPase GO:0003924|GO:0016151 CI104_RS19845 736013a10b8ce13596064261326bc8d0 290 TIGRFAM TIGR00073 hypB: hydrogenase accessory protein HypB 76 289 5.3E-98 T 28-03-2018 IPR004392 Hydrogenase accessory protein HypB GO:0006461|GO:0016151 CI104_RS02375 a47acb14671a81801868aa5850f316c1 80 Pfam PF06196 Protein of unknown function (DUF997) 7 77 1.8E-30 T 28-03-2018 IPR010398 Protein of unknown function DUF997 CI104_RS02375 a47acb14671a81801868aa5850f316c1 80 Gene3D G3DSA:1.20.1110.10 2 77 3.8E-4 T 28-03-2018 CI104_RS02375 a47acb14671a81801868aa5850f316c1 80 ProDom PD745092 MEMBRANE YHDT SODIUM/PANTOTHENATE TRANSMEMBRANE INNER SYMPORTER Y0210 INTEGRAL PROTEIN-LIKE PM1090 1 80 1.0E-22 T 28-03-2018 IPR010398 Protein of unknown function DUF997 CI104_RS18295 bebb57bf04c3a1e4ff24908833c423cb 230 Pfam PF06249 Ethanolamine utilisation protein EutQ 82 229 5.0E-65 T 28-03-2018 IPR010424 Ethanolamine utilisation EutQ CI104_RS18295 bebb57bf04c3a1e4ff24908833c423cb 230 Gene3D G3DSA:2.60.120.10 87 230 7.5E-32 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS18295 bebb57bf04c3a1e4ff24908833c423cb 230 SUPERFAMILY SSF51182 106 227 2.08E-28 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS08530 0f1a1ff9a99e14efd8ad86e00d9ddcdc 382 Gene3D G3DSA:3.40.50.2000 188 340 2.6E-15 T 28-03-2018 CI104_RS08530 0f1a1ff9a99e14efd8ad86e00d9ddcdc 382 SUPERFAMILY SSF53756 8 369 6.28E-31 T 28-03-2018 CI104_RS08530 0f1a1ff9a99e14efd8ad86e00d9ddcdc 382 Pfam PF13692 Glycosyl transferases group 1 202 330 4.2E-10 T 28-03-2018 CI104_RS17510 c9f7b4fb906e74e52064506746767977 184 Pfam PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 17 157 3.5E-33 T 28-03-2018 IPR001457 NADH:ubiquinone/plastoquinone oxidoreductase, chain 6 GO:0008137|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS14055 eb31f44b77566ba0ec9da3761a321165 72 ProDom PD052686 LIPOPROTEIN INDUCIBLE OSMOTICALLY B PRECURSOR SIGNAL MEMBRANE PALMITATE TRANSMEMBRANE SURFACE 12 50 1.0E-6 T 28-03-2018 CI104_RS14055 eb31f44b77566ba0ec9da3761a321165 72 Pfam PF05433 Glycine zipper 2TM domain 34 71 1.7E-7 T 28-03-2018 IPR008816 Glycine zipper 2TM domain GO:0019867 CI104_RS23675 b18a3aca79d891596ef0877a61f67761 144 Pfam PF13801 Heavy-metal resistance 9 122 4.8E-24 T 28-03-2018 IPR025961 Heavy-metal resistance protein CI104_RS23675 b18a3aca79d891596ef0877a61f67761 144 ProDom PD097062 ZINC RESISTANCE-ASSOCIATED PERIPLASMIC PRECURSOR SIGNAL YJAI SEQUENCING DIRECT DFFA 1 119 3.0E-34 T 28-03-2018 IPR020365 Zinc resistance-associated protein, ZraP GO:0008270|GO:0042597 CI104_RS05745 37ab379131f64b4a69f58d68dc5aea7a 287 SUPERFAMILY SSF103088 127 243 1.96E-19 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS05745 37ab379131f64b4a69f58d68dc5aea7a 287 Gene3D G3DSA:3.30.1330.60 57 276 3.6E-28 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS05745 37ab379131f64b4a69f58d68dc5aea7a 287 Pfam PF00691 OmpA family 141 233 6.7E-15 T 28-03-2018 IPR006665 OmpA-like domain CI104_RS06740 3abe5a2cfd56e91cc7dd065d5eed32f5 111 Pfam PF10761 Protein of unknown function (DUF2590) 8 106 7.6E-43 T 28-03-2018 IPR019697 Bacteriophage HP1, Orf28 CI104_RS00995 93104baaae4d314d61f3cc850ec2cb6b 339 SUPERFAMILY SSF161098 89 160 1.96E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS00995 93104baaae4d314d61f3cc850ec2cb6b 339 SUPERFAMILY SSF161098 200 322 1.96E-21 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS00995 93104baaae4d314d61f3cc850ec2cb6b 339 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 114 336 1.3E-45 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS00995 93104baaae4d314d61f3cc850ec2cb6b 339 Gene3D G3DSA:1.10.3720.10 3 325 9.0E-47 T 28-03-2018 CI104_RS09290 7770b71b4ae19072e0c4a5f460bd2961 137 SUPERFAMILY SSF51735 4 135 4.38E-44 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS09290 7770b71b4ae19072e0c4a5f460bd2961 137 Pfam PF13380 CoA binding domain 14 130 4.8E-39 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS09290 7770b71b4ae19072e0c4a5f460bd2961 137 SMART SM00881 9 104 1.5E-26 T 28-03-2018 IPR003781 CoA-binding GO:0048037 CI104_RS09290 7770b71b4ae19072e0c4a5f460bd2961 137 Gene3D G3DSA:3.40.50.720 10 134 3.3E-33 T 28-03-2018 CI104_RS22880 a54e0d6e4197313ac963bb9c6ddf9a2e 219 SUPERFAMILY SSF46894 145 213 5.78E-6 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS22880 a54e0d6e4197313ac963bb9c6ddf9a2e 219 Pfam PF00196 Bacterial regulatory proteins, luxR family 164 211 4.5E-5 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS03335 c46ac0e996f64b895833e9eaf76a5a5e 288 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 67 278 4.4E-10 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS03335 c46ac0e996f64b895833e9eaf76a5a5e 288 SUPERFAMILY SSF161098 50 275 1.01E-42 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS03335 c46ac0e996f64b895833e9eaf76a5a5e 288 Gene3D G3DSA:1.10.3720.10 55 286 5.9E-29 T 28-03-2018 CI104_RS21380 7b0cc26682c22590ea83f755b6581fa5 67 Pfam PF04328 Selenoprotein, putative 5 67 4.9E-28 T 28-03-2018 IPR007423 Selenoprotein, putative CI104_RS10415 bf9fb4bbd36b47c63904fc63c8d63c92 218 TIGRFAM TIGR03170 flgA_cterm: flagella basal body P-ring formation protein FlgA 83 216 2.3E-38 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CI104_RS10415 bf9fb4bbd36b47c63904fc63c8d63c92 218 SMART SM00858 94 156 6.4E-9 T 28-03-2018 IPR013974 SAF domain Reactome: R-HSA-4085001 CI104_RS10415 bf9fb4bbd36b47c63904fc63c8d63c92 218 Pfam PF13144 Chaperone for flagella basal body P-ring formation 44 214 1.4E-36 T 28-03-2018 IPR017585 Flagella basal body P-ring formation protein FlgA, C-terminal CI104_RS10415 bf9fb4bbd36b47c63904fc63c8d63c92 218 Gene3D G3DSA:3.90.1210.10 92 157 2.8E-9 T 28-03-2018 CI104_RS02740 746479a32d333a3b11fa55d8b17a16d5 185 TIGRFAM TIGR04430 OM_asym_MlaD: outer membrane lipid asymmetry maintenance protein MlaD 3 153 7.7E-56 T 28-03-2018 IPR030970 Probable phospholipid ABC transporter-binding protein MlaD GO:0015914 CI104_RS02740 746479a32d333a3b11fa55d8b17a16d5 185 Pfam PF02470 MlaD protein 39 116 5.4E-23 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS01770 1cd5f135a50ca7aaa7c5c5eb436bbbc4 179 Pfam PF05137 Fimbrial assembly protein (PilN) 98 169 1.0E-8 T 28-03-2018 IPR007813 Fimbrial assembly PilN CI104_RS15430 7ce72c44f95a5bb52bb0ce41b6827bc9 379 SUPERFAMILY SSF48208 33 376 2.49E-91 T 28-03-2018 IPR008928 Six-hairpin glycosidase-like GO:0003824 CI104_RS15430 7ce72c44f95a5bb52bb0ce41b6827bc9 379 Pfam PF07470 Glycosyl Hydrolase Family 88 38 377 2.8E-109 T 28-03-2018 IPR010905 Glycosyl hydrolase, family 88 CI104_RS15430 7ce72c44f95a5bb52bb0ce41b6827bc9 379 Gene3D G3DSA:1.50.10.10 1 379 1.9E-80 T 28-03-2018 CI104_RS11525 18dc954bb4954e5997848ff9df45410e 57 Pfam PF08178 GnsA/GnsB toxin of bacterial toxin-antitoxin system 1 54 4.3E-32 T 28-03-2018 IPR012563 Gns CI104_RS03210 cf892324392acaf52b16c284094833b7 161 Pfam PF07681 DoxX 40 118 1.3E-17 T 28-03-2018 IPR032808 DoxX family CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 ProSitePatterns PS00094 C-5 cytosine-specific DNA methylases active site. 174 186 - T 28-03-2018 IPR018117 DNA methylase, C-5 cytosine-specific, active site KEGG: 00270+2.1.1.37|Reactome: R-HSA-212300|Reactome: R-HSA-5334118 CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 SUPERFAMILY SSF53335 92 456 7.15E-79 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 222 236 2.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 93 109 2.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 PRINTS PR00105 Cytosine-specific DNA methyltransferase signature 276 289 2.4E-15 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 Gene3D G3DSA:3.40.50.150 84 316 6.8E-59 T 28-03-2018 CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 Gene3D G3DSA:3.90.120.10 317 443 4.3E-24 T 28-03-2018 CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 Pfam PF00145 C-5 cytosine-specific DNA methylase 92 453 1.5E-74 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS15955 959899b03aae54628db1a7c84155fb10 477 TIGRFAM TIGR00675 dcm: DNA (cytosine-5-)-methyltransferase 94 453 3.6E-102 T 28-03-2018 IPR001525 C-5 cytosine methyltransferase GO:0008168 KEGG: 00270+2.1.1.37 CI104_RS27750 1adbb4e80f88552c53821771fcb56ce6 61 Gene3D G3DSA:3.40.50.300 3 33 1.5E-4 T 28-03-2018 CI104_RS21830 173646d8e0a665723546e98dd2701e5b 187 Pfam PF11188 Protein of unknown function (DUF2975) 73 185 8.9E-15 T 28-03-2018 IPR021354 Protein of unknown function DUF2975 CI104_RS15420 8792815ec219f6883b37f204c990f174 189 SUPERFAMILY SSF54593 2 186 4.95E-67 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS15420 8792815ec219f6883b37f204c990f174 189 Gene3D G3DSA:3.10.180.10 7 186 4.6E-76 T 28-03-2018 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CI104_RS15420 8792815ec219f6883b37f204c990f174 189 Pfam PF06185 YecM protein 10 185 1.5E-68 T 28-03-2018 IPR010393 Protein of unknown function DUF991 CI104_RS01220 49916d8799292b9f93a5b92632d51124 119 Gene3D G3DSA:1.10.1220.10 60 119 9.5E-19 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS01220 49916d8799292b9f93a5b92632d51124 119 Pfam PF05534 HicB family 60 112 6.3E-17 T 28-03-2018 IPR008651 Uncharacterised protein family HicB CI104_RS01220 49916d8799292b9f93a5b92632d51124 119 SUPERFAMILY SSF47598 76 118 2.98E-8 T 28-03-2018 IPR010985 Ribbon-helix-helix GO:0006355 CI104_RS16285 91fffd9a0da94b808d2b7d4f5c297989 288 PIRSF PIRSF033887 1 275 2.1E-70 T 28-03-2018 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related KEGG: 00040+2.7.1.17|KEGG: 00860+2.7.1.177|MetaCyc: PWY-5443 CI104_RS16285 91fffd9a0da94b808d2b7d4f5c297989 288 Pfam PF00288 GHMP kinases N terminal domain 72 120 3.2E-9 T 28-03-2018 IPR006204 GHMP kinase N-terminal domain GO:0005524 CI104_RS16285 91fffd9a0da94b808d2b7d4f5c297989 288 SUPERFAMILY SSF54211 3 148 8.35E-22 T 28-03-2018 IPR020568 Ribosomal protein S5 domain 2-type fold CI104_RS16285 91fffd9a0da94b808d2b7d4f5c297989 288 Gene3D G3DSA:3.30.230.10 21 143 1.8E-15 T 28-03-2018 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CI104_RS20120 0b25298a6d68467485e9b953ae69570a 429 TIGRFAM TIGR00814 stp: serine transporter 18 418 1.2E-184 T 28-03-2018 IPR004694 Hydroxy amino acid transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS13395 3f629dc2192367d97ab99fc5a835c4de 268 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 80 247 2.3E-12 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS13395 3f629dc2192367d97ab99fc5a835c4de 268 Gene3D G3DSA:1.10.3720.10 7 264 1.8E-36 T 28-03-2018 CI104_RS13395 3f629dc2192367d97ab99fc5a835c4de 268 SUPERFAMILY SSF161098 6 257 3.92E-49 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS11190 851d407c0010bbbb3355fea17ff900dd 273 Pfam PF11185 Protein of unknown function (DUF2971) 98 196 4.4E-10 T 28-03-2018 IPR021352 Protein of unknown function DUF2971 CI104_RS06455 f055d9e929a291450e974cd40a7797e2 231 Pfam PF06508 Queuosine biosynthesis protein QueC 3 213 2.4E-83 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CI104_RS06455 f055d9e929a291450e974cd40a7797e2 231 SUPERFAMILY SSF52402 1 213 2.16E-68 T 28-03-2018 CI104_RS06455 f055d9e929a291450e974cd40a7797e2 231 TIGRFAM TIGR00364 TIGR00364: queuosine biosynthesis protein QueC 4 206 1.2E-85 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CI104_RS06455 f055d9e929a291450e974cd40a7797e2 231 Hamap MF_01633 7-cyano-7-deazaguanine synthase [queC]. 2 219 51.881 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CI104_RS06455 f055d9e929a291450e974cd40a7797e2 231 PIRSF PIRSF006293 1 226 3.7E-86 T 28-03-2018 IPR018317 Queuosine biosynthesis protein QueC KEGG: 00790+6.3.4.20|MetaCyc: PWY-6703 CI104_RS06455 f055d9e929a291450e974cd40a7797e2 231 Gene3D G3DSA:3.40.50.620 1 231 1.3E-53 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS16735 12e4300d092e72783151174a2ffea32e 35 Hamap MF_01362 UPF0387 membrane protein YohO [yohO]. 1 35 15.687 T 28-03-2018 IPR020870 Uncharacterised protein family UPF0387, membrane GO:0005886 CI104_RS01320 5878a2c4cd96938e1ecb9c0775cf4514 83 Hamap MF_01217 Acyl carrier protein [acpP]. 6 80 14.107 T 28-03-2018 IPR003231 Acyl carrier protein (ACP) GO:0006633 Reactome: R-HSA-389661|Reactome: R-HSA-611105|Reactome: R-HSA-6799198|Reactome: R-HSA-77289 CI104_RS01320 5878a2c4cd96938e1ecb9c0775cf4514 83 Pfam PF00550 Phosphopantetheine attachment site 10 76 2.2E-13 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS01320 5878a2c4cd96938e1ecb9c0775cf4514 83 Gene3D G3DSA:1.10.1200.10 5 82 2.1E-18 T 28-03-2018 CI104_RS01320 5878a2c4cd96938e1ecb9c0775cf4514 83 SUPERFAMILY SSF47336 3 81 9.81E-19 T 28-03-2018 IPR009081 Phosphopantetheine binding ACP domain CI104_RS13470 792c1ffbcf503a33547124c1f7e8d571 222 Pfam PF11769 Protein of unknown function (DUF3313) 17 213 8.7E-58 T 28-03-2018 IPR021747 Protein of unknown function DUF3313 CI104_RS13350 6a11fcd3841ca03b6e52ab21f0e5e7b6 77 Pfam PF10735 Protein of unknown function (DUF2526) 1 77 7.8E-43 T 28-03-2018 IPR019671 Protein of unknown function DUF2526 CI104_RS03535 f11df5775e3c31645767d04038664d10 171 Gene3D G3DSA:1.10.530.40 1 170 1.1E-48 T 28-03-2018 IPR023347 Lysozyme domain GO:0003796 CI104_RS03535 f11df5775e3c31645767d04038664d10 171 Pfam PF00959 Phage lysozyme 54 160 2.6E-18 T 28-03-2018 IPR002196 Glycoside hydrolase, family 24 GO:0003796|GO:0009253|GO:0016998 CI104_RS03535 f11df5775e3c31645767d04038664d10 171 SUPERFAMILY SSF53955 10 168 2.25E-54 T 28-03-2018 IPR023346 Lysozyme-like domain CI104_RS19140 918d2fc43f5ed19e5d58a99834551b14 137 Pfam PF12120 Rifampin ADP-ribosyl transferase 12 110 3.6E-46 T 28-03-2018 IPR021975 DNA/RNA tunnel of bacterial DNA dependent RNA polymerase CI104_RS10110 bd10cd1d6b1ca9a3a19a48ea5c23fc26 427 Pfam PF12704 MacB-like periplasmic core domain 19 220 5.1E-9 T 28-03-2018 IPR025857 MacB-like periplasmic core domain CI104_RS10110 bd10cd1d6b1ca9a3a19a48ea5c23fc26 427 Pfam PF02687 FtsX-like permease family 332 419 6.9E-13 T 28-03-2018 IPR003838 ABC transporter permease protein domain GO:0016020 CI104_RS13195 43da486b0e081499bb571c0d352d4a4a 308 ProSitePatterns PS00083 Intradiol ring-cleavage dioxygenases signature. 135 163 - T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CI104_RS13195 43da486b0e081499bb571c0d352d4a4a 308 SUPERFAMILY SSF49482 7 289 4.45E-93 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CI104_RS13195 43da486b0e081499bb571c0d352d4a4a 308 Gene3D G3DSA:2.60.130.10 2 308 1.3E-71 T 28-03-2018 IPR015889 Intradiol ring-cleavage dioxygenase, core GO:0005506|GO:0016702|GO:0055114 CI104_RS13195 43da486b0e081499bb571c0d352d4a4a 308 TIGRFAM TIGR02439 catechol_proteo: catechol 1,2-dioxygenase 8 289 2.0E-134 T 28-03-2018 IPR012801 Catechol 1,2-dioxygenase, proteobacteria GO:0005506|GO:0018576|GO:0019614|GO:0055114 KEGG: 00361+1.13.11.1|KEGG: 00362+1.13.11.1|KEGG: 00364+1.13.11.1|KEGG: 00623+1.13.11.1 CI104_RS13195 43da486b0e081499bb571c0d352d4a4a 308 Pfam PF00775 Dioxygenase 105 289 2.5E-65 T 28-03-2018 IPR000627 Intradiol ring-cleavage dioxygenase, C-terminal GO:0003824|GO:0006725|GO:0008199|GO:0055114 CI104_RS13195 43da486b0e081499bb571c0d352d4a4a 308 Pfam PF04444 Catechol dioxygenase N terminus 27 93 1.3E-21 T 28-03-2018 IPR007535 Catechol dioxygenase, N-terminal GO:0005506|GO:0009712|GO:0018576|GO:0055114 CI104_RS22725 938cc79cedd99aefc7d927c23e1185ba 191 Gene3D G3DSA:1.10.10.60 2 55 2.5E-7 T 28-03-2018 CI104_RS22725 938cc79cedd99aefc7d927c23e1185ba 191 SUPERFAMILY SSF46689 3 60 1.49E-7 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS22725 938cc79cedd99aefc7d927c23e1185ba 191 Gene3D G3DSA:1.10.357.10 56 180 3.8E-15 T 28-03-2018 CI104_RS22725 938cc79cedd99aefc7d927c23e1185ba 191 SUPERFAMILY SSF48498 75 179 4.13E-6 T 28-03-2018 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CI104_RS02150 1d39cb39316a9c2998ec292730c96ef2 38 TIGRFAM TIGR01022 rpmJ_bact: ribosomal protein bL36 1 38 5.9E-22 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02150 1d39cb39316a9c2998ec292730c96ef2 38 ProDom PD002101 RIBOSOMAL L36 RIBONUCLEOPROTEIN 50S CHLOROPLAST PLASTID B SUBUNIT DIRECT SEQUENCING 9 38 3.0E-10 T 28-03-2018 CI104_RS02150 1d39cb39316a9c2998ec292730c96ef2 38 Pfam PF00444 Ribosomal protein L36 1 38 2.3E-20 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02150 1d39cb39316a9c2998ec292730c96ef2 38 Hamap MF_00251 50S ribosomal protein L36 [rpmJ]. 1 38 17.829 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02150 1d39cb39316a9c2998ec292730c96ef2 38 SUPERFAMILY SSF57840 1 38 5.89E-17 T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS02150 1d39cb39316a9c2998ec292730c96ef2 38 ProSitePatterns PS00828 Ribosomal protein L36 signature. 11 37 - T 28-03-2018 IPR000473 Ribosomal protein L36 GO:0003735|GO:0005622|GO:0005840|GO:0006412 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS28590 399060717b7060954eaf1c3f46c5fdf4 119 Pfam PF03713 Domain of unknown function (DUF305) 25 112 1.3E-21 T 28-03-2018 IPR005183 Domain of unknown function DUF305 CI104_RS28590 399060717b7060954eaf1c3f46c5fdf4 119 Gene3D G3DSA:1.20.1260.10 8 116 4.7E-28 T 28-03-2018 IPR012347 Ferritin-related CI104_RS24565 6e4519afc956ead72b5f0a9fc0f2376e 210 Hamap MF_00321 Probable GTP-binding protein EngB [engB]. 14 197 28.679 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CI104_RS24565 6e4519afc956ead72b5f0a9fc0f2376e 210 SUPERFAMILY SSF52540 17 199 8.93E-35 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS24565 6e4519afc956ead72b5f0a9fc0f2376e 210 Pfam PF01926 50S ribosome-binding GTPase 28 146 4.1E-20 T 28-03-2018 IPR006073 GTP binding domain GO:0005525 CI104_RS24565 6e4519afc956ead72b5f0a9fc0f2376e 210 Gene3D G3DSA:3.40.50.300 5 208 1.6E-28 T 28-03-2018 CI104_RS24565 6e4519afc956ead72b5f0a9fc0f2376e 210 TIGRFAM TIGR03598 GTPase_YsxC: ribosome biogenesis GTP-binding protein YsxC 10 193 5.8E-76 T 28-03-2018 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC GO:0005525 CI104_RS08035 e92da482a4d3ecb6a8dae890b7d1ee71 522 Pfam PF01654 Cytochrome bd terminal oxidase subunit I 7 501 1.1E-173 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CI104_RS08035 e92da482a4d3ecb6a8dae890b7d1ee71 522 PIRSF PIRSF006446 1 328 2.9E-114 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CI104_RS08035 e92da482a4d3ecb6a8dae890b7d1ee71 522 PIRSF PIRSF006446 355 522 3.8E-29 T 28-03-2018 IPR002585 Cytochrome ubiquinol oxidase subunit 1 GO:0009055|GO:0019646|GO:0070069 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 Gene3D G3DSA:3.50.50.60 6 162 4.6E-20 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 SUPERFAMILY SSF51905 162 340 9.72E-21 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 Gene3D G3DSA:3.50.50.60 163 342 7.9E-24 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 163 188 1.9E-9 T 28-03-2018 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 10 32 1.9E-9 T 28-03-2018 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 PRINTS PR00411 Pyridine nucleotide disulphide reductase class-I signature 299 306 1.9E-9 T 28-03-2018 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 SUPERFAMILY SSF51905 8 215 2.19E-33 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 163 181 2.9E-8 T 28-03-2018 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 103 121 2.9E-8 T 28-03-2018 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 PRINTS PR00368 FAD-dependent pyridine nucleotide reductase signature 11 30 2.9E-8 T 28-03-2018 CI104_RS26370 fa2175043b8d4163c77a1df0532850e1 436 Pfam PF07992 Pyridine nucleotide-disulphide oxidoreductase 10 327 4.7E-49 T 28-03-2018 IPR023753 FAD/NAD(P)-binding domain GO:0016491|GO:0055114 CI104_RS28385 59301c78eed9de145c4977c76d5bc03e 651 Pfam PF06986 Type-1V conjugative transfer system mating pair stabilisation 355 600 2.1E-83 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CI104_RS28385 59301c78eed9de145c4977c76d5bc03e 651 TIGRFAM TIGR02750 TraN_Ftype: type-F conjugative transfer system mating-pair stabilization protein TraN 14 640 3.4E-154 T 28-03-2018 IPR014121 Type-F conjugative transfer system mating-pair stabilisation protein TraN CI104_RS19855 f79afb36b6c4b937a6d3096043db4fd0 373 TIGRFAM TIGR00075 hypD: hydrogenase expression/formation protein HypD 2 371 2.1E-176 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CI104_RS19855 f79afb36b6c4b937a6d3096043db4fd0 373 Pfam PF01924 Hydrogenase formation hypA family 14 367 9.8E-152 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CI104_RS19855 f79afb36b6c4b937a6d3096043db4fd0 373 PIRSF PIRSF005622 1 372 5.8E-159 T 28-03-2018 IPR002780 Hydrogenase formation HypD protein GO:0046872 CI104_RS16105 088b3cff5b3df5cc9b4b01635b7499d1 93 Hamap MF_00330 Cobalt transport protein CbiN [cbiN]. 1 93 44.838 T 28-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CI104_RS16105 088b3cff5b3df5cc9b4b01635b7499d1 93 TIGRFAM TIGR01165 cbiN: cobalt transport protein 1 85 6.4E-38 T 28-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CI104_RS16105 088b3cff5b3df5cc9b4b01635b7499d1 93 Pfam PF02553 Cobalt transport protein component CbiN 5 69 2.6E-28 T 28-03-2018 IPR003705 Cobalt transport protein CbiN GO:0006824|GO:0009236|GO:0015087|GO:0016020 CI104_RS21575 8835a387fb4d92cb77a8a561c138c095 287 SUPERFAMILY SSF50956 43 284 1.44E-33 T 28-03-2018 CI104_RS21575 8835a387fb4d92cb77a8a561c138c095 287 Gene3D G3DSA:2.120.10.30 24 285 1.0E-10 T 28-03-2018 IPR011042 Six-bladed beta-propeller, TolB-like CI104_RS21575 8835a387fb4d92cb77a8a561c138c095 287 Pfam PF06977 SdiA-regulated 40 282 8.0E-85 T 28-03-2018 IPR009722 SdiA-regulated CI104_RS21555 202113e8ab7fe38f67971176c1784818 79 Pfam PF09932 Uncharacterized conserved protein (DUF2164) 4 73 9.1E-21 T 28-03-2018 IPR018680 Protein of unknown function DUF2164 CI104_RS12525 02c7414932306575facd52f33465df3d 146 Pfam PF10754 Protein of unknown function (DUF2569) 7 144 2.1E-41 T 28-03-2018 IPR019690 Protein of unknown function DUF2569 CI104_RS02380 ba7c9bbbf518e0d30652e0fba09c75c1 337 SUPERFAMILY SSF53613 20 333 1.54E-68 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS02380 ba7c9bbbf518e0d30652e0fba09c75c1 337 Pfam PF00294 pfkB family carbohydrate kinase 50 322 8.5E-43 T 28-03-2018 IPR011611 Carbohydrate kinase PfkB CI104_RS02380 ba7c9bbbf518e0d30652e0fba09c75c1 337 Gene3D G3DSA:3.40.1190.20 21 337 9.5E-57 T 28-03-2018 IPR029056 Ribokinase-like CI104_RS19370 f2040ae59c34cab622ae3723608101ad 477 Pfam PF00939 Sodium:sulfate symporter transmembrane region 7 472 9.4E-146 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS19370 f2040ae59c34cab622ae3723608101ad 477 TIGRFAM TIGR00785 dass: transporter, divalent anion:Na+ symporter (DASS) family 24 468 3.7E-142 T 28-03-2018 IPR001898 Solute carrier family 13 GO:0005215|GO:0006814|GO:0016020|GO:0055085 Reactome: R-HSA-433137 CI104_RS19370 f2040ae59c34cab622ae3723608101ad 477 PIRSF PIRSF002457 1 473 1.6E-131 T 28-03-2018 IPR030676 Citrate carrier CitT-related CI104_RS10510 51491a2cccf7a0c50dfab742a6ae7b88 173 Pfam PF02620 Uncharacterized ACR, COG1399 62 171 2.3E-19 T 28-03-2018 IPR003772 Large ribosomal RNA subunit accumulation protein YceD CI104_RS12645 dcfed892411365aabe87dab4c1cbe549 109 Pfam PF00893 Small Multidrug Resistance protein 6 99 4.9E-28 T 28-03-2018 IPR000390 Small multidrug resistance protein family GO:0016021 CI104_RS12645 dcfed892411365aabe87dab4c1cbe549 109 Hamap MF_01597 Spermidine export protein MdtI [mdtI]. 1 109 33.9 T 28-03-2018 IPR023737 Spermidine export protein MdtI GO:0005886|GO:0015606|GO:0015848 CI104_RS12645 dcfed892411365aabe87dab4c1cbe549 109 SUPERFAMILY SSF103481 12 108 4.32E-17 T 28-03-2018 CI104_RS12745 fb9b781b118557c3ba417eb35301427e 113 ProDom PD073251 YNFB PERIPLASMIC SECRETED ORF9 PRECURSOR SIGNAL SIMILAR ECS2289 EXPORTED ESCHERICHIA 1 113 5.0E-52 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 CI104_RS12745 fb9b781b118557c3ba417eb35301427e 113 Pfam PF06932 Protein of unknown function (DUF1283) 32 113 9.2E-42 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 CI104_RS12745 fb9b781b118557c3ba417eb35301427e 113 Hamap MF_01581 UPF0482 protein YnfB [ynfB]. 2 113 27.203 T 28-03-2018 IPR009700 Protein of unknown function DUF1283 CI104_RS20600 fdc7232af4b9edfca24118ee1f45fe1a 207 Pfam PF14090 Helix-turn-helix domain 145 207 7.5E-5 T 28-03-2018 CI104_RS01305 5cd0096f72d306364b785365849e452f 117 Gene3D G3DSA:3.10.129.10 5 117 2.1E-23 T 28-03-2018 CI104_RS01305 5cd0096f72d306364b785365849e452f 117 PIRSF PIRSF030962 1 117 3.4E-54 T 28-03-2018 IPR016962 Dehydrase, ECs4332, predicted KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS01305 5cd0096f72d306364b785365849e452f 117 SUPERFAMILY SSF54637 8 103 1.76E-16 T 28-03-2018 IPR029069 HotDog domain CI104_RS01305 5cd0096f72d306364b785365849e452f 117 Pfam PF07977 FabA-like domain 15 88 3.0E-6 T 28-03-2018 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ KEGG: 00061+4.2.1.59|KEGG: 00780+4.2.1.59|MetaCyc: PWY-5971|MetaCyc: PWY-5973|MetaCyc: PWY-5989|MetaCyc: PWY-5994|MetaCyc: PWY-6113|MetaCyc: PWY-6282|MetaCyc: PWY-6519|MetaCyc: PWY-7388|MetaCyc: PWY-7663|MetaCyc: PWY-7664|MetaCyc: PWY-7858|MetaCyc: PWYG-321 CI104_RS15465 44fc73fd69e7590a5f555e525c1017c0 849 Pfam PF13953 PapC C-terminal domain 760 824 8.0E-18 T 28-03-2018 IPR025949 PapC-like, C-terminal domain CI104_RS15465 44fc73fd69e7590a5f555e525c1017c0 849 SUPERFAMILY SSF141729 66 177 7.46E-22 T 28-03-2018 CI104_RS15465 44fc73fd69e7590a5f555e525c1017c0 849 Pfam PF13954 PapC N-terminal domain 40 187 5.3E-30 T 28-03-2018 IPR025885 PapC, N-terminal domain GO:0005515 CI104_RS15465 44fc73fd69e7590a5f555e525c1017c0 849 Pfam PF00577 Outer membrane usher protein 201 751 3.6E-177 T 28-03-2018 IPR000015 Outer membrane usher protein GO:0005215|GO:0006810|GO:0016020 CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 Hamap MF_00144 tRNA-specific 2-thiouridylase MnmA [mnmA]. 6 361 41.033 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 Gene3D G3DSA:3.40.50.620 1 212 4.3E-66 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 Gene3D G3DSA:2.40.30.10 282 365 2.1E-28 T 28-03-2018 CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 Pfam PF03054 tRNA methyl transferase 6 360 6.4E-144 T 28-03-2018 CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 Gene3D G3DSA:2.30.30.280 213 280 6.2E-29 T 28-03-2018 IPR023382 Adenine nucleotide alpha hydrolase-like domains GO:0016783 Reactome: R-HSA-6787450 CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 SUPERFAMILY SSF52402 4 295 2.43E-57 T 28-03-2018 CI104_RS10995 c910a3c510bda89f54e3bec2fa39c7a9 368 TIGRFAM TIGR00420 trmU: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 6 360 2.6E-159 T 28-03-2018 IPR004506 tRNA-specific 2-thiouridylase GO:0008033|GO:0016740 Reactome: R-HSA-6787450 CI104_RS05600 1b79be33197444fd2ac2691a66bb07a1 161 Pfam PF14113 Type VI secretion system (T6SS), amidase effector protein 4 41 139 1.4E-22 T 28-03-2018 IPR025562 Type VI secretion system (T6SS), amidase effector protein 4 CI104_RS03190 3b07b1ef97c7140ea9ab1128cec08728 233 Gene3D G3DSA:2.60.120.10 12 133 1.3E-21 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS03190 3b07b1ef97c7140ea9ab1128cec08728 233 Gene3D G3DSA:2.60.120.10 134 233 2.4E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS03190 3b07b1ef97c7140ea9ab1128cec08728 233 Pfam PF02678 Pirin 5 119 4.1E-23 T 28-03-2018 IPR003829 Pirin, N-terminal domain Reactome: R-HSA-8935690 CI104_RS03190 3b07b1ef97c7140ea9ab1128cec08728 233 PIRSF PIRSF006232 1 230 2.9E-32 T 28-03-2018 IPR012093 Pirin Reactome: R-HSA-8935690 CI104_RS03190 3b07b1ef97c7140ea9ab1128cec08728 233 SUPERFAMILY SSF51182 1 231 1.19E-43 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS11305 400cc1c6db8afd2511cca28244df315f 837 Pfam PF09718 Lambda phage tail tape-measure protein (Tape_meas_lam_C) 634 707 1.2E-23 T 28-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CI104_RS11305 400cc1c6db8afd2511cca28244df315f 837 Pfam PF06791 Prophage tail length tape measure protein 55 257 2.9E-64 T 28-03-2018 IPR009628 Bacteriophage lambda, GpH, tail tape measure, N-terminal CI104_RS11305 400cc1c6db8afd2511cca28244df315f 837 TIGRFAM TIGR01541 tape_meas_lam_C: phage tail tape measure protein, lambda family 475 718 1.9E-42 T 28-03-2018 IPR006431 Bacteriophage lambda, GpH, tail tape measure, C-terminal CI104_RS27380 938d9e8c0b57bb93394b1a2dd1a3cf9e 497 Pfam PF04986 Putative transposase 171 393 9.0E-58 T 28-03-2018 IPR007069 Transposase, IS801/IS1294 GO:0003677|GO:0004803|GO:0006313 CI104_RS27380 938d9e8c0b57bb93394b1a2dd1a3cf9e 497 Pfam PF14319 Transposase zinc-binding domain 39 142 9.6E-26 T 28-03-2018 IPR026889 Transposase zinc-binding domain CI104_RS05620 67cb946d79de2d356fec27786ae60442 447 TIGRFAM TIGR03353 VI_chp_4: type VI secretion protein, VC_A0114 family 5 445 3.7E-133 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CI104_RS05620 67cb946d79de2d356fec27786ae60442 447 Pfam PF05936 Bacterial Type VI secretion, VC_A0110, EvfL, ImpJ, VasE 20 444 1.8E-133 T 28-03-2018 IPR010263 Type VI secretion protein, VC_A0114 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 Pfam PF00267 Gram-negative porin 27 350 5.5E-146 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 ProSitePatterns PS00576 General diffusion Gram-negative porins signature. 305 321 - T 28-03-2018 IPR013793 Porin, Gram-negative type, conserved site CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 Gene3D G3DSA:2.40.160.10 32 350 1.6E-52 T 28-03-2018 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 261 280 5.6E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 233 250 5.6E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 22 38 5.6E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 51 69 5.6E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 94 116 5.6E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00183 E.coli/Salmonella-type porin signature 149 171 5.6E-71 T 28-03-2018 IPR001897 Porin, gammaproteobacterial GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 SUPERFAMILY SSF56935 22 350 2.17E-77 T 28-03-2018 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 94 104 1.3E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 151 162 1.3E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 305 322 1.3E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 227 239 1.3E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS05775 a0503e538c855e61245d781335cd15fc 350 PRINTS PR00182 E.coli/Neisseria porin superfamily signature 52 63 1.3E-17 T 28-03-2018 IPR001702 Porin, Gram-negative type GO:0006810|GO:0015288|GO:0016020 CI104_RS03410 aea3eaf8bb83ab3e61bb559ae073927a 258 Gene3D G3DSA:1.20.5.50 23 108 2.5E-5 T 28-03-2018 CI104_RS03410 aea3eaf8bb83ab3e61bb559ae073927a 258 Gene3D G3DSA:1.20.5.50 114 237 0.13 T 28-03-2018 CI104_RS04315 6601c4e4c0f38ff332c4438b3ff74bce 225 SMART SM00382 27 210 2.1E-6 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS04315 6601c4e4c0f38ff332c4438b3ff74bce 225 SUPERFAMILY SSF52540 21 221 2.83E-33 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS04315 6601c4e4c0f38ff332c4438b3ff74bce 225 Gene3D G3DSA:3.40.50.300 21 223 5.5E-34 T 28-03-2018 CI104_RS04315 6601c4e4c0f38ff332c4438b3ff74bce 225 Pfam PF00005 ABC transporter 26 170 5.7E-20 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS11900 9ee7290ec02b1f4b711d45b660023478 286 SUPERFAMILY SSF56112 3 281 3.98E-41 T 28-03-2018 IPR011009 Protein kinase-like domain CI104_RS11900 9ee7290ec02b1f4b711d45b660023478 286 Gene3D G3DSA:3.90.1200.10 95 277 4.0E-17 T 28-03-2018 CI104_RS11900 9ee7290ec02b1f4b711d45b660023478 286 PIRSF PIRSF006221 1 286 2.1E-94 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CI104_RS11900 9ee7290ec02b1f4b711d45b660023478 286 Pfam PF03881 Fructosamine kinase 1 285 7.6E-115 T 28-03-2018 IPR016477 Fructosamine/Ketosamine-3-kinase Reactome: R-HSA-163841 CI104_RS11900 9ee7290ec02b1f4b711d45b660023478 286 Gene3D G3DSA:3.30.200.20 1 91 3.0E-19 T 28-03-2018 CI104_RS06520 3fffd2bb7fb15178eeb24f3b6e7be44c 83 Gene3D G3DSA:1.10.1220.10 2 39 3.6E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS23900 ba7548bfa9a73170c888c605a32a035b 217 Gene3D G3DSA:1.10.357.10 3 199 3.0E-26 T 28-03-2018 CI104_RS23900 ba7548bfa9a73170c888c605a32a035b 217 SUPERFAMILY SSF46689 2 78 6.14E-13 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS23900 ba7548bfa9a73170c888c605a32a035b 217 Pfam PF00440 Bacterial regulatory proteins, tetR family 23 59 3.3E-8 T 28-03-2018 IPR001647 DNA-binding HTH domain, TetR-type GO:0003677 CI104_RS23900 ba7548bfa9a73170c888c605a32a035b 217 Hamap MF_01190 HTH-type transcriptional repressor FabR [fabR]. 2 210 52.293 T 28-03-2018 IPR023764 Transcriptional repressor HTH, FabR CI104_RS12430 2a68f689acc8ecbb0fe5e8e4d8f7514e 671 Pfam PF04632 Fusaric acid resistance protein family 20 663 1.4E-164 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CI104_RS15665 2cb3c8e117520d25fa0b07fe73ff3b32 180 Pfam PF00196 Bacterial regulatory proteins, luxR family 105 153 6.2E-8 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15665 2cb3c8e117520d25fa0b07fe73ff3b32 180 Gene3D G3DSA:1.10.10.10 47 162 3.7E-7 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS15665 2cb3c8e117520d25fa0b07fe73ff3b32 180 SMART SM00421 103 160 0.0028 T 28-03-2018 IPR000792 Transcription regulator LuxR, C-terminal GO:0006355 CI104_RS15665 2cb3c8e117520d25fa0b07fe73ff3b32 180 SUPERFAMILY SSF46894 97 153 1.36E-8 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS13745 990893c01fac2696065d03a50b39a1e1 311 SUPERFAMILY SSF52402 17 235 2.39E-54 T 28-03-2018 CI104_RS13745 990893c01fac2696065d03a50b39a1e1 311 Gene3D G3DSA:3.40.50.620 6 246 6.0E-39 T 28-03-2018 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CI104_RS13745 990893c01fac2696065d03a50b39a1e1 311 Hamap MF_01850 tRNA 2-thiocytidine biosynthesis protein TtcA [ttcA]. 10 271 57.613 T 28-03-2018 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA GO:0008033 CI104_RS13745 990893c01fac2696065d03a50b39a1e1 311 PIRSF PIRSF004976 2 269 3.8E-76 T 28-03-2018 IPR035107 tRNA thiolation protein, TtcA/Ctu1 type GO:0008033 Reactome: R-HSA-6782315 CI104_RS13745 990893c01fac2696065d03a50b39a1e1 311 Pfam PF01171 PP-loop family 42 205 3.1E-13 T 28-03-2018 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal Reactome: R-HSA-6782315 CI104_RS14030 f9f96f323c980defc207dd29d4790e45 379 Gene3D G3DSA:1.20.1290.10 52 189 2.8E-4 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS14030 f9f96f323c980defc207dd29d4790e45 379 Gene3D G3DSA:1.20.1290.10 224 379 1.0E-11 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS14030 f9f96f323c980defc207dd29d4790e45 379 SUPERFAMILY SSF69118 212 377 2.64E-15 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS14030 f9f96f323c980defc207dd29d4790e45 379 SUPERFAMILY SSF69118 79 186 4.03E-13 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS17870 66abf7c9d34f9f9678c20a39832e3833 203 Pfam PF06353 Protein of unknown function (DUF1062) 36 165 9.5E-37 T 28-03-2018 IPR009412 Protein of unknown function DUF1062 CI104_RS17870 66abf7c9d34f9f9678c20a39832e3833 203 PIRSF PIRSF021719 1 201 1.2E-63 T 28-03-2018 IPR009412 Protein of unknown function DUF1062 CI104_RS28410 c802dc0607b14415627f68758698d342 79 Pfam PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) 5 71 2.1E-15 T 28-03-2018 IPR014112 Type-F conjugative transfer system pilin chaperone TraQ CI104_RS15225 4b217fd6c9e2c926bcaad59a5308dcaa 427 TIGRFAM TIGR00155 pqiA_fam: integral membrane protein, PqiA family 17 417 5.9E-193 T 28-03-2018 IPR005219 Conserved hypothetical protein CHP00155 CI104_RS15225 4b217fd6c9e2c926bcaad59a5308dcaa 427 Pfam PF04403 Paraquat-inducible protein A 67 217 1.2E-37 T 28-03-2018 IPR007498 Paraquat-inducible protein A CI104_RS15225 4b217fd6c9e2c926bcaad59a5308dcaa 427 Pfam PF04403 Paraquat-inducible protein A 263 418 1.2E-43 T 28-03-2018 IPR007498 Paraquat-inducible protein A CI104_RS08815 9ac1de04e9ff27c2b899097c07a60425 299 Pfam PF03956 Lysine exporter LysO 113 297 2.3E-58 T 28-03-2018 IPR005642 Lysine exporter LysO CI104_RS08815 9ac1de04e9ff27c2b899097c07a60425 299 ProDom PD022789 MEMBRANE SURFACE PRECURSOR SIGNAL PROTEIN YBJE TRANSMEMBRANE INNER PREDICTED STY0934 135 296 3.0E-66 T 28-03-2018 IPR005642 Lysine exporter LysO CI104_RS04115 bb4330f3dd8ef5d01956e099cdce895c 235 Pfam PF04474 Protein of unknown function (DUF554) 3 227 1.4E-66 T 28-03-2018 IPR007563 Protein of unknown function DUF554 CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 Gene3D G3DSA:3.40.50.1000 32 207 7.0E-22 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 136 152 3.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 105 118 3.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 10 21 3.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 PRINTS PR00413 Haloacid dehalogenase/epoxide hydrolase family signature 154 174 3.9E-5 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 TIGRFAM TIGR01509 HAD-SF-IA-v3: HAD hydrolase, family IA, variant 3 13 191 1.8E-16 T 28-03-2018 IPR006439 HAD hydrolase, subfamily IA GO:0008152|GO:0016787 CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 Pfam PF13419 Haloacid dehalogenase-like hydrolase 13 190 7.9E-9 T 28-03-2018 IPR023214 HAD-like domain CI104_RS01745 f3258de3a9a133be0d575df036699de5 222 SUPERFAMILY SSF56784 6 217 1.57E-45 T 28-03-2018 IPR023214 HAD-like domain CI104_RS14390 fffc15dd82df28db3035863c0c8f950a 117 SUPERFAMILY SSF75169 1 117 8.51E-35 T 28-03-2018 IPR027396 DsrEFH-like CI104_RS14390 fffc15dd82df28db3035863c0c8f950a 117 Gene3D G3DSA:3.40.1260.10 1 117 6.5E-29 T 28-03-2018 CI104_RS14390 fffc15dd82df28db3035863c0c8f950a 117 Pfam PF02635 DsrE/DsrF-like family 2 117 1.2E-22 T 28-03-2018 IPR003787 Sulphur relay, DsrE/F-like protein CI104_RS24755 dfb820ef2f886c7ed465560533285661 206 TIGRFAM TIGR00949 2A76: homoserine/Threonine efflux protein 18 202 5.3E-70 T 28-03-2018 IPR004778 Homoserine/Threonine efflux protein GO:0016021 CI104_RS24755 dfb820ef2f886c7ed465560533285661 206 Pfam PF01810 LysE type translocator 14 205 2.4E-57 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS24755 dfb820ef2f886c7ed465560533285661 206 PIRSF PIRSF006324 1 206 1.7E-41 T 28-03-2018 IPR001123 Amino acid exporter protein, LeuE-type GO:0006865|GO:0016020 CI104_RS19955 0bd9cf57aaf1b14bfc177f66e6b05f9f 103 Gene3D G3DSA:1.20.5.1000 27 78 1.9E-4 T 28-03-2018 CI104_RS19955 0bd9cf57aaf1b14bfc177f66e6b05f9f 103 Pfam PF04977 Septum formation initiator 11 89 1.2E-31 T 28-03-2018 IPR007060 Septum formation initiator FtsL/DivIC GO:0007049 CI104_RS19955 0bd9cf57aaf1b14bfc177f66e6b05f9f 103 Hamap MF_00599 Cell division protein FtsB [ftsB]. 1 90 36.547 T 28-03-2018 IPR023081 Cell division protein FtsB CI104_RS14755 9ba8114ccbee5dea0a6f52e6169c0a71 196 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 191 2.0E-34 T 28-03-2018 IPR018755 Bacteriophage Mu-like, Gp48 CI104_RS02620 39724aba6daa5ed9b80bd8b2d3926de2 155 TIGRFAM TIGR00022 TIGR00022: YhcH/YjgK/YiaL family protein 1 152 8.5E-56 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family CI104_RS02620 39724aba6daa5ed9b80bd8b2d3926de2 155 Pfam PF04074 Domain of unknown function (DUF386) 1 149 1.0E-39 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family CI104_RS02620 39724aba6daa5ed9b80bd8b2d3926de2 155 Gene3D G3DSA:2.60.120.370 1 153 6.7E-45 T 28-03-2018 IPR004375 YhcH/YjgK/YiaL family CI104_RS02620 39724aba6daa5ed9b80bd8b2d3926de2 155 SUPERFAMILY SSF51197 1 153 6.87E-41 T 28-03-2018 CI104_RS25410 f454dc0bb7ab90563a220639fe9f05bb 1434 Gene3D G3DSA:2.60.40.10 1349 1420 0.14 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS25410 f454dc0bb7ab90563a220639fe9f05bb 1434 Gene3D G3DSA:2.60.40.10 1048 1148 0.019 T 28-03-2018 IPR013783 Immunoglobulin-like fold CI104_RS25410 f454dc0bb7ab90563a220639fe9f05bb 1434 Gene3D G3DSA:2.60.40.1310 1205 1348 8.7E-5 T 28-03-2018 CI104_RS16755 e9b40493c7127e200da936dea4269f7f 305 Gene3D G3DSA:3.40.190.10 21 142 8.6E-22 T 28-03-2018 CI104_RS16755 e9b40493c7127e200da936dea4269f7f 305 SUPERFAMILY SSF53850 26 303 5.74E-60 T 28-03-2018 CI104_RS16755 e9b40493c7127e200da936dea4269f7f 305 Gene3D G3DSA:3.40.190.120 143 242 6.1E-25 T 28-03-2018 CI104_RS16755 e9b40493c7127e200da936dea4269f7f 305 Pfam PF04069 Substrate binding domain of ABC-type glycine betaine transport system 26 300 4.6E-60 T 28-03-2018 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain GO:0005215|GO:0006810 CI104_RS16790 3f8098d43cefa42674a770649999baea 191 Pfam PF09335 SNARE associated Golgi protein 23 143 1.8E-17 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS20810 183581af0970504bbf1e40eac5dc3d84 318 SUPERFAMILY SSF161098 90 297 3.82E-20 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS20810 183581af0970504bbf1e40eac5dc3d84 318 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 312 9.8E-37 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS20810 183581af0970504bbf1e40eac5dc3d84 318 Gene3D G3DSA:1.10.3720.10 1 301 9.9E-44 T 28-03-2018 CI104_RS00315 e35d7abbd263ce1001901b2d1e2e5588 369 SUPERFAMILY SSF53383 12 365 1.98E-32 T 28-03-2018 IPR015424 Pyridoxal phosphate-dependent transferase CI104_RS00315 e35d7abbd263ce1001901b2d1e2e5588 369 Gene3D G3DSA:3.40.640.10 29 271 5.9E-22 T 28-03-2018 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 GO:0003824 CI104_RS00315 e35d7abbd263ce1001901b2d1e2e5588 369 Pfam PF03841 L-seryl-tRNA selenium transferase 14 267 2.2E-17 T 28-03-2018 IPR018319 L-seryl-tRNA selenium transferase-like KEGG: 00450+2.9.1.1|KEGG: 00970+2.9.1.1 CI104_RS00315 e35d7abbd263ce1001901b2d1e2e5588 369 TIGRFAM TIGR01437 selA_rel: uncharacterized pyridoxal phosphate-dependent enzyme 5 363 6.8E-160 T 28-03-2018 IPR006337 Pyridoxal phosphate-dependent enzyme, SelA-like KEGG: 00030+4.3.1.29|MetaCyc: PWY-7310 CI104_RS22770 91e37f02c4b5ced37bd11d2488ebb0bd 194 Pfam PF00419 Fimbrial protein 47 186 6.0E-9 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22770 91e37f02c4b5ced37bd11d2488ebb0bd 194 Gene3D G3DSA:2.60.40.1090 56 194 3.5E-6 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22770 91e37f02c4b5ced37bd11d2488ebb0bd 194 SUPERFAMILY SSF49401 57 193 6.46E-8 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22605 2e9e83cedf0e1a426fe23b4e8a12f30b 104 ProDom PD069399 MEMBRANE INNER YJEO SIMILAR INTEGRAL ORF22 ESCHERICHIA TRANSMEMBRANE COLI 12 103 5.0E-22 T 28-03-2018 IPR022553 Protein of unknown function DUF2645 CI104_RS22605 2e9e83cedf0e1a426fe23b4e8a12f30b 104 Pfam PF10840 Protein of unknown function (DUF2645) 7 103 9.1E-28 T 28-03-2018 IPR022553 Protein of unknown function DUF2645 CI104_RS18710 119b7005b0202d6175a5fc80eb86c424 140 Pfam PF07681 DoxX 16 97 1.3E-18 T 28-03-2018 IPR032808 DoxX family CI104_RS13920 06e485b631c26488b71c24477c7895d9 301 Pfam PF09381 Outer membrane protein G (OmpG) 1 301 2.5E-186 T 28-03-2018 IPR018981 Outer membrane protein G CI104_RS13920 06e485b631c26488b71c24477c7895d9 301 SUPERFAMILY SSF56935 47 201 5.68E-5 T 28-03-2018 CI104_RS13920 06e485b631c26488b71c24477c7895d9 301 SUPERFAMILY SSF56935 243 301 5.68E-5 T 28-03-2018 CI104_RS13920 06e485b631c26488b71c24477c7895d9 301 Gene3D G3DSA:2.40.160.40 22 301 1.7E-64 T 28-03-2018 CI104_RS00890 13c4245758f844446c2614948e06fb20 236 Pfam PF11254 Protein of unknown function (DUF3053) 15 230 4.7E-91 T 28-03-2018 IPR021413 Protein of unknown function DUF3053 CI104_RS09895 abdc2400a58246f2bae50b5de4aacf2e 107 SUPERFAMILY SSF54909 1 107 1.13E-28 T 28-03-2018 IPR011008 Dimeric alpha-beta barrel CI104_RS09895 abdc2400a58246f2bae50b5de4aacf2e 107 Pfam PF05336 L-rhamnose mutarotase 3 106 1.7E-32 T 28-03-2018 IPR008000 Rhamnose/fucose mutarotase GO:0005737|GO:0016857 CI104_RS15150 46998088ab916aba41aac492cb0f6816 206 Hamap MF_01521 Probable manganese efflux pump MntP [mntP]. 19 203 25.775 T 28-03-2018 IPR022929 Putative manganese efflux pump MntP CI104_RS15150 46998088ab916aba41aac492cb0f6816 206 Pfam PF02659 Putative manganese efflux pump 49 200 1.2E-53 T 28-03-2018 IPR003810 Putative manganese efflux pump CI104_RS28305 2785b244006b31c85f868056be49ed93 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 1.6E-52 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CI104_RS28305 2785b244006b31c85f868056be49ed93 188 Pfam PF05309 TraE protein 1 182 2.0E-60 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CI104_RS05580 ed0ee05094711decfe36a8240b561166 504 TIGRFAM TIGR03355 VI_chp_2: type VI secretion protein, EvpB/VC_A0108 family 22 497 1.3E-216 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CI104_RS05580 ed0ee05094711decfe36a8240b561166 504 Pfam PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath 72 497 7.5E-189 T 28-03-2018 IPR010269 Type VI secretion protein, EvpB/VC_A0108, tail sheath CI104_RS13780 1f928dc1a7613be7a638a9e5a7648ffa 129 TIGRFAM TIGR02425 decarb_PcaC: 4-carboxymuconolactone decarboxylase 4 124 2.3E-55 T 28-03-2018 IPR012788 4-carboxymuconolactone decarboxylase KEGG: 00362+4.1.1.44 CI104_RS13780 1f928dc1a7613be7a638a9e5a7648ffa 129 Gene3D G3DSA:1.20.1290.10 7 129 1.2E-37 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS13780 1f928dc1a7613be7a638a9e5a7648ffa 129 SUPERFAMILY SSF69118 4 122 5.76E-39 T 28-03-2018 IPR029032 AhpD-like Reactome: R-HSA-5628897 CI104_RS13780 1f928dc1a7613be7a638a9e5a7648ffa 129 Pfam PF02627 Carboxymuconolactone decarboxylase family 36 118 1.9E-25 T 28-03-2018 IPR003779 Carboxymuconolactone decarboxylase-like GO:0051920|GO:0055114 KEGG: 00480+1.11.1.15 CI104_RS24710 0330d1733b1bf080b9fc4472279e7f9d 475 Gene3D G3DSA:1.20.5.340 147 298 8.7E-24 T 28-03-2018 CI104_RS24710 0330d1733b1bf080b9fc4472279e7f9d 475 Pfam PF02646 RmuC family 136 432 3.8E-107 T 28-03-2018 IPR003798 DNA recombination RmuC CI104_RS10260 50baf98bcaf9e4d69139af9b253844b5 151 Pfam PF07012 Curlin associated repeat 108 141 1.2E-7 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS10260 50baf98bcaf9e4d69139af9b253844b5 151 Pfam PF07012 Curlin associated repeat 40 74 6.5E-7 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS10260 50baf98bcaf9e4d69139af9b253844b5 151 Pfam PF07012 Curlin associated repeat 86 119 3.8E-10 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS10260 50baf98bcaf9e4d69139af9b253844b5 151 Pfam PF07012 Curlin associated repeat 67 96 9.2E-6 T 28-03-2018 IPR009742 Curlin associated GO:0007155|GO:0009289 CI104_RS13885 05100db1646cf65251018d1c67b8aeb1 465 Pfam PF04317 YcjX-like family, DUF463 20 464 7.6E-184 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CI104_RS13885 05100db1646cf65251018d1c67b8aeb1 465 Gene3D G3DSA:3.40.50.300 14 436 1.7E-15 T 28-03-2018 CI104_RS13885 05100db1646cf65251018d1c67b8aeb1 465 PIRSF PIRSF019381 1 465 5.9E-217 T 28-03-2018 IPR007413 Protein of unknown function DUF463, YcjX-like protein CI104_RS10680 05295bf1481306bbcfb0bc07a74be819 589 Gene3D G3DSA:3.30.420.10 146 355 3.4E-27 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS10680 05295bf1481306bbcfb0bc07a74be819 589 SUPERFAMILY SSF53098 196 338 1.49E-13 T 28-03-2018 IPR012337 Ribonuclease H-like domain GO:0003676 CI104_RS10680 05295bf1481306bbcfb0bc07a74be819 589 Gene3D G3DSA:1.10.10.60 3 50 1.4E-4 T 28-03-2018 CI104_RS10680 05295bf1481306bbcfb0bc07a74be819 589 Pfam PF00665 Integrase core domain 152 298 3.1E-12 T 28-03-2018 IPR001584 Integrase, catalytic core GO:0015074 CI104_RS21505 44be1a02e281d5f45f174e2f7fe71dd4 253 Pfam PF03328 HpcH/HpaI aldolase/citrate lyase family 17 230 1.7E-26 T 28-03-2018 IPR005000 HpcH/HpaI aldolase/citrate lyase domain GO:0003824 CI104_RS21505 44be1a02e281d5f45f174e2f7fe71dd4 253 SUPERFAMILY SSF51621 2 235 5.58E-59 T 28-03-2018 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain GO:0003824 CI104_RS21505 44be1a02e281d5f45f174e2f7fe71dd4 253 Gene3D G3DSA:3.20.20.60 5 244 1.5E-31 T 28-03-2018 CI104_RS05540 6cd4e54f16f4c6fcfb52ce1a0ea486e0 349 Pfam PF06812 ImpA, N-terminal, type VI secretion system 7 133 2.5E-26 T 28-03-2018 IPR010657 ImpA, N-terminal CI104_RS00335 70e1df51f29102f4efa8422979b1cb1e 171 Gene3D G3DSA:3.10.450.160 30 171 1.6E-27 T 28-03-2018 CI104_RS03350 09410ad39114175a927533996de051fb 352 PIRSF PIRSF016202 1 351 3.6E-96 T 28-03-2018 IPR007184 Mannoside phosphorylase CI104_RS03350 09410ad39114175a927533996de051fb 352 Pfam PF04041 beta-1,4-mannooligosaccharide phosphorylase 107 345 1.3E-50 T 28-03-2018 IPR007184 Mannoside phosphorylase CI104_RS03350 09410ad39114175a927533996de051fb 352 Gene3D G3DSA:2.115.10.20 1 351 1.5E-78 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS03350 09410ad39114175a927533996de051fb 352 SUPERFAMILY SSF75005 2 48 6.63E-77 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS03350 09410ad39114175a927533996de051fb 352 SUPERFAMILY SSF75005 103 342 6.63E-77 T 28-03-2018 IPR023296 Glycosyl hydrolase, five-bladed beta-propellor domain CI104_RS17875 4d068947cb54dcee2386b7976819c194 83 Pfam PF12674 Putative zinc ribbon domain 7 77 2.8E-7 T 28-03-2018 IPR025868 Putative zinc ribbon domain CI104_RS08590 3522f28f7f979a3e2cda540fc58bfc31 303 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 119 302 4.5E-31 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08590 3522f28f7f979a3e2cda540fc58bfc31 303 Gene3D G3DSA:1.10.3720.10 26 291 6.6E-45 T 28-03-2018 CI104_RS08590 3522f28f7f979a3e2cda540fc58bfc31 303 SUPERFAMILY SSF161098 96 283 3.4E-28 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08590 3522f28f7f979a3e2cda540fc58bfc31 303 Pfam PF12911 N-terminal TM domain of oligopeptide transport permease C 25 69 8.1E-13 T 28-03-2018 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CI104_RS06880 7519c4bc71629f91c1a9af3bd10fd297 327 Pfam PF01156 Inosine-uridine preferring nucleoside hydrolase 2 314 8.0E-64 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS06880 7519c4bc71629f91c1a9af3bd10fd297 327 Gene3D G3DSA:3.90.245.10 1 323 2.1E-80 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS06880 7519c4bc71629f91c1a9af3bd10fd297 327 SUPERFAMILY SSF53590 2 321 1.57E-74 T 28-03-2018 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CI104_RS11730 bdb1fd21e9db8c338ee7b6fe56c6efbf 91 Pfam PF07383 Protein of unknown function (DUF1496) 35 90 6.0E-25 T 28-03-2018 IPR009971 Protein of unknown function DUF1496 CI104_RS17355 789e2e979eba8a7da83e38f3bc73ab74 308 Pfam PF04754 Putative transposase, YhgA-like 8 209 1.3E-85 T 28-03-2018 IPR006842 Transposase (putative), YhgA-like CI104_RS17355 789e2e979eba8a7da83e38f3bc73ab74 308 TIGRFAM TIGR01784 T_den_put_tspse: conserved hypothetical protein 9 303 7.2E-54 T 28-03-2018 IPR010106 Recombination-promoting nuclease RpnA CI104_RS20550 f6794aaae4eaa88c2382d58665b7ac8b 287 Pfam PF11392 Protein of unknown function (DUF2877) 167 274 1.3E-23 T 28-03-2018 IPR021530 Protein of unknown function DUF2877 CI104_RS09980 be836c0af92089870bba160eaaf62cc8 356 Pfam PF03739 Predicted permease YjgP/YjgQ family 6 345 1.1E-53 T 28-03-2018 IPR005495 Permease LptG/LptF-related GO:0016021 CI104_RS09980 be836c0af92089870bba160eaaf62cc8 356 TIGRFAM TIGR04407 LptF_YjgP: LPS export ABC transporter permease LptF 3 345 1.1E-90 T 28-03-2018 IPR030922 LPS export ABC transporter permease LptF GO:0043190|GO:0055085 CI104_RS22400 9b90e01e80fb9c17c1225e26d5dc09de 214 Pfam PF04225 Opacity-associated protein A LysM-like domain 129 213 3.4E-34 T 28-03-2018 IPR007340 Opacity-associated protein A CI104_RS22400 9b90e01e80fb9c17c1225e26d5dc09de 214 Pfam PF08525 Opacity-associated protein A N-terminal motif 23 50 3.4E-8 T 28-03-2018 IPR013731 Opacity-associated protein A, N-terminal CI104_RS06940 418fd007f9e8c211c0fd1ed78b81675f 207 Pfam PF13472 GDSL-like Lipase/Acylhydrolase family 32 186 2.5E-25 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CI104_RS06940 418fd007f9e8c211c0fd1ed78b81675f 207 Gene3D G3DSA:3.40.50.1110 25 206 3.2E-38 T 28-03-2018 CI104_RS06940 418fd007f9e8c211c0fd1ed78b81675f 207 ProSitePatterns PS01098 Lipolytic enzymes "G-D-S-L" family, serine active site. 29 39 - T 28-03-2018 IPR008265 Lipase, GDSL, active site GO:0006629|GO:0016298 Reactome: R-HSA-1482788|Reactome: R-HSA-975634 CI104_RS06940 418fd007f9e8c211c0fd1ed78b81675f 207 SUPERFAMILY SSF52266 28 202 2.26E-51 T 28-03-2018 IPR013830 SGNH hydrolase-type esterase domain CI104_RS20080 a903d6b1a5cc1d676ec8073768602ad1 452 Pfam PF07690 Major Facilitator Superfamily 25 318 2.7E-48 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS20080 a903d6b1a5cc1d676ec8073768602ad1 452 SUPERFAMILY SSF103473 12 444 5.1E-82 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS20080 a903d6b1a5cc1d676ec8073768602ad1 452 Gene3D G3DSA:1.20.1250.20 238 445 1.1E-25 T 28-03-2018 CI104_RS20080 a903d6b1a5cc1d676ec8073768602ad1 452 PIRSF PIRSF002808 2 449 2.0E-44 T 28-03-2018 IPR000849 Sugar phosphate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS20080 a903d6b1a5cc1d676ec8073768602ad1 452 Gene3D G3DSA:1.20.1250.20 11 217 8.5E-37 T 28-03-2018 CI104_RS20080 a903d6b1a5cc1d676ec8073768602ad1 452 TIGRFAM TIGR00893 2A0114: D-galactonate transporter 27 436 1.2E-162 T 28-03-2018 IPR004744 D-galactonate transporter GO:0005215|GO:0006810|GO:0016021 CI104_RS05545 b3a2ca5123fa58a42ef7ecfe24ab9e22 331 Pfam PF06996 Type VI secretion, TssG 11 309 6.0E-91 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CI104_RS05545 b3a2ca5123fa58a42ef7ecfe24ab9e22 331 TIGRFAM TIGR03347 VI_chp_1: type VI secretion protein, VC_A0111 family 12 308 4.5E-100 T 28-03-2018 IPR010732 Type VI secretion, TssG-like CI104_RS05910 67a2a992d056cd27fd8a3a0c81e8bde4 77 Pfam PF02604 Antitoxin Phd_YefM, type II toxin-antitoxin system 19 64 3.0E-6 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CI104_RS05910 67a2a992d056cd27fd8a3a0c81e8bde4 77 Gene3D G3DSA:3.40.1620.10 1 57 0.0023 T 28-03-2018 CI104_RS05910 67a2a992d056cd27fd8a3a0c81e8bde4 77 SUPERFAMILY SSF143120 1 70 1.29E-9 T 28-03-2018 IPR006442 Type II toxin-antitoxin system, antitoxin Phd/YefM CI104_RS11175 d2fb281155105436887dd939b14f4c6d 84 Gene3D G3DSA:3.15.30.10 1 84 1.2E-18 T 28-03-2018 CI104_RS11175 d2fb281155105436887dd939b14f4c6d 84 Pfam PF03864 Phage major capsid protein E 4 82 8.9E-14 T 28-03-2018 IPR005564 Major capsid protein GpE GO:0019028 CI104_RS06510 33eb35c0dafcaee9532b3a2c7b2627fb 129 Gene3D G3DSA:1.10.10.10 28 129 1.1E-30 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS06510 33eb35c0dafcaee9532b3a2c7b2627fb 129 TIGRFAM TIGR00589 ogt: methylated-DNA--[protein]-cysteine S-methyltransferase 33 99 1.6E-14 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS06510 33eb35c0dafcaee9532b3a2c7b2627fb 129 SUPERFAMILY SSF46767 31 113 1.44E-25 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS06510 33eb35c0dafcaee9532b3a2c7b2627fb 129 Pfam PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain 33 112 2.2E-25 T 28-03-2018 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding GO:0003824|GO:0006281 Reactome: R-HSA-5657655 CI104_RS00345 b668eb51387e2ebd04063689633928ab 336 Pfam PF00248 Aldo/keto reductase family 10 323 8.5E-48 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS00345 b668eb51387e2ebd04063689633928ab 336 SUPERFAMILY SSF51430 10 323 1.31E-61 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS00345 b668eb51387e2ebd04063689633928ab 336 Gene3D G3DSA:3.20.20.100 4 325 9.7E-58 T 28-03-2018 IPR023210 NADP-dependent oxidoreductase domain CI104_RS15395 278d777f585d3b311332f5fc327237dd 272 Pfam PF01904 Protein of unknown function DUF72 21 248 8.1E-51 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CI104_RS15395 278d777f585d3b311332f5fc327237dd 272 SUPERFAMILY SSF117396 1 252 1.57E-63 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CI104_RS15395 278d777f585d3b311332f5fc327237dd 272 Gene3D G3DSA:3.20.20.410 1 256 1.7E-60 T 28-03-2018 IPR002763 Protein of unknown function DUF72 CI104_RS20645 fb397fe256c48ddfc2f313b470abe94d 176 Gene3D G3DSA:2.60.40.1090 25 176 1.1E-36 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20645 fb397fe256c48ddfc2f313b470abe94d 176 SUPERFAMILY SSF49401 33 176 2.54E-34 T 28-03-2018 IPR008966 Adhesion domain CI104_RS20645 fb397fe256c48ddfc2f313b470abe94d 176 Pfam PF00419 Fimbrial protein 28 176 3.0E-19 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS10725 905bbafb714f2cd18abc721ad0e0cfd7 217 Gene3D G3DSA:1.20.1170.10 33 217 3.6E-5 T 28-03-2018 CI104_RS12000 d227eac09e241fa47fb28139c3273d97 60 Gene3D G3DSA:2.10.70.10 24 60 2.0E-16 T 28-03-2018 CI104_RS12000 d227eac09e241fa47fb28139c3273d97 60 Pfam PF10636 Hemin uptake protein hemP 25 60 5.8E-16 T 28-03-2018 IPR019600 Hemin uptake protein HemP CI104_RS21325 1c67feae2a89e978d9ac6a871bb3d3f5 163 Pfam PF10696 Protein of unknown function (DUF2501) 83 161 5.5E-27 T 28-03-2018 IPR019637 Protein of unknown function DUF2501 CI104_RS25415 f09c92cd628b4b0a1708f8e7ab340bd6 170 SUPERFAMILY SSF51306 31 170 2.2E-21 T 28-03-2018 IPR015927 Peptidase S24/S26A/S26B/S26C CI104_RS25415 f09c92cd628b4b0a1708f8e7ab340bd6 170 Pfam PF10502 Signal peptidase, peptidase S26 47 168 2.8E-12 T 28-03-2018 IPR019533 Peptidase S26 CI104_RS25415 f09c92cd628b4b0a1708f8e7ab340bd6 170 Gene3D G3DSA:2.10.109.10 28 170 4.4E-15 T 28-03-2018 CI104_RS25415 f09c92cd628b4b0a1708f8e7ab340bd6 170 TIGRFAM TIGR02227 sigpep_I_bact: signal peptidase I 52 169 1.1E-14 T 28-03-2018 IPR000223 Peptidase S26A, signal peptidase I GO:0006508|GO:0008236|GO:0016020 CI104_RS02955 7769773da375f0e3096a9ccc14b6d2a7 167 Pfam PF13508 Acetyltransferase (GNAT) domain 45 123 1.0E-10 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS02955 7769773da375f0e3096a9ccc14b6d2a7 167 Gene3D G3DSA:3.40.630.30 3 157 9.7E-20 T 28-03-2018 CI104_RS02955 7769773da375f0e3096a9ccc14b6d2a7 167 SUPERFAMILY SSF55729 1 160 2.53E-25 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS25950 7fc72132fea44654be06c1d9f6fac890 394 SUPERFAMILY SSF109709 149 230 3.14E-11 T 28-03-2018 CI104_RS26600 64085292064006297e9baf63dc987199 141 Pfam PF03203 MerC mercury resistance protein 10 121 8.3E-19 T 28-03-2018 IPR004891 MerC mercury resistance protein CI104_RS26600 64085292064006297e9baf63dc987199 141 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 141 1.0E-55 T 28-03-2018 IPR004891 MerC mercury resistance protein CI104_RS12665 d74e71af157bb221aa087f96adf49114 417 Gene3D G3DSA:1.20.1250.20 32 224 2.3E-33 T 28-03-2018 CI104_RS12665 d74e71af157bb221aa087f96adf49114 417 SUPERFAMILY SSF103473 25 413 5.23E-62 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS12665 d74e71af157bb221aa087f96adf49114 417 ProSitePatterns PS00216 Sugar transport proteins signature 1. 91 107 - T 28-03-2018 IPR005829 Sugar transporter, conserved site GO:0005215|GO:0016021|GO:0055085 CI104_RS12665 d74e71af157bb221aa087f96adf49114 417 Gene3D G3DSA:1.20.1250.20 232 415 4.3E-15 T 28-03-2018 CI104_RS12665 d74e71af157bb221aa087f96adf49114 417 Pfam PF07690 Major Facilitator Superfamily 41 260 4.5E-27 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS19270 9de71516907a6388a5b6f383c329818e 226 Pfam PF11726 Inovirus Gp2 37 222 3.7E-45 T 28-03-2018 CI104_RS13035 b5d850af18f63393bba1ccb6d62869a5 1763 Gene3D G3DSA:1.20.1170.10 767 1176 0.15 T 28-03-2018 CI104_RS13035 b5d850af18f63393bba1ccb6d62869a5 1763 Gene3D G3DSA:3.90.20.10 1177 1333 4.7E-4 T 28-03-2018 CI104_RS12845 262bdb4eca74d48253c0f38106b5a04c 357 TIGRFAM TIGR03408 urea_trans_UrtC: urea ABC transporter, permease protein UrtC 42 351 2.3E-127 T 28-03-2018 IPR017778 ABC transporter, urea, permease protein, UrtC CI104_RS12845 262bdb4eca74d48253c0f38106b5a04c 357 Gene3D G3DSA:1.10.3470.10 9 354 6.5E-27 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS12845 262bdb4eca74d48253c0f38106b5a04c 357 Pfam PF02653 Branched-chain amino acid transport system / permease component 50 340 3.3E-42 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS04625 1b766e97b8cc8db95bee19434381c901 129 ProDom PD081346 TRANSCRIPTIONAL CAIF OPERON REGULATOR CAI ACTIVATOR TRANSCRIPTION ACTIVATORY FIX REGULATION 1 129 3.0E-55 T 28-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 CI104_RS04625 1b766e97b8cc8db95bee19434381c901 129 Pfam PF07180 CaiF/GrlA transcriptional regulator 4 64 1.2E-6 T 28-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 CI104_RS23695 2959b17d558f1fa66de7ceb9ea77ed9f 223 Pfam PF04493 Endonuclease V 12 206 2.0E-72 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CI104_RS23695 2959b17d558f1fa66de7ceb9ea77ed9f 223 Hamap MF_00801 Endonuclease V [nfi]. 2 216 35.005 T 28-03-2018 IPR007581 Endonuclease V GO:0004519|GO:0006281 CI104_RS04225 16d644803ab007f0a307451bcb912bf1 235 Pfam PF04231 Endonuclease I 57 229 3.9E-46 T 28-03-2018 IPR007346 Endonuclease I GO:0004518 CI104_RS04225 16d644803ab007f0a307451bcb912bf1 235 SUPERFAMILY SSF54060 24 230 7.18E-89 T 28-03-2018 CI104_RS09745 89bb4a74f77dd2a58b5ef346d751eacb 88 Pfam PF05488 PAAR motif 8 79 1.3E-21 T 28-03-2018 IPR008727 PAAR motif CI104_RS05325 3f103198cca1883f5d5038ab004ac87d 285 ProSitePatterns PS01315 Phosphatidate cytidylyltransferase signature. 239 265 - T 28-03-2018 IPR000374 Phosphatidate cytidylyltransferase GO:0016020|GO:0016772 KEGG: 00564+2.7.7.41|KEGG: 04070+2.7.7.41|MetaCyc: PWY-5667|MetaCyc: PWY-5981|MetaCyc: PWY-7817 CI104_RS05325 3f103198cca1883f5d5038ab004ac87d 285 Pfam PF01148 Cytidylyltransferase family 4 278 1.7E-70 T 28-03-2018 CI104_RS24220 34087e2b4604159c00633538aa88b2ac 166 PIRSF PIRSF034445 1 146 2.2E-30 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CI104_RS24220 34087e2b4604159c00633538aa88b2ac 166 Pfam PF07813 LTXXQ motif family protein 42 135 2.2E-22 T 28-03-2018 IPR012899 LTXXQ motif family protein GO:0042597 CI104_RS11100 ceab5c4860e93d10f0f1c52e9a3448ec 329 SMART SM00507 246 295 0.0015 T 28-03-2018 IPR003615 HNH nuclease CI104_RS11100 ceab5c4860e93d10f0f1c52e9a3448ec 329 Gene3D G3DSA:3.30.50.20 256 326 2.1E-15 T 28-03-2018 CI104_RS11100 ceab5c4860e93d10f0f1c52e9a3448ec 329 Pfam PF06147 Protein of unknown function (DUF968) 129 326 2.0E-86 T 28-03-2018 IPR010373 Protein of unknown function DUF968 CI104_RS28290 e69603fc3ed351623066f705ed3f1eee 128 Pfam PF05509 TraY domain 73 119 2.4E-21 T 28-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 CI104_RS28290 e69603fc3ed351623066f705ed3f1eee 128 Pfam PF05509 TraY domain 14 60 2.1E-13 T 28-03-2018 IPR008876 Relaxosome protein TraY GO:0000746|GO:0003677 CI104_RS08330 5fb3c9234641e00d0489c4fe38fb4402 234 Pfam PF01027 Inhibitor of apoptosis-promoting Bax1 19 230 2.8E-58 T 28-03-2018 IPR006214 Bax inhibitor 1-related CI104_RS14310 5ef4dab1367e13ef2534cf47d96742d1 302 Gene3D G3DSA:3.90.550.10 1 302 9.3E-60 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS14310 5ef4dab1367e13ef2534cf47d96742d1 302 TIGRFAM TIGR01099 galU: UTP--glucose-1-phosphate uridylyltransferase 8 275 2.4E-115 T 28-03-2018 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type GO:0003983|GO:0006011 KEGG: 00040+2.7.7.9|KEGG: 00052+2.7.7.9|KEGG: 00500+2.7.7.9|KEGG: 00520+2.7.7.9|MetaCyc: PWY-3801|MetaCyc: PWY-6527|MetaCyc: PWY-7238|MetaCyc: PWY-7343|MetaCyc: PWY-7817 CI104_RS14310 5ef4dab1367e13ef2534cf47d96742d1 302 Pfam PF00483 Nucleotidyl transferase 10 276 4.0E-25 T 28-03-2018 IPR005835 Nucleotidyl transferase domain GO:0009058|GO:0016779 CI104_RS14310 5ef4dab1367e13ef2534cf47d96742d1 302 SUPERFAMILY SSF53448 9 291 2.48E-62 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS08830 be6e09e52181a399f8caee494fe6381e 316 Pfam PF04393 Protein of unknown function (DUF535) 34 310 3.5E-100 T 28-03-2018 IPR007488 Protein of unknown function DUF535 CI104_RS15875 5b0c4c97af7b2723e9b75e5f39c63654 154 Pfam PF03748 Flagellar basal body-associated protein FliL 56 152 8.8E-20 T 28-03-2018 IPR005503 Flagellar basal body-associated protein FliL GO:0006935|GO:0009425|GO:0071973 CI104_RS15135 71cc8d43f816d9e9185b6f5aa00ab966 283 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 12 281 8.4E-113 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS15135 71cc8d43f816d9e9185b6f5aa00ab966 283 TIGRFAM TIGR00828 EIID-AGA: PTS system, mannose/fructose/sorbose family, IID component 11 281 5.1E-148 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS21630 e315421cd73e40d39afa1222cde773d3 130 Pfam PF14107 Domain of unknown function (DUF4280) 6 124 1.4E-31 T 28-03-2018 IPR025460 Protein of unknown function DUF4280 CI104_RS06615 90d89944abdb721e651064084698301e 183 Gene3D G3DSA:3.40.50.2020 4 180 8.2E-43 T 28-03-2018 CI104_RS06615 90d89944abdb721e651064084698301e 183 Pfam PF00156 Phosphoribosyl transferase domain 31 156 4.0E-16 T 28-03-2018 IPR000836 Phosphoribosyltransferase domain GO:0009116 CI104_RS06615 90d89944abdb721e651064084698301e 183 SUPERFAMILY SSF53271 13 180 1.24E-52 T 28-03-2018 IPR029057 Phosphoribosyltransferase-like CI104_RS06615 90d89944abdb721e651064084698301e 183 TIGRFAM TIGR01090 apt: adenine phosphoribosyltransferase 11 178 2.1E-73 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CI104_RS06615 90d89944abdb721e651064084698301e 183 Hamap MF_00004 Adenine phosphoribosyltransferase [apt]. 11 180 38.135 T 28-03-2018 IPR005764 Adenine phosphoribosyl transferase GO:0003999|GO:0005737|GO:0006168 KEGG: 00230+2.4.2.7|MetaCyc: PWY-6605|MetaCyc: PWY-6610|MetaCyc: PWY-7805|MetaCyc: PWY-7807|Reactome: R-HSA-6798695|Reactome: R-HSA-74217 CI104_RS20605 cd32eb3a84be70e385cdfdd219b1ff15 174 Gene3D G3DSA:1.10.3210.10 1 174 1.4E-25 T 28-03-2018 CI104_RS20605 cd32eb3a84be70e385cdfdd219b1ff15 174 SUPERFAMILY SSF109604 2 171 6.2E-38 T 28-03-2018 CI104_RS25310 deb012f7bedeedbedd0e04b4b5a716ef 262 Pfam PF05309 TraE protein 73 227 9.7E-23 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CI104_RS20660 177adb8040055fbdea3ef785e79035a7 473 SMART SM00052 220 462 6.1E-48 T 28-03-2018 IPR001633 EAL domain CI104_RS20660 177adb8040055fbdea3ef785e79035a7 473 Gene3D G3DSA:3.20.20.450 222 472 4.5E-48 T 28-03-2018 IPR001633 EAL domain CI104_RS20660 177adb8040055fbdea3ef785e79035a7 473 SUPERFAMILY SSF141868 226 468 8.37E-48 T 28-03-2018 IPR001633 EAL domain CI104_RS20660 177adb8040055fbdea3ef785e79035a7 473 Pfam PF00563 EAL domain 226 457 4.2E-46 T 28-03-2018 IPR001633 EAL domain CI104_RS11095 314321fd8aa7a031e95e8c1ac89fdf78 173 Gene3D G3DSA:1.10.490.10 13 170 3.1E-4 T 28-03-2018 CI104_RS14960 dc534568de89b23de711b74a1cdccb9b 173 Gene3D G3DSA:1.10.260.40 1 126 4.5E-11 T 28-03-2018 CI104_RS14960 dc534568de89b23de711b74a1cdccb9b 173 Pfam PF01381 Helix-turn-helix 31 73 4.1E-5 T 28-03-2018 IPR001387 Cro/C1-type helix-turn-helix domain GO:0043565 CI104_RS14960 dc534568de89b23de711b74a1cdccb9b 173 SUPERFAMILY SSF47413 7 78 3.1E-7 T 28-03-2018 IPR010982 Lambda repressor-like, DNA-binding domain GO:0003677 CI104_RS11610 d30aad2fe1b1ff85f1e6647779ecbd50 248 Gene3D G3DSA:2.40.160.20 8 248 3.8E-12 T 28-03-2018 IPR011250 Outer membrane protein/outer membrane enzyme PagP, beta-barrel GO:0016021 CI104_RS11610 d30aad2fe1b1ff85f1e6647779ecbd50 248 Pfam PF06629 MltA-interacting protein MipA 28 248 2.8E-52 T 28-03-2018 IPR010583 MltA-interacting MipA CI104_RS22765 0e4ee9380aafd779077f2d894b159860 167 Pfam PF00419 Fimbrial protein 33 167 2.0E-12 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS22765 0e4ee9380aafd779077f2d894b159860 167 SUPERFAMILY SSF49401 41 167 4.97E-19 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22765 0e4ee9380aafd779077f2d894b159860 167 Gene3D G3DSA:2.60.40.1090 29 167 3.8E-18 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS17275 3e73c0065a2ace5d340efc23fcea6c4f 251 SUPERFAMILY SSF46689 1 76 4.84E-14 T 28-03-2018 IPR009057 Homeobox domain-like GO:0003677 CI104_RS17275 3e73c0065a2ace5d340efc23fcea6c4f 251 Pfam PF01418 Helix-turn-helix domain, rpiR family 1 74 1.1E-15 T 28-03-2018 IPR000281 Helix-turn-helix protein RpiR GO:0003700|GO:0006355 CI104_RS17275 3e73c0065a2ace5d340efc23fcea6c4f 251 Gene3D G3DSA:1.10.10.10 1 142 5.8E-18 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS14745 0eec9f65d39c0b43f55ae2ef58553f48 197 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 81 196 7.4E-23 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CI104_RS24425 32bf59a143d1391df82a1e4647dd0662 128 Pfam PF01850 PIN domain 6 112 1.0E-17 T 28-03-2018 IPR002716 PIN domain CI104_RS24425 32bf59a143d1391df82a1e4647dd0662 128 Gene3D G3DSA:3.40.50.1010 1 126 2.3E-23 T 28-03-2018 IPR029060 PIN domain-like CI104_RS24425 32bf59a143d1391df82a1e4647dd0662 128 SUPERFAMILY SSF88723 3 120 3.36E-28 T 28-03-2018 IPR029060 PIN domain-like CI104_RS15345 00354f797664838ff9d2f01969285302 319 Gene3D G3DSA:3.40.50.1980 199 317 1.1E-25 T 28-03-2018 CI104_RS15345 00354f797664838ff9d2f01969285302 319 SUPERFAMILY SSF53807 32 317 5.89E-76 T 28-03-2018 CI104_RS15345 00354f797664838ff9d2f01969285302 319 Gene3D G3DSA:3.40.50.1980 32 198 2.2E-46 T 28-03-2018 CI104_RS15345 00354f797664838ff9d2f01969285302 319 Pfam PF01297 Zinc-uptake complex component A periplasmic 33 315 6.0E-58 T 28-03-2018 IPR006127 Periplasmic solute binding protein, ZnuA-like GO:0030001|GO:0046872 CI104_RS14510 5ee2f7eb89ba2b30111e5e846e578b28 92 Pfam PF10762 Protein of unknown function (DUF2583) 1 87 1.6E-47 T 28-03-2018 IPR019698 Protein of unknown function DUF2583 CI104_RS23375 96ef1862b531d147bcd158432eba7881 441 TIGRFAM TIGR00797 matE: MATE efflux family protein 17 410 8.8E-101 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS23375 96ef1862b531d147bcd158432eba7881 441 PIRSF PIRSF006603 5 439 2.2E-49 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS23375 96ef1862b531d147bcd158432eba7881 441 Pfam PF01554 MatE 17 177 3.7E-33 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS23375 96ef1862b531d147bcd158432eba7881 441 Pfam PF01554 MatE 241 381 2.4E-11 T 28-03-2018 IPR002528 Multi antimicrobial extrusion protein GO:0006855|GO:0015238|GO:0015297|GO:0016020|GO:0055085 Reactome: R-HSA-425366 CI104_RS25940 886cd9ff580514e958f9525e80efa4bd 314 Pfam PF17438 Family of unknown function (DUF5417) 1 91 3.1E-58 T 28-03-2018 IPR035392 Protein of unknown function DUF5417 CI104_RS25940 886cd9ff580514e958f9525e80efa4bd 314 ProDom PD750413 FRD.1 PLASMID FRD-GP32 1 91 3.0E-50 T 28-03-2018 IPR035392 Protein of unknown function DUF5417 CI104_RS14835 407811e990a520e73ff8a9036391e036 318 Pfam PF10123 Mu-like prophage I protein 29 311 1.7E-51 T 28-03-2018 IPR012106 Protease, Mu phage/prophage I type CI104_RS14835 407811e990a520e73ff8a9036391e036 318 PIRSF PIRSF016624 143 318 1.1E-6 T 28-03-2018 IPR012106 Protease, Mu phage/prophage I type CI104_RS14835 407811e990a520e73ff8a9036391e036 318 PIRSF PIRSF016624 1 148 1.8E-19 T 28-03-2018 IPR012106 Protease, Mu phage/prophage I type CI104_RS08010 3c1dec397bfc1383a1a7fa64d85833f4 456 Pfam PF07287 Acyclic terpene utilisation family protein AtuA 62 310 3.4E-19 T 28-03-2018 IPR010839 Acyclic terpene utilisation CI104_RS11845 9135924dafe3b990b57b803be90b072e 115 PIRSF PIRSF000699 10 115 1.4E-40 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS11845 9135924dafe3b990b57b803be90b072e 115 Gene3D G3DSA:1.20.58.80 15 113 5.9E-35 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS11845 9135924dafe3b990b57b803be90b072e 115 SUPERFAMILY SSF46973 14 113 2.62E-34 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS11845 9135924dafe3b990b57b803be90b072e 115 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 19 112 2.1E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS02190 9fdeb3c8d41bfb654fb479c07088dfe4 72 Pfam PF03889 Domain of unknown function 9 45 7.9E-22 T 28-03-2018 IPR005589 Protein of unknown function DUF331 CI104_RS11980 76d65ae440188ea6e1d17c93a8289575 249 Gene3D G3DSA:3.40.50.300 6 235 1.3E-45 T 28-03-2018 CI104_RS11980 76d65ae440188ea6e1d17c93a8289575 249 SUPERFAMILY SSF52540 13 225 2.36E-47 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS11980 76d65ae440188ea6e1d17c93a8289575 249 ProSitePatterns PS00211 ABC transporters family signature. 127 141 - T 28-03-2018 IPR017871 ABC transporter, conserved site GO:0005524|GO:0016887 CI104_RS11980 76d65ae440188ea6e1d17c93a8289575 249 Pfam PF00005 ABC transporter 22 162 9.6E-22 T 28-03-2018 IPR003439 ABC transporter-like GO:0005524|GO:0016887 CI104_RS11980 76d65ae440188ea6e1d17c93a8289575 249 SMART SM00382 25 210 4.7E-10 T 28-03-2018 IPR003593 AAA+ ATPase domain CI104_RS11980 76d65ae440188ea6e1d17c93a8289575 249 Hamap MF_01005 Vitamin B12 import ATP-binding protein BtuD [btuD]. 4 248 45.003 T 28-03-2018 IPR023693 ABC transporter, vitamin B12, BtuD GO:0005524|GO:0015889|GO:0016887 CI104_RS03180 391f6bde123120dea5c3b824b674f2ed 437 Pfam PF03313 Serine dehydratase alpha chain 193 429 2.7E-46 T 28-03-2018 IPR005130 Serine dehydratase-like, alpha subunit CI104_RS03180 391f6bde123120dea5c3b824b674f2ed 437 PIRSF PIRSF006054 5 436 1.1E-169 T 28-03-2018 IPR021144 Uncharacterised protein family UPF0597 CI104_RS03180 391f6bde123120dea5c3b824b674f2ed 437 Hamap MF_01845 UPF0597 protein YhaM [yhaM]. 9 434 34.166 T 28-03-2018 IPR021144 Uncharacterised protein family UPF0597 CI104_RS23505 eb27c5ff8b6da0a9f8f8bf078f97577c 528 Gene3D G3DSA:3.40.50.2300 1 226 8.2E-6 T 28-03-2018 CI104_RS06260 ae2a28790ebdf7e2b9979fdfd37efb1c 179 Gene3D G3DSA:2.60.40.1620 43 175 7.7E-56 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 CI104_RS06260 ae2a28790ebdf7e2b9979fdfd37efb1c 179 Pfam PF11622 Protein of unknown function (DUF3251) 20 178 5.2E-79 T 28-03-2018 IPR021658 Domain of unknown function DUF3251 CI104_RS15190 42551dda70dc44d7fc8e1174c2d7c20d 79 Pfam PF13996 YobH-like protein 2 71 4.6E-39 T 28-03-2018 IPR025611 YobH-like protein CI104_RS15580 4cf059266123ee322da9edcab5f9d93e 330 Pfam PF02653 Branched-chain amino acid transport system / permease component 60 317 5.3E-45 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS15580 4cf059266123ee322da9edcab5f9d93e 330 Gene3D G3DSA:1.10.3470.10 42 323 7.3E-34 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS11245 c272cb0c6db8d4a8afe07acc7c1b2323 169 Pfam PF07471 Phage DNA packaging protein Nu1 7 148 9.3E-24 T 28-03-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit CI104_RS22670 91267d1c00853e8d917ceaa5ea30ddf5 288 Pfam PF15922 YjeJ-like 1 281 1.3E-137 T 28-03-2018 IPR031810 YjeJ-like CI104_RS26775 1d0628d5fa37103ec92bea7a5fb084be 378 Pfam PF13020 Domain of unknown function (DUF3883) 256 352 7.4E-21 T 28-03-2018 IPR024975 Domain of unknown function DUF3883 CI104_RS09220 ac10b7899a419e14e22218ef1415ea80 546 Pfam PF02470 MlaD protein 42 133 1.5E-9 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS09220 ac10b7899a419e14e22218ef1415ea80 546 Pfam PF02470 MlaD protein 286 389 9.4E-13 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS09220 ac10b7899a419e14e22218ef1415ea80 546 Pfam PF02470 MlaD protein 157 222 1.9E-8 T 28-03-2018 IPR003399 Mce/MlaD CI104_RS09220 ac10b7899a419e14e22218ef1415ea80 546 Gene3D G3DSA:1.20.120.570 402 535 1.2E-4 T 28-03-2018 CI104_RS21730 d69ed02ff3f070d044ceba922ea4393a 123 Pfam PF06755 CbtA_toxin of type IV toxin-antitoxin system 1 112 7.4E-52 T 28-03-2018 IPR009610 CbtA toxin of type IV toxin-antitoxin system CI104_RS27770 ef45ad6129a803f40d4ed6f9c62e93e9 247 TIGRFAM TIGR02756 TraK_Ftype: type-F conjugative transfer system secretin TraK 12 237 1.6E-59 T 28-03-2018 IPR014126 Type-F conjugative transfer system secretin TraK CI104_RS27770 ef45ad6129a803f40d4ed6f9c62e93e9 247 Pfam PF06586 TraK protein 19 235 1.5E-43 T 28-03-2018 IPR010563 Pilus assembly TraK CI104_RS11535 3466793a2483433ae6dc93d87e94ce88 82 Pfam PF04226 Transglycosylase associated protein 33 81 1.8E-17 T 28-03-2018 IPR007341 Transglycosylase-associated protein GO:0016021 CI104_RS18520 7c7ebc6113ca2e27bcb3351634a1629e 353 Pfam PF10979 Protein of unknown function (DUF2786) 8 45 5.5E-9 T 28-03-2018 IPR024498 Domain of unknown function DUF2786 CI104_RS18520 7c7ebc6113ca2e27bcb3351634a1629e 353 Gene3D G3DSA:2.130.10.10 9 317 1.1E-4 T 28-03-2018 IPR015943 WD40/YVTN repeat-like-containing domain GO:0005515 CI104_RS26355 eb21e180cd8daf011d6d91d94558cba8 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 1.9E-22 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CI104_RS03220 8c5b1293fc89b508c3db8a02c51f6780 134 Pfam PF07332 Putative Actinobacterial Holin-X, holin superfamily III 19 127 1.8E-22 T 28-03-2018 IPR009937 Putative Actinobacterial Holin-X, holin superfamily III CI104_RS24720 e6549ab31d4b05f6123a98e6a5b75546 269 Gene3D G3DSA:3.40.50.1820 26 265 2.4E-43 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS24720 e6549ab31d4b05f6123a98e6a5b75546 269 Pfam PF01738 Dienelactone hydrolase family 42 265 7.9E-78 T 28-03-2018 IPR002925 Dienelactone hydrolase GO:0016787 CI104_RS24720 e6549ab31d4b05f6123a98e6a5b75546 269 SUPERFAMILY SSF53474 34 264 2.05E-48 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS00065 87993b2e1f55fc1b8f383742856bf6bc 110 Pfam PF07119 Protein of unknown function (DUF1375) 15 77 1.4E-12 T 28-03-2018 IPR010780 Protein of unknown function DUF1375 CI104_RS25905 2ee5b9972217c69447d20b9e5c75e32e 79 Pfam PF04221 RelB antitoxin 1 78 4.2E-28 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CI104_RS25905 2ee5b9972217c69447d20b9e5c75e32e 79 TIGRFAM TIGR02384 RelB_DinJ: addiction module antitoxin, RelB/DinJ family 3 79 1.5E-22 T 28-03-2018 IPR007337 RelB antitoxin/Antitoxin DinJ CI104_RS25905 2ee5b9972217c69447d20b9e5c75e32e 79 Gene3D G3DSA:1.10.1220.10 3 42 3.7E-4 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS06375 77ac46351e9595f2d9a4d313086c435b 109 Pfam PF03626 Prokaryotic Cytochrome C oxidase subunit IV 20 92 5.9E-19 T 28-03-2018 IPR005171 Cytochrome C oxidase subunit IV, prokaryotes GO:0016021 CI104_RS06375 77ac46351e9595f2d9a4d313086c435b 109 TIGRFAM TIGR02847 CyoD: cytochrome o ubiquinol oxidase subunit IV 12 107 2.6E-38 T 28-03-2018 IPR014210 Cytochrome o ubiquinol oxidase subunit IV GO:0008827|GO:0015990|GO:0016021 CI104_RS24810 491557f5f898e6b7aaf5a30575feaf55 67 Pfam PF13627 Prokaryotic lipoprotein-attachment site 8 29 2.9E-9 T 28-03-2018 IPR032831 Prokaryotic lipoprotein-attachment site CI104_RS27370 8115b825f35265510df96bb27800eff5 100 SUPERFAMILY SSF53738 2 81 5.1E-22 T 28-03-2018 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS27370 8115b825f35265510df96bb27800eff5 100 Pfam PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I 3 81 1.1E-22 T 28-03-2018 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I GO:0005975|GO:0016868 KEGG: 00520+5.4.2.10|MetaCyc: PWY-6749 CI104_RS27370 8115b825f35265510df96bb27800eff5 100 Gene3D G3DSA:3.40.120.10 2 84 7.4E-24 T 28-03-2018 CI104_RS14875 63e3584283c15ad8d8c5d407570a9230 101 ProDom PD283729 GP25 PHAGE SO2675 MEMBRANE MU-LIKE TRANSMEMBRANE HI1498 ECS4966 30 95 2.0E-16 T 28-03-2018 IPR020269 Bacteriophage Mu, Gp25 CI104_RS14875 63e3584283c15ad8d8c5d407570a9230 101 Pfam PF10805 Protein of unknown function (DUF2730) 4 98 2.9E-29 T 28-03-2018 IPR020269 Bacteriophage Mu, Gp25 CI104_RS10285 a40595e0cf757cbb0676fc57105658f6 386 Hamap MF_01066 Glucans biosynthesis protein C [mdoC]. 2 375 38.345 T 28-03-2018 IPR023723 Glucan biosynthesis protein C GO:0016741 CI104_RS10285 a40595e0cf757cbb0676fc57105658f6 386 Pfam PF01757 Acyltransferase family 10 357 5.0E-34 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CI104_RS14470 0c9565fc2ef9b2fa300f48fc5ac911bf 163 Gene3D G3DSA:3.40.630.30 1 163 1.2E-20 T 28-03-2018 CI104_RS14470 0c9565fc2ef9b2fa300f48fc5ac911bf 163 Pfam PF00583 Acetyltransferase (GNAT) family 26 136 1.2E-11 T 28-03-2018 IPR000182 GNAT domain GO:0008080 CI104_RS14470 0c9565fc2ef9b2fa300f48fc5ac911bf 163 SUPERFAMILY SSF55729 2 150 1.64E-20 T 28-03-2018 IPR016181 Acyl-CoA N-acyltransferase CI104_RS27195 a82fbec94dcdfdd8afb178e6e5048d7b 492 Pfam PF00916 Sulfate permease family 142 349 1.7E-29 T 28-03-2018 IPR011547 SLC26A/SulP transporter domain GO:0008272|GO:0015116|GO:0016021 CI104_RS27195 a82fbec94dcdfdd8afb178e6e5048d7b 492 Pfam PF01740 STAS domain 399 483 2.0E-10 T 28-03-2018 IPR002645 STAS domain CI104_RS27195 a82fbec94dcdfdd8afb178e6e5048d7b 492 SUPERFAMILY SSF52091 392 481 1.04E-12 T 28-03-2018 IPR002645 STAS domain CI104_RS27195 a82fbec94dcdfdd8afb178e6e5048d7b 492 Gene3D G3DSA:3.30.750.24 389 480 1.7E-14 T 28-03-2018 IPR002645 STAS domain CI104_RS18200 7e53790ba9b35ada1bfb7038126312d4 191 Gene3D G3DSA:2.60.460.10 31 190 1.5E-68 T 28-03-2018 CI104_RS18200 7e53790ba9b35ada1bfb7038126312d4 191 Pfam PF06572 Protein of unknown function (DUF1131) 24 191 7.0E-82 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 CI104_RS18200 7e53790ba9b35ada1bfb7038126312d4 191 ProDom PD105195 LIPOPROTEIN YFEY MEMBRANE OUTER PRECURSOR SIGNAL ESCHERICHIA ECS3303 EXPORTED Y1456 1 191 9.0E-94 T 28-03-2018 IPR010938 Protein of unknown function DUF1131 CI104_RS21880 4cfdbe11b269887571a1778907cfd634 1068 Gene3D G3DSA:3.40.50.300 55 324 2.5E-5 T 28-03-2018 CI104_RS10000 74aafad30d9293de0ae8e007750afc96 250 SUPERFAMILY SSF52540 20 220 6.0E-11 T 28-03-2018 IPR027417 P-loop containing nucleoside triphosphate hydrolase CI104_RS10000 74aafad30d9293de0ae8e007750afc96 250 Gene3D G3DSA:3.40.50.300 18 220 1.8E-15 T 28-03-2018 CI104_RS01765 43dbf426b99692edb7d7d7949ac6867a 259 SUPERFAMILY SSF53067 44 164 7.77E-5 T 28-03-2018 CI104_RS10840 d66d2d1b4315f76a0f1956d4e5877f3a 170 Gene3D G3DSA:2.40.50.260 2 98 3.0E-5 T 28-03-2018 CI104_RS10840 d66d2d1b4315f76a0f1956d4e5877f3a 170 Pfam PF04717 Type VI secretion system, phage-baseplate injector 7 109 1.3E-18 T 28-03-2018 IPR006531 Gp5 N-terminal CI104_RS10840 d66d2d1b4315f76a0f1956d4e5877f3a 170 TIGRFAM TIGR01644 phage_P2_V: phage baseplate assembly protein V 1 170 2.1E-44 T 28-03-2018 IPR013046 Phage baseplate assembly protein V/Gp45 CI104_RS11580 9c46648088e042febba7a358ebc70b80 148 Hamap MF_01874 UPF0756 membrane protein YeaL [yeaL]. 3 148 18.572 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CI104_RS11580 9c46648088e042febba7a358ebc70b80 148 Pfam PF04284 Protein of unknown function (DUF441) 7 145 2.5E-45 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CI104_RS11580 9c46648088e042febba7a358ebc70b80 148 ProDom PD021096 MEMBRANE YEAL PRECURSOR SIGNAL PROTEIN TRANSMEMBRANE YTWI HI1074 INTEGRAL SPANNING 1 130 2.0E-30 T 28-03-2018 IPR007382 Uncharacterised protein family UPF0756, transmembrame CI104_RS24355 ed6df9d752164c813529431a2f679187 455 Pfam PF03611 PTS system sugar-specific permease component 12 406 1.9E-120 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CI104_RS09330 ff17742bb75114fae91cb5368035b31a 92 Pfam PF13986 Domain of unknown function (DUF4224) 5 48 1.9E-15 T 28-03-2018 IPR025319 Domain of unknown function DUF4224 CI104_RS17285 408386cc35a1a25820b931d0a60ef6e9 338 Pfam PF03612 Sorbitol phosphotransferase enzyme II N-terminus 4 190 3.1E-50 T 28-03-2018 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS17285 408386cc35a1a25820b931d0a60ef6e9 338 Pfam PF07663 Sorbitol phosphotransferase enzyme II C-terminus 245 337 4.3E-38 T 28-03-2018 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal GO:0008982|GO:0009401|GO:0016021 KEGG: 00051+2.7.1.198|KEGG: 00710+2.7.1.19|MetaCyc: PWY-5723 CI104_RS14915 cd8987918d4e388a66ff7f928c765881 175 Pfam PF06252 Protein of unknown function (DUF1018) 19 140 1.3E-29 T 28-03-2018 IPR009363 Bacteriophage Mu, Gp16 CI104_RS15130 97b3193f3dc0e67afc431b3636b7b6db 266 Pfam PF03609 PTS system sorbose-specific iic component 6 237 2.4E-75 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS15130 97b3193f3dc0e67afc431b3636b7b6db 266 TIGRFAM TIGR00822 EII-Sor: PTS system, mannose/fructose/sorbose family, IIC component 1 266 1.2E-128 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS20565 a4fc6a5a43ef938176c2685461e4622e 164 Pfam PF06496 Protein of unknown function (DUF1097) 9 152 1.1E-25 T 28-03-2018 IPR009476 Protein of unknown function DUF1097 CI104_RS13345 cbe630885f512765f174509e265aad4b 149 Pfam PF04657 Putative inner membrane exporter, YdcZ 6 143 6.4E-21 T 28-03-2018 IPR006750 Putative inner membrane exporter, YdcZ CI104_RS07170 d8bbcf9ffd1bf6424ed78200377d464a 85 Pfam PF06643 Protein of unknown function (DUF1158) 1 79 1.1E-46 T 28-03-2018 IPR010590 Protein of unknown function DUF1158 CI104_RS07170 d8bbcf9ffd1bf6424ed78200377d464a 85 ProDom PD027061 YBDJ MEMBRANE TRANSMEMBRANE INNER RAMA 3'REGION ECS0618 1 81 6.0E-21 T 28-03-2018 IPR010590 Protein of unknown function DUF1158 CI104_RS07815 18d12204e96850ff9c614c31f502b6b9 68 Pfam PF10725 Protein of unknown function (DUF2517) 4 63 1.1E-36 T 28-03-2018 IPR019663 Uncharacterised protein YbfA CI104_RS18000 0d40c648d6366a8cffae4086a1c5ffb8 108 Pfam PF10697 Protein of unknown function (DUF2502) 23 106 1.5E-19 T 28-03-2018 IPR019638 Protein of unknown function DUF2502 CI104_RS06365 a6bce7d9b04f2d0e52f3f58701a8b3b7 124 Pfam PF07377 Protein of unknown function (DUF1493) 7 114 2.0E-28 T 28-03-2018 IPR010862 Protein of unknown function DUF1493 CI104_RS07795 771c3f434217dc42f0f4e57a40034c3f 188 TIGRFAM TIGR00681 kdpC: K+-transporting ATPase, C subunit 3 188 2.0E-84 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CI104_RS07795 771c3f434217dc42f0f4e57a40034c3f 188 PIRSF PIRSF001296 1 188 4.5E-71 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CI104_RS07795 771c3f434217dc42f0f4e57a40034c3f 188 Pfam PF02669 K+-transporting ATPase, c chain 8 187 4.7E-64 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CI104_RS07795 771c3f434217dc42f0f4e57a40034c3f 188 Hamap MF_00276 Potassium-transporting ATPase KdpC subunit [kdpC]. 1 188 31.172 T 28-03-2018 IPR003820 Potassium-transporting ATPase C chain GO:0006813|GO:0008556|GO:0016021 CI104_RS26645 6f70e6ffb52d027c9ab6a30270218cf1 334 Pfam PF02371 Transposase IS116/IS110/IS902 family 210 285 1.6E-19 T 28-03-2018 IPR003346 Transposase, IS116/IS110/IS902 GO:0003677|GO:0004803|GO:0006313 CI104_RS26645 6f70e6ffb52d027c9ab6a30270218cf1 334 Pfam PF01548 Transposase 7 147 1.0E-18 T 28-03-2018 IPR002525 Transposase, IS111A/IS1328/IS1533, N-terminal GO:0003677|GO:0004803|GO:0006313 CI104_RS10190 9cb2af01b13ae67faa1ebee44e138e2d 277 Pfam PF03239 Iron permease FTR1 family 1 270 3.1E-75 T 28-03-2018 IPR004923 Iron permease FTR1/Fip1/EfeU GO:0005381|GO:0006827|GO:0016020|GO:0033573 CI104_RS10190 9cb2af01b13ae67faa1ebee44e138e2d 277 SUPERFAMILY SSF103473 5 259 2.75E-6 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS10190 9cb2af01b13ae67faa1ebee44e138e2d 277 TIGRFAM TIGR00145 TIGR00145: FTR1 family protein 1 272 5.1E-104 T 28-03-2018 IPR005217 Iron permease FTR1-like GO:0005381|GO:0005886|GO:0006827|GO:0033573 CI104_RS09380 825365489a052eaec7828888b3732d4f 238 Gene3D G3DSA:1.10.10.10 92 152 3.9E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS09380 825365489a052eaec7828888b3732d4f 238 Gene3D G3DSA:1.10.10.10 2 57 8.7E-5 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS16885 adf4513c65784a673d719374dd328962 385 Pfam PF04235 Protein of unknown function (DUF418) 215 374 6.9E-44 T 28-03-2018 IPR007349 Domain of unknown function DUF418 CI104_RS18690 5a3d52e3a260b9f77722deada89e93f3 280 Pfam PF01263 Aldose 1-epimerase 5 277 1.6E-20 T 28-03-2018 IPR008183 Aldose 1-/Glucose-6-phosphate 1-epimerase GO:0005975|GO:0016853 CI104_RS18690 5a3d52e3a260b9f77722deada89e93f3 280 Gene3D G3DSA:2.70.98.10 2 280 1.5E-40 T 28-03-2018 IPR014718 Glycoside hydrolase-type carbohydrate-binding GO:0030246 CI104_RS18690 5a3d52e3a260b9f77722deada89e93f3 280 SUPERFAMILY SSF74650 5 279 1.13E-40 T 28-03-2018 IPR011013 Galactose mutarotase-like domain GO:0003824|GO:0005975|GO:0030246 CI104_RS22700 60f0a4f105f6585f52273385d2092cd5 158 Pfam PF04186 FxsA cytoplasmic membrane protein 8 110 1.4E-33 T 28-03-2018 IPR007313 FxsA cytoplasmic membrane protein GO:0016020 CI104_RS11145 2d6523cf718efe6934ccbc7d6c5380c2 166 Pfam PF07471 Phage DNA packaging protein Nu1 68 145 1.8E-17 T 28-03-2018 IPR010906 Bacteriophage lambda, Nu1, terminase small subunit CI104_RS24875 67e30447f211762d55f0e4bcd5542786 450 Pfam PF06899 WzyE protein, O-antigen assembly polymerase 1 442 3.5E-262 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CI104_RS24875 67e30447f211762d55f0e4bcd5542786 450 Hamap MF_01003 Probable ECA polymerase [wzyE]. 1 448 41.938 T 28-03-2018 IPR010691 Probable ECA polymerase WzyE GO:0009246|GO:0016021 CI104_RS07755 9b68a22e08a1bfe56d3001d6024f1022 97 Pfam PF01402 Ribbon-helix-helix protein, copG family 52 88 2.4E-7 T 28-03-2018 IPR002145 Ribbon-helix-helix protein, CopG GO:0006355 CI104_RS07755 9b68a22e08a1bfe56d3001d6024f1022 97 Gene3D G3DSA:1.10.1220.10 50 90 1.2E-6 T 28-03-2018 IPR013321 Arc-type ribbon-helix-helix GO:0006355 CI104_RS27265 b7ad27e5c8293874e4d8721c90ddbf65 109 Pfam PF05973 Phage derived protein Gp49-like (DUF891) 14 99 1.9E-22 T 28-03-2018 IPR009241 Toxin HigB-like CI104_RS27265 b7ad27e5c8293874e4d8721c90ddbf65 109 Gene3D G3DSA:3.30.2310.20 1 84 0.0011 T 28-03-2018 CI104_RS19820 a18a404eebfea658e60332b14fa3dc08 307 Pfam PF00146 NADH dehydrogenase 10 301 8.6E-49 T 28-03-2018 IPR001694 NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS19820 a18a404eebfea658e60332b14fa3dc08 307 ProSitePatterns PS00668 Respiratory-chain NADH dehydrogenase subunit 1 signature 2. 194 207 - T 28-03-2018 IPR018086 NADH:ubiquinone oxidoreductase, subunit 1, conserved site GO:0016020|GO:0055114 Reactome: R-HSA-611105|Reactome: R-HSA-6799198 CI104_RS10135 e3958ec886e449c3817f002778fd9b36 255 Pfam PF01925 Sulfite exporter TauE/SafE 16 246 7.4E-27 T 28-03-2018 IPR002781 Transmembrane protein TauE-like GO:0016021 CI104_RS27140 d659a8378cf0970655b36a735280807c 387 SUPERFAMILY SSF109709 165 247 9.16E-10 T 28-03-2018 CI104_RS25095 fea670319ec3660b60581b4324c0d257 321 Gene3D G3DSA:1.10.3470.10 34 320 1.9E-37 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS25095 fea670319ec3660b60581b4324c0d257 321 Pfam PF02653 Branched-chain amino acid transport system / permease component 45 313 3.6E-50 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS04780 d5490cdde3e7d68c9445120bd0a65595 255 Pfam PF09335 SNARE associated Golgi protein 36 159 4.8E-19 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS07360 bdb10cb8f2c9148cfdfa186cc1c94263 65 Pfam PF04328 Selenoprotein, putative 5 65 2.0E-30 T 28-03-2018 IPR007423 Selenoprotein, putative CI104_RS08585 63fa6c375ff8d8904f60cec493a8a83a 306 Gene3D G3DSA:1.10.3720.10 2 293 1.5E-45 T 28-03-2018 CI104_RS08585 63fa6c375ff8d8904f60cec493a8a83a 306 SUPERFAMILY SSF161098 90 288 7.98E-22 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS08585 63fa6c375ff8d8904f60cec493a8a83a 306 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 113 304 1.5E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS09015 90d995095e8d8d633a6b8080d6761a0c 586 TIGRFAM TIGR00702 TIGR00702: YcaO-type kinase domain 11 404 4.0E-169 T 28-03-2018 IPR003776 YcaO-like domain CI104_RS09015 90d995095e8d8d633a6b8080d6761a0c 586 Pfam PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding 59 391 5.8E-80 T 28-03-2018 IPR003776 YcaO-like domain CI104_RS24990 a9678a9799ab52fd6281c7be6fae4240 233 PIRSF PIRSF028451 4 227 4.5E-31 T 28-03-2018 IPR015996 Uncharacterised conserved protein UCP028451 CI104_RS24990 a9678a9799ab52fd6281c7be6fae4240 233 TIGRFAM TIGR02453 TIGR02453: TIGR02453 family protein 10 222 4.8E-33 T 28-03-2018 IPR012808 Conserved hypothetical protein CHP02453 CI104_RS24990 a9678a9799ab52fd6281c7be6fae4240 233 Pfam PF09365 Conserved hypothetical protein (DUF2461) 13 218 1.1E-46 T 28-03-2018 IPR012808 Conserved hypothetical protein CHP02453 CI104_RS06690 31982c54970fd416a4f72a4b66091b61 264 Pfam PF01963 TraB family 30 264 3.5E-35 T 28-03-2018 IPR002816 Pheromone shutdown, TraB CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 Pfam PF01578 Cytochrome C assembly protein 8 184 3.4E-32 T 28-03-2018 IPR002541 Cytochrome c assembly protein GO:0017004|GO:0020037 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 TIGRFAM TIGR01191 ccmC: heme exporter protein CcmC 45 225 3.0E-84 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 156 182 6.1E-64 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 62 82 6.1E-64 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 100 120 6.1E-64 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 45 62 6.1E-64 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 201 225 6.1E-64 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS17135 1cdff4d448c49bf6ce58c9ee06c08c3c 245 PRINTS PR01386 Cytochrome c-type biogenesis protein CcmC signature 121 141 6.1E-64 T 28-03-2018 IPR003557 Cytochrome c-type biogenesis protein CcmC GO:0015232|GO:0015886|GO:0016020|GO:0017004 CI104_RS09570 bea52111711fdac8be85c41b10a0e412 466 Pfam PF07157 DNA circularisation protein N-terminus 25 117 2.4E-31 T 28-03-2018 IPR009826 DNA circulation, N-terminal CI104_RS09570 bea52111711fdac8be85c41b10a0e412 466 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 20 119 2.0E-33 T 28-03-2018 IPR009826 DNA circulation, N-terminal CI104_RS20595 de0ae532770659b91411095c25693aa5 183 SUPERFAMILY SSF46894 110 171 9.52E-5 T 28-03-2018 IPR016032 Signal transduction response regulator, C-terminal effector GO:0003677|GO:0006355 CI104_RS04505 97946cdd1a1db60aef51df8756e0614b 188 Pfam PF01184 GPR1/FUN34/yaaH family 4 176 3.3E-39 T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CI104_RS04505 97946cdd1a1db60aef51df8756e0614b 188 ProSitePatterns PS01114 GPR1/FUN34/yaaH family signature. 8 17 - T 28-03-2018 IPR000791 Acetate transporter GPR1/FUN34/SatP family GO:0016021 CI104_RS25580 823cdea27eb4f98399e18fb2cd94c933 120 Gene3D G3DSA:1.10.150.130 13 98 1.9E-11 T 28-03-2018 IPR023109 Integrase/recombinase, N-terminal CI104_RS25580 823cdea27eb4f98399e18fb2cd94c933 120 Pfam PF13495 Phage integrase, N-terminal SAM-like domain 17 98 3.6E-24 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS08955 36abf384fc9adb06125523caa3a30a79 208 Gene3D G3DSA:3.40.50.850 1 208 4.8E-44 T 28-03-2018 CI104_RS08955 36abf384fc9adb06125523caa3a30a79 208 SUPERFAMILY SSF52499 3 202 2.09E-54 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS08955 36abf384fc9adb06125523caa3a30a79 208 Pfam PF00857 Isochorismatase family 14 165 8.1E-22 T 28-03-2018 IPR000868 Isochorismatase-like GO:0003824|GO:0008152 CI104_RS10515 211eeaac246f953b67ca2ccd0477fe3b 57 Pfam PF01783 Ribosomal L32p protein family 2 57 1.9E-19 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS10515 211eeaac246f953b67ca2ccd0477fe3b 57 TIGRFAM TIGR01031 rpmF_bact: ribosomal protein bL32 2 55 1.2E-18 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS10515 211eeaac246f953b67ca2ccd0477fe3b 57 Hamap MF_00340 50S ribosomal protein L32 [rpmF]. 1 55 16.352 T 28-03-2018 IPR002677 Ribosomal protein L32p GO:0003735|GO:0006412|GO:0015934 Reactome: R-HSA-5368286|Reactome: R-HSA-5389840|Reactome: R-HSA-5419276 CI104_RS10515 211eeaac246f953b67ca2ccd0477fe3b 57 SUPERFAMILY SSF57829 2 55 1.53E-18 T 28-03-2018 IPR011332 Zinc-binding ribosomal protein GO:0006412 CI104_RS17095 853f90c0fd2a36117dfe1ddc06381fb0 315 Gene3D G3DSA:3.90.550.10 1 209 2.1E-28 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS17095 853f90c0fd2a36117dfe1ddc06381fb0 315 SUPERFAMILY SSF53448 1 232 5.53E-33 T 28-03-2018 IPR029044 Nucleotide-diphospho-sugar transferases CI104_RS17095 853f90c0fd2a36117dfe1ddc06381fb0 315 Pfam PF00535 Glycosyl transferase family 2 4 166 1.0E-28 T 28-03-2018 IPR001173 Glycosyltransferase 2-like Reactome: R-HSA-913709 CI104_RS01390 b6dba075fcce20aee8329e275f19621b 89 Pfam PF06611 Protein of unknown function (DUF1145) 1 58 1.8E-26 T 28-03-2018 IPR009525 Protein of unknown function DUF1145 CI104_RS27040 0b5913d2cca63be496813bf786df2aae 156 SUPERFAMILY SSF57938 27 65 4.32E-6 T 28-03-2018 IPR001305 Heat shock protein DnaJ, cysteine-rich domain GO:0031072|GO:0051082 CI104_RS27040 0b5913d2cca63be496813bf786df2aae 156 Gene3D G3DSA:2.10.230.10 16 47 0.015 T 28-03-2018 CI104_RS27040 0b5913d2cca63be496813bf786df2aae 156 Gene3D G3DSA:2.10.230.10 48 125 0.0053 T 28-03-2018 CI104_RS13585 e1dcdc942e5f3bae1bab7a02311406e3 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 82 4.3E-20 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CI104_RS20935 90e2c9b6aa304b602bc7cd386bff239c 255 SUPERFAMILY SSF53623 12 64 8.33E-8 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS20935 90e2c9b6aa304b602bc7cd386bff239c 255 TIGRFAM TIGR03172 TIGR03172: putative selenium-dependent hydroxylase accessory protein YqeC 21 245 2.2E-74 T 28-03-2018 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CI104_RS20935 90e2c9b6aa304b602bc7cd386bff239c 255 Gene3D G3DSA:3.40.1190.10 13 154 6.7E-9 T 28-03-2018 IPR013221 Mur ligase, central GO:0005524|GO:0009058 Reactome: R-HSA-196757 CI104_RS11555 6936113cc68c4b0bf712442a3c1daa80 115 Pfam PF04343 Protein of unknown function, DUF488 5 112 1.9E-32 T 28-03-2018 IPR007438 Protein of unknown function DUF488 CI104_RS14780 74181e5a796cd79f6cae05ac30d7def2 443 Pfam PF07157 DNA circularisation protein N-terminus 9 95 1.0E-25 T 28-03-2018 IPR009826 DNA circulation, N-terminal CI104_RS14780 74181e5a796cd79f6cae05ac30d7def2 443 ProDom PD332323 CIRCULATION DNA PROTEIN TAIL/DNA PHAGE PROPHAGE VIRION FLUMU BACTERIOPHAGE MU-LIKE 9 123 8.0E-48 T 28-03-2018 IPR009826 DNA circulation, N-terminal CI104_RS01640 3e6d978725d1c1bc443dffb7e9f4df22 434 TIGRFAM TIGR00784 citMHS: citrate transporter 1 432 6.0E-123 T 28-03-2018 IPR014738 Citrate transporter GO:0015137|GO:0015746 CI104_RS01640 3e6d978725d1c1bc443dffb7e9f4df22 434 Pfam PF03600 Citrate transporter 14 378 4.1E-42 T 28-03-2018 IPR004680 Citrate transporter-like domain GO:0016021|GO:0055085 Reactome: R-HSA-5662702 CI104_RS17750 fa3457653c9886ad71703c6578b621de 333 PIRSF PIRSF020588 1 333 6.0E-166 T 28-03-2018 IPR023597 Flagellar regulator Flk GO:0010468|GO:0031224 CI104_RS20695 e1204735613e1d313880d06b4a6c506d 337 Pfam PF00419 Fimbrial protein 198 337 1.2E-13 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20695 e1204735613e1d313880d06b4a6c506d 337 Gene3D G3DSA:2.60.40.1090 191 337 6.6E-28 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS20695 e1204735613e1d313880d06b4a6c506d 337 SUPERFAMILY SSF49401 202 337 2.49E-26 T 28-03-2018 IPR008966 Adhesion domain CI104_RS02785 77840b5ec86d6ab28656d37e36340a07 321 Pfam PF00892 EamA-like transporter family 7 142 1.2E-27 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS02785 77840b5ec86d6ab28656d37e36340a07 321 Pfam PF00892 EamA-like transporter family 159 291 2.3E-17 T 28-03-2018 IPR000620 EamA domain GO:0016020|GO:0016021 CI104_RS02785 77840b5ec86d6ab28656d37e36340a07 321 SUPERFAMILY SSF103481 41 143 1.83E-12 T 28-03-2018 CI104_RS21750 73cf5ae25d2b485c39cfd30f438cf94c 147 Pfam PF03230 Antirestriction protein 55 147 2.1E-34 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS21750 73cf5ae25d2b485c39cfd30f438cf94c 147 ProDom PD012854 PLASMID KLCA ANTIRESTRICTION YFJX YCIB ARDB STABLE YFEB Z1216 C0275 52 147 1.0E-36 T 28-03-2018 IPR004914 Antirestriction protein CI104_RS03580 38a4e214ba9731888c7b9975ad3246df 201 TIGRFAM TIGR01634 tail_P2_I: phage tail protein I 5 140 5.0E-56 T 28-03-2018 IPR006521 Tail protein I CI104_RS03580 38a4e214ba9731888c7b9975ad3246df 201 Pfam PF09684 Phage tail protein (Tail_P2_I) 5 140 1.2E-52 T 28-03-2018 IPR006521 Tail protein I CI104_RS11250 a8dd9779514291bc28e9f338177d8615 196 Pfam PF06805 Bacteriophage lambda tail assembly protein I 1 85 8.9E-8 T 28-03-2018 IPR010654 Bacteriophage lambda tail assembly I CI104_RS11250 a8dd9779514291bc28e9f338177d8615 196 Gene3D G3DSA:3.10.20.30 1 84 5.5E-4 T 28-03-2018 IPR012675 Beta-grasp domain CI104_RS00855 69de835cad6833b00bbdc376ff10d91f 101 Pfam PF13983 YsaB-like lipoprotein 27 101 1.9E-44 T 28-03-2018 IPR025728 YsaB-like lipoprotein CI104_RS14110 3141503591bfd12eb0a1f6f66ffe3a9a 83 Pfam PF10692 Protein of unknown function (DUF2498) 4 81 2.6E-42 T 28-03-2018 IPR019633 Protein of unknown function DUF2498 CI104_RS26285 aaf908c932e4b49013d89ccc9908e268 272 Pfam PF13708 Domain of unknown function (DUF4942) 73 260 5.0E-23 T 28-03-2018 IPR031339 Domain of unknown function DUF4942 CI104_RS14160 8f3ba9a850d79a12f47f9777a45eb23d 206 Gene3D G3DSA:3.90.870.10 1 206 8.3E-61 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS14160 8f3ba9a850d79a12f47f9777a45eb23d 206 SUPERFAMILY SSF55821 1 205 2.72E-66 T 28-03-2018 IPR017945 DHBP synthase RibB-like alpha/beta domain CI104_RS14160 8f3ba9a850d79a12f47f9777a45eb23d 206 Pfam PF01300 Telomere recombination 23 198 3.6E-46 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CI104_RS14160 8f3ba9a850d79a12f47f9777a45eb23d 206 TIGRFAM TIGR00057 TIGR00057: tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family 7 203 6.1E-79 T 28-03-2018 IPR006070 YrdC-like domain GO:0003725 CI104_RS24300 bee7f5337cfc81fc7280dae233dfd789 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 62 318 1.5E-45 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS24300 bee7f5337cfc81fc7280dae233dfd789 334 Gene3D G3DSA:1.10.3470.10 13 333 3.2E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS05405 193118d9ffd9d43400f975ed6aa2e968 181 SUPERFAMILY SSF52980 4 178 2.68E-68 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS05405 193118d9ffd9d43400f975ed6aa2e968 181 Gene3D G3DSA:3.10.640.10 2 177 1.1E-73 T 28-03-2018 CI104_RS05405 193118d9ffd9d43400f975ed6aa2e968 181 PIRSF PIRSF011484 1 180 4.2E-65 T 28-03-2018 IPR009822 YaeQ CI104_RS05405 193118d9ffd9d43400f975ed6aa2e968 181 SMART SM01322 1 176 1.8E-110 T 28-03-2018 IPR009822 YaeQ CI104_RS05405 193118d9ffd9d43400f975ed6aa2e968 181 Pfam PF07152 YaeQ protein 1 173 4.1E-71 T 28-03-2018 IPR009822 YaeQ CI104_RS04805 49ebb9351410cec4ef5b3cb98abeb26b 40 Pfam PF15894 Inhibitor of glucose uptake transporter SgrT 3 39 2.6E-12 T 28-03-2018 IPR031767 Inhibitor of glucose uptake transporter SgrT GO:0046325 CI104_RS03510 e4cff72f3e86fc523ad590fffaa68ac5 354 Pfam PF05125 Phage major capsid protein, P2 family 9 339 1.4E-146 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CI104_RS03510 e4cff72f3e86fc523ad590fffaa68ac5 354 TIGRFAM TIGR01551 major_capsid_P2: phage major capsid protein, P2 family 7 341 4.5E-98 T 28-03-2018 IPR006441 Bacteriophage P2, GpN, major capsid GO:0019028 CI104_RS26375 9c1bcf4f2badf612167748423c105644 276 TIGRFAM TIGR02821 fghA_ester_D: S-formylglutathione hydrolase 4 274 3.7E-124 T 28-03-2018 IPR014186 S-formylglutathione hydrolase GO:0018738|GO:0046294 KEGG: 00680+3.1.2.12|MetaCyc: PWY-1801|Reactome: R-HSA-156590 CI104_RS26375 9c1bcf4f2badf612167748423c105644 276 Gene3D G3DSA:3.40.50.1820 1 275 6.6E-41 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS26375 9c1bcf4f2badf612167748423c105644 276 SUPERFAMILY SSF53474 1 274 4.71E-88 T 28-03-2018 IPR029058 Alpha/Beta hydrolase fold CI104_RS26375 9c1bcf4f2badf612167748423c105644 276 Pfam PF00756 Putative esterase 21 266 1.3E-64 T 28-03-2018 IPR000801 Putative esterase Reactome: R-HSA-156590 CI104_RS17900 b37f06e37bf4d9290d2ede45a5d59575 254 SUPERFAMILY SSF161098 14 234 1.44E-43 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS17900 b37f06e37bf4d9290d2ede45a5d59575 254 Gene3D G3DSA:1.10.3720.10 2 254 8.3E-47 T 28-03-2018 CI104_RS17900 b37f06e37bf4d9290d2ede45a5d59575 254 Pfam PF00528 Binding-protein-dependent transport system inner membrane component 62 248 7.4E-24 T 28-03-2018 IPR000515 ABC transporter type 1, transmembrane domain MetI-like GO:0006810|GO:0016020 CI104_RS22775 a4dfc57e03a6bbd8e41de1aad4b95063 190 SUPERFAMILY SSF49401 41 190 1.59E-23 T 28-03-2018 IPR008966 Adhesion domain CI104_RS22775 a4dfc57e03a6bbd8e41de1aad4b95063 190 Gene3D G3DSA:2.60.40.1090 40 190 5.8E-16 T 28-03-2018 IPR000259 Fimbrial-type adhesion domain GO:0007155|GO:0009289 CI104_RS25390 9f963990aa8cfe0341a48db01b885722 307 Pfam PF13737 Transposase DDE domain 19 130 2.4E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS18095 af5025444285d4d760bf952c2e09c164 332 Pfam PF13593 SBF-like CPA transporter family (DUF4137) 8 316 5.3E-101 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CI104_RS18095 af5025444285d4d760bf952c2e09c164 332 PIRSF PIRSF026166 1 332 3.7E-134 T 28-03-2018 IPR016833 Putative sodium bile acid cotransporter CI104_RS16160 1eccd3cef5206b0ca38fb6588022abe7 210 Gene3D G3DSA:3.40.50.10230 3 210 6.5E-75 T 28-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CI104_RS16160 1eccd3cef5206b0ca38fb6588022abe7 210 SUPERFAMILY SSF63965 9 207 1.7E-63 T 28-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CI104_RS16160 1eccd3cef5206b0ca38fb6588022abe7 210 Pfam PF02570 Precorrin-8X methylmutase 10 204 6.4E-67 T 28-03-2018 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase GO:0009236|GO:0016993 CI104_RS17265 c003b10b765536ce2374991b340267e0 440 Pfam PF02667 Short chain fatty acid transporter 1 440 1.3E-225 T 28-03-2018 IPR006160 Short chain fatty acid transporter AtoE CI104_RS17265 c003b10b765536ce2374991b340267e0 440 TIGRFAM TIGR00366 TIGR00366: TIGR00366 family protein 4 428 1.1E-220 T 28-03-2018 IPR006161 Conserved hypothetical protein CHP00336 CI104_RS03265 066557e5cef63d107bcf74f3d326668a 184 Pfam PF10688 Bacterial inner membrane protein 5 163 4.7E-57 T 28-03-2018 IPR019629 Uncharacterised protein family HI1736/YgjV CI104_RS03265 066557e5cef63d107bcf74f3d326668a 184 PIRSF PIRSF011443 1 180 1.1E-72 T 28-03-2018 IPR026267 Inner membrane protein YgjV CI104_RS03575 44f106e3146072558af53bc314c8b772 302 Pfam PF04865 Baseplate J-like protein 118 261 2.8E-24 T 28-03-2018 IPR006949 Baseplate protein J-like CI104_RS03575 44f106e3146072558af53bc314c8b772 302 PIRSF PIRSF020481 1 302 2.7E-128 T 28-03-2018 IPR014507 Baseplate assembly protein J, predicted CI104_RS23045 82cd196820af51095f085a7f8534efc2 296 Pfam PF13990 YjcZ-like protein 21 289 7.6E-128 T 28-03-2018 IPR025599 YjcZ-like protein CI104_RS09535 e92d44111a046d16d8fa4e9c6cb8cacc 119 Gene3D G3DSA:2.40.10.180 6 119 2.1E-23 T 28-03-2018 CI104_RS18335 cd8a3e4f23ab9f726748d2b1e4bd3fb7 346 Pfam PF06674 Protein of unknown function (DUF1176) 25 346 1.1E-95 T 28-03-2018 IPR009560 Protein of unknown function DUF1176 CI104_RS19440 9a57e76215d425ac62f9490fa5474fc5 598 Pfam PF10592 AIPR protein 245 560 4.5E-77 T 28-03-2018 IPR018891 Abortive bacteriophage infection, resistance CI104_RS21560 c0b4ce45e83cf1c65478f8429ead032c 383 Pfam PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component 40 383 3.2E-79 T 28-03-2018 IPR010327 FldB/FldC dehydratase alpha/beta subunit CI104_RS24590 8052cf4957ceaca6d8f391ce4b9b329b 89 ProDom PD029038 YIHD CYTOPLASMIC ENZYME Y3814 GLYCOGEN YPO0013A HI0845 DIRECT ORF1 UNCHARACTERIZED 1 87 2.0E-44 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 CI104_RS24590 8052cf4957ceaca6d8f391ce4b9b329b 89 Pfam PF06288 Protein of unknown function (DUF1040) 1 86 1.4E-46 T 28-03-2018 IPR009383 Protein of unknown function DUF1040 CI104_RS14635 9e66513c2cf098c8f03fe1e4a2702114 510 Pfam PF04293 SpoVR like protein 19 450 4.0E-177 T 28-03-2018 IPR007390 Sporulation stage V, protein R CI104_RS06610 27339633e7fc47d02b324fce00aaab8c 125 PIRSF PIRSF016789 2 123 1.8E-48 T 28-03-2018 IPR007401 Protein of unknown function DUF454 CI104_RS06610 27339633e7fc47d02b324fce00aaab8c 125 Pfam PF04304 Protein of unknown function (DUF454) 3 116 2.9E-40 T 28-03-2018 IPR007401 Protein of unknown function DUF454 CI104_RS01035 db4e71ce443482601364a7334110c010 519 TIGRFAM TIGR03369 cellulose_bcsE: cellulose biosynthesis protein BcsE 156 471 5.6E-125 T 28-03-2018 IPR017745 Cellulose biosynthesis protein BcsE CI104_RS01035 db4e71ce443482601364a7334110c010 519 Pfam PF10995 GGDEF I-site like or GIL domain 161 470 2.1E-122 T 28-03-2018 IPR017745 Cellulose biosynthesis protein BcsE CI104_RS04190 92d1a2fe1a1cad415eb80b03236d7a9e 188 Pfam PF02325 YGGT family 10 78 2.5E-22 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 CI104_RS04190 92d1a2fe1a1cad415eb80b03236d7a9e 188 Pfam PF02325 YGGT family 104 167 1.6E-16 T 28-03-2018 IPR003425 CCB3/YggT GO:0016020 CI104_RS21255 88dc6bdd396bae693da98e2585a86146 78 Pfam PF07256 Protein of unknown function (DUF1435) 1 75 1.4E-34 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 CI104_RS21255 88dc6bdd396bae693da98e2585a86146 78 ProDom PD058594 MEMBRANE INNER C5447 MAJOR ECS5328 THE SUPERFAMILY PERMEASES STY4905 YJJZ 1 78 2.0E-22 T 28-03-2018 IPR009885 Protein of unknown function DUF1435 CI104_RS17090 669e121d262c75786d5b16454acb63e8 120 Pfam PF04138 GtrA-like protein 7 116 1.0E-13 T 28-03-2018 IPR007267 GtrA-like protein GO:0000271|GO:0006810|GO:0016021 CI104_RS17090 669e121d262c75786d5b16454acb63e8 120 PIRSF PIRSF006298 1 118 8.0E-54 T 28-03-2018 IPR016480 Glucose translocase, bactoprenol-linked CI104_RS23895 9b652fde63f59d5cfdbff20aa2c935e7 119 Pfam PF07226 Protein of unknown function (DUF1422) 3 114 6.4E-54 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 CI104_RS23895 9b652fde63f59d5cfdbff20aa2c935e7 119 ProDom PD076479 MEMBRANE INNER YIJD TRANSMEMBRANE Y0323 AAA SIMILAR A ACETYL-COENZYME VV0128 1 119 2.0E-60 T 28-03-2018 IPR009867 Protein of unknown function DUF1422 CI104_RS02025 106b6b3101112abe19cd43e2fc90fe59 64 Pfam PF04324 BFD-like [2Fe-2S] binding domain 2 51 7.1E-15 T 28-03-2018 IPR007419 BFD-like [2Fe-2S]-binding domain CI104_RS15085 c15cc81abcc37aff7eac414d310eedf9 114 ProSitePatterns PS01094 Uncharacterized protein family UPF0076 signature. 90 108 - T 28-03-2018 IPR019897 RidA, conserved site CI104_RS15085 c15cc81abcc37aff7eac414d310eedf9 114 Gene3D G3DSA:3.30.1330.40 2 114 1.1E-21 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS15085 c15cc81abcc37aff7eac414d310eedf9 114 SUPERFAMILY SSF55298 5 114 2.04E-27 T 28-03-2018 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CI104_RS15085 c15cc81abcc37aff7eac414d310eedf9 114 Pfam PF01042 Endoribonuclease L-PSP 5 114 4.0E-28 T 28-03-2018 IPR006175 YjgF/YER057c/UK114 family CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 SUPERFAMILY SSF103473 251 450 4.84E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 SUPERFAMILY SSF103473 9 195 4.84E-63 T 28-03-2018 IPR020846 Major facilitator superfamily domain CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 Gene3D G3DSA:1.20.1250.20 261 456 2.4E-24 T 28-03-2018 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 Gene3D G3DSA:1.20.1250.20 12 202 5.0E-28 T 28-03-2018 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 Pfam PF07690 Major Facilitator Superfamily 22 412 1.6E-49 T 28-03-2018 IPR011701 Major facilitator superfamily GO:0016021|GO:0055085 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 141 165 4.4E-9 T 28-03-2018 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 20 44 4.4E-9 T 28-03-2018 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 111 131 4.4E-9 T 28-03-2018 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 305 329 4.4E-9 T 28-03-2018 CI104_RS15200 4f92181dce01af7df2e55c09f52b69de 457 PRINTS PR01036 Tetracycline resistance protein TetB signature 403 422 4.4E-9 T 28-03-2018 CI104_RS25020 5887670060a214898739e21d4708f24a 32 Pfam PF08046 IlvGEDA operon leader peptide 1 32 1.4E-16 T 28-03-2018 IPR012567 IlvGEDA operon leader peptide GO:0009082 CI104_RS06835 415c63e010e851b90ec4905a5e191266 869 Pfam PF05840 Bacteriophage replication gene A protein (GPA) 188 497 2.6E-104 T 28-03-2018 IPR008766 Replication gene A protein GO:0006260 CI104_RS02985 0a5a56b9892167aab5fa9991683b1eeb 191 SMART SM00749 129 191 9.1E-7 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CI104_RS02985 0a5a56b9892167aab5fa9991683b1eeb 191 SMART SM00749 51 114 9.9E-12 T 28-03-2018 IPR014004 Transport-associated and nodulation domain, bacteria CI104_RS02985 0a5a56b9892167aab5fa9991683b1eeb 191 Pfam PF04972 BON domain 124 188 1.3E-17 T 28-03-2018 IPR007055 BON domain CI104_RS02985 0a5a56b9892167aab5fa9991683b1eeb 191 Pfam PF04972 BON domain 46 113 5.2E-14 T 28-03-2018 IPR007055 BON domain CI104_RS22875 f09f74be8c8dc6089d138dddd9c0a01f 65 Pfam PF15959 Domain of unknown function (DUF4762) 1 60 3.9E-28 T 28-03-2018 IPR031882 Protein of unknown function DUF4762 CI104_RS11230 3c78b589ceb030dbe0a6cd04cfbd1191 346 Pfam PF03864 Phage major capsid protein E 18 343 6.2E-52 T 28-03-2018 IPR005564 Major capsid protein GpE GO:0019028 CI104_RS11230 3c78b589ceb030dbe0a6cd04cfbd1191 346 Gene3D G3DSA:3.90.1690.10 13 346 4.6E-51 T 28-03-2018 CI104_RS05720 174576fe2e5f8c3d1aece4d3b095507a 255 Gene3D G3DSA:3.60.20.10 1 255 6.2E-45 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS05720 174576fe2e5f8c3d1aece4d3b095507a 255 Pfam PF13230 Glutamine amidotransferases class-II 1 252 2.7E-113 T 28-03-2018 IPR026869 Putative glutamine amidotransferase type 2 CI104_RS05720 174576fe2e5f8c3d1aece4d3b095507a 255 SUPERFAMILY SSF56235 2 253 2.8E-52 T 28-03-2018 IPR029055 Nucleophile aminohydrolases, N-terminal CI104_RS26460 018cf8c924e5929c816247536ff5ec93 231 Gene3D G3DSA:1.10.260.40 161 221 4.3E-5 T 28-03-2018 CI104_RS03375 9801dd58fdc5e5f165a486f41139fac3 183 Pfam PF03551 Transcriptional regulator PadR-like family 43 112 5.5E-16 T 28-03-2018 IPR005149 Transcription regulator PadR, N-terminal CI104_RS03375 9801dd58fdc5e5f165a486f41139fac3 183 SUPERFAMILY SSF46785 39 156 2.55E-21 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS03375 9801dd58fdc5e5f165a486f41139fac3 183 Gene3D G3DSA:1.10.10.10 23 155 1.7E-19 T 28-03-2018 IPR011991 Winged helix-turn-helix DNA-binding domain CI104_RS27990 8512d9e022995b9efdb7ae4a500f475f 115 Pfam PF05717 IS66 Orf2 like protein 9 106 1.3E-38 T 28-03-2018 IPR008878 Transposase IS66, Orf2 CI104_RS27900 5dd56c51604e99765cb594ca8a049d57 139 Pfam PF07128 Protein of unknown function (DUF1380) 1 137 1.1E-71 T 28-03-2018 IPR009811 Protein of unknown function DUF1380 CI104_RS18415 3e823e9bbacdfb9b65ef935231783816 354 Pfam PF01594 AI-2E family transporter 20 345 3.0E-83 T 28-03-2018 IPR002549 Transmembrane protein TqsA-like CI104_RS04600 a70e4557cdf9d97b7757a881fb8f9e35 581 Gene3D G3DSA:2.60.120.10 488 581 1.5E-20 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS04600 a70e4557cdf9d97b7757a881fb8f9e35 581 SUPERFAMILY SSF51182 229 465 3.89E-72 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS04600 a70e4557cdf9d97b7757a881fb8f9e35 581 SUPERFAMILY SSF51182 492 566 3.89E-72 T 28-03-2018 IPR011051 RmlC-like cupin domain CI104_RS04600 a70e4557cdf9d97b7757a881fb8f9e35 581 PIRSF PIRSF026713 2 581 5.9E-195 T 28-03-2018 IPR016847 Mannose-6-phosphate isomerase, Firmicutes, long form, predicted CI104_RS04600 a70e4557cdf9d97b7757a881fb8f9e35 581 Gene3D G3DSA:2.60.120.10 228 467 2.9E-43 T 28-03-2018 IPR014710 RmlC-like jelly roll fold CI104_RS23100 7efeb544a7ed7ca77ee2d29c6a80c17e 282 Pfam PF06007 Phosphonate metabolism protein PhnJ 7 278 1.3E-148 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS23100 7efeb544a7ed7ca77ee2d29c6a80c17e 282 PIRSF PIRSF011468 1 282 5.8E-168 T 28-03-2018 IPR010306 Alpha-D-ribose 1-methylphosphonate 5-phosphate C-P-lyase GO:0016829|GO:0019700|GO:0051539 KEGG: 00440+4.7.1.1|MetaCyc: PWY-7399|MetaCyc: PWY-7805|MetaCyc: PWY-7807 CI104_RS06050 3dc095c50bf458aec748dda8e8fc32c9 219 Pfam PF06904 Extensin-like protein C-terminus 46 219 1.3E-53 T 28-03-2018 IPR009683 Extensin-like, C-terminal CI104_RS28665 890ddcd5b4d5dfe70b29fcee870f3ab4 140 ProDom PD007347 MERC PLASMID MEMBRANE INNER UPTAKE MERCURY HGII RESISTANCE PRECURSOR TRANSMEMBRANE 21 139 2.0E-53 T 28-03-2018 IPR004891 MerC mercury resistance protein CI104_RS28665 890ddcd5b4d5dfe70b29fcee870f3ab4 140 Pfam PF03203 MerC mercury resistance protein 9 120 4.6E-20 T 28-03-2018 IPR004891 MerC mercury resistance protein CI104_RS14085 f820429f721308c9259907c1e76f7d98 196 TIGRFAM TIGR00505 ribA: GTP cyclohydrolase II 5 194 2.3E-94 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CI104_RS14085 f820429f721308c9259907c1e76f7d98 196 SUPERFAMILY SSF142695 3 173 1.7E-67 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CI104_RS14085 f820429f721308c9259907c1e76f7d98 196 Pfam PF00925 GTP cyclohydrolase II 5 170 4.1E-68 T 28-03-2018 IPR032677 GTP cyclohydrolase II KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CI104_RS14085 f820429f721308c9259907c1e76f7d98 196 Hamap MF_00179 GTP cyclohydrolase-2 [ribA]. 1 196 48.798 T 28-03-2018 IPR000926 GTP cyclohydrolase II, RibA GO:0003935|GO:0009231 KEGG: 00740+3.5.4.25|MetaCyc: PWY-6168|MetaCyc: PWY-7539 CI104_RS09555 ec9320f470d59d925f58c84472794868 123 Pfam PF10618 Phage tail tube protein 7 121 1.5E-36 T 28-03-2018 IPR019596 Bacteriophage Mu, GpM, tail tube CI104_RS21840 ea53c9324684271a2bc4b7de7cc33302 248 SUPERFAMILY SSF53335 5 244 7.67E-45 T 28-03-2018 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase CI104_RS21840 ea53c9324684271a2bc4b7de7cc33302 248 Pfam PF13847 Methyltransferase domain 36 156 1.8E-10 T 28-03-2018 IPR025714 Methyltransferase domain CI104_RS21840 ea53c9324684271a2bc4b7de7cc33302 248 PIRSF PIRSF034653 1 248 2.5E-118 T 28-03-2018 IPR017031 Predicted S-adenosyl-L-methionine dependent methyltransferase, YjhP-type CI104_RS21840 ea53c9324684271a2bc4b7de7cc33302 248 Gene3D G3DSA:3.40.50.150 1 248 1.8E-38 T 28-03-2018 CI104_RS03805 bcb4967dfa86454d039ecb635f318b5b 257 Pfam PF02535 ZIP Zinc transporter 103 246 1.5E-22 T 28-03-2018 IPR003689 Zinc/iron permease GO:0016020|GO:0030001|GO:0046873|GO:0055085 CI104_RS17430 5fae56eb4d00fd5cbf66a244db8773c5 128 Hamap MF_00538 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF [arnF]. 1 125 20.043 T 28-03-2018 IPR022832 Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF CI104_RS25465 8a13d76be66ced91e80150c0bd097e9c 375 Pfam PF11348 Protein of unknown function (DUF3150) 28 262 3.3E-23 T 28-03-2018 IPR021496 Protein of unknown function DUF3150 CI104_RS14805 89e786f79e8bca08213cfe3d116e7e99 62 Pfam PF10948 Protein of unknown function (DUF2635) 6 49 2.9E-14 T 28-03-2018 IPR024400 Protein of unknown function DUF2635 CI104_RS26310 d9c79b20d800b5a50ccf9e5bc96c6a3e 322 Pfam PF13737 Transposase DDE domain 34 145 3.8E-45 T 28-03-2018 IPR025668 Transposase DDE domain CI104_RS07945 2e40ebfa2452deba9f7b997a6487c21d 269 Pfam PF05853 beta-keto acid cleavage enzyme 20 264 1.0E-63 T 28-03-2018 IPR008567 3-keto-5-aminohexanoate cleavage enzyme GO:0016740|GO:0019475 KEGG: 00310+2.3.1.247|KEGG: 00600+2.3.1.24 CI104_RS07945 2e40ebfa2452deba9f7b997a6487c21d 269 Gene3D G3DSA:3.20.20.70 1 269 2.4E-67 T 28-03-2018 IPR013785 Aldolase-type TIM barrel GO:0003824 CI104_RS00725 2e6fb09224279840b9147ad8cacf37d5 120 PIRSF PIRSF028770 1 120 1.9E-63 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CI104_RS00725 2e6fb09224279840b9147ad8cacf37d5 120 Pfam PF11742 Protein of unknown function (DUF3302) 3 78 2.6E-40 T 28-03-2018 IPR011223 Uncharacterised conserved protein UCP028770 CI104_RS04370 ff73c1b1785a21698d73dfdcf1998e63 275 Pfam PF11392 Protein of unknown function (DUF2877) 148 249 6.3E-25 T 28-03-2018 IPR021530 Protein of unknown function DUF2877 CI104_RS23235 ce264bb854108b7870fb90cec8277e7a 136 Pfam PF03788 LrgA family 31 122 7.3E-25 T 28-03-2018 IPR005538 LrgA/CidA family GO:0016021 CI104_RS17710 373e05ff043d7c98fb91616c2e631cc1 162 Pfam PF02674 Colicin V production protein 4 141 2.2E-36 T 28-03-2018 IPR003825 Colicin V production, CvpA GO:0009403|GO:0016020 CI104_RS26395 a2da68481543caac4353a0e9407191d1 91 Pfam PF02583 Metal-sensitive transcriptional repressor 7 87 5.0E-19 T 28-03-2018 IPR003735 Metal-sensitive transcriptional repressor GO:0003677|GO:0006355|GO:0046872 CI104_RS10780 d77439ffc55cea6d3d46498eb3778870 148 Pfam PF07030 Protein of unknown function (DUF1320) 2 131 5.0E-37 T 28-03-2018 IPR009752 Bacteriophage Mu, Gp36 CI104_RS09595 70bd12fde23b2c9de0925da7b6f3a8c3 197 Pfam PF10076 Uncharacterised protein conserved in bacteria (DUF2313) 12 197 5.4E-40 T 28-03-2018 IPR018755 Bacteriophage Mu-like, Gp48 CI104_RS24800 fad86dbbf1e045bcd44a64ed572470ac 235 Gene3D G3DSA:3.30.450.40 49 229 6.6E-6 T 28-03-2018 IPR029016 GAF domain-like CI104_RS24800 fad86dbbf1e045bcd44a64ed572470ac 235 Pfam PF04340 Protein of unknown function, DUF484 11 232 6.7E-84 T 28-03-2018 IPR007435 Protein of unknown function DUF484 CI104_RS00310 c112cdf206b6d4495208fc4af5b6ac88 285 Pfam PF03613 PTS system mannose/fructose/sorbose family IID component 20 285 8.5E-86 T 28-03-2018 IPR004704 Phosphotransferase system, mannose/fructose/sorbose family IID component GO:0009401|GO:0016021 CI104_RS07065 e79d162a0e7a26febff1b548c3e8b719 114 Pfam PF11604 Copper binding periplasmic protein CusF 47 108 6.0E-25 T 28-03-2018 IPR021647 Copper binding periplasmic protein CusF CI104_RS13710 7f5c7da8c11cb84b6256795a0d0dc0cc 140 Pfam PF03724 META domain 28 129 7.0E-24 T 28-03-2018 IPR005184 Domain of unknown function DUF306, Meta/HslJ CI104_RS26505 c8c0b519ceae1ec66cfb4ed256ee4d61 56 SUPERFAMILY SSF52980 9 56 3.43E-13 T 28-03-2018 IPR011335 Restriction endonuclease type II-like Reactome: R-HSA-6783310 CI104_RS26505 c8c0b519ceae1ec66cfb4ed256ee4d61 56 Gene3D G3DSA:3.40.1350.10 8 56 3.7E-7 T 28-03-2018 CI104_RS06175 2427e4f65df0ff69993f11b5d7656ae0 890 Pfam PF10101 Predicted membrane protein (DUF2339) 528 883 1.0E-41 T 28-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane CI104_RS06175 2427e4f65df0ff69993f11b5d7656ae0 890 Pfam PF10101 Predicted membrane protein (DUF2339) 140 539 1.2E-105 T 28-03-2018 IPR019286 Protein of unknown function DUF2339, transmembrane CI104_RS06175 2427e4f65df0ff69993f11b5d7656ae0 890 PIRSF PIRSF035905 597 890 1.1E-17 T 28-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CI104_RS06175 2427e4f65df0ff69993f11b5d7656ae0 890 PIRSF PIRSF035905 9 618 4.7E-63 T 28-03-2018 IPR014600 Uncharacterised conserved protein UCP035905, membrane protein CI104_RS11225 49b60c96e04621fb5a4dde12a5f081c8 191 Pfam PF13643 Domain of unknown function (DUF4145) 84 173 3.8E-8 T 28-03-2018 IPR025285 Domain of unknown function DUF4145 CI104_RS05395 9f64d2ace7fe716196ede4f31e065e0d 84 SUPERFAMILY SSF101744 1 83 9.94E-29 T 28-03-2018 IPR023534 Rof/RNase P-like Reactome: R-HSA-6784531 CI104_RS05395 9f64d2ace7fe716196ede4f31e065e0d 84 Gene3D G3DSA:2.30.30.400 8 81 2.7E-26 T 28-03-2018 CI104_RS05395 9f64d2ace7fe716196ede4f31e065e0d 84 Pfam PF07073 Modulator of Rho-dependent transcription termination (ROF) 7 81 2.1E-27 T 28-03-2018 IPR009778 Modulator of Rho-dependent transcription termination CI104_RS02555 8a61fd748f0309d38d215df66cb46a1f 132 Pfam PF06295 Protein of unknown function (DUF1043) 6 126 3.1E-48 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 CI104_RS02555 8a61fd748f0309d38d215df66cb46a1f 132 PIRSF PIRSF006318 1 132 7.1E-52 T 28-03-2018 IPR009386 Protein of unknown function DUF1043 CI104_RS11480 894000ae8eac264c071afa6c731fe84c 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 32 52 4.3E-10 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat CI104_RS11480 894000ae8eac264c071afa6c731fe84c 61 Pfam PF10685 Stress-induced bacterial acidophilic repeat motif 10 30 6.7E-9 T 28-03-2018 IPR019626 Stress-induced protein, KGG, repeat CI104_RS04160 90eb8dcac24474cb0f6ab863ed814651 108 Pfam PF04320 Protein with unknown function (DUF469) 7 107 6.9E-43 T 28-03-2018 IPR007416 Protein of unknown function DUF469 CI104_RS06085 c00e6333b34545ff35c7838b3f34b298 152 Pfam PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 17 143 8.9E-49 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 CI104_RS06085 c00e6333b34545ff35c7838b3f34b298 152 Hamap MF_00489 UPF0178 protein YaiI [yaiI]. 1 147 33.057 T 28-03-2018 IPR003791 Protein of unknown function UPF0178 CI104_RS10665 09aaac2d5f2817b44116df52ec9b0bec 203 Pfam PF11363 Protein of unknown function (DUF3164) 9 201 2.3E-85 T 28-03-2018 IPR021505 Bacteriophage B3, Orf6 CI104_RS14765 ca95191a50c846afa9c0691ee73f9a7d 150 Pfam PF07409 Phage protein GP46 29 140 1.7E-33 T 28-03-2018 IPR010877 Bacteriophage Mu, Gp46 CI104_RS01190 42c2f59877e4328444f4dcbd2c61a56d 499 Pfam PF01384 Phosphate transporter family 30 488 3.0E-86 T 28-03-2018 IPR001204 Phosphate transporter GO:0005315|GO:0006817|GO:0016020 Reactome: R-HSA-427652 CI104_RS04995 f0cac809739a5839177d3fd0ce404440 284 Pfam PF17113 Regulatory signalling modulator protein AmpE 1 284 6.3E-158 T 28-03-2018 IPR031347 Protein AmpE CI104_RS15185 d055ff9c16a4f0ecf19d61dcad0d4e51 47 Hamap MF_01596 PhoP/PhoQ regulator MgrB [mgrB]. 1 47 20.73 T 28-03-2018 IPR020907 PhoP/PhoQ regulator MgrB CI104_RS15185 d055ff9c16a4f0ecf19d61dcad0d4e51 47 Pfam PF13998 MgrB protein 19 47 8.2E-18 T 28-03-2018 IPR020907 PhoP/PhoQ regulator MgrB CI104_RS15830 1b7ed4138d0574b8da49256deb3007a7 421 Pfam PF04143 Sulphur transport 257 406 1.3E-22 T 28-03-2018 IPR007272 Sulphur transport domain CI104_RS15830 1b7ed4138d0574b8da49256deb3007a7 421 Pfam PF04143 Sulphur transport 17 180 1.5E-26 T 28-03-2018 IPR007272 Sulphur transport domain CI104_RS20235 56421bb5ea3e7195defc45f8f12b0a03 55 Pfam PF13978 Protein of unknown function (DUF4223) 1 54 4.1E-31 T 28-03-2018 IPR025318 Protein of unknown function DUF4223 CI104_RS10745 4f84c61e811228c41d6674a7097a1170 507 PIRSF PIRSF007056 1 507 1.3E-236 T 28-03-2018 IPR012036 Bacteriophage Mu, Gp28 CI104_RS01385 34e6e1a42e710fe5fa1a946a3dbfe6f8 119 Pfam PF10694 Protein of unknown function (DUF2500) 5 115 7.3E-31 T 28-03-2018 IPR019635 Protein of unknown function DUF2500 CI104_RS12565 be88f8da768393f6365add30962e993d 492 Pfam PF06097 Bacterial protein of unknown function (DUF945) 1 480 1.5E-133 T 28-03-2018 IPR010352 Protein of unknown function DUF945 CI104_RS07855 1a041cd32b202bd41c7f52cf3de61342 331 Pfam PF06166 Protein of unknown function (DUF979) 7 330 3.0E-128 T 28-03-2018 IPR009323 Protein of unknown function DUF979 CI104_RS23755 30ad7f0d0b58bc16a10bac557d4f5cca 105 SUPERFAMILY SSF46973 1 100 6.02E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS23755 30ad7f0d0b58bc16a10bac557d4f5cca 105 Gene3D G3DSA:1.20.58.80 2 100 9.2E-33 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS23755 30ad7f0d0b58bc16a10bac557d4f5cca 105 Pfam PF02255 PTS system, Lactose/Cellobiose specific IIA subunit 7 99 7.5E-31 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS23755 30ad7f0d0b58bc16a10bac557d4f5cca 105 PIRSF PIRSF000699 1 104 6.4E-32 T 28-03-2018 IPR003188 Phosphotransferase system, lactose/cellobiose-type IIA subunit GO:0009401 CI104_RS26360 d675b967ceca5726915a524e69981f96 143 Pfam PF04343 Protein of unknown function, DUF488 13 131 3.1E-23 T 28-03-2018 IPR007438 Protein of unknown function DUF488 CI104_RS03865 818302f2e270811a5734e6fc503b5958 606 PIRSF PIRSF014753 3 601 3.5E-169 T 28-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 CI104_RS03865 818302f2e270811a5734e6fc503b5958 606 Pfam PF10022 Uncharacterized protein conserved in bacteria (DUF2264) 14 355 2.4E-121 T 28-03-2018 IPR016624 Uncharacterised conserved protein UCP014753 CI104_RS04585 abda2862ed54e97a2457b48025706b14 266 Pfam PF03609 PTS system sorbose-specific iic component 2 241 8.1E-70 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS24295 e183fc3bc5a1c34eb9ed978163dbb6b1 334 Gene3D G3DSA:1.10.3470.10 11 311 6.6E-28 T 28-03-2018 IPR035568 ABC transporter, FecCD/TroCD-like CI104_RS24295 e183fc3bc5a1c34eb9ed978163dbb6b1 334 Pfam PF02653 Branched-chain amino acid transport system / permease component 37 305 1.7E-44 T 28-03-2018 IPR001851 ABC transporter, permease GO:0005215|GO:0006810|GO:0016020 CI104_RS14820 f50d14fef7d373fbccbf18f25a5ef822 146 Gene3D G3DSA:1.10.3230.10 13 118 9.5E-4 T 28-03-2018 CI104_RS14820 f50d14fef7d373fbccbf18f25a5ef822 146 Pfam PF07030 Protein of unknown function (DUF1320) 4 125 5.2E-33 T 28-03-2018 IPR009752 Bacteriophage Mu, Gp36 CI104_RS21455 41ceeec11c13ec3e780b4be7be45bb20 236 SUPERFAMILY SSF51735 39 224 9.89E-19 T 28-03-2018 IPR016040 NAD(P)-binding domain CI104_RS21455 41ceeec11c13ec3e780b4be7be45bb20 236 Gene3D G3DSA:3.40.50.720 39 225 2.5E-13 T 28-03-2018 CI104_RS21455 41ceeec11c13ec3e780b4be7be45bb20 236 Pfam PF13561 Enoyl-(Acyl carrier protein) reductase 67 222 3.7E-14 T 28-03-2018 CI104_RS14795 4c598576af259f4810bffc9c0ad7bcf9 118 Pfam PF10618 Phage tail tube protein 1 116 2.3E-36 T 28-03-2018 IPR019596 Bacteriophage Mu, GpM, tail tube CI104_RS26830 e615b72d30162dd691154e56ddbd3316 67 Gene3D G3DSA:3.40.630.30 1 67 2.7E-4 T 28-03-2018 CI104_RS20245 b8e3701607e4c3cdba72bd052ee96799 131 Pfam PF04241 Protein of unknown function (DUF423) 20 106 2.2E-23 T 28-03-2018 IPR006696 Protein of unknown function DUF423 CI104_RS27740 d630c750d43376bcd530c1e972d51ca8 188 Pfam PF07296 TraP protein 8 157 3.3E-27 T 28-03-2018 IPR009913 TraP CI104_RS03275 e99e5fde339c9ef505aab27831043387 321 Pfam PF03741 Integral membrane protein TerC family 80 282 2.5E-56 T 28-03-2018 IPR005496 Integral membrane protein TerC GO:0016021 CI104_RS03275 e99e5fde339c9ef505aab27831043387 321 TIGRFAM TIGR03718 R_switched_Alx: integral membrane protein, TerC family 7 311 2.4E-120 T 28-03-2018 IPR022369 Integral membrane protein TerC, riboswitch-linked GO:0016021 CI104_RS16530 202985390477e524155b9137b3a03b57 406 TIGRFAM TIGR04010 WcaD: putative colanic acid polymerase WcaD 1 404 1.4E-263 T 28-03-2018 IPR024013 Colanic acid biosynthesis, putative colanic acid polymerase, WcaD CI104_RS12725 f3e829f03563c17142fc5810a1c3a1e2 101 ProDom PD336997 PRECURSOR SIGNAL MEMBRANE OUTER YNFD ESCHERICHIA EXPORTED PP0087 COLI PP0090 2 80 7.0E-30 T 28-03-2018 IPR010595 Protein of unknown function DUF1161 CI104_RS12725 f3e829f03563c17142fc5810a1c3a1e2 101 Pfam PF06649 Protein of unknown function (DUF1161) 27 80 8.6E-22 T 28-03-2018 IPR010595 Protein of unknown function DUF1161 CI104_RS03520 470f4c021c8f287698f0dca82202611e 154 Pfam PF05926 Phage head completion protein (GPL) 16 154 4.2E-52 T 28-03-2018 IPR009225 Bacteriophage head completion protein GpL GO:0019069 CI104_RS12825 4493ad46e63447a2d76b02a76b6b44ff 105 Pfam PF07377 Protein of unknown function (DUF1493) 15 105 4.9E-18 T 28-03-2018 IPR010862 Protein of unknown function DUF1493 CI104_RS08480 dd791d812ef917067c8b92f34b883181 528 Gene3D G3DSA:3.40.720.10 209 488 3.6E-18 T 28-03-2018 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha GO:0003824|GO:0008152 CI104_RS08480 dd791d812ef917067c8b92f34b883181 528 Pfam PF00884 Sulfatase 218 483 1.1E-38 T 28-03-2018 IPR000917 Sulfatase, N-terminal GO:0008152|GO:0008484 CI104_RS08480 dd791d812ef917067c8b92f34b883181 528 SUPERFAMILY SSF53649 220 487 1.94E-18 T 28-03-2018 IPR017850 Alkaline-phosphatase-like, core domain GO:0003824|GO:0008152 CI104_RS21435 a81c2d8820e6584fecc6307d0f4c3759 54 Pfam PF06568 Domain of unknown function (DUF1127) 18 53 1.1E-11 T 28-03-2018 IPR009506 Protein of unknown function DUF1127 CI104_RS03540 df457d2f5e303b30228d582da243b7b3 141 Gene3D G3DSA:1.20.5.370 73 103 0.051 T 28-03-2018 CI104_RS03540 df457d2f5e303b30228d582da243b7b3 141 TIGRFAM TIGR03495 phage_LysB: phage lysis regulatory protein, LysB family 3 135 6.6E-51 T 28-03-2018 IPR020000 Bacteriophage P2, LysB CI104_RS04075 122cc0c4596f37567ffba6c107c1831c 334 Pfam PF07168 Ureide permease 169 331 1.5E-10 T 28-03-2018 IPR009834 Ureide permease GO:0071705 CI104_RS04075 122cc0c4596f37567ffba6c107c1831c 334 Pfam PF07168 Ureide permease 42 158 2.3E-10 T 28-03-2018 IPR009834 Ureide permease GO:0071705 CI104_RS11915 8e43cc01150853d4b0ce952f62e12619 252 Pfam PF04338 Protein of unknown function, DUF481 48 251 5.2E-58 T 28-03-2018 IPR007433 Protein of unknown function DUF481 CI104_RS01210 c1edb5ac6e27d51387a0880b89f94c64 374 Pfam PF12698 ABC-2 family transporter protein 27 363 6.3E-32 T 28-03-2018 CI104_RS01210 c1edb5ac6e27d51387a0880b89f94c64 374 Gene3D G3DSA:3.40.1710.10 44 193 1.4E-20 T 28-03-2018 CI104_RS27680 92c0abb8de34fa1628943af42cc95708 456 Pfam PF06122 Conjugative relaxosome accessory transposon protein 29 377 3.3E-113 T 28-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CI104_RS13610 45c88e1cca0dbf41f8ac3204a92a58da 264 Gene3D G3DSA:1.10.3620.10 148 252 4.5E-40 T 28-03-2018 CI104_RS13610 45c88e1cca0dbf41f8ac3204a92a58da 264 Pfam PF02698 DUF218 domain 38 177 2.2E-16 T 28-03-2018 IPR003848 Domain of unknown function DUF218 CI104_RS11895 285802a0b0ee6139e201af3a26b44257 178 ProDom PD035714 MEMBRANE REGULATOR YNIB TRANSMEMBRANE YFEABCD YFEE PROBABLE LOCUS ESCHERICHIA ECS2432 1 178 5.0E-84 T 28-03-2018 CI104_RS11895 285802a0b0ee6139e201af3a26b44257 178 Pfam PF14002 YniB-like protein 15 177 1.6E-78 T 28-03-2018 IPR025229 YniB-like protein CI104_RS11770 91372c00cb7194ae9857f330b4807318 224 Pfam PF09335 SNARE associated Golgi protein 67 184 2.1E-21 T 28-03-2018 IPR032816 SNARE associated Golgi protein CI104_RS03230 aacffc2ccfabf265830f8fa71d2aa327 122 Pfam PF06476 Protein of unknown function (DUF1090) 11 116 2.8E-38 T 28-03-2018 IPR009468 Protein of unknown function DUF1090 CI104_RS11310 dfbade658407b515c02146a22aedd36c 115 Pfam PF05939 Phage minor tail protein 4 113 1.7E-29 T 28-03-2018 IPR010265 Bacteriophage lambda, GpM, minor tail CI104_RS10740 8c1e6898fd8c3e29cc561eba9c4f871e 181 Pfam PF11985 Protein of unknown function (DUF3486) 1 178 1.5E-53 T 28-03-2018 IPR021874 Bacteriophage Mu, Gp27 CI104_RS03330 2bfb86b2a30d55ec0ac40a7b68c4234f 429 Pfam PF13416 Bacterial extracellular solute-binding protein 54 365 1.3E-30 T 28-03-2018 CI104_RS03330 2bfb86b2a30d55ec0ac40a7b68c4234f 429 SUPERFAMILY SSF53850 20 427 5.43E-59 T 28-03-2018 CI104_RS03330 2bfb86b2a30d55ec0ac40a7b68c4234f 429 Gene3D G3DSA:3.40.190.10 154 429 3.2E-36 T 28-03-2018 CI104_RS02940 86ce10a3526098d1852a80917f014da4 298 Pfam PF01136 Peptidase family U32 98 204 2.3E-11 T 28-03-2018 IPR001539 Peptidase U32 GO:0006508|GO:0008233 CI104_RS08005 f36788f3e33084319c1736f49e479673 105 Pfam PF14330 Domain of unknown function (DUF4387) 6 102 2.1E-39 T 28-03-2018 IPR025496 Protein of unknown function DUF4387 CI104_RS06720 66e625b9d024c0acee876ef4f4fcf59c 116 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 43 116 2.7E-14 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CI104_RS26380 c962ef9ef4fbddb2cfb3ec040fe98957 444 Pfam PF11902 Protein of unknown function (DUF3422) 24 433 3.8E-143 T 28-03-2018 IPR021830 Protein of unknown function DUF3422 CI104_RS28535 6088abaa6a6d4c3c4bf2de2749f2bc4e 203 Pfam PF11140 Protein of unknown function (DUF2913) 9 172 1.5E-28 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 CI104_RS14790 1e336871b0db36efbe33a17f868b3704 131 Pfam PF10109 Phage tail assembly chaperone proteins, E, or 41 or 14 5 107 2.4E-11 T 28-03-2018 IPR019289 Bacteriophage tail protein Gp41, putative CI104_RS15920 4d376ac5aa1b9766a2f619f025af0582 75 Pfam PF10733 Protein of unknown function (DUF2525) 18 75 2.0E-31 T 28-03-2018 IPR019669 Uncharacterised bacterial stress protein YodD CI104_RS06505 3fbc0494167925fce9c3fc20dcfb7e9a 189 Pfam PF09619 Type III secretion system lipoprotein chaperone (YscW) 45 149 1.7E-41 T 28-03-2018 CI104_RS11450 da6337936b78bc4825d25ce861c86a26 88 ProDom PD865043 PLASMID SPA-ORF10 3'REGION CYTOPLASMIC ORF-10 SPAS STY1854 41 88 4.0E-4 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CI104_RS11450 da6337936b78bc4825d25ce861c86a26 88 Pfam PF10798 Biofilm development protein YmgB/AriR 29 87 1.6E-21 T 28-03-2018 IPR024753 Regulatory protein AriR GO:0042710|GO:0071229 CI104_RS25400 e51ecf758dcc5c44baf68bfb59481a5c 141 ProDom PD022759 ALGINATE BIOSYNTHESIS ALGF PRECURSOR SIGNAL PERIPLASMIC TRANSFERASE O-ACETYLTRANSFERASE 22 87 0.008 T 28-03-2018 IPR035422 Alginate O-acetyl transferase AlgF GO:0042121 CI104_RS22515 b3afd0a674a1d0e713cb7f404f194721 65 Pfam PF09838 Uncharacterized protein conserved in bacteria (DUF2065) 5 60 2.7E-21 T 28-03-2018 IPR019201 Protein of unknown function DUF2065 CI104_RS04325 c8ee0cba62cab4a9e2b1632303bfff5b 192 Pfam PF12822 ECF transporter, substrate-specific component 10 173 4.1E-11 T 28-03-2018 IPR024529 ECF transporter, substrate-specific component GO:0005215 CI104_RS05090 440bd511b2bd614ac9372e630bbb2bd0 173 Gene3D G3DSA:3.40.1000.10 26 173 3.2E-11 T 28-03-2018 CI104_RS22675 563d3d416b921011a3b9778e96b38701 117 Pfam PF13698 Domain of unknown function (DUF4156) 23 115 2.4E-31 T 28-03-2018 IPR025294 Protein of unknown function DUF4156 CI104_RS11240 05d3e5e17dc7375d8bd0fb9a676f8d3e 127 Pfam PF05930 Prophage CP4-57 regulatory protein (AlpA) 36 85 1.4E-9 T 28-03-2018 IPR010260 DNA-binding transcriptional activator AlpA CI104_RS11240 05d3e5e17dc7375d8bd0fb9a676f8d3e 127 Gene3D G3DSA:1.10.1660.10 31 99 2.7E-5 T 28-03-2018 CI104_RS16455 d90d2defab849db613143c53c2a5ec81 414 Pfam PF13440 Polysaccharide biosynthesis protein 49 324 3.1E-13 T 28-03-2018 CI104_RS28195 b93b8a1d30399e573494e56dc73e7b59 240 Pfam PF06952 PsiA protein 1 237 1.2E-123 T 28-03-2018 IPR009713 Uncharacterised protein family PsiA CI104_RS05080 69a1fb3bf7e818df742f6914beec1599 115 Pfam PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) 23 106 2.7E-9 T 28-03-2018 IPR019114 Chaperone lipoprotein, PulS/OutS-like CI104_RS05080 69a1fb3bf7e818df742f6914beec1599 115 ProDom PD074041 YACC EXPORTED PRECURSOR SIGNAL PERIPLASMIC Y0776 SIMILAR ECS0126 STY0189 ESCHERICHIA 1 115 8.0E-63 T 28-03-2018 CI104_RS27775 8547e9dcc6cc95b7ef8e6f989eca1c7d 188 Pfam PF05309 TraE protein 1 182 1.4E-58 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CI104_RS27775 8547e9dcc6cc95b7ef8e6f989eca1c7d 188 TIGRFAM TIGR02761 TraE_TIGR: type IV conjugative transfer system protein TraE 1 180 1.8E-54 T 28-03-2018 IPR007973 Pilus assembly TraE GO:0000746 CI104_RS10870 58baf30f51e9b79f009c3b9e04aa6940 193 Pfam PF02413 Caudovirales tail fibre assembly protein, lambda gpK 71 191 2.1E-28 T 28-03-2018 IPR003458 Bacteriophage T4, Gp38, tail fibre assembly CI104_RS26625 4d853062891fea46fa15511c244b0da1 70 Pfam PF11809 Domain of unknown function (DUF3330) 1 70 6.1E-34 T 28-03-2018 IPR021767 Protein of unknown function DUF3330 CI104_RS07940 d6af68ed68814d1ab45fa16944e8d7ff 448 Pfam PF01758 Sodium Bile acid symporter family 96 262 2.0E-27 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CI104_RS20210 9c6c95cef5a37ca99d2e0fc6593e8ef1 183 Gene3D G3DSA:3.40.190.10 1 175 4.8E-6 T 28-03-2018 CI104_RS27535 1d01d56df764930ca669242cdf16e83e 203 Pfam PF11140 Protein of unknown function (DUF2913) 9 170 4.7E-30 T 28-03-2018 IPR021316 Protein of unknown function DUF2913 CI104_RS22460 6337057414735c25b10fab1c53fed6f9 465 Pfam PF03611 PTS system sugar-specific permease component 15 410 8.0E-123 T 28-03-2018 IPR004703 Phosphotransferase system, sugar-specific permease component GO:0009401|GO:0016021 CI104_RS15700 bf8e3c34b3d11dce882427e359725ca2 192 Pfam PF06629 MltA-interacting protein MipA 4 156 4.8E-17 T 28-03-2018 IPR010583 MltA-interacting MipA CI104_RS25305 12712b25c621d9ca2a4fc4de722d4762 105 Pfam PF07178 TraL protein 12 102 2.1E-8 T 28-03-2018 IPR009838 Type IV conjugative transfer system, protein TraL GO:0000746|GO:0019867 CI104_RS15790 4f8d8f353299700013673da0d260ad60 183 TIGRFAM TIGR03823 FliZ: flagellar regulatory protein FliZ 1 165 1.5E-87 T 28-03-2018 IPR022523 Flagellar regulator, FliZ CI104_RS15790 4f8d8f353299700013673da0d260ad60 183 Pfam PF02899 Phage integrase, N-terminal SAM-like domain 90 165 1.6E-13 T 28-03-2018 IPR004107 Integrase, SAM-like, N-terminal GO:0003677|GO:0015074 CI104_RS12935 65c1d27e950dbf354a3f917d0420a116 304 Pfam PF01062 Bestrophin, RFP-TM, chloride channel 1 280 1.0E-59 T 28-03-2018 IPR021134 Bestrophin/UPF0187 Reactome: R-HSA-2672351 CI104_RS03055 882b9d464adf2a38c9af882c621c8f5f 259 Pfam PF03609 PTS system sorbose-specific iic component 5 236 8.0E-70 T 28-03-2018 IPR004700 Phosphotransferase system, mannose/fructose/sorbose family, IIC subunit GO:0009401|GO:0016021 CI104_RS09070 753a2c44ed118481b5b2f52eafad6da2 410 Pfam PF06224 Winged helix DNA-binding domain 38 381 3.9E-81 T 28-03-2018 IPR009351 Protein of unknown function DUF1006 CI104_RS03615 4184008d036a48135c6e06b6fbe54309 39 Pfam PF06528 Phage P2 GpE 1 36 8.8E-18 T 28-03-2018 IPR009493 Burkholderia phage phiE202, Gp27 CI104_RS28425 0e83513451ec4ebc486b4619febecbfc 459 Pfam PF06122 Conjugative relaxosome accessory transposon protein 32 380 1.2E-114 T 28-03-2018 IPR010927 Type IV conjugative transfer system protein TraH CI104_RS26565 98aa86bfc78f7c49fd581237d06649e5 285 Pfam PF13391 HNH endonuclease 180 229 8.3E-10 T 28-03-2018 IPR003615 HNH nuclease CI104_RS03530 8cd9865f70301bc074d34117c59e1d30 71 Pfam PF16080 Bacteriophage holin family HP1 5 56 1.6E-10 T 28-03-2018 IPR032118 Bacteriophage holin HP1 family CI104_RS06800 8eea6ea100b2b5b227c2e73cc4611817 234 Pfam PF05944 Phage small terminase subunit 37 165 1.3E-39 T 28-03-2018 IPR010270 Bacteriophage P2, GpM GO:0003677|GO:0004519|GO:0019069 CI104_RS12945 feaaee05c06c0f4a2ea6933023c0c4b5 158 Pfam PF07180 CaiF/GrlA transcriptional regulator 15 93 3.2E-11 T 28-03-2018 IPR020357 Transcription regulator CaiF/GrlA GO:0006351 CI104_RS26945 bb65a42d5087336032bfe0b952b6cdd4 133 Gene3D G3DSA:3.40.1800.10 32 133 4.3E-23 T 28-03-2018 CI104_RS20975 3c64f4ee546f89a9ecf67876c04eb439 455 Pfam PF00860 Permease family 32 415 1.7E-79 T 28-03-2018 IPR006043 Xanthine/uracil/vitamin C permease GO:0005215|GO:0006810|GO:0016020|GO:0055085 CI104_RS11090 940256ed472303d53a347f617de3b5cd 289 Pfam PF10543 ORF6N domain 23 105 1.5E-20 T 28-03-2018 IPR018873 KilA-N, DNA-binding domain CI104_RS16295 953f5fcb7777451f1dddb21dc364633f 352 Pfam PF04632 Fusaric acid resistance protein family 21 338 1.7E-17 T 28-03-2018 IPR006726 Para-hydroxybenzoic acid efflux pump subunit AaeB/fusaric acid resistance protein GO:0005886|GO:0006810 CI104_RS15255 01964c1f11b58f9824c2517f9e111e15 112 Pfam PF10709 Protein of unknown function (DUF2511) 25 112 8.7E-43 T 28-03-2018 IPR019648 Protein of unknown function DUF2511 CI104_RS19445 c932899443dbbed9be913ad9843831db 342 Pfam PF14390 Putative PD-(D/E)XK family member, (DUF4420) 12 317 1.5E-65 T 28-03-2018 IPR025534 Putative PD-(D/E)XK family member (DUF4420) CI104_RS22290 5f0c3ab87d00b70b871204258a5625a8 1258 Pfam PF04357 TamB, inner membrane protein subunit of TAM complex 922 1258 6.4E-68 T 28-03-2018 IPR007452 Translocation and assembly module TamB CI104_RS27675 06816c798b1897a39d003fffad4992c5 940 Pfam PF07916 TraG-like protein, N-terminal region 3 444 5.0E-110 T 28-03-2018 IPR012931 TraG-like, N-terminal CI104_RS27450 58a46c703f4cbf527651683931256e34 193 Pfam PF01526 Tn3 transposase DDE domain 4 167 3.7E-66 T 28-03-2018 IPR002513 Tn3 transposase DDE domain GO:0004803|GO:0006313 CI104_RS00700 0061f8b06026a5efec60bdd9a40923fc 120 Pfam PF10928 Protein of unknown function (DUF2810) 66 117 2.5E-33 T 28-03-2018 IPR021230 Protein of unknown function DUF2810 CI104_RS14785 c30498501d6254e0e99f9078899e965c 638 Pfam PF10145 Phage-related minor tail protein 166 295 6.3E-11 T 28-03-2018 IPR010090 Phage tail tape measure protein CI104_RS28265 1d9cb127d4989c031134d8c0dba65d44 273 Pfam PF06067 Domain of unknown function (DUF932) 36 262 2.3E-56 T 28-03-2018 IPR026325 Protein of unknown function DUF932 CI104_RS03840 ae6074493c5d7dfab473de2f266dae80 140 Pfam PF06853 Protein of unknown function (DUF1249) 21 134 1.2E-41 T 28-03-2018 IPR009659 Protein of unknown function DUF1249 CI104_RS21615 dd9337028efdcbe4b6ab387ff5db7591 310 Pfam PF05947 Type VI secretion system, TssF 2 296 6.1E-65 T 28-03-2018 IPR010272 Type VI secretion system, TssF-like CI104_RS27890 58322dce92b0abb4a2524bad6ba69f34 168 Pfam PF07275 Antirestriction protein (ArdA) 10 166 3.7E-35 T 28-03-2018 IPR009899 Antirestriction CI104_RS15695 a3b45ecd293dd1c6adaf0e35855cfb0d 54 Pfam PF06629 MltA-interacting protein MipA 2 54 1.6E-6 T 28-03-2018 IPR010583 MltA-interacting MipA CI104_RS03595 c1a30fcb6f21f88ac93254b399382235 355 Pfam PF01757 Acyltransferase family 17 336 3.6E-22 T 28-03-2018 IPR002656 Acyltransferase 3 GO:0016747 CI104_RS09705 0c960ef2d4e5cba49c97da885873b0c1 277 Pfam PF13503 Domain of unknown function (DUF4123) 47 133 3.3E-7 T 28-03-2018 IPR025391 Domain of unknown function DUF4123 CI104_RS13440 05c2d3f54ed86813bb5d32d7a8081705 42 Pfam PF10617 Protein of unknown function (DUF2474) 4 41 1.4E-16 T 28-03-2018 IPR018895 Protein of unknown function DUF2474 CI104_RS21315 0ab12f68f0f2a364ce70ee400d328958 179 Hamap MF_01061 Primosomal protein 1 [dnaT]. 3 179 42.246 T 28-03-2018 IPR020917 Primosomal protein 1 GO:0006260 CI104_RS17775 9d01bdca8bbb535f6b516f8a1637aacf 177 Pfam PF12883 Protein of unknown function (DUF3828) 25 145 1.2E-32 T 28-03-2018 IPR024289 Domain of unknown function DUF3828 CI104_RS23500 cf3ba8e9e829b35a0779fae18ad04181 312 Pfam PF01758 Sodium Bile acid symporter family 36 213 6.8E-41 T 28-03-2018 IPR002657 Bile acid:sodium symporter/arsenical resistance protein Acr3 GO:0016020 CI104_RS14830 30a343f1a9d9e6135a468589f1e9c43b 297 Pfam PF10124 Mu-like prophage major head subunit gpT 8 295 2.1E-109 T 28-03-2018 IPR018774 Bacteriophage Mu, GpT CI104_RS07850 636b4111d000abaa89363b430ec7d030 242 Pfam PF06149 Protein of unknown function (DUF969) 7 224 4.2E-89 T 28-03-2018 IPR010374 Protein of unknown function DUF969 CI104_RS09495 cf00c2f8bb9d683713ecfbe8da5d7d6d 707 Pfam PF05876 Phage terminase large subunit (GpA) 48 648 7.3E-146 T 28-03-2018 IPR008866 Bacteriophage lambda, GpA CI104_RS25030 3a3a8c71c4b884bed8e9dcb23e1b878c 112 Pfam PF04219 Protein of unknown function, DUF 10 98 1.3E-38 T 28-03-2018 IPR007335 Protein of unknown function DUF413 CI104_RS28430 4ad735253f3b02847256f686cebb820c 949 Pfam PF07916 TraG-like protein, N-terminal region 3 444 4.0E-119 T 28-03-2018 IPR012931 TraG-like, N-terminal CI104_RS25760 696d5d458192c75f3b312ab3b1b87734 263 Pfam PF10263 SprT-like family 14 115 1.0E-11 T 28-03-2018 IPR006640 SprT-like CI104_RS16450 0c19def8935adb026468306821f2ef2b 379 Pfam PF14897 EpsG family 28 351 4.2E-42 T 28-03-2018 CI104_RS15630 6e097ef01d913b5df49e091478321fda 111 Pfam PF13992 YecR-like lipoprotein 26 98 6.7E-28 T 28-03-2018 IPR025731 YecR-like lipoprotein CI104_RS22815 d4a551f5888a24ce154caadefebde986 155 Pfam PF15941 FidL-like putative membrane protein 67 152 2.7E-7 T 28-03-2018 IPR031854 Putative membrane protein FidL-like CI104_RS23445 948706c00f17c6f08f126d2d3709ca97 698 Pfam PF06082 Exopolysaccharide biosynthesis protein YbjH 30 691 2.6E-267 T 28-03-2018 IPR010344 Exopolysaccharide biosynthesis protein YbjH CI104_RS13735 a621ded20179052c97d8fa6da78bd04d 70 Pfam PF13619 KTSC domain 7 64 7.9E-22 T 28-03-2018 IPR025309 KTSC domain CI104_RS25315 2d64d2565dcdd728b038596ed486d3df 423 Pfam PF06586 TraK protein 166 400 4.0E-12 T 28-03-2018 IPR010563 Pilus assembly TraK