locus-tag class description AM348_RS00010 PF07690 Major Facilitator Superfamily AM348_RS00015 PF07836 DmpG-like communication domain AM348_RS00015 PF00682 HMGL-like AM348_RS00020 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM348_RS00020 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation AM348_RS00025 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM348_RS00030 PF12697 Alpha/beta hydrolase family AM348_RS00035 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM348_RS00040 PF01494 FAD binding domain AM348_RS00045 PF09339 IclR helix-turn-helix domain AM348_RS00045 PF01614 Bacterial transcriptional regulator AM348_RS00065 PF10820 Protein of unknown function (DUF2543) AM348_RS00070 PF12706 Beta-lactamase superfamily domain AM348_RS00075 PF01965 DJ-1/PfpI family AM348_RS00085 PF00356 Bacterial regulatory proteins, lacI family AM348_RS00090 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM348_RS00090 PF16353 Domain of unknown function(DUF4981) AM348_RS00090 PF02929 Beta galactosidase small chain AM348_RS00090 PF00703 Glycosyl hydrolases family 2 AM348_RS00090 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM348_RS00095 PF01306 LacY proton/sugar symporter AM348_RS00100 PF13193 AMP-binding enzyme C-terminal domain AM348_RS00100 PF00501 AMP-binding enzyme AM348_RS00100 PF16177 Acetyl-coenzyme A synthetase N-terminus AM348_RS00105 PF03972 MmgE/PrpD family AM348_RS00110 PF00285 Citrate synthase, C-terminal domain AM348_RS00120 PF00158 Sigma-54 interaction domain AM348_RS00120 PF02954 Bacterial regulatory protein, Fis family AM348_RS00120 PF06506 Propionate catabolism activator AM348_RS00125 PF07338 Protein of unknown function (DUF1471) AM348_RS00130 PF01810 LysE type translocator AM348_RS00135 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS00140 PF12801 4Fe-4S binding domain AM348_RS00150 PF00593 TonB dependent receptor AM348_RS00150 PF07715 TonB-dependent Receptor Plug Domain AM348_RS00160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS00160 PF03466 LysR substrate binding domain AM348_RS00180 PF03606 C4-dicarboxylate anaerobic carrier AM348_RS00185 PF07687 Peptidase dimerisation domain AM348_RS00185 PF01546 Peptidase family M20/M25/M40 AM348_RS00195 PF09857 Putative toxin of bacterial toxin-antitoxin pair AM348_RS00200 PF13847 Methyltransferase domain AM348_RS00205 PF01965 DJ-1/PfpI family AM348_RS00210 PF04371 Porphyromonas-type peptidyl-arginine deiminase AM348_RS00215 PF05231 MASE1 AM348_RS00215 PF00563 EAL domain AM348_RS00220 PF00324 Amino acid permease AM348_RS00225 PF00120 Glutamine synthetase, catalytic domain AM348_RS00230 PF07722 Peptidase C26 AM348_RS00235 PF07883 Cupin domain AM348_RS00235 PF01381 Helix-turn-helix AM348_RS00240 PF00171 Aldehyde dehydrogenase family AM348_RS00245 PF01266 FAD dependent oxidoreductase AM348_RS00250 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM348_RS00250 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM348_RS00255 PF00374 Nickel-dependent hydrogenase AM348_RS00260 PF01292 Prokaryotic cytochrome b561 AM348_RS00265 PF01750 Hydrogenase maturation protease AM348_RS00270 PF07449 Hydrogenase-1 expression protein HyaE AM348_RS00275 PF04809 HupH hydrogenase expression protein, C-terminal conserved region AM348_RS00280 PF01654 Cytochrome bd terminal oxidase subunit I AM348_RS00285 PF02322 Cytochrome bd terminal oxidase subunit II AM348_RS00290 PF08173 Membrane bound YbgT-like protein AM348_RS00300 PF00392 Bacterial regulatory proteins, gntR family AM348_RS00300 PF00155 Aminotransferase class I and II AM348_RS00310 PF00356 Bacterial regulatory proteins, lacI family AM348_RS00315 PF03553 Na+/H+ antiporter family AM348_RS00320 PF00155 Aminotransferase class I and II AM348_RS00350 PF14659 Phage integrase, N-terminal SAM-like domain AM348_RS00350 PF13356 Arm DNA-binding domain AM348_RS00350 PF00589 Phage integrase family AM348_RS00360 PF04191 Phospholipid methyltransferase AM348_RS00365 PF00563 EAL domain AM348_RS00365 PF12792 CSS motif domain associated with EAL AM348_RS00380 PF15976 CS1-pili formation C-terminal AM348_RS00380 PF16967 E-set like domain AM348_RS00385 PF18649 EcpB C-terminal domain AM348_RS00390 PF16449 Fimbrillin MatB AM348_RS00395 PF00325 Bacterial regulatory proteins, crp family AM348_RS00395 PF00027 Cyclic nucleotide-binding domain AM348_RS00400 PF00171 Aldehyde dehydrogenase family AM348_RS00405 PF00696 Amino acid kinase family AM348_RS00405 PF01472 PUA domain AM348_RS00410 PF00267 Gram-negative porin AM348_RS00415 PF07417 Sigma factor-binding transcriptional regulator Crl AM348_RS00420 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM348_RS00425 PF00156 Phosphoribosyl transferase domain AM348_RS00430 PF07687 Peptidase dimerisation domain AM348_RS00430 PF01546 Peptidase family M20/M25/M40 AM348_RS00435 PF00817 impB/mucB/samB family AM348_RS00435 PF11799 impB/mucB/samB family C-terminal domain AM348_RS00435 PF11798 IMS family HHH motif AM348_RS00440 PF03734 L,D-transpeptidase catalytic domain AM348_RS00445 PF13230 Glutamine amidotransferases class-II AM348_RS00450 PF13580 SIS domain AM348_RS00460 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM348_RS00460 PF09317 Domain of unknown function (DUF1974) AM348_RS00460 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM348_RS00460 PF02770 Acyl-CoA dehydrogenase, middle domain AM348_RS00465 PF00795 Carbon-nitrogen hydrolase AM348_RS00475 PF00563 EAL domain AM348_RS00490 PF00419 Fimbrial protein AM348_RS00500 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS00500 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS00505 PF13953 PapC C-terminal domain AM348_RS00505 PF13954 PapC N-terminal domain AM348_RS00505 PF00577 Outer membrane usher protein AM348_RS00515 PF00419 Fimbrial protein AM348_RS00520 PF00072 Response regulator receiver domain AM348_RS00520 PF00486 Transcriptional regulatory protein, C terminal AM348_RS00535 PF00929 Exonuclease AM348_RS00540 PF00075 RNase H AM348_RS00545 PF08241 Methyltransferase domain AM348_RS00550 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM348_RS00550 PF00753 Metallo-beta-lactamase superfamily AM348_RS00555 PF01464 Transglycosylase SLT domain AM348_RS00555 PF01476 LysM domain AM348_RS00560 PF08241 Methyltransferase domain AM348_RS00565 PF03372 Endonuclease/Exonuclease/phosphatase family AM348_RS00570 PF07690 Major Facilitator Superfamily AM348_RS00575 PF03466 LysR substrate binding domain AM348_RS00575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS00580 PF00248 Aldo/keto reductase family AM348_RS00620 PF09383 NIL domain AM348_RS00620 PF00005 ABC transporter AM348_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS00630 PF03180 NLPA lipoprotein AM348_RS00635 PF16358 RcsF lipoprotein AM348_RS00640 PF18389 TrmO C-terminal domain AM348_RS00640 PF01980 tRNA-methyltransferase O AM348_RS00645 PF03129 Anticodon binding domain AM348_RS00645 PF04073 Aminoacyl-tRNA editing domain AM348_RS00645 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM348_RS00650 PF17185 NlpE C-terminal OB domain AM348_RS00650 PF04170 NlpE N-terminal domain AM348_RS00655 PF00472 RF-1 domain AM348_RS00660 PF07152 YaeQ protein AM348_RS00665 PF06786 Uncharacterised protein family (UPF0253) AM348_RS00670 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM348_RS00675 PF11734 TilS substrate C-terminal domain AM348_RS00675 PF09179 TilS substrate binding domain AM348_RS00675 PF01171 PP-loop family AM348_RS00680 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM348_RS00685 PF01276 Orn/Lys/Arg decarboxylase, major domain AM348_RS00685 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM348_RS00685 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM348_RS00690 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM348_RS00695 PF01336 OB-fold nucleic acid binding domain AM348_RS00695 PF02811 PHP domain AM348_RS00695 PF14579 Helix-hairpin-helix motif AM348_RS00695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM348_RS00695 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM348_RS00700 PF01351 Ribonuclease HII AM348_RS00705 PF02684 Lipid-A-disaccharide synthetase AM348_RS00710 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS00710 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM348_RS00715 PF07977 FabA-like domain AM348_RS00720 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS00720 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM348_RS00725 PF03938 Outer membrane protein (OmpH-like) AM348_RS00730 PF01103 Surface antigen AM348_RS00730 PF07244 Surface antigen variable number repeat AM348_RS00735 PF17820 PDZ domain AM348_RS00735 PF02163 Peptidase family M50 AM348_RS00745 PF01255 Putative undecaprenyl diphosphate synthase AM348_RS00750 PF13288 DXP reductoisomerase C-terminal domain AM348_RS00750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM348_RS00750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM348_RS00760 PF01765 Ribosome recycling factor AM348_RS00765 PF00696 Amino acid kinase family AM348_RS00770 PF00889 Elongation factor TS AM348_RS00775 PF00318 Ribosomal protein S2 AM348_RS00780 PF00557 Metallopeptidase family M24 AM348_RS00785 PF01909 Nucleotidyltransferase domain AM348_RS00785 PF01966 HD domain AM348_RS00785 PF01842 ACT domain AM348_RS00785 PF08335 GlnD PII-uridylyltransferase AM348_RS00790 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM348_RS00790 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS00790 PF14602 Hexapeptide repeat of succinyl-transferase AM348_RS00795 PF11944 Protein of unknown function (DUF3461) AM348_RS00800 PF05651 Putative sugar diacid recognition AM348_RS00800 PF17853 GGDEF-like domain AM348_RS00800 PF13556 PucR C-terminal helix-turn-helix domain AM348_RS00805 PF00595 PDZ domain AM348_RS00815 PF13286 Phosphohydrolase-associated domain AM348_RS00815 PF01966 HD domain AM348_RS00820 PF01048 Phosphorylase superfamily AM348_RS00825 PF01497 Periplasmic binding protein AM348_RS00830 PF03458 UPF0126 domain AM348_RS00835 PF01521 Iron-sulphur cluster biosynthesis AM348_RS00840 PF00654 Voltage gated chloride channel AM348_RS00845 PF00202 Aminotransferase class-III AM348_RS00850 PF01032 FecCD transport family AM348_RS00855 PF01497 Periplasmic binding protein AM348_RS00860 PF00005 ABC transporter AM348_RS00865 PF00593 TonB dependent receptor AM348_RS00865 PF07715 TonB-dependent Receptor Plug Domain AM348_RS00875 PF13954 PapC N-terminal domain AM348_RS00875 PF13953 PapC C-terminal domain AM348_RS00875 PF00577 Outer membrane usher protein AM348_RS00880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS00880 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS00890 PF14814 Bifunctional transglycosylase second domain AM348_RS00890 PF00905 Penicillin binding protein transpeptidase domain AM348_RS00890 PF00912 Transglycosylase AM348_RS00890 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM348_RS00895 PF00270 DEAD/DEAH box helicase AM348_RS00895 PF04408 Helicase associated domain (HA2) AM348_RS00895 PF00271 Helicase conserved C-terminal domain AM348_RS00895 PF08482 ATP-dependent helicase C-terminal AM348_RS00900 PF02834 LigT like Phosphoesterase AM348_RS00905 PF17746 SfsA N-terminal OB domain AM348_RS00905 PF03749 Sugar fermentation stimulation protein RE domain AM348_RS00910 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM348_RS00915 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM348_RS00920 PF12627 Probable RNA and SrmB- binding site of polymerase A AM348_RS00920 PF12626 Polymerase A arginine-rich C-terminus AM348_RS00920 PF01743 Poly A polymerase head domain AM348_RS00925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM348_RS00935 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS00935 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS00940 PF13953 PapC C-terminal domain AM348_RS00940 PF13954 PapC N-terminal domain AM348_RS00940 PF00577 Outer membrane usher protein AM348_RS00945 PF00419 Fimbrial protein AM348_RS00950 PF00419 Fimbrial protein AM348_RS00965 PF02548 Ketopantoate hydroxymethyltransferase AM348_RS00970 PF02569 Pantoate-beta-alanine ligase AM348_RS00975 PF02261 Aspartate decarboxylase AM348_RS00980 PF01522 Polysaccharide deacetylase AM348_RS00985 PF03610 PTS system fructose IIA component AM348_RS00990 PF01061 ABC-2 type transporter AM348_RS00995 PF00005 ABC transporter AM348_RS01000 PF00484 Carbonic anhydrase AM348_RS01005 PF00156 Phosphoribosyl transferase domain AM348_RS01010 PF01011 PQQ enzyme repeat AM348_RS01020 PF00394 Multicopper oxidase AM348_RS01020 PF07731 Multicopper oxidase AM348_RS01020 PF07732 Multicopper oxidase AM348_RS01025 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM348_RS01030 PF08220 DeoR-like helix-turn-helix domain AM348_RS01030 PF00455 DeoR C terminal sensor domain AM348_RS01035 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM348_RS01040 PF07005 Sugar-binding N-terminal domain AM348_RS01040 PF17042 Nucleotide-binding C-terminal domain AM348_RS01045 PF03812 2-keto-3-deoxygluconate permease AM348_RS01050 PF06062 Uncharacterised protein family (UPF0231) AM348_RS01055 PF11791 Aconitate B N-terminal domain AM348_RS01055 PF06434 Aconitate hydratase 2 N-terminus AM348_RS01055 PF00330 Aconitase family (aconitate hydratase) AM348_RS01070 PF11737 Protein of unknown function (DUF3300) AM348_RS01080 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM348_RS01080 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS01085 PF00364 Biotin-requiring enzyme AM348_RS01085 PF02817 e3 binding domain AM348_RS01085 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM348_RS01090 PF00456 Transketolase, thiamine diphosphate binding domain AM348_RS01090 PF17831 Pyruvate dehydrogenase E1 component middle domain AM348_RS01095 PF07729 FCD domain AM348_RS01095 PF00392 Bacterial regulatory proteins, gntR family AM348_RS01100 PF00324 Amino acid permease AM348_RS01110 PF04616 Glycosyl hydrolases family 43 AM348_RS01110 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AM348_RS01115 PF17113 Regulatory signalling modulator protein AmpE AM348_RS01120 PF01510 N-acetylmuramoyl-L-alanine amidase AM348_RS01125 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM348_RS01125 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM348_RS01130 PF07963 Prokaryotic N-terminal methylation motif AM348_RS01135 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM348_RS01135 PF00437 Type II/IV secretion system protein AM348_RS01140 PF00482 Type II secretion system (T2SS), protein F AM348_RS01145 PF00478 IMP dehydrogenase / GMP reductase domain AM348_RS01150 PF01121 Dephospho-CoA kinase AM348_RS01155 PF07072 Cell division protein AM348_RS01160 PF03884 DNA gyrase inhibitor YacG AM348_RS01165 PF00293 NUDIX domain AM348_RS01170 PF07516 SecA Wing and Scaffold domain AM348_RS01170 PF01043 SecA preprotein cross-linking domain AM348_RS01170 PF02810 SEC-C motif AM348_RS01170 PF07517 SecA DEAD-like domain AM348_RS01175 PF06558 Secretion monitor precursor protein (SecM) AM348_RS01180 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM348_RS01185 PF00091 Tubulin/FtsZ family, GTPase domain AM348_RS01185 PF12327 FtsZ family, C-terminal domain AM348_RS01190 PF02491 SHS2 domain inserted in FTSA AM348_RS01195 PF08478 POTRA domain, FtsQ-type AM348_RS01195 PF03799 Cell division protein FtsQ AM348_RS01200 PF07478 D-ala D-ala ligase C-terminus AM348_RS01200 PF01820 D-ala D-ala ligase N-terminus AM348_RS01205 PF01225 Mur ligase family, catalytic domain AM348_RS01205 PF02875 Mur ligase family, glutamate ligase domain AM348_RS01205 PF08245 Mur ligase middle domain AM348_RS01210 PF04101 Glycosyltransferase family 28 C-terminal domain AM348_RS01210 PF03033 Glycosyltransferase family 28 N-terminal domain AM348_RS01215 PF01098 Cell cycle protein AM348_RS01220 PF02875 Mur ligase family, glutamate ligase domain AM348_RS01220 PF08245 Mur ligase middle domain AM348_RS01225 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM348_RS01225 PF00953 Glycosyl transferase family 4 AM348_RS01230 PF08245 Mur ligase middle domain AM348_RS01230 PF02875 Mur ligase family, glutamate ligase domain AM348_RS01230 PF01225 Mur ligase family, catalytic domain AM348_RS01235 PF08245 Mur ligase middle domain AM348_RS01235 PF02875 Mur ligase family, glutamate ligase domain AM348_RS01235 PF01225 Mur ligase family, catalytic domain AM348_RS01240 PF03717 Penicillin-binding Protein dimerisation domain AM348_RS01240 PF00905 Penicillin binding protein transpeptidase domain AM348_RS01245 PF04999 Cell division protein FtsL AM348_RS01250 PF01795 MraW methylase family AM348_RS01255 PF02381 MraZ protein, putative antitoxin-like AM348_RS01265 PF00356 Bacterial regulatory proteins, lacI family AM348_RS01265 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM348_RS01270 PF10369 Small subunit of acetolactate synthase AM348_RS01275 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS01275 PF00205 Thiamine pyrophosphate enzyme, central domain AM348_RS01275 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS01280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS01280 PF03466 LysR substrate binding domain AM348_RS01285 PF08054 Leucine operon leader peptide AM348_RS01290 PF08502 LeuA allosteric (dimerisation) domain AM348_RS01290 PF00682 HMGL-like AM348_RS01295 PF00180 Isocitrate/isopropylmalate dehydrogenase AM348_RS01300 PF00330 Aconitase family (aconitate hydratase) AM348_RS01305 PF00694 Aconitase C-terminal domain AM348_RS01310 PF00356 Bacterial regulatory proteins, lacI family AM348_RS01315 PF07690 Major Facilitator Superfamily AM348_RS01320 PF00106 short chain dehydrogenase AM348_RS01325 PF07690 Major Facilitator Superfamily AM348_RS01335 PF12793 Sugar transport-related sRNA regulator N-term AM348_RS01335 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS01350 PF00005 ABC transporter AM348_RS01355 PF09335 SNARE associated Golgi protein AM348_RS01360 PF12833 Helix-turn-helix domain AM348_RS01360 PF02311 AraC-like ligand binding domain AM348_RS01365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS01370 PF02610 L-arabinose isomerase AM348_RS01370 PF11762 L-arabinose isomerase C-terminal domain AM348_RS01375 PF00596 Class II Aldolase and Adducin N-terminal domain AM348_RS01385 PF00136 DNA polymerase family B AM348_RS01385 PF03104 DNA polymerase family B, exonuclease domain AM348_RS01390 PF00271 Helicase conserved C-terminal domain AM348_RS01390 PF18337 RapA N-terminal Tudor like domain AM348_RS01390 PF18339 RapA N-terminal Tudor like domain 1 AM348_RS01390 PF00176 SNF2 family N-terminal domain AM348_RS01390 PF12137 RNA polymerase recycling family C-terminal AM348_RS01395 PF00849 RNA pseudouridylate synthase AM348_RS01400 PF05099 Tellurite resistance protein TerB AM348_RS01400 PF00226 DnaJ domain AM348_RS01410 PF03968 OstA-like protein AM348_RS01410 PF04453 LPS transport system D AM348_RS01415 PF09312 SurA N-terminal domain AM348_RS01415 PF00639 PPIC-type PPIASE domain AM348_RS01420 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM348_RS01425 PF00398 Ribosomal RNA adenine dimethylase AM348_RS01430 PF04379 ApaG domain AM348_RS01435 PF00149 Calcineurin-like phosphoesterase AM348_RS01440 PF00186 Dihydrofolate reductase AM348_RS01450 PF00999 Sodium/hydrogen exchanger family AM348_RS01450 PF02254 TrkA-N domain AM348_RS01455 PF02525 Flavodoxin-like fold AM348_RS01460 PF06004 Bacterial protein of unknown function (DUF903) AM348_RS01465 PF00083 Sugar (and other) transporter AM348_RS01475 PF01494 FAD binding domain AM348_RS01480 PF01012 Electron transfer flavoprotein domain AM348_RS01480 PF00766 Electron transfer flavoprotein FAD-binding domain AM348_RS01485 PF01012 Electron transfer flavoprotein domain AM348_RS01495 PF02028 BCCT, betaine/carnitine/choline family transporter AM348_RS01500 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM348_RS01500 PF02770 Acyl-CoA dehydrogenase, middle domain AM348_RS01500 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM348_RS01505 PF02515 CoA-transferase family III AM348_RS01510 PF13193 AMP-binding enzyme C-terminal domain AM348_RS01510 PF00501 AMP-binding enzyme AM348_RS01515 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS01520 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS01525 PF07180 CaiF/GrlA transcriptional regulator AM348_RS01530 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM348_RS01530 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM348_RS01530 PF02142 MGS-like domain AM348_RS01535 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM348_RS01535 PF00117 Glutamine amidotransferase class-I AM348_RS01540 PF05173 Dihydrodipicolinate reductase, C-terminus AM348_RS01540 PF01113 Dihydrodipicolinate reductase, N-terminus AM348_RS01545 PF01411 tRNA synthetases class II (A) AM348_RS01545 PF02272 DHHA1 domain AM348_RS01545 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM348_RS01550 PF03466 LysR substrate binding domain AM348_RS01550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS01555 PF01156 Inosine-uridine preferring nucleoside hydrolase AM348_RS01560 PF02401 LytB protein AM348_RS01565 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM348_RS01570 PF01252 Signal peptidase (SPase) II AM348_RS01575 PF08264 Anticodon-binding domain of tRNA AM348_RS01575 PF06827 Zinc finger found in FPG and IleRS AM348_RS01575 PF00133 tRNA synthetases class I (I, L, M and V) AM348_RS01580 PF06574 FAD synthetase AM348_RS01580 PF01687 Riboflavin kinase AM348_RS01590 PF01649 Ribosomal protein S20 AM348_RS01600 PF01055 Glycosyl hydrolases family 31 AM348_RS01605 PF03466 LysR substrate binding domain AM348_RS01605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS01610 PF06965 Na+/H+ antiporter 1 AM348_RS01615 PF00226 DnaJ domain AM348_RS01615 PF01556 DnaJ C terminal domain AM348_RS01615 PF00684 DnaJ central domain AM348_RS01620 PF00012 Hsp70 protein AM348_RS01630 PF10807 Protein of unknown function (DUF2541) AM348_RS01635 PF01184 GPR1/FUN34/yaaH family AM348_RS01640 PF07690 Major Facilitator Superfamily AM348_RS01645 PF00994 Probable molybdopterin binding domain AM348_RS01650 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM348_RS01655 PF01235 Sodium:alanine symporter family AM348_RS01660 PF03883 Peroxide stress protein YaaA AM348_RS01665 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS01665 PF14821 Threonine synthase N terminus AM348_RS01670 PF08544 GHMP kinases C terminal AM348_RS01670 PF00288 GHMP kinases N terminal domain AM348_RS01675 PF00696 Amino acid kinase family AM348_RS01675 PF00742 Homoserine dehydrogenase AM348_RS01675 PF13840 ACT domain AM348_RS01675 PF03447 Homoserine dehydrogenase, NAD binding domain AM348_RS01675 PF01842 ACT domain AM348_RS01685 PF00588 SpoU rRNA Methylase family AM348_RS01695 PF00072 Response regulator receiver domain AM348_RS01695 PF00486 Transcriptional regulatory protein, C terminal AM348_RS01700 PF06123 Inner membrane protein CreD AM348_RS01705 PF00672 HAMP domain AM348_RS01705 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS01705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS01710 PF00486 Transcriptional regulatory protein, C terminal AM348_RS01710 PF00072 Response regulator receiver domain AM348_RS01715 PF05981 CreA protein AM348_RS01720 PF06445 GyrI-like small molecule binding domain AM348_RS01720 PF12833 Helix-turn-helix domain AM348_RS01725 PF00300 Histidine phosphatase superfamily (branch 1) AM348_RS01730 PF01931 Protein of unknown function DUF84 AM348_RS01735 PF01371 Trp repressor protein AM348_RS01740 PF14718 Soluble lytic murein transglycosylase L domain AM348_RS01740 PF01464 Transglycosylase SLT domain AM348_RS01745 PF00005 ABC transporter AM348_RS01745 PF12848 ABC transporter AM348_RS01750 PF13521 AAA domain AM348_RS01750 PF01381 Helix-turn-helix AM348_RS01755 PF18073 Rubredoxin metal binding domain AM348_RS01760 PF18429 Domain of unknown function (DUF5609) AM348_RS01770 PF10144 Bacterial virulence factor haemolysin AM348_RS01775 PF03099 Biotin/lipoate A/B protein ligase family AM348_RS01775 PF10437 Bacterial lipoate protein ligase C-terminus AM348_RS01780 PF01048 Phosphorylase superfamily AM348_RS01785 PF01676 Metalloenzyme superfamily AM348_RS01790 PF02885 Glycosyl transferase family, helical bundle domain AM348_RS01790 PF00591 Glycosyl transferase family, a/b domain AM348_RS01790 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM348_RS01795 PF01791 DeoC/LacD family aldolase AM348_RS01800 PF11230 Protein of unknown function (DUF3029) AM348_RS01805 PF04055 Radical SAM superfamily AM348_RS01810 PF01026 TatD related DNase AM348_RS01815 PF01734 Patatin-like phospholipase AM348_RS01820 PF07043 Protein of unknown function (DUF1328) AM348_RS01825 PF04972 BON domain AM348_RS01830 PF03144 Elongation factor Tu domain 2 AM348_RS01830 PF16658 Class II release factor RF3, C-terminal domain AM348_RS01830 PF00009 Elongation factor Tu GTP binding domain AM348_RS01835 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS01840 PF00583 Acetyltransferase (GNAT) family AM348_RS01845 PF03603 DNA polymerase III psi subunit AM348_RS01850 PF08468 Methyltransferase small domain N-terminal AM348_RS01850 PF05175 Methyltransferase small domain AM348_RS01870 PF07256 Protein of unknown function (DUF1435) AM348_RS01875 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS01875 PF05230 MASE2 domain AM348_RS01880 PF11575 FhuF 2Fe-2S C-terminal domain AM348_RS01880 PF06276 Ferric iron reductase FhuF-like transporter AM348_RS01885 PF02378 Phosphotransferase system, EIIC AM348_RS01890 PF04073 Aminoacyl-tRNA editing domain AM348_RS01895 PF00196 Bacterial regulatory proteins, luxR family AM348_RS01900 PF00196 Bacterial regulatory proteins, luxR family AM348_RS01905 PF06738 Putative threonine/serine exporter AM348_RS01910 PF12821 Threonine/Serine exporter, ThrE AM348_RS01915 PF17948 DnaT DNA-binding domain AM348_RS01920 PF01695 IstB-like ATP binding protein AM348_RS01925 PF10696 Protein of unknown function (DUF2501) AM348_RS01930 PF00884 Sulfatase AM348_RS01935 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS01935 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS01940 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS01940 PF00107 Zinc-binding dehydrogenase AM348_RS01945 PF00392 Bacterial regulatory proteins, gntR family AM348_RS01945 PF07729 FCD domain AM348_RS01950 PF07690 Major Facilitator Superfamily AM348_RS01955 PF00583 Acetyltransferase (GNAT) family AM348_RS01960 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS01960 PF00672 HAMP domain AM348_RS01960 PF02203 Tar ligand binding domain homologue AM348_RS01965 PF02554 Carbon starvation protein CstA AM348_RS01965 PF13722 5TM C-terminal transporter carbon starvation CstA AM348_RS01970 PF04328 Selenoprotein, putative AM348_RS01975 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM348_RS01975 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM348_RS01985 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS01985 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS01995 PF06568 Domain of unknown function (DUF1127) AM348_RS02000 PF00392 Bacterial regulatory proteins, gntR family AM348_RS02000 PF00155 Aminotransferase class I and II AM348_RS02020 PF07690 Major Facilitator Superfamily AM348_RS02025 PF01053 Cys/Met metabolism PLP-dependent enzyme AM348_RS02030 PF00375 Sodium:dicarboxylate symporter family AM348_RS02035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS02035 PF03466 LysR substrate binding domain AM348_RS02040 PF04286 Protein of unknown function (DUF445) AM348_RS02050 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AM348_RS02055 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM348_RS02060 PF11823 Protein of unknown function (DUF3343) AM348_RS02065 PF06779 Uncharacterised MFS-type transporter YbfB AM348_RS02075 PF00267 Gram-negative porin AM348_RS02085 PF07729 FCD domain AM348_RS02085 PF00392 Bacterial regulatory proteins, gntR family AM348_RS02090 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS02090 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS02095 PF03786 D-mannonate dehydratase (UxuA) AM348_RS02100 PF02447 GntP family permease AM348_RS02105 PF02589 LUD domain AM348_RS02110 PF11870 Domain of unknown function (DUF3390) AM348_RS02110 PF13183 4Fe-4S dicluster domain AM348_RS02110 PF02589 LUD domain AM348_RS02115 PF02754 Cysteine-rich domain AM348_RS02120 PF02652 L-lactate permease AM348_RS02125 PF08543 Phosphomethylpyrimidine kinase AM348_RS02130 PF03222 Tryptophan/tyrosine permease family AM348_RS02135 PF01212 Beta-eliminating lyase AM348_RS02140 PF02615 Malate/L-lactate dehydrogenase AM348_RS02145 PF13520 Amino acid permease AM348_RS02150 PF00171 Aldehyde dehydrogenase family AM348_RS02155 PF00701 Dihydrodipicolinate synthetase family AM348_RS02170 PF05544 Proline racemase AM348_RS02175 PF01266 FAD dependent oxidoreductase AM348_RS02175 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM348_RS02185 PF04324 BFD-like [2Fe-2S] binding domain AM348_RS02185 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS02205 PF01555 DNA methylase AM348_RS02210 PF14562 Restriction endonuclease BglI AM348_RS02240 PF02463 RecF/RecN/SMC N terminal domain AM348_RS02255 PF01381 Helix-turn-helix AM348_RS02260 PF01381 Helix-turn-helix AM348_RS02265 PF13693 Winged helix-turn-helix DNA-binding AM348_RS02270 PF03608 PTS system enzyme II sorbitol-specific factor AM348_RS02280 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM348_RS02280 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM348_RS02285 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS02285 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM348_RS02345 PF13356 Arm DNA-binding domain AM348_RS02345 PF00589 Phage integrase family AM348_RS02355 PF00107 Zinc-binding dehydrogenase AM348_RS02355 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS02360 PF05872 Bacterial protein of unknown function (DUF853) AM348_RS02365 PF03739 Lipopolysaccharide export system permease LptF/LptG AM348_RS02370 PF03739 Lipopolysaccharide export system permease LptF/LptG AM348_RS02380 PF02789 Cytosol aminopeptidase family, N-terminal domain AM348_RS02380 PF00883 Cytosol aminopeptidase family, catalytic domain AM348_RS02385 PF04364 DNA polymerase III chi subunit, HolC AM348_RS02390 PF10458 Valyl tRNA synthetase tRNA binding arm AM348_RS02390 PF00133 tRNA synthetases class I (I, L, M and V) AM348_RS02390 PF08264 Anticodon-binding domain of tRNA AM348_RS02395 PF00583 Acetyltransferase (GNAT) family AM348_RS02405 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) AM348_RS02410 PF06877 Regulator of ribonuclease activity B AM348_RS02415 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM348_RS02415 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM348_RS02420 PF04074 YhcH/YjgK/YiaL AM348_RS02430 PF08052 PyrBI operon leader peptide AM348_RS02435 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM348_RS02435 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM348_RS02440 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM348_RS02440 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM348_RS02445 PF01042 Endoribonuclease L-PSP AM348_RS02465 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM348_RS02475 PF03480 Bacterial extracellular solute-binding protein, family 7 AM348_RS02480 PF00689 Cation transporting ATPase, C-terminus AM348_RS02480 PF00690 Cation transporter/ATPase, N-terminus AM348_RS02490 PF00356 Bacterial regulatory proteins, lacI family AM348_RS02495 PF00367 phosphotransferase system, EIIB AM348_RS02495 PF02378 Phosphotransferase system, EIIC AM348_RS02500 PF11941 Domain of unknown function (DUF3459) AM348_RS02500 PF00128 Alpha amylase, catalytic domain AM348_RS02505 PF03477 ATP cone domain AM348_RS02505 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM348_RS02515 PF08279 HTH domain AM348_RS02515 PF00874 PRD domain AM348_RS02515 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS02515 PF05043 Mga helix-turn-helix domain AM348_RS02520 PF07071 KDGP aldolase AM348_RS02525 PF03841 L-seryl-tRNA selenium transferase AM348_RS02530 PF01979 Amidohydrolase family AM348_RS02560 PF07361 Cytochrome b562 AM348_RS02565 PF01523 Putative modulator of DNA gyrase AM348_RS02570 PF04751 Protein of unknown function (DUF615) AM348_RS02575 PF08245 Mur ligase middle domain AM348_RS02575 PF01225 Mur ligase family, catalytic domain AM348_RS02575 PF02875 Mur ligase family, glutamate ligase domain AM348_RS02585 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM348_RS02590 PF00672 HAMP domain AM348_RS02590 PF02203 Tar ligand binding domain homologue AM348_RS02590 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS02595 PF02653 Branched-chain amino acid transport system / permease component AM348_RS02600 PF02653 Branched-chain amino acid transport system / permease component AM348_RS02605 PF00005 ABC transporter AM348_RS02610 PF13407 Periplasmic binding protein domain AM348_RS02615 PF00719 Inorganic pyrophosphatase AM348_RS02635 PF05638 Type VI secretion system effector, Hcp AM348_RS02645 PF07715 TonB-dependent Receptor Plug Domain AM348_RS02645 PF00593 TonB dependent receptor AM348_RS02650 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM348_RS02655 PF04357 TamB, inner membrane protein subunit of TAM complex AM348_RS02660 PF01103 Surface antigen AM348_RS02660 PF07244 Surface antigen variable number repeat AM348_RS02660 PF17243 POTRA domain TamA domain 1 AM348_RS02665 PF01625 Peptide methionine sulfoxide reductase AM348_RS02670 PF00571 CBS domain AM348_RS02670 PF03471 Transporter associated domain AM348_RS02670 PF01595 Cyclin M transmembrane N-terminal domain AM348_RS02675 PF06526 Protein of unknown function (DUF1107) AM348_RS02685 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM348_RS02690 PF00459 Inositol monophosphatase family AM348_RS02695 PF00149 Calcineurin-like phosphoesterase AM348_RS02695 PF02872 5'-nucleotidase, C-terminal domain AM348_RS02700 PF01638 HxlR-like helix-turn-helix AM348_RS02705 PF05368 NmrA-like family AM348_RS02715 PF00892 EamA-like transporter family AM348_RS02720 PF00672 HAMP domain AM348_RS02720 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS02720 PF02203 Tar ligand binding domain homologue AM348_RS02725 PF01814 Hemerythrin HHE cation binding domain AM348_RS02725 PF04405 Domain of Unknown function (DUF542) AM348_RS02730 PF00324 Amino acid permease AM348_RS02735 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM348_RS02735 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM348_RS02740 PF04225 Opacity-associated protein A LysM-like domain AM348_RS02740 PF08525 Opacity-associated protein A N-terminal motif AM348_RS02750 PF01281 Ribosomal protein L9, N-terminal domain AM348_RS02750 PF03948 Ribosomal protein L9, C-terminal domain AM348_RS02755 PF01084 Ribosomal protein S18 AM348_RS02760 PF00436 Single-strand binding protein family AM348_RS02765 PF01250 Ribosomal protein S6 AM348_RS02770 PF01925 Sulfite exporter TauE/SafE AM348_RS02775 PF07338 Protein of unknown function (DUF1471) AM348_RS02780 PF00596 Class II Aldolase and Adducin N-terminal domain AM348_RS02785 PF01261 Xylose isomerase-like TIM barrel AM348_RS02790 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM348_RS02795 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS02800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS02805 PF03611 PTS system sugar-specific permease component AM348_RS02815 PF08220 DeoR-like helix-turn-helix domain AM348_RS02815 PF00455 DeoR C terminal sensor domain AM348_RS02820 PF00326 Prolyl oligopeptidase family AM348_RS02825 PF07338 Protein of unknown function (DUF1471) AM348_RS02830 PF07338 Protein of unknown function (DUF1471) AM348_RS02835 PF18158 Adaptive response protein AidB N-terminal domain AM348_RS02835 PF02770 Acyl-CoA dehydrogenase, middle domain AM348_RS02835 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM348_RS02840 PF00588 SpoU rRNA Methylase family AM348_RS02840 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM348_RS02845 PF08206 Ribonuclease B OB domain AM348_RS02845 PF08461 Ribonuclease R winged-helix domain AM348_RS02845 PF17876 Cold shock domain AM348_RS02845 PF00773 RNB domain AM348_RS02845 PF00575 S1 RNA binding domain AM348_RS02850 PF02082 Transcriptional regulator AM348_RS02860 PF00709 Adenylosuccinate synthetase AM348_RS02865 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM348_RS02870 PF01145 SPFH domain / Band 7 family AM348_RS02875 PF01145 SPFH domain / Band 7 family AM348_RS02875 PF12221 Bacterial membrane protein N terminal AM348_RS02880 PF13167 GTP-binding GTPase N-terminal AM348_RS02880 PF01926 50S ribosome-binding GTPase AM348_RS02880 PF16360 GTP-binding GTPase Middle Region AM348_RS02885 PF17209 Hfq protein AM348_RS02895 PF08676 MutL C terminal dimerisation domain AM348_RS02895 PF01119 DNA mismatch repair protein, C-terminal domain AM348_RS02900 PF01520 N-acetylmuramoyl-L-alanine amidase AM348_RS02905 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM348_RS02910 PF01256 Carbohydrate kinase AM348_RS02910 PF03853 YjeF-related protein N-terminus AM348_RS02915 PF08331 Domain of unknown function (DUF1730) AM348_RS02935 PF00929 Exonuclease AM348_RS02940 PF03193 RsgA GTPase AM348_RS02945 PF02666 Phosphatidylserine decarboxylase AM348_RS02950 PF12795 Mechanosensitive ion channel porin domain AM348_RS02950 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM348_RS02950 PF00924 Mechanosensitive ion channel AM348_RS02955 PF13520 Amino acid permease AM348_RS02960 PF00152 tRNA synthetases class II (D, K and N) AM348_RS02965 PF00890 FAD binding domain AM348_RS02965 PF02910 Fumarate reductase flavoprotein C-term AM348_RS02970 PF13085 2Fe-2S iron-sulfur cluster binding domain AM348_RS02970 PF13183 4Fe-4S dicluster domain AM348_RS02975 PF02300 Fumarate reductase subunit C AM348_RS02980 PF02313 Fumarate reductase subunit D AM348_RS02985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS02985 PF03466 LysR substrate binding domain AM348_RS02990 PF00144 Beta-lactamase AM348_RS02995 PF08212 Lipocalin-like domain AM348_RS03000 PF00893 Small Multidrug Resistance protein AM348_RS03005 PF00196 Bacterial regulatory proteins, luxR family AM348_RS03010 PF08085 Entericidin EcnA/B family AM348_RS03015 PF08085 Entericidin EcnA/B family AM348_RS03020 PF01132 Elongation factor P (EF-P) OB domain AM348_RS03020 PF09285 Elongation factor P, C-terminal AM348_RS03020 PF08207 Elongation factor P (EF-P) KOW-like domain AM348_RS03025 PF04055 Radical SAM superfamily AM348_RS03030 PF15922 YjeJ-like AM348_RS03035 PF13698 Domain of unknown function (DUF4156) AM348_RS03040 PF00118 TCP-1/cpn60 chaperonin family AM348_RS03045 PF00166 Chaperonin 10 Kd subunit AM348_RS03050 PF13520 Amino acid permease AM348_RS03055 PF04186 FxsA cytoplasmic membrane protein AM348_RS03060 PF10415 Fumarase C C-terminus AM348_RS03060 PF00206 Lyase AM348_RS03065 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM348_RS03070 PF03091 CutA1 divalent ion tolerance protein AM348_RS03075 PF02683 Cytochrome C biogenesis protein transmembrane region AM348_RS03075 PF11412 Disulphide bond corrector protein DsbC AM348_RS03095 PF00501 AMP-binding enzyme AM348_RS03095 PF13193 AMP-binding enzyme C-terminal domain AM348_RS03130 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM348_RS03130 PF17203 Single cache domain 3 AM348_RS03130 PF00989 PAS fold AM348_RS03130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS03135 PF00072 Response regulator receiver domain AM348_RS03140 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM348_RS03145 PF05683 Fumarase C-terminus AM348_RS03145 PF05681 Fumarate hydratase (Fumerase) AM348_RS03150 PF09997 Predicted membrane protein (DUF2238) AM348_RS03155 PF04193 PQ loop repeat AM348_RS03165 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM348_RS03165 PF02056 Family 4 glycosyl hydrolase AM348_RS03170 PF12833 Helix-turn-helix domain AM348_RS03175 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM348_RS03175 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM348_RS03175 PF01276 Orn/Lys/Arg decarboxylase, major domain AM348_RS03180 PF12833 Helix-turn-helix domain AM348_RS03185 PF13520 Amino acid permease AM348_RS03190 PF08019 Phosphoethanolamine transferase EptA/EptB AM348_RS03190 PF00884 Sulfatase AM348_RS03195 PF00486 Transcriptional regulatory protein, C terminal AM348_RS03195 PF00072 Response regulator receiver domain AM348_RS03200 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS03200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS03210 PF00083 Sugar (and other) transporter AM348_RS03210 PF08946 Osmosensory transporter coiled coil AM348_RS03215 PF03812 2-keto-3-deoxygluconate permease AM348_RS03220 PF13990 YjcZ-like protein AM348_RS03225 PF00350 Dynamin family AM348_RS03235 PF03831 PhnA domain AM348_RS03235 PF08274 PhnA Zinc-Ribbon AM348_RS03240 PF06983 3-demethylubiquinone-9 3-methyltransferase AM348_RS03245 PF00005 ABC transporter AM348_RS03255 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS03260 PF00392 Bacterial regulatory proteins, gntR family AM348_RS03260 PF07702 UTRA domain AM348_RS03265 PF06754 Phosphonate metabolism protein PhnG AM348_RS03270 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM348_RS03275 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM348_RS03280 PF06007 Phosphonate metabolism protein PhnJ AM348_RS03285 PF00005 ABC transporter AM348_RS03290 PF00005 ABC transporter AM348_RS03295 PF07969 Amidohydrolase family AM348_RS03305 PF00583 Acetyltransferase (GNAT) family AM348_RS03310 PF12706 Beta-lactamase superfamily domain AM348_RS03315 PF01381 Helix-turn-helix AM348_RS03330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS03330 PF00072 Response regulator receiver domain AM348_RS03330 PF13426 PAS domain AM348_RS03340 PF00005 ABC transporter AM348_RS03345 PF02653 Branched-chain amino acid transport system / permease component AM348_RS03350 PF13407 Periplasmic binding protein domain AM348_RS03360 PF01116 Fructose-bisphosphate aldolase class-II AM348_RS03370 PF00072 Response regulator receiver domain AM348_RS03370 PF00486 Transcriptional regulatory protein, C terminal AM348_RS03380 PF08238 Sel1 repeat AM348_RS03385 PF00375 Sodium:dicarboxylate symporter family AM348_RS03395 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM348_RS03395 PF01578 Cytochrome C assembly protein AM348_RS03400 PF03916 Polysulphide reductase, NrfD AM348_RS03405 PF00037 4Fe-4S binding domain AM348_RS03405 PF13247 4Fe-4S dicluster domain AM348_RS03410 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AM348_RS03410 PF13435 Cytochrome c554 and c-prime AM348_RS03415 PF02335 Cytochrome c552 AM348_RS03420 PF16177 Acetyl-coenzyme A synthetase N-terminus AM348_RS03420 PF00501 AMP-binding enzyme AM348_RS03420 PF13193 AMP-binding enzyme C-terminal domain AM348_RS03425 PF04341 Protein of unknown function, DUF485 AM348_RS03430 PF00474 Sodium:solute symporter family AM348_RS03435 PF04172 LrgB-like family AM348_RS03440 PF03788 LrgA family AM348_RS03445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS03445 PF03466 LysR substrate binding domain AM348_RS03450 PF00999 Sodium/hydrogen exchanger family AM348_RS03455 PF00860 Permease family AM348_RS03465 PF00376 MerR family regulatory protein AM348_RS03465 PF09278 MerR, DNA binding AM348_RS03470 PF12833 Helix-turn-helix domain AM348_RS03475 PF00563 EAL domain AM348_RS03475 PF12792 CSS motif domain associated with EAL AM348_RS03480 PF15940 Family of unknown function AM348_RS03485 PF00436 Single-strand binding protein family AM348_RS03495 PF17755 UvrA DNA-binding domain AM348_RS03495 PF17760 UvrA interaction domain AM348_RS03495 PF00005 ABC transporter AM348_RS03510 PF02371 Transposase IS116/IS110/IS902 family AM348_RS03510 PF01548 Transposase AM348_RS03520 PF04237 YjbR AM348_RS03525 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM348_RS03530 PF00155 Aminotransferase class I and II AM348_RS03535 PF00842 Alanine racemase, C-terminal domain AM348_RS03535 PF01168 Alanine racemase, N-terminal domain AM348_RS03540 PF03796 DnaB-like helicase C terminal domain AM348_RS03540 PF00772 DnaB-like helicase N terminal domain AM348_RS03545 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS03545 PF00107 Zinc-binding dehydrogenase AM348_RS03550 PF09583 Phage shock protein G (Phageshock_PspG) AM348_RS03555 PF01207 Dihydrouridine synthase (Dus) AM348_RS03565 PF01475 Ferric uptake regulator family AM348_RS03570 PF05532 CsbD-like AM348_RS03575 PF01554 MatE AM348_RS03580 PF00717 Peptidase S24-like AM348_RS03580 PF01726 LexA DNA binding domain AM348_RS03585 PF01219 Prokaryotic diacylglycerol kinase AM348_RS03590 PF01553 Acyltransferase AM348_RS03595 PF01040 UbiA prenyltransferase family AM348_RS03600 PF04345 Chorismate lyase AM348_RS03605 PF07148 Maltose operon periplasmic protein precursor (MalM) AM348_RS03610 PF02264 LamB porin AM348_RS03615 PF00005 ABC transporter AM348_RS03615 PF17912 MalK OB fold domain AM348_RS03620 PF01547 Bacterial extracellular solute-binding protein AM348_RS03625 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS03625 PF14785 Maltose transport system permease protein MalF P2 domain AM348_RS03630 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS03635 PF00083 Sugar (and other) transporter AM348_RS03640 PF06146 Phosphate-starvation-inducible E AM348_RS03645 PF06082 Exopolysaccharide biosynthesis protein YbjH AM348_RS03650 PF06251 Capsule biosynthesis GfcC AM348_RS03655 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM348_RS03660 PF11106 Exopolysaccharide production protein YjbE AM348_RS03665 PF00342 Phosphoglucose isomerase AM348_RS03675 PF00696 Amino acid kinase family AM348_RS03675 PF01842 ACT domain AM348_RS03680 PF01758 Sodium Bile acid symporter family AM348_RS03700 PF00455 DeoR C terminal sensor domain AM348_RS03700 PF08220 DeoR-like helix-turn-helix domain AM348_RS03705 PF11656 YjbD family (DUF3811) AM348_RS03710 PF00849 RNA pseudouridylate synthase AM348_RS03710 PF01479 S4 domain AM348_RS03715 PF13936 Helix-turn-helix domain AM348_RS03715 PF04198 Putative sugar-binding domain AM348_RS03720 PF00106 short chain dehydrogenase AM348_RS03725 PF03610 PTS system fructose IIA component AM348_RS03730 PF03830 PTS system sorbose subfamily IIB component AM348_RS03735 PF03609 PTS system sorbose-specific iic component AM348_RS03740 PF03613 PTS system mannose/fructose/sorbose family IID component AM348_RS03745 PF00107 Zinc-binding dehydrogenase AM348_RS03745 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS03750 PF08501 Shikimate dehydrogenase substrate binding domain AM348_RS03780 PF05973 Phage derived protein Gp49-like (DUF891) AM348_RS03785 PF01381 Helix-turn-helix AM348_RS03790 PF03575 Peptidase family S51 AM348_RS03795 PF02690 Na+/Pi-cotransporter AM348_RS03800 PF02310 B12 binding domain AM348_RS03800 PF00809 Pterin binding enzyme AM348_RS03800 PF02607 B12 binding domain AM348_RS03800 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM348_RS03800 PF02574 Homocysteine S-methyltransferase AM348_RS03805 PF01614 Bacterial transcriptional regulator AM348_RS03805 PF09339 IclR helix-turn-helix domain AM348_RS03810 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM348_RS03815 PF00463 Isocitrate lyase family AM348_RS03820 PF01274 Malate synthase AM348_RS03825 PF04204 Homoserine O-succinyltransferase AM348_RS03830 PF13673 Acetyltransferase (GNAT) domain AM348_RS03865 PF02142 MGS-like domain AM348_RS03865 PF01808 AICARFT/IMPCHase bienzyme AM348_RS03870 PF02844 Phosphoribosylglycinamide synthetase, N domain AM348_RS03870 PF02843 Phosphoribosylglycinamide synthetase, C domain AM348_RS03870 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM348_RS03875 PF02954 Bacterial regulatory protein, Fis family AM348_RS03875 PF00158 Sigma-54 interaction domain AM348_RS03875 PF00072 Response regulator receiver domain AM348_RS03880 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS03880 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS03885 PF13801 Heavy-metal resistance AM348_RS03890 PF07356 Protein of unknown function (DUF1481) AM348_RS03895 PF00216 Bacterial DNA-binding protein AM348_RS03900 PF04222 Protein of unknown function (DUF416) AM348_RS03905 PF04493 Endonuclease V AM348_RS03910 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM348_RS03915 PF09297 NADH pyrophosphatase zinc ribbon domain AM348_RS03915 PF00293 NUDIX domain AM348_RS03920 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM348_RS03925 PF13667 ThiC-associated domain AM348_RS03925 PF01964 Radical SAM ThiC family AM348_RS03930 PF02581 Thiamine monophosphate synthase AM348_RS03935 PF00899 ThiF family AM348_RS03940 PF02597 ThiS family AM348_RS03945 PF05690 Thiazole biosynthesis protein ThiG AM348_RS03950 PF04055 Radical SAM superfamily AM348_RS03950 PF06968 Biotin and Thiamin Synthesis associated domain AM348_RS03955 PF00313 'Cold-shock' DNA-binding domain AM348_RS03960 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS03965 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM348_RS03970 PF04983 RNA polymerase Rpb1, domain 3 AM348_RS03970 PF05000 RNA polymerase Rpb1, domain 4 AM348_RS03970 PF04998 RNA polymerase Rpb1, domain 5 AM348_RS03970 PF04997 RNA polymerase Rpb1, domain 1 AM348_RS03970 PF00623 RNA polymerase Rpb1, domain 2 AM348_RS03975 PF10385 RNA polymerase beta subunit external 1 domain AM348_RS03975 PF04565 RNA polymerase Rpb2, domain 3 AM348_RS03975 PF00562 RNA polymerase Rpb2, domain 6 AM348_RS03975 PF04560 RNA polymerase Rpb2, domain 7 AM348_RS03975 PF04561 RNA polymerase Rpb2, domain 2 AM348_RS03975 PF04563 RNA polymerase beta subunit AM348_RS03980 PF16320 Ribosomal protein L7/L12 dimerisation domain AM348_RS03980 PF00542 Ribosomal protein L7/L12 C-terminal domain AM348_RS03985 PF00466 Ribosomal protein L10 AM348_RS03995 PF00687 Ribosomal protein L1p/L10e family AM348_RS04000 PF03946 Ribosomal protein L11, N-terminal domain AM348_RS04000 PF00298 Ribosomal protein L11, RNA binding domain AM348_RS04005 PF00467 KOW motif AM348_RS04005 PF02357 Transcription termination factor nusG AM348_RS04010 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM348_RS04015 PF03143 Elongation factor Tu C-terminal domain AM348_RS04015 PF00009 Elongation factor Tu GTP binding domain AM348_RS04015 PF03144 Elongation factor Tu domain 2 AM348_RS04040 PF00485 Phosphoribulokinase / Uridine kinase family AM348_RS04045 PF08279 HTH domain AM348_RS04045 PF02237 Biotin protein ligase C terminal domain AM348_RS04045 PF03099 Biotin/lipoate A/B protein ligase family AM348_RS04050 PF01565 FAD binding domain AM348_RS04050 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM348_RS04080 PF01177 Asp/Glu/Hydantoin racemase AM348_RS04085 PF07715 TonB-dependent Receptor Plug Domain AM348_RS04085 PF00593 TonB dependent receptor AM348_RS04090 PF05958 tRNA (Uracil-5-)-methyltransferase AM348_RS04095 PF07226 Protein of unknown function (DUF1422) AM348_RS04100 PF00440 Bacterial regulatory proteins, tetR family AM348_RS04105 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS04105 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM348_RS04110 PF03466 LysR substrate binding domain AM348_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS04120 PF00206 Lyase AM348_RS04120 PF14698 Argininosuccinate lyase C-terminal AM348_RS04125 PF00696 Amino acid kinase family AM348_RS04130 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM348_RS04130 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM348_RS04135 PF07687 Peptidase dimerisation domain AM348_RS04135 PF01546 Peptidase family M20/M25/M40 AM348_RS04140 PF00311 Phosphoenolpyruvate carboxylase AM348_RS04145 PF00884 Sulfatase AM348_RS04150 PF12833 Helix-turn-helix domain AM348_RS04155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS04160 PF04055 Radical SAM superfamily AM348_RS04165 PF02901 Pyruvate formate lyase-like AM348_RS04165 PF01228 Glycine radical AM348_RS04170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS04180 PF00391 PEP-utilising enzyme, mobile domain AM348_RS04180 PF02896 PEP-utilising enzyme, TIM barrel domain AM348_RS04180 PF00381 PTS HPr component phosphorylation site AM348_RS04180 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS04180 PF05524 PEP-utilising enzyme, N-terminal AM348_RS04185 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM348_RS04190 PF00465 Iron-containing alcohol dehydrogenase AM348_RS04195 PF00141 Peroxidase AM348_RS04200 PF02219 Methylenetetrahydrofolate reductase AM348_RS04210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS04210 PF03466 LysR substrate binding domain AM348_RS04220 PF02872 5'-nucleotidase, C-terminal domain AM348_RS04220 PF00149 Calcineurin-like phosphoesterase AM348_RS04230 PF00696 Amino acid kinase family AM348_RS04230 PF00742 Homoserine dehydrogenase AM348_RS04230 PF03447 Homoserine dehydrogenase, NAD binding domain AM348_RS04235 PF01053 Cys/Met metabolism PLP-dependent enzyme AM348_RS04240 PF01340 Met Apo-repressor, MetJ AM348_RS04250 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM348_RS04260 PF01197 Ribosomal protein L31 AM348_RS04265 PF00271 Helicase conserved C-terminal domain AM348_RS04265 PF17764 3′ DNA-binding domain (3′BD) AM348_RS04265 PF18074 Primosomal protein N C-terminal domain AM348_RS04265 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM348_RS04265 PF00270 DEAD/DEAH box helicase AM348_RS04270 PF00356 Bacterial regulatory proteins, lacI family AM348_RS04280 PF05036 Sporulation related domain AM348_RS04285 PF00227 Proteasome subunit AM348_RS04290 PF00004 ATPase family associated with various cellular activities (AAA) AM348_RS04290 PF07724 AAA domain (Cdc48 subfamily) AM348_RS04290 PF10431 C-terminal, D2-small domain, of ClpB protein AM348_RS04295 PF01040 UbiA prenyltransferase family AM348_RS04300 PF03737 Aldolase/RraA AM348_RS04305 PF06005 Cell division protein ZapB AM348_RS04310 PF00230 Major intrinsic protein AM348_RS04315 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS04315 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS04320 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM348_RS04325 PF00970 Oxidoreductase FAD-binding domain AM348_RS04325 PF00175 Oxidoreductase NAD-binding domain AM348_RS04330 PF05656 Protein of unknown function (DUF805) AM348_RS04335 PF07305 Protein of unknown function (DUF1454) AM348_RS04340 PF00121 Triosephosphate isomerase AM348_RS04345 PF00939 Sodium:sulfate symporter transmembrane region AM348_RS04355 PF02611 CDP-diacylglycerol pyrophosphatase AM348_RS04365 PF00365 Phosphofructokinase AM348_RS04370 PF01545 Cation efflux family AM348_RS04370 PF16916 Dimerisation domain of Zinc Transporter AM348_RS04375 PF07813 LTXXQ motif family protein AM348_RS04380 PF00072 Response regulator receiver domain AM348_RS04380 PF00486 Transcriptional regulatory protein, C terminal AM348_RS04385 PF16527 Two-component sensor protein CpxA, periplasmic domain AM348_RS04385 PF00672 HAMP domain AM348_RS04385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS04385 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS04390 PF07690 Major Facilitator Superfamily AM348_RS04395 PF01261 Xylose isomerase-like TIM barrel AM348_RS04400 PF07702 UTRA domain AM348_RS04400 PF00392 Bacterial regulatory proteins, gntR family AM348_RS04405 PF03473 MOSC domain AM348_RS04405 PF03475 3-alpha domain AM348_RS04410 PF00701 Dihydrodipicolinate synthetase family AM348_RS04415 PF03812 2-keto-3-deoxygluconate permease AM348_RS04420 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM348_RS04420 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM348_RS04425 PF06379 L-rhamnose-proton symport protein (RhaT) AM348_RS04430 PF12833 Helix-turn-helix domain AM348_RS04430 PF02311 AraC-like ligand binding domain AM348_RS04435 PF02311 AraC-like ligand binding domain AM348_RS04435 PF12833 Helix-turn-helix domain AM348_RS04440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS04440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS04445 PF06134 L-rhamnose isomerase (RhaA) AM348_RS04450 PF00596 Class II Aldolase and Adducin N-terminal domain AM348_RS04455 PF00465 Iron-containing alcohol dehydrogenase AM348_RS04460 PF05336 L-rhamnose mutarotase AM348_RS04470 PF03591 AzlC protein AM348_RS04495 PF02634 FdhD/NarQ family AM348_RS04505 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS04505 PF00384 Molybdopterin oxidoreductase AM348_RS04505 PF01568 Molydopterin dinucleotide binding domain AM348_RS04510 PF00384 Molybdopterin oxidoreductase AM348_RS04510 PF01568 Molydopterin dinucleotide binding domain AM348_RS04510 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS04515 PF09163 Formate dehydrogenase N, transmembrane AM348_RS04515 PF13247 4Fe-4S dicluster domain AM348_RS04520 PF01292 Prokaryotic cytochrome b561 AM348_RS04525 PF04216 Protein involved in formate dehydrogenase formation AM348_RS04535 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AM348_RS04540 PF07859 alpha/beta hydrolase fold AM348_RS04545 PF09907 HigB_toxin, RelE-like toxic component of a toxin-antitoxin system AM348_RS04550 PF01381 Helix-turn-helix AM348_RS04555 PF09500 Putative thioesterase (yiiD_Cterm) AM348_RS04555 PF00583 Acetyltransferase (GNAT) family AM348_RS04560 PF02580 D-Tyr-tRNA(Tyr) deacylase AM348_RS04565 PF03631 Virulence factor BrkB AM348_RS04570 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS04580 PF00083 Sugar (and other) transporter AM348_RS04580 PF07690 Major Facilitator Superfamily AM348_RS04585 PF07690 Major Facilitator Superfamily AM348_RS04590 PF00107 Zinc-binding dehydrogenase AM348_RS04590 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS04595 PF01791 DeoC/LacD family aldolase AM348_RS04600 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM348_RS04600 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM348_RS04605 PF00294 pfkB family carbohydrate kinase AM348_RS04610 PF00455 DeoR C terminal sensor domain AM348_RS04610 PF08220 DeoR-like helix-turn-helix domain AM348_RS04615 PF00679 Elongation factor G C-terminus AM348_RS04615 PF03144 Elongation factor Tu domain 2 AM348_RS04615 PF00009 Elongation factor Tu GTP binding domain AM348_RS04625 PF03951 Glutamine synthetase, beta-Grasp domain AM348_RS04625 PF00120 Glutamine synthetase, catalytic domain AM348_RS04630 PF00989 PAS fold AM348_RS04630 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS04630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS04635 PF02954 Bacterial regulatory protein, Fis family AM348_RS04635 PF00158 Sigma-54 interaction domain AM348_RS04635 PF00072 Response regulator receiver domain AM348_RS04645 PF06969 HemN C-terminal domain AM348_RS04645 PF04055 Radical SAM superfamily AM348_RS04650 PF04220 Der GTPase activator (YihI) AM348_RS04655 PF01926 50S ribosome-binding GTPase AM348_RS04660 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM348_RS04660 PF01612 3'-5' exonuclease AM348_RS04660 PF01367 5'-3' exonuclease, C-terminal SAM fold AM348_RS04660 PF00476 DNA polymerase family A AM348_RS04665 PF01553 Acyltransferase AM348_RS04670 PF01323 DSBA-like thioredoxin domain AM348_RS04675 PF01636 Phosphotransferase enzyme family AM348_RS04680 PF06288 Protein of unknown function (DUF1040) AM348_RS04685 PF12804 MobA-like NTP transferase domain AM348_RS04690 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM348_RS04725 PF12724 Flavodoxin domain AM348_RS04730 PF02386 Cation transport protein AM348_RS04735 PF09186 Domain of unknown function (DUF1949) AM348_RS04735 PF01205 Uncharacterized protein family UPF0029 AM348_RS04740 PF00557 Metallopeptidase family M24 AM348_RS04745 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS04745 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM348_RS04745 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM348_RS04750 PF00108 Thiolase, N-terminal domain AM348_RS04750 PF02803 Thiolase, C-terminal domain AM348_RS04755 PF00356 Bacterial regulatory proteins, lacI family AM348_RS04760 PF00480 ROK family AM348_RS04765 PF00175 Oxidoreductase NAD-binding domain AM348_RS04765 PF00970 Oxidoreductase FAD-binding domain AM348_RS04770 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM348_RS04775 PF02357 Transcription termination factor nusG AM348_RS04780 PF01026 TatD related DNase AM348_RS04785 PF00902 Sec-independent protein translocase protein (TatC) AM348_RS04795 PF02416 mttA/Hcf106 family AM348_RS04800 PF03109 ABC1 family AM348_RS04805 PF02036 SCP-2 sterol transfer family AM348_RS04810 PF01209 ubiE/COQ5 methyltransferase family AM348_RS04815 PF02646 RmuC family AM348_RS04820 PF01048 Phosphorylase superfamily AM348_RS04825 PF01738 Dienelactone hydrolase family AM348_RS04830 PF08267 Cobalamin-independent synthase, N-terminal domain AM348_RS04830 PF01717 Cobalamin-independent synthase, Catalytic domain AM348_RS04835 PF03466 LysR substrate binding domain AM348_RS04835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS04840 PF00892 EamA-like transporter family AM348_RS04850 PF12146 Serine aminopeptidase, S33 AM348_RS04855 PF01810 LysE type translocator AM348_RS04860 PF04754 Putative transposase, YhgA-like AM348_RS04865 PF01810 LysE type translocator AM348_RS04870 PF00271 Helicase conserved C-terminal domain AM348_RS04870 PF00270 DEAD/DEAH box helicase AM348_RS04870 PF09382 RQC domain AM348_RS04870 PF00570 HRDC domain AM348_RS04870 PF16124 RecQ zinc-binding AM348_RS04875 PF02253 Phospholipase A1 AM348_RS04880 PF03061 Thioesterase superfamily AM348_RS04885 PF00892 EamA-like transporter family AM348_RS04890 PF01544 CorA-like Mg2+ transporter protein AM348_RS04895 PF13361 UvrD-like helicase C-terminal domain AM348_RS04895 PF00580 UvrD/REP helicase N-terminal domain AM348_RS04900 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS04905 PF00589 Phage integrase family AM348_RS04905 PF02899 Phage integrase, N-terminal SAM-like domain AM348_RS04910 PF04340 Protein of unknown function, DUF484 AM348_RS04915 PF01678 Diaminopimelate epimerase AM348_RS04920 PF13627 Prokaryotic lipoprotein-attachment site AM348_RS04925 PF01491 Frataxin-like domain AM348_RS04930 PF12633 Adenylate cyclase NT domain AM348_RS04930 PF01295 Adenylate cyclase, class-I AM348_RS04935 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM348_RS04935 PF03900 Porphobilinogen deaminase, C-terminal domain AM348_RS04940 PF02602 Uroporphyrinogen-III synthase HemD AM348_RS04945 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM348_RS04950 PF07219 HemY protein N-terminus AM348_RS04950 PF07719 Tetratricopeptide repeat AM348_RS04975 PF00324 Amino acid permease AM348_RS04980 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM348_RS04985 PF06899 WzyE protein, O-antigen assembly polymerase AM348_RS04990 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM348_RS04995 PF01943 Polysaccharide biosynthesis protein AM348_RS05000 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM348_RS05010 PF00483 Nucleotidyl transferase AM348_RS05015 PF16363 GDP-mannose 4,6 dehydratase AM348_RS05020 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM348_RS05020 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM348_RS05020 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM348_RS05025 PF02350 UDP-N-acetylglucosamine 2-epimerase AM348_RS05030 PF02706 Chain length determinant protein AM348_RS05035 PF00953 Glycosyl transferase family 4 AM348_RS05040 PF07498 Rho termination factor, N-terminal domain AM348_RS05040 PF07497 Rho termination factor, RNA-binding domain AM348_RS05040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM348_RS05050 PF00085 Thioredoxin AM348_RS05055 PF00270 DEAD/DEAH box helicase AM348_RS05055 PF00271 Helicase conserved C-terminal domain AM348_RS05065 PF02541 Ppx/GppA phosphatase family AM348_RS05070 PF13361 UvrD-like helicase C-terminal domain AM348_RS05070 PF00580 UvrD/REP helicase N-terminal domain AM348_RS05080 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM348_RS05080 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM348_RS05085 PF03466 LysR substrate binding domain AM348_RS05085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05090 PF07055 Enoyl reductase FAD binding domain AM348_RS05090 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase AM348_RS05090 PF12241 Trans-2-enoyl-CoA reductase catalytic region AM348_RS05095 PF00585 C-terminal regulatory domain of Threonine dehydratase AM348_RS05095 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS05100 PF00920 Dehydratase family AM348_RS05105 PF01063 Amino-transferase class IV AM348_RS05115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS05115 PF00205 Thiamine pyrophosphate enzyme, central domain AM348_RS05115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS05120 PF08046 IlvGEDA operon leader peptide AM348_RS05125 PF01078 Magnesium chelatase, subunit ChlI AM348_RS05125 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM348_RS05130 PF04219 Protein of unknown function, DUF AM348_RS05135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05135 PF03466 LysR substrate binding domain AM348_RS05170 PF07729 FCD domain AM348_RS05170 PF00392 Bacterial regulatory proteins, gntR family AM348_RS05175 PF07690 Major Facilitator Superfamily AM348_RS05180 PF00356 Bacterial regulatory proteins, lacI family AM348_RS05185 PF00294 pfkB family carbohydrate kinase AM348_RS05190 PF13407 Periplasmic binding protein domain AM348_RS05195 PF02653 Branched-chain amino acid transport system / permease component AM348_RS05200 PF00005 ABC transporter AM348_RS05205 PF05025 RbsD / FucU transport protein family AM348_RS05210 PF02705 K+ potassium transporter AM348_RS05215 PF07728 AAA domain (dynein-related subfamily) AM348_RS05215 PF12592 Protein of unknown function (DUF3763) AM348_RS05215 PF17868 AAA lid domain AM348_RS05220 PF05762 VWA domain containing CoxE-like protein AM348_RS05225 PF03590 Aspartate-ammonia ligase AM348_RS05230 PF01037 Lrp/AsnC ligand binding domain AM348_RS05235 PF00258 Flavodoxin AM348_RS05240 PF13932 GidA associated domain AM348_RS05240 PF01134 Glucose inhibited division protein A AM348_RS05245 PF02527 rRNA small subunit methyltransferase G AM348_RS05250 PF03899 ATP synthase I chain AM348_RS05255 PF00119 ATP synthase A chain AM348_RS05260 PF00137 ATP synthase subunit C AM348_RS05265 PF00430 ATP synthase B/B' CF(0) AM348_RS05270 PF00213 ATP synthase delta (OSCP) subunit AM348_RS05275 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM348_RS05275 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM348_RS05275 PF00306 ATP synthase alpha/beta chain, C terminal domain AM348_RS05280 PF00231 ATP synthase AM348_RS05285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM348_RS05285 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM348_RS05290 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM348_RS05290 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM348_RS05295 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS05295 PF12804 MobA-like NTP transferase domain AM348_RS05295 PF14602 Hexapeptide repeat of succinyl-transferase AM348_RS05300 PF01380 SIS domain AM348_RS05305 PF12849 PBP superfamily domain AM348_RS05310 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS05315 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS05320 PF00005 ABC transporter AM348_RS05325 PF01895 PhoU domain AM348_RS05330 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS05335 PF00860 Permease family AM348_RS05340 PF03358 NADPH-dependent FMN reductase AM348_RS05350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05350 PF03466 LysR substrate binding domain AM348_RS05355 PF07690 Major Facilitator Superfamily AM348_RS05360 PF12631 MnmE helical domain AM348_RS05360 PF10396 GTP-binding protein TrmE N-terminus AM348_RS05360 PF01926 50S ribosome-binding GTPase AM348_RS05365 PF02096 60Kd inner membrane protein AM348_RS05365 PF14849 YidC periplasmic domain AM348_RS05370 PF01809 Putative membrane protein insertion efficiency factor AM348_RS05375 PF00825 Ribonuclease P AM348_RS05380 PF00468 Ribosomal protein L34 AM348_RS05390 PF00308 Bacterial dnaA protein AM348_RS05390 PF11638 DnaA N-terminal domain AM348_RS05390 PF08299 Bacterial dnaA protein helix-turn-helix AM348_RS05395 PF00712 DNA polymerase III beta subunit, N-terminal domain AM348_RS05395 PF02768 DNA polymerase III beta subunit, C-terminal domain AM348_RS05395 PF02767 DNA polymerase III beta subunit, central domain AM348_RS05400 PF02463 RecF/RecN/SMC N terminal domain AM348_RS05405 PF00986 DNA gyrase B subunit, carboxyl terminus AM348_RS05405 PF18053 DNA gyrase B subunit insert domain AM348_RS05405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS05405 PF01751 Toprim domain AM348_RS05405 PF00204 DNA gyrase B AM348_RS05435 PF12566 Protein of unknown function (DUF3748) AM348_RS05435 PF07676 WD40-like Beta Propeller Repeat AM348_RS05440 PF07119 Protein of unknown function (DUF1375) AM348_RS05445 PF00011 Hsp20/alpha crystallin family AM348_RS05450 PF00011 Hsp20/alpha crystallin family AM348_RS05455 PF06826 Predicted Permease Membrane Region AM348_RS05455 PF02080 TrkA-C domain AM348_RS05460 PF02656 Domain of unknown function (DUF202) AM348_RS05465 PF02656 Domain of unknown function (DUF202) AM348_RS05475 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS05480 PF02447 GntP family permease AM348_RS05485 PF03466 LysR substrate binding domain AM348_RS05485 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05495 PF07690 Major Facilitator Superfamily AM348_RS05505 PF13939 Toxin TisB, type I toxin-antitoxin system AM348_RS05510 PF08049 IlvB leader peptide AM348_RS05515 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS05515 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS05515 PF00205 Thiamine pyrophosphate enzyme, central domain AM348_RS05520 PF01842 ACT domain AM348_RS05525 PF00455 DeoR C terminal sensor domain AM348_RS05525 PF08220 DeoR-like helix-turn-helix domain AM348_RS05530 PF00294 pfkB family carbohydrate kinase AM348_RS05535 PF07690 Major Facilitator Superfamily AM348_RS05545 PF00196 Bacterial regulatory proteins, luxR family AM348_RS05545 PF00072 Response regulator receiver domain AM348_RS05550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS05550 PF07730 Histidine kinase AM348_RS05550 PF05231 MASE1 AM348_RS05555 PF07690 Major Facilitator Superfamily AM348_RS05560 PF07690 Major Facilitator Superfamily AM348_RS05565 PF03466 LysR substrate binding domain AM348_RS05565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05570 PF06711 Protein of unknown function (DUF1198) AM348_RS05580 PF07690 Major Facilitator Superfamily AM348_RS05585 PF02264 LamB porin AM348_RS05590 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM348_RS05595 PF00232 Glycosyl hydrolase family 1 AM348_RS05600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS05600 PF02378 Phosphotransferase system, EIIC AM348_RS05605 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS05610 PF00356 Bacterial regulatory proteins, lacI family AM348_RS05625 PF04754 Putative transposase, YhgA-like AM348_RS05630 PF03180 NLPA lipoprotein AM348_RS05635 PF00892 EamA-like transporter family AM348_RS05640 PF03466 LysR substrate binding domain AM348_RS05640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05655 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS05655 PF00107 Zinc-binding dehydrogenase AM348_RS05660 PF03466 LysR substrate binding domain AM348_RS05660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS05665 PF03577 Peptidase family C69 AM348_RS05680 PF00196 Bacterial regulatory proteins, luxR family AM348_RS05685 PF03797 Autotransporter beta-domain AM348_RS05700 PF08845 Toxin SymE, type I toxin-antitoxin system AM348_RS05730 PF13802 Galactose mutarotase-like AM348_RS05730 PF01055 Glycosyl hydrolases family 31 AM348_RS05735 PF05043 Mga helix-turn-helix domain AM348_RS05735 PF00874 PRD domain AM348_RS05735 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS05735 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS05735 PF08279 HTH domain AM348_RS05740 PF02378 Phosphotransferase system, EIIC AM348_RS05740 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS05740 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS05745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS05750 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS05755 PF01116 Fructose-bisphosphate aldolase class-II AM348_RS05760 PF01116 Fructose-bisphosphate aldolase class-II AM348_RS05770 PF05170 AsmA family AM348_RS05775 PF00860 Permease family AM348_RS05780 PF03616 Sodium/glutamate symporter AM348_RS05785 PF00271 Helicase conserved C-terminal domain AM348_RS05785 PF17191 RecG wedge domain AM348_RS05785 PF00270 DEAD/DEAH box helicase AM348_RS05790 PF00588 SpoU rRNA Methylase family AM348_RS05790 PF12105 SpoU, rRNA methylase, C-terminal AM348_RS05795 PF04607 Region found in RelA / SpoT proteins AM348_RS05795 PF13291 ACT domain AM348_RS05795 PF02824 TGS domain AM348_RS05800 PF01192 RNA polymerase Rpb6 AM348_RS05805 PF00625 Guanylate kinase AM348_RS05810 PF01653 NAD-dependent DNA ligase adenylation domain AM348_RS05810 PF03120 NAD-dependent DNA ligase OB-fold domain AM348_RS05815 PF03458 UPF0126 domain AM348_RS05820 PF08340 Domain of unknown function (DUF1732) AM348_RS05820 PF03755 YicC-like family, N-terminal region AM348_RS05830 PF01138 3' exoribonuclease family, domain 1 AM348_RS05830 PF03725 3' exoribonuclease family, domain 2 AM348_RS05835 PF00156 Phosphoribosyl transferase domain AM348_RS05840 PF00440 Bacterial regulatory proteins, tetR family AM348_RS05850 PF00692 dUTPase AM348_RS05855 PF04127 DNA / pantothenate metabolism flavoprotein AM348_RS05855 PF02441 Flavoprotein AM348_RS05860 PF04002 RadC-like JAB domain AM348_RS05865 PF00830 Ribosomal L28 family AM348_RS05870 PF00471 Ribosomal protein L33 AM348_RS05875 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM348_RS05875 PF06827 Zinc finger found in FPG and IleRS AM348_RS05875 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM348_RS05880 PF01467 Cytidylyltransferase-like AM348_RS05885 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM348_RS05890 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM348_RS05895 PF00534 Glycosyl transferases group 1 AM348_RS05895 PF13439 Glycosyltransferase Family 4 AM348_RS05915 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM348_RS05920 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM348_RS05925 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM348_RS05930 PF01370 NAD dependent epimerase/dehydratase family AM348_RS05935 PF00155 Aminotransferase class I and II AM348_RS05940 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS05940 PF00107 Zinc-binding dehydrogenase AM348_RS05950 PF00535 Glycosyl transferase family 2 AM348_RS05955 PF04748 Divergent polysaccharide deacetylase AM348_RS05960 PF01551 Peptidase family M23 AM348_RS05965 PF01676 Metalloenzyme superfamily AM348_RS05965 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM348_RS05970 PF00581 Rhodanese-like domain AM348_RS05975 PF00462 Glutaredoxin AM348_RS05980 PF02556 Preprotein translocase subunit SecB AM348_RS05985 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM348_RS05985 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM348_RS05990 PF06426 Serine acetyltransferase, N-terminal AM348_RS05990 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS06000 PF00588 SpoU rRNA Methylase family AM348_RS06005 PF01070 FMN-dependent dehydrogenase AM348_RS06010 PF07729 FCD domain AM348_RS06010 PF00392 Bacterial regulatory proteins, gntR family AM348_RS06015 PF02652 L-lactate permease AM348_RS06020 PF13018 Extended Signal Peptide of Type V secretion system AM348_RS06020 PF05658 Head domain of trimeric autotransporter adhesin AM348_RS06020 PF03895 YadA-like membrane anchor domain AM348_RS06020 PF05662 Coiled stalk of trimeric autotransporter adhesin AM348_RS06025 PF11622 Protein of unknown function (DUF3251) AM348_RS06035 PF10928 Protein of unknown function (DUF2810) AM348_RS06045 PF05068 Mannitol repressor AM348_RS06050 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS06050 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS06055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS06055 PF02378 Phosphotransferase system, EIIC AM348_RS06055 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS06060 PF11742 Protein of unknown function (DUF3302) AM348_RS06065 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS06065 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS06070 PF13417 Glutathione S-transferase, N-terminal domain AM348_RS06070 PF00043 Glutathione S-transferase, C-terminal domain AM348_RS06075 PF12390 Selenocysteine synthase N terminal AM348_RS06075 PF03841 L-seryl-tRNA selenium transferase AM348_RS06080 PF09107 Elongation factor SelB, winged helix AM348_RS06080 PF00009 Elongation factor Tu GTP binding domain AM348_RS06080 PF03144 Elongation factor Tu domain 2 AM348_RS06080 PF09106 Elongation factor SelB, winged helix AM348_RS06085 PF00465 Iron-containing alcohol dehydrogenase AM348_RS06090 PF00171 Aldehyde dehydrogenase family AM348_RS06095 PF11742 Protein of unknown function (DUF3302) AM348_RS06100 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS06100 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS06105 PF03466 LysR substrate binding domain AM348_RS06110 PF06629 MltA-interacting protein MipA AM348_RS06115 PF07944 Beta-L-arabinofuranosidase, GH127 AM348_RS06125 PF12833 Helix-turn-helix domain AM348_RS06125 PF02311 AraC-like ligand binding domain AM348_RS06130 PF13247 4Fe-4S dicluster domain AM348_RS06135 PF00155 Aminotransferase class I and II AM348_RS06140 PF00128 Alpha amylase, catalytic domain AM348_RS06150 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM348_RS06155 PF12833 Helix-turn-helix domain AM348_RS06165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS06165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS06170 PF05360 yiaA/B two helix domain AM348_RS06175 PF01757 Acyltransferase family AM348_RS06180 PF13983 YsaB-like lipoprotein AM348_RS06185 PF02091 Glycyl-tRNA synthetase alpha subunit AM348_RS06190 PF02092 Glycyl-tRNA synthetase beta subunit AM348_RS06190 PF05746 DALR anticodon binding domain AM348_RS06200 PF00313 'Cold-shock' DNA-binding domain AM348_RS06205 PF01381 Helix-turn-helix AM348_RS06210 PF11254 Protein of unknown function (DUF3053) AM348_RS06215 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM348_RS06215 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM348_RS06220 PF07690 Major Facilitator Superfamily AM348_RS06225 PF00294 pfkB family carbohydrate kinase AM348_RS06235 PF00356 Bacterial regulatory proteins, lacI family AM348_RS06240 PF13488 Glycine zipper AM348_RS06240 PF00691 OmpA family AM348_RS06245 PF00384 Molybdopterin oxidoreductase AM348_RS06245 PF18364 Molybdopterin oxidoreductase N-terminal domain AM348_RS06245 PF01568 Molydopterin dinucleotide binding domain AM348_RS06250 PF00583 Acetyltransferase (GNAT) family AM348_RS06255 PF03352 Methyladenine glycosylase AM348_RS06260 PF03797 Autotransporter beta-domain AM348_RS06265 PF07690 Major Facilitator Superfamily AM348_RS06270 PF00884 Sulfatase AM348_RS06270 PF08019 Phosphoethanolamine transferase EptA/EptB AM348_RS06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS06305 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS06305 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS06310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS06310 PF00005 ABC transporter AM348_RS06315 PF00005 ABC transporter AM348_RS06315 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS06320 PF02954 Bacterial regulatory protein, Fis family AM348_RS06320 PF00072 Response regulator receiver domain AM348_RS06320 PF00158 Sigma-54 interaction domain AM348_RS06325 PF03222 Tryptophan/tyrosine permease family AM348_RS06330 PF01053 Cys/Met metabolism PLP-dependent enzyme AM348_RS06335 PF13940 Toxin Ldr, type I toxin-antitoxin system AM348_RS06340 PF00672 HAMP domain AM348_RS06340 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS06340 PF17154 Gammaproteobacterial periplasmic sensor domain AM348_RS06340 PF00563 EAL domain AM348_RS06350 PF00375 Sodium:dicarboxylate symporter family AM348_RS06360 PF00675 Insulinase (Peptidase family M16) AM348_RS06360 PF05193 Peptidase M16 inactive domain AM348_RS06365 PF00294 pfkB family carbohydrate kinase AM348_RS06370 PF00563 EAL domain AM348_RS06375 PF05170 AsmA family AM348_RS06380 PF00083 Sugar (and other) transporter AM348_RS06380 PF07690 Major Facilitator Superfamily AM348_RS06385 PF03631 Virulence factor BrkB AM348_RS06390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS06390 PF03466 LysR substrate binding domain AM348_RS06400 PF00196 Bacterial regulatory proteins, luxR family AM348_RS06410 PF13302 Acetyltransferase (GNAT) domain AM348_RS06420 PF01204 Trehalase AM348_RS06425 PF03150 Di-haem cytochrome c peroxidase AM348_RS06425 PF00034 Cytochrome c AM348_RS06425 PF14376 Haem-binding domain AM348_RS06430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS06430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM348_RS06435 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM348_RS06440 PF01432 Peptidase family M3 AM348_RS06445 PF04445 Putative SAM-dependent methyltransferase AM348_RS06450 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS06455 PF02082 Transcriptional regulator AM348_RS06460 PF00854 POT family AM348_RS06465 PF00582 Universal stress protein family AM348_RS06470 PF10625 Universal stress protein B (UspB) AM348_RS06475 PF01384 Phosphate transporter family AM348_RS06485 PF07729 FCD domain AM348_RS06485 PF00392 Bacterial regulatory proteins, gntR family AM348_RS06490 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS06490 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS06495 PF03786 D-mannonate dehydratase (UxuA) AM348_RS06500 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS06500 PF00107 Zinc-binding dehydrogenase AM348_RS06505 PF07690 Major Facilitator Superfamily AM348_RS06515 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS06515 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS06520 PF01266 FAD dependent oxidoreductase AM348_RS06520 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM348_RS06525 PF01565 FAD binding domain AM348_RS06525 PF02913 FAD linked oxidases, C-terminal domain AM348_RS06540 PF00465 Iron-containing alcohol dehydrogenase AM348_RS06545 PF13533 Biotin-lipoyl like AM348_RS06550 PF00005 ABC transporter AM348_RS06560 PF01402 Ribbon-helix-helix protein, copG family AM348_RS06560 PF08753 NikR C terminal nickel binding domain AM348_RS06570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS06570 PF03466 LysR substrate binding domain AM348_RS06575 PF05870 Phenolic acid decarboxylase (PAD) AM348_RS06580 PF01648 4'-phosphopantetheinyl transferase superfamily AM348_RS06585 PF02801 Beta-ketoacyl synthase, C-terminal domain AM348_RS06585 PF00109 Beta-ketoacyl synthase, N-terminal domain AM348_RS06600 PF00109 Beta-ketoacyl synthase, N-terminal domain AM348_RS06600 PF02801 Beta-ketoacyl synthase, C-terminal domain AM348_RS06625 PF00535 Glycosyl transferase family 2 AM348_RS06645 PF00550 Phosphopantetheine attachment site AM348_RS06650 PF00550 Phosphopantetheine attachment site AM348_RS06675 PF01594 AI-2E family transporter AM348_RS06680 PF07690 Major Facilitator Superfamily AM348_RS06685 PF08786 DcrB AM348_RS06690 PF02592 Putative vitamin uptake transporter AM348_RS06695 PF01206 Sulfurtransferase TusA AM348_RS06700 PF00403 Heavy-metal-associated domain AM348_RS06705 PF07947 YhhN family AM348_RS06710 PF10694 Protein of unknown function (DUF2500) AM348_RS06715 PF06611 Protein of unknown function (DUF1145) AM348_RS06725 PF02881 SRP54-type protein, helical bundle domain AM348_RS06725 PF00448 SRP54-type protein, GTPase domain AM348_RS06730 PF00005 ABC transporter AM348_RS06735 PF02687 FtsX-like permease family AM348_RS06735 PF18075 FtsX extracellular domain AM348_RS06740 PF04545 Sigma-70, region 4 AM348_RS06740 PF04542 Sigma-70 region 2 AM348_RS06745 PF13458 Periplasmic binding protein AM348_RS06750 PF12568 Acetyltransferase (GNAT) domain, PanZ AM348_RS06760 PF13458 Periplasmic binding protein AM348_RS06765 PF02653 Branched-chain amino acid transport system / permease component AM348_RS06770 PF11862 Domain of unknown function (DUF3382) AM348_RS06770 PF02653 Branched-chain amino acid transport system / permease component AM348_RS06775 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM348_RS06775 PF00005 ABC transporter AM348_RS06780 PF00005 ABC transporter AM348_RS06790 PF13416 Bacterial extracellular solute-binding protein AM348_RS06795 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS06800 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS06805 PF00005 ABC transporter AM348_RS06805 PF17912 MalK OB fold domain AM348_RS06810 PF03009 Glycerophosphoryl diester phosphodiesterase family AM348_RS06815 PF10956 Protein of unknown function (DUF2756) AM348_RS06830 PF05638 Type VI secretion system effector, Hcp AM348_RS06840 PF00583 Acetyltransferase (GNAT) family AM348_RS06845 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM348_RS06845 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS06850 PF17954 Quercetinase C-terminal cupin domain AM348_RS06850 PF02678 Pirin AM348_RS06855 PF00356 Bacterial regulatory proteins, lacI family AM348_RS06855 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM348_RS06860 PF01202 Shikimate kinase AM348_RS06865 PF02447 GntP family permease AM348_RS06885 PF01914 MarC family integral membrane protein AM348_RS06890 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM348_RS06890 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM348_RS06895 PF00128 Alpha amylase, catalytic domain AM348_RS06895 PF02806 Alpha amylase, C-terminal all-beta domain AM348_RS06895 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM348_RS06900 PF00128 Alpha amylase, catalytic domain AM348_RS06900 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM348_RS06900 PF18390 Glycogen debranching enzyme C-terminal domain AM348_RS06905 PF00483 Nucleotidyl transferase AM348_RS06910 PF00534 Glycosyl transferases group 1 AM348_RS06910 PF08323 Starch synthase catalytic domain AM348_RS06915 PF00343 Carbohydrate phosphorylase AM348_RS06920 PF01266 FAD dependent oxidoreductase AM348_RS06920 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM348_RS06925 PF00581 Rhodanese-like domain AM348_RS06930 PF01694 Rhomboid family AM348_RS06930 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM348_RS06935 PF08220 DeoR-like helix-turn-helix domain AM348_RS06935 PF00455 DeoR C terminal sensor domain AM348_RS06940 PF17874 MalT-like TPR region AM348_RS06940 PF00196 Bacterial regulatory proteins, luxR family AM348_RS06945 PF00343 Carbohydrate phosphorylase AM348_RS06950 PF02446 4-alpha-glucanotransferase AM348_RS06955 PF02447 GntP family permease AM348_RS06960 PF01521 Iron-sulphur cluster biosynthesis AM348_RS06960 PF01106 NifU-like domain AM348_RS06965 PF00156 Phosphoribosyl transferase domain AM348_RS06970 PF00561 alpha/beta hydrolase fold AM348_RS06980 PF09012 FeoC like transcriptional regulator AM348_RS06985 PF02421 Ferrous iron transport protein B AM348_RS06985 PF07670 Nucleoside recognition AM348_RS06985 PF07664 Ferrous iron transport protein B C terminus AM348_RS06985 PF17910 FeoB cytosolic helical domain AM348_RS06990 PF04023 FeoA domain AM348_RS06995 PF00575 S1 RNA binding domain AM348_RS06995 PF17674 HHH domain AM348_RS06995 PF09371 Tex-like protein N-terminal domain AM348_RS06995 PF16921 Tex protein YqgF-like domain AM348_RS07000 PF03449 Transcription elongation factor, N-terminal AM348_RS07000 PF01272 Transcription elongation factor, GreA/GreB, C-term AM348_RS07005 PF00486 Transcriptional regulatory protein, C terminal AM348_RS07005 PF00072 Response regulator receiver domain AM348_RS07010 PF00672 HAMP domain AM348_RS07010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS07010 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS07015 PF01293 Phosphoenolpyruvate carboxykinase AM348_RS07020 PF13687 Domain of unknown function (DUF4153) AM348_RS07025 PF01430 Hsp33 protein AM348_RS07030 PF01479 S4 domain AM348_RS07035 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS07040 PF07095 Intracellular growth attenuator protein IgaA AM348_RS07045 PF00293 NUDIX domain AM348_RS07050 PF17092 Penicillin-binding protein OB-like domain AM348_RS07050 PF00905 Penicillin binding protein transpeptidase domain AM348_RS07050 PF00912 Transglycosylase AM348_RS07070 PF10748 DNA utilization proteins HofP AM348_RS07075 PF03958 Bacterial type II/III secretion system short domain AM348_RS07075 PF00263 Bacterial type II and III secretion system protein AM348_RS07080 PF01202 Shikimate kinase AM348_RS07085 PF01761 3-dehydroquinate synthase AM348_RS07090 PF05036 Sporulation related domain AM348_RS07095 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM348_RS07100 PF00834 Ribulose-phosphate 3 epimerase family AM348_RS07105 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS07110 PF00579 tRNA synthetases class I (W and Y) AM348_RS07115 PF13978 Protein of unknown function (DUF4223) AM348_RS07125 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS07125 PF14824 Sirohaem biosynthesis protein central AM348_RS07125 PF10414 Sirohaem synthase dimerisation region AM348_RS07135 PF01226 Formate/nitrite transporter AM348_RS07140 PF13806 Rieske-like [2Fe-2S] domain AM348_RS07145 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM348_RS07145 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS07145 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM348_RS07145 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM348_RS07145 PF04324 BFD-like [2Fe-2S] binding domain AM348_RS07150 PF07690 Major Facilitator Superfamily AM348_RS07155 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM348_RS07160 PF10832 Protein of unknown function (DUF2559) AM348_RS07165 PF02661 Fic/DOC family AM348_RS07170 PF00117 Glutamine amidotransferase class-I AM348_RS07175 PF00202 Aminotransferase class-III AM348_RS07180 PF12805 FUSC-like inner membrane protein yccS AM348_RS07185 PF00027 Cyclic nucleotide-binding domain AM348_RS07185 PF13545 Crp-like helix-turn-helix domain AM348_RS07200 PF02566 OsmC-like protein AM348_RS07205 PF00485 Phosphoribulokinase / Uridine kinase family AM348_RS07210 PF06794 Uncharacterised protein family (UPF0270) AM348_RS07215 PF00561 alpha/beta hydrolase fold AM348_RS07225 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM348_RS07225 PF14572 Phosphoribosyl synthetase-associated domain AM348_RS07230 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM348_RS07235 PF00005 ABC transporter AM348_RS07235 PF12848 ABC transporter AM348_RS07245 PF02525 Flavodoxin-like fold AM348_RS07250 PF00999 Sodium/hydrogen exchanger family AM348_RS07250 PF02254 TrkA-N domain AM348_RS07255 PF09526 Probable metal-binding protein (DUF2387) AM348_RS07260 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM348_RS07265 PF04102 SlyX AM348_RS07270 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM348_RS07270 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM348_RS07275 PF13309 HTH domain AM348_RS07275 PF08348 YheO-like PAS domain AM348_RS07280 PF02635 DsrE/DsrF-like family AM348_RS07285 PF02635 DsrE/DsrF-like family AM348_RS07290 PF04077 DsrH like protein AM348_RS07295 PF00164 Ribosomal protein S12/S23 AM348_RS07300 PF00177 Ribosomal protein S7p/S5e AM348_RS07305 PF00679 Elongation factor G C-terminus AM348_RS07305 PF14492 Elongation Factor G, domain II AM348_RS07305 PF03144 Elongation factor Tu domain 2 AM348_RS07305 PF03764 Elongation factor G, domain IV AM348_RS07305 PF00009 Elongation factor Tu GTP binding domain AM348_RS07310 PF03144 Elongation factor Tu domain 2 AM348_RS07310 PF00009 Elongation factor Tu GTP binding domain AM348_RS07310 PF03143 Elongation factor Tu C-terminal domain AM348_RS07320 PF04324 BFD-like [2Fe-2S] binding domain AM348_RS07325 PF00210 Ferritin-like domain AM348_RS07330 PF01478 Type IV leader peptidase family AM348_RS07335 PF00338 Ribosomal protein S10p/S20e AM348_RS07340 PF00297 Ribosomal protein L3 AM348_RS07345 PF00573 Ribosomal protein L4/L1 family AM348_RS07350 PF00276 Ribosomal protein L23 AM348_RS07355 PF00181 Ribosomal Proteins L2, RNA binding domain AM348_RS07355 PF03947 Ribosomal Proteins L2, C-terminal domain AM348_RS07360 PF00203 Ribosomal protein S19 AM348_RS07365 PF00237 Ribosomal protein L22p/L17e AM348_RS07370 PF07650 KH domain AM348_RS07370 PF00189 Ribosomal protein S3, C-terminal domain AM348_RS07375 PF00252 Ribosomal protein L16p/L10e AM348_RS07380 PF00831 Ribosomal L29 protein AM348_RS07385 PF00366 Ribosomal protein S17 AM348_RS07390 PF00238 Ribosomal protein L14p/L23e AM348_RS07395 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM348_RS07395 PF00467 KOW motif AM348_RS07400 PF00281 Ribosomal protein L5 AM348_RS07400 PF00673 ribosomal L5P family C-terminus AM348_RS07405 PF00253 Ribosomal protein S14p/S29e AM348_RS07410 PF00410 Ribosomal protein S8 AM348_RS07415 PF00347 Ribosomal protein L6 AM348_RS07420 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM348_RS07425 PF03719 Ribosomal protein S5, C-terminal domain AM348_RS07425 PF00333 Ribosomal protein S5, N-terminal domain AM348_RS07430 PF00327 Ribosomal protein L30p/L7e AM348_RS07435 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM348_RS07440 PF00344 SecY translocase AM348_RS07445 PF00444 Ribosomal protein L36 AM348_RS07450 PF00416 Ribosomal protein S13/S18 AM348_RS07455 PF00411 Ribosomal protein S11 AM348_RS07460 PF00163 Ribosomal protein S4/S9 N-terminal domain AM348_RS07460 PF01479 S4 domain AM348_RS07465 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM348_RS07465 PF01000 RNA polymerase Rpb3/RpoA insert domain AM348_RS07465 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM348_RS07470 PF01196 Ribosomal protein L17 AM348_RS07475 PF09350 Domain of unknown function (DUF1992) AM348_RS07480 PF13411 MerR HTH family regulatory protein AM348_RS07485 PF03889 Alternative ribosome-rescue factor A AM348_RS07490 PF01741 Large-conductance mechanosensitive channel, MscL AM348_RS07495 PF02080 TrkA-C domain AM348_RS07495 PF02254 TrkA-N domain AM348_RS07500 PF01189 16S rRNA methyltransferase RsmB/F AM348_RS07500 PF01029 NusB family AM348_RS07505 PF02911 Formyl transferase, C-terminal domain AM348_RS07505 PF00551 Formyl transferase AM348_RS07510 PF01327 Polypeptide deformylase AM348_RS07515 PF17782 DprA winged helix domain AM348_RS07515 PF02481 DNA recombination-mediator protein A AM348_RS07520 PF04361 Protein of unknown function (DUF494) AM348_RS07525 PF01396 Topoisomerase DNA binding C4 zinc finger AM348_RS07530 PF01300 Telomere recombination AM348_RS07535 PF08501 Shikimate dehydrogenase substrate binding domain AM348_RS07535 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM348_RS07535 PF01488 Shikimate / quinate 5-dehydrogenase AM348_RS07540 PF07369 Protein of unknown function (DUF1488) AM348_RS07545 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS07595 PF00005 ABC transporter AM348_RS07600 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS07605 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS07610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS07620 PF00873 AcrB/AcrD/AcrF family AM348_RS07625 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS07625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS07630 PF00440 Bacterial regulatory proteins, tetR family AM348_RS07630 PF08361 MAATS-type transcriptional repressor, C-terminal region AM348_RS07635 PF10831 Protein of unknown function (DUF2556) AM348_RS07640 PF01555 DNA methylase AM348_RS07645 PF02954 Bacterial regulatory protein, Fis family AM348_RS07650 PF01207 Dihydrouridine synthase (Dus) AM348_RS07655 PF00194 Eukaryotic-type carbonic anhydrase AM348_RS07665 PF00474 Sodium:solute symporter family AM348_RS07670 PF06196 Protein of unknown function (DUF997) AM348_RS07675 PF00289 Biotin carboxylase, N-terminal domain AM348_RS07675 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM348_RS07675 PF02785 Biotin carboxylase C-terminal domain AM348_RS07680 PF00364 Biotin-requiring enzyme AM348_RS07690 PF01794 Ferric reductase like transmembrane component AM348_RS07695 PF00174 Oxidoreductase molybdopterin binding domain AM348_RS07700 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS07700 PF00107 Zinc-binding dehydrogenase AM348_RS07705 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS07705 PF00563 EAL domain AM348_RS07705 PF17157 Gammaproteobacterial periplasmic sensor domain AM348_RS07720 PF04085 rod shape-determining protein MreC AM348_RS07725 PF04093 rod shape-determining protein MreD AM348_RS07730 PF02545 Maf-like protein AM348_RS07735 PF00575 S1 RNA binding domain AM348_RS07735 PF10150 Ribonuclease E/G family AM348_RS07740 PF13502 AsmA-like C-terminal region AM348_RS07740 PF13116 Protein of unknown function AM348_RS07745 PF01523 Putative modulator of DNA gyrase AM348_RS07750 PF03466 LysR substrate binding domain AM348_RS07750 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS07755 PF07869 Protein of unknown function (DUF1656) AM348_RS07760 PF13533 Biotin-lipoyl like AM348_RS07765 PF04632 Fusaric acid resistance protein family AM348_RS07770 PF01337 Barstar (barnase inhibitor) AM348_RS07780 PF01316 Arginine repressor, DNA binding domain AM348_RS07780 PF02863 Arginine repressor, C-terminal domain AM348_RS07790 PF00056 lactate/malate dehydrogenase, NAD binding domain AM348_RS07790 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM348_RS07795 PF13180 PDZ domain AM348_RS07800 PF13180 PDZ domain AM348_RS07800 PF00595 PDZ domain AM348_RS07805 PF06295 Protein of unknown function (DUF1043) AM348_RS07810 PF03969 AFG1-like ATPase AM348_RS07815 PF00572 Ribosomal protein L13 AM348_RS07820 PF00380 Ribosomal protein S9/S16 AM348_RS07830 PF00043 Glutathione S-transferase, C-terminal domain AM348_RS07830 PF02798 Glutathione S-transferase, N-terminal domain AM348_RS07835 PF04386 Stringent starvation protein B AM348_RS07840 PF03606 C4-dicarboxylate anaerobic carrier AM348_RS07845 PF07729 FCD domain AM348_RS07845 PF00392 Bacterial regulatory proteins, gntR family AM348_RS07850 PF00701 Dihydrodipicolinate synthetase family AM348_RS07855 PF07690 Major Facilitator Superfamily AM348_RS07860 PF00480 ROK family AM348_RS07865 PF04074 YhcH/YjgK/YiaL AM348_RS07870 PF07969 Amidohydrolase family AM348_RS07875 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin AM348_RS07880 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS07880 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM348_RS07885 PF04898 Glutamate synthase central domain AM348_RS07885 PF01645 Conserved region in glutamate synthase AM348_RS07885 PF01493 GXGXG motif AM348_RS07885 PF00310 Glutamine amidotransferases class-II AM348_RS07895 PF04055 Radical SAM superfamily AM348_RS07895 PF16199 Radical_SAM C-terminal domain AM348_RS07900 PF00072 Response regulator receiver domain AM348_RS07900 PF00989 PAS fold AM348_RS07900 PF01627 Hpt domain AM348_RS07900 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM348_RS07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS07900 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS07910 PF00912 Transglycosylase AM348_RS07915 PF00381 PTS HPr component phosphorylation site AM348_RS07920 PF03668 P-loop ATPase protein family AM348_RS07925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS07930 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM348_RS07935 PF04963 Sigma-54 factor, core binding domain AM348_RS07935 PF04552 Sigma-54, DNA binding domain AM348_RS07935 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM348_RS07940 PF00005 ABC transporter AM348_RS07940 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM348_RS07945 PF03968 OstA-like protein AM348_RS07950 PF06835 Lipopolysaccharide-assembly, LptC-related AM348_RS07960 PF00571 CBS domain AM348_RS07960 PF01380 SIS domain AM348_RS07965 PF01699 Sodium/calcium exchanger protein AM348_RS07970 PF00005 ABC transporter AM348_RS07975 PF02405 Permease MlaE AM348_RS07980 PF02470 MlaD protein AM348_RS07985 PF05494 MlaC protein AM348_RS07990 PF13466 STAS domain AM348_RS07995 PF01722 BolA-like protein AM348_RS08000 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM348_RS08005 PF13693 Winged helix-turn-helix DNA-binding AM348_RS08010 PF00348 Polyprenyl synthetase AM348_RS08015 PF00829 Ribosomal prokaryotic L21 protein AM348_RS08020 PF01016 Ribosomal L27 protein AM348_RS08025 PF00892 EamA-like transporter family AM348_RS08030 PF01926 50S ribosome-binding GTPase AM348_RS08030 PF01018 GTP1/OBG AM348_RS08035 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM348_RS08045 PF01272 Transcription elongation factor, GreA/GreB, C-term AM348_RS08045 PF03449 Transcription elongation factor, N-terminal AM348_RS08055 PF01985 CRS1 / YhbY (CRM) domain AM348_RS08060 PF01728 FtsJ-like methyltransferase AM348_RS08065 PF01434 Peptidase family M41 AM348_RS08065 PF06480 FtsH Extracellular AM348_RS08065 PF17862 AAA+ lid domain AM348_RS08065 PF00004 ATPase family associated with various cellular activities (AAA) AM348_RS08070 PF00809 Pterin binding enzyme AM348_RS08075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM348_RS08075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM348_RS08075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM348_RS08075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM348_RS08080 PF03606 C4-dicarboxylate anaerobic carrier AM348_RS08085 PF01979 Amidohydrolase family AM348_RS08090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS08090 PF03466 LysR substrate binding domain AM348_RS08095 PF03840 Preprotein translocase SecG subunit AM348_RS08105 PF00764 Arginosuccinate synthase AM348_RS08115 PF02576 RimP N-terminal domain AM348_RS08115 PF17384 RimP C-terminal SH3 domain AM348_RS08120 PF13184 NusA-like KH domain AM348_RS08120 PF00575 S1 RNA binding domain AM348_RS08120 PF08529 NusA N-terminal domain AM348_RS08125 PF00009 Elongation factor Tu GTP binding domain AM348_RS08125 PF08364 Bacterial translation initiation factor IF-2 associated region AM348_RS08125 PF11987 Translation-initiation factor 2 AM348_RS08125 PF04760 Translation initiation factor IF-2, N-terminal region AM348_RS08130 PF02033 Ribosome-binding factor A AM348_RS08135 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM348_RS08135 PF09157 Pseudouridine synthase II TruB, C-terminal AM348_RS08135 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM348_RS08140 PF00312 Ribosomal protein S15 AM348_RS08145 PF01138 3' exoribonuclease family, domain 1 AM348_RS08145 PF03725 3' exoribonuclease family, domain 2 AM348_RS08145 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM348_RS08145 PF00013 KH domain AM348_RS08145 PF00575 S1 RNA binding domain AM348_RS08150 PF13181 Tetratricopeptide repeat AM348_RS08150 PF07719 Tetratricopeptide repeat AM348_RS08155 PF03880 DbpA RNA binding domain AM348_RS08155 PF00271 Helicase conserved C-terminal domain AM348_RS08155 PF00270 DEAD/DEAH box helicase AM348_RS08155 PF12343 Cold shock protein DEAD box A AM348_RS08160 PF03222 Tryptophan/tyrosine permease family AM348_RS08165 PF00296 Luciferase-like monooxygenase AM348_RS08170 PF01136 Peptidase family U32 AM348_RS08175 PF01136 Peptidase family U32 AM348_RS08180 PF02036 SCP-2 sterol transfer family AM348_RS08185 PF13508 Acetyltransferase (GNAT) domain AM348_RS08190 PF01541 GIY-YIG catalytic domain AM348_RS08200 PF13460 NAD(P)H-binding AM348_RS08205 PF04972 BON domain AM348_RS08210 PF13580 SIS domain AM348_RS08215 PF02021 Uncharacterised protein family UPF0102 AM348_RS08220 PF04348 LppC putative lipoprotein AM348_RS08225 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS08230 PF02661 Fic/DOC family AM348_RS08230 PF13784 Fic/DOC family N-terminal AM348_RS08235 PF08220 DeoR-like helix-turn-helix domain AM348_RS08240 PF00107 Zinc-binding dehydrogenase AM348_RS08240 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS08245 PF03611 PTS system sugar-specific permease component AM348_RS08250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS08255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS08260 PF08013 Tagatose 6 phosphate kinase AM348_RS08265 PF01116 Fructose-bisphosphate aldolase class-II AM348_RS08270 PF08666 SAF domain AM348_RS08270 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM348_RS08280 PF07690 Major Facilitator Superfamily AM348_RS08285 PF03328 HpcH/HpaI aldolase/citrate lyase family AM348_RS08290 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM348_RS08290 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM348_RS08295 PF02595 Glycerate kinase family AM348_RS08305 PF03466 LysR substrate binding domain AM348_RS08305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS08310 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS08315 PF03222 Tryptophan/tyrosine permease family AM348_RS08320 PF00871 Acetokinase family AM348_RS08325 PF01228 Glycine radical AM348_RS08325 PF02901 Pyruvate formate lyase-like AM348_RS08330 PF01042 Endoribonuclease L-PSP AM348_RS08335 PF03313 Serine dehydratase alpha chain AM348_RS08335 PF03315 Serine dehydratase beta chain AM348_RS08350 PF03313 Serine dehydratase alpha chain AM348_RS08360 PF02678 Pirin AM348_RS08360 PF17954 Quercetinase C-terminal cupin domain AM348_RS08365 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS08365 PF03466 LysR substrate binding domain AM348_RS08370 PF05656 Protein of unknown function (DUF805) AM348_RS08375 PF13409 Glutathione S-transferase, N-terminal domain AM348_RS08380 PF07681 DoxX AM348_RS08385 PF13997 YqjK-like protein AM348_RS08390 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM348_RS08395 PF05957 Bacterial protein of unknown function (DUF883) AM348_RS08400 PF06476 Protein of unknown function (DUF1090) AM348_RS08405 PF13721 SecD export protein N-terminal TM region AM348_RS08410 PF09335 SNARE associated Golgi protein AM348_RS08415 PF00392 Bacterial regulatory proteins, gntR family AM348_RS08415 PF07729 FCD domain AM348_RS08420 PF07690 Major Facilitator Superfamily AM348_RS08425 PF02614 Glucuronate isomerase AM348_RS08430 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM348_RS08430 PF08666 SAF domain AM348_RS08435 PF10688 Bacterial inner membrane protein AM348_RS08440 PF00375 Sodium:dicarboxylate symporter family AM348_RS08445 PF03741 Integral membrane protein TerC family AM348_RS08450 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS08455 PF01863 Protein of unknown function DUF45 AM348_RS08460 PF05175 Methyltransferase small domain AM348_RS08465 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM348_RS08465 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS08470 PF01204 Trehalase AM348_RS08480 PF13520 Amino acid permease AM348_RS08485 PF04074 YhcH/YjgK/YiaL AM348_RS08490 PF16353 Domain of unknown function(DUF4981) AM348_RS08490 PF02929 Beta galactosidase small chain AM348_RS08490 PF00703 Glycosyl hydrolases family 2 AM348_RS08490 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM348_RS08490 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM348_RS08495 PF00356 Bacterial regulatory proteins, lacI family AM348_RS08500 PF01588 Putative tRNA binding domain AM348_RS08505 PF00202 Aminotransferase class-III AM348_RS08510 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS08510 PF08447 PAS fold AM348_RS08515 PF03551 Transcriptional regulator PadR-like family AM348_RS08520 PF08021 Siderophore-interacting FAD-binding domain AM348_RS08520 PF04954 Siderophore-interacting protein AM348_RS08535 PF02733 Dak1 domain AM348_RS08535 PF02734 DAK2 domain AM348_RS08545 PF00465 Iron-containing alcohol dehydrogenase AM348_RS08550 PF00158 Sigma-54 interaction domain AM348_RS08550 PF02954 Bacterial regulatory protein, Fis family AM348_RS08550 PF00989 PAS fold AM348_RS08555 PF01923 Cobalamin adenosyltransferase AM348_RS08560 PF02288 Dehydratase medium subunit AM348_RS08565 PF00465 Iron-containing alcohol dehydrogenase AM348_RS08570 PF03928 Haem-degrading AM348_RS08575 PF02286 Dehydratase large subunit AM348_RS08580 PF02288 Dehydratase medium subunit AM348_RS08585 PF02287 Dehydratase small subunit AM348_RS08590 PF18427 DD-reactivating factor swiveling domain AM348_RS08590 PF08841 Diol dehydratase reactivase ATPase-like domain AM348_RS08595 PF08986 Domain of unknown function (DUF1889) AM348_RS08605 PF03167 Uracil DNA glycosylase superfamily AM348_RS08610 PF03979 Sigma-70 factor, region 1.1 AM348_RS08610 PF00140 Sigma-70 factor, region 1.2 AM348_RS08610 PF04542 Sigma-70 region 2 AM348_RS08610 PF04539 Sigma-70 region 3 AM348_RS08610 PF04546 Sigma-70, non-essential region AM348_RS08610 PF04545 Sigma-70, region 4 AM348_RS08615 PF08275 DNA primase catalytic core, N-terminal domain AM348_RS08615 PF10410 DnaB-helicase binding domain of primase AM348_RS08615 PF08278 DNA primase DnaG DnaB-binding AM348_RS08615 PF01807 CHC2 zinc finger AM348_RS08620 PF01165 Ribosomal protein S21 AM348_RS08630 PF00814 Glycoprotease family AM348_RS08635 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM348_RS08640 PF01730 UreF AM348_RS08645 PF05194 UreE urease accessory protein, C-terminal domain AM348_RS08645 PF02814 UreE urease accessory protein, N-terminal domain AM348_RS08650 PF00449 Urease alpha-subunit, N-terminal domain AM348_RS08650 PF01979 Amidohydrolase family AM348_RS08655 PF00699 Urease beta subunit AM348_RS08660 PF00547 Urease, gamma subunit AM348_RS08665 PF01774 UreD urease accessory protein AM348_RS08670 PF00939 Sodium:sulfate symporter transmembrane region AM348_RS08675 PF05683 Fumarase C-terminus AM348_RS08680 PF05681 Fumarate hydratase (Fumerase) AM348_RS08685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS08685 PF03466 LysR substrate binding domain AM348_RS08690 PF02660 Glycerol-3-phosphate acyltransferase AM348_RS08695 PF02152 Dihydroneopterin aldolase AM348_RS08700 PF02673 Bacitracin resistance protein BacA AM348_RS08710 PF12627 Probable RNA and SrmB- binding site of polymerase A AM348_RS08710 PF01743 Poly A polymerase head domain AM348_RS08710 PF01966 HD domain AM348_RS08715 PF08239 Bacterial SH3 domain AM348_RS08725 PF01928 CYTH domain AM348_RS08730 PF03710 Glutamate-ammonia ligase adenylyltransferase AM348_RS08730 PF08335 GlnD PII-uridylyltransferase AM348_RS08735 PF00294 pfkB family carbohydrate kinase AM348_RS08735 PF01467 Cytidylyltransferase-like AM348_RS08740 PF08971 Glycogen synthesis protein AM348_RS08745 PF04380 Membrane fusogenic activity AM348_RS08750 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM348_RS08755 PF02600 Disulfide bond formation protein DsbB AM348_RS08760 PF01323 DSBA-like thioredoxin domain AM348_RS08765 PF05935 Arylsulfotransferase (ASST) AM348_RS08765 PF17425 Arylsulfotransferase Ig-like domain AM348_RS08775 PF02535 ZIP Zinc transporter AM348_RS08780 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM348_RS08785 PF03738 Glutathionylspermidine synthase preATP-grasp AM348_RS08790 PF06693 Protein of unknown function (DUF1190) AM348_RS08800 PF02321 Outer membrane efflux protein AM348_RS08805 PF00293 NUDIX domain AM348_RS08810 PF06853 Protein of unknown function (DUF1249) AM348_RS08815 PF00149 Calcineurin-like phosphoesterase AM348_RS08820 PF05728 Uncharacterised protein family (UPF0227) AM348_RS08825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS08825 PF00986 DNA gyrase B subunit, carboxyl terminus AM348_RS08825 PF00204 DNA gyrase B AM348_RS08825 PF01751 Toprim domain AM348_RS08830 PF03992 Antibiotic biosynthesis monooxygenase AM348_RS08835 PF02525 Flavodoxin-like fold AM348_RS08840 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS08840 PF08521 Two-component sensor kinase N-terminal AM348_RS08840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS08845 PF00072 Response regulator receiver domain AM348_RS08845 PF00486 Transcriptional regulatory protein, C terminal AM348_RS08850 PF04076 Bacterial OB fold (BOF) protein AM348_RS08865 PF05638 Type VI secretion system effector, Hcp AM348_RS08870 PF00521 DNA gyrase/topoisomerase IV, subunit A AM348_RS08870 PF03989 DNA gyrase C-terminal domain, beta-propeller AM348_RS08875 PF01553 Acyltransferase AM348_RS08880 PF07731 Multicopper oxidase AM348_RS08880 PF00394 Multicopper oxidase AM348_RS08880 PF07732 Multicopper oxidase AM348_RS08885 PF02386 Cation transport protein AM348_RS08890 PF08497 Radical SAM N-terminal AM348_RS08890 PF11842 Domain of unknown function (DUF3362) AM348_RS08890 PF04055 Radical SAM superfamily AM348_RS08900 PF00939 Sodium:sulfate symporter transmembrane region AM348_RS08905 PF00248 Aldo/keto reductase family AM348_RS08910 PF00465 Iron-containing alcohol dehydrogenase AM348_RS08915 PF12833 Helix-turn-helix domain AM348_RS08915 PF06719 AraC-type transcriptional regulator N-terminus AM348_RS08920 PF09335 SNARE associated Golgi protein AM348_RS08925 PF01053 Cys/Met metabolism PLP-dependent enzyme AM348_RS08935 PF01618 MotA/TolQ/ExbB proton channel family AM348_RS08940 PF02472 Biopolymer transport protein ExbD/TolR AM348_RS08960 PF00248 Aldo/keto reductase family AM348_RS08965 PF01738 Dienelactone hydrolase family AM348_RS08970 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS08970 PF00672 HAMP domain AM348_RS08970 PF02203 Tar ligand binding domain homologue AM348_RS08975 PF11115 Protein of unknown function (DUF2623) AM348_RS08980 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM348_RS08980 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM348_RS08985 PF13247 4Fe-4S dicluster domain AM348_RS08990 PF03916 Polysulphide reductase, NrfD AM348_RS08995 PF00374 Nickel-dependent hydrogenase AM348_RS09000 PF01750 Hydrogenase maturation protease AM348_RS09005 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM348_RS09010 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM348_RS09015 PF01455 HupF/HypC family AM348_RS09020 PF02798 Glutathione S-transferase, N-terminal domain AM348_RS09025 PF00384 Molybdopterin oxidoreductase AM348_RS09030 PF05257 CHAP domain AM348_RS09030 PF03738 Glutathionylspermidine synthase preATP-grasp AM348_RS09065 PF08845 Toxin SymE, type I toxin-antitoxin system AM348_RS09080 PF04717 Type VI secretion system, phage-baseplate injector AM348_RS09100 PF05638 Type VI secretion system effector, Hcp AM348_RS09110 PF05943 Type VI secretion protein, EvpB/VC_A0108, tail sheath AM348_RS09120 PF05947 Type VI secretion system, TssF AM348_RS09160 PF04474 Protein of unknown function (DUF554) AM348_RS09170 PF01276 Orn/Lys/Arg decarboxylase, major domain AM348_RS09170 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM348_RS09170 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM348_RS09175 PF03825 Nucleoside H+ symporter AM348_RS09180 PF01464 Transglycosylase SLT domain AM348_RS09180 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM348_RS09185 PF04362 Bacterial Fe(2+) trafficking AM348_RS09190 PF00633 Helix-hairpin-helix motif AM348_RS09190 PF10576 Iron-sulfur binding domain of endonuclease III AM348_RS09190 PF14815 NUDIX domain AM348_RS09190 PF00730 HhH-GPD superfamily base excision DNA repair protein AM348_RS09195 PF02390 Putative methyltransferase AM348_RS09200 PF04320 Protein with unknown function (DUF469) AM348_RS09205 PF11101 Protein of unknown function (DUF2884) AM348_RS09210 PF17763 Glutaminase/Asparaginase C-terminal domain AM348_RS09210 PF00710 Asparaginase, N-terminal AM348_RS09215 PF04055 Radical SAM superfamily AM348_RS09215 PF06969 HemN C-terminal domain AM348_RS09220 PF01725 Ham1 family AM348_RS09225 PF02594 Uncharacterised ACR, YggU family COG1872 AM348_RS09230 PF02325 YGGT family AM348_RS09235 PF01168 Alanine racemase, N-terminal domain AM348_RS09240 PF00437 Type II/IV secretion system protein AM348_RS09245 PF03652 Holliday junction resolvase AM348_RS09250 PF02622 Uncharacterized ACR, COG1678 AM348_RS09255 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM348_RS09255 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM348_RS09260 PF04452 RNA methyltransferase AM348_RS09265 PF04231 Endonuclease I AM348_RS09270 PF10263 SprT-like family AM348_RS09270 PF17283 SprT-like zinc ribbon domain AM348_RS09275 PF00083 Sugar (and other) transporter AM348_RS09280 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM348_RS09280 PF02772 S-adenosylmethionine synthetase, central domain AM348_RS09280 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM348_RS09295 PF11036 Virulence promoting factor AM348_RS09300 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM348_RS09300 PF17944 Arginine decarboxylase C-terminal helical extension AM348_RS09300 PF17810 Arginine decarboxylase helical bundle domain AM348_RS09305 PF00491 Arginase family AM348_RS09310 PF01435 Peptidase family M48 AM348_RS09315 PF02780 Transketolase, C-terminal domain AM348_RS09315 PF00456 Transketolase, thiamine diphosphate binding domain AM348_RS09315 PF02779 Transketolase, pyrimidine binding domain AM348_RS09325 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM348_RS09325 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM348_RS09330 PF00162 Phosphoglycerate kinase AM348_RS09335 PF01116 Fructose-bisphosphate aldolase class-II AM348_RS09340 PF05552 Conserved TM helix AM348_RS09340 PF00924 Mechanosensitive ion channel AM348_RS09345 PF01810 LysE type translocator AM348_RS09350 PF04402 Protein of unknown function (DUF541) AM348_RS09355 PF03466 LysR substrate binding domain AM348_RS09355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS09360 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain AM348_RS09360 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain AM348_RS09365 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS09375 PF02310 B12 binding domain AM348_RS09375 PF01642 Methylmalonyl-CoA mutase AM348_RS09380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS09380 PF03466 LysR substrate binding domain AM348_RS09385 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM348_RS09390 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM348_RS09390 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM348_RS09390 PF01842 ACT domain AM348_RS09395 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM348_RS09405 PF05164 Cell division protein ZapA AM348_RS09415 PF03695 Uncharacterised protein family (UPF0149) AM348_RS09420 PF00557 Metallopeptidase family M24 AM348_RS09420 PF05195 Aminopeptidase P, N-terminal domain AM348_RS09425 PF01494 FAD binding domain AM348_RS09430 PF01494 FAD binding domain AM348_RS09440 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM348_RS09440 PF01571 Aminomethyltransferase folate-binding domain AM348_RS09445 PF01597 Glycine cleavage H-protein AM348_RS09450 PF02347 Glycine cleavage system P-protein AM348_RS09460 PF00232 Glycosyl hydrolase family 1 AM348_RS09465 PF01380 SIS domain AM348_RS09465 PF01418 Helix-turn-helix domain, rpiR family AM348_RS09470 PF04266 ASCH domain AM348_RS09475 PF03006 Haemolysin-III related AM348_RS09480 PF01571 Aminomethyltransferase folate-binding domain AM348_RS09490 PF03937 Flavinator of succinate dehydrogenase AM348_RS09495 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM348_RS09500 PF00258 Flavodoxin AM348_RS09505 PF02899 Phage integrase, N-terminal SAM-like domain AM348_RS09505 PF00589 Phage integrase family AM348_RS09510 PF10411 Disulfide bond isomerase protein N-terminus AM348_RS09510 PF13098 Thioredoxin-like domain AM348_RS09515 PF02272 DHHA1 domain AM348_RS09515 PF01368 DHH family AM348_RS09515 PF17768 RecJ OB domain AM348_RS09525 PF01336 OB-fold nucleic acid binding domain AM348_RS09525 PF00152 tRNA synthetases class II (D, K and N) AM348_RS09530 PF00293 NUDIX domain AM348_RS09535 PF01476 LysM domain AM348_RS09535 PF01551 Peptidase family M23 AM348_RS09555 PF14883 Hypothetical glycosyl hydrolase family 13 AM348_RS09555 PF01522 Polysaccharide deacetylase AM348_RS09560 PF00535 Glycosyl transferase family 2 AM348_RS09570 PF06902 Divergent 4Fe-4S mono-cluster AM348_RS09575 PF14542 GCN5-related N-acetyl-transferase AM348_RS09580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS09580 PF03466 LysR substrate binding domain AM348_RS09585 PF12796 Ankyrin repeats (3 copies) AM348_RS09590 PF11392 Protein of unknown function (DUF2877) AM348_RS09595 PF00549 CoA-ligase AM348_RS09595 PF02629 CoA binding domain AM348_RS09600 PF06545 Protein of unknown function (DUF1116) AM348_RS09610 PF00696 Amino acid kinase family AM348_RS09615 PF07969 Amidohydrolase family AM348_RS09620 PF03824 High-affinity nickel-transport protein AM348_RS09625 PF02583 Metal-sensitive transcriptional repressor AM348_RS09640 PF03222 Tryptophan/tyrosine permease family AM348_RS09650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS09650 PF03466 LysR substrate binding domain AM348_RS09655 PF00108 Thiolase, N-terminal domain AM348_RS09655 PF02803 Thiolase, C-terminal domain AM348_RS09660 PF04962 KduI/IolB family AM348_RS09670 PF00083 Sugar (and other) transporter AM348_RS09680 PF01177 Asp/Glu/Hydantoin racemase AM348_RS09685 PF03466 LysR substrate binding domain AM348_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS09690 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM348_RS09690 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM348_RS09695 PF00356 Bacterial regulatory proteins, lacI family AM348_RS09700 PF00356 Bacterial regulatory proteins, lacI family AM348_RS09710 PF01553 Acyltransferase AM348_RS09710 PF00501 AMP-binding enzyme AM348_RS09715 PF07690 Major Facilitator Superfamily AM348_RS09720 PF00248 Aldo/keto reductase family AM348_RS09725 PF06004 Bacterial protein of unknown function (DUF903) AM348_RS09730 PF03741 Integral membrane protein TerC family AM348_RS09735 PF02976 DNA mismatch repair enzyme MutH AM348_RS09745 PF00293 NUDIX domain AM348_RS09750 PF00391 PEP-utilising enzyme, mobile domain AM348_RS09750 PF02896 PEP-utilising enzyme, TIM barrel domain AM348_RS09750 PF01590 GAF domain AM348_RS09750 PF05524 PEP-utilising enzyme, N-terminal AM348_RS09755 PF01790 Prolipoprotein diacylglyceryl transferase AM348_RS09760 PF00303 Thymidylate synthase AM348_RS09765 PF07963 Prokaryotic N-terminal methylation motif AM348_RS09770 PF07963 Prokaryotic N-terminal methylation motif AM348_RS09775 PF10713 Protein of unknown function (DUF2509) AM348_RS09780 PF12528 Type II secretion prepilin peptidase dependent protein C AM348_RS09780 PF07963 Prokaryotic N-terminal methylation motif AM348_RS09785 PF17946 RecC C-terminal domain AM348_RS09790 PF00675 Insulinase (Peptidase family M16) AM348_RS09790 PF05193 Peptidase M16 inactive domain AM348_RS09790 PF16187 Middle or third domain of peptidase_M16 AM348_RS09795 PF12705 PD-(D/E)XK nuclease superfamily AM348_RS09795 PF13361 UvrD-like helicase C-terminal domain AM348_RS09795 PF00580 UvrD/REP helicase N-terminal domain AM348_RS09800 PF13538 UvrD-like helicase C-terminal domain AM348_RS09805 PF00696 Amino acid kinase family AM348_RS09805 PF00583 Acetyltransferase (GNAT) family AM348_RS09810 PF01520 N-acetylmuramoyl-L-alanine amidase AM348_RS09810 PF11741 AMIN domain AM348_RS09830 PF06725 3D domain AM348_RS09830 PF03562 MltA specific insert domain AM348_RS09835 PF00899 ThiF family AM348_RS09840 PF02657 Fe-S metabolism associated domain AM348_RS09845 PF00266 Aminotransferase class-V AM348_RS09850 PF06004 Bacterial protein of unknown function (DUF903) AM348_RS09855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS09855 PF03466 LysR substrate binding domain AM348_RS09860 PF04241 Protein of unknown function (DUF423) AM348_RS09865 PF01728 FtsJ-like methyltransferase AM348_RS09865 PF18125 RlmM ferredoxin-like domain AM348_RS09870 PF08220 DeoR-like helix-turn-helix domain AM348_RS09870 PF00455 DeoR C terminal sensor domain AM348_RS09875 PF05025 RbsD / FucU transport protein family AM348_RS09880 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS09880 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS09885 PF07882 L-fucose isomerase, second N-terminal domain AM348_RS09885 PF07881 L-fucose isomerase, first N-terminal domain AM348_RS09885 PF02952 L-fucose isomerase, C-terminal domain AM348_RS09890 PF07690 Major Facilitator Superfamily AM348_RS09900 PF00596 Class II Aldolase and Adducin N-terminal domain AM348_RS09905 PF00465 Iron-containing alcohol dehydrogenase AM348_RS09910 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM348_RS09910 PF01367 5'-3' exonuclease, C-terminal SAM fold AM348_RS09920 PF03313 Serine dehydratase alpha chain AM348_RS09920 PF03315 Serine dehydratase beta chain AM348_RS09930 PF11892 Domain of unknown function (DUF3412) AM348_RS09930 PF03641 Possible lysine decarboxylase AM348_RS09930 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM348_RS09935 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM348_RS09935 PF14489 QueF-like protein AM348_RS09940 PF07348 Syd protein (SUKH-2) AM348_RS09945 PF04287 tRNA pseudouridine synthase C AM348_RS09950 PF00849 RNA pseudouridylate synthase AM348_RS09955 PF00258 Flavodoxin AM348_RS09965 PF07690 Major Facilitator Superfamily AM348_RS09970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM348_RS09970 PF13378 Enolase C-terminal domain-like AM348_RS09975 PF13378 Enolase C-terminal domain-like AM348_RS09980 PF02595 Glycerate kinase family AM348_RS09985 PF00672 HAMP domain AM348_RS09985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS09985 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM348_RS09985 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS09985 PF01627 Hpt domain AM348_RS09985 PF00072 Response regulator receiver domain AM348_RS09990 PF01938 TRAM domain AM348_RS09990 PF05958 tRNA (Uracil-5-)-methyltransferase AM348_RS09995 PF02824 TGS domain AM348_RS09995 PF04607 Region found in RelA / SpoT proteins AM348_RS09995 PF13291 ACT domain AM348_RS10000 PF03819 MazG nucleotide pyrophosphohydrolase domain AM348_RS10010 PF06418 CTP synthase N-terminus AM348_RS10010 PF00117 Glutamine amidotransferase class-I AM348_RS10015 PF00113 Enolase, C-terminal TIM barrel domain AM348_RS10015 PF03952 Enolase, N-terminal domain AM348_RS10035 PF01418 Helix-turn-helix domain, rpiR family AM348_RS10035 PF01380 SIS domain AM348_RS10040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM348_RS10040 PF02378 Phosphotransferase system, EIIC AM348_RS10040 PF00367 phosphotransferase system, EIIB AM348_RS10045 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM348_RS10050 PF04055 Radical SAM superfamily AM348_RS10055 PF01242 6-pyruvoyl tetrahydropterin synthase AM348_RS10065 PF00258 Flavodoxin AM348_RS10065 PF00175 Oxidoreductase NAD-binding domain AM348_RS10065 PF00667 FAD binding domain AM348_RS10070 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM348_RS10070 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM348_RS10080 PF01507 Phosphoadenosine phosphosulfate reductase family AM348_RS10085 PF04389 Peptidase family M28 AM348_RS10090 PF01507 Phosphoadenosine phosphosulfate reductase family AM348_RS10095 PF00009 Elongation factor Tu GTP binding domain AM348_RS10105 PF12084 Protein of unknown function (DUF3561) AM348_RS10110 PF04977 Septum formation initiator AM348_RS10115 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM348_RS10120 PF02542 YgbB family AM348_RS10125 PF01142 tRNA pseudouridine synthase D (TruD) AM348_RS10130 PF01975 Survival protein SurE AM348_RS10140 PF01476 LysM domain AM348_RS10140 PF01551 Peptidase family M23 AM348_RS10145 PF04539 Sigma-70 region 3 AM348_RS10145 PF04545 Sigma-70, region 4 AM348_RS10145 PF04542 Sigma-70 region 2 AM348_RS10145 PF00140 Sigma-70 factor, region 1.2 AM348_RS10150 PF01047 MarR family AM348_RS10155 PF02441 Flavoprotein AM348_RS10160 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM348_RS10170 PF05192 MutS domain III AM348_RS10170 PF01624 MutS domain I AM348_RS10170 PF00488 MutS domain V AM348_RS10170 PF05190 MutS family domain IV AM348_RS10170 PF05188 MutS domain II AM348_RS10195 PF03412 Peptidase C39 family AM348_RS10195 PF00664 ABC transporter transmembrane region AM348_RS10195 PF00005 ABC transporter AM348_RS10200 PF02321 Outer membrane efflux protein AM348_RS10215 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS10215 PF00563 EAL domain AM348_RS10215 PF03707 Bacterial signalling protein N terminal repeat AM348_RS10215 PF13188 PAS domain AM348_RS10225 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS10230 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS10235 PF13188 PAS domain AM348_RS10235 PF03707 Bacterial signalling protein N terminal repeat AM348_RS10235 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS10235 PF00563 EAL domain AM348_RS10240 PF00563 EAL domain AM348_RS10240 PF05231 MASE1 AM348_RS10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS10245 PF00672 HAMP domain AM348_RS10245 PF02743 Cache domain AM348_RS10250 PF00072 Response regulator receiver domain AM348_RS10250 PF01339 CheB methylesterase AM348_RS10255 PF01739 CheR methyltransferase, SAM binding domain AM348_RS10255 PF03705 CheR methyltransferase, all-alpha domain AM348_RS10260 PF00072 Response regulator receiver domain AM348_RS10260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS10260 PF01584 CheW-like domain AM348_RS10260 PF01627 Hpt domain AM348_RS10265 PF00072 Response regulator receiver domain AM348_RS10265 PF00486 Transcriptional regulatory protein, C terminal AM348_RS10270 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS10270 PF00072 Response regulator receiver domain AM348_RS10285 PF00144 Beta-lactamase AM348_RS10295 PF00950 ABC 3 transport family AM348_RS10300 PF00950 ABC 3 transport family AM348_RS10305 PF00005 ABC transporter AM348_RS10310 PF01297 Zinc-uptake complex component A periplasmic AM348_RS10315 PF11756 Nitrous oxide-stimulated promoter AM348_RS10325 PF00158 Sigma-54 interaction domain AM348_RS10325 PF02954 Bacterial regulatory protein, Fis family AM348_RS10325 PF01590 GAF domain AM348_RS10330 PF00586 AIR synthase related protein, N-terminal domain AM348_RS10330 PF02769 AIR synthase related protein, C-terminal domain AM348_RS10335 PF01924 Hydrogenase formation hypA family AM348_RS10340 PF01455 HupF/HypC family AM348_RS10345 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM348_RS10350 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM348_RS10355 PF11046 Transcriptional repressor of hyc and hyp operons AM348_RS10360 PF13247 4Fe-4S dicluster domain AM348_RS10365 PF00361 Proton-conducting membrane transporter AM348_RS10370 PF00146 NADH dehydrogenase AM348_RS10375 PF00374 Nickel-dependent hydrogenase AM348_RS10375 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM348_RS10375 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM348_RS10380 PF12838 4Fe-4S dicluster domain AM348_RS10385 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM348_RS10390 PF07450 Formate hydrogenlyase maturation protein HycH AM348_RS10395 PF01750 Hydrogenase maturation protease AM348_RS10400 PF08845 Toxin SymE, type I toxin-antitoxin system AM348_RS10405 PF00232 Glycosyl hydrolase family 1 AM348_RS10410 PF00367 phosphotransferase system, EIIB AM348_RS10410 PF02378 Phosphotransferase system, EIIC AM348_RS10415 PF00356 Bacterial regulatory proteins, lacI family AM348_RS10420 PF13247 4Fe-4S dicluster domain AM348_RS10420 PF12800 4Fe-4S binding domain AM348_RS10425 PF17788 HypF Kae1-like domain AM348_RS10425 PF07503 HypF finger AM348_RS10425 PF00708 Acylphosphatase AM348_RS10425 PF01300 Telomere recombination AM348_RS10430 PF18113 Rubredoxin binding C-terminal domain AM348_RS10430 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS10435 PF00258 Flavodoxin AM348_RS10435 PF00753 Metallo-beta-lactamase superfamily AM348_RS10435 PF00301 Rubredoxin AM348_RS10445 PF00158 Sigma-54 interaction domain AM348_RS10445 PF01590 GAF domain AM348_RS10450 PF00571 CBS domain AM348_RS10450 PF01380 SIS domain AM348_RS10455 PF00455 DeoR C terminal sensor domain AM348_RS10455 PF08220 DeoR-like helix-turn-helix domain AM348_RS10460 PF06923 Glucitol operon activator protein (GutM) AM348_RS10465 PF00106 short chain dehydrogenase AM348_RS10470 PF03829 PTS system glucitol/sorbitol-specific IIA component AM348_RS10475 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM348_RS10475 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM348_RS10480 PF03608 PTS system enzyme II sorbitol-specific factor AM348_RS10485 PF13406 Transglycosylase SLT domain AM348_RS10490 PF02464 Competence-damaged protein AM348_RS10495 PF00154 recA bacterial DNA recombination protein AM348_RS10500 PF02631 RecX family AM348_RS10505 PF02272 DHHA1 domain AM348_RS10505 PF01411 tRNA synthetases class II (A) AM348_RS10505 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM348_RS10510 PF02599 Global regulator protein family AM348_RS10540 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS10545 PF09335 SNARE associated Golgi protein AM348_RS10550 PF04262 Glutamate-cysteine ligase AM348_RS10555 PF02664 S-Ribosylhomocysteinase (LuxS) AM348_RS10565 PF07690 Major Facilitator Superfamily AM348_RS10570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS10570 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS10575 PF01047 MarR family AM348_RS10580 PF05437 Branched-chain amino acid transport protein (AzlD) AM348_RS10585 PF03591 AzlC protein AM348_RS10590 PF07690 Major Facilitator Superfamily AM348_RS10595 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM348_RS10600 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS10605 PF00571 CBS domain AM348_RS10605 PF00005 ABC transporter AM348_RS10615 PF00268 Ribonucleotide reductase, small chain AM348_RS10620 PF08343 Ribonucleotide reductase N-terminal AM348_RS10620 PF02867 Ribonucleotide reductase, barrel domain AM348_RS10620 PF00317 Ribonucleotide reductase, all-alpha domain AM348_RS10625 PF07972 NrdI Flavodoxin like AM348_RS10630 PF00462 Glutaredoxin AM348_RS10635 PF02627 Carboxymuconolactone decarboxylase family AM348_RS10640 PF00155 Aminotransferase class I and II AM348_RS10640 PF00392 Bacterial regulatory proteins, gntR family AM348_RS10645 PF09400 Protein of unknown function (DUF2002) AM348_RS10650 PF06610 L-alanine exporter AM348_RS10655 PF00816 H-NS histone family AM348_RS10665 PF11127 Protein of unknown function (DUF2892) AM348_RS10665 PF00581 Rhodanese-like domain AM348_RS10670 PF01022 Bacterial regulatory protein, arsR family AM348_RS10675 PF01679 Proteolipid membrane potential modulator AM348_RS10680 PF04972 BON domain AM348_RS10680 PF01476 LysM domain AM348_RS10685 PF00392 Bacterial regulatory proteins, gntR family AM348_RS10685 PF07729 FCD domain AM348_RS10690 PF00324 Amino acid permease AM348_RS10700 PF00202 Aminotransferase class-III AM348_RS10705 PF00171 Aldehyde dehydrogenase family AM348_RS10710 PF01266 FAD dependent oxidoreductase AM348_RS10715 PF08943 CsiD AM348_RS10725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS10725 PF03466 LysR substrate binding domain AM348_RS10730 PF01970 Tripartite tricarboxylate transporter TctA family AM348_RS10745 PF00486 Transcriptional regulatory protein, C terminal AM348_RS10745 PF00072 Response regulator receiver domain AM348_RS10750 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS10755 PF02397 Bacterial sugar transferase AM348_RS10790 PF00534 Glycosyl transferases group 1 AM348_RS10795 PF13439 Glycosyltransferase Family 4 AM348_RS10795 PF00534 Glycosyl transferases group 1 AM348_RS10810 PF16363 GDP-mannose 4,6 dehydratase AM348_RS10820 PF00484 Carbonic anhydrase AM348_RS10825 PF00155 Aminotransferase class I and II AM348_RS10830 PF03553 Na+/H+ antiporter family AM348_RS10835 PF12833 Helix-turn-helix domain AM348_RS10850 PF00158 Sigma-54 interaction domain AM348_RS10850 PF13188 PAS domain AM348_RS10850 PF02954 Bacterial regulatory protein, Fis family AM348_RS10855 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS10860 PF07687 Peptidase dimerisation domain AM348_RS10860 PF01546 Peptidase family M20/M25/M40 AM348_RS10865 PF07969 Amidohydrolase family AM348_RS10870 PF07690 Major Facilitator Superfamily AM348_RS10885 PF00072 Response regulator receiver domain AM348_RS10885 PF00196 Bacterial regulatory proteins, luxR family AM348_RS10890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS10890 PF01627 Hpt domain AM348_RS10890 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS10890 PF00072 Response regulator receiver domain AM348_RS10890 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS10895 PF10938 YfdX protein AM348_RS10910 PF00873 AcrB/AcrD/AcrF family AM348_RS10915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS10915 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS10920 PF03843 Outer membrane lipoprotein Slp family AM348_RS10930 PF00171 Aldehyde dehydrogenase family AM348_RS10935 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS10935 PF00205 Thiamine pyrophosphate enzyme, central domain AM348_RS10935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS10945 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM348_RS10945 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS10950 PF13407 Periplasmic binding protein domain AM348_RS10955 PF00005 ABC transporter AM348_RS10960 PF02653 Branched-chain amino acid transport system / permease component AM348_RS10965 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM348_RS10965 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS10970 PF00294 pfkB family carbohydrate kinase AM348_RS10975 PF01261 Xylose isomerase-like TIM barrel AM348_RS10980 PF04962 KduI/IolB family AM348_RS10985 PF09134 Invasin, domain 3 AM348_RS10985 PF02369 Bacterial Ig-like domain (group 1) AM348_RS10985 PF11924 Inverse autotransporter, beta-domain AM348_RS10995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS10995 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS11000 PF00005 ABC transporter AM348_RS11000 PF00664 ABC transporter transmembrane region AM348_RS11015 PF01668 SmpB protein AM348_RS11020 PF03364 Polyketide cyclase / dehydrase and lipid transport AM348_RS11025 PF03658 RnfH family Ubiquitin AM348_RS11030 PF04355 SmpA / OmlA family AM348_RS11035 PF02463 RecF/RecN/SMC N terminal domain AM348_RS11040 PF01513 ATP-NAD kinase AM348_RS11050 PF01025 GrpE AM348_RS11055 PF01595 Cyclin M transmembrane N-terminal domain AM348_RS11055 PF00571 CBS domain AM348_RS11055 PF03471 Transporter associated domain AM348_RS11060 PF01578 Cytochrome C assembly protein AM348_RS11065 PF02978 Signal peptide binding domain AM348_RS11065 PF00448 SRP54-type protein, GTPase domain AM348_RS11065 PF02881 SRP54-type protein, helical bundle domain AM348_RS11070 PF00886 Ribosomal protein S16 AM348_RS11075 PF05239 PRC-barrel domain AM348_RS11075 PF01782 RimM N-terminal domain AM348_RS11080 PF01746 tRNA (Guanine-1)-methyltransferase AM348_RS11085 PF01245 Ribosomal protein L19 AM348_RS11090 PF00691 OmpA family AM348_RS11095 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS11095 PF17152 Periplasmic sensor domain AM348_RS11100 PF13689 YfiR/HmsC-like AM348_RS11105 PF10973 Protein of unknown function (DUF2799) AM348_RS11110 PF00793 DAHP synthetase I family AM348_RS11115 PF01817 Chorismate mutase type II AM348_RS11115 PF02153 Prephenate dehydrogenase AM348_RS11120 PF00800 Prephenate dehydratase AM348_RS11120 PF01817 Chorismate mutase type II AM348_RS11130 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM348_RS11135 PF13525 Outer membrane lipoprotein AM348_RS11140 PF01479 S4 domain AM348_RS11140 PF00849 RNA pseudouridylate synthase AM348_RS11145 PF02578 Multi-copper polyphenol oxidoreductase laccase AM348_RS11150 PF02861 Clp amino terminal domain, pathogenicity island component AM348_RS11150 PF07724 AAA domain (Cdc48 subfamily) AM348_RS11150 PF00004 ATPase family associated with various cellular activities (AAA) AM348_RS11150 PF10431 C-terminal, D2-small domain, of ClpB protein AM348_RS11150 PF17871 AAA lid domain AM348_RS11175 PF00083 Sugar (and other) transporter AM348_RS11180 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM348_RS11185 PF13091 PLD-like domain AM348_RS11190 PF13607 Succinyl-CoA ligase like flavodoxin domain AM348_RS11190 PF00583 Acetyltransferase (GNAT) family AM348_RS11190 PF13380 CoA binding domain AM348_RS11195 PF03942 DTW domain AM348_RS11200 PF00085 Thioredoxin AM348_RS11210 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM348_RS11210 PF00588 SpoU rRNA Methylase family AM348_RS11215 PF03167 Uracil DNA glycosylase superfamily AM348_RS11220 PF01228 Glycine radical AM348_RS11225 PF01810 LysE type translocator AM348_RS11230 PF03466 LysR substrate binding domain AM348_RS11230 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS11235 PF00270 DEAD/DEAH box helicase AM348_RS11235 PF00271 Helicase conserved C-terminal domain AM348_RS11240 PF05175 Methyltransferase small domain AM348_RS11245 PF00890 FAD binding domain AM348_RS11245 PF02910 Fumarate reductase flavoprotein C-term AM348_RS11255 PF08281 Sigma-70, region 4 AM348_RS11255 PF04542 Sigma-70 region 2 AM348_RS11260 PF03872 Anti sigma-E protein RseA, N-terminal domain AM348_RS11260 PF03873 Anti sigma-E protein RseA, C-terminal domain AM348_RS11265 PF03888 MucB/RseB N-terminal domain AM348_RS11265 PF17188 MucB/RseB C-terminal domain AM348_RS11275 PF06421 GTP-binding protein LepA C-terminus AM348_RS11275 PF00679 Elongation factor G C-terminus AM348_RS11275 PF00009 Elongation factor Tu GTP binding domain AM348_RS11275 PF03144 Elongation factor Tu domain 2 AM348_RS11280 PF10502 Signal peptidase, peptidase S26 AM348_RS11290 PF14622 Ribonuclease-III-like AM348_RS11290 PF00035 Double-stranded RNA binding motif AM348_RS11295 PF07650 KH domain AM348_RS11295 PF01926 50S ribosome-binding GTPase AM348_RS11300 PF02565 Recombination protein O C terminal AM348_RS11300 PF11967 Recombination protein O N terminal AM348_RS11305 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM348_RS11310 PF01648 4'-phosphopantetheinyl transferase superfamily AM348_RS11315 PF12838 4Fe-4S dicluster domain AM348_RS11320 PF01380 SIS domain AM348_RS11320 PF01418 Helix-turn-helix domain, rpiR family AM348_RS11325 PF01380 SIS domain AM348_RS11330 PF02378 Phosphotransferase system, EIIC AM348_RS11330 PF00367 phosphotransferase system, EIIB AM348_RS11340 PF14437 MafB19-like deaminase AM348_RS11345 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS11345 PF01464 Transglycosylase SLT domain AM348_RS11350 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM348_RS11350 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM348_RS11350 PF02769 AIR synthase related protein, C-terminal domain AM348_RS11355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS11355 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS11360 PF13942 YfhG lipoprotein AM348_RS11365 PF00158 Sigma-54 interaction domain AM348_RS11365 PF00072 Response regulator receiver domain AM348_RS11370 PF00543 Nitrogen regulatory protein P-II AM348_RS11375 PF00042 Globin AM348_RS11375 PF00970 Oxidoreductase FAD-binding domain AM348_RS11375 PF00175 Oxidoreductase NAD-binding domain AM348_RS11380 PF00464 Serine hydroxymethyltransferase AM348_RS11385 PF14759 Reductase C-terminal AM348_RS11385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS11390 PF00106 short chain dehydrogenase AM348_RS11395 PF00355 Rieske [2Fe-2S] domain AM348_RS11400 PF00866 Ring hydroxylating beta subunit AM348_RS11405 PF00355 Rieske [2Fe-2S] domain AM348_RS11405 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM348_RS11410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS11410 PF03466 LysR substrate binding domain AM348_RS11415 PF00419 Fimbrial protein AM348_RS11420 PF13953 PapC C-terminal domain AM348_RS11420 PF00577 Outer membrane usher protein AM348_RS11420 PF13954 PapC N-terminal domain AM348_RS11425 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS11425 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS11430 PF00419 Fimbrial protein AM348_RS11435 PF12832 MFS_1 like family AM348_RS11440 PF00874 PRD domain AM348_RS11450 PF01380 SIS domain AM348_RS11450 PF00571 CBS domain AM348_RS11455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS11455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS11460 PF02653 Branched-chain amino acid transport system / permease component AM348_RS11465 PF02653 Branched-chain amino acid transport system / permease component AM348_RS11470 PF00005 ABC transporter AM348_RS11480 PF06226 Protein of unknown function (DUF1007) AM348_RS11485 PF03824 High-affinity nickel-transport protein AM348_RS11490 PF00459 Inositol monophosphatase family AM348_RS11495 PF00588 SpoU rRNA Methylase family AM348_RS11500 PF02082 Transcriptional regulator AM348_RS11505 PF00266 Aminotransferase class-V AM348_RS11510 PF01592 NifU-like N terminal domain AM348_RS11515 PF01521 Iron-sulphur cluster biosynthesis AM348_RS11525 PF07743 HSCB C-terminal oligomerisation domain AM348_RS11530 PF00012 Hsp70 protein AM348_RS11535 PF00111 2Fe-2S iron-sulfur cluster binding domain AM348_RS11540 PF04384 Iron-sulphur cluster assembly AM348_RS11545 PF00883 Cytosol aminopeptidase family, catalytic domain AM348_RS11545 PF12404 Peptidase AM348_RS11550 PF14581 SseB protein C-terminal domain AM348_RS11550 PF07179 SseB protein N-terminal domain AM348_RS11555 PF00581 Rhodanese-like domain AM348_RS11560 PF01835 MG2 domain AM348_RS11560 PF17962 Bacterial macroglobulin domain 6 AM348_RS11560 PF07703 Alpha-2-macroglobulin bait region domain AM348_RS11560 PF00207 Alpha-2-macroglobulin family AM348_RS11560 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM348_RS11560 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM348_RS11560 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM348_RS11560 PF07678 A-macroglobulin TED domain AM348_RS11560 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM348_RS11565 PF00912 Transglycosylase AM348_RS11565 PF00905 Penicillin binding protein transpeptidase domain AM348_RS11565 PF06832 Penicillin-Binding Protein C-terminus Family AM348_RS11570 PF00334 Nucleoside diphosphate kinase AM348_RS11575 PF04055 Radical SAM superfamily AM348_RS11580 PF13464 Domain of unknown function (DUF4115) AM348_RS11585 PF04551 GcpE protein AM348_RS11590 PF03129 Anticodon binding domain AM348_RS11590 PF13393 Histidyl-tRNA synthetase AM348_RS11595 PF09976 Tetratricopeptide repeat-like domain AM348_RS11600 PF13360 PQQ-like domain AM348_RS11610 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM348_RS11610 PF01926 50S ribosome-binding GTPase AM348_RS11615 PF00854 POT family AM348_RS11625 PF07191 zinc-ribbons AM348_RS11630 PF13742 OB-fold nucleic acid binding domain AM348_RS11630 PF02601 Exonuclease VII, large subunit AM348_RS11635 PF00571 CBS domain AM348_RS11635 PF00478 IMP dehydrogenase / GMP reductase domain AM348_RS11640 PF02540 NAD synthase AM348_RS11640 PF00958 GMP synthase C terminal domain AM348_RS11640 PF00117 Glutamine amidotransferase class-I AM348_RS11645 PF00924 Mechanosensitive ion channel AM348_RS11645 PF05552 Conserved TM helix AM348_RS11650 PF11119 Protein of unknown function (DUF2633) AM348_RS11655 PF05231 MASE1 AM348_RS11655 PF00563 EAL domain AM348_RS11660 PF02541 Ppx/GppA phosphatase family AM348_RS11665 PF02503 Polyphosphate kinase middle domain AM348_RS11665 PF13089 Polyphosphate kinase N-terminal domain AM348_RS11665 PF17941 Polyphosphate kinase C-terminal domain 1 AM348_RS11665 PF13090 Polyphosphate kinase C-terminal domain 2 AM348_RS11670 PF00551 Formyl transferase AM348_RS11675 PF00586 AIR synthase related protein, N-terminal domain AM348_RS11675 PF02769 AIR synthase related protein, C-terminal domain AM348_RS11680 PF00232 Glycosyl hydrolase family 1 AM348_RS11690 PF00860 Permease family AM348_RS11695 PF00308 Bacterial dnaA protein AM348_RS11700 PF03960 ArsC family AM348_RS11705 PF01435 Peptidase family M48 AM348_RS11710 PF01594 AI-2E family transporter AM348_RS11715 PF07670 Nucleoside recognition AM348_RS11720 PF07670 Nucleoside recognition AM348_RS11725 PF01979 Amidohydrolase family AM348_RS11730 PF00578 AhpC/TSA family AM348_RS11735 PF01842 ACT domain AM348_RS11740 PF00701 Dihydrodipicolinate synthetase family AM348_RS11745 PF06804 NlpB/DapX lipoprotein AM348_RS11750 PF01259 SAICAR synthetase AM348_RS11755 PF04228 Putative neutral zinc metallopeptidase AM348_RS11760 PF08351 Domain of unknown function (DUF1726) AM348_RS11760 PF13718 GNAT acetyltransferase 2 AM348_RS11760 PF05127 Helicase AM348_RS11760 PF17176 tRNA-binding domain AM348_RS11765 PF02230 Phospholipase/Carboxylesterase AM348_RS11770 PF13980 Uncharacterised protein family (UPF0370) AM348_RS11775 PF07687 Peptidase dimerisation domain AM348_RS11775 PF01546 Peptidase family M20/M25/M40 AM348_RS11780 PF03960 ArsC family AM348_RS11790 PF00873 AcrB/AcrD/AcrF family AM348_RS11795 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS11795 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM348_RS11795 PF07730 Histidine kinase AM348_RS11795 PF00672 HAMP domain AM348_RS11800 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM348_RS11800 PF13247 4Fe-4S dicluster domain AM348_RS11800 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS11805 PF00293 NUDIX domain AM348_RS11810 PF06674 Protein of unknown function (DUF1176) AM348_RS11815 PF00456 Transketolase, thiamine diphosphate binding domain AM348_RS11815 PF02780 Transketolase, C-terminal domain AM348_RS11815 PF02779 Transketolase, pyrimidine binding domain AM348_RS11825 PF00390 Malic enzyme, N-terminal domain AM348_RS11825 PF03949 Malic enzyme, NAD binding domain AM348_RS11825 PF01515 Phosphate acetyl/butaryl transferase AM348_RS11830 PF00936 BMC domain AM348_RS11835 PF10662 Ethanolamine utilisation - propanediol utilisation AM348_RS11840 PF06249 Ethanolamine utilisation protein EutQ AM348_RS11845 PF01923 Cobalamin adenosyltransferase AM348_RS11850 PF01515 Phosphate acetyl/butaryl transferase AM348_RS11855 PF00936 BMC domain AM348_RS11860 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM348_RS11865 PF00171 Aldehyde dehydrogenase family AM348_RS11875 PF00465 Iron-containing alcohol dehydrogenase AM348_RS11880 PF04346 Ethanolamine utilisation protein, EutH AM348_RS11885 PF06277 Ethanolamine utilisation protein EutA AM348_RS11890 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM348_RS11895 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM348_RS11900 PF00936 BMC domain AM348_RS11905 PF00936 BMC domain AM348_RS11905 PF16365 Ethanolamine utilization protein EutK C-terminus AM348_RS11910 PF12833 Helix-turn-helix domain AM348_RS11920 PF01218 Coproporphyrinogen III oxidase AM348_RS11925 PF01520 N-acetylmuramoyl-L-alanine amidase AM348_RS11930 PF00583 Acetyltransferase (GNAT) family AM348_RS11935 PF11143 Protein of unknown function (DUF2919) AM348_RS11940 PF06572 Protein of unknown function (DUF1131) AM348_RS11945 PF04261 Dyp-type peroxidase family AM348_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS11965 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS11970 PF00005 ABC transporter AM348_RS11975 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS11980 PF00117 Glutamine amidotransferase class-I AM348_RS11985 PF00155 Aminotransferase class I and II AM348_RS11985 PF00392 Bacterial regulatory proteins, gntR family AM348_RS11990 PF08543 Phosphomethylpyrimidine kinase AM348_RS12000 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM348_RS12005 PF02896 PEP-utilising enzyme, TIM barrel domain AM348_RS12005 PF00391 PEP-utilising enzyme, mobile domain AM348_RS12005 PF05524 PEP-utilising enzyme, N-terminal AM348_RS12010 PF00381 PTS HPr component phosphorylation site AM348_RS12015 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS12025 PF04354 ZipA, C-terminal FtsZ-binding domain AM348_RS12030 PF12826 Helix-hairpin-helix motif AM348_RS12030 PF03120 NAD-dependent DNA ligase OB-fold domain AM348_RS12030 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM348_RS12030 PF01653 NAD-dependent DNA ligase adenylation domain AM348_RS12030 PF00533 BRCA1 C Terminus (BRCT) domain AM348_RS12035 PF12843 Putative quorum-sensing-regulated virulence factor AM348_RS12040 PF13593 SBF-like CPA transporter family (DUF4137) AM348_RS12045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS12045 PF03466 LysR substrate binding domain AM348_RS12065 PF01048 Phosphorylase superfamily AM348_RS12070 PF03825 Nucleoside H+ symporter AM348_RS12075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS12075 PF03466 LysR substrate binding domain AM348_RS12100 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM348_RS12105 PF07037 Putative transcription regulator (DUF1323) AM348_RS12110 PF07037 Putative transcription regulator (DUF1323) AM348_RS12130 PF01773 Na+ dependent nucleoside transporter N-terminus AM348_RS12130 PF07662 Na+ dependent nucleoside transporter C-terminus AM348_RS12130 PF07670 Nucleoside recognition AM348_RS12135 PF01566 Natural resistance-associated macrophage protein AM348_RS12140 PF10697 Protein of unknown function (DUF2502) AM348_RS12145 PF00248 Aldo/keto reductase family AM348_RS12150 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS12150 PF00205 Thiamine pyrophosphate enzyme, central domain AM348_RS12150 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS12155 PF00654 Voltage gated chloride channel AM348_RS12160 PF02685 Glucokinase AM348_RS12170 PF00072 Response regulator receiver domain AM348_RS12170 PF04397 LytTr DNA-binding domain AM348_RS12175 PF06580 Histidine kinase AM348_RS12175 PF07694 5TMR of 5TMR-LYT AM348_RS12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS12180 PF00155 Aminotransferase class I and II AM348_RS12195 PF03279 Bacterial lipid A biosynthesis acyltransferase AM348_RS12200 PF10810 Protein of unknown function (DUF2545) AM348_RS12205 PF07690 Major Facilitator Superfamily AM348_RS12220 PF00672 HAMP domain AM348_RS12220 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS12220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS12225 PF02954 Bacterial regulatory protein, Fis family AM348_RS12225 PF00072 Response regulator receiver domain AM348_RS12225 PF14532 Sigma-54 interaction domain AM348_RS12230 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM348_RS12235 PF00672 HAMP domain AM348_RS12235 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS12235 PF02203 Tar ligand binding domain homologue AM348_RS12245 PF01112 Asparaginase AM348_RS12305 PF01757 Acyltransferase family AM348_RS12325 PF01226 Formate/nitrite transporter AM348_RS12330 PF04333 MlaA lipoprotein AM348_RS12335 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM348_RS12345 PF04175 Protein of unknown function (DUF406) AM348_RS12350 PF02803 Thiolase, C-terminal domain AM348_RS12350 PF00108 Thiolase, N-terminal domain AM348_RS12355 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS12355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM348_RS12355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM348_RS12360 PF00300 Histidine phosphatase superfamily (branch 1) AM348_RS12365 PF01713 Smr domain AM348_RS12370 PF05175 Methyltransferase small domain AM348_RS12375 PF01264 Chorismate synthase AM348_RS12380 PF03411 Penicillin-insensitive murein endopeptidase AM348_RS12385 PF01925 Sulfite exporter TauE/SafE AM348_RS12390 PF04315 Elongation factor P hydroxylase AM348_RS12395 PF08891 YfcL protein AM348_RS12400 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM348_RS12400 PF01266 FAD dependent oxidoreductase AM348_RS12405 PF02801 Beta-ketoacyl synthase, C-terminal domain AM348_RS12405 PF00109 Beta-ketoacyl synthase, N-terminal domain AM348_RS12410 PF07690 Major Facilitator Superfamily AM348_RS12420 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM348_RS12420 PF11890 Domain of unknown function (DUF3410) AM348_RS12420 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM348_RS12425 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM348_RS12425 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM348_RS12430 PF01416 tRNA pseudouridine synthase AM348_RS12435 PF09335 SNARE associated Golgi protein AM348_RS12440 PF01039 Carboxyl transferase domain AM348_RS12440 PF17848 Acetyl-coA carboxylase zinc finger domain AM348_RS12445 PF02875 Mur ligase family, glutamate ligase domain AM348_RS12445 PF08245 Mur ligase middle domain AM348_RS12450 PF05036 Sporulation related domain AM348_RS12455 PF02674 Colicin V production protein AM348_RS12460 PF00156 Phosphoribosyl transferase domain AM348_RS12465 PF02441 Flavoprotein AM348_RS12470 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS12475 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS12480 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS12485 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS12490 PF00005 ABC transporter AM348_RS12495 PF13302 Acetyltransferase (GNAT) domain AM348_RS12500 PF01370 NAD dependent epimerase/dehydratase family AM348_RS12500 PF08338 Domain of unknown function (DUF1731) AM348_RS12505 PF02152 Dihydroneopterin aldolase AM348_RS12510 PF00043 Glutathione S-transferase, C-terminal domain AM348_RS12510 PF02798 Glutathione S-transferase, N-terminal domain AM348_RS12515 PF14834 Glutathione S-transferase, C-terminal domain AM348_RS12515 PF02798 Glutathione S-transferase, N-terminal domain AM348_RS12520 PF12850 Calcineurin-like phosphoesterase superfamily domain AM348_RS12525 PF00293 NUDIX domain AM348_RS12530 PF03606 C4-dicarboxylate anaerobic carrier AM348_RS12535 PF01515 Phosphate acetyl/butaryl transferase AM348_RS12535 PF07085 DRTGG domain AM348_RS12540 PF00871 Acetokinase family AM348_RS12545 PF04217 Protein of unknown function, DUF412 AM348_RS12550 PF03887 YfbU domain AM348_RS12555 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS12560 PF02080 TrkA-C domain AM348_RS12560 PF03600 Citrate transporter AM348_RS12570 PF00155 Aminotransferase class I and II AM348_RS12575 PF03466 LysR substrate binding domain AM348_RS12575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS12580 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM348_RS12585 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM348_RS12590 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM348_RS12590 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM348_RS12600 PF10531 SLBB domain AM348_RS12600 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM348_RS12600 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM348_RS12605 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM348_RS12605 PF00384 Molybdopterin oxidoreductase AM348_RS12605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS12605 PF01568 Molydopterin dinucleotide binding domain AM348_RS12610 PF00146 NADH dehydrogenase AM348_RS12615 PF12838 4Fe-4S dicluster domain AM348_RS12620 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM348_RS12625 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM348_RS12630 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM348_RS12630 PF00361 Proton-conducting membrane transporter AM348_RS12635 PF00361 Proton-conducting membrane transporter AM348_RS12640 PF00361 Proton-conducting membrane transporter AM348_RS12645 PF01584 CheW-like domain AM348_RS12645 PF00072 Response regulator receiver domain AM348_RS12650 PF12706 Beta-lactamase superfamily domain AM348_RS12655 PF13673 Acetyltransferase (GNAT) domain AM348_RS12660 PF05957 Bacterial protein of unknown function (DUF883) AM348_RS12665 PF00425 chorismate binding enzyme AM348_RS12670 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS12670 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS12670 PF16582 Middle domain of thiamine pyrophosphate AM348_RS12675 PF12697 Alpha/beta hydrolase family AM348_RS12680 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS12685 PF13378 Enolase C-terminal domain-like AM348_RS12690 PF00501 AMP-binding enzyme AM348_RS12690 PF13193 AMP-binding enzyme C-terminal domain AM348_RS12705 PF00892 EamA-like transporter family AM348_RS12710 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase AM348_RS12715 PF01522 Polysaccharide deacetylase AM348_RS12720 PF01370 NAD dependent epimerase/dehydratase family AM348_RS12720 PF00551 Formyl transferase AM348_RS12720 PF02911 Formyl transferase, C-terminal domain AM348_RS12725 PF00535 Glycosyl transferase family 2 AM348_RS12730 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM348_RS12735 PF00293 NUDIX domain AM348_RS12740 PF07437 YfaZ precursor AM348_RS12745 PF00994 Probable molybdopterin binding domain AM348_RS12750 PF04754 Putative transposase, YhgA-like AM348_RS12755 PF02754 Cysteine-rich domain AM348_RS12755 PF13183 4Fe-4S dicluster domain AM348_RS12760 PF00890 FAD binding domain AM348_RS12765 PF01266 FAD dependent oxidoreductase AM348_RS12765 PF04324 BFD-like [2Fe-2S] binding domain AM348_RS12770 PF07690 Major Facilitator Superfamily AM348_RS12775 PF03009 Glycerophosphoryl diester phosphodiesterase family AM348_RS12780 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS12780 PF03466 LysR substrate binding domain AM348_RS12785 PF07690 Major Facilitator Superfamily AM348_RS12790 PF00111 2Fe-2S iron-sulfur cluster binding domain AM348_RS12795 PF00268 Ribonucleotide reductase, small chain AM348_RS12800 PF03477 ATP cone domain AM348_RS12800 PF02867 Ribonucleotide reductase, barrel domain AM348_RS12800 PF00317 Ribonucleotide reductase, all-alpha domain AM348_RS12810 PF00521 DNA gyrase/topoisomerase IV, subunit A AM348_RS12810 PF03989 DNA gyrase C-terminal domain, beta-propeller AM348_RS12815 PF09456 RcsC Alpha-Beta-Loop (ABL) AM348_RS12815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS12815 PF00072 Response regulator receiver domain AM348_RS12815 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS12820 PF00072 Response regulator receiver domain AM348_RS12820 PF00196 Bacterial regulatory proteins, luxR family AM348_RS12825 PF01627 Hpt domain AM348_RS12825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS12825 PF16359 RcsD-ABL domain AM348_RS12835 PF00267 Gram-negative porin AM348_RS12845 PF02424 ApbE family AM348_RS12850 PF02805 Metal binding domain of Ada AM348_RS12850 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM348_RS12850 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM348_RS12850 PF12833 Helix-turn-helix domain AM348_RS12855 PF13532 2OG-Fe(II) oxygenase superfamily AM348_RS12860 PF00005 ABC transporter AM348_RS12865 PF03448 MgtE intracellular N domain AM348_RS12865 PF00571 CBS domain AM348_RS12865 PF01769 Divalent cation transporter AM348_RS12870 PF01740 STAS domain AM348_RS12870 PF00916 Sulfate permease family AM348_RS12875 PF06039 Malate:quinone oxidoreductase (Mqo) AM348_RS12880 PF03974 Ecotin AM348_RS12885 PF12800 4Fe-4S binding domain AM348_RS12885 PF13187 4Fe-4S dicluster domain AM348_RS12885 PF00037 4Fe-4S binding domain AM348_RS12890 PF03927 NapD protein AM348_RS12895 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS12895 PF01568 Molydopterin dinucleotide binding domain AM348_RS12895 PF00384 Molybdopterin oxidoreductase AM348_RS12900 PF12838 4Fe-4S dicluster domain AM348_RS12900 PF12800 4Fe-4S binding domain AM348_RS12905 PF13237 4Fe-4S dicluster domain AM348_RS12905 PF12801 4Fe-4S binding domain AM348_RS12910 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM348_RS12915 PF03264 NapC/NirT cytochrome c family, N-terminal region AM348_RS12920 PF00005 ABC transporter AM348_RS12925 PF03379 CcmB protein AM348_RS12930 PF01578 Cytochrome C assembly protein AM348_RS12935 PF04995 Heme exporter protein D (CcmD) AM348_RS12940 PF03100 CcmE AM348_RS12945 PF01578 Cytochrome C assembly protein AM348_RS12945 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM348_RS12950 PF08534 Redoxin AM348_RS12955 PF03918 Cytochrome C biogenesis protein AM348_RS12960 PF00196 Bacterial regulatory proteins, luxR family AM348_RS12960 PF00072 Response regulator receiver domain AM348_RS12970 PF11893 Domain of unknown function (DUF3413) AM348_RS12970 PF00884 Sulfatase AM348_RS12975 PF07208 Protein of unknown function (DUF1414) AM348_RS12980 PF04245 37-kD nucleoid-associated bacterial protein AM348_RS12990 PF01386 Ribosomal L25p family AM348_RS12995 PF04851 Type III restriction enzyme, res subunit AM348_RS12995 PF00271 Helicase conserved C-terminal domain AM348_RS13000 PF01479 S4 domain AM348_RS13000 PF00849 RNA pseudouridylate synthase AM348_RS13005 PF07690 Major Facilitator Superfamily AM348_RS13015 PF13989 YejG-like protein AM348_RS13020 PF00005 ABC transporter AM348_RS13020 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS13025 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS13025 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS13030 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS13035 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS13040 PF12792 CSS motif domain associated with EAL AM348_RS13040 PF00563 EAL domain AM348_RS13045 PF00877 NlpC/P60 family AM348_RS13055 PF01569 PAP2 superfamily AM348_RS13060 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM348_RS13060 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM348_RS13065 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS13065 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS13070 PF03786 D-mannonate dehydratase (UxuA) AM348_RS13075 PF00392 Bacterial regulatory proteins, gntR family AM348_RS13075 PF00155 Aminotransferase class I and II AM348_RS13080 PF03264 NapC/NirT cytochrome c family, N-terminal region AM348_RS13085 PF18364 Molybdopterin oxidoreductase N-terminal domain AM348_RS13085 PF00384 Molybdopterin oxidoreductase AM348_RS13085 PF01568 Molydopterin dinucleotide binding domain AM348_RS13090 PF02613 Nitrate reductase delta subunit AM348_RS13100 PF09285 Elongation factor P, C-terminal AM348_RS13100 PF08207 Elongation factor P (EF-P) KOW-like domain AM348_RS13100 PF01132 Elongation factor P (EF-P) OB domain AM348_RS13105 PF03692 Putative zinc- or iron-chelating domain AM348_RS13110 PF07690 Major Facilitator Superfamily AM348_RS13115 PF00381 PTS HPr component phosphorylation site AM348_RS13115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM348_RS13120 PF00294 pfkB family carbohydrate kinase AM348_RS13125 PF02378 Phosphotransferase system, EIIC AM348_RS13125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS13130 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM348_RS13135 PF01177 Asp/Glu/Hydantoin racemase AM348_RS13145 PF03466 LysR substrate binding domain AM348_RS13145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS13150 PF01261 Xylose isomerase-like TIM barrel AM348_RS13155 PF03601 Conserved hypothetical protein 698 AM348_RS13165 PF03466 LysR substrate binding domain AM348_RS13165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS13175 PF00324 Amino acid permease AM348_RS13180 PF00593 TonB dependent receptor AM348_RS13180 PF07715 TonB-dependent Receptor Plug Domain AM348_RS13185 PF00756 Putative esterase AM348_RS13195 PF01227 GTP cyclohydrolase I AM348_RS13200 PF04235 Protein of unknown function (DUF418) AM348_RS13205 PF00356 Bacterial regulatory proteins, lacI family AM348_RS13210 PF13407 Periplasmic binding protein domain AM348_RS13215 PF00005 ABC transporter AM348_RS13220 PF02653 Branched-chain amino acid transport system / permease component AM348_RS13230 PF02698 DUF218 domain AM348_RS13235 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM348_RS13235 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM348_RS13240 PF04172 LrgB-like family AM348_RS13245 PF03788 LrgA family AM348_RS13250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS13250 PF03466 LysR substrate binding domain AM348_RS13255 PF07690 Major Facilitator Superfamily AM348_RS13260 PF07883 Cupin domain AM348_RS13265 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM348_RS13270 PF14497 Glutathione S-transferase, C-terminal domain AM348_RS13270 PF02798 Glutathione S-transferase, N-terminal domain AM348_RS13275 PF01494 FAD binding domain AM348_RS13280 PF01207 Dihydrouridine synthase (Dus) AM348_RS13285 PF08241 Methyltransferase domain AM348_RS13290 PF02321 Outer membrane efflux protein AM348_RS13295 PF09335 SNARE associated Golgi protein AM348_RS13300 PF04893 Yip1 domain AM348_RS13310 PF00768 D-alanyl-D-alanine carboxypeptidase AM348_RS13315 PF01565 FAD binding domain AM348_RS13315 PF09330 D-lactate dehydrogenase, membrane binding AM348_RS13320 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM348_RS13320 PF14310 Fibronectin type III-like domain AM348_RS13320 PF00933 Glycosyl hydrolase family 3 N terminal domain AM348_RS13325 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM348_RS13330 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS13335 PF00005 ABC transporter AM348_RS13340 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS13355 PF13411 MerR HTH family regulatory protein AM348_RS13360 PF07694 5TMR of 5TMR-LYT AM348_RS13360 PF06580 Histidine kinase AM348_RS13365 PF00072 Response regulator receiver domain AM348_RS13365 PF04397 LytTr DNA-binding domain AM348_RS13370 PF07308 Protein of unknown function (DUF1456) AM348_RS13375 PF06998 Protein of unknown function (DUF1307) AM348_RS13380 PF09334 tRNA synthetases class I (M) AM348_RS13380 PF01588 Putative tRNA binding domain AM348_RS13385 PF10609 NUBPL iron-transfer P-loop NTPase AM348_RS13400 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS13400 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS13405 PF13953 PapC C-terminal domain AM348_RS13405 PF13954 PapC N-terminal domain AM348_RS13405 PF00577 Outer membrane usher protein AM348_RS13415 PF11776 Nickel/cobalt transporter regulator AM348_RS13420 PF02110 Hydroxyethylthiazole kinase family AM348_RS13425 PF08543 Phosphomethylpyrimidine kinase AM348_RS13430 PF00392 Bacterial regulatory proteins, gntR family AM348_RS13430 PF07702 UTRA domain AM348_RS13435 PF00294 pfkB family carbohydrate kinase AM348_RS13440 PF03747 ADP-ribosylglycohydrolase AM348_RS13445 PF03825 Nucleoside H+ symporter AM348_RS13450 PF01791 DeoC/LacD family aldolase AM348_RS13455 PF00781 Diacylglycerol kinase catalytic domain AM348_RS13460 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS13465 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS13470 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS13475 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS13480 PF00005 ABC transporter AM348_RS13485 PF12883 Protein of unknown function (DUF3828) AM348_RS13490 PF00313 'Cold-shock' DNA-binding domain AM348_RS13500 PF01906 Putative heavy-metal-binding AM348_RS13505 PF01510 N-acetylmuramoyl-L-alanine amidase AM348_RS13510 PF01370 NAD dependent epimerase/dehydratase family AM348_RS13515 PF13460 NAD(P)H-binding AM348_RS13515 PF11066 Protein of unknown function (DUF2867) AM348_RS13520 PF01212 Beta-eliminating lyase AM348_RS13525 PF00205 Thiamine pyrophosphate enzyme, central domain AM348_RS13525 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS13525 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM348_RS13535 PF13454 FAD-NAD(P)-binding AM348_RS13540 PF00970 Oxidoreductase FAD-binding domain AM348_RS13540 PF00111 2Fe-2S iron-sulfur cluster binding domain AM348_RS13540 PF00175 Oxidoreductase NAD-binding domain AM348_RS13545 PF03063 Prismane/CO dehydrogenase family AM348_RS13550 PF03956 Lysine exporter LysO AM348_RS13555 PF00230 Major intrinsic protein AM348_RS13560 PF11398 Protein of unknown function (DUF2813) AM348_RS13565 PF04393 Protein of unknown function (DUF535) AM348_RS13570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS13575 PF12704 MacB-like periplasmic core domain AM348_RS13575 PF00005 ABC transporter AM348_RS13575 PF02687 FtsX-like permease family AM348_RS13580 PF00313 'Cold-shock' DNA-binding domain AM348_RS13585 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM348_RS13590 PF10431 C-terminal, D2-small domain, of ClpB protein AM348_RS13590 PF02861 Clp amino terminal domain, pathogenicity island component AM348_RS13590 PF17871 AAA lid domain AM348_RS13590 PF07724 AAA domain (Cdc48 subfamily) AM348_RS13590 PF00004 ATPase family associated with various cellular activities (AAA) AM348_RS13605 PF16325 Peptidase family U32 C-terminal domain AM348_RS13605 PF01136 Peptidase family U32 AM348_RS13610 PF07411 Domain of unknown function (DUF1508) AM348_RS13615 PF00072 Response regulator receiver domain AM348_RS13615 PF00486 Transcriptional regulatory protein, C terminal AM348_RS13620 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS13620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS13620 PF00672 HAMP domain AM348_RS13625 PF07690 Major Facilitator Superfamily AM348_RS13630 PF00873 AcrB/AcrD/AcrF family AM348_RS13635 PF00873 AcrB/AcrD/AcrF family AM348_RS13640 PF13533 Biotin-lipoyl like AM348_RS13645 PF00012 Hsp70 protein AM348_RS13650 PF00730 HhH-GPD superfamily base excision DNA repair protein AM348_RS13650 PF06029 AlkA N-terminal domain AM348_RS13655 PF13426 PAS domain AM348_RS13655 PF00563 EAL domain AM348_RS13655 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS13655 PF05231 MASE1 AM348_RS13655 PF08447 PAS fold AM348_RS13655 PF08448 PAS fold AM348_RS13665 PF00485 Phosphoribulokinase / Uridine kinase family AM348_RS13670 PF00692 dUTPase AM348_RS13675 PF05170 AsmA family AM348_RS13680 PF03471 Transporter associated domain AM348_RS13680 PF03741 Integral membrane protein TerC family AM348_RS13680 PF00571 CBS domain AM348_RS13685 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM348_RS13685 PF10531 SLBB domain AM348_RS13685 PF02563 Polysaccharide biosynthesis/export protein AM348_RS13690 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM348_RS13695 PF13807 G-rich domain on putative tyrosine kinase AM348_RS13695 PF13614 AAA domain AM348_RS13695 PF02706 Chain length determinant protein AM348_RS13700 PF00535 Glycosyl transferase family 2 AM348_RS13705 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS13710 PF13439 Glycosyltransferase Family 4 AM348_RS13710 PF00534 Glycosyl transferases group 1 AM348_RS13720 PF00535 Glycosyl transferase family 2 AM348_RS13725 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS13730 PF16363 GDP-mannose 4,6 dehydratase AM348_RS13735 PF01370 NAD dependent epimerase/dehydratase family AM348_RS13740 PF00293 NUDIX domain AM348_RS13745 PF00534 Glycosyl transferases group 1 AM348_RS13745 PF13579 Glycosyl transferase 4-like domain AM348_RS13750 PF01050 Mannose-6-phosphate isomerase AM348_RS13750 PF00483 Nucleotidyl transferase AM348_RS13755 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM348_RS13755 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM348_RS13755 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM348_RS13755 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM348_RS13760 PF02397 Bacterial sugar transferase AM348_RS13770 PF04230 Polysaccharide pyruvyl transferase AM348_RS13775 PF13439 Glycosyltransferase Family 4 AM348_RS13775 PF00534 Glycosyl transferases group 1 AM348_RS13790 PF00483 Nucleotidyl transferase AM348_RS13795 PF16363 GDP-mannose 4,6 dehydratase AM348_RS13800 PF04321 RmlD substrate binding domain AM348_RS13805 PF00483 Nucleotidyl transferase AM348_RS13810 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase AM348_RS13820 PF00535 Glycosyl transferase family 2 AM348_RS13840 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM348_RS13840 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM348_RS13845 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM348_RS13845 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM348_RS13850 PF01370 NAD dependent epimerase/dehydratase family AM348_RS13855 PF02706 Chain length determinant protein AM348_RS13860 PF01502 Phosphoribosyl-AMP cyclohydrolase AM348_RS13860 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM348_RS13865 PF00977 Histidine biosynthesis protein AM348_RS13870 PF00977 Histidine biosynthesis protein AM348_RS13875 PF00117 Glutamine amidotransferase class-I AM348_RS13880 PF00475 Imidazoleglycerol-phosphate dehydratase AM348_RS13885 PF00155 Aminotransferase class I and II AM348_RS13890 PF00815 Histidinol dehydrogenase AM348_RS13895 PF08029 HisG, C-terminal domain AM348_RS13895 PF01634 ATP phosphoribosyltransferase AM348_RS13905 PF01370 NAD dependent epimerase/dehydratase family AM348_RS13910 PF03466 LysR substrate binding domain AM348_RS13910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS13920 PF13520 Amino acid permease AM348_RS13925 PF08411 Exonuclease C-terminal AM348_RS13925 PF00929 Exonuclease AM348_RS13930 PF01568 Molydopterin dinucleotide binding domain AM348_RS13930 PF00384 Molybdopterin oxidoreductase AM348_RS13930 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS13935 PF13247 4Fe-4S dicluster domain AM348_RS13935 PF12800 4Fe-4S binding domain AM348_RS13940 PF01292 Prokaryotic cytochrome b561 AM348_RS13945 PF00768 D-alanyl-D-alanine carboxypeptidase AM348_RS13945 PF07943 Penicillin-binding protein 5, C-terminal domain AM348_RS13950 PF06445 GyrI-like small molecule binding domain AM348_RS13955 PF04632 Fusaric acid resistance protein family AM348_RS13960 PF04363 Protein of unknown function (DUF496) AM348_RS13965 PF00288 GHMP kinases N terminal domain AM348_RS13970 PF00871 Acetokinase family AM348_RS13975 PF10662 Ethanolamine utilisation - propanediol utilisation AM348_RS13980 PF00936 BMC domain AM348_RS13990 PF10531 SLBB domain AM348_RS13990 PF13375 RnfC Barrel sandwich hybrid domain AM348_RS13990 PF13237 4Fe-4S dicluster domain AM348_RS13990 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM348_RS13995 PF00465 Iron-containing alcohol dehydrogenase AM348_RS14000 PF00171 Aldehyde dehydrogenase family AM348_RS14005 PF01923 Cobalamin adenosyltransferase AM348_RS14010 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM348_RS14020 PF06130 Phosphate propanoyltransferase AM348_RS14030 PF00936 BMC domain AM348_RS14040 PF18427 DD-reactivating factor swiveling domain AM348_RS14040 PF08841 Diol dehydratase reactivase ATPase-like domain AM348_RS14045 PF02287 Dehydratase small subunit AM348_RS14050 PF02288 Dehydratase medium subunit AM348_RS14055 PF02286 Dehydratase large subunit AM348_RS14060 PF00936 BMC domain AM348_RS14065 PF00936 BMC domain AM348_RS14070 PF00230 Major intrinsic protein AM348_RS14075 PF12833 Helix-turn-helix domain AM348_RS14075 PF10114 Sensory domain found in PocR AM348_RS14080 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM348_RS14080 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM348_RS14085 PF03186 CobD/Cbib protein AM348_RS14090 PF02570 Precorrin-8X methylmutase AM348_RS14095 PF01888 CbiD AM348_RS14100 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS14105 PF05175 Methyltransferase small domain AM348_RS14110 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS14115 PF01890 Cobalamin synthesis G C-terminus AM348_RS14115 PF11761 Cobalamin biosynthesis central region AM348_RS14115 PF11760 Cobalamin synthesis G N-terminal AM348_RS14120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS14125 PF02571 Precorrin-6x reductase CbiJ/CobK AM348_RS14130 PF06180 Cobalt chelatase (CbiK) AM348_RS14135 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS14140 PF01891 Cobalt uptake substrate-specific transmembrane region AM348_RS14145 PF02553 Cobalt transport protein component CbiN AM348_RS14150 PF02361 Cobalt transport protein AM348_RS14155 PF00005 ABC transporter AM348_RS14160 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM348_RS14165 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM348_RS14170 PF02654 Cobalamin-5-phosphate synthase AM348_RS14175 PF02277 Phosphoribosyltransferase AM348_RS14180 PF03734 L,D-transpeptidase catalytic domain AM348_RS14180 PF17969 L,D-transpeptidase C-terminal domain AM348_RS14185 PF00005 ABC transporter AM348_RS14190 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS14195 PF13416 Bacterial extracellular solute-binding protein AM348_RS14205 PF06167 Glucose-regulated metallo-peptidase M90 AM348_RS14235 PF01022 Bacterial regulatory protein, arsR family AM348_RS14240 PF06953 Arsenical resistance operon trans-acting repressor ArsD AM348_RS14245 PF02374 Anion-transporting ATPase AM348_RS14250 PF02040 Arsenical pump membrane protein AM348_RS14255 PF03960 ArsC family AM348_RS14270 PF06183 DinI-like family AM348_RS14285 PF05866 Endodeoxyribonuclease RusA AM348_RS14290 PF06147 Protein of unknown function (DUF968) AM348_RS14325 PF00563 EAL domain AM348_RS14325 PF12792 CSS motif domain associated with EAL AM348_RS14330 PF00267 Gram-negative porin AM348_RS14335 PF01966 HD domain AM348_RS14340 PF18284 DNA methylase N-terminal domain AM348_RS14340 PF00145 C-5 cytosine-specific DNA methylase AM348_RS14345 PF03852 DNA mismatch endonuclease Vsr AM348_RS14350 PF00892 EamA-like transporter family AM348_RS14355 PF05661 Protein of unknown function (DUF808) AM348_RS14360 PF09926 Uncharacterized small protein (DUF2158) AM348_RS14365 PF10733 Protein of unknown function (DUF2525) AM348_RS14370 PF10781 Dextransucrase DSRB AM348_RS14375 PF00196 Bacterial regulatory proteins, luxR family AM348_RS14380 PF01311 Bacterial export proteins, family 1 AM348_RS14385 PF01313 Bacterial export proteins, family 3 AM348_RS14390 PF00813 FliP family AM348_RS14395 PF04347 Flagellar biosynthesis protein, FliO AM348_RS14400 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM348_RS14400 PF16973 Flagellar motor switch protein FliN N-terminal AM348_RS14405 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM348_RS14405 PF02154 Flagellar motor switch protein FliM AM348_RS14410 PF03748 Flagellar basal body-associated protein FliL AM348_RS14415 PF02120 Flagellar hook-length control protein FliK AM348_RS14420 PF02050 Flagellar FliJ protein AM348_RS14425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM348_RS14425 PF18269 T3SS EscN ATPase C-terminal domain AM348_RS14430 PF02108 Flagellar assembly protein FliH AM348_RS14435 PF14841 FliG middle domain AM348_RS14435 PF14842 FliG N-terminal domain AM348_RS14435 PF01706 FliG C-terminal domain AM348_RS14440 PF08345 Flagellar M-ring protein C-terminal AM348_RS14440 PF01514 Secretory protein of YscJ/FliF family AM348_RS14445 PF02049 Flagellar hook-basal body complex protein FliE AM348_RS14450 PF01206 Sulfurtransferase TusA AM348_RS14455 PF04143 Sulphur transport AM348_RS14460 PF13987 YedD-like protein AM348_RS14465 PF00128 Alpha amylase, catalytic domain AM348_RS14465 PF02806 Alpha amylase, C-terminal all-beta domain AM348_RS14470 PF05400 Flagellar protein FliT AM348_RS14475 PF02561 Flagellar protein FliS AM348_RS14480 PF02465 Flagellar hook-associated protein 2 N-terminus AM348_RS14480 PF07195 Flagellar hook-associated protein 2 C-terminus AM348_RS14480 PF07196 Flagellin hook IN motif AM348_RS14485 PF00669 Bacterial flagellin N-terminal helical region AM348_RS14485 PF00700 Bacterial flagellin C-terminal helical region AM348_RS14485 PF08884 Flagellin D3 domain AM348_RS14495 PF04545 Sigma-70, region 4 AM348_RS14495 PF04539 Sigma-70 region 3 AM348_RS14495 PF04542 Sigma-70 region 2 AM348_RS14500 PF02899 Phage integrase, N-terminal SAM-like domain AM348_RS14505 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS14510 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS14515 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS14520 PF00005 ABC transporter AM348_RS14525 PF03472 Autoinducer binding domain AM348_RS14525 PF00196 Bacterial regulatory proteins, luxR family AM348_RS14530 PF10769 Protein of unknown function (DUF2594) AM348_RS14535 PF00196 Bacterial regulatory proteins, luxR family AM348_RS14535 PF00072 Response regulator receiver domain AM348_RS14540 PF01541 GIY-YIG catalytic domain AM348_RS14540 PF02151 UvrB/uvrC motif AM348_RS14540 PF08459 UvrC Helix-hairpin-helix N-terminal AM348_RS14545 PF01066 CDP-alcohol phosphatidyltransferase AM348_RS14665 PF06069 PerC transcriptional activator AM348_RS14680 PF05866 Endodeoxyribonuclease RusA AM348_RS14690 PF06147 Protein of unknown function (DUF968) AM348_RS14720 PF00182 Chitinase class I AM348_RS14850 PF06183 DinI-like family AM348_RS14855 PF02413 Caudovirales tail fibre assembly protein, lambda gpK AM348_RS14860 PF00717 Peptidase S24-like AM348_RS14880 PF01841 Transglutaminase-like superfamily AM348_RS14890 PF00403 Heavy-metal-associated domain AM348_RS14895 PF03695 Uncharacterised protein family (UPF0149) AM348_RS14895 PF02810 SEC-C motif AM348_RS14900 PF03222 Tryptophan/tyrosine permease family AM348_RS14905 PF10678 Protein of unknown function (DUF2492) AM348_RS14910 PF00210 Ferritin-like domain AM348_RS14915 PF13992 YecR-like lipoprotein AM348_RS14925 PF07690 Major Facilitator Superfamily AM348_RS14930 PF10964 Protein of unknown function (DUF2766) AM348_RS14935 PF00210 Ferritin-like domain AM348_RS14950 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM348_RS14955 PF00005 ABC transporter AM348_RS14960 PF02653 Branched-chain amino acid transport system / permease component AM348_RS14965 PF02358 Trehalose-phosphatase AM348_RS14970 PF00982 Glycosyltransferase family 20 AM348_RS14975 PF00582 Universal stress protein family AM348_RS14985 PF05247 Flagellar transcriptional activator (FlhD) AM348_RS14990 PF05280 Flagellar transcriptional activator (FlhC) AM348_RS14995 PF01618 MotA/TolQ/ExbB proton channel family AM348_RS15000 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM348_RS15000 PF00691 OmpA family AM348_RS15005 PF01627 Hpt domain AM348_RS15005 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS15005 PF02895 Signal transducing histidine kinase, homodimeric domain AM348_RS15005 PF01584 CheW-like domain AM348_RS15005 PF09078 CheY binding AM348_RS15010 PF01584 CheW-like domain AM348_RS15015 PF00375 Sodium:dicarboxylate symporter family AM348_RS15020 PF00672 HAMP domain AM348_RS15020 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS15020 PF02203 Tar ligand binding domain homologue AM348_RS15025 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS15025 PF02203 Tar ligand binding domain homologue AM348_RS15025 PF00672 HAMP domain AM348_RS15030 PF03705 CheR methyltransferase, all-alpha domain AM348_RS15030 PF01739 CheR methyltransferase, SAM binding domain AM348_RS15035 PF00072 Response regulator receiver domain AM348_RS15035 PF01339 CheB methylesterase AM348_RS15040 PF00072 Response regulator receiver domain AM348_RS15045 PF04344 Chemotaxis phosphatase, CheZ AM348_RS15050 PF01312 FlhB HrpN YscU SpaS Family AM348_RS15055 PF00771 FHIPEP family AM348_RS15060 PF06366 Flagellar protein FlhE AM348_RS15065 PF07470 Glycosyl Hydrolase Family 88 AM348_RS15070 PF00905 Penicillin binding protein transpeptidase domain AM348_RS15070 PF03717 Penicillin-binding Protein dimerisation domain AM348_RS15075 PF03485 Arginyl tRNA synthetase N terminal domain AM348_RS15075 PF05746 DALR anticodon binding domain AM348_RS15075 PF00750 tRNA synthetases class I (R) AM348_RS15080 PF06185 YecM protein AM348_RS15085 PF03932 CutC family AM348_RS15090 PF08003 Protein of unknown function (DUF1698) AM348_RS15095 PF13649 Methyltransferase domain AM348_RS15100 PF01124 MAPEG family AM348_RS15105 PF01904 Protein of unknown function DUF72 AM348_RS15110 PF00857 Isochorismatase family AM348_RS15115 PF00152 tRNA synthetases class II (D, K and N) AM348_RS15115 PF02938 GAD domain AM348_RS15115 PF01336 OB-fold nucleic acid binding domain AM348_RS15120 PF00293 NUDIX domain AM348_RS15125 PF01709 Transcriptional regulator AM348_RS15130 PF02075 Crossover junction endodeoxyribonuclease RuvC AM348_RS15135 PF01330 RuvA N terminal domain AM348_RS15135 PF07499 RuvA, C-terminal domain AM348_RS15140 PF05491 RuvB C-terminal winged helix domain AM348_RS15140 PF17864 RuvB AAA lid domain AM348_RS15140 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM348_RS15145 PF00950 ABC 3 transport family AM348_RS15150 PF00005 ABC transporter AM348_RS15155 PF01297 Zinc-uptake complex component A periplasmic AM348_RS15160 PF01476 LysM domain AM348_RS15160 PF08525 Opacity-associated protein A N-terminal motif AM348_RS15160 PF01551 Peptidase family M23 AM348_RS15165 PF03279 Bacterial lipid A biosynthesis acyltransferase AM348_RS15170 PF02887 Pyruvate kinase, alpha/beta domain AM348_RS15170 PF00224 Pyruvate kinase, barrel domain AM348_RS15175 PF01418 Helix-turn-helix domain, rpiR family AM348_RS15175 PF01380 SIS domain AM348_RS15185 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM348_RS15185 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM348_RS15190 PF00920 Dehydratase family AM348_RS15195 PF01081 KDPG and KHG aldolase AM348_RS15200 PF02222 ATP-grasp domain AM348_RS15205 PF07130 YebG protein AM348_RS15210 PF13995 YebF-like protein AM348_RS15215 PF04391 Protein of unknown function (DUF533) AM348_RS15220 PF00326 Prolyl oligopeptidase family AM348_RS15220 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM348_RS15225 PF00929 Exonuclease AM348_RS15230 PF00795 Carbon-nitrogen hydrolase AM348_RS15235 PF06440 DNA polymerase III, theta subunit AM348_RS15240 PF04234 CopC domain AM348_RS15245 PF05425 Copper resistance protein D AM348_RS15250 PF10709 Protein of unknown function (DUF2511) AM348_RS15255 PF00149 Calcineurin-like phosphoesterase AM348_RS15260 PF07358 Protein of unknown function (DUF1482) AM348_RS15265 PF07351 Protein of unknown function (DUF1480) AM348_RS15270 PF01189 16S rRNA methyltransferase RsmB/F AM348_RS15270 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM348_RS15270 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM348_RS15275 PF02470 MlaD protein AM348_RS15280 PF04403 Paraquat-inducible protein A AM348_RS15285 PF13185 GAF domain AM348_RS15290 PF17516 ProQ C-terminal domain AM348_RS15290 PF04352 ProQ/FINO family AM348_RS15295 PF11818 C-terminal domain of tail specific protease (DUF3340) AM348_RS15295 PF17804 Tail specific protease N-terminal domain AM348_RS15295 PF00595 PDZ domain AM348_RS15295 PF03572 Peptidase family S41 AM348_RS15300 PF01435 Peptidase family M48 AM348_RS15305 PF07690 Major Facilitator Superfamily AM348_RS15310 PF09339 IclR helix-turn-helix domain AM348_RS15310 PF01614 Bacterial transcriptional regulator AM348_RS15315 PF13996 YobH-like protein AM348_RS15320 PF13998 MgrB protein AM348_RS15325 PF13974 YebO-like protein AM348_RS15335 PF10736 Protein of unknown function (DUF2627) AM348_RS15340 PF00313 'Cold-shock' DNA-binding domain AM348_RS15345 PF00905 Penicillin binding protein transpeptidase domain AM348_RS15345 PF03717 Penicillin-binding Protein dimerisation domain AM348_RS15350 PF13847 Methyltransferase domain AM348_RS15355 PF02659 Putative manganese efflux pump AM348_RS15365 PF06173 Protein of unknown function (DUF986) AM348_RS15370 PF03613 PTS system mannose/fructose/sorbose family IID component AM348_RS15375 PF03609 PTS system sorbose-specific iic component AM348_RS15380 PF03830 PTS system sorbose subfamily IIB component AM348_RS15380 PF03610 PTS system fructose IIA component AM348_RS15390 PF03741 Integral membrane protein TerC family AM348_RS15390 PF03471 Transporter associated domain AM348_RS15395 PF12792 CSS motif domain associated with EAL AM348_RS15395 PF00563 EAL domain AM348_RS15400 PF03313 Serine dehydratase alpha chain AM348_RS15400 PF03315 Serine dehydratase beta chain AM348_RS15405 PF00293 NUDIX domain AM348_RS15410 PF04715 Anthranilate synthase component I, N terminal region AM348_RS15410 PF00425 chorismate binding enzyme AM348_RS15415 PF03701 Uncharacterised protein family (UPF0181) AM348_RS15420 PF01042 Endoribonuclease L-PSP AM348_RS15425 PF13307 Helicase C-terminal domain AM348_RS15425 PF04851 Type III restriction enzyme, res subunit AM348_RS15430 PF00814 Glycoprotease family AM348_RS15435 PF03843 Outer membrane lipoprotein Slp family AM348_RS15445 PF13193 AMP-binding enzyme C-terminal domain AM348_RS15445 PF00501 AMP-binding enzyme AM348_RS15450 PF01612 3'-5' exonuclease AM348_RS15450 PF00570 HRDC domain AM348_RS15455 PF00175 Oxidoreductase NAD-binding domain AM348_RS15455 PF00111 2Fe-2S iron-sulfur cluster binding domain AM348_RS15455 PF00970 Oxidoreductase FAD-binding domain AM348_RS15460 PF00848 Ring hydroxylating alpha subunit (catalytic domain) AM348_RS15460 PF00355 Rieske [2Fe-2S] domain AM348_RS15465 PF02028 BCCT, betaine/carnitine/choline family transporter AM348_RS15470 PF00180 Isocitrate/isopropylmalate dehydrogenase AM348_RS15475 PF03466 LysR substrate binding domain AM348_RS15475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS15480 PF03776 Septum formation topological specificity factor MinE AM348_RS15485 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM348_RS15490 PF03775 Septum formation inhibitor MinC, C-terminal domain AM348_RS15490 PF05209 Septum formation inhibitor MinC, N-terminal domain AM348_RS15495 PF05166 YcgL domain AM348_RS15500 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM348_RS15505 PF03692 Putative zinc- or iron-chelating domain AM348_RS15515 PF02600 Disulfide bond formation protein DsbB AM348_RS15520 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM348_RS15525 PF07840 FadR C-terminal domain AM348_RS15525 PF00392 Bacterial regulatory proteins, gntR family AM348_RS15530 PF04293 SpoVR like protein AM348_RS15535 PF01266 FAD dependent oxidoreductase AM348_RS15540 PF00842 Alanine racemase, C-terminal domain AM348_RS15540 PF01168 Alanine racemase, N-terminal domain AM348_RS15545 PF03471 Transporter associated domain AM348_RS15545 PF00999 Sodium/hydrogen exchanger family AM348_RS15545 PF02080 TrkA-C domain AM348_RS15550 PF17676 LD-carboxypeptidase C-terminal domain AM348_RS15550 PF02016 LD-carboxypeptidase N-terminal domain AM348_RS15555 PF01464 Transglycosylase SLT domain AM348_RS15560 PF07238 PilZ domain AM348_RS15560 PF07317 Flagellar regulator YcgR AM348_RS15565 PF04226 Transglycosylase associated protein AM348_RS15580 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM348_RS15580 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM348_RS15585 PF13649 Methyltransferase domain AM348_RS15590 PF00005 ABC transporter AM348_RS15595 PF01032 FecCD transport family AM348_RS15600 PF01497 Periplasmic binding protein AM348_RS15605 PF01204 Trehalase AM348_RS15610 PF03610 PTS system fructose IIA component AM348_RS15610 PF00381 PTS HPr component phosphorylation site AM348_RS15610 PF00391 PEP-utilising enzyme, mobile domain AM348_RS15610 PF05524 PEP-utilising enzyme, N-terminal AM348_RS15615 PF02734 DAK2 domain AM348_RS15620 PF02733 Dak1 domain AM348_RS15625 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM348_RS15625 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM348_RS15650 PF13411 MerR HTH family regulatory protein AM348_RS15655 PF04940 Sensors of blue-light using FAD AM348_RS15655 PF00563 EAL domain AM348_RS15660 PF10798 Biofilm development protein YmgB/AriR AM348_RS15670 PF10798 Biofilm development protein YmgB/AriR AM348_RS15680 PF01306 LacY proton/sugar symporter AM348_RS15685 PF00294 pfkB family carbohydrate kinase AM348_RS15690 PF08244 Glycosyl hydrolases family 32 C terminal AM348_RS15690 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM348_RS15695 PF00356 Bacterial regulatory proteins, lacI family AM348_RS15695 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM348_RS15700 PF06071 Protein of unknown function (DUF933) AM348_RS15700 PF01926 50S ribosome-binding GTPase AM348_RS15705 PF01195 Peptidyl-tRNA hydrolase AM348_RS15710 PF10762 Protein of unknown function (DUF2583) AM348_RS15715 PF01842 ACT domain AM348_RS15715 PF00696 Amino acid kinase family AM348_RS15720 PF00202 Aminotransferase class-III AM348_RS15725 PF00282 Pyridoxal-dependent decarboxylase conserved domain AM348_RS15730 PF00916 Sulfate permease family AM348_RS15730 PF01740 STAS domain AM348_RS15735 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM348_RS15735 PF14572 Phosphoribosyl synthetase-associated domain AM348_RS15740 PF00288 GHMP kinases N terminal domain AM348_RS15740 PF08544 GHMP kinases C terminal AM348_RS15745 PF03550 Outer membrane lipoprotein LolB AM348_RS15750 PF01488 Shikimate / quinate 5-dehydrogenase AM348_RS15750 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM348_RS15750 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM348_RS15755 PF00472 RF-1 domain AM348_RS15755 PF03462 PCRF domain AM348_RS15760 PF17827 PrmC N-terminal domain AM348_RS15760 PF13847 Methyltransferase domain AM348_RS15765 PF04247 Invasion gene expression up-regulator, SirB AM348_RS15770 PF13369 Transglutaminase-like superfamily AM348_RS15775 PF00793 DAHP synthetase I family AM348_RS15785 PF00440 Bacterial regulatory proteins, tetR family AM348_RS15795 PF01699 Sodium/calcium exchanger protein AM348_RS15800 PF06150 ChaB AM348_RS15805 PF04752 ChaC-like protein AM348_RS15815 PF02635 DsrE/DsrF-like family AM348_RS15820 PF08376 Nitrate and nitrite sensing AM348_RS15820 PF03861 ANTAR domain AM348_RS15830 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS15835 PF00005 ABC transporter AM348_RS15840 PF13806 Rieske-like [2Fe-2S] domain AM348_RS15840 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS15840 PF04324 BFD-like [2Fe-2S] binding domain AM348_RS15840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM348_RS15840 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM348_RS15840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM348_RS15845 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS15845 PF04324 BFD-like [2Fe-2S] binding domain AM348_RS15845 PF00384 Molybdopterin oxidoreductase AM348_RS15845 PF01568 Molydopterin dinucleotide binding domain AM348_RS15850 PF11924 Inverse autotransporter, beta-domain AM348_RS15855 PF00196 Bacterial regulatory proteins, luxR family AM348_RS15855 PF00072 Response regulator receiver domain AM348_RS15860 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM348_RS15860 PF07730 Histidine kinase AM348_RS15860 PF00672 HAMP domain AM348_RS15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS15870 PF07690 Major Facilitator Superfamily AM348_RS15875 PF00384 Molybdopterin oxidoreductase AM348_RS15875 PF14710 Respiratory nitrate reductase alpha N-terminal AM348_RS15875 PF01568 Molydopterin dinucleotide binding domain AM348_RS15880 PF13247 4Fe-4S dicluster domain AM348_RS15880 PF14711 Respiratory nitrate reductase beta C-terminal AM348_RS15885 PF02613 Nitrate reductase delta subunit AM348_RS15890 PF02665 Nitrate reductase gamma subunit AM348_RS15910 PF00551 Formyl transferase AM348_RS15910 PF01842 ACT domain AM348_RS15915 PF02810 SEC-C motif AM348_RS15920 PF01734 Patatin-like phospholipase AM348_RS15925 PF00072 Response regulator receiver domain AM348_RS15930 PF00483 Nucleotidyl transferase AM348_RS15935 PF00816 H-NS histone family AM348_RS15940 PF00265 Thymidine kinase AM348_RS15945 PF00171 Aldehyde dehydrogenase family AM348_RS15945 PF00465 Iron-containing alcohol dehydrogenase AM348_RS15950 PF01914 MarC family integral membrane protein AM348_RS15970 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS15980 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS15985 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS15985 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS15990 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS15990 PF00005 ABC transporter AM348_RS15995 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS15995 PF00005 ABC transporter AM348_RS16000 PF00027 Cyclic nucleotide-binding domain AM348_RS16000 PF00520 Ion transport protein AM348_RS16005 PF04269 Protein of unknown function, DUF440 AM348_RS16010 PF13091 PLD-like domain AM348_RS16010 PF13396 Phospholipase_D-nuclease N-terminal AM348_RS16035 PF12684 PDDEXK-like domain of unknown function (DUF3799) AM348_RS16035 PF06630 Enterobacterial exodeoxyribonuclease VIII AM348_RS16080 PF00717 Peptidase S24-like AM348_RS16080 PF01381 Helix-turn-helix AM348_RS16100 PF01695 IstB-like ATP binding protein AM348_RS16125 PF06440 DNA polymerase III, theta subunit AM348_RS16175 PF00959 Phage lysozyme AM348_RS16180 PF10721 Protein of unknown function (DUF2514) AM348_RS16330 PF06183 DinI-like family AM348_RS16335 PF00717 Peptidase S24-like AM348_RS16350 PF02586 SOS response associated peptidase (SRAP) AM348_RS16355 PF03795 YCII-related domain AM348_RS16360 PF03544 Gram-negative bacterial TonB protein C-terminal AM348_RS16365 PF03061 Thioesterase superfamily AM348_RS16370 PF04279 Intracellular septation protein A AM348_RS16380 PF03922 OmpW family AM348_RS16385 PF01709 Transcriptional regulator AM348_RS16395 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS16400 PF00290 Tryptophan synthase alpha chain AM348_RS16405 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS16410 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM348_RS16410 PF00218 Indole-3-glycerol phosphate synthase AM348_RS16415 PF00591 Glycosyl transferase family, a/b domain AM348_RS16415 PF00117 Glutamine amidotransferase class-I AM348_RS16415 PF02885 Glycosyl transferase family, helical bundle domain AM348_RS16420 PF04715 Anthranilate synthase component I, N terminal region AM348_RS16420 PF00425 chorismate binding enzyme AM348_RS16425 PF08255 Trp-operon Leader Peptide AM348_RS16430 PF02811 PHP domain AM348_RS16435 PF01300 Telomere recombination AM348_RS16440 PF00849 RNA pseudouridylate synthase AM348_RS16440 PF01479 S4 domain AM348_RS16445 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM348_RS16450 PF00106 short chain dehydrogenase AM348_RS16455 PF08496 Peptidase family S49 N-terminal AM348_RS16455 PF01343 Peptidase family S49 AM348_RS16460 PF10692 Protein of unknown function (DUF2498) AM348_RS16465 PF01131 DNA topoisomerase AM348_RS16465 PF01751 Toprim domain AM348_RS16465 PF08272 Topoisomerase I zinc-ribbon-like AM348_RS16465 PF01396 Topoisomerase DNA binding C4 zinc finger AM348_RS16470 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS16470 PF03466 LysR substrate binding domain AM348_RS16480 PF00330 Aconitase family (aconitate hydratase) AM348_RS16480 PF00694 Aconitase C-terminal domain AM348_RS16485 PF00925 GTP cyclohydrolase II AM348_RS16490 PF01569 PAP2 superfamily AM348_RS16495 PF06305 Lipopolysaccharide assembly protein A domain AM348_RS16500 PF18073 Rubredoxin metal binding domain AM348_RS16505 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM348_RS16510 PF01253 Translation initiation factor SUI1 AM348_RS16515 PF05433 Glycine zipper 2TM domain AM348_RS16520 PF08220 DeoR-like helix-turn-helix domain AM348_RS16520 PF00455 DeoR C terminal sensor domain AM348_RS16535 PF13426 PAS domain AM348_RS16535 PF00563 EAL domain AM348_RS16535 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS16545 PF08206 Ribonuclease B OB domain AM348_RS16545 PF17876 Cold shock domain AM348_RS16545 PF00773 RNB domain AM348_RS16545 PF00575 S1 RNA binding domain AM348_RS16565 PF00005 ABC transporter AM348_RS16570 PF00005 ABC transporter AM348_RS16570 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS16575 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS16575 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS16580 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS16585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS16595 PF13599 Pentapeptide repeats (9 copies) AM348_RS16600 PF02954 Bacterial regulatory protein, Fis family AM348_RS16600 PF00158 Sigma-54 interaction domain AM348_RS16605 PF04012 PspA/IM30 family AM348_RS16610 PF06667 Phage shock protein B AM348_RS16615 PF04024 PspC domain AM348_RS16620 PF09584 Phage shock protein PspD (Phageshock_PspD) AM348_RS16630 PF00581 Rhodanese-like domain AM348_RS16635 PF04317 YcjX-like family, DUF463 AM348_RS16640 PF05128 Domain of unknown function (DUF697) AM348_RS16645 PF00158 Sigma-54 interaction domain AM348_RS16645 PF18024 Helix-turn-helix domain AM348_RS16650 PF08534 Redoxin AM348_RS16655 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM348_RS16655 PF13378 Enolase C-terminal domain-like AM348_RS16660 PF00246 Zinc carboxypeptidase AM348_RS16665 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS16685 PF00455 DeoR C terminal sensor domain AM348_RS16685 PF08220 DeoR-like helix-turn-helix domain AM348_RS16690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM348_RS16705 PF00107 Zinc-binding dehydrogenase AM348_RS16705 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS16710 PF00924 Mechanosensitive ion channel AM348_RS16715 PF10749 Protein of unknown function (DUF2534) AM348_RS16720 PF00582 Universal stress protein family AM348_RS16725 PF13545 Crp-like helix-turn-helix domain AM348_RS16725 PF00027 Cyclic nucleotide-binding domain AM348_RS16730 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM348_RS16730 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM348_RS16735 PF01713 Smr domain AM348_RS16740 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS16740 PF08448 PAS fold AM348_RS16745 PF03707 Bacterial signalling protein N terminal repeat AM348_RS16745 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS16745 PF00563 EAL domain AM348_RS16750 PF02203 Tar ligand binding domain homologue AM348_RS16750 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS16750 PF00672 HAMP domain AM348_RS16755 PF01544 CorA-like Mg2+ transporter protein AM348_RS16760 PF03880 DbpA RNA binding domain AM348_RS16760 PF00270 DEAD/DEAH box helicase AM348_RS16760 PF00271 Helicase conserved C-terminal domain AM348_RS16765 PF01171 PP-loop family AM348_RS16775 PF06183 DinI-like family AM348_RS16780 PF00582 Universal stress protein family AM348_RS16790 PF00267 Gram-negative porin AM348_RS16795 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM348_RS16795 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM348_RS16795 PF10371 Domain of unknown function AM348_RS16795 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM348_RS16795 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM348_RS16805 PF03891 Domain of unknown function (DUF333) AM348_RS16810 PF03724 META domain AM348_RS16815 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM348_RS16815 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM348_RS16825 PF11739 Dicarboxylate transport AM348_RS16830 PF13617 YnbE-like lipoprotein AM348_RS16835 PF07027 Protein of unknown function (DUF1318) AM348_RS16845 PF02525 Flavodoxin-like fold AM348_RS16850 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM348_RS16850 PF00270 DEAD/DEAH box helicase AM348_RS16850 PF04408 Helicase associated domain (HA2) AM348_RS16850 PF00271 Helicase conserved C-terminal domain AM348_RS16850 PF11898 Domain of unknown function (DUF3418) AM348_RS16855 PF02698 DUF218 domain AM348_RS16860 PF00171 Aldehyde dehydrogenase family AM348_RS16865 PF13472 GDSL-like Lipase/Acylhydrolase family AM348_RS16865 PF07859 alpha/beta hydrolase fold AM348_RS16870 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM348_RS16870 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM348_RS16875 PF01292 Prokaryotic cytochrome b561 AM348_RS16880 PF00892 EamA-like transporter family AM348_RS16885 PF00717 Peptidase S24-like AM348_RS16890 PF13438 Domain of unknown function (DUF4113) AM348_RS16890 PF00817 impB/mucB/samB family AM348_RS16890 PF11799 impB/mucB/samB family C-terminal domain AM348_RS16890 PF11798 IMS family HHH motif AM348_RS16895 PF01389 OmpA-like transmembrane domain AM348_RS16895 PF00691 OmpA family AM348_RS16905 PF12167 Arm DNA-binding domain AM348_RS16905 PF00589 Phage integrase family AM348_RS16925 PF07102 Protein of unknown function (DUF1364) AM348_RS16975 PF02195 ParB-like nuclease domain AM348_RS16980 PF02583 Metal-sensitive transcriptional repressor AM348_RS16985 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS16985 PF00107 Zinc-binding dehydrogenase AM348_RS16995 PF02203 Tar ligand binding domain homologue AM348_RS16995 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS16995 PF00672 HAMP domain AM348_RS17000 PF03466 LysR substrate binding domain AM348_RS17000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS17005 PF01368 DHH family AM348_RS17005 PF02833 DHHA2 domain AM348_RS17010 PF07063 Domain of unknown function (DUF1338) AM348_RS17015 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM348_RS17025 PF04325 Protein of unknown function (DUF465) AM348_RS17030 PF00842 Alanine racemase, C-terminal domain AM348_RS17030 PF01168 Alanine racemase, N-terminal domain AM348_RS17035 PF13302 Acetyltransferase (GNAT) domain AM348_RS17040 PF18836 Beta solenoid repeat from YDCK AM348_RS17045 PF03595 Voltage-dependent anion channel AM348_RS17050 PF03848 Tellurite resistance protein TehB AM348_RS17055 PF11769 Protein of unknown function (DUF3313) AM348_RS17060 PF00892 EamA-like transporter family AM348_RS17070 PF03594 Benzoate membrane transport protein AM348_RS17075 PF01381 Helix-turn-helix AM348_RS17075 PF07883 Cupin domain AM348_RS17080 PF12392 Collagenase AM348_RS17080 PF01136 Peptidase family U32 AM348_RS17095 PF02322 Cytochrome bd terminal oxidase subunit II AM348_RS17100 PF01654 Cytochrome bd terminal oxidase subunit I AM348_RS17110 PF00155 Aminotransferase class I and II AM348_RS17110 PF00392 Bacterial regulatory proteins, gntR family AM348_RS17115 PF13416 Bacterial extracellular solute-binding protein AM348_RS17120 PF00005 ABC transporter AM348_RS17120 PF08402 TOBE domain AM348_RS17125 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS17130 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS17135 PF00171 Aldehyde dehydrogenase family AM348_RS17140 PF07690 Major Facilitator Superfamily AM348_RS17145 PF02311 AraC-like ligand binding domain AM348_RS17145 PF12833 Helix-turn-helix domain AM348_RS17155 PF10753 Toxin GhoT_OrtT AM348_RS17175 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS17180 PF10735 Protein of unknown function (DUF2526) AM348_RS17185 PF04657 Putative inner membrane exporter, YdcZ AM348_RS17190 PF00583 Acetyltransferase (GNAT) family AM348_RS17195 PF01381 Helix-turn-helix AM348_RS17195 PF08671 Anti-repressor SinI AM348_RS17200 PF16884 N-terminal domain of oxidoreductase AM348_RS17200 PF00107 Zinc-binding dehydrogenase AM348_RS17205 PF00593 TonB dependent receptor AM348_RS17205 PF07715 TonB-dependent Receptor Plug Domain AM348_RS17215 PF06004 Bacterial protein of unknown function (DUF903) AM348_RS17220 PF00324 Amino acid permease AM348_RS17225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS17225 PF08447 PAS fold AM348_RS17230 PF00296 Luciferase-like monooxygenase AM348_RS17235 PF01546 Peptidase family M20/M25/M40 AM348_RS17235 PF07687 Peptidase dimerisation domain AM348_RS17240 PF00296 Luciferase-like monooxygenase AM348_RS17245 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS17245 PF01464 Transglycosylase SLT domain AM348_RS17255 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS17260 PF00005 ABC transporter AM348_RS17265 PF00698 Acyl transferase domain AM348_RS17265 PF14765 Polyketide synthase dehydratase AM348_RS17265 PF08240 Alcohol dehydrogenase GroES-like domain AM348_RS17265 PF00550 Phosphopantetheine attachment site AM348_RS17265 PF16197 Ketoacyl-synthetase C-terminal extension AM348_RS17265 PF00109 Beta-ketoacyl synthase, N-terminal domain AM348_RS17265 PF02801 Beta-ketoacyl synthase, C-terminal domain AM348_RS17265 PF08659 KR domain AM348_RS17270 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS17270 PF03466 LysR substrate binding domain AM348_RS17275 PF13417 Glutathione S-transferase, N-terminal domain AM348_RS17280 PF07690 Major Facilitator Superfamily AM348_RS17285 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM348_RS17285 PF13378 Enolase C-terminal domain-like AM348_RS17290 PF00356 Bacterial regulatory proteins, lacI family AM348_RS17295 PF01361 Tautomerase enzyme AM348_RS17300 PF14864 Alkyl sulfatase C-terminal AM348_RS17300 PF00753 Metallo-beta-lactamase superfamily AM348_RS17300 PF14863 Alkyl sulfatase dimerisation AM348_RS17305 PF01613 Flavin reductase like domain AM348_RS17310 PF00797 N-acetyltransferase AM348_RS17315 PF02567 Phenazine biosynthesis-like protein AM348_RS17320 PF02665 Nitrate reductase gamma subunit AM348_RS17325 PF02613 Nitrate reductase delta subunit AM348_RS17330 PF13247 4Fe-4S dicluster domain AM348_RS17330 PF14711 Respiratory nitrate reductase beta C-terminal AM348_RS17335 PF00384 Molybdopterin oxidoreductase AM348_RS17335 PF01568 Molydopterin dinucleotide binding domain AM348_RS17335 PF14710 Respiratory nitrate reductase alpha N-terminal AM348_RS17340 PF07690 Major Facilitator Superfamily AM348_RS17350 PF07690 Major Facilitator Superfamily AM348_RS17360 PF00267 Gram-negative porin AM348_RS17370 PF00892 EamA-like transporter family AM348_RS17375 PF01568 Molydopterin dinucleotide binding domain AM348_RS17375 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS17375 PF00384 Molybdopterin oxidoreductase AM348_RS17380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS17380 PF01568 Molydopterin dinucleotide binding domain AM348_RS17380 PF00384 Molybdopterin oxidoreductase AM348_RS17385 PF13247 4Fe-4S dicluster domain AM348_RS17385 PF12800 4Fe-4S binding domain AM348_RS17385 PF09163 Formate dehydrogenase N, transmembrane AM348_RS17390 PF01292 Prokaryotic cytochrome b561 AM348_RS17395 PF00719 Inorganic pyrophosphatase AM348_RS17400 PF01381 Helix-turn-helix AM348_RS17405 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AM348_RS17410 PF12848 ABC transporter AM348_RS17410 PF00005 ABC transporter AM348_RS17415 PF00390 Malic enzyme, N-terminal domain AM348_RS17415 PF03949 Malic enzyme, NAD binding domain AM348_RS17420 PF08136 30S ribosomal protein subunit S22 family AM348_RS17425 PF02566 OsmC-like protein AM348_RS17430 PF00106 short chain dehydrogenase AM348_RS17440 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM348_RS17440 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM348_RS17445 PF02803 Thiolase, C-terminal domain AM348_RS17445 PF00108 Thiolase, N-terminal domain AM348_RS17450 PF01144 Coenzyme A transferase AM348_RS17455 PF01144 Coenzyme A transferase AM348_RS17460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS17460 PF03466 LysR substrate binding domain AM348_RS17465 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS17465 PF00005 ABC transporter AM348_RS17470 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS17470 PF00005 ABC transporter AM348_RS17475 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS17475 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS17480 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS17485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS17490 PF01427 D-ala-D-ala dipeptidase AM348_RS17500 PF06411 HdeA/HdeB family AM348_RS17505 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS17505 PF00672 HAMP domain AM348_RS17505 PF02743 Cache domain AM348_RS17525 PF02638 Glycosyl hydrolase-like 10 AM348_RS17530 PF09905 DNA-binding protein VF530 AM348_RS17540 PF00664 ABC transporter transmembrane region AM348_RS17540 PF00005 ABC transporter AM348_RS17550 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM348_RS17555 PF15977 Winged helix-turn-helix DNA binding AM348_RS17565 PF14864 Alkyl sulfatase C-terminal AM348_RS17565 PF14863 Alkyl sulfatase dimerisation AM348_RS17565 PF00753 Metallo-beta-lactamase superfamily AM348_RS17645 PF00924 Mechanosensitive ion channel AM348_RS17645 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM348_RS17645 PF12795 Mechanosensitive ion channel porin domain AM348_RS17655 PF00892 EamA-like transporter family AM348_RS17660 PF13302 Acetyltransferase (GNAT) domain AM348_RS17665 PF13649 Methyltransferase domain AM348_RS17675 PF01062 Bestrophin, RFP-TM, chloride channel AM348_RS17680 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS17680 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS17690 PF13811 Domain of unknown function (DUF4186) AM348_RS17695 PF04960 Glutaminase AM348_RS17700 PF02203 Tar ligand binding domain homologue AM348_RS17700 PF00672 HAMP domain AM348_RS17700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM348_RS17705 PF00171 Aldehyde dehydrogenase family AM348_RS17710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS17710 PF03466 LysR substrate binding domain AM348_RS17715 PF07690 Major Facilitator Superfamily AM348_RS17720 PF01914 MarC family integral membrane protein AM348_RS17725 PF01047 MarR family AM348_RS17730 PF12833 Helix-turn-helix domain AM348_RS17735 PF13999 MarB protein AM348_RS17740 PF00892 EamA-like transporter family AM348_RS17745 PF07690 Major Facilitator Superfamily AM348_RS17750 PF00005 ABC transporter AM348_RS17755 PF00005 ABC transporter AM348_RS17760 PF02653 Branched-chain amino acid transport system / permease component AM348_RS17765 PF02653 Branched-chain amino acid transport system / permease component AM348_RS17770 PF02954 Bacterial regulatory protein, Fis family AM348_RS17770 PF13188 PAS domain AM348_RS17770 PF00158 Sigma-54 interaction domain AM348_RS17785 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS17795 PF01432 Peptidase family M3 AM348_RS17800 PF00106 short chain dehydrogenase AM348_RS17805 PF07729 FCD domain AM348_RS17805 PF00392 Bacterial regulatory proteins, gntR family AM348_RS17810 PF14001 YdfZ protein AM348_RS17815 PF08125 Mannitol dehydrogenase C-terminal domain AM348_RS17815 PF01232 Mannitol dehydrogenase Rossmann domain AM348_RS17820 PF00083 Sugar (and other) transporter AM348_RS17825 PF13378 Enolase C-terminal domain-like AM348_RS17825 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM348_RS17830 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM348_RS17835 PF06932 Protein of unknown function (DUF1283) AM348_RS17840 PF13302 Acetyltransferase (GNAT) domain AM348_RS17845 PF06788 Uncharacterised protein family (UPF0257) AM348_RS17850 PF06649 Protein of unknown function (DUF1161) AM348_RS17860 PF13247 4Fe-4S dicluster domain AM348_RS17860 PF12800 4Fe-4S binding domain AM348_RS17865 PF04976 DMSO reductase anchor subunit (DmsC) AM348_RS17870 PF02613 Nitrate reductase delta subunit AM348_RS17875 PF00654 Voltage gated chloride channel AM348_RS17885 PF00480 ROK family AM348_RS17890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS17890 PF03466 LysR substrate binding domain AM348_RS17895 PF07690 Major Facilitator Superfamily AM348_RS17900 PF02517 CPBP intramembrane metalloprotease AM348_RS17905 PF16736 Single Cache-like AM348_RS17905 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS17905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS17905 PF00989 PAS fold AM348_RS17910 PF00072 Response regulator receiver domain AM348_RS17910 PF00486 Transcriptional regulatory protein, C terminal AM348_RS17915 PF00174 Oxidoreductase molybdopterin binding domain AM348_RS17920 PF01794 Ferric reductase like transmembrane component AM348_RS17925 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AM348_RS17935 PF00089 Trypsin AM348_RS17940 PF00893 Small Multidrug Resistance protein AM348_RS17945 PF00893 Small Multidrug Resistance protein AM348_RS17955 PF01594 AI-2E family transporter AM348_RS17960 PF07690 Major Facilitator Superfamily AM348_RS17965 PF00248 Aldo/keto reductase family AM348_RS17970 PF02233 NAD(P) transhydrogenase beta subunit AM348_RS17975 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM348_RS17975 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM348_RS17975 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM348_RS17980 PF07338 Protein of unknown function (DUF1471) AM348_RS17985 PF13520 Amino acid permease AM348_RS17995 PF06942 GlpM protein AM348_RS18000 PF00072 Response regulator receiver domain AM348_RS18000 PF00486 Transcriptional regulatory protein, C terminal AM348_RS18005 PF03824 High-affinity nickel-transport protein AM348_RS18010 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM348_RS18030 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS18030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS18030 PF00672 HAMP domain AM348_RS18035 PF05472 DNA replication terminus site-binding protein (Ter protein) AM348_RS18040 PF10415 Fumarase C C-terminus AM348_RS18040 PF00206 Lyase AM348_RS18045 PF05683 Fumarase C-terminus AM348_RS18045 PF05681 Fumarate hydratase (Fumerase) AM348_RS18050 PF01238 Phosphomannose isomerase type I AM348_RS18055 PF06097 Bacterial protein of unknown function (DUF945) AM348_RS18060 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM348_RS18060 PF00356 Bacterial regulatory proteins, lacI family AM348_RS18065 PF02378 Phosphotransferase system, EIIC AM348_RS18065 PF00367 phosphotransferase system, EIIB AM348_RS18070 PF00155 Aminotransferase class I and II AM348_RS18075 PF17158 Membrane-associated sensor, integral membrane domain AM348_RS18075 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS18085 PF00962 Adenosine/AMP deaminase AM348_RS18090 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM348_RS18090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS18100 PF05321 Haemolysin expression modulating protein AM348_RS18105 PF10754 Protein of unknown function (DUF2569) AM348_RS18110 PF02508 Rnf-Nqr subunit, membrane protein AM348_RS18115 PF04060 Putative Fe-S cluster AM348_RS18120 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM348_RS18120 PF12838 4Fe-4S dicluster domain AM348_RS18120 PF10531 SLBB domain AM348_RS18120 PF13375 RnfC Barrel sandwich hybrid domain AM348_RS18125 PF03116 NQR2, RnfD, RnfE family AM348_RS18130 PF04205 FMN-binding domain AM348_RS18135 PF02508 Rnf-Nqr subunit, membrane protein AM348_RS18140 PF00633 Helix-hairpin-helix motif AM348_RS18140 PF10576 Iron-sulfur binding domain of endonuclease III AM348_RS18140 PF00730 HhH-GPD superfamily base excision DNA repair protein AM348_RS18150 PF00854 POT family AM348_RS18155 PF02798 Glutathione S-transferase, N-terminal domain AM348_RS18155 PF00043 Glutathione S-transferase, C-terminal domain AM348_RS18160 PF08543 Phosphomethylpyrimidine kinase AM348_RS18165 PF01479 S4 domain AM348_RS18165 PF00579 tRNA synthetases class I (W and Y) AM348_RS18170 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM348_RS18170 PF01243 Pyridoxamine 5'-phosphate oxidase AM348_RS18175 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM348_RS18180 PF03702 Anhydro-N-acetylmuramic acid kinase AM348_RS18185 PF05433 Glycine zipper 2TM domain AM348_RS18190 PF01047 MarR family AM348_RS18195 PF07869 Protein of unknown function (DUF1656) AM348_RS18200 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS18200 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS18205 PF04632 Fusaric acid resistance protein family AM348_RS18210 PF00080 Copper/zinc superoxide dismutase (SODC) AM348_RS18215 PF00248 Aldo/keto reductase family AM348_RS18220 PF06945 Protein of unknown function (DUF1289) AM348_RS18225 PF00440 Bacterial regulatory proteins, tetR family AM348_RS18225 PF16925 Tetracyclin repressor-like, C-terminal domain AM348_RS18230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM348_RS18235 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM348_RS18240 PF00929 Exonuclease AM348_RS18245 PF00462 Glutaredoxin AM348_RS18250 PF00877 NlpC/P60 family AM348_RS18255 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM348_RS18255 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM348_RS18260 PF07690 Major Facilitator Superfamily AM348_RS18275 PF00356 Bacterial regulatory proteins, lacI family AM348_RS18280 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS18280 PF03466 LysR substrate binding domain AM348_RS18285 PF07690 Major Facilitator Superfamily AM348_RS18295 PF00677 Lumazine binding domain AM348_RS18300 PF01554 MatE AM348_RS18305 PF00849 RNA pseudouridylate synthase AM348_RS18310 PF02567 Phenazine biosynthesis-like protein AM348_RS18315 PF08803 Putative mono-oxygenase ydhR AM348_RS18320 PF01042 Endoribonuclease L-PSP AM348_RS18325 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS18340 PF13188 PAS domain AM348_RS18340 PF00563 EAL domain AM348_RS18340 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS18340 PF03707 Bacterial signalling protein N terminal repeat AM348_RS18345 PF08349 Protein of unknown function (DUF1722) AM348_RS18355 PF01594 AI-2E family transporter AM348_RS18360 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS18365 PF00579 tRNA synthetases class I (W and Y) AM348_RS18380 PF13953 PapC C-terminal domain AM348_RS18380 PF13954 PapC N-terminal domain AM348_RS18380 PF00577 Outer membrane usher protein AM348_RS18405 PF00893 Small Multidrug Resistance protein AM348_RS18415 PF00255 Glutathione peroxidase AM348_RS18445 PF02369 Bacterial Ig-like domain (group 1) AM348_RS18445 PF07979 Intimin C-type lectin domain AM348_RS18445 PF11924 Inverse autotransporter, beta-domain AM348_RS18445 PF09134 Invasin, domain 3 AM348_RS18450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS18450 PF03466 LysR substrate binding domain AM348_RS18460 PF00005 ABC transporter AM348_RS18465 PF01032 FecCD transport family AM348_RS18470 PF01497 Periplasmic binding protein AM348_RS18475 PF00202 Aminotransferase class-III AM348_RS18480 PF00392 Bacterial regulatory proteins, gntR family AM348_RS18480 PF00155 Aminotransferase class I and II AM348_RS18485 PF00034 Cytochrome c AM348_RS18485 PF13442 Cytochrome C oxidase, cbb3-type, subunit III AM348_RS18500 PF00171 Aldehyde dehydrogenase family AM348_RS18515 PF00324 Amino acid permease AM348_RS18525 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS18525 PF03466 LysR substrate binding domain AM348_RS18530 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS18535 PF00005 ABC transporter AM348_RS18540 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS18545 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS18555 PF01292 Prokaryotic cytochrome b561 AM348_RS18560 PF13247 4Fe-4S dicluster domain AM348_RS18570 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AM348_RS18570 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM348_RS18575 PF12800 4Fe-4S binding domain AM348_RS18575 PF13247 4Fe-4S dicluster domain AM348_RS18580 PF10965 Protein of unknown function (DUF2767) AM348_RS18585 PF00072 Response regulator receiver domain AM348_RS18585 PF00196 Bacterial regulatory proteins, luxR family AM348_RS18590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS18590 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS18595 PF13247 4Fe-4S dicluster domain AM348_RS18600 PF03916 Polysulphide reductase, NrfD AM348_RS18605 PF01568 Molydopterin dinucleotide binding domain AM348_RS18605 PF00384 Molybdopterin oxidoreductase AM348_RS18605 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS18610 PF03180 NLPA lipoprotein AM348_RS18615 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS18620 PF09383 NIL domain AM348_RS18620 PF00005 ABC transporter AM348_RS18630 PF02887 Pyruvate kinase, alpha/beta domain AM348_RS18630 PF00224 Pyruvate kinase, barrel domain AM348_RS18635 PF04728 Lipoprotein leucine-zipper AM348_RS18640 PF17969 L,D-transpeptidase C-terminal domain AM348_RS18640 PF03734 L,D-transpeptidase catalytic domain AM348_RS18640 PF01476 LysM domain AM348_RS18645 PF02657 Fe-S metabolism associated domain AM348_RS18650 PF00266 Aminotransferase class-V AM348_RS18655 PF01458 Uncharacterized protein family (UPF0051) AM348_RS18660 PF00005 ABC transporter AM348_RS18665 PF01458 Uncharacterized protein family (UPF0051) AM348_RS18670 PF01521 Iron-sulphur cluster biosynthesis AM348_RS18675 PF03466 LysR substrate binding domain AM348_RS18675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS18685 PF15930 Domain of unknown function AM348_RS18690 PF03061 Thioesterase superfamily AM348_RS18695 PF01565 FAD binding domain AM348_RS18695 PF13183 4Fe-4S dicluster domain AM348_RS18695 PF02913 FAD linked oxidases, C-terminal domain AM348_RS18700 PF01594 AI-2E family transporter AM348_RS18710 PF08965 Domain of unknown function (DUF1870) AM348_RS18715 PF07690 Major Facilitator Superfamily AM348_RS18720 PF07690 Major Facilitator Superfamily AM348_RS18725 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM348_RS18725 PF08501 Shikimate dehydrogenase substrate binding domain AM348_RS18730 PF01487 Type I 3-dehydroquinase AM348_RS18735 PF01144 Coenzyme A transferase AM348_RS18740 PF02770 Acyl-CoA dehydrogenase, middle domain AM348_RS18740 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM348_RS18740 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM348_RS18745 PF02311 AraC-like ligand binding domain AM348_RS18745 PF12833 Helix-turn-helix domain AM348_RS18750 PF01012 Electron transfer flavoprotein domain AM348_RS18755 PF00766 Electron transfer flavoprotein FAD-binding domain AM348_RS18755 PF01012 Electron transfer flavoprotein domain AM348_RS18760 PF01494 FAD binding domain AM348_RS18770 PF13193 AMP-binding enzyme C-terminal domain AM348_RS18770 PF00501 AMP-binding enzyme AM348_RS18775 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM348_RS18775 PF00391 PEP-utilising enzyme, mobile domain AM348_RS18775 PF02896 PEP-utilising enzyme, TIM barrel domain AM348_RS18780 PF03618 Kinase/pyrophosphorylase AM348_RS18785 PF00793 DAHP synthetase I family AM348_RS18790 PF10636 Hemin uptake protein hemP AM348_RS18795 PF00593 TonB dependent receptor AM348_RS18795 PF07715 TonB-dependent Receptor Plug Domain AM348_RS18800 PF05171 Haemin-degrading HemS.ChuX domain AM348_RS18805 PF01497 Periplasmic binding protein AM348_RS18810 PF01032 FecCD transport family AM348_RS18815 PF00005 ABC transporter AM348_RS18820 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM348_RS18825 PF00563 EAL domain AM348_RS18830 PF00877 NlpC/P60 family AM348_RS18835 PF00005 ABC transporter AM348_RS18840 PF00255 Glutathione peroxidase AM348_RS18845 PF01032 FecCD transport family AM348_RS18850 PF00216 Bacterial DNA-binding protein AM348_RS18855 PF03483 B3/4 domain AM348_RS18855 PF03484 tRNA synthetase B5 domain AM348_RS18855 PF01588 Putative tRNA binding domain AM348_RS18855 PF03147 Ferredoxin-fold anticodon binding domain AM348_RS18855 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM348_RS18860 PF01409 tRNA synthetases class II core domain (F) AM348_RS18860 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM348_RS18870 PF00453 Ribosomal protein L20 AM348_RS18875 PF01632 Ribosomal protein L35 AM348_RS18880 PF00707 Translation initiation factor IF-3, C-terminal domain AM348_RS18880 PF05198 Translation initiation factor IF-3, N-terminal domain AM348_RS18885 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM348_RS18885 PF02824 TGS domain AM348_RS18885 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM348_RS18885 PF03129 Anticodon binding domain AM348_RS18895 PF04338 Protein of unknown function, DUF481 AM348_RS18900 PF00294 pfkB family carbohydrate kinase AM348_RS18905 PF03881 Fructosamine kinase AM348_RS18910 PF14002 YniB-like protein AM348_RS18915 PF13419 Haloacid dehalogenase-like hydrolase AM348_RS18925 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM348_RS18930 PF00375 Sodium:dicarboxylate symporter family AM348_RS18935 PF10729 Cell division activator CedA AM348_RS18940 PF04794 YdjC-like protein AM348_RS18945 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM348_RS18945 PF02056 Family 4 glycosyl hydrolase AM348_RS18950 PF12833 Helix-turn-helix domain AM348_RS18950 PF07883 Cupin domain AM348_RS18955 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM348_RS18960 PF02378 Phosphotransferase system, EIIC AM348_RS18965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM348_RS18975 PF04355 SmpA / OmlA family AM348_RS18980 PF02540 NAD synthase AM348_RS18990 PF05962 HutD AM348_RS18995 PF07813 LTXXQ motif family protein AM348_RS19000 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM348_RS19005 PF04996 Succinylarginine dihydrolase AM348_RS19010 PF00171 Aldehyde dehydrogenase family AM348_RS19015 PF04958 Arginine N-succinyltransferase beta subunit AM348_RS19020 PF00202 Aminotransferase class-III AM348_RS19035 PF03372 Endonuclease/Exonuclease/phosphatase family AM348_RS19045 PF09335 SNARE associated Golgi protein AM348_RS19050 PF09335 SNARE associated Golgi protein AM348_RS19055 PF13416 Bacterial extracellular solute-binding protein AM348_RS19060 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS19065 PF00005 ABC transporter AM348_RS19070 PF00581 Rhodanese-like domain AM348_RS19075 PF01066 CDP-alcohol phosphatidyltransferase AM348_RS19080 PF02627 Carboxymuconolactone decarboxylase family AM348_RS19085 PF00293 NUDIX domain AM348_RS19090 PF07383 Protein of unknown function (DUF1496) AM348_RS19095 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM348_RS19095 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM348_RS19100 PF01751 Toprim domain AM348_RS19100 PF01131 DNA topoisomerase AM348_RS19105 PF00586 AIR synthase related protein, N-terminal domain AM348_RS19105 PF02769 AIR synthase related protein, C-terminal domain AM348_RS19115 PF00881 Nitroreductase family AM348_RS19125 PF01343 Peptidase family S49 AM348_RS19130 PF12833 Helix-turn-helix domain AM348_RS19130 PF01965 DJ-1/PfpI family AM348_RS19135 PF17763 Glutaminase/Asparaginase C-terminal domain AM348_RS19135 PF00710 Asparaginase, N-terminal AM348_RS19140 PF00857 Isochorismatase family AM348_RS19145 PF00704 Glycosyl hydrolases family 18 AM348_RS19145 PF00041 Fibronectin type III domain AM348_RS19150 PF01844 HNH endonuclease AM348_RS19155 PF07023 Protein of unknown function (DUF1315) AM348_RS19160 PF01641 SelR domain AM348_RS19165 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM348_RS19165 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM348_RS19170 PF01263 Aldose 1-epimerase AM348_RS19175 PF00248 Aldo/keto reductase family AM348_RS19190 PF06629 MltA-interacting protein MipA AM348_RS19195 PF06798 PrkA serine protein kinase C-terminal domain AM348_RS19195 PF08298 PrkA AAA domain AM348_RS19200 PF04285 Protein of unknown function (DUF444) AM348_RS19205 PF13649 Methyltransferase domain AM348_RS19210 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS19210 PF17155 Gammaproteobacterial periplasmic sensor domain AM348_RS19215 PF04073 Aminoacyl-tRNA editing domain AM348_RS19220 PF04284 Protein of unknown function (DUF441) AM348_RS19225 PF02311 AraC-like ligand binding domain AM348_RS19225 PF12833 Helix-turn-helix domain AM348_RS19230 PF07690 Major Facilitator Superfamily AM348_RS19235 PF06418 CTP synthase N-terminus AM348_RS19235 PF00117 Glutamine amidotransferase class-I AM348_RS19240 PF04343 Protein of unknown function, DUF488 AM348_RS19245 PF03891 Domain of unknown function (DUF333) AM348_RS19250 PF13185 GAF domain AM348_RS19250 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS19265 PF04226 Transglycosylase associated protein AM348_RS19270 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS19270 PF00384 Molybdopterin oxidoreductase AM348_RS19270 PF01568 Molydopterin dinucleotide binding domain AM348_RS19280 PF08956 Domain of unknown function (DUF1869) AM348_RS19285 PF09313 Domain of unknown function (DUF1971) AM348_RS19290 PF01810 LysE type translocator AM348_RS19295 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM348_RS19305 PF00005 ABC transporter AM348_RS19310 PF00005 ABC transporter AM348_RS19315 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS19315 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS19320 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS19325 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS19330 PF07715 TonB-dependent Receptor Plug Domain AM348_RS19330 PF00593 TonB dependent receptor AM348_RS19340 PF00563 EAL domain AM348_RS19340 PF12792 CSS motif domain associated with EAL AM348_RS19365 PF00180 Isocitrate/isopropylmalate dehydrogenase AM348_RS19370 PF00849 RNA pseudouridylate synthase AM348_RS19380 PF00293 NUDIX domain AM348_RS19390 PF04356 Protein of unknown function (DUF489) AM348_RS19395 PF08328 Adenylosuccinate lyase C-terminal AM348_RS19395 PF00206 Lyase AM348_RS19400 PF00486 Transcriptional regulatory protein, C terminal AM348_RS19400 PF00072 Response regulator receiver domain AM348_RS19405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS19405 PF08918 PhoQ Sensor AM348_RS19410 PF08007 Cupin superfamily protein AM348_RS19415 PF01546 Peptidase family M20/M25/M40 AM348_RS19415 PF07687 Peptidase dimerisation domain AM348_RS19420 PF00005 ABC transporter AM348_RS19420 PF08402 TOBE domain AM348_RS19425 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS19430 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS19435 PF13416 Bacterial extracellular solute-binding protein AM348_RS19445 PF02146 Sir2 family AM348_RS19450 PF00480 ROK family AM348_RS19455 PF02687 FtsX-like permease family AM348_RS19455 PF12704 MacB-like periplasmic core domain AM348_RS19460 PF00005 ABC transporter AM348_RS19465 PF12704 MacB-like periplasmic core domain AM348_RS19465 PF02687 FtsX-like permease family AM348_RS19475 PF01757 Acyltransferase family AM348_RS19480 PF17757 UvrB interaction domain AM348_RS19480 PF00271 Helicase conserved C-terminal domain AM348_RS19480 PF03461 TRCF domain AM348_RS19480 PF02559 CarD-like/TRCF domain AM348_RS19480 PF00270 DEAD/DEAH box helicase AM348_RS19485 PF01476 LysM domain AM348_RS19485 PF03734 L,D-transpeptidase catalytic domain AM348_RS19485 PF17969 L,D-transpeptidase C-terminal domain AM348_RS19490 PF07338 Protein of unknown function (DUF1471) AM348_RS19495 PF00440 Bacterial regulatory proteins, tetR family AM348_RS19500 PF00593 TonB dependent receptor AM348_RS19500 PF07715 TonB-dependent Receptor Plug Domain AM348_RS19505 PF05433 Glycine zipper 2TM domain AM348_RS19510 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS19515 PF05728 Uncharacterised protein family (UPF0227) AM348_RS19520 PF00933 Glycosyl hydrolase family 3 N terminal domain AM348_RS19525 PF01636 Phosphotransferase enzyme family AM348_RS19530 PF13036 Peptidoglycan-synthase activator LpoB AM348_RS19535 PF07233 Protein of unknown function (DUF1425) AM348_RS19540 PF01230 HIT domain AM348_RS19545 PF07715 TonB-dependent Receptor Plug Domain AM348_RS19545 PF00593 TonB dependent receptor AM348_RS19550 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS19555 PF07848 PaaX-like protein AM348_RS19555 PF08223 PaaX-like protein C-terminal domain AM348_RS19560 PF00501 AMP-binding enzyme AM348_RS19560 PF14535 AMP-binding enzyme C-terminal domain AM348_RS19565 PF00108 Thiolase, N-terminal domain AM348_RS19565 PF02803 Thiolase, C-terminal domain AM348_RS19570 PF03061 Thioesterase superfamily AM348_RS19575 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM348_RS19575 PF18321 3-hydroxybutyryl-CoA dehydrogenase reduced Rossmann-fold domain AM348_RS19575 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM348_RS19580 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS19585 PF00378 Enoyl-CoA hydratase/isomerase AM348_RS19590 PF00175 Oxidoreductase NAD-binding domain AM348_RS19590 PF00970 Oxidoreductase FAD-binding domain AM348_RS19590 PF00111 2Fe-2S iron-sulfur cluster binding domain AM348_RS19595 PF01883 Iron-sulfur cluster assembly protein AM348_RS19600 PF05138 Phenylacetic acid catabolic protein AM348_RS19605 PF06243 Phenylacetic acid degradation B AM348_RS19610 PF05138 Phenylacetic acid catabolic protein AM348_RS19615 PF01575 MaoC like domain AM348_RS19615 PF00171 Aldehyde dehydrogenase family AM348_RS19625 PF01554 MatE AM348_RS19645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS19645 PF03466 LysR substrate binding domain AM348_RS19650 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS19650 PF03466 LysR substrate binding domain AM348_RS19665 PF08281 Sigma-70, region 4 AM348_RS19665 PF04542 Sigma-70 region 2 AM348_RS19670 PF16220 Domain of unknown function (DUF4880) AM348_RS19670 PF04773 FecR protein AM348_RS19675 PF07660 Secretin and TonB N terminus short domain AM348_RS19675 PF07715 TonB-dependent Receptor Plug Domain AM348_RS19675 PF00593 TonB dependent receptor AM348_RS19680 PF01497 Periplasmic binding protein AM348_RS19685 PF01032 FecCD transport family AM348_RS19690 PF01032 FecCD transport family AM348_RS19695 PF00005 ABC transporter AM348_RS19705 PF07690 Major Facilitator Superfamily AM348_RS19720 PF00156 Phosphoribosyl transferase domain AM348_RS19725 PF12464 Maltose acetyltransferase AM348_RS19725 PF00132 Bacterial transferase hexapeptide (six repeats) AM348_RS19730 PF01933 Uncharacterised protein family UPF0052 AM348_RS19735 PF00356 Bacterial regulatory proteins, lacI family AM348_RS19740 PF07690 Major Facilitator Superfamily AM348_RS19765 PF00083 Sugar (and other) transporter AM348_RS19765 PF07690 Major Facilitator Superfamily AM348_RS19770 PF01048 Phosphorylase superfamily AM348_RS19770 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM348_RS19775 PF00557 Metallopeptidase family M24 AM348_RS19775 PF01321 Creatinase/Prolidase N-terminal domain AM348_RS19780 PF02378 Phosphotransferase system, EIIC AM348_RS19780 PF00367 phosphotransferase system, EIIB AM348_RS19785 PF01026 TatD related DNase AM348_RS19790 PF09115 DNA polymerase III, delta subunit, C terminal AM348_RS19795 PF02223 Thymidylate kinase AM348_RS19800 PF02618 YceG-like family AM348_RS19805 PF01063 Amino-transferase class IV AM348_RS19810 PF00109 Beta-ketoacyl synthase, N-terminal domain AM348_RS19810 PF02801 Beta-ketoacyl synthase, C-terminal domain AM348_RS19815 PF00550 Phosphopantetheine attachment site AM348_RS19825 PF00698 Acyl transferase domain AM348_RS19830 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM348_RS19830 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM348_RS19835 PF02504 Fatty acid synthesis protein AM348_RS19840 PF01783 Ribosomal L32p protein family AM348_RS19845 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM348_RS19850 PF02545 Maf-like protein AM348_RS19855 PF00849 RNA pseudouridylate synthase AM348_RS19855 PF01479 S4 domain AM348_RS19865 PF00575 S1 RNA binding domain AM348_RS19865 PF10150 Ribonuclease E/G family AM348_RS19865 PF12111 Polyribonucleotide phosphorylase C terminal AM348_RS19870 PF03466 LysR substrate binding domain AM348_RS19870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS19875 PF07690 Major Facilitator Superfamily AM348_RS19880 PF00669 Bacterial flagellin N-terminal helical region AM348_RS19885 PF00460 Flagella basal body rod protein AM348_RS19885 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM348_RS19890 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM348_RS19890 PF10135 Rod binding protein AM348_RS19895 PF02119 Flagellar P-ring protein AM348_RS19900 PF02107 Flagellar L-ring protein AM348_RS19905 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM348_RS19905 PF00460 Flagella basal body rod protein AM348_RS19910 PF00460 Flagella basal body rod protein AM348_RS19910 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM348_RS19915 PF07559 Flagellar basal body protein FlaE AM348_RS19915 PF00460 Flagella basal body rod protein AM348_RS19915 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM348_RS19920 PF03963 Flagellar hook capping protein - N-terminal region AM348_RS19920 PF13861 FlgD Tudor-like domain AM348_RS19920 PF13860 FlgD Ig-like domain AM348_RS19925 PF00460 Flagella basal body rod protein AM348_RS19925 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM348_RS19930 PF00460 Flagella basal body rod protein AM348_RS19935 PF13144 Chaperone for flagella basal body P-ring formation AM348_RS19940 PF04316 Anti-sigma-28 factor, FlgM AM348_RS19945 PF05130 FlgN protein AM348_RS19950 PF03023 Lipid II flippase MurJ AM348_RS19955 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM348_RS19960 PF04337 Protein of unknown function, DUF480 AM348_RS19965 PF13302 Acetyltransferase (GNAT) domain AM348_RS19970 PF07690 Major Facilitator Superfamily AM348_RS19975 PF07273 Protein of unknown function (DUF1439) AM348_RS19980 PF01979 Amidohydrolase family AM348_RS19985 PF06183 DinI-like family AM348_RS19990 PF13991 BssS protein family AM348_RS19995 PF01266 FAD dependent oxidoreductase AM348_RS20000 PF10968 Protein of unknown function (DUF2770) AM348_RS20005 PF01292 Prokaryotic cytochrome b561 AM348_RS20010 PF04264 YceI-like domain AM348_RS20015 PF00581 Rhodanese-like domain AM348_RS20015 PF12368 Rhodanase C-terminal AM348_RS20015 PF17773 UPF0176 acylphosphatase like domain AM348_RS20020 PF03279 Bacterial lipid A biosynthesis acyltransferase AM348_RS20025 PF07690 Major Facilitator Superfamily AM348_RS20030 PF17158 Membrane-associated sensor, integral membrane domain AM348_RS20030 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS20035 PF13984 MsyB protein AM348_RS20040 PF07119 Protein of unknown function (DUF1375) AM348_RS20045 PF00535 Glycosyl transferase family 2 AM348_RS20050 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM348_RS20055 PF01757 Acyltransferase family AM348_RS20060 PF13091 PLD-like domain AM348_RS20065 PF01661 Macro domain AM348_RS20075 PF10610 Thin aggregative fimbriae synthesis protein AM348_RS20080 PF07012 Curlin associated repeat AM348_RS20085 PF07012 Curlin associated repeat AM348_RS20090 PF00196 Bacterial regulatory proteins, luxR family AM348_RS20095 PF10627 Curli assembly protein CsgE AM348_RS20100 PF10614 Type VIII secretion system (T8SS), CsgF protein AM348_RS20105 PF03783 Curli production assembly/transport component CsgG AM348_RS20110 PF06496 Protein of unknown function (DUF1097) AM348_RS20115 PF02613 Nitrate reductase delta subunit AM348_RS20120 PF02811 PHP domain AM348_RS20130 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM348_RS20140 PF02562 PhoH-like protein AM348_RS20145 PF04261 Dyp-type peroxidase family AM348_RS20150 PF13473 Cupredoxin-like domain AM348_RS20150 PF09375 Imelysin AM348_RS20155 PF03239 Iron permease FTR1 family AM348_RS20160 PF00474 Sodium:solute symporter family AM348_RS20170 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM348_RS20170 PF00171 Aldehyde dehydrogenase family AM348_RS20170 PF01619 Proline dehydrogenase AM348_RS20170 PF14850 DNA-binding domain of Proline dehydrogenase AM348_RS20175 PF07007 Lysozyme inhibitor LprI AM348_RS20180 PF08362 YcdC-like protein, C-terminal region AM348_RS20180 PF00440 Bacterial regulatory proteins, tetR family AM348_RS20190 PF10685 Stress-induced bacterial acidophilic repeat motif AM348_RS20195 PF03358 NADPH-dependent FMN reductase AM348_RS20200 PF13993 YccJ-like protein AM348_RS20205 PF00328 Histidine phosphatase superfamily (branch 2) AM348_RS20220 PF00578 AhpC/TSA family AM348_RS20225 PF13462 Thioredoxin AM348_RS20225 PF06965 Na+/H+ antiporter 1 AM348_RS20240 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM348_RS20245 PF01323 DSBA-like thioredoxin domain AM348_RS20250 PF01556 DnaJ C terminal domain AM348_RS20250 PF00226 DnaJ domain AM348_RS20275 PF01048 Phosphorylase superfamily AM348_RS20290 PF01032 FecCD transport family AM348_RS20295 PF00005 ABC transporter AM348_RS20300 PF00127 Copper binding proteins, plastocyanin/azurin family AM348_RS20305 PF00355 Rieske [2Fe-2S] domain AM348_RS20305 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AM348_RS20310 PF02167 Cytochrome C1 family AM348_RS20310 PF00032 Cytochrome b(C-terminal)/b6/petD AM348_RS20310 PF00033 Cytochrome b/b6/petB AM348_RS20315 PF02167 Cytochrome C1 family AM348_RS20325 PF01555 DNA methylase AM348_RS20325 PF18273 Type III R-M EcoP15I C-terminal domain AM348_RS20330 PF04851 Type III restriction enzyme, res subunit AM348_RS20330 PF08774 VRR-NUC domain AM348_RS20340 PF00816 H-NS histone family AM348_RS20470 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS20475 PF01027 Inhibitor of apoptosis-promoting Bax1 AM348_RS20480 PF04358 DsrC like protein AM348_RS20485 PF00708 Acylphosphatase AM348_RS20490 PF10672 S-adenosylmethionine-dependent methyltransferase AM348_RS20490 PF17785 PUA-like domain AM348_RS20495 PF08755 Hemimethylated DNA-binding protein YccV like AM348_RS20500 PF13380 CoA binding domain AM348_RS20505 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM348_RS20510 PF02142 MGS-like domain AM348_RS20515 PF13361 UvrD-like helicase C-terminal domain AM348_RS20515 PF00580 UvrD/REP helicase N-terminal domain AM348_RS20515 PF12462 DNA helicase IV / RNA helicase N terminal AM348_RS20520 PF03733 Inner membrane component domain AM348_RS20525 PF12805 FUSC-like inner membrane protein yccS AM348_RS20530 PF04993 TfoX N-terminal domain AM348_RS20530 PF04994 TfoX C-terminal domain AM348_RS20535 PF03846 Cell division inhibitor SulA AM348_RS20540 PF00691 OmpA family AM348_RS20540 PF01389 OmpA-like transmembrane domain AM348_RS20545 PF06303 MatP N-terminal domain AM348_RS20545 PF17414 MatP C-terminal ribbon-helix-helix domain AM348_RS20550 PF13654 AAA domain AM348_RS20550 PF05362 Lon protease (S16) C-terminal proteolytic domain AM348_RS20555 PF07977 FabA-like domain AM348_RS20560 PF04957 Ribosome modulation factor AM348_RS20565 PF03886 ABC-type transport auxiliary lipoprotein component AM348_RS20570 PF02470 MlaD protein AM348_RS20575 PF04403 Paraquat-inducible protein A AM348_RS20580 PF00005 ABC transporter AM348_RS20580 PF12848 ABC transporter AM348_RS20580 PF16326 ABC transporter C-terminal domain AM348_RS20585 PF10672 S-adenosylmethionine-dependent methyltransferase AM348_RS20585 PF02926 THUMP domain AM348_RS20585 PF01170 Putative RNA methylase family UPF0020 AM348_RS20590 PF03476 MOSC N-terminal beta barrel domain AM348_RS20590 PF03473 MOSC domain AM348_RS20590 PF00111 2Fe-2S iron-sulfur cluster binding domain AM348_RS20595 PF07126 Cell-division protein ZapC AM348_RS20600 PF01180 Dihydroorotate dehydrogenase AM348_RS20610 PF03358 NADPH-dependent FMN reductase AM348_RS20615 PF09084 NMT1/THI5 like AM348_RS20620 PF00296 Luciferase-like monooxygenase AM348_RS20625 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS20630 PF00005 ABC transporter AM348_RS20635 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM348_RS20635 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM348_RS20635 PF01433 Peptidase family M1 domain AM348_RS20640 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM348_RS20640 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM348_RS20645 PF00152 tRNA synthetases class II (D, K and N) AM348_RS20645 PF01336 OB-fold nucleic acid binding domain AM348_RS20650 PF00267 Gram-negative porin AM348_RS20655 PF00155 Aminotransferase class I and II AM348_RS20660 PF00753 Metallo-beta-lactamase superfamily AM348_RS20665 PF05951 Bacterial protein of unknown function (DUF882) AM348_RS20675 PF01471 Putative peptidoglycan binding domain AM348_RS20675 PF03734 L,D-transpeptidase catalytic domain AM348_RS20685 PF16330 MukB hinge domain AM348_RS20685 PF04310 MukB N-terminal AM348_RS20690 PF04288 MukE-like family AM348_RS20695 PF17192 MukF middle domain AM348_RS20695 PF17193 MukF C-terminal domain AM348_RS20695 PF03882 MukF winged-helix domain AM348_RS20700 PF13847 Methyltransferase domain AM348_RS20705 PF02698 DUF218 domain AM348_RS20710 PF01636 Phosphotransferase enzyme family AM348_RS20715 PF02348 Cytidylyltransferase AM348_RS20720 PF03966 Trm112p-like protein AM348_RS20725 PF06224 Winged helix DNA-binding domain AM348_RS20730 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM348_RS20735 PF00005 ABC transporter AM348_RS20735 PF00664 ABC transporter transmembrane region AM348_RS20740 PF00753 Metallo-beta-lactamase superfamily AM348_RS20740 PF03772 Competence protein AM348_RS20745 PF00216 Bacterial DNA-binding protein AM348_RS20750 PF00575 S1 RNA binding domain AM348_RS20755 PF02224 Cytidylate kinase AM348_RS20760 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM348_RS20765 PF00266 Aminotransferase class-V AM348_RS20770 PF04239 Protein of unknown function (DUF421) AM348_RS20775 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM348_RS20775 PF18381 YcaO cyclodehydratase C-terminal domain AM348_RS20780 PF01226 Formate/nitrite transporter AM348_RS20785 PF02901 Pyruvate formate lyase-like AM348_RS20785 PF01228 Glycine radical AM348_RS20790 PF04055 Radical SAM superfamily AM348_RS20800 PF13520 Amino acid permease AM348_RS20805 PF07690 Major Facilitator Superfamily AM348_RS20810 PF00857 Isochorismatase family AM348_RS20815 PF04976 DMSO reductase anchor subunit (DmsC) AM348_RS20820 PF13247 4Fe-4S dicluster domain AM348_RS20820 PF12800 4Fe-4S binding domain AM348_RS20825 PF00384 Molybdopterin oxidoreductase AM348_RS20825 PF01568 Molydopterin dinucleotide binding domain AM348_RS20825 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS20830 PF02403 Seryl-tRNA synthetase N-terminal domain AM348_RS20830 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM348_RS20835 PF00004 ATPase family associated with various cellular activities (AAA) AM348_RS20835 PF16193 AAA C-terminal domain AM348_RS20835 PF12002 MgsA AAA+ ATPase C terminal AM348_RS20840 PF03548 Outer membrane lipoprotein carrier protein LolA AM348_RS20845 PF09397 Ftsk gamma domain AM348_RS20845 PF17854 FtsK alpha domain AM348_RS20845 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM348_RS20845 PF01580 FtsK/SpoIIIE family AM348_RS20850 PF01037 Lrp/AsnC ligand binding domain AM348_RS20860 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS20865 PF00005 ABC transporter AM348_RS20865 PF00664 ABC transporter transmembrane region AM348_RS20870 PF00005 ABC transporter AM348_RS20870 PF00664 ABC transporter transmembrane region AM348_RS20875 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM348_RS20885 PF01176 Translation initiation factor 1A / IF-1 AM348_RS20890 PF03466 LysR substrate binding domain AM348_RS20890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS20895 PF05726 Pirin C-terminal cupin domain AM348_RS20895 PF02678 Pirin AM348_RS20900 PF00857 Isochorismatase family AM348_RS20910 PF05958 tRNA (Uracil-5-)-methyltransferase AM348_RS20915 PF10767 Protein of unknown function (DUF2593) AM348_RS20920 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS20925 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS20930 PF00005 ABC transporter AM348_RS20930 PF08402 TOBE domain AM348_RS20935 PF13416 Bacterial extracellular solute-binding protein AM348_RS20940 PF10722 Putative bacterial sensory transduction regulator AM348_RS20945 PF18030 RimK PreATP-grasp domain AM348_RS20945 PF08443 RimK-like ATP-grasp domain AM348_RS20950 PF00881 Nitroreductase family AM348_RS20955 PF07214 Protein of unknown function (DUF1418) AM348_RS20960 PF00462 Glutaredoxin AM348_RS20965 PF11045 Putative inner membrane protein of Enterobacteriaceae AM348_RS20970 PF06826 Predicted Permease Membrane Region AM348_RS20970 PF02080 TrkA-C domain AM348_RS20980 PF00440 Bacterial regulatory proteins, tetR family AM348_RS20985 PF07690 Major Facilitator Superfamily AM348_RS21000 PF07690 Major Facilitator Superfamily AM348_RS21005 PF01569 PAP2 superfamily AM348_RS21010 PF08220 DeoR-like helix-turn-helix domain AM348_RS21010 PF00455 DeoR C terminal sensor domain AM348_RS21015 PF00768 D-alanyl-D-alanine carboxypeptidase AM348_RS21015 PF07943 Penicillin-binding protein 5, C-terminal domain AM348_RS21020 PF13417 Glutathione S-transferase, N-terminal domain AM348_RS21020 PF00043 Glutathione S-transferase, C-terminal domain AM348_RS21025 PF07995 Glucose / Sorbosone dehydrogenase AM348_RS21030 PF10799 Biofilm formation protein (YliH/bssR) AM348_RS21035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS21035 PF03466 LysR substrate binding domain AM348_RS21040 PF00343 Carbohydrate phosphorylase AM348_RS21050 PF00919 Uncharacterized protein family UPF0004 AM348_RS21050 PF18693 TRAM domain AM348_RS21050 PF04055 Radical SAM superfamily AM348_RS21055 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS21055 PF12911 N-terminal TM domain of oligopeptide transport permease C AM348_RS21060 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS21065 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS21070 PF00005 ABC transporter AM348_RS21070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM348_RS21075 PF01112 Asparaginase AM348_RS21080 PF01909 Nucleotidyltransferase domain AM348_RS21080 PF13427 Domain of unknown function (DUF4111) AM348_RS21090 PF00994 Probable molybdopterin binding domain AM348_RS21090 PF03454 MoeA C-terminal region (domain IV) AM348_RS21090 PF03453 MoeA N-terminal region (domain I and II) AM348_RS21095 PF00899 ThiF family AM348_RS21100 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM348_RS21105 PF04055 Radical SAM superfamily AM348_RS21110 PF02901 Pyruvate formate lyase-like AM348_RS21110 PF01228 Glycine radical AM348_RS21120 PF07350 Protein of unknown function (DUF1479) AM348_RS21125 PF00005 ABC transporter AM348_RS21125 PF12848 ABC transporter AM348_RS21130 PF17969 L,D-transpeptidase C-terminal domain AM348_RS21130 PF03734 L,D-transpeptidase catalytic domain AM348_RS21135 PF03600 Citrate transporter AM348_RS21140 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM348_RS21140 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM348_RS21150 PF00884 Sulfatase AM348_RS21155 PF13505 Outer membrane protein beta-barrel domain AM348_RS21160 PF00892 EamA-like transporter family AM348_RS21165 PF00210 Ferritin-like domain AM348_RS21170 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS21175 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS21180 PF00005 ABC transporter AM348_RS21185 PF00924 Mechanosensitive ion channel AM348_RS21190 PF05971 RNA methyltransferase AM348_RS21195 PF07338 Protein of unknown function (DUF1471) AM348_RS21200 PF07715 TonB-dependent Receptor Plug Domain AM348_RS21200 PF00593 TonB dependent receptor AM348_RS21205 PF13640 2OG-Fe(II) oxygenase superfamily AM348_RS21205 PF18331 PKHD-type hydroxylase C-terminal domain AM348_RS21210 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM348_RS21215 PF07338 Protein of unknown function (DUF1471) AM348_RS21220 PF02615 Malate/L-lactate dehydrogenase AM348_RS21225 PF02885 Glycosyl transferase family, helical bundle domain AM348_RS21230 PF06733 DEAD_2 AM348_RS21230 PF13307 Helicase C-terminal domain AM348_RS21235 PF00939 Sodium:sulfate symporter transmembrane region AM348_RS21240 PF00206 Lyase AM348_RS21240 PF10397 Adenylosuccinate lyase C-terminus AM348_RS21245 PF07702 UTRA domain AM348_RS21245 PF00392 Bacterial regulatory proteins, gntR family AM348_RS21250 PF00271 Helicase conserved C-terminal domain AM348_RS21250 PF00270 DEAD/DEAH box helicase AM348_RS21255 PF09209 Tetracyclin repressor-like, C-terminal domain AM348_RS21255 PF00440 Bacterial regulatory proteins, tetR family AM348_RS21260 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS21265 PF00005 ABC transporter AM348_RS21280 PF11076 Putative inner membrane protein YbhQ AM348_RS21285 PF03372 Endonuclease/Exonuclease/phosphatase family AM348_RS21290 PF13091 PLD-like domain AM348_RS21295 PF03706 Lysylphosphatidylglycerol synthase TM region AM348_RS21300 PF01027 Inhibitor of apoptosis-promoting Bax1 AM348_RS21305 PF02391 MoaE protein AM348_RS21310 PF02597 ThiS family AM348_RS21315 PF01967 MoaC family AM348_RS21320 PF00994 Probable molybdopterin binding domain AM348_RS21325 PF06463 Molybdenum Cofactor Synthesis C AM348_RS21325 PF04055 Radical SAM superfamily AM348_RS21335 PF01933 Uncharacterised protein family UPF0052 AM348_RS21340 PF04851 Type III restriction enzyme, res subunit AM348_RS21340 PF17757 UvrB interaction domain AM348_RS21340 PF12344 Ultra-violet resistance protein B AM348_RS21340 PF00271 Helicase conserved C-terminal domain AM348_RS21340 PF02151 UvrB/uvrC motif AM348_RS21350 PF00005 ABC transporter AM348_RS21360 PF08241 Methyltransferase domain AM348_RS21365 PF00155 Aminotransferase class I and II AM348_RS21370 PF04055 Radical SAM superfamily AM348_RS21370 PF06968 Biotin and Thiamin Synthesis associated domain AM348_RS21375 PF00202 Aminotransferase class-III AM348_RS21380 PF01161 Phosphatidylethanolamine-binding protein AM348_RS21385 PF00221 Aromatic amino acid lyase AM348_RS21390 PF17392 Urocanase C-terminal domain AM348_RS21390 PF01175 Urocanase Rossmann-like domain AM348_RS21390 PF17391 Urocanase N-terminal domain AM348_RS21395 PF00392 Bacterial regulatory proteins, gntR family AM348_RS21395 PF07702 UTRA domain AM348_RS21400 PF00491 Arginase family AM348_RS21405 PF01979 Amidohydrolase family AM348_RS21410 PF01095 Pectinesterase AM348_RS21415 PF10282 Lactonase, 7-bladed beta-propeller AM348_RS21425 PF03459 TOBE domain AM348_RS21425 PF00005 ABC transporter AM348_RS21430 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS21445 PF10766 Multidrug efflux pump-associated protein AcrZ AM348_RS21450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS21450 PF03459 TOBE domain AM348_RS21455 PF00005 ABC transporter AM348_RS21460 PF16363 GDP-mannose 4,6 dehydratase AM348_RS21465 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM348_RS21465 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM348_RS21470 PF08544 GHMP kinases C terminal AM348_RS21470 PF00288 GHMP kinases N terminal domain AM348_RS21470 PF10509 Galactokinase galactose-binding signature AM348_RS21475 PF01263 Aldose 1-epimerase AM348_RS21480 PF00300 Histidine phosphatase superfamily (branch 1) AM348_RS21485 PF00793 DAHP synthetase I family AM348_RS21490 PF13985 YbgS-like protein AM348_RS21495 PF01545 Cation efflux family AM348_RS21500 PF04973 Nicotinamide mononucleotide transporter AM348_RS21505 PF02445 Quinolinate synthetase A protein AM348_RS21535 PF16331 TolA binding protein trimerisation AM348_RS21535 PF13174 Tetratricopeptide repeat AM348_RS21540 PF00691 OmpA family AM348_RS21545 PF07676 WD40-like Beta Propeller Repeat AM348_RS21545 PF04052 TolB amino-terminal domain AM348_RS21550 PF06519 TolA C-terminal AM348_RS21555 PF02472 Biopolymer transport protein ExbD/TolR AM348_RS21560 PF01618 MotA/TolQ/ExbB proton channel family AM348_RS21565 PF03061 Thioesterase superfamily AM348_RS21575 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM348_RS21580 PF08173 Membrane bound YbgT-like protein AM348_RS21585 PF02322 Cytochrome bd terminal oxidase subunit II AM348_RS21590 PF01654 Cytochrome bd terminal oxidase subunit I AM348_RS21595 PF02310 B12 binding domain AM348_RS21600 PF13941 MutL protein AM348_RS21605 PF06368 Methylaspartate mutase E chain (MutE) AM348_RS21610 PF07476 Methylaspartate ammonia-lyase C-terminus AM348_RS21610 PF05034 Methylaspartate ammonia-lyase N-terminus AM348_RS21625 PF00375 Sodium:dicarboxylate symporter family AM348_RS21630 PF04960 Glutaminase AM348_RS21635 PF05681 Fumarate hydratase (Fumerase) AM348_RS21635 PF05683 Fumarase C-terminus AM348_RS21640 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM348_RS21645 PF03466 LysR substrate binding domain AM348_RS21645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS21650 PF14824 Sirohaem biosynthesis protein central AM348_RS21650 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM348_RS21650 PF10414 Sirohaem synthase dimerisation region AM348_RS21655 PF10114 Sensory domain found in PocR AM348_RS21655 PF12833 Helix-turn-helix domain AM348_RS21660 PF17042 Nucleotide-binding C-terminal domain AM348_RS21660 PF07005 Sugar-binding N-terminal domain AM348_RS21665 PF00596 Class II Aldolase and Adducin N-terminal domain AM348_RS21670 PF00455 DeoR C terminal sensor domain AM348_RS21670 PF08220 DeoR-like helix-turn-helix domain AM348_RS21675 PF01261 Xylose isomerase-like TIM barrel AM348_RS21680 PF05853 beta-keto acid cleavage enzyme AM348_RS21690 PF03928 Haem-degrading AM348_RS21700 PF02629 CoA binding domain AM348_RS21700 PF00549 CoA-ligase AM348_RS21705 PF08442 ATP-grasp domain AM348_RS21705 PF00549 CoA-ligase AM348_RS21710 PF02817 e3 binding domain AM348_RS21710 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM348_RS21710 PF00364 Biotin-requiring enzyme AM348_RS21715 PF16870 2-oxoglutarate dehydrogenase C-terminal AM348_RS21715 PF00676 Dehydrogenase E1 component AM348_RS21715 PF16078 2-oxoglutarate dehydrogenase N-terminus AM348_RS21715 PF02779 Transketolase, pyrimidine binding domain AM348_RS21720 PF13085 2Fe-2S iron-sulfur cluster binding domain AM348_RS21725 PF00890 FAD binding domain AM348_RS21725 PF02910 Fumarate reductase flavoprotein C-term AM348_RS21730 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM348_RS21735 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM348_RS21745 PF00285 Citrate synthase, C-terminal domain AM348_RS21750 PF05638 Type VI secretion system effector, Hcp AM348_RS21760 PF01320 Colicin immunity protein / pyocin immunity protein AM348_RS21765 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) AM348_RS21770 PF05145 Transition state regulatory protein AbrB AM348_RS21775 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM348_RS21775 PF06827 Zinc finger found in FPG and IleRS AM348_RS21775 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM348_RS21780 PF01470 Pyroglutamyl peptidase AM348_RS21795 PF03746 LamB/YcsF family AM348_RS21800 PF02626 Carboxyltransferase domain, subdomain A and B AM348_RS21805 PF02682 Carboxyltransferase domain, subdomain C and D AM348_RS21810 PF01784 NIF3 (NGG1p interacting factor 3) AM348_RS21815 PF00854 POT family AM348_RS21820 PF04754 Putative transposase, YhgA-like AM348_RS21825 PF00875 DNA photolyase AM348_RS21825 PF03441 FAD binding domain of DNA photolyase AM348_RS21830 PF08349 Protein of unknown function (DUF1722) AM348_RS21835 PF10725 Protein of unknown function (DUF2517) AM348_RS21840 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM348_RS21845 PF03814 Potassium-transporting ATPase A subunit AM348_RS21855 PF02669 K+-transporting ATPase, c chain AM348_RS21860 PF02702 Osmosensitive K+ channel His kinase sensor domain AM348_RS21860 PF13492 GAF domain AM348_RS21860 PF13493 Domain of unknown function (DUF4118) AM348_RS21860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS21860 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS21865 PF00072 Response regulator receiver domain AM348_RS21865 PF00486 Transcriptional regulatory protein, C terminal AM348_RS21870 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM348_RS21870 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM348_RS21870 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM348_RS21870 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM348_RS21875 PF03925 SeqA protein C-terminal domain AM348_RS21875 PF17206 SeqA protein N-terminal domain AM348_RS21880 PF12697 Alpha/beta hydrolase family AM348_RS21885 PF01402 Ribbon-helix-helix protein, copG family AM348_RS21890 PF00258 Flavodoxin AM348_RS21900 PF01475 Ferric uptake regulator family AM348_RS21905 PF03466 LysR substrate binding domain AM348_RS21905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS21910 PF14537 Cytochrome c3 AM348_RS21910 PF00890 FAD binding domain AM348_RS21920 PF07690 Major Facilitator Superfamily AM348_RS21925 PF13982 YbfN-like lipoprotein AM348_RS21930 PF03573 outer membrane porin, OprD family AM348_RS21940 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM348_RS21940 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM348_RS21945 PF02378 Phosphotransferase system, EIIC AM348_RS21945 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM348_RS21945 PF00367 phosphotransferase system, EIIB AM348_RS21950 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM348_RS21955 PF01979 Amidohydrolase family AM348_RS21960 PF01047 MarR family AM348_RS21960 PF00480 ROK family AM348_RS21965 PF13344 Haloacid dehalogenase-like hydrolase AM348_RS21975 PF00733 Asparagine synthase AM348_RS21975 PF13537 Glutamine amidotransferase domain AM348_RS22015 PF01494 FAD binding domain AM348_RS22020 PF04055 Radical SAM superfamily AM348_RS22020 PF00919 Uncharacterized protein family UPF0004 AM348_RS22020 PF01938 TRAM domain AM348_RS22025 PF02562 PhoH-like protein AM348_RS22030 PF02130 Uncharacterized protein family UPF0054 AM348_RS22035 PF03471 Transporter associated domain AM348_RS22035 PF00571 CBS domain AM348_RS22040 PF00795 Carbon-nitrogen hydrolase AM348_RS22045 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM348_RS22050 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS22055 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS22060 PF00005 ABC transporter AM348_RS22065 PF01156 Inosine-uridine preferring nucleoside hydrolase AM348_RS22070 PF07295 Zinc-ribbon containing domain AM348_RS22075 PF08264 Anticodon-binding domain of tRNA AM348_RS22075 PF00133 tRNA synthetases class I (I, L, M and V) AM348_RS22075 PF13603 Leucyl-tRNA synthetase, Domain 2 AM348_RS22080 PF04390 Lipopolysaccharide-assembly AM348_RS22085 PF06144 DNA polymerase III, delta subunit AM348_RS22085 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM348_RS22090 PF01467 Cytidylyltransferase-like AM348_RS22095 PF00155 Aminotransferase class I and II AM348_RS22100 PF00300 Histidine phosphatase superfamily (branch 1) AM348_RS22110 PF02590 Predicted SPOUT methyltransferase AM348_RS22115 PF03717 Penicillin-binding Protein dimerisation domain AM348_RS22115 PF00905 Penicillin binding protein transpeptidase domain AM348_RS22120 PF01098 Cell cycle protein AM348_RS22125 PF05036 Sporulation related domain AM348_RS22125 PF03330 Lytic transglycolase AM348_RS22130 PF07943 Penicillin-binding protein 5, C-terminal domain AM348_RS22130 PF00768 D-alanyl-D-alanine carboxypeptidase AM348_RS22135 PF04359 Protein of unknown function (DUF493) AM348_RS22140 PF03099 Biotin/lipoate A/B protein ligase family AM348_RS22145 PF04055 Radical SAM superfamily AM348_RS22145 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM348_RS22150 PF02416 mttA/Hcf106 family AM348_RS22155 PF00795 Carbon-nitrogen hydrolase AM348_RS22160 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM348_RS22165 PF00313 'Cold-shock' DNA-binding domain AM348_RS22170 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM348_RS22175 PF03606 C4-dicarboxylate anaerobic carrier AM348_RS22180 PF12431 Transcriptional regulator AM348_RS22180 PF00072 Response regulator receiver domain AM348_RS22185 PF00989 PAS fold AM348_RS22185 PF17203 Single cache domain 3 AM348_RS22185 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM348_RS22185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS22190 PF08218 Citrate lyase ligase C-terminal domain AM348_RS22195 PF06857 Malonate decarboxylase delta subunit (MdcD) AM348_RS22200 PF03328 HpcH/HpaI aldolase/citrate lyase family AM348_RS22205 PF04223 Citrate lyase, alpha subunit (CitF) AM348_RS22210 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM348_RS22215 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM348_RS22220 PF00939 Sodium:sulfate symporter transmembrane region AM348_RS22225 PF00445 Ribonuclease T2 family AM348_RS22235 PF00561 alpha/beta hydrolase fold AM348_RS22240 PF14760 Rnk N-terminus AM348_RS22240 PF01272 Transcription elongation factor, GreA/GreB, C-term AM348_RS22245 PF00582 Universal stress protein family AM348_RS22255 PF13247 4Fe-4S dicluster domain AM348_RS22260 PF01568 Molydopterin dinucleotide binding domain AM348_RS22260 PF00384 Molybdopterin oxidoreductase AM348_RS22260 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS22270 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS22270 PF13192 Thioredoxin domain AM348_RS22275 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM348_RS22275 PF00578 AhpC/TSA family AM348_RS22280 PF13098 Thioredoxin-like domain AM348_RS22285 PF03466 LysR substrate binding domain AM348_RS22285 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS22290 PF11922 Domain of unknown function (DUF3440) AM348_RS22290 PF01507 Phosphoadenosine phosphosulfate reductase family AM348_RS22295 PF02195 ParB-like nuclease domain AM348_RS22300 PF00155 Aminotransferase class I and II AM348_RS22305 PF00465 Iron-containing alcohol dehydrogenase AM348_RS22315 PF04328 Selenoprotein, putative AM348_RS22320 PF13722 5TM C-terminal transporter carbon starvation CstA AM348_RS22320 PF02554 Carbon starvation protein CstA AM348_RS22325 PF12951 Passenger-associated-transport-repeat AM348_RS22325 PF03797 Autotransporter beta-domain AM348_RS22330 PF03061 Thioesterase superfamily AM348_RS22340 PF00550 Phosphopantetheine attachment site AM348_RS22340 PF00857 Isochorismatase family AM348_RS22345 PF13193 AMP-binding enzyme C-terminal domain AM348_RS22345 PF00501 AMP-binding enzyme AM348_RS22350 PF00425 chorismate binding enzyme AM348_RS22355 PF01497 Periplasmic binding protein AM348_RS22360 PF05977 Transmembrane secretion effector AM348_RS22365 PF01032 FecCD transport family AM348_RS22370 PF01032 FecCD transport family AM348_RS22375 PF00005 ABC transporter AM348_RS22380 PF02706 Chain length determinant protein AM348_RS22385 PF13193 AMP-binding enzyme C-terminal domain AM348_RS22385 PF00975 Thioesterase domain AM348_RS22385 PF00550 Phosphopantetheine attachment site AM348_RS22385 PF00668 Condensation domain AM348_RS22385 PF00501 AMP-binding enzyme AM348_RS22390 PF03621 MbtH-like protein AM348_RS22395 PF00756 Putative esterase AM348_RS22395 PF11806 Domain of unknown function (DUF3327) AM348_RS22405 PF00593 TonB dependent receptor AM348_RS22405 PF07715 TonB-dependent Receptor Plug Domain AM348_RS22410 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM348_RS22410 PF01648 4'-phosphopantetheinyl transferase superfamily AM348_RS22415 PF02779 Transketolase, pyrimidine binding domain AM348_RS22415 PF02780 Transketolase, C-terminal domain AM348_RS22420 PF00456 Transketolase, thiamine diphosphate binding domain AM348_RS22425 PF04198 Putative sugar-binding domain AM348_RS22425 PF00325 Bacterial regulatory proteins, crp family AM348_RS22430 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM348_RS22430 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM348_RS22435 PF13407 Periplasmic binding protein domain AM348_RS22445 PF00005 ABC transporter AM348_RS22450 PF02653 Branched-chain amino acid transport system / permease component AM348_RS22470 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM348_RS22475 PF06643 Protein of unknown function (DUF1158) AM348_RS22480 PF12833 Helix-turn-helix domain AM348_RS22485 PF12706 Beta-lactamase superfamily domain AM348_RS22490 PF00440 Bacterial regulatory proteins, tetR family AM348_RS22490 PF16295 Tetracyclin repressor-like, C-terminal domain AM348_RS22495 PF04237 YjbR AM348_RS22500 PF00881 Nitroreductase family AM348_RS22505 PF00924 Mechanosensitive ion channel AM348_RS22510 PF00356 Bacterial regulatory proteins, lacI family AM348_RS22525 PF03825 Nucleoside H+ symporter AM348_RS22530 PF00324 Amino acid permease AM348_RS22550 PF12951 Passenger-associated-transport-repeat AM348_RS22555 PF13188 PAS domain AM348_RS22555 PF03707 Bacterial signalling protein N terminal repeat AM348_RS22555 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS22555 PF00563 EAL domain AM348_RS22560 PF00196 Bacterial regulatory proteins, luxR family AM348_RS22560 PF00072 Response regulator receiver domain AM348_RS22570 PF04224 Protein of unknown function, DUF417 AM348_RS22575 PF07338 Protein of unknown function (DUF1471) AM348_RS22580 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM348_RS22580 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM348_RS22585 PF12852 Cupin AM348_RS22585 PF12833 Helix-turn-helix domain AM348_RS22590 PF00873 AcrB/AcrD/AcrF family AM348_RS22595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS22595 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS22600 PF11604 Copper binding periplasmic protein CusF AM348_RS22605 PF02321 Outer membrane efflux protein AM348_RS22610 PF00486 Transcriptional regulatory protein, C terminal AM348_RS22610 PF00072 Response regulator receiver domain AM348_RS22615 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS22615 PF00672 HAMP domain AM348_RS22615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS22630 PF03099 Biotin/lipoate A/B protein ligase family AM348_RS22630 PF12706 Beta-lactamase superfamily domain AM348_RS22635 PF00384 Molybdopterin oxidoreductase AM348_RS22635 PF18364 Molybdopterin oxidoreductase N-terminal domain AM348_RS22635 PF01568 Molydopterin dinucleotide binding domain AM348_RS22640 PF03264 NapC/NirT cytochrome c family, N-terminal region AM348_RS22645 PF00582 Universal stress protein family AM348_RS22650 PF02613 Nitrate reductase delta subunit AM348_RS22655 PF01568 Molydopterin dinucleotide binding domain AM348_RS22655 PF18364 Molybdopterin oxidoreductase N-terminal domain AM348_RS22655 PF00384 Molybdopterin oxidoreductase AM348_RS22660 PF03264 NapC/NirT cytochrome c family, N-terminal region AM348_RS22665 PF00072 Response regulator receiver domain AM348_RS22665 PF00486 Transcriptional regulatory protein, C terminal AM348_RS22670 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM348_RS22675 PF00072 Response regulator receiver domain AM348_RS22675 PF01627 Hpt domain AM348_RS22675 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS22675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS22675 PF00672 HAMP domain AM348_RS22690 PF00196 Bacterial regulatory proteins, luxR family AM348_RS22700 PF00072 Response regulator receiver domain AM348_RS22700 PF00196 Bacterial regulatory proteins, luxR family AM348_RS22705 PF00419 Fimbrial protein AM348_RS22710 PF00419 Fimbrial protein AM348_RS22715 PF00577 Outer membrane usher protein AM348_RS22715 PF13954 PapC N-terminal domain AM348_RS22715 PF13953 PapC C-terminal domain AM348_RS22720 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS22720 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS22730 PF00419 Fimbrial protein AM348_RS22735 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM348_RS22735 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM348_RS22745 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM348_RS22750 PF01406 tRNA synthetases class I (C) catalytic domain AM348_RS22750 PF09190 DALR domain AM348_RS22755 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM348_RS22760 PF12850 Calcineurin-like phosphoesterase superfamily domain AM348_RS22775 PF00731 AIR carboxylase AM348_RS22780 PF02222 ATP-grasp domain AM348_RS22780 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM348_RS22790 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS22795 PF09383 NIL domain AM348_RS22795 PF00005 ABC transporter AM348_RS22800 PF03180 NLPA lipoprotein AM348_RS22805 PF00267 Gram-negative porin AM348_RS22815 PF00005 ABC transporter AM348_RS22820 PF13472 GDSL-like Lipase/Acylhydrolase family AM348_RS22825 PF00106 short chain dehydrogenase AM348_RS22830 PF00085 Thioredoxin AM348_RS22835 PF03649 Uncharacterised protein family (UPF0014) AM348_RS22840 PF00005 ABC transporter AM348_RS22845 PF16200 C-terminal region of band_7 AM348_RS22845 PF01145 SPFH domain / Band 7 family AM348_RS22850 PF01957 NfeD-like C-terminal, partner-binding AM348_RS22865 PF13411 MerR HTH family regulatory protein AM348_RS22870 PF07715 TonB-dependent Receptor Plug Domain AM348_RS22875 PF01497 Periplasmic binding protein AM348_RS22880 PF04055 Radical SAM superfamily AM348_RS22885 PF06228 Haem utilisation ChuX/HutX AM348_RS22895 PF01032 FecCD transport family AM348_RS22900 PF00005 ABC transporter AM348_RS22905 PF00403 Heavy-metal-associated domain AM348_RS22910 PF01963 TraB family AM348_RS22915 PF04073 Aminoacyl-tRNA editing domain AM348_RS22925 PF00149 Calcineurin-like phosphoesterase AM348_RS22925 PF02872 5'-nucleotidase, C-terminal domain AM348_RS22930 PF07690 Major Facilitator Superfamily AM348_RS22935 PF02254 TrkA-N domain AM348_RS22935 PF00999 Sodium/hydrogen exchanger family AM348_RS22940 PF00294 pfkB family carbohydrate kinase AM348_RS22945 PF07859 alpha/beta hydrolase fold AM348_RS22950 PF00762 Ferrochelatase AM348_RS22955 PF05191 Adenylate kinase, active site lid AM348_RS22965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS22965 PF00183 Hsp90 protein AM348_RS22970 PF13662 Toprim domain AM348_RS22970 PF02132 RecR protein AM348_RS22975 PF02575 YbaB/EbfC DNA-binding family AM348_RS22980 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM348_RS22980 PF12169 DNA polymerase III subunits gamma and tau domain III AM348_RS22980 PF12170 DNA polymerase III tau subunit V interacting with alpha AM348_RS22990 PF00156 Phosphoribosyl transferase domain AM348_RS23000 PF04304 Protein of unknown function (DUF454) AM348_RS23005 PF07445 Primosomal replication protein priC AM348_RS23010 PF10689 Protein of unknown function (DUF2496) AM348_RS23020 PF12795 Mechanosensitive ion channel porin domain AM348_RS23020 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM348_RS23020 PF00924 Mechanosensitive ion channel AM348_RS23025 PF08361 MAATS-type transcriptional repressor, C-terminal region AM348_RS23025 PF00440 Bacterial regulatory proteins, tetR family AM348_RS23030 PF00529 HlyD membrane-fusion protein of T1SS AM348_RS23030 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM348_RS23035 PF00873 AcrB/AcrD/AcrF family AM348_RS23040 PF10757 Biofilm formation regulator YbaJ AM348_RS23045 PF05321 Haemolysin expression modulating protein AM348_RS23050 PF14602 Hexapeptide repeat of succinyl-transferase AM348_RS23050 PF12464 Maltose acetyltransferase AM348_RS23055 PF10777 Inner membrane protein YlaC AM348_RS23060 PF00444 Ribosomal protein L36 AM348_RS23065 PF01197 Ribosomal protein L31 AM348_RS23070 PF12792 CSS motif domain associated with EAL AM348_RS23070 PF00563 EAL domain AM348_RS23075 PF07237 Protein of unknown function (DUF1428) AM348_RS23085 PF00155 Aminotransferase class I and II AM348_RS23085 PF00392 Bacterial regulatory proteins, gntR family AM348_RS23105 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM348_RS23110 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM348_RS23120 PF00909 Ammonium Transporter Family AM348_RS23125 PF00543 Nitrogen regulatory protein P-II AM348_RS23135 PF00005 ABC transporter AM348_RS23135 PF00664 ABC transporter transmembrane region AM348_RS23140 PF00005 ABC transporter AM348_RS23140 PF00664 ABC transporter transmembrane region AM348_RS23145 PF13404 AsnC-type helix-turn-helix domain AM348_RS23145 PF01037 Lrp/AsnC ligand binding domain AM348_RS23150 PF00291 Pyridoxal-phosphate dependent enzyme AM348_RS23165 PF12793 Sugar transport-related sRNA regulator N-term AM348_RS23165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM348_RS23170 PF06508 Queuosine biosynthesis protein QueC AM348_RS23185 PF13145 PPIC-type PPIASE domain AM348_RS23190 PF00216 Bacterial DNA-binding protein AM348_RS23195 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM348_RS23195 PF05362 Lon protease (S16) C-terminal proteolytic domain AM348_RS23195 PF00004 ATPase family associated with various cellular activities (AAA) AM348_RS23200 PF10431 C-terminal, D2-small domain, of ClpB protein AM348_RS23200 PF06689 ClpX C4-type zinc finger AM348_RS23200 PF07724 AAA domain (Cdc48 subfamily) AM348_RS23205 PF00574 Clp protease AM348_RS23210 PF05698 Bacterial trigger factor protein (TF) C-terminus AM348_RS23210 PF05697 Bacterial trigger factor protein (TF) AM348_RS23210 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM348_RS23215 PF01722 BolA-like protein AM348_RS23220 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM348_RS23220 PF03923 Uncharacterized lipoprotein AM348_RS23225 PF07690 Major Facilitator Superfamily AM348_RS23230 PF06481 COX Aromatic Rich Motif AM348_RS23230 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM348_RS23235 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM348_RS23240 PF00510 Cytochrome c oxidase subunit III AM348_RS23245 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM348_RS23250 PF01040 UbiA prenyltransferase family AM348_RS23255 PF07690 Major Facilitator Superfamily AM348_RS23260 PF04461 Protein of unknown function (DUF520) AM348_RS23265 PF02558 Ketopantoate reductase PanE/ApbA AM348_RS23265 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM348_RS23270 PF01965 DJ-1/PfpI family AM348_RS23280 PF02568 Thiamine biosynthesis protein (ThiI) AM348_RS23280 PF02926 THUMP domain AM348_RS23285 PF02609 Exonuclease VII small subunit AM348_RS23290 PF00348 Polyprenyl synthetase AM348_RS23295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM348_RS23295 PF02779 Transketolase, pyrimidine binding domain AM348_RS23295 PF02780 Transketolase, C-terminal domain AM348_RS23300 PF00248 Aldo/keto reductase family AM348_RS23305 PF04608 Phosphatidylglycerophosphatase A AM348_RS23310 PF00586 AIR synthase related protein, N-terminal domain AM348_RS23310 PF02769 AIR synthase related protein, C-terminal domain AM348_RS23315 PF01029 NusB family AM348_RS23320 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM348_RS23325 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM348_RS23325 PF01872 RibD C-terminal domain AM348_RS23330 PF03477 ATP cone domain AM348_RS23335 PF11622 Protein of unknown function (DUF3251) AM348_RS23340 PF03502 Nucleoside-specific channel-forming protein, Tsx AM348_RS23355 PF07549 SecD/SecF GG Motif AM348_RS23355 PF02355 Protein export membrane protein AM348_RS23360 PF02355 Protein export membrane protein AM348_RS23360 PF13721 SecD export protein N-terminal TM region AM348_RS23360 PF07549 SecD/SecF GG Motif AM348_RS23365 PF02699 Preprotein translocase subunit AM348_RS23370 PF01702 Queuine tRNA-ribosyltransferase AM348_RS23375 PF02547 Queuosine biosynthesis protein AM348_RS23380 PF04336 Acyl carrier protein phosphodiesterase AM348_RS23385 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM348_RS23385 PF00578 AhpC/TSA family AM348_RS23390 PF07969 Amidohydrolase family AM348_RS23400 PF00857 Isochorismatase family AM348_RS23405 PF03466 LysR substrate binding domain AM348_RS23405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM348_RS23410 PF00128 Alpha amylase, catalytic domain AM348_RS23410 PF02903 Alpha amylase, N-terminal ig-like domain AM348_RS23415 PF00324 Amino acid permease AM348_RS23420 PF05525 Branched-chain amino acid transport protein AM348_RS23430 PF00989 PAS fold AM348_RS23430 PF00512 His Kinase A (phospho-acceptor) domain AM348_RS23430 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS23430 PF11808 Phosphate regulon sensor protein PhoR AM348_RS23435 PF00072 Response regulator receiver domain AM348_RS23435 PF00486 Transcriptional regulatory protein, C terminal AM348_RS23440 PF00149 Calcineurin-like phosphoesterase AM348_RS23440 PF12320 Type 5 capsule protein repressor C-terminal domain AM348_RS23445 PF13476 AAA domain AM348_RS23455 PF00577 Outer membrane usher protein AM348_RS23455 PF13953 PapC C-terminal domain AM348_RS23455 PF13954 PapC N-terminal domain AM348_RS23460 PF02753 Pili assembly chaperone PapD, C-terminal domain AM348_RS23460 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM348_RS23465 PF00419 Fimbrial protein AM348_RS23470 PF07690 Major Facilitator Superfamily AM348_RS23475 PF00480 ROK family AM348_RS23480 PF04381 Putative exonuclease, RdgC AM348_RS23485 PF06865 Pyrimidine/purine nucleoside phosphorylase AM348_RS23490 PF07302 AroM protein AM348_RS23495 PF16362 YaiA protein AM348_RS23500 PF01202 Shikimate kinase AM348_RS23505 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM348_RS23510 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM348_RS23510 PF03807 NADP oxidoreductase coenzyme F420-dependent AM348_RS23515 PF00990 Diguanylate cyclase, GGDEF domain AM348_RS23515 PF05230 MASE2 domain AM348_RS23520 PF07769 psiF repeat AM348_RS23525 PF00245 Alkaline phosphatase AM348_RS23530 PF10796 Sigma-S stabilisation anti-adaptor protein AM348_RS23535 PF07690 Major Facilitator Superfamily AM348_RS23540 PF07478 D-ala D-ala ligase C-terminus AM348_RS23540 PF01820 D-ala D-ala ligase N-terminus AM348_RS23545 PF10953 Protein of unknown function (DUF2754) AM348_RS23550 PF10954 Protein of unknown function (DUF2755) AM348_RS23555 PF07759 Protein of unknown function (DUF1615) AM348_RS23560 PF05992 SbmA/BacA-like family AM348_RS23565 PF00144 Beta-lactamase AM348_RS23570 PF15977 Winged helix-turn-helix DNA binding AM348_RS23575 PF03797 Autotransporter beta-domain AM348_RS23575 PF03212 Pertactin AM348_RS23580 PF00490 Delta-aminolevulinic acid dehydratase AM348_RS23585 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM348_RS23590 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS23595 PF00005 ABC transporter AM348_RS23600 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM348_RS23605 PF00196 Bacterial regulatory proteins, luxR family AM348_RS23605 PF00072 Response regulator receiver domain AM348_RS23610 PF05231 MASE1 AM348_RS23610 PF07730 Histidine kinase AM348_RS23610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM348_RS23615 PF07690 Major Facilitator Superfamily AM348_RS23625 PF00528 Binding-protein-dependent transport system inner membrane component AM348_RS23630 PF00005 ABC transporter AM348_RS23630 PF08402 TOBE domain AM348_RS23635 PF02574 Homocysteine S-methyltransferase