AM348_RS00020 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM348_RS00045 SM00346 helix_turn_helix isocitrate lyase regulation AM348_RS00075 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS00085 SM00354 helix_turn _helix lactose operon repressor AM348_RS00090 SM01038 Beta galactosidase small chain AM348_RS00120 SM00382 ATPases associated with a variety of cellular activities AM348_RS00135 SM00267 diguanylate cyclase AM348_RS00155 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS00215 SM00052 Putative diguanylate phosphodiesterase AM348_RS00225 SM01230 AM348_RS00225 AM348_RS00235 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS00300 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS00310 SM00354 helix_turn _helix lactose operon repressor AM348_RS00365 SM00052 Putative diguanylate phosphodiesterase AM348_RS00395 SM00419 helix_turn_helix, cAMP Regulatory protein AM348_RS00405 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AM348_RS00475 SM00052 Putative diguanylate phosphodiesterase AM348_RS00520 SM00862 Transcriptional regulatory protein, C terminal AM348_RS00535 SM00479 AM348_RS00535 AM348_RS00550 SM00849 Metallo-beta-lactamase superfamily AM348_RS00555 SM00257 Lysin motif AM348_RS00560 SM00828 Methyltransferase in polyketide synthase (PKS) enzymes. AM348_RS00620 SM00382 ATPases associated with a variety of cellular activities AM348_RS00620 SM00930 AM348_RS00620 AM348_RS00660 SM01322 AM348_RS00660 AM348_RS00675 SM00977 TilS substrate C-terminal domain AM348_RS00695 SM00481 DNA polymerase alpha chain like domain AM348_RS00725 SM00935 Outer membrane protein (OmpH-like) AM348_RS00735 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM348_RS00785 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM348_RS00805 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM348_RS00815 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM348_RS00860 SM00382 ATPases associated with a variety of cellular activities AM348_RS00895 SM00487 DEAD-like helicases superfamily AM348_RS00895 SM00490 helicase superfamily c-terminal domain AM348_RS00895 SM00847 Helicase associated domain (HA2) Add an annotation AM348_RS00995 SM00382 ATPases associated with a variety of cellular activities AM348_RS01000 SM00947 Carbonic anhydrase AM348_RS01010 SM00564 beta-propeller repeat AM348_RS01030 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS01030 SM01134 AM348_RS01030 AM348_RS01095 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS01095 SM00895 AM348_RS01095 AM348_RS01120 SM00644 AM348_RS01120 AM348_RS01145 SM01240 AM348_RS01145 AM348_RS01170 SM00957 SecA DEAD-like domain AM348_RS01170 SM00958 SecA preprotein cross-linking domain AM348_RS01185 SM00864 Tubulin/FtsZ family, GTPase domain AM348_RS01185 SM00865 Tubulin/FtsZ family, C-terminal domain AM348_RS01190 SM00842 Cell division protein FtsA AM348_RS01265 SM00354 helix_turn _helix lactose operon repressor AM348_RS01290 SM00917 LeuA allosteric (dimerisation) domain AM348_RS01295 SM01329 AM348_RS01295 AM348_RS01310 SM00354 helix_turn _helix lactose operon repressor AM348_RS01350 SM00382 ATPases associated with a variety of cellular activities AM348_RS01360 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS01375 SM01007 Class II Aldolase and Adducin N-terminal domain AM348_RS01385 SM00486 DNA polymerase type-B family AM348_RS01390 SM00487 DEAD-like helicases superfamily AM348_RS01390 SM00490 helicase superfamily c-terminal domain AM348_RS01400 SM00271 DnaJ molecular chaperone homology domain AM348_RS01425 SM00650 Ribosomal RNA adenine dimethylases AM348_RS01480 SM00893 Electron transfer flavoprotein domain AM348_RS01485 SM00893 Electron transfer flavoprotein domain AM348_RS01530 SM00851 MGS-like domain AM348_RS01530 SM01096 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM348_RS01535 SM01097 Carbamoyl-phosphate synthase small chain, CPSase domain AM348_RS01580 SM00904 Riboflavin kinase AM348_RS01615 SM00271 DnaJ molecular chaperone homology domain AM348_RS01645 SM00852 Probable molybdopterin binding domain AM348_RS01695 SM00448 cheY-homologous receiver domain AM348_RS01695 SM00862 Transcriptional regulatory protein, C terminal AM348_RS01705 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS01705 SM00387 Histidine kinase-like ATPases AM348_RS01705 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS01710 SM00448 cheY-homologous receiver domain AM348_RS01710 SM00862 Transcriptional regulatory protein, C terminal AM348_RS01720 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS01720 SM00871 Bacterial transcription activator, effector binding domain AM348_RS01725 SM00855 Phosphoglycerate mutase family AM348_RS01745 SM00382 ATPases associated with a variety of cellular activities AM348_RS01750 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS01755 SM00382 ATPases associated with a variety of cellular activities AM348_RS01790 SM00941 Pyrimidine nucleoside phosphorylase C-terminal domain AM348_RS01795 SM01133 AM348_RS01795 AM348_RS01825 SM00749 bacterial OsmY and nodulation domain AM348_RS01875 SM00267 diguanylate cyclase AM348_RS01895 SM00421 helix_turn_helix, Lux Regulon AM348_RS01900 SM00421 helix_turn_helix, Lux Regulon AM348_RS01920 SM00382 ATPases associated with a variety of cellular activities AM348_RS01940 SM00829 Enoylreductase AM348_RS01945 SM00895 AM348_RS01945 AM348_RS01960 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS01960 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS01960 SM00319 Homologues of the ligand binding domain of Tar AM348_RS01975 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM348_RS01990 SM00347 helix_turn_helix multiple antibiotic resistance protein AM348_RS02000 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS02010 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS02085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS02085 SM00895 AM348_RS02085 AM348_RS02155 SM01130 AM348_RS02155 AM348_RS02160 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS02255 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS02260 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS02325 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS02330 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS02335 SM00506 Appr-1"-p processing enzyme AM348_RS02355 SM00829 Enoylreductase AM348_RS02480 SM00831 Cation transporter/ATPase, N-terminus AM348_RS02490 SM00354 helix_turn _helix lactose operon repressor AM348_RS02500 SM00642 Alpha-amylase domain AM348_RS02590 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS02590 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS02605 SM00382 ATPases associated with a variety of cellular activities AM348_RS02670 SM01091 Transporter associated domain AM348_RS02710 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS02720 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS02720 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS02720 SM00319 Homologues of the ligand binding domain of Tar AM348_RS02780 SM01007 Class II Aldolase and Adducin N-terminal domain AM348_RS02790 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM348_RS02815 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS02815 SM01134 AM348_RS02815 AM348_RS02840 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM348_RS02845 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS02845 SM00357 Cold shock protein domain AM348_RS02845 SM00955 AM348_RS02845 AM348_RS02860 SM00788 Adenylosuccinate synthetase AM348_RS02870 SM00244 prohibitin homologues AM348_RS02875 SM00244 prohibitin homologues AM348_RS02895 SM00853 MutL C terminal dimerisation domain AM348_RS02895 SM01340 AM348_RS02895 AM348_RS02900 SM00646 AM348_RS02900 AM348_RS02935 SM00479 AM348_RS02935 AM348_RS03005 SM00421 helix_turn_helix, Lux Regulon AM348_RS03020 SM00841 Elongation factor P, C-terminal AM348_RS03020 SM01185 AM348_RS03020 AM348_RS03045 SM00883 Chaperonin 10 Kd subunit AM348_RS03130 SM00387 Histidine kinase-like ATPases AM348_RS03135 SM00448 cheY-homologous receiver domain AM348_RS03170 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS03180 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS03195 SM00448 cheY-homologous receiver domain AM348_RS03195 SM00862 Transcriptional regulatory protein, C terminal AM348_RS03200 SM00387 Histidine kinase-like ATPases AM348_RS03200 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS03245 SM00382 ATPases associated with a variety of cellular activities AM348_RS03260 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS03260 SM00866 AM348_RS03260 AM348_RS03285 SM00382 ATPases associated with a variety of cellular activities AM348_RS03290 SM00382 ATPases associated with a variety of cellular activities AM348_RS03300 SM00072 Guanylate kinase homologues. AM348_RS03315 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS03330 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS03330 SM00387 Histidine kinase-like ATPases AM348_RS03330 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS03330 SM00448 cheY-homologous receiver domain AM348_RS03340 SM00382 ATPases associated with a variety of cellular activities AM348_RS03370 SM00448 cheY-homologous receiver domain AM348_RS03370 SM00862 Transcriptional regulatory protein, C terminal AM348_RS03380 SM00671 Sel1-like repeats. AM348_RS03390 SM00028 Tetratricopeptide repeats AM348_RS03465 SM00422 helix_turn_helix, mercury resistance AM348_RS03470 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS03475 SM00052 Putative diguanylate phosphodiesterase AM348_RS03535 SM01005 Alanine racemase, C-terminal domain AM348_RS03540 SM00382 ATPases associated with a variety of cellular activities AM348_RS03545 SM00829 Enoylreductase AM348_RS03590 SM00563 Phosphate acyltransferases AM348_RS03615 SM00382 ATPases associated with a variety of cellular activities AM348_RS03700 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS03700 SM01134 AM348_RS03700 AM348_RS03710 SM00363 S4 RNA-binding domain AM348_RS03720 SM00822 AM348_RS03720 AM348_RS03800 SM01018 B12 binding domain AM348_RS03805 SM00346 helix_turn_helix isocitrate lyase regulation AM348_RS03865 SM00798 AICARFT/IMPCHase bienzyme AM348_RS03865 SM00851 MGS-like domain AM348_RS03870 SM01209 AM348_RS03870 AM348_RS03870 SM01210 AM348_RS03870 AM348_RS03875 SM00382 ATPases associated with a variety of cellular activities AM348_RS03875 SM00448 cheY-homologous receiver domain AM348_RS03880 SM00387 Histidine kinase-like ATPases AM348_RS03880 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS03895 SM00411 bacterial (prokaryotic) histone like domain AM348_RS03950 SM00876 Biotin and Thiamin Synthesis associated domain AM348_RS03955 SM00357 Cold shock protein domain AM348_RS03970 SM00663 RNA polymerase I subunit A N-terminus AM348_RS04000 SM00649 Ribosomal protein L11/L12 AM348_RS04005 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM348_RS04005 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM348_RS04130 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM348_RS04150 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS04265 SM00487 DEAD-like helicases superfamily AM348_RS04265 SM00490 helicase superfamily c-terminal domain AM348_RS04270 SM00354 helix_turn _helix lactose operon repressor AM348_RS04290 SM00382 ATPases associated with a variety of cellular activities AM348_RS04290 SM01086 C-terminal, D2-small domain, of ClpB protein AM348_RS04380 SM00448 cheY-homologous receiver domain AM348_RS04380 SM00862 Transcriptional regulatory protein, C terminal AM348_RS04385 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS04385 SM00387 Histidine kinase-like ATPases AM348_RS04385 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS04400 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS04400 SM00866 AM348_RS04400 AM348_RS04410 SM01130 AM348_RS04410 AM348_RS04430 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS04435 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS04450 SM01007 Class II Aldolase and Adducin N-terminal domain AM348_RS04465 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS04505 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS04530 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS04550 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS04590 SM00829 Enoylreductase AM348_RS04595 SM01133 AM348_RS04595 AM348_RS04610 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS04610 SM01134 AM348_RS04610 AM348_RS04625 SM01230 AM348_RS04625 AM348_RS04630 SM00091 PAS domain AM348_RS04630 SM00387 Histidine kinase-like ATPases AM348_RS04630 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS04635 SM00382 ATPases associated with a variety of cellular activities AM348_RS04635 SM00448 cheY-homologous receiver domain AM348_RS04645 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS04660 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM348_RS04660 SM00474 3'-5' exonuclease AM348_RS04660 SM00475 5'-3' exonuclease AM348_RS04660 SM00482 DNA polymerase A domain AM348_RS04665 SM00563 Phosphate acyltransferases AM348_RS04755 SM00354 helix_turn _helix lactose operon repressor AM348_RS04775 SM00738 In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold. AM348_RS04870 SM00341 Helicase and RNase D C-terminal AM348_RS04870 SM00487 DEAD-like helicases superfamily AM348_RS04870 SM00490 helicase superfamily c-terminal domain AM348_RS04870 SM00956 AM348_RS04870 AM348_RS04925 SM01219 AM348_RS04925 AM348_RS05020 SM00984 UDP binding domain AM348_RS05040 SM00357 Cold shock protein domain AM348_RS05040 SM00382 ATPases associated with a variety of cellular activities AM348_RS05040 SM00959 Rho termination factor, N-terminal domain AM348_RS05055 SM00487 DEAD-like helicases superfamily AM348_RS05055 SM00490 helicase superfamily c-terminal domain AM348_RS05125 SM00382 ATPases associated with a variety of cellular activities AM348_RS05170 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS05170 SM00895 AM348_RS05170 AM348_RS05180 SM00354 helix_turn _helix lactose operon repressor AM348_RS05200 SM00382 ATPases associated with a variety of cellular activities AM348_RS05215 SM00382 ATPases associated with a variety of cellular activities AM348_RS05220 SM00327 von Willebrand factor (vWF) type A domain AM348_RS05230 SM00344 helix_turn_helix ASNC type AM348_RS05240 SM01228 AM348_RS05240 AM348_RS05285 SM00382 ATPases associated with a variety of cellular activities AM348_RS05320 SM00382 ATPases associated with a variety of cellular activities AM348_RS05370 SM01234 AM348_RS05370 AM348_RS05390 SM00382 ATPases associated with a variety of cellular activities AM348_RS05390 SM00760 Bacterial dnaA protein helix-turn-helix domain AM348_RS05395 SM00480 DNA polymerase III beta subunit AM348_RS05405 SM00387 Histidine kinase-like ATPases AM348_RS05405 SM00433 TopoisomeraseII AM348_RS05525 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS05525 SM01134 AM348_RS05525 AM348_RS05545 SM00421 helix_turn_helix, Lux Regulon AM348_RS05545 SM00448 cheY-homologous receiver domain AM348_RS05550 SM00387 Histidine kinase-like ATPases AM348_RS05610 SM00354 helix_turn _helix lactose operon repressor AM348_RS05655 SM00829 Enoylreductase AM348_RS05675 SM00862 Transcriptional regulatory protein, C terminal AM348_RS05685 SM00869 Autotransporter beta-domain AM348_RS05715 SM00382 ATPases associated with a variety of cellular activities AM348_RS05785 SM00487 DEAD-like helicases superfamily AM348_RS05785 SM00490 helicase superfamily c-terminal domain AM348_RS05795 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM348_RS05795 SM00954 Region found in RelA / SpoT proteins AM348_RS05800 SM01409 AM348_RS05800 AM348_RS05805 SM00072 Guanylate kinase homologues. AM348_RS05810 SM00532 Ligase N family AM348_RS05875 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM348_RS05875 SM01232 AM348_RS05875 AM348_RS05940 SM00829 Enoylreductase AM348_RS05970 SM00450 Rhodanese Homology Domain AM348_RS05990 SM00971 Serine acetyltransferase, N-terminal AM348_RS06010 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS06010 SM00895 AM348_RS06010 AM348_RS06125 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS06140 SM00642 Alpha-amylase domain AM348_RS06150 SM00047 Lysozyme subfamily 2 AM348_RS06155 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS06200 SM00357 Cold shock protein domain AM348_RS06235 SM00354 helix_turn _helix lactose operon repressor AM348_RS06310 SM00382 ATPases associated with a variety of cellular activities AM348_RS06315 SM00382 ATPases associated with a variety of cellular activities AM348_RS06320 SM00382 ATPases associated with a variety of cellular activities AM348_RS06340 SM00052 Putative diguanylate phosphodiesterase AM348_RS06340 SM00267 diguanylate cyclase AM348_RS06370 SM00052 Putative diguanylate phosphodiesterase AM348_RS06400 SM00421 helix_turn_helix, Lux Regulon AM348_RS06425 SM01235 AM348_RS06425 AM348_RS06485 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS06485 SM00895 AM348_RS06485 AM348_RS06500 SM00829 Enoylreductase AM348_RS06550 SM00382 ATPases associated with a variety of cellular activities AM348_RS06585 SM00825 Beta-ketoacyl synthase AM348_RS06600 SM00825 Beta-ketoacyl synthase AM348_RS06655 SM00563 Phosphate acyltransferases AM348_RS06725 SM00382 ATPases associated with a variety of cellular activities AM348_RS06725 SM00962 SRP54-type protein, GTPase domain AM348_RS06725 SM00963 SRP54-type protein, helical bundle domain AM348_RS06730 SM00382 ATPases associated with a variety of cellular activities AM348_RS06775 SM00382 ATPases associated with a variety of cellular activities AM348_RS06780 SM00382 ATPases associated with a variety of cellular activities AM348_RS06805 SM00382 ATPases associated with a variety of cellular activities AM348_RS06855 SM00354 helix_turn _helix lactose operon repressor AM348_RS06890 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM348_RS06895 SM00642 Alpha-amylase domain AM348_RS06900 SM00642 Alpha-amylase domain AM348_RS06925 SM00450 Rhodanese Homology Domain AM348_RS06935 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS06935 SM01134 AM348_RS06935 AM348_RS06940 SM00421 helix_turn_helix, Lux Regulon AM348_RS06990 SM00899 AM348_RS06990 AM348_RS06995 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS06995 SM00732 Likely ribonuclease with RNase H fold. AM348_RS07005 SM00448 cheY-homologous receiver domain AM348_RS07005 SM00862 Transcriptional regulatory protein, C terminal AM348_RS07010 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS07010 SM00387 Histidine kinase-like ATPases AM348_RS07010 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS07030 SM00363 S4 RNA-binding domain AM348_RS07075 SM00965 Secretin and TonB N terminus short domain AM348_RS07120 SM00869 Autotransporter beta-domain AM348_RS07185 SM00100 Cyclic nucleotide-monophosphate binding domain AM348_RS07185 SM00419 helix_turn_helix, cAMP Regulatory protein AM348_RS07235 SM00382 ATPases associated with a variety of cellular activities AM348_RS07305 SM00838 Elongation factor G C-terminus AM348_RS07305 SM00889 Elongation factor G, domain IV AM348_RS07335 SM01403 AM348_RS07335 AM348_RS07355 SM01382 AM348_RS07355 AM348_RS07355 SM01383 AM348_RS07355 AM348_RS07370 SM00322 K homology RNA-binding domain AM348_RS07390 SM01374 AM348_RS07390 AM348_RS07395 SM00739 KOW (Kyprides, Ouzounis, Woese) motif. AM348_RS07460 SM00363 S4 RNA-binding domain AM348_RS07460 SM01390 AM348_RS07460 AM348_RS07465 SM00662 RNA polymerases D AM348_RS07480 SM00422 helix_turn_helix, mercury resistance AM348_RS07595 SM00382 ATPases associated with a variety of cellular activities AM348_RS07610 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS07655 SM01057 Eukaryotic-type carbonic anhydrase AM348_RS07675 SM00878 Biotin carboxylase C-terminal domain AM348_RS07700 SM00829 Enoylreductase AM348_RS07705 SM00052 Putative diguanylate phosphodiesterase AM348_RS07705 SM00267 diguanylate cyclase AM348_RS07735 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS07795 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM348_RS07800 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM348_RS07845 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS07845 SM00895 AM348_RS07845 AM348_RS07850 SM01130 AM348_RS07850 AM348_RS07895 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS07900 SM00073 Histidine Phosphotransfer domain AM348_RS07900 SM00091 PAS domain AM348_RS07900 SM00387 Histidine kinase-like ATPases AM348_RS07900 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS07900 SM00448 cheY-homologous receiver domain AM348_RS07940 SM00382 ATPases associated with a variety of cellular activities AM348_RS07970 SM00382 ATPases associated with a variety of cellular activities AM348_RS08055 SM01103 AM348_RS08055 AM348_RS08065 SM00382 ATPases associated with a variety of cellular activities AM348_RS08120 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS08140 SM01387 AM348_RS08140 AM348_RS08145 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS08145 SM00322 K homology RNA-binding domain AM348_RS08150 SM00028 Tetratricopeptide repeats AM348_RS08155 SM00487 DEAD-like helicases superfamily AM348_RS08155 SM00490 helicase superfamily c-terminal domain AM348_RS08190 SM00465 GIY-YIG type nucleases (URI domain) AM348_RS08200 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM348_RS08205 SM00749 bacterial OsmY and nodulation domain AM348_RS08235 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS08235 SM01134 AM348_RS08235 AM348_RS08240 SM00829 Enoylreductase AM348_RS08270 SM00858 AM348_RS08270 AM348_RS08415 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS08415 SM00895 AM348_RS08415 AM348_RS08430 SM00858 AM348_RS08430 AM348_RS08490 SM01038 Beta galactosidase small chain AM348_RS08495 SM00354 helix_turn _helix lactose operon repressor AM348_RS08510 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM348_RS08510 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS08525 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS08535 SM01120 AM348_RS08535 AM348_RS08550 SM00091 PAS domain AM348_RS08550 SM00382 ATPases associated with a variety of cellular activities AM348_RS08615 SM00400 zinc finger AM348_RS08615 SM00493 AM348_RS08615 AM348_RS08615 SM00766 DNA primase DnaG DnaB-binding AM348_RS08645 SM00988 UreE urease accessory protein, N-terminal domain AM348_RS08690 SM01207 AM348_RS08690 AM348_RS08695 SM00905 Dihydroneopterin aldolase AM348_RS08715 SM00287 Bacterial SH3 domain homologues AM348_RS08725 SM01118 AM348_RS08725 AM348_RS08825 SM00387 Histidine kinase-like ATPases AM348_RS08825 SM00433 TopoisomeraseII AM348_RS08840 SM00387 Histidine kinase-like ATPases AM348_RS08840 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS08845 SM00448 cheY-homologous receiver domain AM348_RS08845 SM00862 Transcriptional regulatory protein, C terminal AM348_RS08870 SM00434 DNA Topoisomerase IV AM348_RS08875 SM00563 Phosphate acyltransferases AM348_RS08890 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS08915 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS08970 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS08970 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS09145 SM00855 Phosphoglycerate mutase family AM348_RS09190 SM00478 endonuclease III AM348_RS09190 SM00525 AM348_RS09190 AM348_RS09210 SM00870 AM348_RS09210 AM348_RS09215 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS09225 SM01152 AM348_RS09225 AM348_RS09245 SM00732 Likely ribonuclease with RNase H fold. AM348_RS09270 SM00731 SprT homologues. AM348_RS09315 SM00861 Transketolase, pyrimidine binding domain AM348_RS09325 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM348_RS09420 SM01011 Aminopeptidase P, N-terminal domain AM348_RS09455 SM00822 AM348_RS09455 AM348_RS09470 SM01022 AM348_RS09470 AM348_RS09535 SM00257 Lysin motif AM348_RS09585 SM00248 ankyrin repeats AM348_RS09695 SM00354 helix_turn _helix lactose operon repressor AM348_RS09700 SM00354 helix_turn _helix lactose operon repressor AM348_RS09710 SM00563 Phosphate acyltransferases AM348_RS09735 SM00927 DNA mismatch repair enzyme MutH AM348_RS09750 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM348_RS09810 SM00646 AM348_RS09810 AM348_RS09830 SM00925 MltA specific insert domain AM348_RS09870 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS09870 SM01134 AM348_RS09870 AM348_RS09900 SM01007 Class II Aldolase and Adducin N-terminal domain AM348_RS09910 SM00279 Helix-hairpin-helix class 2 (Pol1 family) motifs AM348_RS09910 SM00475 5'-3' exonuclease AM348_RS09970 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM348_RS09975 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM348_RS09985 SM00073 Histidine Phosphotransfer domain AM348_RS09985 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS09985 SM00387 Histidine kinase-like ATPases AM348_RS09985 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS09985 SM00448 cheY-homologous receiver domain AM348_RS09995 SM00954 Region found in RelA / SpoT proteins AM348_RS10015 SM01192 AM348_RS10015 AM348_RS10015 SM01193 AM348_RS10015 AM348_RS10140 SM00257 Lysin motif AM348_RS10150 SM00347 helix_turn_helix multiple antibiotic resistance protein AM348_RS10170 SM00533 DNA-binding domain of DNA mismatch repair MUTS family AM348_RS10170 SM00534 ATPase domain of DNA mismatch repair MUTS family AM348_RS10180 SM00862 Transcriptional regulatory protein, C terminal AM348_RS10195 SM00382 ATPases associated with a variety of cellular activities AM348_RS10215 SM00052 Putative diguanylate phosphodiesterase AM348_RS10215 SM00267 diguanylate cyclase AM348_RS10225 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS10230 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS10235 SM00052 Putative diguanylate phosphodiesterase AM348_RS10235 SM00267 diguanylate cyclase AM348_RS10240 SM00052 Putative diguanylate phosphodiesterase AM348_RS10240 SM00267 diguanylate cyclase AM348_RS10245 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS10245 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS10255 SM00138 Methyltransferase, chemotaxis proteins AM348_RS10260 SM00073 Histidine Phosphotransfer domain AM348_RS10260 SM00260 Two component signalling adaptor domain AM348_RS10260 SM00387 Histidine kinase-like ATPases AM348_RS10260 SM00448 cheY-homologous receiver domain AM348_RS10260 SM01231 AM348_RS10260 AM348_RS10265 SM00448 cheY-homologous receiver domain AM348_RS10270 SM00073 Histidine Phosphotransfer domain AM348_RS10270 SM00267 diguanylate cyclase AM348_RS10270 SM00448 cheY-homologous receiver domain AM348_RS10275 SM00260 Two component signalling adaptor domain AM348_RS10305 SM00382 ATPases associated with a variety of cellular activities AM348_RS10325 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM348_RS10325 SM00382 ATPases associated with a variety of cellular activities AM348_RS10415 SM00354 helix_turn _helix lactose operon repressor AM348_RS10435 SM00849 Metallo-beta-lactamase superfamily AM348_RS10445 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM348_RS10445 SM00382 ATPases associated with a variety of cellular activities AM348_RS10455 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS10455 SM01134 AM348_RS10455 AM348_RS10495 SM00382 ATPases associated with a variety of cellular activities AM348_RS10505 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM348_RS10575 SM00347 helix_turn_helix multiple antibiotic resistance protein AM348_RS10605 SM00382 ATPases associated with a variety of cellular activities AM348_RS10640 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS10655 SM00528 Domain in histone-like proteins of HNS family AM348_RS10665 SM00450 Rhodanese Homology Domain AM348_RS10670 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM348_RS10680 SM00257 Lysin motif AM348_RS10680 SM00749 bacterial OsmY and nodulation domain AM348_RS10685 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS10685 SM00895 AM348_RS10685 AM348_RS10745 SM00448 cheY-homologous receiver domain AM348_RS10745 SM00862 Transcriptional regulatory protein, C terminal AM348_RS10750 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS10750 SM00387 Histidine kinase-like ATPases AM348_RS10750 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS10820 SM00947 Carbonic anhydrase AM348_RS10835 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS10845 SM00671 Sel1-like repeats. AM348_RS10850 SM00382 ATPases associated with a variety of cellular activities AM348_RS10885 SM00421 helix_turn_helix, Lux Regulon AM348_RS10885 SM00448 cheY-homologous receiver domain AM348_RS10890 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS10890 SM00387 Histidine kinase-like ATPases AM348_RS10890 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS10890 SM00448 cheY-homologous receiver domain AM348_RS10955 SM00382 ATPases associated with a variety of cellular activities AM348_RS10985 SM00634 Bacterial Ig-like domain (group 1) AM348_RS11000 SM00382 ATPases associated with a variety of cellular activities AM348_RS11055 SM01091 Transporter associated domain AM348_RS11065 SM00382 ATPases associated with a variety of cellular activities AM348_RS11065 SM00962 SRP54-type protein, GTPase domain AM348_RS11065 SM00963 SRP54-type protein, helical bundle domain AM348_RS11095 SM00267 diguanylate cyclase AM348_RS11115 SM00830 Chorismate mutase type II AM348_RS11120 SM00830 Chorismate mutase type II AM348_RS11140 SM00363 S4 RNA-binding domain AM348_RS11150 SM00382 ATPases associated with a variety of cellular activities AM348_RS11150 SM01086 C-terminal, D2-small domain, of ClpB protein AM348_RS11185 SM00155 Phospholipase D. Active site motifs. AM348_RS11190 SM00881 CoA binding domain AM348_RS11195 SM01144 AM348_RS11195 AM348_RS11210 SM00967 RNA 2'-O ribose methyltransferase substrate binding AM348_RS11215 SM00986 Uracil DNA glycosylase superfamily AM348_RS11215 SM00987 UreE urease accessory protein, C-terminal domain AM348_RS11235 SM00487 DEAD-like helicases superfamily AM348_RS11235 SM00490 helicase superfamily c-terminal domain AM348_RS11290 SM00358 Double-stranded RNA binding motif AM348_RS11290 SM00535 Ribonuclease III family AM348_RS11345 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS11350 SM01211 AM348_RS11350 AM348_RS11355 SM00387 Histidine kinase-like ATPases AM348_RS11355 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS11365 SM00382 ATPases associated with a variety of cellular activities AM348_RS11365 SM00448 cheY-homologous receiver domain AM348_RS11370 SM00938 Nitrogen regulatory protein P-II AM348_RS11470 SM00382 ATPases associated with a variety of cellular activities AM348_RS11525 SM00271 DnaJ molecular chaperone homology domain AM348_RS11555 SM00450 Rhodanese Homology Domain AM348_RS11560 SM01359 AM348_RS11560 AM348_RS11560 SM01360 AM348_RS11560 AM348_RS11570 SM00562 AM348_RS11570 AM348_RS11580 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS11600 SM00564 beta-propeller repeat AM348_RS11635 SM00116 Domain in cystathionine beta-synthase and other proteins. AM348_RS11635 SM01240 AM348_RS11635 AM348_RS11655 SM00052 Putative diguanylate phosphodiesterase AM348_RS11655 SM00267 diguanylate cyclase AM348_RS11740 SM01130 AM348_RS11740 AM348_RS11795 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS11795 SM00387 Histidine kinase-like ATPases AM348_RS11815 SM00861 Transketolase, pyrimidine binding domain AM348_RS11825 SM00919 Malic enzyme, NAD binding domain AM348_RS11825 SM01274 AM348_RS11825 AM348_RS11830 SM00877 AM348_RS11830 AM348_RS11855 SM00877 AM348_RS11855 AM348_RS11900 SM00877 AM348_RS11900 AM348_RS11905 SM00877 AM348_RS11905 AM348_RS11910 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS11925 SM00646 AM348_RS11925 AM348_RS11950 SM00822 AM348_RS11950 AM348_RS11970 SM00382 ATPases associated with a variety of cellular activities AM348_RS11985 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS12025 SM00771 ZipA, C-terminal domain (FtsZ-binding) AM348_RS12030 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM348_RS12030 SM00292 breast cancer carboxy-terminal domain AM348_RS12030 SM00532 Ligase N family AM348_RS12170 SM00448 cheY-homologous receiver domain AM348_RS12170 SM00850 LytTr DNA-binding domain AM348_RS12175 SM00387 Histidine kinase-like ATPases AM348_RS12220 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS12220 SM00387 Histidine kinase-like ATPases AM348_RS12220 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS12225 SM00448 cheY-homologous receiver domain AM348_RS12235 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS12235 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS12365 SM00463 Small MutS-related domain AM348_RS12405 SM00825 Beta-ketoacyl synthase AM348_RS12425 SM00859 Semialdehyde dehydrogenase, NAD binding domain AM348_RS12470 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS12475 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS12490 SM00382 ATPases associated with a variety of cellular activities AM348_RS12505 SM00905 Dihydroneopterin aldolase AM348_RS12565 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM348_RS12600 SM00928 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM348_RS12605 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS12605 SM00929 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM348_RS12645 SM00260 Two component signalling adaptor domain AM348_RS12645 SM00448 cheY-homologous receiver domain AM348_RS12685 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM348_RS12745 SM00852 Probable molybdopterin binding domain AM348_RS12810 SM00434 DNA Topoisomerase IV AM348_RS12815 SM00387 Histidine kinase-like ATPases AM348_RS12815 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS12815 SM00448 cheY-homologous receiver domain AM348_RS12820 SM00421 helix_turn_helix, Lux Regulon AM348_RS12820 SM00448 cheY-homologous receiver domain AM348_RS12825 SM00387 Histidine kinase-like ATPases AM348_RS12850 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS12860 SM00382 ATPases associated with a variety of cellular activities AM348_RS12865 SM00116 Domain in cystathionine beta-synthase and other proteins. AM348_RS12865 SM00924 MgtE intracellular N domain AM348_RS12895 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS12920 SM00382 ATPases associated with a variety of cellular activities AM348_RS12960 SM00421 helix_turn_helix, Lux Regulon AM348_RS12960 SM00448 cheY-homologous receiver domain AM348_RS12995 SM00487 DEAD-like helicases superfamily AM348_RS12995 SM00490 helicase superfamily c-terminal domain AM348_RS13000 SM00363 S4 RNA-binding domain AM348_RS13020 SM00382 ATPases associated with a variety of cellular activities AM348_RS13040 SM00052 Putative diguanylate phosphodiesterase AM348_RS13055 SM00014 Acid phosphatase homologues AM348_RS13060 SM00833 Cobalamin synthesis protein cobW C-terminal domain AM348_RS13075 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS13100 SM00841 Elongation factor P, C-terminal AM348_RS13100 SM01185 AM348_RS13100 AM348_RS13150 SM00518 AP endonuclease family 2 AM348_RS13205 SM00354 helix_turn _helix lactose operon repressor AM348_RS13215 SM00382 ATPases associated with a variety of cellular activities AM348_RS13320 SM01217 AM348_RS13320 AM348_RS13335 SM00382 ATPases associated with a variety of cellular activities AM348_RS13355 SM00422 helix_turn_helix, mercury resistance AM348_RS13360 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM348_RS13365 SM00448 cheY-homologous receiver domain AM348_RS13365 SM00850 LytTr DNA-binding domain AM348_RS13430 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS13430 SM00866 AM348_RS13430 AM348_RS13450 SM01133 AM348_RS13450 AM348_RS13455 SM00046 Diacylglycerol kinase catalytic domain (presumed) AM348_RS13460 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS13460 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM348_RS13475 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS13475 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM348_RS13480 SM00382 ATPases associated with a variety of cellular activities AM348_RS13490 SM00357 Cold shock protein domain AM348_RS13505 SM00644 AM348_RS13505 AM348_RS13575 SM00382 ATPases associated with a variety of cellular activities AM348_RS13580 SM00357 Cold shock protein domain AM348_RS13590 SM00382 ATPases associated with a variety of cellular activities AM348_RS13590 SM01086 C-terminal, D2-small domain, of ClpB protein AM348_RS13615 SM00448 cheY-homologous receiver domain AM348_RS13615 SM00862 Transcriptional regulatory protein, C terminal AM348_RS13620 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS13620 SM00387 Histidine kinase-like ATPases AM348_RS13620 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS13650 SM00478 endonuclease III AM348_RS13650 SM01009 AlkA N-terminal domain AM348_RS13655 SM00052 Putative diguanylate phosphodiesterase AM348_RS13655 SM00086 Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain) AM348_RS13655 SM00091 PAS domain AM348_RS13655 SM00267 diguanylate cyclase AM348_RS13680 SM01091 Transporter associated domain AM348_RS13690 SM00226 Low molecular weight phosphatase family AM348_RS13840 SM01350 AM348_RS13840 AM348_RS13845 SM00984 UDP binding domain AM348_RS13925 SM00479 AM348_RS13925 AM348_RS13930 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS13945 SM00936 Penicillin-binding protein 5, C-terminal domain AM348_RS13950 SM00871 Bacterial transcription activator, effector binding domain AM348_RS13980 SM00877 AM348_RS13980 AM348_RS13985 SM00877 AM348_RS13985 AM348_RS14025 SM00877 AM348_RS14025 AM348_RS14030 SM00877 AM348_RS14030 AM348_RS14060 SM00877 AM348_RS14060 AM348_RS14065 SM00877 AM348_RS14065 AM348_RS14075 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS14155 SM00382 ATPases associated with a variety of cellular activities AM348_RS14185 SM00382 ATPases associated with a variety of cellular activities AM348_RS14235 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM348_RS14245 SM00382 ATPases associated with a variety of cellular activities AM348_RS14260 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM348_RS14290 SM00507 HNH nucleases AM348_RS14325 SM00052 Putative diguanylate phosphodiesterase AM348_RS14335 SM00471 Metal dependent phosphohydrolases with conserved 'HD' motif. AM348_RS14375 SM00421 helix_turn_helix, Lux Regulon AM348_RS14425 SM00382 ATPases associated with a variety of cellular activities AM348_RS14465 SM00642 Alpha-amylase domain AM348_RS14505 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS14505 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM348_RS14520 SM00382 ATPases associated with a variety of cellular activities AM348_RS14525 SM00421 helix_turn_helix, Lux Regulon AM348_RS14535 SM00421 helix_turn_helix, Lux Regulon AM348_RS14535 SM00448 cheY-homologous receiver domain AM348_RS14540 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM348_RS14540 SM00465 GIY-YIG type nucleases (URI domain) AM348_RS14640 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS14690 SM00507 HNH nucleases AM348_RS14740 SM00507 HNH nucleases AM348_RS14790 SM00409 Immunoglobulin AM348_RS14880 SM00460 Transglutaminase/protease-like homologues AM348_RS14955 SM00382 ATPases associated with a variety of cellular activities AM348_RS15005 SM00073 Histidine Phosphotransfer domain AM348_RS15005 SM00260 Two component signalling adaptor domain AM348_RS15005 SM00387 Histidine kinase-like ATPases AM348_RS15005 SM01231 AM348_RS15005 AM348_RS15010 SM00260 Two component signalling adaptor domain AM348_RS15020 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS15020 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS15020 SM00319 Homologues of the ligand binding domain of Tar AM348_RS15025 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS15025 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS15025 SM00319 Homologues of the ligand binding domain of Tar AM348_RS15030 SM00138 Methyltransferase, chemotaxis proteins AM348_RS15035 SM00448 cheY-homologous receiver domain AM348_RS15040 SM00448 cheY-homologous receiver domain AM348_RS15075 SM00836 DALR anticodon binding domain AM348_RS15075 SM01016 Arginyl tRNA synthetase N terminal dom AM348_RS15135 SM00278 Helix-hairpin-helix DNA-binding motif class 1 AM348_RS15140 SM00382 ATPases associated with a variety of cellular activities AM348_RS15150 SM00382 ATPases associated with a variety of cellular activities AM348_RS15160 SM00257 Lysin motif AM348_RS15225 SM00479 AM348_RS15225 AM348_RS15285 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM348_RS15290 SM00945 ProQ/FINO family AM348_RS15295 SM00228 Domain present in PSD-95, Dlg, and ZO-1/2. AM348_RS15295 SM00245 tail specific protease AM348_RS15310 SM00346 helix_turn_helix isocitrate lyase regulation AM348_RS15340 SM00357 Cold shock protein domain AM348_RS15390 SM01091 Transporter associated domain AM348_RS15395 SM00052 Putative diguanylate phosphodiesterase AM348_RS15425 SM00487 DEAD-like helicases superfamily AM348_RS15425 SM00491 AM348_RS15425 AM348_RS15450 SM00341 Helicase and RNase D C-terminal AM348_RS15450 SM00474 3'-5' exonuclease AM348_RS15470 SM01329 AM348_RS15470 AM348_RS15525 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS15540 SM01005 Alanine racemase, C-terminal domain AM348_RS15545 SM01091 Transporter associated domain AM348_RS15590 SM00382 ATPases associated with a variety of cellular activities AM348_RS15615 SM01120 AM348_RS15615 AM348_RS15625 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM348_RS15630 SM00972 Spore Coat Protein U domain AM348_RS15645 SM00972 Spore Coat Protein U domain AM348_RS15650 SM00422 helix_turn_helix, mercury resistance AM348_RS15655 SM00052 Putative diguanylate phosphodiesterase AM348_RS15655 SM01034 Sensors of blue-light using FAD AM348_RS15675 SM00421 helix_turn_helix, Lux Regulon AM348_RS15690 SM00640 Glycosyl hydrolases family 32 AM348_RS15695 SM00354 helix_turn _helix lactose operon repressor AM348_RS15735 SM01400 AM348_RS15735 AM348_RS15755 SM00937 AM348_RS15755 AM348_RS15780 SM00822 AM348_RS15780 AM348_RS15820 SM01012 AM348_RS15820 AM348_RS15835 SM00382 ATPases associated with a variety of cellular activities AM348_RS15845 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS15855 SM00421 helix_turn_helix, Lux Regulon AM348_RS15855 SM00448 cheY-homologous receiver domain AM348_RS15860 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS15860 SM00387 Histidine kinase-like ATPases AM348_RS15875 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS15925 SM00448 cheY-homologous receiver domain AM348_RS15935 SM00528 Domain in histone-like proteins of HNS family AM348_RS15990 SM00382 ATPases associated with a variety of cellular activities AM348_RS15995 SM00382 ATPases associated with a variety of cellular activities AM348_RS16010 SM00155 Phospholipase D. Active site motifs. AM348_RS16080 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS16100 SM00382 ATPases associated with a variety of cellular activities AM348_RS16265 SM00635 Bacterial Ig-like domain 2 AM348_RS16315 SM00060 Fibronectin type 3 domain AM348_RS16395 SM00267 diguanylate cyclase AM348_RS16430 SM00481 DNA polymerase alpha chain like domain AM348_RS16440 SM00363 S4 RNA-binding domain AM348_RS16450 SM00822 AM348_RS16450 AM348_RS16465 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM348_RS16465 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM348_RS16465 SM00493 AM348_RS16465 AM348_RS16490 SM00014 Acid phosphatase homologues AM348_RS16500 SM00028 Tetratricopeptide repeats AM348_RS16505 SM00934 Orotidine 5'-phosphate decarboxylase / HUMPS family AM348_RS16520 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS16520 SM01134 AM348_RS16520 AM348_RS16535 SM00052 Putative diguanylate phosphodiesterase AM348_RS16535 SM00091 PAS domain AM348_RS16535 SM00267 diguanylate cyclase AM348_RS16545 SM00357 Cold shock protein domain AM348_RS16545 SM00955 AM348_RS16545 AM348_RS16565 SM00382 ATPases associated with a variety of cellular activities AM348_RS16570 SM00382 ATPases associated with a variety of cellular activities AM348_RS16600 SM00382 ATPases associated with a variety of cellular activities AM348_RS16630 SM00450 Rhodanese Homology Domain AM348_RS16645 SM00091 PAS domain AM348_RS16645 SM00382 ATPases associated with a variety of cellular activities AM348_RS16655 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM348_RS16670 SM00347 helix_turn_helix multiple antibiotic resistance protein AM348_RS16685 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS16685 SM01134 AM348_RS16685 AM348_RS16705 SM00829 Enoylreductase AM348_RS16725 SM00100 Cyclic nucleotide-monophosphate binding domain AM348_RS16725 SM00419 helix_turn_helix, cAMP Regulatory protein AM348_RS16735 SM00463 Small MutS-related domain AM348_RS16740 SM00091 PAS domain AM348_RS16740 SM00267 diguanylate cyclase AM348_RS16745 SM00052 Putative diguanylate phosphodiesterase AM348_RS16745 SM00267 diguanylate cyclase AM348_RS16750 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS16760 SM00487 DEAD-like helicases superfamily AM348_RS16760 SM00490 helicase superfamily c-terminal domain AM348_RS16795 SM00890 Domain of unknown function AM348_RS16850 SM00382 ATPases associated with a variety of cellular activities AM348_RS16850 SM00487 DEAD-like helicases superfamily AM348_RS16850 SM00490 helicase superfamily c-terminal domain AM348_RS16850 SM00847 Helicase associated domain (HA2) Add an annotation AM348_RS16870 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM348_RS16985 SM00829 Enoylreductase AM348_RS16995 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS16995 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS16995 SM00319 Homologues of the ligand binding domain of Tar AM348_RS17005 SM01131 AM348_RS17005 AM348_RS17010 SM01150 AM348_RS17010 AM348_RS17030 SM01005 Alanine racemase, C-terminal domain AM348_RS17065 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS17075 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS17110 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS17120 SM00382 ATPases associated with a variety of cellular activities AM348_RS17145 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS17195 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS17200 SM00829 Enoylreductase AM348_RS17225 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS17245 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS17260 SM00382 ATPases associated with a variety of cellular activities AM348_RS17265 SM00829 Enoylreductase AM348_RS17285 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM348_RS17290 SM00354 helix_turn _helix lactose operon repressor AM348_RS17300 SM00849 Metallo-beta-lactamase superfamily AM348_RS17305 SM00903 Flavin reductase like domain AM348_RS17335 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS17375 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS17400 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS17410 SM00382 ATPases associated with a variety of cellular activities AM348_RS17415 SM00919 Malic enzyme, NAD binding domain AM348_RS17415 SM01274 AM348_RS17415 AM348_RS17450 SM00882 Coenzyme A transferase AM348_RS17455 SM00882 Coenzyme A transferase AM348_RS17465 SM00382 ATPases associated with a variety of cellular activities AM348_RS17470 SM00382 ATPases associated with a variety of cellular activities AM348_RS17505 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS17505 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS17510 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS17540 SM00382 ATPases associated with a variety of cellular activities AM348_RS17565 SM00849 Metallo-beta-lactamase superfamily AM348_RS17700 SM00283 Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer). AM348_RS17700 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS17700 SM00319 Homologues of the ligand binding domain of Tar AM348_RS17725 SM00347 helix_turn_helix multiple antibiotic resistance protein AM348_RS17730 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS17750 SM00382 ATPases associated with a variety of cellular activities AM348_RS17755 SM00382 ATPases associated with a variety of cellular activities AM348_RS17785 SM00267 diguanylate cyclase AM348_RS17805 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS17805 SM00895 AM348_RS17805 AM348_RS17825 SM00922 Mandelate racemase / muconate lactonizing enzyme, C-terminal domain AM348_RS17905 SM00387 Histidine kinase-like ATPases AM348_RS17905 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS17910 SM00448 cheY-homologous receiver domain AM348_RS17910 SM00862 Transcriptional regulatory protein, C terminal AM348_RS17975 SM01002 Alanine dehydrogenase/PNT, C-terminal domain AM348_RS17975 SM01003 Alanine dehydrogenase/PNT, N-terminal domain AM348_RS18000 SM00448 cheY-homologous receiver domain AM348_RS18000 SM00862 Transcriptional regulatory protein, C terminal AM348_RS18015 SM00849 Metallo-beta-lactamase superfamily AM348_RS18030 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS18030 SM00387 Histidine kinase-like ATPases AM348_RS18030 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS18060 SM00354 helix_turn _helix lactose operon repressor AM348_RS18075 SM00267 diguanylate cyclase AM348_RS18130 SM00900 AM348_RS18130 AM348_RS18140 SM00478 endonuclease III AM348_RS18140 SM00525 AM348_RS18140 AM348_RS18165 SM00363 S4 RNA-binding domain AM348_RS18190 SM00347 helix_turn_helix multiple antibiotic resistance protein AM348_RS18240 SM00479 AM348_RS18240 AM348_RS18275 SM00354 helix_turn _helix lactose operon repressor AM348_RS18340 SM00052 Putative diguanylate phosphodiesterase AM348_RS18340 SM00267 diguanylate cyclase AM348_RS18360 SM00267 diguanylate cyclase AM348_RS18360 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS18370 SM00972 Spore Coat Protein U domain AM348_RS18385 SM00972 Spore Coat Protein U domain AM348_RS18445 SM00634 Bacterial Ig-like domain (group 1) AM348_RS18460 SM00382 ATPases associated with a variety of cellular activities AM348_RS18480 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS18505 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS18505 SM00895 AM348_RS18505 AM348_RS18530 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS18530 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM348_RS18535 SM00382 ATPases associated with a variety of cellular activities AM348_RS18570 SM00790 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM348_RS18585 SM00421 helix_turn_helix, Lux Regulon AM348_RS18585 SM00448 cheY-homologous receiver domain AM348_RS18590 SM00387 Histidine kinase-like ATPases AM348_RS18590 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS18605 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS18620 SM00382 ATPases associated with a variety of cellular activities AM348_RS18620 SM00930 AM348_RS18620 AM348_RS18640 SM00257 Lysin motif AM348_RS18660 SM00382 ATPases associated with a variety of cellular activities AM348_RS18680 SM00849 Metallo-beta-lactamase superfamily AM348_RS18735 SM00882 Coenzyme A transferase AM348_RS18745 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS18750 SM00893 Electron transfer flavoprotein domain AM348_RS18755 SM00893 Electron transfer flavoprotein domain AM348_RS18815 SM00382 ATPases associated with a variety of cellular activities AM348_RS18835 SM00382 ATPases associated with a variety of cellular activities AM348_RS18850 SM00411 bacterial (prokaryotic) histone like domain AM348_RS18855 SM00873 B3/4 domain AM348_RS18855 SM00874 tRNA synthetase B5 domain AM348_RS18855 SM00896 Ferredoxin-fold anticodon binding domain AM348_RS18885 SM00863 Threonyl and Alanyl tRNA synthetase second additional domain AM348_RS18950 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS18985 SM00465 GIY-YIG type nucleases (URI domain) AM348_RS19065 SM00382 ATPases associated with a variety of cellular activities AM348_RS19070 SM00450 Rhodanese Homology Domain AM348_RS19095 SM00839 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM348_RS19100 SM00436 Bacterial DNA topoisomeraes I ATP-binding domain AM348_RS19100 SM00437 Bacterial DNA topoisomerase I DNA-binding domain AM348_RS19100 SM00493 AM348_RS19100 AM348_RS19130 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS19135 SM00870 AM348_RS19135 AM348_RS19145 SM00636 AM348_RS19145 AM348_RS19150 SM00507 HNH nucleases AM348_RS19165 SM00846 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM348_RS19195 SM00763 PrkA AAA domain AM348_RS19210 SM00267 diguanylate cyclase AM348_RS19225 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS19250 SM00065 Domain present in phytochromes and cGMP-specific phosphodiesterases. AM348_RS19250 SM00267 diguanylate cyclase AM348_RS19270 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS19305 SM00382 ATPases associated with a variety of cellular activities AM348_RS19310 SM00382 ATPases associated with a variety of cellular activities AM348_RS19340 SM00052 Putative diguanylate phosphodiesterase AM348_RS19365 SM01329 AM348_RS19365 AM348_RS19400 SM00448 cheY-homologous receiver domain AM348_RS19400 SM00862 Transcriptional regulatory protein, C terminal AM348_RS19405 SM00387 Histidine kinase-like ATPases AM348_RS19410 SM00558 A domain family that is part of the cupin metalloenzyme superfamily. AM348_RS19420 SM00382 ATPases associated with a variety of cellular activities AM348_RS19460 SM00382 ATPases associated with a variety of cellular activities AM348_RS19480 SM00487 DEAD-like helicases superfamily AM348_RS19480 SM00490 helicase superfamily c-terminal domain AM348_RS19480 SM00982 AM348_RS19480 AM348_RS19480 SM01058 CarD-like/TRCF domain AM348_RS19485 SM00257 Lysin motif AM348_RS19675 SM00965 Secretin and TonB N terminus short domain AM348_RS19695 SM00382 ATPases associated with a variety of cellular activities AM348_RS19725 SM01266 AM348_RS19725 AM348_RS19735 SM00354 helix_turn _helix lactose operon repressor AM348_RS19750 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS19750 SM01134 AM348_RS19750 AM348_RS19755 SM00530 Helix-turn-helix XRE-family like proteins AM348_RS19810 SM00825 Beta-ketoacyl synthase AM348_RS19820 SM00822 AM348_RS19820 AM348_RS19825 SM00827 Acyl transferase domain in polyketide synthase (PKS) enzymes. AM348_RS19855 SM00363 S4 RNA-binding domain AM348_RS19865 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS19890 SM00047 Lysozyme subfamily 2 AM348_RS19935 SM00858 AM348_RS19935 AM348_RS20010 SM00867 YceI-like domain AM348_RS20015 SM00450 Rhodanese Homology Domain AM348_RS20030 SM00267 diguanylate cyclase AM348_RS20060 SM00155 Phospholipase D. Active site motifs. AM348_RS20065 SM00506 Appr-1"-p processing enzyme AM348_RS20090 SM00421 helix_turn_helix, Lux Regulon AM348_RS20120 SM00481 DNA polymerase alpha chain like domain AM348_RS20210 SM00418 helix_turn_helix, Arsenical Resistance Operon Repressor AM348_RS20250 SM00271 DnaJ molecular chaperone homology domain AM348_RS20295 SM00382 ATPases associated with a variety of cellular activities AM348_RS20340 SM00528 Domain in histone-like proteins of HNS family AM348_RS20490 SM00359 Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase AM348_RS20495 SM00992 Hemimethylated DNA-binding protein YccV like AM348_RS20500 SM00881 CoA binding domain AM348_RS20510 SM00851 MGS-like domain AM348_RS20580 SM00382 ATPases associated with a variety of cellular activities AM348_RS20585 SM00981 AM348_RS20585 AM348_RS20615 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS20630 SM00382 ATPases associated with a variety of cellular activities AM348_RS20660 SM00849 Metallo-beta-lactamase superfamily AM348_RS20735 SM00382 ATPases associated with a variety of cellular activities AM348_RS20740 SM00849 Metallo-beta-lactamase superfamily AM348_RS20745 SM00411 bacterial (prokaryotic) histone like domain AM348_RS20750 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS20825 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS20835 SM00382 ATPases associated with a variety of cellular activities AM348_RS20845 SM00843 AM348_RS20845 AM348_RS20850 SM00344 helix_turn_helix ASNC type AM348_RS20865 SM00382 ATPases associated with a variety of cellular activities AM348_RS20870 SM00382 ATPases associated with a variety of cellular activities AM348_RS20885 SM00316 Ribosomal protein S1-like RNA-binding domain AM348_RS20930 SM00382 ATPases associated with a variety of cellular activities AM348_RS21005 SM00014 Acid phosphatase homologues AM348_RS21010 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS21010 SM01134 AM348_RS21010 AM348_RS21015 SM00936 Penicillin-binding protein 5, C-terminal domain AM348_RS21050 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS21070 SM00382 ATPases associated with a variety of cellular activities AM348_RS21090 SM00852 Probable molybdopterin binding domain AM348_RS21125 SM00382 ATPases associated with a variety of cellular activities AM348_RS21140 SM00529 Helix-turn-helix diphteria tox regulatory element AM348_RS21170 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS21170 SM00079 Eukaryotic homologues of bacterial periplasmic substrate binding proteins. AM348_RS21180 SM00382 ATPases associated with a variety of cellular activities AM348_RS21205 SM00702 Prolyl 4-hydroxylase alpha subunit homologues. AM348_RS21230 SM00487 DEAD-like helicases superfamily AM348_RS21230 SM00488 AM348_RS21230 AM348_RS21230 SM00491 AM348_RS21230 AM348_RS21240 SM00998 Adenylosuccinate lyase C-terminus AM348_RS21245 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS21245 SM00866 AM348_RS21245 AM348_RS21250 SM00487 DEAD-like helicases superfamily AM348_RS21250 SM00490 helicase superfamily c-terminal domain AM348_RS21265 SM00382 ATPases associated with a variety of cellular activities AM348_RS21290 SM00155 Phospholipase D. Active site motifs. AM348_RS21320 SM00852 Probable molybdopterin binding domain AM348_RS21325 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS21340 SM00487 DEAD-like helicases superfamily AM348_RS21340 SM00490 helicase superfamily c-terminal domain AM348_RS21350 SM00382 ATPases associated with a variety of cellular activities AM348_RS21370 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS21370 SM00876 Biotin and Thiamin Synthesis associated domain AM348_RS21395 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS21395 SM00866 AM348_RS21395 AM348_RS21425 SM00382 ATPases associated with a variety of cellular activities AM348_RS21455 SM00382 ATPases associated with a variety of cellular activities AM348_RS21480 SM00855 Phosphoglycerate mutase family AM348_RS21655 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS21665 SM01007 Class II Aldolase and Adducin N-terminal domain AM348_RS21670 SM00420 helix_turn_helix, Deoxyribose operon repressor AM348_RS21670 SM01134 AM348_RS21670 AM348_RS21700 SM00881 CoA binding domain AM348_RS21715 SM00861 Transketolase, pyrimidine binding domain AM348_RS21775 SM00898 Formamidopyrimidine-DNA glycosylase N-terminal domain AM348_RS21775 SM01232 AM348_RS21775 AM348_RS21800 SM00797 Allophanate hydrolase subunit 2 AM348_RS21805 SM00796 Allophanate hydrolase subunit 1 AM348_RS21860 SM00387 Histidine kinase-like ATPases AM348_RS21860 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS21865 SM00448 cheY-homologous receiver domain AM348_RS21865 SM00862 Transcriptional regulatory protein, C terminal AM348_RS22020 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS22035 SM00116 Domain in cystathionine beta-synthase and other proteins. AM348_RS22035 SM01091 Transporter associated domain AM348_RS22045 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS22060 SM00382 ATPases associated with a variety of cellular activities AM348_RS22100 SM00855 Phosphoglycerate mutase family AM348_RS22130 SM00936 Penicillin-binding protein 5, C-terminal domain AM348_RS22145 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS22165 SM00357 Cold shock protein domain AM348_RS22180 SM00448 cheY-homologous receiver domain AM348_RS22185 SM00091 PAS domain AM348_RS22185 SM00387 Histidine kinase-like ATPases AM348_RS22190 SM00764 Citrate lyase ligase C-terminal domain AM348_RS22230 SM00903 Flavin reductase like domain AM348_RS22260 SM00926 Molybdopterin oxidoreductase Fe4S4 domain AM348_RS22295 SM00470 ParB-like nuclease domain AM348_RS22325 SM00869 Autotransporter beta-domain AM348_RS22335 SM00822 AM348_RS22335 AM348_RS22375 SM00382 ATPases associated with a variety of cellular activities AM348_RS22385 SM00824 Thioesterase AM348_RS22390 SM00923 MbtH-like protein AM348_RS22415 SM00861 Transketolase, pyrimidine binding domain AM348_RS22445 SM00382 ATPases associated with a variety of cellular activities AM348_RS22480 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS22485 SM00849 Metallo-beta-lactamase superfamily AM348_RS22510 SM00354 helix_turn _helix lactose operon repressor AM348_RS22545 SM00421 helix_turn_helix, Lux Regulon AM348_RS22550 SM00710 Parallel beta-helix repeats AM348_RS22550 SM00869 Autotransporter beta-domain AM348_RS22555 SM00052 Putative diguanylate phosphodiesterase AM348_RS22560 SM00421 helix_turn_helix, Lux Regulon AM348_RS22585 SM00342 helix_turn_helix, arabinose operon control protein AM348_RS22610 SM00448 cheY-homologous receiver domain AM348_RS22610 SM00862 Transcriptional regulatory protein, C terminal AM348_RS22615 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS22615 SM00387 Histidine kinase-like ATPases AM348_RS22615 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS22630 SM00849 Metallo-beta-lactamase superfamily AM348_RS22665 SM00448 cheY-homologous receiver domain AM348_RS22665 SM00862 Transcriptional regulatory protein, C terminal AM348_RS22675 SM00073 Histidine Phosphotransfer domain AM348_RS22675 SM00304 HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain AM348_RS22675 SM00387 Histidine kinase-like ATPases AM348_RS22675 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS22675 SM00448 cheY-homologous receiver domain AM348_RS22690 SM00421 helix_turn_helix, Lux Regulon AM348_RS22700 SM00421 helix_turn_helix, Lux Regulon AM348_RS22700 SM00448 cheY-homologous receiver domain AM348_RS22750 SM00840 AM348_RS22750 AM348_RS22775 SM01001 AIR carboxylase AM348_RS22785 SM00450 Rhodanese Homology Domain AM348_RS22795 SM00382 ATPases associated with a variety of cellular activities AM348_RS22795 SM00930 AM348_RS22795 AM348_RS22815 SM00382 ATPases associated with a variety of cellular activities AM348_RS22825 SM00822 AM348_RS22825 AM348_RS22840 SM00382 ATPases associated with a variety of cellular activities AM348_RS22845 SM00244 prohibitin homologues AM348_RS22865 SM00422 helix_turn_helix, mercury resistance AM348_RS22880 SM00729 Elongator protein 3, MiaB family, Radical SAM AM348_RS22900 SM00382 ATPases associated with a variety of cellular activities AM348_RS22965 SM00387 Histidine kinase-like ATPases AM348_RS22970 SM00493 AM348_RS22970 AM348_RS22980 SM00382 ATPases associated with a variety of cellular activities AM348_RS23050 SM01266 AM348_RS23050 AM348_RS23070 SM00052 Putative diguanylate phosphodiesterase AM348_RS23085 SM00345 helix_turn_helix gluconate operon transcriptional repressor AM348_RS23125 SM00938 Nitrogen regulatory protein P-II AM348_RS23135 SM00382 ATPases associated with a variety of cellular activities AM348_RS23140 SM00382 ATPases associated with a variety of cellular activities AM348_RS23145 SM00344 helix_turn_helix ASNC type AM348_RS23190 SM00411 bacterial (prokaryotic) histone like domain AM348_RS23195 SM00382 ATPases associated with a variety of cellular activities AM348_RS23195 SM00464 Found in ATP-dependent protease La (LON) AM348_RS23200 SM00382 ATPases associated with a variety of cellular activities AM348_RS23200 SM00994 ClpX C4-type zinc finger AM348_RS23200 SM01086 C-terminal, D2-small domain, of ClpB protein AM348_RS23280 SM00981 AM348_RS23280 AM348_RS23295 SM00861 Transketolase, pyrimidine binding domain AM348_RS23365 SM01323 AM348_RS23365 AM348_RS23410 SM00642 Alpha-amylase domain AM348_RS23430 SM00091 PAS domain AM348_RS23430 SM00387 Histidine kinase-like ATPases AM348_RS23430 SM00388 His Kinase A (phosphoacceptor) domain AM348_RS23435 SM00448 cheY-homologous receiver domain AM348_RS23435 SM00862 Transcriptional regulatory protein, C terminal AM348_RS23515 SM00267 diguanylate cyclase AM348_RS23525 SM00098 Alkaline phosphatase homologues AM348_RS23575 SM00869 Autotransporter beta-domain AM348_RS23580 SM01004 Delta-aminolevulinic acid dehydratase AM348_RS23595 SM00382 ATPases associated with a variety of cellular activities AM348_RS23600 SM00062 Bacterial periplasmic substrate-binding proteins AM348_RS23605 SM00421 helix_turn_helix, Lux Regulon AM348_RS23605 SM00448 cheY-homologous receiver domain AM348_RS23610 SM00387 Histidine kinase-like ATPases AM348_RS23630 SM00382 ATPases associated with a variety of cellular activities