locus-tag class description F3113_RS00005 PF00308 Bacterial dnaA protein F3113_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix F3113_RS00005 PF11638 DnaA N-terminal domain F3113_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain F3113_RS00010 PF02767 DNA polymerase III beta subunit, central domain F3113_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain F3113_RS00015 PF02463 RecF/RecN/SMC N terminal domain F3113_RS00020 PF01751 Toprim domain F3113_RS00020 PF00204 DNA gyrase B F3113_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus F3113_RS00020 PF18053 DNA gyrase B subunit insert domain F3113_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS00030 PF01494 FAD binding domain F3113_RS00035 PF07676 WD40-like Beta Propeller Repeat F3113_RS00035 PF12566 Protein of unknown function (DUF3748) F3113_RS00040 PF07119 Protein of unknown function (DUF1375) F3113_RS00045 PF00011 Hsp20/alpha crystallin family F3113_RS00050 PF00011 Hsp20/alpha crystallin family F3113_RS00055 PF06826 Predicted Permease Membrane Region F3113_RS00055 PF02080 TrkA-C domain F3113_RS00060 PF02656 Domain of unknown function (DUF202) F3113_RS00065 PF02656 Domain of unknown function (DUF202) F3113_RS00075 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS00080 PF02447 GntP family permease F3113_RS00085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS00085 PF03466 LysR substrate binding domain F3113_RS00095 PF07690 Major Facilitator Superfamily F3113_RS00105 PF13939 Toxin TisB, type I toxin-antitoxin system F3113_RS00110 PF08049 IlvB leader peptide F3113_RS00115 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS00115 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS00115 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS00120 PF01842 ACT domain F3113_RS00125 PF00455 DeoR C terminal sensor domain F3113_RS00125 PF08220 DeoR-like helix-turn-helix domain F3113_RS00130 PF00294 pfkB family carbohydrate kinase F3113_RS00135 PF07690 Major Facilitator Superfamily F3113_RS00145 PF00072 Response regulator receiver domain F3113_RS00145 PF00196 Bacterial regulatory proteins, luxR family F3113_RS00150 PF07730 Histidine kinase F3113_RS00150 PF05231 MASE1 F3113_RS00150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS00155 PF07690 Major Facilitator Superfamily F3113_RS00160 PF07690 Major Facilitator Superfamily F3113_RS00165 PF06711 Protein of unknown function (DUF1198) F3113_RS00175 PF01381 Helix-turn-helix F3113_RS00180 PF07690 Major Facilitator Superfamily F3113_RS00185 PF00232 Glycosyl hydrolase family 1 F3113_RS00200 PF00158 Sigma-54 interaction domain F3113_RS00200 PF00874 PRD domain F3113_RS00210 PF03830 PTS system sorbose subfamily IIB component F3113_RS00210 PF03610 PTS system fructose IIA component F3113_RS00215 PF03609 PTS system sorbose-specific iic component F3113_RS00220 PF03613 PTS system mannose/fructose/sorbose family IID component F3113_RS00225 PF03841 L-seryl-tRNA selenium transferase F3113_RS00230 PF07071 KDGP aldolase F3113_RS00235 PF04754 Putative transposase, YhgA-like F3113_RS00240 PF03180 NLPA lipoprotein F3113_RS00245 PF00892 EamA-like transporter family F3113_RS00255 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS00255 PF00107 Zinc-binding dehydrogenase F3113_RS00260 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS00260 PF03466 LysR substrate binding domain F3113_RS00265 PF03577 Peptidase family C69 F3113_RS00280 PF00196 Bacterial regulatory proteins, luxR family F3113_RS00285 PF03797 Autotransporter beta-domain F3113_RS00300 PF08845 Toxin SymE, type I toxin-antitoxin system F3113_RS00325 PF06755 CbtA_toxin of type IV toxin-antitoxin system F3113_RS00330 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A F3113_RS00335 PF06174 Protein of unknown function (DUF987) F3113_RS00340 PF04002 RadC-like JAB domain F3113_RS00345 PF06067 Domain of unknown function (DUF932) F3113_RS00400 PF02384 N-6 DNA Methylase F3113_RS00405 PF01420 Type I restriction modification DNA specificity domain F3113_RS00415 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) F3113_RS00415 PF11867 Domain of unknown function (DUF3387) F3113_RS00415 PF18766 SWI2/SNF2 ATPase F3113_RS00450 PF00589 Phage integrase family F3113_RS00450 PF13356 Arm DNA-binding domain F3113_RS00450 PF14659 Phage integrase, N-terminal SAM-like domain F3113_RS00455 PF13356 Arm DNA-binding domain F3113_RS00455 PF14659 Phage integrase, N-terminal SAM-like domain F3113_RS00455 PF00589 Phage integrase family F3113_RS00470 PF01055 Glycosyl hydrolases family 31 F3113_RS00470 PF13802 Galactose mutarotase-like F3113_RS00475 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS00475 PF05043 Mga helix-turn-helix domain F3113_RS00475 PF00874 PRD domain F3113_RS00475 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS00475 PF08279 HTH domain F3113_RS00480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS00480 PF02378 Phosphotransferase system, EIIC F3113_RS00480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS00485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS00490 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS00495 PF01116 Fructose-bisphosphate aldolase class-II F3113_RS00500 PF01116 Fructose-bisphosphate aldolase class-II F3113_RS00510 PF05170 AsmA family F3113_RS00515 PF00860 Permease family F3113_RS00520 PF03616 Sodium/glutamate symporter F3113_RS00525 PF00270 DEAD/DEAH box helicase F3113_RS00525 PF00271 Helicase conserved C-terminal domain F3113_RS00525 PF17191 RecG wedge domain F3113_RS00530 PF12105 SpoU, rRNA methylase, C-terminal F3113_RS00530 PF00588 SpoU rRNA Methylase family F3113_RS00535 PF02824 TGS domain F3113_RS00535 PF04607 Region found in RelA / SpoT proteins F3113_RS00535 PF13291 ACT domain F3113_RS00540 PF01192 RNA polymerase Rpb6 F3113_RS00545 PF00625 Guanylate kinase F3113_RS00550 PF03120 NAD-dependent DNA ligase OB-fold domain F3113_RS00550 PF01653 NAD-dependent DNA ligase adenylation domain F3113_RS00555 PF03458 UPF0126 domain F3113_RS00560 PF03755 YicC-like family, N-terminal region F3113_RS00560 PF08340 Domain of unknown function (DUF1732) F3113_RS00565 PF01138 3' exoribonuclease family, domain 1 F3113_RS00565 PF03725 3' exoribonuclease family, domain 2 F3113_RS00570 PF00156 Phosphoribosyl transferase domain F3113_RS00575 PF00440 Bacterial regulatory proteins, tetR family F3113_RS00580 PF00692 dUTPase F3113_RS00585 PF02441 Flavoprotein F3113_RS00585 PF04127 DNA / pantothenate metabolism flavoprotein F3113_RS00590 PF04002 RadC-like JAB domain F3113_RS00595 PF00830 Ribosomal L28 family F3113_RS00600 PF00471 Ribosomal protein L33 F3113_RS00605 PF06827 Zinc finger found in FPG and IleRS F3113_RS00605 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F3113_RS00605 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F3113_RS00610 PF01467 Cytidylyltransferase-like F3113_RS00615 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) F3113_RS00620 PF13439 Glycosyltransferase Family 4 F3113_RS00620 PF00534 Glycosyl transferases group 1 F3113_RS00630 PF01501 Glycosyl transferase family 8 F3113_RS00630 PF08437 Glycosyl transferase family 8 C-terminal F3113_RS00640 PF08437 Glycosyl transferase family 8 C-terminal F3113_RS00640 PF01501 Glycosyl transferase family 8 F3113_RS00655 PF04932 O-Antigen ligase F3113_RS00660 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F3113_RS00665 PF01075 Glycosyltransferase family 9 (heptosyltransferase) F3113_RS00670 PF01370 NAD dependent epimerase/dehydratase family F3113_RS00675 PF00155 Aminotransferase class I and II F3113_RS00680 PF00107 Zinc-binding dehydrogenase F3113_RS00680 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS00685 PF00535 Glycosyl transferase family 2 F3113_RS00690 PF04748 Divergent polysaccharide deacetylase F3113_RS00695 PF01551 Peptidase family M23 F3113_RS00700 PF06415 BPG-independent PGAM N-terminus (iPGM_N) F3113_RS00700 PF01676 Metalloenzyme superfamily F3113_RS00705 PF00581 Rhodanese-like domain F3113_RS00710 PF00462 Glutaredoxin F3113_RS00715 PF02556 Preprotein translocase subunit SecB F3113_RS00720 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus F3113_RS00720 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus F3113_RS00725 PF06426 Serine acetyltransferase, N-terminal F3113_RS00725 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS00730 PF00588 SpoU rRNA Methylase family F3113_RS00735 PF07690 Major Facilitator Superfamily F3113_RS00740 PF01070 FMN-dependent dehydrogenase F3113_RS00745 PF07729 FCD domain F3113_RS00745 PF00392 Bacterial regulatory proteins, gntR family F3113_RS00750 PF02652 L-lactate permease F3113_RS00755 PF10928 Protein of unknown function (DUF2810) F3113_RS00765 PF05068 Mannitol repressor F3113_RS00770 PF08125 Mannitol dehydrogenase C-terminal domain F3113_RS00770 PF01232 Mannitol dehydrogenase Rossmann domain F3113_RS00775 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS00775 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS00775 PF02378 Phosphotransferase system, EIIC F3113_RS00780 PF11742 Protein of unknown function (DUF3302) F3113_RS00785 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS00785 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS00790 PF00043 Glutathione S-transferase, C-terminal domain F3113_RS00790 PF13417 Glutathione S-transferase, N-terminal domain F3113_RS00795 PF03841 L-seryl-tRNA selenium transferase F3113_RS00795 PF12390 Selenocysteine synthase N terminal F3113_RS00800 PF09107 Elongation factor SelB, winged helix F3113_RS00800 PF09106 Elongation factor SelB, winged helix F3113_RS00800 PF03144 Elongation factor Tu domain 2 F3113_RS00800 PF00009 Elongation factor Tu GTP binding domain F3113_RS00805 PF00465 Iron-containing alcohol dehydrogenase F3113_RS00810 PF00171 Aldehyde dehydrogenase family F3113_RS00820 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS00820 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS00825 PF13737 Transposase DDE domain F3113_RS00830 PF03466 LysR substrate binding domain F3113_RS00830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS00835 PF06629 MltA-interacting protein MipA F3113_RS00840 PF07944 Beta-L-arabinofuranosidase, GH127 F3113_RS00850 PF12833 Helix-turn-helix domain F3113_RS00850 PF02311 AraC-like ligand binding domain F3113_RS00855 PF00596 Class II Aldolase and Adducin N-terminal domain F3113_RS00860 PF01261 Xylose isomerase-like TIM barrel F3113_RS00865 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3113_RS00870 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS00870 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS00875 PF07690 Major Facilitator Superfamily F3113_RS00880 PF16154 Domain of unknown function (DUF4862) F3113_RS00885 PF04074 YhcH/YjgK/YiaL F3113_RS00890 PF02615 Malate/L-lactate dehydrogenase F3113_RS00895 PF01614 Bacterial transcriptional regulator F3113_RS00895 PF09339 IclR helix-turn-helix domain F3113_RS00900 PF13247 4Fe-4S dicluster domain F3113_RS00905 PF00155 Aminotransferase class I and II F3113_RS00910 PF00128 Alpha amylase, catalytic domain F3113_RS00915 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F3113_RS00920 PF12833 Helix-turn-helix domain F3113_RS00930 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS00930 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS00935 PF05360 yiaA/B two helix domain F3113_RS00940 PF01757 Acyltransferase family F3113_RS00945 PF13983 YsaB-like lipoprotein F3113_RS00950 PF02091 Glycyl-tRNA synthetase alpha subunit F3113_RS00955 PF05746 DALR anticodon binding domain F3113_RS00955 PF02092 Glycyl-tRNA synthetase beta subunit F3113_RS00965 PF00313 'Cold-shock' DNA-binding domain F3113_RS00970 PF01381 Helix-turn-helix F3113_RS00975 PF11254 Protein of unknown function (DUF3053) F3113_RS00980 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3113_RS00980 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3113_RS00985 PF07690 Major Facilitator Superfamily F3113_RS00990 PF00294 pfkB family carbohydrate kinase F3113_RS01000 PF00356 Bacterial regulatory proteins, lacI family F3113_RS01005 PF13488 Glycine zipper F3113_RS01005 PF00691 OmpA family F3113_RS01010 PF00384 Molybdopterin oxidoreductase F3113_RS01010 PF01568 Molydopterin dinucleotide binding domain F3113_RS01010 PF18364 Molybdopterin oxidoreductase N-terminal domain F3113_RS01015 PF00583 Acetyltransferase (GNAT) family F3113_RS01020 PF03352 Methyladenine glycosylase F3113_RS01025 PF03797 Autotransporter beta-domain F3113_RS01030 PF07690 Major Facilitator Superfamily F3113_RS01035 PF08019 Phosphoethanolamine transferase EptA/EptB F3113_RS01035 PF00884 Sulfatase F3113_RS01055 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS01060 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS01065 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS01065 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS01070 PF00005 ABC transporter F3113_RS01070 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS01075 PF00005 ABC transporter F3113_RS01075 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS01080 PF02954 Bacterial regulatory protein, Fis family F3113_RS01080 PF00158 Sigma-54 interaction domain F3113_RS01080 PF00072 Response regulator receiver domain F3113_RS01085 PF03222 Tryptophan/tyrosine permease family F3113_RS01090 PF01053 Cys/Met metabolism PLP-dependent enzyme F3113_RS01095 PF13940 Toxin Ldr, type I toxin-antitoxin system F3113_RS01100 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS01100 PF00563 EAL domain F3113_RS01100 PF00672 HAMP domain F3113_RS01100 PF17154 Gammaproteobacterial periplasmic sensor domain F3113_RS01105 PF00375 Sodium:dicarboxylate symporter family F3113_RS01110 PF05193 Peptidase M16 inactive domain F3113_RS01110 PF00675 Insulinase (Peptidase family M16) F3113_RS01115 PF00294 pfkB family carbohydrate kinase F3113_RS01120 PF00563 EAL domain F3113_RS01125 PF05170 AsmA family F3113_RS01130 PF00083 Sugar (and other) transporter F3113_RS01130 PF07690 Major Facilitator Superfamily F3113_RS01135 PF03631 Virulence factor BrkB F3113_RS01140 PF03466 LysR substrate binding domain F3113_RS01140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS01155 PF12792 CSS motif domain associated with EAL F3113_RS01155 PF00563 EAL domain F3113_RS01160 PF00196 Bacterial regulatory proteins, luxR family F3113_RS01170 PF13302 Acetyltransferase (GNAT) domain F3113_RS01180 PF01204 Trehalase F3113_RS01185 PF03150 Di-haem cytochrome c peroxidase F3113_RS01185 PF14376 Haem-binding domain F3113_RS01185 PF00034 Cytochrome c F3113_RS01195 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS01195 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3113_RS01200 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ F3113_RS01205 PF01432 Peptidase family M3 F3113_RS01210 PF04445 Putative SAM-dependent methyltransferase F3113_RS01215 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS01220 PF02082 Transcriptional regulator F3113_RS01225 PF00854 POT family F3113_RS01230 PF00582 Universal stress protein family F3113_RS01235 PF10625 Universal stress protein B (UspB) F3113_RS01240 PF01384 Phosphate transporter family F3113_RS01250 PF08722 TnsA endonuclease N terminal F3113_RS01250 PF08721 TnsA endonuclease C terminal F3113_RS01265 PF13401 AAA domain F3113_RS01265 PF11426 Tn7 transposition regulator TnsC F3113_RS01300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS01300 PF00672 HAMP domain F3113_RS01300 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS01305 PF00486 Transcriptional regulatory protein, C terminal F3113_RS01305 PF00072 Response regulator receiver domain F3113_RS01310 PF02321 Outer membrane efflux protein F3113_RS01315 PF11604 Copper binding periplasmic protein CusF F3113_RS01320 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS01325 PF00873 AcrB/AcrD/AcrF family F3113_RS01345 PF01476 LysM domain F3113_RS01345 PF08525 Opacity-associated protein A N-terminal motif F3113_RS01345 PF01551 Peptidase family M23 F3113_RS01355 PF00394 Multicopper oxidase F3113_RS01355 PF07732 Multicopper oxidase F3113_RS01355 PF07731 Multicopper oxidase F3113_RS01360 PF05275 Copper resistance protein B precursor (CopB) F3113_RS01365 PF04234 CopC domain F3113_RS01370 PF05425 Copper resistance protein D F3113_RS01375 PF00072 Response regulator receiver domain F3113_RS01375 PF00486 Transcriptional regulatory protein, C terminal F3113_RS01380 PF00672 HAMP domain F3113_RS01380 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS01380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS01395 PF05717 IS66 Orf2 like protein F3113_RS01400 PF13005 zinc-finger binding domain of transposase IS66 F3113_RS01400 PF13007 Transposase C of IS166 homeodomain F3113_RS01400 PF13817 IS66 C-terminal element F3113_RS01400 PF03050 Transposase IS66 family F3113_RS01405 PF03448 MgtE intracellular N domain F3113_RS01405 PF01769 Divalent cation transporter F3113_RS01405 PF00571 CBS domain F3113_RS01410 PF13533 Biotin-lipoyl like F3113_RS01415 PF00005 ABC transporter F3113_RS01435 PF08753 NikR C terminal nickel binding domain F3113_RS01435 PF01402 Ribbon-helix-helix protein, copG family F3113_RS01440 PF01648 4'-phosphopantetheinyl transferase superfamily F3113_RS01445 PF01594 AI-2E family transporter F3113_RS01450 PF07690 Major Facilitator Superfamily F3113_RS01455 PF08786 DcrB F3113_RS01460 PF02592 Putative vitamin uptake transporter F3113_RS01465 PF01206 Sulfurtransferase TusA F3113_RS01470 PF00403 Heavy-metal-associated domain F3113_RS01475 PF07947 YhhN family F3113_RS01480 PF10694 Protein of unknown function (DUF2500) F3113_RS01500 PF06611 Protein of unknown function (DUF1145) F3113_RS01510 PF02881 SRP54-type protein, helical bundle domain F3113_RS01510 PF00448 SRP54-type protein, GTPase domain F3113_RS01515 PF00005 ABC transporter F3113_RS01520 PF18075 FtsX extracellular domain F3113_RS01520 PF02687 FtsX-like permease family F3113_RS01525 PF04542 Sigma-70 region 2 F3113_RS01525 PF04545 Sigma-70, region 4 F3113_RS01530 PF13458 Periplasmic binding protein F3113_RS01540 PF12568 Acetyltransferase (GNAT) domain, PanZ F3113_RS01545 PF13458 Periplasmic binding protein F3113_RS01550 PF02653 Branched-chain amino acid transport system / permease component F3113_RS01555 PF02653 Branched-chain amino acid transport system / permease component F3113_RS01555 PF11862 Domain of unknown function (DUF3382) F3113_RS01560 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3113_RS01560 PF00005 ABC transporter F3113_RS01565 PF00005 ABC transporter F3113_RS01575 PF13416 Bacterial extracellular solute-binding protein F3113_RS01580 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS01585 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS01590 PF17912 MalK OB fold domain F3113_RS01590 PF00005 ABC transporter F3113_RS01595 PF03009 Glycerophosphoryl diester phosphodiesterase family F3113_RS01600 PF10956 Protein of unknown function (DUF2756) F3113_RS01610 PF02126 Phosphotriesterase family F3113_RS01625 PF00294 pfkB family carbohydrate kinase F3113_RS01635 PF00583 Acetyltransferase (GNAT) family F3113_RS01640 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS01640 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3113_RS01645 PF17954 Quercetinase C-terminal cupin domain F3113_RS01645 PF02678 Pirin F3113_RS01650 PF00356 Bacterial regulatory proteins, lacI family F3113_RS01650 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS01655 PF01202 Shikimate kinase F3113_RS01660 PF02447 GntP family permease F3113_RS01675 PF01914 MarC family integral membrane protein F3113_RS01680 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3113_RS01680 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3113_RS01685 PF00128 Alpha amylase, catalytic domain F3113_RS01685 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3113_RS01685 PF02806 Alpha amylase, C-terminal all-beta domain F3113_RS01690 PF18390 Glycogen debranching enzyme C-terminal domain F3113_RS01690 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) F3113_RS01690 PF00128 Alpha amylase, catalytic domain F3113_RS01695 PF00483 Nucleotidyl transferase F3113_RS01700 PF08323 Starch synthase catalytic domain F3113_RS01700 PF00534 Glycosyl transferases group 1 F3113_RS01705 PF00343 Carbohydrate phosphorylase F3113_RS01710 PF16901 C-terminal domain of alpha-glycerophosphate oxidase F3113_RS01710 PF01266 FAD dependent oxidoreductase F3113_RS01715 PF00581 Rhodanese-like domain F3113_RS01720 PF01694 Rhomboid family F3113_RS01720 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease F3113_RS01725 PF08220 DeoR-like helix-turn-helix domain F3113_RS01725 PF00455 DeoR C terminal sensor domain F3113_RS01730 PF00196 Bacterial regulatory proteins, luxR family F3113_RS01730 PF17874 MalT-like TPR region F3113_RS01735 PF00343 Carbohydrate phosphorylase F3113_RS01740 PF02446 4-alpha-glucanotransferase F3113_RS01745 PF02447 GntP family permease F3113_RS01750 PF01106 NifU-like domain F3113_RS01750 PF01521 Iron-sulphur cluster biosynthesis F3113_RS01755 PF00156 Phosphoribosyl transferase domain F3113_RS01760 PF00561 alpha/beta hydrolase fold F3113_RS01770 PF09012 FeoC like transcriptional regulator F3113_RS01775 PF02421 Ferrous iron transport protein B F3113_RS01775 PF17910 FeoB cytosolic helical domain F3113_RS01775 PF07664 Ferrous iron transport protein B C terminus F3113_RS01775 PF07670 Nucleoside recognition F3113_RS01780 PF04023 FeoA domain F3113_RS01785 PF09371 Tex-like protein N-terminal domain F3113_RS01785 PF00575 S1 RNA binding domain F3113_RS01785 PF17674 HHH domain F3113_RS01785 PF16921 Tex protein YqgF-like domain F3113_RS01790 PF03449 Transcription elongation factor, N-terminal F3113_RS01790 PF01272 Transcription elongation factor, GreA/GreB, C-term F3113_RS01795 PF00486 Transcriptional regulatory protein, C terminal F3113_RS01795 PF00072 Response regulator receiver domain F3113_RS01800 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS01800 PF00672 HAMP domain F3113_RS01800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS01815 PF01293 Phosphoenolpyruvate carboxykinase F3113_RS01820 PF13687 Domain of unknown function (DUF4153) F3113_RS01825 PF01430 Hsp33 protein F3113_RS01830 PF01479 S4 domain F3113_RS01835 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS01840 PF07095 Intracellular growth attenuator protein IgaA F3113_RS01845 PF00293 NUDIX domain F3113_RS01850 PF00912 Transglycosylase F3113_RS01850 PF17092 Penicillin-binding protein OB-like domain F3113_RS01850 PF00905 Penicillin binding protein transpeptidase domain F3113_RS01860 PF05137 Fimbrial assembly protein (PilN) F3113_RS01870 PF10748 DNA utilization proteins HofP F3113_RS01875 PF03958 Bacterial type II/III secretion system short domain F3113_RS01875 PF00263 Bacterial type II and III secretion system protein F3113_RS01880 PF01202 Shikimate kinase F3113_RS01885 PF01761 3-dehydroquinate synthase F3113_RS01890 PF05036 Sporulation related domain F3113_RS01895 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3113_RS01900 PF00834 Ribulose-phosphate 3 epimerase family F3113_RS01905 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS01910 PF00579 tRNA synthetases class I (W and Y) F3113_RS01915 PF14503 YhfZ C-terminal domain F3113_RS01915 PF14502 Helix-turn-helix domain F3113_RS01925 PF01168 Alanine racemase, N-terminal domain F3113_RS01930 PF01676 Metalloenzyme superfamily F3113_RS01935 PF02126 Phosphotriesterase family F3113_RS01940 PF10941 Protein of unknown function DUF2620 F3113_RS01945 PF10797 Protein of unknown function F3113_RS01950 PF00155 Aminotransferase class I and II F3113_RS01955 PF13978 Protein of unknown function (DUF4223) F3113_RS01960 PF10414 Sirohaem synthase dimerisation region F3113_RS01960 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS01960 PF14824 Sirohaem biosynthesis protein central F3113_RS01965 PF01226 Formate/nitrite transporter F3113_RS01970 PF13806 Rieske-like [2Fe-2S] domain F3113_RS01975 PF04324 BFD-like [2Fe-2S] binding domain F3113_RS01975 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3113_RS01975 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS01975 PF18267 Rubredoxin NAD+ reductase C-terminal domain F3113_RS01975 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3113_RS01980 PF07690 Major Facilitator Superfamily F3113_RS01985 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3113_RS01990 PF10832 Protein of unknown function (DUF2559) F3113_RS01995 PF02661 Fic/DOC family F3113_RS02000 PF00117 Glutamine amidotransferase class-I F3113_RS02005 PF00202 Aminotransferase class-III F3113_RS02010 PF12805 FUSC-like inner membrane protein yccS F3113_RS02015 PF00027 Cyclic nucleotide-binding domain F3113_RS02015 PF13545 Crp-like helix-turn-helix domain F3113_RS02020 PF02566 OsmC-like protein F3113_RS02025 PF00485 Phosphoribulokinase / Uridine kinase family F3113_RS02030 PF06794 Uncharacterised protein family (UPF0270) F3113_RS02035 PF00561 alpha/beta hydrolase fold F3113_RS02045 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F3113_RS02045 PF14572 Phosphoribosyl synthetase-associated domain F3113_RS02050 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F3113_RS02055 PF12848 ABC transporter F3113_RS02055 PF00005 ABC transporter F3113_RS02060 PF02525 Flavodoxin-like fold F3113_RS02065 PF00999 Sodium/hydrogen exchanger family F3113_RS02065 PF02254 TrkA-N domain F3113_RS02070 PF09526 Probable metal-binding protein (DUF2387) F3113_RS02075 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3113_RS02080 PF04102 SlyX F3113_RS02085 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F3113_RS02085 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3113_RS02090 PF13309 HTH domain F3113_RS02090 PF08348 YheO-like PAS domain F3113_RS02095 PF02635 DsrE/DsrF-like family F3113_RS02100 PF02635 DsrE/DsrF-like family F3113_RS02105 PF04077 DsrH like protein F3113_RS02110 PF00164 Ribosomal protein S12/S23 F3113_RS02115 PF00177 Ribosomal protein S7p/S5e F3113_RS02120 PF00009 Elongation factor Tu GTP binding domain F3113_RS02120 PF03764 Elongation factor G, domain IV F3113_RS02120 PF03144 Elongation factor Tu domain 2 F3113_RS02120 PF14492 Elongation Factor G, domain II F3113_RS02120 PF00679 Elongation factor G C-terminus F3113_RS02125 PF00009 Elongation factor Tu GTP binding domain F3113_RS02125 PF03144 Elongation factor Tu domain 2 F3113_RS02125 PF03143 Elongation factor Tu C-terminal domain F3113_RS02130 PF04324 BFD-like [2Fe-2S] binding domain F3113_RS02135 PF00210 Ferritin-like domain F3113_RS02140 PF01478 Type IV leader peptidase family F3113_RS02145 PF00338 Ribosomal protein S10p/S20e F3113_RS02150 PF00297 Ribosomal protein L3 F3113_RS02155 PF00573 Ribosomal protein L4/L1 family F3113_RS02160 PF00276 Ribosomal protein L23 F3113_RS02165 PF03947 Ribosomal Proteins L2, C-terminal domain F3113_RS02165 PF00181 Ribosomal Proteins L2, RNA binding domain F3113_RS02170 PF00203 Ribosomal protein S19 F3113_RS02175 PF00237 Ribosomal protein L22p/L17e F3113_RS02180 PF07650 KH domain F3113_RS02180 PF00189 Ribosomal protein S3, C-terminal domain F3113_RS02185 PF00252 Ribosomal protein L16p/L10e F3113_RS02190 PF00831 Ribosomal L29 protein F3113_RS02195 PF00366 Ribosomal protein S17 F3113_RS02200 PF00238 Ribosomal protein L14p/L23e F3113_RS02205 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 F3113_RS02205 PF00467 KOW motif F3113_RS02210 PF00673 ribosomal L5P family C-terminus F3113_RS02210 PF00281 Ribosomal protein L5 F3113_RS02215 PF00253 Ribosomal protein S14p/S29e F3113_RS02220 PF00410 Ribosomal protein S8 F3113_RS02225 PF00347 Ribosomal protein L6 F3113_RS02230 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast F3113_RS02235 PF00333 Ribosomal protein S5, N-terminal domain F3113_RS02235 PF03719 Ribosomal protein S5, C-terminal domain F3113_RS02240 PF00327 Ribosomal protein L30p/L7e F3113_RS02245 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A F3113_RS02250 PF00344 SecY translocase F3113_RS02255 PF00444 Ribosomal protein L36 F3113_RS02260 PF00416 Ribosomal protein S13/S18 F3113_RS02265 PF00411 Ribosomal protein S11 F3113_RS02270 PF00163 Ribosomal protein S4/S9 N-terminal domain F3113_RS02270 PF01479 S4 domain F3113_RS02275 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain F3113_RS02275 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain F3113_RS02275 PF01000 RNA polymerase Rpb3/RpoA insert domain F3113_RS02280 PF01196 Ribosomal protein L17 F3113_RS02285 PF09350 Domain of unknown function (DUF1992) F3113_RS02290 PF13411 MerR HTH family regulatory protein F3113_RS02295 PF03889 Alternative ribosome-rescue factor A F3113_RS02300 PF01741 Large-conductance mechanosensitive channel, MscL F3113_RS02305 PF02254 TrkA-N domain F3113_RS02305 PF02080 TrkA-C domain F3113_RS02310 PF01029 NusB family F3113_RS02310 PF01189 16S rRNA methyltransferase RsmB/F F3113_RS02315 PF02911 Formyl transferase, C-terminal domain F3113_RS02315 PF00551 Formyl transferase F3113_RS02320 PF01327 Polypeptide deformylase F3113_RS02325 PF17782 DprA winged helix domain F3113_RS02325 PF02481 DNA recombination-mediator protein A F3113_RS02330 PF04361 Protein of unknown function (DUF494) F3113_RS02335 PF01396 Topoisomerase DNA binding C4 zinc finger F3113_RS02340 PF01300 Telomere recombination F3113_RS02345 PF08501 Shikimate dehydrogenase substrate binding domain F3113_RS02345 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3113_RS02345 PF01488 Shikimate / quinate 5-dehydrogenase F3113_RS02350 PF07369 Protein of unknown function (DUF1488) F3113_RS02355 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS02395 PF00005 ABC transporter F3113_RS02400 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS02405 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS02410 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS02420 PF00873 AcrB/AcrD/AcrF family F3113_RS02425 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS02425 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS02430 PF00440 Bacterial regulatory proteins, tetR family F3113_RS02430 PF08361 MAATS-type transcriptional repressor, C-terminal region F3113_RS02435 PF10831 Protein of unknown function (DUF2556) F3113_RS02440 PF01555 DNA methylase F3113_RS02505 PF02954 Bacterial regulatory protein, Fis family F3113_RS02510 PF01207 Dihydrouridine synthase (Dus) F3113_RS02515 PF00194 Eukaryotic-type carbonic anhydrase F3113_RS02525 PF00474 Sodium:solute symporter family F3113_RS02530 PF06196 Protein of unknown function (DUF997) F3113_RS02535 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3113_RS02535 PF00289 Biotin carboxylase, N-terminal domain F3113_RS02535 PF02785 Biotin carboxylase C-terminal domain F3113_RS02540 PF00364 Biotin-requiring enzyme F3113_RS02545 PF01794 Ferric reductase like transmembrane component F3113_RS02550 PF00174 Oxidoreductase molybdopterin binding domain F3113_RS02555 PF00107 Zinc-binding dehydrogenase F3113_RS02555 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS02560 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS02560 PF00563 EAL domain F3113_RS02560 PF17157 Gammaproteobacterial periplasmic sensor domain F3113_RS02575 PF04085 rod shape-determining protein MreC F3113_RS02580 PF04093 rod shape-determining protein MreD F3113_RS02585 PF02545 Maf-like protein F3113_RS02590 PF00575 S1 RNA binding domain F3113_RS02590 PF10150 Ribonuclease E/G family F3113_RS02595 PF13502 AsmA-like C-terminal region F3113_RS02595 PF13116 Protein of unknown function F3113_RS02600 PF01523 Putative modulator of DNA gyrase F3113_RS02605 PF03466 LysR substrate binding domain F3113_RS02605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS02610 PF07869 Protein of unknown function (DUF1656) F3113_RS02615 PF13533 Biotin-lipoyl like F3113_RS02620 PF04632 Fusaric acid resistance protein family F3113_RS02625 PF01337 Barstar (barnase inhibitor) F3113_RS02635 PF01316 Arginine repressor, DNA binding domain F3113_RS02635 PF02863 Arginine repressor, C-terminal domain F3113_RS02640 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain F3113_RS02640 PF00056 lactate/malate dehydrogenase, NAD binding domain F3113_RS02645 PF13180 PDZ domain F3113_RS02650 PF13180 PDZ domain F3113_RS02650 PF00595 PDZ domain F3113_RS02655 PF06295 Protein of unknown function (DUF1043) F3113_RS02660 PF03969 AFG1-like ATPase F3113_RS02665 PF00572 Ribosomal protein L13 F3113_RS02670 PF00380 Ribosomal protein S9/S16 F3113_RS02675 PF00043 Glutathione S-transferase, C-terminal domain F3113_RS02675 PF02798 Glutathione S-transferase, N-terminal domain F3113_RS02680 PF04386 Stringent starvation protein B F3113_RS02685 PF03606 C4-dicarboxylate anaerobic carrier F3113_RS02690 PF00392 Bacterial regulatory proteins, gntR family F3113_RS02690 PF07729 FCD domain F3113_RS02695 PF00701 Dihydrodipicolinate synthetase family F3113_RS02700 PF07690 Major Facilitator Superfamily F3113_RS02705 PF00480 ROK family F3113_RS02710 PF04074 YhcH/YjgK/YiaL F3113_RS02715 PF07969 Amidohydrolase family F3113_RS02720 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin F3113_RS02725 PF17761 DUF1016 N-terminal domain F3113_RS02725 PF06250 YhcG PDDEXK nuclease domain F3113_RS02730 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS02730 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3113_RS02735 PF01645 Conserved region in glutamate synthase F3113_RS02735 PF01493 GXGXG motif F3113_RS02735 PF00310 Glutamine amidotransferases class-II F3113_RS02735 PF04898 Glutamate synthase central domain F3113_RS02740 PF16199 Radical_SAM C-terminal domain F3113_RS02740 PF04055 Radical SAM superfamily F3113_RS02745 PF00989 PAS fold F3113_RS02745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS02745 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS02745 PF18415 Histidine kinase receptor ArcB trans-membrane domain F3113_RS02745 PF01627 Hpt domain F3113_RS02745 PF00072 Response regulator receiver domain F3113_RS02755 PF00912 Transglycosylase F3113_RS02760 PF00381 PTS HPr component phosphorylation site F3113_RS02765 PF03668 P-loop ATPase protein family F3113_RS02770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS02775 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F3113_RS02780 PF04963 Sigma-54 factor, core binding domain F3113_RS02780 PF04552 Sigma-54, DNA binding domain F3113_RS02780 PF00309 Sigma-54 factor, Activator interacting domain (AID) F3113_RS02785 PF12399 Branched-chain amino acid ATP-binding cassette transporter F3113_RS02785 PF00005 ABC transporter F3113_RS02790 PF03968 OstA-like protein F3113_RS02795 PF06835 Lipopolysaccharide-assembly, LptC-related F3113_RS02805 PF00571 CBS domain F3113_RS02805 PF01380 SIS domain F3113_RS02810 PF01699 Sodium/calcium exchanger protein F3113_RS02815 PF00005 ABC transporter F3113_RS02820 PF02405 Permease MlaE F3113_RS02825 PF02470 MlaD protein F3113_RS02830 PF05494 MlaC protein F3113_RS02835 PF13466 STAS domain F3113_RS02840 PF01722 BolA-like protein F3113_RS02845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3113_RS02850 PF13693 Winged helix-turn-helix DNA-binding F3113_RS02855 PF00348 Polyprenyl synthetase F3113_RS02860 PF00829 Ribosomal prokaryotic L21 protein F3113_RS02865 PF01016 Ribosomal L27 protein F3113_RS02870 PF00892 EamA-like transporter family F3113_RS02875 PF01926 50S ribosome-binding GTPase F3113_RS02875 PF01018 GTP1/OBG F3113_RS02880 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family F3113_RS02885 PF03449 Transcription elongation factor, N-terminal F3113_RS02885 PF01272 Transcription elongation factor, GreA/GreB, C-term F3113_RS02890 PF01985 CRS1 / YhbY (CRM) domain F3113_RS02895 PF01728 FtsJ-like methyltransferase F3113_RS02900 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS02900 PF17862 AAA+ lid domain F3113_RS02900 PF06480 FtsH Extracellular F3113_RS02900 PF01434 Peptidase family M41 F3113_RS02905 PF00809 Pterin binding enzyme F3113_RS02910 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3113_RS02910 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3113_RS02910 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3113_RS02910 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3113_RS02915 PF03606 C4-dicarboxylate anaerobic carrier F3113_RS02920 PF01979 Amidohydrolase family F3113_RS02925 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS02925 PF03466 LysR substrate binding domain F3113_RS02930 PF03840 Preprotein translocase SecG subunit F3113_RS02940 PF00764 Arginosuccinate synthase F3113_RS02950 PF17384 RimP C-terminal SH3 domain F3113_RS02950 PF02576 RimP N-terminal domain F3113_RS02955 PF13184 NusA-like KH domain F3113_RS02955 PF00575 S1 RNA binding domain F3113_RS02955 PF08529 NusA N-terminal domain F3113_RS02960 PF08364 Bacterial translation initiation factor IF-2 associated region F3113_RS02960 PF11987 Translation-initiation factor 2 F3113_RS02960 PF00009 Elongation factor Tu GTP binding domain F3113_RS02960 PF04760 Translation initiation factor IF-2, N-terminal region F3113_RS02965 PF02033 Ribosome-binding factor A F3113_RS02970 PF09157 Pseudouridine synthase II TruB, C-terminal F3113_RS02970 PF16198 tRNA pseudouridylate synthase B C-terminal domain F3113_RS02970 PF01509 TruB family pseudouridylate synthase (N terminal domain) F3113_RS02975 PF00312 Ribosomal protein S15 F3113_RS02980 PF00013 KH domain F3113_RS02980 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain F3113_RS02980 PF01138 3' exoribonuclease family, domain 1 F3113_RS02980 PF03725 3' exoribonuclease family, domain 2 F3113_RS02980 PF00575 S1 RNA binding domain F3113_RS02985 PF13181 Tetratricopeptide repeat F3113_RS02985 PF07719 Tetratricopeptide repeat F3113_RS02995 PF03880 DbpA RNA binding domain F3113_RS02995 PF00270 DEAD/DEAH box helicase F3113_RS02995 PF00271 Helicase conserved C-terminal domain F3113_RS02995 PF12343 Cold shock protein DEAD box A F3113_RS03000 PF03222 Tryptophan/tyrosine permease family F3113_RS03005 PF00296 Luciferase-like monooxygenase F3113_RS03010 PF01136 Peptidase family U32 F3113_RS03015 PF01136 Peptidase family U32 F3113_RS03020 PF02036 SCP-2 sterol transfer family F3113_RS03025 PF13508 Acetyltransferase (GNAT) domain F3113_RS03030 PF01541 GIY-YIG catalytic domain F3113_RS03040 PF13460 NAD(P)H-binding F3113_RS03045 PF04972 BON domain F3113_RS03050 PF13580 SIS domain F3113_RS03055 PF02021 Uncharacterised protein family UPF0102 F3113_RS03060 PF04348 LppC putative lipoprotein F3113_RS03065 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS03070 PF01116 Fructose-bisphosphate aldolase class-II F3113_RS03075 PF01380 SIS domain F3113_RS03080 PF01979 Amidohydrolase family F3113_RS03085 PF03610 PTS system fructose IIA component F3113_RS03090 PF03613 PTS system mannose/fructose/sorbose family IID component F3113_RS03095 PF03609 PTS system sorbose-specific iic component F3113_RS03100 PF03830 PTS system sorbose subfamily IIB component F3113_RS03105 PF08013 Tagatose 6 phosphate kinase F3113_RS03110 PF00455 DeoR C terminal sensor domain F3113_RS03110 PF08220 DeoR-like helix-turn-helix domain F3113_RS03115 PF00455 DeoR C terminal sensor domain F3113_RS03115 PF08220 DeoR-like helix-turn-helix domain F3113_RS03120 PF00480 ROK family F3113_RS03125 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3113_RS03125 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS03130 PF17912 MalK OB fold domain F3113_RS03130 PF00005 ABC transporter F3113_RS03135 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS03140 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS03145 PF01547 Bacterial extracellular solute-binding protein F3113_RS03150 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F3113_RS03150 PF08666 SAF domain F3113_RS03155 PF07690 Major Facilitator Superfamily F3113_RS03160 PF03328 HpcH/HpaI aldolase/citrate lyase family F3113_RS03165 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3113_RS03165 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3113_RS03170 PF02595 Glycerate kinase family F3113_RS03190 PF02796 Helix-turn-helix domain of resolvase F3113_RS03190 PF00239 Resolvase, N terminal domain F3113_RS03195 PF12445 Flagellin protein F3113_RS03195 PF00669 Bacterial flagellin N-terminal helical region F3113_RS03195 PF00700 Bacterial flagellin C-terminal helical region F3113_RS03200 PF03614 Repressor of phase-1 flagellin F3113_RS03210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS03210 PF03466 LysR substrate binding domain F3113_RS03215 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS03220 PF03222 Tryptophan/tyrosine permease family F3113_RS03225 PF00871 Acetokinase family F3113_RS03230 PF02901 Pyruvate formate lyase-like F3113_RS03230 PF01228 Glycine radical F3113_RS03235 PF01042 Endoribonuclease L-PSP F3113_RS03240 PF03313 Serine dehydratase alpha chain F3113_RS03240 PF03315 Serine dehydratase beta chain F3113_RS03250 PF03313 Serine dehydratase alpha chain F3113_RS03260 PF17954 Quercetinase C-terminal cupin domain F3113_RS03260 PF02678 Pirin F3113_RS03265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS03265 PF03466 LysR substrate binding domain F3113_RS03270 PF05656 Protein of unknown function (DUF805) F3113_RS03275 PF13409 Glutathione S-transferase, N-terminal domain F3113_RS03280 PF07681 DoxX F3113_RS03285 PF13997 YqjK-like protein F3113_RS03290 PF07332 Putative Actinobacterial Holin-X, holin superfamily III F3113_RS03295 PF05957 Bacterial protein of unknown function (DUF883) F3113_RS03300 PF06476 Protein of unknown function (DUF1090) F3113_RS03305 PF13721 SecD export protein N-terminal TM region F3113_RS03310 PF09335 SNARE associated Golgi protein F3113_RS03315 PF00392 Bacterial regulatory proteins, gntR family F3113_RS03315 PF07729 FCD domain F3113_RS03320 PF07690 Major Facilitator Superfamily F3113_RS03325 PF02614 Glucuronate isomerase F3113_RS03330 PF08666 SAF domain F3113_RS03330 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus F3113_RS03335 PF10688 Bacterial inner membrane protein F3113_RS03340 PF00375 Sodium:dicarboxylate symporter family F3113_RS03345 PF03741 Integral membrane protein TerC family F3113_RS03350 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS03355 PF01863 Protein of unknown function DUF45 F3113_RS03360 PF05175 Methyltransferase small domain F3113_RS03365 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3113_RS03365 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS03370 PF01204 Trehalase F3113_RS03380 PF13520 Amino acid permease F3113_RS03385 PF04074 YhcH/YjgK/YiaL F3113_RS03390 PF16353 Domain of unknown function(DUF4981) F3113_RS03390 PF02929 Beta galactosidase small chain F3113_RS03390 PF02837 Glycosyl hydrolases family 2, sugar binding domain F3113_RS03390 PF00703 Glycosyl hydrolases family 2 F3113_RS03390 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F3113_RS03395 PF00356 Bacterial regulatory proteins, lacI family F3113_RS03400 PF01588 Putative tRNA binding domain F3113_RS03405 PF00202 Aminotransferase class-III F3113_RS03410 PF08447 PAS fold F3113_RS03410 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS03415 PF03551 Transcriptional regulator PadR-like family F3113_RS03420 PF08021 Siderophore-interacting FAD-binding domain F3113_RS03420 PF04954 Siderophore-interacting protein F3113_RS03435 PF02733 Dak1 domain F3113_RS03435 PF02734 DAK2 domain F3113_RS03440 PF00465 Iron-containing alcohol dehydrogenase F3113_RS03445 PF00158 Sigma-54 interaction domain F3113_RS03445 PF00989 PAS fold F3113_RS03445 PF02954 Bacterial regulatory protein, Fis family F3113_RS03450 PF01923 Cobalamin adenosyltransferase F3113_RS03455 PF02288 Dehydratase medium subunit F3113_RS03460 PF00465 Iron-containing alcohol dehydrogenase F3113_RS03465 PF03928 Haem-degrading F3113_RS03470 PF02286 Dehydratase large subunit F3113_RS03475 PF02288 Dehydratase medium subunit F3113_RS03480 PF02287 Dehydratase small subunit F3113_RS03485 PF08841 Diol dehydratase reactivase ATPase-like domain F3113_RS03485 PF18427 DD-reactivating factor swiveling domain F3113_RS03490 PF08986 Domain of unknown function (DUF1889) F3113_RS03500 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS03500 PF00589 Phage integrase family F3113_RS03515 PF06892 Phage regulatory protein CII (CP76) F3113_RS03535 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3113_RS03540 PF05840 Bacteriophage replication gene A protein (GPA) F3113_RS03700 PF04606 Ogr/Delta-like zinc finger F3113_RS03710 PF03167 Uracil DNA glycosylase superfamily F3113_RS03715 PF07715 TonB-dependent Receptor Plug Domain F3113_RS03715 PF00593 TonB dependent receptor F3113_RS03725 PF03979 Sigma-70 factor, region 1.1 F3113_RS03725 PF04546 Sigma-70, non-essential region F3113_RS03725 PF04542 Sigma-70 region 2 F3113_RS03725 PF04545 Sigma-70, region 4 F3113_RS03725 PF00140 Sigma-70 factor, region 1.2 F3113_RS03725 PF04539 Sigma-70 region 3 F3113_RS03730 PF10410 DnaB-helicase binding domain of primase F3113_RS03730 PF08275 DNA primase catalytic core, N-terminal domain F3113_RS03730 PF08278 DNA primase DnaG DnaB-binding F3113_RS03730 PF01807 CHC2 zinc finger F3113_RS03735 PF01165 Ribosomal protein S21 F3113_RS03740 PF00814 Glycoprotease family F3113_RS03745 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3113_RS03750 PF01730 UreF F3113_RS03755 PF05194 UreE urease accessory protein, C-terminal domain F3113_RS03755 PF02814 UreE urease accessory protein, N-terminal domain F3113_RS03760 PF00449 Urease alpha-subunit, N-terminal domain F3113_RS03760 PF01979 Amidohydrolase family F3113_RS03765 PF00699 Urease beta subunit F3113_RS03770 PF00547 Urease, gamma subunit F3113_RS03775 PF01774 UreD urease accessory protein F3113_RS03780 PF00939 Sodium:sulfate symporter transmembrane region F3113_RS03785 PF05683 Fumarase C-terminus F3113_RS03790 PF05681 Fumarate hydratase (Fumerase) F3113_RS03795 PF03466 LysR substrate binding domain F3113_RS03795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS03800 PF02660 Glycerol-3-phosphate acyltransferase F3113_RS03805 PF02152 Dihydroneopterin aldolase F3113_RS03810 PF02673 Bacitracin resistance protein BacA F3113_RS03815 PF01966 HD domain F3113_RS03815 PF01743 Poly A polymerase head domain F3113_RS03815 PF12627 Probable RNA and SrmB- binding site of polymerase A F3113_RS03820 PF08239 Bacterial SH3 domain F3113_RS03825 PF01928 CYTH domain F3113_RS03830 PF08335 GlnD PII-uridylyltransferase F3113_RS03830 PF03710 Glutamate-ammonia ligase adenylyltransferase F3113_RS03835 PF01467 Cytidylyltransferase-like F3113_RS03835 PF00294 pfkB family carbohydrate kinase F3113_RS03840 PF15975 Flotillin F3113_RS03840 PF01145 SPFH domain / Band 7 family F3113_RS03845 PF07290 Protein of unknown function (DUF1449) F3113_RS03850 PF08971 Glycogen synthesis protein F3113_RS03855 PF04380 Membrane fusogenic activity F3113_RS03860 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase F3113_RS03865 PF02600 Disulfide bond formation protein DsbB F3113_RS03870 PF01323 DSBA-like thioredoxin domain F3113_RS03875 PF05935 Arylsulfotransferase (ASST) F3113_RS03875 PF17425 Arylsulfotransferase Ig-like domain F3113_RS03880 PF02535 ZIP Zinc transporter F3113_RS03885 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3113_RS03890 PF03738 Glutathionylspermidine synthase preATP-grasp F3113_RS03895 PF06693 Protein of unknown function (DUF1190) F3113_RS03900 PF02321 Outer membrane efflux protein F3113_RS03905 PF00293 NUDIX domain F3113_RS03910 PF06853 Protein of unknown function (DUF1249) F3113_RS03915 PF00149 Calcineurin-like phosphoesterase F3113_RS03920 PF05728 Uncharacterised protein family (UPF0227) F3113_RS03925 PF00986 DNA gyrase B subunit, carboxyl terminus F3113_RS03925 PF01751 Toprim domain F3113_RS03925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS03925 PF00204 DNA gyrase B F3113_RS03930 PF12833 Helix-turn-helix domain F3113_RS03930 PF02311 AraC-like ligand binding domain F3113_RS03940 PF01306 LacY proton/sugar symporter F3113_RS03945 PF07470 Glycosyl Hydrolase Family 88 F3113_RS03950 PF03992 Antibiotic biosynthesis monooxygenase F3113_RS03955 PF02525 Flavodoxin-like fold F3113_RS03960 PF08521 Two-component sensor kinase N-terminal F3113_RS03960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS03960 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS03965 PF00486 Transcriptional regulatory protein, C terminal F3113_RS03965 PF00072 Response regulator receiver domain F3113_RS03970 PF04076 Bacterial OB fold (BOF) protein F3113_RS03975 PF03989 DNA gyrase C-terminal domain, beta-propeller F3113_RS03975 PF00521 DNA gyrase/topoisomerase IV, subunit A F3113_RS03980 PF01553 Acyltransferase F3113_RS03985 PF07732 Multicopper oxidase F3113_RS03985 PF00394 Multicopper oxidase F3113_RS03985 PF07731 Multicopper oxidase F3113_RS03990 PF02386 Cation transport protein F3113_RS03995 PF11842 Domain of unknown function (DUF3362) F3113_RS03995 PF08497 Radical SAM N-terminal F3113_RS03995 PF04055 Radical SAM superfamily F3113_RS04005 PF00939 Sodium:sulfate symporter transmembrane region F3113_RS04010 PF00248 Aldo/keto reductase family F3113_RS04015 PF00465 Iron-containing alcohol dehydrogenase F3113_RS04020 PF06719 AraC-type transcriptional regulator N-terminus F3113_RS04020 PF12833 Helix-turn-helix domain F3113_RS04025 PF09335 SNARE associated Golgi protein F3113_RS04030 PF01053 Cys/Met metabolism PLP-dependent enzyme F3113_RS04035 PF01618 MotA/TolQ/ExbB proton channel family F3113_RS04040 PF02472 Biopolymer transport protein ExbD/TolR F3113_RS04060 PF00248 Aldo/keto reductase family F3113_RS04065 PF01738 Dienelactone hydrolase family F3113_RS04070 PF02203 Tar ligand binding domain homologue F3113_RS04070 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS04070 PF00672 HAMP domain F3113_RS04075 PF11115 Protein of unknown function (DUF2623) F3113_RS04080 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3113_RS04080 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal F3113_RS04085 PF13247 4Fe-4S dicluster domain F3113_RS04090 PF03916 Polysulphide reductase, NrfD F3113_RS04095 PF00374 Nickel-dependent hydrogenase F3113_RS04100 PF01750 Hydrogenase maturation protease F3113_RS04105 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE F3113_RS04110 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F3113_RS04115 PF01455 HupF/HypC family F3113_RS04120 PF02798 Glutathione S-transferase, N-terminal domain F3113_RS04125 PF00384 Molybdopterin oxidoreductase F3113_RS04130 PF05257 CHAP domain F3113_RS04130 PF03738 Glutathionylspermidine synthase preATP-grasp F3113_RS04140 PF04474 Protein of unknown function (DUF554) F3113_RS04145 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F3113_RS04145 PF01276 Orn/Lys/Arg decarboxylase, major domain F3113_RS04145 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3113_RS04150 PF03825 Nucleoside H+ symporter F3113_RS04155 PF01464 Transglycosylase SLT domain F3113_RS04155 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F3113_RS04160 PF04362 Bacterial Fe(2+) trafficking F3113_RS04165 PF14815 NUDIX domain F3113_RS04165 PF10576 Iron-sulfur binding domain of endonuclease III F3113_RS04165 PF00730 HhH-GPD superfamily base excision DNA repair protein F3113_RS04165 PF00633 Helix-hairpin-helix motif F3113_RS04170 PF02390 Putative methyltransferase F3113_RS04175 PF04320 Protein with unknown function (DUF469) F3113_RS04180 PF11101 Protein of unknown function (DUF2884) F3113_RS04185 PF00710 Asparaginase, N-terminal F3113_RS04185 PF17763 Glutaminase/Asparaginase C-terminal domain F3113_RS04190 PF06969 HemN C-terminal domain F3113_RS04190 PF04055 Radical SAM superfamily F3113_RS04195 PF01725 Ham1 family F3113_RS04200 PF02594 Uncharacterised ACR, YggU family COG1872 F3113_RS04205 PF02325 YGGT family F3113_RS04210 PF01168 Alanine racemase, N-terminal domain F3113_RS04215 PF00437 Type II/IV secretion system protein F3113_RS04220 PF03652 Holliday junction resolvase F3113_RS04225 PF02622 Uncharacterized ACR, COG1678 F3113_RS04230 PF02951 Prokaryotic glutathione synthetase, N-terminal domain F3113_RS04230 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain F3113_RS04235 PF04452 RNA methyltransferase F3113_RS04240 PF04231 Endonuclease I F3113_RS04245 PF17283 SprT-like zinc ribbon domain F3113_RS04245 PF10263 SprT-like family F3113_RS04250 PF00083 Sugar (and other) transporter F3113_RS04255 PF02773 S-adenosylmethionine synthetase, C-terminal domain F3113_RS04255 PF02772 S-adenosylmethionine synthetase, central domain F3113_RS04255 PF00438 S-adenosylmethionine synthetase, N-terminal domain F3113_RS04260 PF17430 Uncharacterized YqgC-like F3113_RS04265 PF11036 Virulence promoting factor F3113_RS04270 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3113_RS04270 PF17810 Arginine decarboxylase helical bundle domain F3113_RS04270 PF17944 Arginine decarboxylase C-terminal helical extension F3113_RS04275 PF00491 Arginase family F3113_RS04280 PF01435 Peptidase family M48 F3113_RS04285 PF00456 Transketolase, thiamine diphosphate binding domain F3113_RS04285 PF02779 Transketolase, pyrimidine binding domain F3113_RS04285 PF02780 Transketolase, C-terminal domain F3113_RS04290 PF00005 ABC transporter F3113_RS04295 PF00005 ABC transporter F3113_RS04315 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3113_RS04315 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3113_RS04320 PF00162 Phosphoglycerate kinase F3113_RS04325 PF01116 Fructose-bisphosphate aldolase class-II F3113_RS04340 PF00145 C-5 cytosine-specific DNA methylase F3113_RS04340 PF01381 Helix-turn-helix F3113_RS04385 PF04002 RadC-like JAB domain F3113_RS04400 PF06067 Domain of unknown function (DUF932) F3113_RS04405 PF02195 ParB-like nuclease domain F3113_RS04415 PF05284 Protein of unknown function (DUF736) F3113_RS04445 PF13614 AAA domain F3113_RS04460 PF10502 Signal peptidase, peptidase S26 F3113_RS04485 PF00893 Small Multidrug Resistance protein F3113_RS04490 PF00873 AcrB/AcrD/AcrF family F3113_RS04495 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS04500 PF00440 Bacterial regulatory proteins, tetR family F3113_RS04510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS04510 PF03466 LysR substrate binding domain F3113_RS04520 PF02534 Type IV secretory system Conjugative DNA transfer F3113_RS04530 PF00437 Type II/IV secretion system protein F3113_RS04535 PF04956 TrbC/VIRB2 family F3113_RS04545 PF03135 CagE, TrbE, VirB family, component of type IV transporter system F3113_RS04560 PF04610 TrbL/VirB6 plasmid conjugal transfer protein F3113_RS04570 PF03524 Conjugal transfer protein F3113_RS04575 PF03743 Bacterial conjugation TrbI-like protein F3113_RS04585 PF00924 Mechanosensitive ion channel F3113_RS04585 PF05552 Conserved TM helix F3113_RS04590 PF01810 LysE type translocator F3113_RS04595 PF04402 Protein of unknown function (DUF541) F3113_RS04600 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS04600 PF03466 LysR substrate binding domain F3113_RS04605 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain F3113_RS04605 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain F3113_RS04610 PF00378 Enoyl-CoA hydratase/isomerase F3113_RS04620 PF02310 B12 binding domain F3113_RS04620 PF01642 Methylmalonyl-CoA mutase F3113_RS04625 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS04625 PF03466 LysR substrate binding domain F3113_RS04630 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) F3113_RS04635 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3113_RS04635 PF01842 ACT domain F3113_RS04635 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3113_RS04640 PF01812 5-formyltetrahydrofolate cyclo-ligase family F3113_RS04650 PF05164 Cell division protein ZapA F3113_RS04655 PF03695 Uncharacterised protein family (UPF0149) F3113_RS04660 PF05195 Aminopeptidase P, N-terminal domain F3113_RS04660 PF00557 Metallopeptidase family M24 F3113_RS04665 PF01494 FAD binding domain F3113_RS04670 PF01494 FAD binding domain F3113_RS04675 PF08669 Glycine cleavage T-protein C-terminal barrel domain F3113_RS04675 PF01571 Aminomethyltransferase folate-binding domain F3113_RS04680 PF01597 Glycine cleavage H-protein F3113_RS04685 PF02347 Glycine cleavage system P-protein F3113_RS04695 PF00232 Glycosyl hydrolase family 1 F3113_RS04700 PF01380 SIS domain F3113_RS04700 PF01418 Helix-turn-helix domain, rpiR family F3113_RS04705 PF04266 ASCH domain F3113_RS04710 PF03006 Haemolysin-III related F3113_RS04715 PF01571 Aminomethyltransferase folate-binding domain F3113_RS04720 PF03937 Flavinator of succinate dehydrogenase F3113_RS04725 PF07254 Membrane-bound toxin component of toxin-antitoxin system F3113_RS04730 PF00258 Flavodoxin F3113_RS04735 PF00589 Phage integrase family F3113_RS04735 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS04740 PF13098 Thioredoxin-like domain F3113_RS04740 PF10411 Disulfide bond isomerase protein N-terminus F3113_RS04745 PF02272 DHHA1 domain F3113_RS04745 PF17768 RecJ OB domain F3113_RS04745 PF01368 DHH family F3113_RS04755 PF01336 OB-fold nucleic acid binding domain F3113_RS04755 PF00152 tRNA synthetases class II (D, K and N) F3113_RS04760 PF00293 NUDIX domain F3113_RS04765 PF01551 Peptidase family M23 F3113_RS04765 PF01476 LysM domain F3113_RS04880 PF01522 Polysaccharide deacetylase F3113_RS04880 PF14883 Hypothetical glycosyl hydrolase family 13 F3113_RS04885 PF00535 Glycosyl transferase family 2 F3113_RS04895 PF06902 Divergent 4Fe-4S mono-cluster F3113_RS04900 PF14542 GCN5-related N-acetyl-transferase F3113_RS04905 PF03466 LysR substrate binding domain F3113_RS04905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS04910 PF12796 Ankyrin repeats (3 copies) F3113_RS04915 PF11392 Protein of unknown function (DUF2877) F3113_RS04920 PF00549 CoA-ligase F3113_RS04920 PF02629 CoA binding domain F3113_RS04925 PF06545 Protein of unknown function (DUF1116) F3113_RS04935 PF00696 Amino acid kinase family F3113_RS04940 PF07969 Amidohydrolase family F3113_RS04945 PF03824 High-affinity nickel-transport protein F3113_RS04950 PF02583 Metal-sensitive transcriptional repressor F3113_RS04955 PF03222 Tryptophan/tyrosine permease family F3113_RS04965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS04965 PF03466 LysR substrate binding domain F3113_RS04970 PF02803 Thiolase, C-terminal domain F3113_RS04970 PF00108 Thiolase, N-terminal domain F3113_RS04975 PF04962 KduI/IolB family F3113_RS04985 PF00083 Sugar (and other) transporter F3113_RS04990 PF04754 Putative transposase, YhgA-like F3113_RS05000 PF01177 Asp/Glu/Hydantoin racemase F3113_RS05005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS05005 PF03466 LysR substrate binding domain F3113_RS05010 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain F3113_RS05010 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain F3113_RS05015 PF00356 Bacterial regulatory proteins, lacI family F3113_RS05020 PF00356 Bacterial regulatory proteins, lacI family F3113_RS05025 PF00501 AMP-binding enzyme F3113_RS05025 PF01553 Acyltransferase F3113_RS05030 PF07690 Major Facilitator Superfamily F3113_RS05035 PF00248 Aldo/keto reductase family F3113_RS05040 PF06004 Bacterial protein of unknown function (DUF903) F3113_RS05045 PF03741 Integral membrane protein TerC family F3113_RS05050 PF02976 DNA mismatch repair enzyme MutH F3113_RS05055 PF00293 NUDIX domain F3113_RS05060 PF01590 GAF domain F3113_RS05060 PF02896 PEP-utilising enzyme, TIM barrel domain F3113_RS05060 PF05524 PEP-utilising enzyme, N-terminal F3113_RS05060 PF00391 PEP-utilising enzyme, mobile domain F3113_RS05065 PF01790 Prolipoprotein diacylglyceryl transferase F3113_RS05070 PF00303 Thymidylate synthase F3113_RS05075 PF07963 Prokaryotic N-terminal methylation motif F3113_RS05080 PF07963 Prokaryotic N-terminal methylation motif F3113_RS05085 PF10713 Protein of unknown function (DUF2509) F3113_RS05090 PF07963 Prokaryotic N-terminal methylation motif F3113_RS05090 PF12528 Type II secretion prepilin peptidase dependent protein C F3113_RS05095 PF17946 RecC C-terminal domain F3113_RS05100 PF05193 Peptidase M16 inactive domain F3113_RS05100 PF00675 Insulinase (Peptidase family M16) F3113_RS05100 PF16187 Middle or third domain of peptidase_M16 F3113_RS05105 PF12705 PD-(D/E)XK nuclease superfamily F3113_RS05105 PF00580 UvrD/REP helicase N-terminal domain F3113_RS05105 PF13361 UvrD-like helicase C-terminal domain F3113_RS05110 PF13538 UvrD-like helicase C-terminal domain F3113_RS05115 PF00583 Acetyltransferase (GNAT) family F3113_RS05115 PF00696 Amino acid kinase family F3113_RS05120 PF11741 AMIN domain F3113_RS05120 PF01520 N-acetylmuramoyl-L-alanine amidase F3113_RS05145 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS05145 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS05150 PF13953 PapC C-terminal domain F3113_RS05150 PF13954 PapC N-terminal domain F3113_RS05150 PF00577 Outer membrane usher protein F3113_RS05175 PF03562 MltA specific insert domain F3113_RS05175 PF06725 3D domain F3113_RS05180 PF00899 ThiF family F3113_RS05185 PF02657 Fe-S metabolism associated domain F3113_RS05190 PF00266 Aminotransferase class-V F3113_RS05195 PF06004 Bacterial protein of unknown function (DUF903) F3113_RS05200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS05200 PF03466 LysR substrate binding domain F3113_RS05205 PF04241 Protein of unknown function (DUF423) F3113_RS05210 PF18125 RlmM ferredoxin-like domain F3113_RS05210 PF01728 FtsJ-like methyltransferase F3113_RS05215 PF08220 DeoR-like helix-turn-helix domain F3113_RS05215 PF00455 DeoR C terminal sensor domain F3113_RS05220 PF05025 RbsD / FucU transport protein family F3113_RS05225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS05225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS05230 PF02952 L-fucose isomerase, C-terminal domain F3113_RS05230 PF07881 L-fucose isomerase, first N-terminal domain F3113_RS05230 PF07882 L-fucose isomerase, second N-terminal domain F3113_RS05235 PF00005 ABC transporter F3113_RS05240 PF02653 Branched-chain amino acid transport system / permease component F3113_RS05250 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS05250 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS05255 PF00356 Bacterial regulatory proteins, lacI family F3113_RS05260 PF00596 Class II Aldolase and Adducin N-terminal domain F3113_RS05265 PF00465 Iron-containing alcohol dehydrogenase F3113_RS05270 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3113_RS05270 PF01367 5'-3' exonuclease, C-terminal SAM fold F3113_RS05275 PF03315 Serine dehydratase beta chain F3113_RS05275 PF03313 Serine dehydratase alpha chain F3113_RS05285 PF03641 Possible lysine decarboxylase F3113_RS05285 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases F3113_RS05285 PF11892 Domain of unknown function (DUF3412) F3113_RS05290 PF14489 QueF-like protein F3113_RS05290 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term F3113_RS05295 PF07348 Syd protein (SUKH-2) F3113_RS05300 PF04287 tRNA pseudouridine synthase C F3113_RS05305 PF00849 RNA pseudouridylate synthase F3113_RS05310 PF00258 Flavodoxin F3113_RS05315 PF07690 Major Facilitator Superfamily F3113_RS05320 PF13378 Enolase C-terminal domain-like F3113_RS05320 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3113_RS05325 PF13378 Enolase C-terminal domain-like F3113_RS05330 PF02595 Glycerate kinase family F3113_RS05335 PF01627 Hpt domain F3113_RS05335 PF00072 Response regulator receiver domain F3113_RS05335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS05335 PF00672 HAMP domain F3113_RS05335 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS05335 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) F3113_RS05340 PF05958 tRNA (Uracil-5-)-methyltransferase F3113_RS05340 PF01938 TRAM domain F3113_RS05345 PF04607 Region found in RelA / SpoT proteins F3113_RS05345 PF13291 ACT domain F3113_RS05345 PF02824 TGS domain F3113_RS05350 PF03819 MazG nucleotide pyrophosphohydrolase domain F3113_RS05355 PF06418 CTP synthase N-terminus F3113_RS05355 PF00117 Glutamine amidotransferase class-I F3113_RS05360 PF03952 Enolase, N-terminal domain F3113_RS05360 PF00113 Enolase, C-terminal TIM barrel domain F3113_RS05365 PF01418 Helix-turn-helix domain, rpiR family F3113_RS05365 PF01380 SIS domain F3113_RS05370 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3113_RS05370 PF00367 phosphotransferase system, EIIB F3113_RS05370 PF02378 Phosphotransferase system, EIIC F3113_RS05375 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase F3113_RS05380 PF04055 Radical SAM superfamily F3113_RS05385 PF01242 6-pyruvoyl tetrahydropterin synthase F3113_RS05390 PF00258 Flavodoxin F3113_RS05390 PF00175 Oxidoreductase NAD-binding domain F3113_RS05390 PF00667 FAD binding domain F3113_RS05395 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain F3113_RS05395 PF01077 Nitrite and sulphite reductase 4Fe-4S domain F3113_RS05400 PF01507 Phosphoadenosine phosphosulfate reductase family F3113_RS05405 PF04389 Peptidase family M28 F3113_RS05410 PF01507 Phosphoadenosine phosphosulfate reductase family F3113_RS05415 PF00009 Elongation factor Tu GTP binding domain F3113_RS05425 PF12084 Protein of unknown function (DUF3561) F3113_RS05430 PF04977 Septum formation initiator F3113_RS05435 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase F3113_RS05440 PF02542 YgbB family F3113_RS05445 PF01142 tRNA pseudouridine synthase D (TruD) F3113_RS05450 PF01975 Survival protein SurE F3113_RS05460 PF01476 LysM domain F3113_RS05460 PF01551 Peptidase family M23 F3113_RS05465 PF04542 Sigma-70 region 2 F3113_RS05465 PF00140 Sigma-70 factor, region 1.2 F3113_RS05465 PF04545 Sigma-70, region 4 F3113_RS05465 PF04539 Sigma-70 region 3 F3113_RS05470 PF01047 MarR family F3113_RS05475 PF02441 Flavoprotein F3113_RS05480 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F3113_RS05490 PF01848 Hok/gef family F3113_RS05495 PF01624 MutS domain I F3113_RS05495 PF05188 MutS domain II F3113_RS05495 PF05192 MutS domain III F3113_RS05495 PF05190 MutS family domain IV F3113_RS05495 PF00488 MutS domain V F3113_RS05505 PF01594 AI-2E family transporter F3113_RS05510 PF00873 AcrB/AcrD/AcrF family F3113_RS05515 PF13533 Biotin-lipoyl like F3113_RS05525 PF00072 Response regulator receiver domain F3113_RS05525 PF00486 Transcriptional regulatory protein, C terminal F3113_RS05530 PF13187 4Fe-4S dicluster domain F3113_RS05530 PF04055 Radical SAM superfamily F3113_RS05535 PF01228 Glycine radical F3113_RS05535 PF02901 Pyruvate formate lyase-like F3113_RS05540 PF00893 Small Multidrug Resistance protein F3113_RS05545 PF00893 Small Multidrug Resistance protein F3113_RS05550 PF00950 ABC 3 transport family F3113_RS05555 PF00950 ABC 3 transport family F3113_RS05560 PF00005 ABC transporter F3113_RS05565 PF01297 Zinc-uptake complex component A periplasmic F3113_RS05570 PF11756 Nitrous oxide-stimulated promoter F3113_RS05575 PF01590 GAF domain F3113_RS05575 PF00158 Sigma-54 interaction domain F3113_RS05575 PF02954 Bacterial regulatory protein, Fis family F3113_RS05580 PF02769 AIR synthase related protein, C-terminal domain F3113_RS05580 PF00586 AIR synthase related protein, N-terminal domain F3113_RS05585 PF01924 Hydrogenase formation hypA family F3113_RS05590 PF01455 HupF/HypC family F3113_RS05595 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3113_RS05600 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA F3113_RS05605 PF11046 Transcriptional repressor of hyc and hyp operons F3113_RS05610 PF13247 4Fe-4S dicluster domain F3113_RS05615 PF00361 Proton-conducting membrane transporter F3113_RS05620 PF00146 NADH dehydrogenase F3113_RS05625 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F3113_RS05625 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F3113_RS05625 PF00374 Nickel-dependent hydrogenase F3113_RS05630 PF12838 4Fe-4S dicluster domain F3113_RS05635 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3113_RS05640 PF07450 Formate hydrogenlyase maturation protein HycH F3113_RS05645 PF01750 Hydrogenase maturation protease F3113_RS05650 PF08845 Toxin SymE, type I toxin-antitoxin system F3113_RS05655 PF00232 Glycosyl hydrolase family 1 F3113_RS05665 PF00356 Bacterial regulatory proteins, lacI family F3113_RS05670 PF13247 4Fe-4S dicluster domain F3113_RS05670 PF12800 4Fe-4S binding domain F3113_RS05675 PF01300 Telomere recombination F3113_RS05675 PF00708 Acylphosphatase F3113_RS05675 PF07503 HypF finger F3113_RS05675 PF17788 HypF Kae1-like domain F3113_RS05680 PF18113 Rubredoxin binding C-terminal domain F3113_RS05680 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS05685 PF00301 Rubredoxin F3113_RS05685 PF00753 Metallo-beta-lactamase superfamily F3113_RS05685 PF00258 Flavodoxin F3113_RS05690 PF01590 GAF domain F3113_RS05690 PF00158 Sigma-54 interaction domain F3113_RS05695 PF00571 CBS domain F3113_RS05695 PF01380 SIS domain F3113_RS05700 PF08220 DeoR-like helix-turn-helix domain F3113_RS05700 PF00455 DeoR C terminal sensor domain F3113_RS05705 PF06923 Glucitol operon activator protein (GutM) F3113_RS05710 PF00106 short chain dehydrogenase F3113_RS05715 PF03829 PTS system glucitol/sorbitol-specific IIA component F3113_RS05720 PF07663 Sorbitol phosphotransferase enzyme II C-terminus F3113_RS05720 PF03612 Sorbitol phosphotransferase enzyme II N-terminus F3113_RS05725 PF03608 PTS system enzyme II sorbitol-specific factor F3113_RS05730 PF13406 Transglycosylase SLT domain F3113_RS05735 PF02464 Competence-damaged protein F3113_RS05740 PF00154 recA bacterial DNA recombination protein F3113_RS05745 PF02631 RecX family F3113_RS05750 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3113_RS05750 PF01411 tRNA synthetases class II (A) F3113_RS05750 PF02272 DHHA1 domain F3113_RS05755 PF02599 Global regulator protein family F3113_RS05780 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS05785 PF09335 SNARE associated Golgi protein F3113_RS05790 PF04262 Glutamate-cysteine ligase F3113_RS05795 PF02664 S-Ribosylhomocysteinase (LuxS) F3113_RS05805 PF07690 Major Facilitator Superfamily F3113_RS05810 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS05810 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS05815 PF01047 MarR family F3113_RS05820 PF05437 Branched-chain amino acid transport protein (AzlD) F3113_RS05825 PF03591 AzlC protein F3113_RS05830 PF07690 Major Facilitator Superfamily F3113_RS05835 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3113_RS05840 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS05845 PF00571 CBS domain F3113_RS05845 PF00005 ABC transporter F3113_RS05850 PF00268 Ribonucleotide reductase, small chain F3113_RS05855 PF00317 Ribonucleotide reductase, all-alpha domain F3113_RS05855 PF08343 Ribonucleotide reductase N-terminal F3113_RS05855 PF02867 Ribonucleotide reductase, barrel domain F3113_RS05860 PF07972 NrdI Flavodoxin like F3113_RS05865 PF00462 Glutaredoxin F3113_RS05870 PF02627 Carboxymuconolactone decarboxylase family F3113_RS05875 PF00155 Aminotransferase class I and II F3113_RS05875 PF00392 Bacterial regulatory proteins, gntR family F3113_RS05880 PF09400 Protein of unknown function (DUF2002) F3113_RS05885 PF06610 L-alanine exporter F3113_RS05890 PF00816 H-NS histone family F3113_RS05900 PF11127 Protein of unknown function (DUF2892) F3113_RS05900 PF00581 Rhodanese-like domain F3113_RS05905 PF01022 Bacterial regulatory protein, arsR family F3113_RS05910 PF01679 Proteolipid membrane potential modulator F3113_RS05915 PF04972 BON domain F3113_RS05915 PF01476 LysM domain F3113_RS05920 PF00392 Bacterial regulatory proteins, gntR family F3113_RS05920 PF07729 FCD domain F3113_RS05925 PF00324 Amino acid permease F3113_RS05930 PF00202 Aminotransferase class-III F3113_RS05935 PF00171 Aldehyde dehydrogenase family F3113_RS05940 PF01266 FAD dependent oxidoreductase F3113_RS05945 PF08943 CsiD F3113_RS05950 PF02308 MgtC family F3113_RS05955 PF03825 Nucleoside H+ symporter F3113_RS05965 PF00356 Bacterial regulatory proteins, lacI family F3113_RS05975 PF03466 LysR substrate binding domain F3113_RS05975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS05980 PF01970 Tripartite tricarboxylate transporter TctA family F3113_RS05995 PF00072 Response regulator receiver domain F3113_RS05995 PF00486 Transcriptional regulatory protein, C terminal F3113_RS06000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS06000 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS06010 PF13953 PapC C-terminal domain F3113_RS06010 PF00577 Outer membrane usher protein F3113_RS06010 PF13954 PapC N-terminal domain F3113_RS06015 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS06015 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS06025 PF02397 Bacterial sugar transferase F3113_RS06060 PF00534 Glycosyl transferases group 1 F3113_RS06065 PF13439 Glycosyltransferase Family 4 F3113_RS06065 PF00534 Glycosyl transferases group 1 F3113_RS06080 PF16363 GDP-mannose 4,6 dehydratase F3113_RS06090 PF00484 Carbonic anhydrase F3113_RS06100 PF02954 Bacterial regulatory protein, Fis family F3113_RS06100 PF00158 Sigma-54 interaction domain F3113_RS06100 PF13188 PAS domain F3113_RS06105 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS06110 PF01546 Peptidase family M20/M25/M40 F3113_RS06110 PF07687 Peptidase dimerisation domain F3113_RS06115 PF07969 Amidohydrolase family F3113_RS06120 PF07690 Major Facilitator Superfamily F3113_RS06125 PF00196 Bacterial regulatory proteins, luxR family F3113_RS06125 PF00072 Response regulator receiver domain F3113_RS06130 PF01627 Hpt domain F3113_RS06130 PF00072 Response regulator receiver domain F3113_RS06130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS06130 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS06130 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS06135 PF10938 YfdX protein F3113_RS06150 PF00873 AcrB/AcrD/AcrF family F3113_RS06155 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS06155 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS06160 PF03843 Outer membrane lipoprotein Slp family F3113_RS06170 PF00171 Aldehyde dehydrogenase family F3113_RS06175 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS06175 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS06175 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS06180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3113_RS06180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS06185 PF13407 Periplasmic binding protein domain F3113_RS06190 PF00005 ABC transporter F3113_RS06195 PF02653 Branched-chain amino acid transport system / permease component F3113_RS06200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS06200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3113_RS06205 PF00294 pfkB family carbohydrate kinase F3113_RS06210 PF01261 Xylose isomerase-like TIM barrel F3113_RS06215 PF04962 KduI/IolB family F3113_RS06220 PF03797 Autotransporter beta-domain F3113_RS06225 PF11924 Inverse autotransporter, beta-domain F3113_RS06225 PF02369 Bacterial Ig-like domain (group 1) F3113_RS06225 PF09134 Invasin, domain 3 F3113_RS06250 PF17345 Family of unknown function (DUF5375) F3113_RS06300 PF13356 Arm DNA-binding domain F3113_RS06300 PF00589 Phage integrase family F3113_RS06310 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS06310 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS06315 PF00664 ABC transporter transmembrane region F3113_RS06315 PF00005 ABC transporter F3113_RS06330 PF01668 SmpB protein F3113_RS06335 PF03364 Polyketide cyclase / dehydrase and lipid transport F3113_RS06340 PF03658 RnfH family Ubiquitin F3113_RS06345 PF04355 SmpA / OmlA family F3113_RS06350 PF02463 RecF/RecN/SMC N terminal domain F3113_RS06355 PF01513 ATP-NAD kinase F3113_RS06360 PF01025 GrpE F3113_RS06365 PF03471 Transporter associated domain F3113_RS06365 PF00571 CBS domain F3113_RS06365 PF01595 Cyclin M transmembrane N-terminal domain F3113_RS06370 PF01578 Cytochrome C assembly protein F3113_RS06375 PF00448 SRP54-type protein, GTPase domain F3113_RS06375 PF02978 Signal peptide binding domain F3113_RS06375 PF02881 SRP54-type protein, helical bundle domain F3113_RS06380 PF00886 Ribosomal protein S16 F3113_RS06385 PF01782 RimM N-terminal domain F3113_RS06385 PF05239 PRC-barrel domain F3113_RS06390 PF01746 tRNA (Guanine-1)-methyltransferase F3113_RS06395 PF01245 Ribosomal protein L19 F3113_RS06400 PF00691 OmpA family F3113_RS06405 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS06405 PF17152 Periplasmic sensor domain F3113_RS06410 PF13689 YfiR/HmsC-like F3113_RS06415 PF10973 Protein of unknown function (DUF2799) F3113_RS06420 PF00793 DAHP synthetase I family F3113_RS06425 PF02153 Prephenate dehydrogenase F3113_RS06425 PF01817 Chorismate mutase type II F3113_RS06430 PF01817 Chorismate mutase type II F3113_RS06430 PF00800 Prephenate dehydratase F3113_RS06440 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein F3113_RS06445 PF13525 Outer membrane lipoprotein F3113_RS06450 PF01479 S4 domain F3113_RS06450 PF00849 RNA pseudouridylate synthase F3113_RS06455 PF02578 Multi-copper polyphenol oxidoreductase laccase F3113_RS06460 PF02861 Clp amino terminal domain, pathogenicity island component F3113_RS06460 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS06460 PF07724 AAA domain (Cdc48 subfamily) F3113_RS06460 PF17871 AAA lid domain F3113_RS06460 PF10431 C-terminal, D2-small domain, of ClpB protein F3113_RS06485 PF00083 Sugar (and other) transporter F3113_RS06490 PF10043 Predicted periplasmic lipoprotein (DUF2279) F3113_RS06495 PF13091 PLD-like domain F3113_RS06500 PF00583 Acetyltransferase (GNAT) family F3113_RS06500 PF13380 CoA binding domain F3113_RS06500 PF13607 Succinyl-CoA ligase like flavodoxin domain F3113_RS06505 PF03942 DTW domain F3113_RS06510 PF00085 Thioredoxin F3113_RS06515 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3113_RS06515 PF00588 SpoU rRNA Methylase family F3113_RS06520 PF03167 Uracil DNA glycosylase superfamily F3113_RS06525 PF01228 Glycine radical F3113_RS06540 PF00271 Helicase conserved C-terminal domain F3113_RS06540 PF00270 DEAD/DEAH box helicase F3113_RS06545 PF05175 Methyltransferase small domain F3113_RS06550 PF00890 FAD binding domain F3113_RS06550 PF02910 Fumarate reductase flavoprotein C-term F3113_RS06560 PF04542 Sigma-70 region 2 F3113_RS06560 PF08281 Sigma-70, region 4 F3113_RS06565 PF03872 Anti sigma-E protein RseA, N-terminal domain F3113_RS06565 PF03873 Anti sigma-E protein RseA, C-terminal domain F3113_RS06570 PF03888 MucB/RseB N-terminal domain F3113_RS06570 PF17188 MucB/RseB C-terminal domain F3113_RS06580 PF06421 GTP-binding protein LepA C-terminus F3113_RS06580 PF00009 Elongation factor Tu GTP binding domain F3113_RS06580 PF00679 Elongation factor G C-terminus F3113_RS06580 PF03144 Elongation factor Tu domain 2 F3113_RS06585 PF10502 Signal peptidase, peptidase S26 F3113_RS06590 PF14622 Ribonuclease-III-like F3113_RS06590 PF00035 Double-stranded RNA binding motif F3113_RS06595 PF01926 50S ribosome-binding GTPase F3113_RS06595 PF07650 KH domain F3113_RS06600 PF11967 Recombination protein O N terminal F3113_RS06600 PF02565 Recombination protein O C terminal F3113_RS06605 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ F3113_RS06610 PF01648 4'-phosphopantetheinyl transferase superfamily F3113_RS06615 PF12838 4Fe-4S dicluster domain F3113_RS06620 PF01380 SIS domain F3113_RS06620 PF01418 Helix-turn-helix domain, rpiR family F3113_RS06625 PF01380 SIS domain F3113_RS06630 PF02378 Phosphotransferase system, EIIC F3113_RS06630 PF00367 phosphotransferase system, EIIB F3113_RS06640 PF14437 MafB19-like deaminase F3113_RS06645 PF01464 Transglycosylase SLT domain F3113_RS06645 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS06650 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain F3113_RS06650 PF02769 AIR synthase related protein, C-terminal domain F3113_RS06650 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal F3113_RS06655 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS06655 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS06660 PF13942 YfhG lipoprotein F3113_RS06665 PF00158 Sigma-54 interaction domain F3113_RS06665 PF00072 Response regulator receiver domain F3113_RS06670 PF00543 Nitrogen regulatory protein P-II F3113_RS06675 PF00042 Globin F3113_RS06675 PF00970 Oxidoreductase FAD-binding domain F3113_RS06675 PF00175 Oxidoreductase NAD-binding domain F3113_RS06680 PF00464 Serine hydroxymethyltransferase F3113_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS06685 PF14759 Reductase C-terminal F3113_RS06690 PF00106 short chain dehydrogenase F3113_RS06695 PF00355 Rieske [2Fe-2S] domain F3113_RS06700 PF00866 Ring hydroxylating beta subunit F3113_RS06705 PF00848 Ring hydroxylating alpha subunit (catalytic domain) F3113_RS06705 PF00355 Rieske [2Fe-2S] domain F3113_RS06710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS06710 PF03466 LysR substrate binding domain F3113_RS06715 PF00480 ROK family F3113_RS06720 PF13181 Tetratricopeptide repeat F3113_RS06720 PF17128 Domain of unknown function (DUF5107) F3113_RS06725 PF00083 Sugar (and other) transporter F3113_RS06735 PF12832 MFS_1 like family F3113_RS06740 PF00874 PRD domain F3113_RS06745 PF00571 CBS domain F3113_RS06745 PF01380 SIS domain F3113_RS06750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS06750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS06755 PF02653 Branched-chain amino acid transport system / permease component F3113_RS06760 PF02653 Branched-chain amino acid transport system / permease component F3113_RS06765 PF00005 ABC transporter F3113_RS06775 PF06226 Protein of unknown function (DUF1007) F3113_RS06780 PF03824 High-affinity nickel-transport protein F3113_RS06785 PF00459 Inositol monophosphatase family F3113_RS06790 PF00588 SpoU rRNA Methylase family F3113_RS06795 PF02082 Transcriptional regulator F3113_RS06800 PF00266 Aminotransferase class-V F3113_RS06805 PF01592 NifU-like N terminal domain F3113_RS06810 PF01521 Iron-sulphur cluster biosynthesis F3113_RS06815 PF07743 HSCB C-terminal oligomerisation domain F3113_RS06820 PF00012 Hsp70 protein F3113_RS06825 PF00111 2Fe-2S iron-sulfur cluster binding domain F3113_RS06830 PF04384 Iron-sulphur cluster assembly F3113_RS06835 PF12404 Peptidase F3113_RS06835 PF00883 Cytosol aminopeptidase family, catalytic domain F3113_RS06840 PF07179 SseB protein N-terminal domain F3113_RS06840 PF14581 SseB protein C-terminal domain F3113_RS06845 PF00581 Rhodanese-like domain F3113_RS06850 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain F3113_RS06850 PF17962 Bacterial macroglobulin domain 6 F3113_RS06850 PF07703 Alpha-2-macroglobulin bait region domain F3113_RS06850 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain F3113_RS06850 PF07678 A-macroglobulin TED domain F3113_RS06850 PF01835 MG2 domain F3113_RS06850 PF00207 Alpha-2-macroglobulin family F3113_RS06850 PF11974 Bacterial alpha-2-macroglobulin MG3 domain F3113_RS06850 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain F3113_RS06855 PF00912 Transglycosylase F3113_RS06855 PF06832 Penicillin-Binding Protein C-terminus Family F3113_RS06855 PF00905 Penicillin binding protein transpeptidase domain F3113_RS06860 PF00334 Nucleoside diphosphate kinase F3113_RS06865 PF04055 Radical SAM superfamily F3113_RS06870 PF13464 Domain of unknown function (DUF4115) F3113_RS06875 PF04551 GcpE protein F3113_RS06880 PF03129 Anticodon binding domain F3113_RS06880 PF13393 Histidyl-tRNA synthetase F3113_RS06885 PF09976 Tetratricopeptide repeat-like domain F3113_RS06890 PF13360 PQQ-like domain F3113_RS06895 PF01926 50S ribosome-binding GTPase F3113_RS06895 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal F3113_RS06900 PF00854 POT family F3113_RS06910 PF07191 zinc-ribbons F3113_RS06915 PF02368 Bacterial Ig-like domain (group 2) F3113_RS06915 PF07979 Intimin C-type lectin domain F3113_RS06915 PF02369 Bacterial Ig-like domain (group 1) F3113_RS06915 PF11924 Inverse autotransporter, beta-domain F3113_RS06915 PF01476 LysM domain F3113_RS06930 PF02601 Exonuclease VII, large subunit F3113_RS06930 PF13742 OB-fold nucleic acid binding domain F3113_RS06935 PF00571 CBS domain F3113_RS06935 PF00478 IMP dehydrogenase / GMP reductase domain F3113_RS06940 PF00117 Glutamine amidotransferase class-I F3113_RS06940 PF00958 GMP synthase C terminal domain F3113_RS06940 PF02540 NAD synthase F3113_RS06960 PF05552 Conserved TM helix F3113_RS06960 PF00924 Mechanosensitive ion channel F3113_RS06965 PF11119 Protein of unknown function (DUF2633) F3113_RS06970 PF00563 EAL domain F3113_RS06970 PF05231 MASE1 F3113_RS06975 PF02541 Ppx/GppA phosphatase family F3113_RS06980 PF13090 Polyphosphate kinase C-terminal domain 2 F3113_RS06980 PF13089 Polyphosphate kinase N-terminal domain F3113_RS06980 PF02503 Polyphosphate kinase middle domain F3113_RS06980 PF17941 Polyphosphate kinase C-terminal domain 1 F3113_RS06985 PF00551 Formyl transferase F3113_RS06990 PF00586 AIR synthase related protein, N-terminal domain F3113_RS06990 PF02769 AIR synthase related protein, C-terminal domain F3113_RS06995 PF00232 Glycosyl hydrolase family 1 F3113_RS07005 PF00860 Permease family F3113_RS07010 PF00308 Bacterial dnaA protein F3113_RS07015 PF03960 ArsC family F3113_RS07020 PF01435 Peptidase family M48 F3113_RS07025 PF01594 AI-2E family transporter F3113_RS07030 PF07670 Nucleoside recognition F3113_RS07035 PF07670 Nucleoside recognition F3113_RS07040 PF01609 Transposase DDE domain F3113_RS07045 PF01979 Amidohydrolase family F3113_RS07050 PF00578 AhpC/TSA family F3113_RS07055 PF01842 ACT domain F3113_RS07060 PF00701 Dihydrodipicolinate synthetase family F3113_RS07065 PF06804 NlpB/DapX lipoprotein F3113_RS07070 PF01259 SAICAR synthetase F3113_RS07075 PF04228 Putative neutral zinc metallopeptidase F3113_RS07080 PF17176 tRNA-binding domain F3113_RS07080 PF05127 Helicase F3113_RS07080 PF08351 Domain of unknown function (DUF1726) F3113_RS07080 PF13718 GNAT acetyltransferase 2 F3113_RS07085 PF02230 Phospholipase/Carboxylesterase F3113_RS07090 PF13980 Uncharacterised protein family (UPF0370) F3113_RS07095 PF07687 Peptidase dimerisation domain F3113_RS07095 PF01546 Peptidase family M20/M25/M40 F3113_RS07100 PF03960 ArsC family F3113_RS07110 PF00873 AcrB/AcrD/AcrF family F3113_RS07115 PF00672 HAMP domain F3113_RS07115 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F3113_RS07115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS07115 PF07730 Histidine kinase F3113_RS07120 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS07120 PF13247 4Fe-4S dicluster domain F3113_RS07120 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3113_RS07125 PF00293 NUDIX domain F3113_RS07130 PF06674 Protein of unknown function (DUF1176) F3113_RS07135 PF02779 Transketolase, pyrimidine binding domain F3113_RS07135 PF00456 Transketolase, thiamine diphosphate binding domain F3113_RS07135 PF02780 Transketolase, C-terminal domain F3113_RS07140 PF01515 Phosphate acetyl/butaryl transferase F3113_RS07140 PF00390 Malic enzyme, N-terminal domain F3113_RS07140 PF03949 Malic enzyme, NAD binding domain F3113_RS07145 PF00936 BMC domain F3113_RS07150 PF10662 Ethanolamine utilisation - propanediol utilisation F3113_RS07155 PF06249 Ethanolamine utilisation protein EutQ F3113_RS07160 PF01923 Cobalamin adenosyltransferase F3113_RS07165 PF01515 Phosphate acetyl/butaryl transferase F3113_RS07170 PF00936 BMC domain F3113_RS07175 PF03319 Ethanolamine utilisation protein EutN/carboxysome F3113_RS07180 PF00171 Aldehyde dehydrogenase family F3113_RS07190 PF00465 Iron-containing alcohol dehydrogenase F3113_RS07195 PF04346 Ethanolamine utilisation protein, EutH F3113_RS07200 PF06277 Ethanolamine utilisation protein EutA F3113_RS07205 PF06751 Ethanolamine ammonia lyase large subunit (EutB) F3113_RS07210 PF05985 Ethanolamine ammonia-lyase light chain (EutC) F3113_RS07215 PF00936 BMC domain F3113_RS07220 PF00936 BMC domain F3113_RS07220 PF16365 Ethanolamine utilization protein EutK C-terminus F3113_RS07225 PF12833 Helix-turn-helix domain F3113_RS07230 PF01218 Coproporphyrinogen III oxidase F3113_RS07235 PF01520 N-acetylmuramoyl-L-alanine amidase F3113_RS07240 PF00583 Acetyltransferase (GNAT) family F3113_RS07245 PF11143 Protein of unknown function (DUF2919) F3113_RS07250 PF06572 Protein of unknown function (DUF1131) F3113_RS07255 PF04261 Dyp-type peroxidase family F3113_RS07270 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS07275 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS07280 PF00005 ABC transporter F3113_RS07285 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS07290 PF00117 Glutamine amidotransferase class-I F3113_RS07295 PF00155 Aminotransferase class I and II F3113_RS07295 PF00392 Bacterial regulatory proteins, gntR family F3113_RS07300 PF08543 Phosphomethylpyrimidine kinase F3113_RS07310 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3113_RS07315 PF02896 PEP-utilising enzyme, TIM barrel domain F3113_RS07315 PF05524 PEP-utilising enzyme, N-terminal F3113_RS07315 PF00391 PEP-utilising enzyme, mobile domain F3113_RS07320 PF00381 PTS HPr component phosphorylation site F3113_RS07325 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS07335 PF04354 ZipA, C-terminal FtsZ-binding domain F3113_RS07340 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F3113_RS07340 PF03120 NAD-dependent DNA ligase OB-fold domain F3113_RS07340 PF01653 NAD-dependent DNA ligase adenylation domain F3113_RS07340 PF00533 BRCA1 C Terminus (BRCT) domain F3113_RS07340 PF12826 Helix-hairpin-helix motif F3113_RS07345 PF12843 Putative quorum-sensing-regulated virulence factor F3113_RS07350 PF13593 SBF-like CPA transporter family (DUF4137) F3113_RS07355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS07355 PF03466 LysR substrate binding domain F3113_RS07360 PF03502 Nucleoside-specific channel-forming protein, Tsx F3113_RS07365 PF01048 Phosphorylase superfamily F3113_RS07370 PF03825 Nucleoside H+ symporter F3113_RS07380 PF03466 LysR substrate binding domain F3113_RS07380 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS07400 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3113_RS07405 PF07037 Putative transcription regulator (DUF1323) F3113_RS07410 PF07037 Putative transcription regulator (DUF1323) F3113_RS07425 PF07662 Na+ dependent nucleoside transporter C-terminus F3113_RS07425 PF07670 Nucleoside recognition F3113_RS07425 PF01773 Na+ dependent nucleoside transporter N-terminus F3113_RS07430 PF01566 Natural resistance-associated macrophage protein F3113_RS07435 PF10697 Protein of unknown function (DUF2502) F3113_RS07440 PF00248 Aldo/keto reductase family F3113_RS07445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS07445 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS07445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS07450 PF00654 Voltage gated chloride channel F3113_RS07455 PF02685 Glucokinase F3113_RS07460 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS07465 PF02378 Phosphotransferase system, EIIC F3113_RS07470 PF00557 Metallopeptidase family M24 F3113_RS07470 PF01321 Creatinase/Prolidase N-terminal domain F3113_RS07475 PF05343 M42 glutamyl aminopeptidase F3113_RS07480 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS07480 PF05524 PEP-utilising enzyme, N-terminal F3113_RS07480 PF00391 PEP-utilising enzyme, mobile domain F3113_RS07480 PF00381 PTS HPr component phosphorylation site F3113_RS07480 PF02896 PEP-utilising enzyme, TIM barrel domain F3113_RS07495 PF12833 Helix-turn-helix domain F3113_RS07500 PF04397 LytTr DNA-binding domain F3113_RS07500 PF00072 Response regulator receiver domain F3113_RS07505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS07505 PF06580 Histidine kinase F3113_RS07505 PF07694 5TMR of 5TMR-LYT F3113_RS07510 PF00155 Aminotransferase class I and II F3113_RS07525 PF03279 Bacterial lipid A biosynthesis acyltransferase F3113_RS07530 PF10810 Protein of unknown function (DUF2545) F3113_RS07535 PF07690 Major Facilitator Superfamily F3113_RS07545 PF00672 HAMP domain F3113_RS07545 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS07545 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS07550 PF02954 Bacterial regulatory protein, Fis family F3113_RS07550 PF00072 Response regulator receiver domain F3113_RS07550 PF14532 Sigma-54 interaction domain F3113_RS07555 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) F3113_RS07560 PF02203 Tar ligand binding domain homologue F3113_RS07560 PF00672 HAMP domain F3113_RS07560 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS07575 PF01226 Formate/nitrite transporter F3113_RS07580 PF04333 MlaA lipoprotein F3113_RS07585 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) F3113_RS07590 PF04175 Protein of unknown function (DUF406) F3113_RS07595 PF02803 Thiolase, C-terminal domain F3113_RS07595 PF00108 Thiolase, N-terminal domain F3113_RS07600 PF00378 Enoyl-CoA hydratase/isomerase F3113_RS07600 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3113_RS07600 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3113_RS07605 PF00300 Histidine phosphatase superfamily (branch 1) F3113_RS07610 PF01713 Smr domain F3113_RS07615 PF05175 Methyltransferase small domain F3113_RS07620 PF01264 Chorismate synthase F3113_RS07625 PF03411 Penicillin-insensitive murein endopeptidase F3113_RS07630 PF01925 Sulfite exporter TauE/SafE F3113_RS07635 PF04315 Elongation factor P hydroxylase F3113_RS07640 PF08891 YfcL protein F3113_RS07645 PF01266 FAD dependent oxidoreductase F3113_RS07645 PF05430 S-adenosyl-L-methionine-dependent methyltransferase F3113_RS07650 PF00109 Beta-ketoacyl synthase, N-terminal domain F3113_RS07650 PF02801 Beta-ketoacyl synthase, C-terminal domain F3113_RS07655 PF07690 Major Facilitator Superfamily F3113_RS07665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3113_RS07665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3113_RS07665 PF11890 Domain of unknown function (DUF3410) F3113_RS07670 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3113_RS07670 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3113_RS07675 PF01416 tRNA pseudouridine synthase F3113_RS07680 PF09335 SNARE associated Golgi protein F3113_RS07685 PF01039 Carboxyl transferase domain F3113_RS07685 PF17848 Acetyl-coA carboxylase zinc finger domain F3113_RS07690 PF02875 Mur ligase family, glutamate ligase domain F3113_RS07690 PF08245 Mur ligase middle domain F3113_RS07695 PF05036 Sporulation related domain F3113_RS07700 PF02674 Colicin V production protein F3113_RS07705 PF00156 Phosphoribosyl transferase domain F3113_RS07710 PF02441 Flavoprotein F3113_RS07715 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS07720 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS07730 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS07735 PF00005 ABC transporter F3113_RS07740 PF13302 Acetyltransferase (GNAT) domain F3113_RS07745 PF01370 NAD dependent epimerase/dehydratase family F3113_RS07745 PF08338 Domain of unknown function (DUF1731) F3113_RS07750 PF02152 Dihydroneopterin aldolase F3113_RS07755 PF00043 Glutathione S-transferase, C-terminal domain F3113_RS07755 PF02798 Glutathione S-transferase, N-terminal domain F3113_RS07760 PF14834 Glutathione S-transferase, C-terminal domain F3113_RS07760 PF02798 Glutathione S-transferase, N-terminal domain F3113_RS07765 PF12850 Calcineurin-like phosphoesterase superfamily domain F3113_RS07770 PF00293 NUDIX domain F3113_RS07775 PF03606 C4-dicarboxylate anaerobic carrier F3113_RS07780 PF07085 DRTGG domain F3113_RS07780 PF01515 Phosphate acetyl/butaryl transferase F3113_RS07785 PF00871 Acetokinase family F3113_RS07790 PF04217 Protein of unknown function, DUF412 F3113_RS07795 PF03887 YfbU domain F3113_RS07800 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS07805 PF02080 TrkA-C domain F3113_RS07805 PF03600 Citrate transporter F3113_RS07815 PF00155 Aminotransferase class I and II F3113_RS07820 PF03466 LysR substrate binding domain F3113_RS07820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS07825 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 F3113_RS07830 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3113_RS07835 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit F3113_RS07835 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit F3113_RS07845 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region F3113_RS07845 PF10531 SLBB domain F3113_RS07845 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3113_RS07850 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS07850 PF00384 Molybdopterin oxidoreductase F3113_RS07850 PF01568 Molydopterin dinucleotide binding domain F3113_RS07850 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region F3113_RS07855 PF00146 NADH dehydrogenase F3113_RS07860 PF12838 4Fe-4S dicluster domain F3113_RS07865 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 F3113_RS07870 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L F3113_RS07875 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus F3113_RS07875 PF00361 Proton-conducting membrane transporter F3113_RS07880 PF00361 Proton-conducting membrane transporter F3113_RS07885 PF00361 Proton-conducting membrane transporter F3113_RS07890 PF00072 Response regulator receiver domain F3113_RS07890 PF01584 CheW-like domain F3113_RS07895 PF12706 Beta-lactamase superfamily domain F3113_RS07900 PF13673 Acetyltransferase (GNAT) domain F3113_RS07905 PF05957 Bacterial protein of unknown function (DUF883) F3113_RS07910 PF00425 chorismate binding enzyme F3113_RS07915 PF16582 Middle domain of thiamine pyrophosphate F3113_RS07915 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS07915 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS07920 PF12697 Alpha/beta hydrolase family F3113_RS07925 PF00378 Enoyl-CoA hydratase/isomerase F3113_RS07930 PF13378 Enolase C-terminal domain-like F3113_RS07935 PF00501 AMP-binding enzyme F3113_RS07935 PF13193 AMP-binding enzyme C-terminal domain F3113_RS07950 PF00892 EamA-like transporter family F3113_RS07955 PF02366 Dolichyl-phosphate-mannose-protein mannosyltransferase F3113_RS07960 PF01522 Polysaccharide deacetylase F3113_RS07965 PF00551 Formyl transferase F3113_RS07965 PF02911 Formyl transferase, C-terminal domain F3113_RS07965 PF01370 NAD dependent epimerase/dehydratase family F3113_RS07970 PF00535 Glycosyl transferase family 2 F3113_RS07975 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F3113_RS07980 PF00293 NUDIX domain F3113_RS07985 PF07437 YfaZ precursor F3113_RS07990 PF00994 Probable molybdopterin binding domain F3113_RS08000 PF02754 Cysteine-rich domain F3113_RS08000 PF13183 4Fe-4S dicluster domain F3113_RS08005 PF00890 FAD binding domain F3113_RS08010 PF01266 FAD dependent oxidoreductase F3113_RS08010 PF04324 BFD-like [2Fe-2S] binding domain F3113_RS08020 PF03009 Glycerophosphoryl diester phosphodiesterase family F3113_RS08025 PF00111 2Fe-2S iron-sulfur cluster binding domain F3113_RS08030 PF00268 Ribonucleotide reductase, small chain F3113_RS08035 PF03477 ATP cone domain F3113_RS08035 PF02867 Ribonucleotide reductase, barrel domain F3113_RS08035 PF00317 Ribonucleotide reductase, all-alpha domain F3113_RS08045 PF03989 DNA gyrase C-terminal domain, beta-propeller F3113_RS08045 PF00521 DNA gyrase/topoisomerase IV, subunit A F3113_RS08050 PF00072 Response regulator receiver domain F3113_RS08050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS08050 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS08050 PF09456 RcsC Alpha-Beta-Loop (ABL) F3113_RS08055 PF00196 Bacterial regulatory proteins, luxR family F3113_RS08055 PF00072 Response regulator receiver domain F3113_RS08060 PF01627 Hpt domain F3113_RS08060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS08060 PF16359 RcsD-ABL domain F3113_RS08065 PF00267 Gram-negative porin F3113_RS08070 PF02424 ApbE family F3113_RS08075 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3113_RS08075 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3113_RS08075 PF02805 Metal binding domain of Ada F3113_RS08075 PF12833 Helix-turn-helix domain F3113_RS08080 PF13532 2OG-Fe(II) oxygenase superfamily F3113_RS08085 PF00005 ABC transporter F3113_RS08090 PF01769 Divalent cation transporter F3113_RS08090 PF00571 CBS domain F3113_RS08090 PF03448 MgtE intracellular N domain F3113_RS08095 PF01740 STAS domain F3113_RS08095 PF00916 Sulfate permease family F3113_RS08100 PF06039 Malate:quinone oxidoreductase (Mqo) F3113_RS08105 PF03974 Ecotin F3113_RS08110 PF00037 4Fe-4S binding domain F3113_RS08110 PF12800 4Fe-4S binding domain F3113_RS08110 PF13187 4Fe-4S dicluster domain F3113_RS08115 PF03927 NapD protein F3113_RS08120 PF00384 Molybdopterin oxidoreductase F3113_RS08120 PF01568 Molydopterin dinucleotide binding domain F3113_RS08120 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS08125 PF12800 4Fe-4S binding domain F3113_RS08125 PF12838 4Fe-4S dicluster domain F3113_RS08130 PF12801 4Fe-4S binding domain F3113_RS08130 PF13237 4Fe-4S dicluster domain F3113_RS08135 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) F3113_RS08140 PF03264 NapC/NirT cytochrome c family, N-terminal region F3113_RS08145 PF00005 ABC transporter F3113_RS08150 PF03379 CcmB protein F3113_RS08155 PF01578 Cytochrome C assembly protein F3113_RS08160 PF04995 Heme exporter protein D (CcmD) F3113_RS08165 PF03100 CcmE F3113_RS08170 PF01578 Cytochrome C assembly protein F3113_RS08170 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal F3113_RS08175 PF08534 Redoxin F3113_RS08180 PF03918 Cytochrome C biogenesis protein F3113_RS08185 PF00072 Response regulator receiver domain F3113_RS08185 PF00196 Bacterial regulatory proteins, luxR family F3113_RS08200 PF06183 DinI-like family F3113_RS08210 PF00717 Peptidase S24-like F3113_RS08220 PF11893 Domain of unknown function (DUF3413) F3113_RS08220 PF00884 Sulfatase F3113_RS08225 PF07208 Protein of unknown function (DUF1414) F3113_RS08230 PF04245 37-kD nucleoid-associated bacterial protein F3113_RS08235 PF01386 Ribosomal L25p family F3113_RS08240 PF04851 Type III restriction enzyme, res subunit F3113_RS08240 PF00271 Helicase conserved C-terminal domain F3113_RS08245 PF01479 S4 domain F3113_RS08245 PF00849 RNA pseudouridylate synthase F3113_RS08250 PF07690 Major Facilitator Superfamily F3113_RS08255 PF13989 YejG-like protein F3113_RS08260 PF00005 ABC transporter F3113_RS08260 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS08265 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS08265 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS08275 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS08280 PF00563 EAL domain F3113_RS08280 PF12792 CSS motif domain associated with EAL F3113_RS08285 PF00877 NlpC/P60 family F3113_RS08290 PF01569 PAP2 superfamily F3113_RS08295 PF02492 CobW/HypB/UreG, nucleotide-binding domain F3113_RS08295 PF07683 Cobalamin synthesis protein cobW C-terminal domain F3113_RS08300 PF01232 Mannitol dehydrogenase Rossmann domain F3113_RS08300 PF08125 Mannitol dehydrogenase C-terminal domain F3113_RS08305 PF03786 D-mannonate dehydratase (UxuA) F3113_RS08310 PF00155 Aminotransferase class I and II F3113_RS08310 PF00392 Bacterial regulatory proteins, gntR family F3113_RS08315 PF03264 NapC/NirT cytochrome c family, N-terminal region F3113_RS08320 PF00384 Molybdopterin oxidoreductase F3113_RS08320 PF18364 Molybdopterin oxidoreductase N-terminal domain F3113_RS08320 PF01568 Molydopterin dinucleotide binding domain F3113_RS08325 PF02613 Nitrate reductase delta subunit F3113_RS08330 PF09285 Elongation factor P, C-terminal F3113_RS08330 PF01132 Elongation factor P (EF-P) OB domain F3113_RS08330 PF08207 Elongation factor P (EF-P) KOW-like domain F3113_RS08345 PF03692 Putative zinc- or iron-chelating domain F3113_RS08355 PF13007 Transposase C of IS166 homeodomain F3113_RS08355 PF13005 zinc-finger binding domain of transposase IS66 F3113_RS08355 PF13817 IS66 C-terminal element F3113_RS08355 PF03050 Transposase IS66 family F3113_RS08375 PF02796 Helix-turn-helix domain of resolvase F3113_RS08375 PF00239 Resolvase, N terminal domain F3113_RS08380 PF16916 Dimerisation domain of Zinc Transporter F3113_RS08380 PF01545 Cation efflux family F3113_RS08415 PF13408 Recombinase zinc beta ribbon domain F3113_RS08415 PF00239 Resolvase, N terminal domain F3113_RS08415 PF07508 Recombinase F3113_RS08420 PF03692 Putative zinc- or iron-chelating domain F3113_RS08425 PF07690 Major Facilitator Superfamily F3113_RS08430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS08430 PF00381 PTS HPr component phosphorylation site F3113_RS08435 PF00294 pfkB family carbohydrate kinase F3113_RS08440 PF02378 Phosphotransferase system, EIIC F3113_RS08440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS08445 PF03605 Anaerobic c4-dicarboxylate membrane transporter F3113_RS08450 PF01177 Asp/Glu/Hydantoin racemase F3113_RS08455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS08455 PF03466 LysR substrate binding domain F3113_RS08460 PF00294 pfkB family carbohydrate kinase F3113_RS08465 PF04227 Indigoidine synthase A like protein F3113_RS08470 PF07662 Na+ dependent nucleoside transporter C-terminus F3113_RS08470 PF01773 Na+ dependent nucleoside transporter N-terminus F3113_RS08475 PF00294 pfkB family carbohydrate kinase F3113_RS08480 PF01261 Xylose isomerase-like TIM barrel F3113_RS08485 PF03601 Conserved hypothetical protein 698 F3113_RS08490 PF03466 LysR substrate binding domain F3113_RS08490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS08495 PF00324 Amino acid permease F3113_RS08500 PF07715 TonB-dependent Receptor Plug Domain F3113_RS08500 PF00593 TonB dependent receptor F3113_RS08505 PF07690 Major Facilitator Superfamily F3113_RS08510 PF18429 Domain of unknown function (DUF5609) F3113_RS08515 PF03313 Serine dehydratase alpha chain F3113_RS08515 PF03315 Serine dehydratase beta chain F3113_RS08525 PF00756 Putative esterase F3113_RS08530 PF01227 GTP cyclohydrolase I F3113_RS08535 PF04235 Protein of unknown function (DUF418) F3113_RS08540 PF00356 Bacterial regulatory proteins, lacI family F3113_RS08545 PF13407 Periplasmic binding protein domain F3113_RS08550 PF00005 ABC transporter F3113_RS08555 PF02653 Branched-chain amino acid transport system / permease component F3113_RS08560 PF01180 Dihydroorotate dehydrogenase F3113_RS08565 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster F3113_RS08565 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS08570 PF10808 Protein of unknown function (DUF2542) F3113_RS08575 PF02698 DUF218 domain F3113_RS08580 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3113_RS08580 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region F3113_RS08585 PF04172 LrgB-like family F3113_RS08590 PF03788 LrgA family F3113_RS08595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS08595 PF03466 LysR substrate binding domain F3113_RS08600 PF07690 Major Facilitator Superfamily F3113_RS08610 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3113_RS08615 PF02798 Glutathione S-transferase, N-terminal domain F3113_RS08615 PF14497 Glutathione S-transferase, C-terminal domain F3113_RS08620 PF01494 FAD binding domain F3113_RS08625 PF01207 Dihydrouridine synthase (Dus) F3113_RS08630 PF08241 Methyltransferase domain F3113_RS08640 PF02321 Outer membrane efflux protein F3113_RS08645 PF09335 SNARE associated Golgi protein F3113_RS08650 PF04893 Yip1 domain F3113_RS08655 PF00768 D-alanyl-D-alanine carboxypeptidase F3113_RS08660 PF09330 D-lactate dehydrogenase, membrane binding F3113_RS08660 PF01565 FAD binding domain F3113_RS08665 PF01915 Glycosyl hydrolase family 3 C-terminal domain F3113_RS08665 PF00933 Glycosyl hydrolase family 3 N terminal domain F3113_RS08665 PF14310 Fibronectin type III-like domain F3113_RS08670 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3113_RS08675 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS08680 PF00005 ABC transporter F3113_RS08685 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS08695 PF13411 MerR HTH family regulatory protein F3113_RS08700 PF07694 5TMR of 5TMR-LYT F3113_RS08700 PF06580 Histidine kinase F3113_RS08705 PF00072 Response regulator receiver domain F3113_RS08705 PF04397 LytTr DNA-binding domain F3113_RS08710 PF07308 Protein of unknown function (DUF1456) F3113_RS08715 PF06998 Protein of unknown function (DUF1307) F3113_RS08720 PF09334 tRNA synthetases class I (M) F3113_RS08720 PF01588 Putative tRNA binding domain F3113_RS08725 PF10609 NUBPL iron-transfer P-loop NTPase F3113_RS08740 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS08740 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS08745 PF00577 Outer membrane usher protein F3113_RS08745 PF13953 PapC C-terminal domain F3113_RS08745 PF13954 PapC N-terminal domain F3113_RS08755 PF11776 Nickel/cobalt transporter regulator F3113_RS08780 PF00589 Phage integrase family F3113_RS08855 PF02110 Hydroxyethylthiazole kinase family F3113_RS08860 PF08543 Phosphomethylpyrimidine kinase F3113_RS08865 PF07702 UTRA domain F3113_RS08865 PF00392 Bacterial regulatory proteins, gntR family F3113_RS08870 PF00294 pfkB family carbohydrate kinase F3113_RS08875 PF03747 ADP-ribosylglycohydrolase F3113_RS08880 PF03825 Nucleoside H+ symporter F3113_RS08885 PF01791 DeoC/LacD family aldolase F3113_RS08890 PF00781 Diacylglycerol kinase catalytic domain F3113_RS08895 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS08900 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS08905 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS08910 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS08915 PF00005 ABC transporter F3113_RS08920 PF12883 Protein of unknown function (DUF3828) F3113_RS08925 PF01906 Putative heavy-metal-binding F3113_RS08930 PF01510 N-acetylmuramoyl-L-alanine amidase F3113_RS08935 PF01370 NAD dependent epimerase/dehydratase family F3113_RS08940 PF11066 Protein of unknown function (DUF2867) F3113_RS08940 PF13460 NAD(P)H-binding F3113_RS08945 PF01212 Beta-eliminating lyase F3113_RS08950 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS08950 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS08950 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS08960 PF13454 FAD-NAD(P)-binding F3113_RS08965 PF00175 Oxidoreductase NAD-binding domain F3113_RS08965 PF00111 2Fe-2S iron-sulfur cluster binding domain F3113_RS08965 PF00970 Oxidoreductase FAD-binding domain F3113_RS08970 PF03063 Prismane/CO dehydrogenase family F3113_RS08975 PF03956 Lysine exporter LysO F3113_RS08980 PF00230 Major intrinsic protein F3113_RS08985 PF11398 Protein of unknown function (DUF2813) F3113_RS08990 PF04393 Protein of unknown function (DUF535) F3113_RS08995 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS09000 PF12704 MacB-like periplasmic core domain F3113_RS09000 PF02687 FtsX-like permease family F3113_RS09000 PF00005 ABC transporter F3113_RS09005 PF00313 'Cold-shock' DNA-binding domain F3113_RS09010 PF02617 ATP-dependent Clp protease adaptor protein ClpS F3113_RS09015 PF07724 AAA domain (Cdc48 subfamily) F3113_RS09015 PF02861 Clp amino terminal domain, pathogenicity island component F3113_RS09015 PF10431 C-terminal, D2-small domain, of ClpB protein F3113_RS09015 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS09015 PF17871 AAA lid domain F3113_RS09020 PF01136 Peptidase family U32 F3113_RS09020 PF16325 Peptidase family U32 C-terminal domain F3113_RS09025 PF07411 Domain of unknown function (DUF1508) F3113_RS09030 PF00486 Transcriptional regulatory protein, C terminal F3113_RS09030 PF00072 Response regulator receiver domain F3113_RS09035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS09035 PF00672 HAMP domain F3113_RS09035 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS09040 PF07690 Major Facilitator Superfamily F3113_RS09045 PF00873 AcrB/AcrD/AcrF family F3113_RS09050 PF00873 AcrB/AcrD/AcrF family F3113_RS09055 PF13533 Biotin-lipoyl like F3113_RS09065 PF00012 Hsp70 protein F3113_RS09070 PF06029 AlkA N-terminal domain F3113_RS09070 PF00730 HhH-GPD superfamily base excision DNA repair protein F3113_RS09075 PF05231 MASE1 F3113_RS09075 PF13426 PAS domain F3113_RS09075 PF08448 PAS fold F3113_RS09075 PF00563 EAL domain F3113_RS09075 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS09075 PF08447 PAS fold F3113_RS09080 PF00485 Phosphoribulokinase / Uridine kinase family F3113_RS09085 PF00692 dUTPase F3113_RS09090 PF05170 AsmA family F3113_RS09095 PF03471 Transporter associated domain F3113_RS09095 PF00571 CBS domain F3113_RS09095 PF03741 Integral membrane protein TerC family F3113_RS09100 PF02563 Polysaccharide biosynthesis/export protein F3113_RS09100 PF10531 SLBB domain F3113_RS09100 PF18412 Outer-membrane lipoprotein Wza C-terminal domain F3113_RS09105 PF01451 Low molecular weight phosphotyrosine protein phosphatase F3113_RS09110 PF02706 Chain length determinant protein F3113_RS09110 PF13614 AAA domain F3113_RS09110 PF13807 G-rich domain on putative tyrosine kinase F3113_RS09115 PF00535 Glycosyl transferase family 2 F3113_RS09120 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS09125 PF00534 Glycosyl transferases group 1 F3113_RS09125 PF13439 Glycosyltransferase Family 4 F3113_RS09135 PF00535 Glycosyl transferase family 2 F3113_RS09140 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS09145 PF16363 GDP-mannose 4,6 dehydratase F3113_RS09150 PF01370 NAD dependent epimerase/dehydratase family F3113_RS09155 PF00293 NUDIX domain F3113_RS09160 PF13579 Glycosyl transferase 4-like domain F3113_RS09160 PF00534 Glycosyl transferases group 1 F3113_RS09165 PF01050 Mannose-6-phosphate isomerase F3113_RS09165 PF00483 Nucleotidyl transferase F3113_RS09170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3113_RS09170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3113_RS09170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3113_RS09170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3113_RS09175 PF02397 Bacterial sugar transferase F3113_RS09185 PF04230 Polysaccharide pyruvyl transferase F3113_RS09190 PF13439 Glycosyltransferase Family 4 F3113_RS09190 PF00534 Glycosyl transferases group 1 F3113_RS09200 PF00483 Nucleotidyl transferase F3113_RS09240 PF16363 GDP-mannose 4,6 dehydratase F3113_RS09245 PF04321 RmlD substrate binding domain F3113_RS09250 PF00483 Nucleotidyl transferase F3113_RS09255 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3113_RS09255 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain F3113_RS09260 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3113_RS09260 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3113_RS09265 PF01370 NAD dependent epimerase/dehydratase family F3113_RS09270 PF02706 Chain length determinant protein F3113_RS09275 PF01502 Phosphoribosyl-AMP cyclohydrolase F3113_RS09275 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase F3113_RS09280 PF00977 Histidine biosynthesis protein F3113_RS09285 PF00977 Histidine biosynthesis protein F3113_RS09290 PF00117 Glutamine amidotransferase class-I F3113_RS09295 PF00475 Imidazoleglycerol-phosphate dehydratase F3113_RS09300 PF00155 Aminotransferase class I and II F3113_RS09305 PF00815 Histidinol dehydrogenase F3113_RS09310 PF08029 HisG, C-terminal domain F3113_RS09310 PF01634 ATP phosphoribosyltransferase F3113_RS09320 PF01370 NAD dependent epimerase/dehydratase family F3113_RS09325 PF03466 LysR substrate binding domain F3113_RS09325 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS09335 PF13520 Amino acid permease F3113_RS09340 PF00929 Exonuclease F3113_RS09340 PF08411 Exonuclease C-terminal F3113_RS09355 PF00384 Molybdopterin oxidoreductase F3113_RS09355 PF01568 Molydopterin dinucleotide binding domain F3113_RS09355 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS09360 PF13247 4Fe-4S dicluster domain F3113_RS09360 PF12800 4Fe-4S binding domain F3113_RS09365 PF01292 Prokaryotic cytochrome b561 F3113_RS09370 PF00768 D-alanyl-D-alanine carboxypeptidase F3113_RS09370 PF07943 Penicillin-binding protein 5, C-terminal domain F3113_RS09375 PF06445 GyrI-like small molecule binding domain F3113_RS09380 PF04632 Fusaric acid resistance protein family F3113_RS09385 PF04363 Protein of unknown function (DUF496) F3113_RS09390 PF00288 GHMP kinases N terminal domain F3113_RS09395 PF00871 Acetokinase family F3113_RS09400 PF10662 Ethanolamine utilisation - propanediol utilisation F3113_RS09405 PF00936 BMC domain F3113_RS09415 PF13375 RnfC Barrel sandwich hybrid domain F3113_RS09415 PF10531 SLBB domain F3113_RS09415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3113_RS09415 PF13237 4Fe-4S dicluster domain F3113_RS09420 PF00465 Iron-containing alcohol dehydrogenase F3113_RS09425 PF00171 Aldehyde dehydrogenase family F3113_RS09430 PF01923 Cobalamin adenosyltransferase F3113_RS09435 PF03319 Ethanolamine utilisation protein EutN/carboxysome F3113_RS09445 PF06130 Phosphate propanoyltransferase F3113_RS09455 PF00936 BMC domain F3113_RS09465 PF08841 Diol dehydratase reactivase ATPase-like domain F3113_RS09465 PF18427 DD-reactivating factor swiveling domain F3113_RS09470 PF02287 Dehydratase small subunit F3113_RS09475 PF02288 Dehydratase medium subunit F3113_RS09480 PF02286 Dehydratase large subunit F3113_RS09485 PF00936 BMC domain F3113_RS09490 PF00936 BMC domain F3113_RS09495 PF00230 Major intrinsic protein F3113_RS09500 PF10114 Sensory domain found in PocR F3113_RS09500 PF12833 Helix-turn-helix domain F3113_RS09505 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3113_RS09505 PF07685 CobB/CobQ-like glutamine amidotransferase domain F3113_RS09510 PF03186 CobD/Cbib protein F3113_RS09515 PF02570 Precorrin-8X methylmutase F3113_RS09520 PF01888 CbiD F3113_RS09525 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS09530 PF05175 Methyltransferase small domain F3113_RS09535 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS09540 PF11760 Cobalamin synthesis G N-terminal F3113_RS09540 PF01890 Cobalamin synthesis G C-terminus F3113_RS09540 PF11761 Cobalamin biosynthesis central region F3113_RS09545 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS09550 PF02571 Precorrin-6x reductase CbiJ/CobK F3113_RS09555 PF06180 Cobalt chelatase (CbiK) F3113_RS09560 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS09565 PF01891 Cobalt uptake substrate-specific transmembrane region F3113_RS09570 PF02553 Cobalt transport protein component CbiN F3113_RS09575 PF02361 Cobalt transport protein F3113_RS09580 PF00005 ABC transporter F3113_RS09585 PF07685 CobB/CobQ-like glutamine amidotransferase domain F3113_RS09590 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase F3113_RS09595 PF02654 Cobalamin-5-phosphate synthase F3113_RS09600 PF02277 Phosphoribosyltransferase F3113_RS09605 PF17969 L,D-transpeptidase C-terminal domain F3113_RS09605 PF03734 L,D-transpeptidase catalytic domain F3113_RS09610 PF00005 ABC transporter F3113_RS09615 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS09620 PF13416 Bacterial extracellular solute-binding protein F3113_RS09630 PF06167 Glucose-regulated metallo-peptidase M90 F3113_RS09640 PF00893 Small Multidrug Resistance protein F3113_RS09645 PF00267 Gram-negative porin F3113_RS09650 PF01966 HD domain F3113_RS09655 PF00145 C-5 cytosine-specific DNA methylase F3113_RS09655 PF18284 DNA methylase N-terminal domain F3113_RS09660 PF03852 DNA mismatch endonuclease Vsr F3113_RS09665 PF00892 EamA-like transporter family F3113_RS09670 PF05661 Protein of unknown function (DUF808) F3113_RS09675 PF09926 Uncharacterized small protein (DUF2158) F3113_RS09680 PF10733 Protein of unknown function (DUF2525) F3113_RS09685 PF10781 Dextransucrase DSRB F3113_RS09690 PF00196 Bacterial regulatory proteins, luxR family F3113_RS09695 PF01311 Bacterial export proteins, family 1 F3113_RS09700 PF01313 Bacterial export proteins, family 3 F3113_RS09705 PF00813 FliP family F3113_RS09710 PF04347 Flagellar biosynthesis protein, FliO F3113_RS09715 PF16973 Flagellar motor switch protein FliN N-terminal F3113_RS09715 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3113_RS09720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3113_RS09720 PF02154 Flagellar motor switch protein FliM F3113_RS09725 PF03748 Flagellar basal body-associated protein FliL F3113_RS09730 PF02120 Flagellar hook-length control protein FliK F3113_RS09735 PF02050 Flagellar FliJ protein F3113_RS09740 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3113_RS09740 PF18269 T3SS EscN ATPase C-terminal domain F3113_RS09745 PF02108 Flagellar assembly protein FliH F3113_RS09750 PF01706 FliG C-terminal domain F3113_RS09750 PF14842 FliG N-terminal domain F3113_RS09750 PF14841 FliG middle domain F3113_RS09755 PF08345 Flagellar M-ring protein C-terminal F3113_RS09755 PF01514 Secretory protein of YscJ/FliF family F3113_RS09760 PF02049 Flagellar hook-basal body complex protein FliE F3113_RS09765 PF01206 Sulfurtransferase TusA F3113_RS09770 PF04143 Sulphur transport F3113_RS09775 PF13987 YedD-like protein F3113_RS09780 PF00128 Alpha amylase, catalytic domain F3113_RS09780 PF02806 Alpha amylase, C-terminal all-beta domain F3113_RS09785 PF05400 Flagellar protein FliT F3113_RS09790 PF02561 Flagellar protein FliS F3113_RS09795 PF07196 Flagellin hook IN motif F3113_RS09795 PF07195 Flagellar hook-associated protein 2 C-terminus F3113_RS09795 PF02465 Flagellar hook-associated protein 2 N-terminus F3113_RS09800 PF00669 Bacterial flagellin N-terminal helical region F3113_RS09800 PF00700 Bacterial flagellin C-terminal helical region F3113_RS09800 PF08884 Flagellin D3 domain F3113_RS09805 PF04539 Sigma-70 region 3 F3113_RS09805 PF04545 Sigma-70, region 4 F3113_RS09805 PF04542 Sigma-70 region 2 F3113_RS09810 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS09815 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS09820 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS09830 PF00005 ABC transporter F3113_RS09835 PF00196 Bacterial regulatory proteins, luxR family F3113_RS09835 PF03472 Autoinducer binding domain F3113_RS09840 PF10769 Protein of unknown function (DUF2594) F3113_RS09845 PF00196 Bacterial regulatory proteins, luxR family F3113_RS09845 PF00072 Response regulator receiver domain F3113_RS09850 PF02151 UvrB/uvrC motif F3113_RS09850 PF01541 GIY-YIG catalytic domain F3113_RS09850 PF08459 UvrC Helix-hairpin-helix N-terminal F3113_RS09855 PF01066 CDP-alcohol phosphatidyltransferase F3113_RS09875 PF00589 Phage integrase family F3113_RS09875 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS09935 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3113_RS09950 PF05840 Bacteriophage replication gene A protein (GPA) F3113_RS10105 PF01841 Transglutaminase-like superfamily F3113_RS10115 PF00403 Heavy-metal-associated domain F3113_RS10120 PF03695 Uncharacterised protein family (UPF0149) F3113_RS10120 PF02810 SEC-C motif F3113_RS10125 PF03222 Tryptophan/tyrosine permease family F3113_RS10130 PF10678 Protein of unknown function (DUF2492) F3113_RS10135 PF00210 Ferritin-like domain F3113_RS10140 PF13992 YecR-like lipoprotein F3113_RS10150 PF07690 Major Facilitator Superfamily F3113_RS10155 PF10964 Protein of unknown function (DUF2766) F3113_RS10160 PF00210 Ferritin-like domain F3113_RS10170 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS10175 PF00005 ABC transporter F3113_RS10180 PF02653 Branched-chain amino acid transport system / permease component F3113_RS10185 PF02358 Trehalose-phosphatase F3113_RS10190 PF00982 Glycosyltransferase family 20 F3113_RS10195 PF00582 Universal stress protein family F3113_RS10200 PF05247 Flagellar transcriptional activator (FlhD) F3113_RS10205 PF05280 Flagellar transcriptional activator (FlhC) F3113_RS10210 PF01618 MotA/TolQ/ExbB proton channel family F3113_RS10215 PF13677 Membrane MotB of proton-channel complex MotA/MotB F3113_RS10215 PF00691 OmpA family F3113_RS10225 PF01584 CheW-like domain F3113_RS10230 PF03797 Autotransporter beta-domain F3113_RS10235 PF00375 Sodium:dicarboxylate symporter family F3113_RS10240 PF00672 HAMP domain F3113_RS10240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS10240 PF02203 Tar ligand binding domain homologue F3113_RS10245 PF02203 Tar ligand binding domain homologue F3113_RS10245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS10245 PF00672 HAMP domain F3113_RS10250 PF03705 CheR methyltransferase, all-alpha domain F3113_RS10250 PF01739 CheR methyltransferase, SAM binding domain F3113_RS10255 PF00072 Response regulator receiver domain F3113_RS10255 PF01339 CheB methylesterase F3113_RS10260 PF00072 Response regulator receiver domain F3113_RS10265 PF04344 Chemotaxis phosphatase, CheZ F3113_RS10270 PF01312 FlhB HrpN YscU SpaS Family F3113_RS10275 PF00771 FHIPEP family F3113_RS10280 PF06366 Flagellar protein FlhE F3113_RS10285 PF07470 Glycosyl Hydrolase Family 88 F3113_RS10290 PF03717 Penicillin-binding Protein dimerisation domain F3113_RS10290 PF00905 Penicillin binding protein transpeptidase domain F3113_RS10295 PF03485 Arginyl tRNA synthetase N terminal domain F3113_RS10295 PF00750 tRNA synthetases class I (R) F3113_RS10295 PF05746 DALR anticodon binding domain F3113_RS10300 PF06185 YecM protein F3113_RS10305 PF03932 CutC family F3113_RS10310 PF08003 Protein of unknown function (DUF1698) F3113_RS10315 PF13649 Methyltransferase domain F3113_RS10320 PF01124 MAPEG family F3113_RS10325 PF01904 Protein of unknown function DUF72 F3113_RS10330 PF00589 Phage integrase family F3113_RS10330 PF12167 Arm DNA-binding domain F3113_RS10415 PF03354 Phage Terminase F3113_RS10420 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3113_RS10430 PF01726 LexA DNA binding domain F3113_RS10430 PF00717 Peptidase S24-like F3113_RS10445 PF06147 Protein of unknown function (DUF968) F3113_RS10470 PF00182 Chitinase class I F3113_RS10490 PF09669 Phage regulatory protein Rha (Phage_pRha) F3113_RS10490 PF10549 ORF11CD3 domain F3113_RS10510 PF05717 IS66 Orf2 like protein F3113_RS10515 PF13005 zinc-finger binding domain of transposase IS66 F3113_RS10515 PF03050 Transposase IS66 family F3113_RS10515 PF13007 Transposase C of IS166 homeodomain F3113_RS10515 PF13817 IS66 C-terminal element F3113_RS10540 PF00574 Clp protease F3113_RS10630 PF06183 DinI-like family F3113_RS10635 PF00717 Peptidase S24-like F3113_RS10640 PF02586 SOS response associated peptidase (SRAP) F3113_RS10645 PF00857 Isochorismatase family F3113_RS10650 PF02938 GAD domain F3113_RS10650 PF01336 OB-fold nucleic acid binding domain F3113_RS10650 PF00152 tRNA synthetases class II (D, K and N) F3113_RS10655 PF00293 NUDIX domain F3113_RS10660 PF01709 Transcriptional regulator F3113_RS10665 PF02075 Crossover junction endodeoxyribonuclease RuvC F3113_RS10670 PF01330 RuvA N terminal domain F3113_RS10670 PF07499 RuvA, C-terminal domain F3113_RS10675 PF17864 RuvB AAA lid domain F3113_RS10675 PF05491 RuvB C-terminal winged helix domain F3113_RS10675 PF05496 Holliday junction DNA helicase RuvB P-loop domain F3113_RS10680 PF00950 ABC 3 transport family F3113_RS10685 PF00005 ABC transporter F3113_RS10690 PF01297 Zinc-uptake complex component A periplasmic F3113_RS10695 PF01551 Peptidase family M23 F3113_RS10695 PF08525 Opacity-associated protein A N-terminal motif F3113_RS10695 PF01476 LysM domain F3113_RS10700 PF03279 Bacterial lipid A biosynthesis acyltransferase F3113_RS10705 PF00224 Pyruvate kinase, barrel domain F3113_RS10705 PF02887 Pyruvate kinase, alpha/beta domain F3113_RS10710 PF01418 Helix-turn-helix domain, rpiR family F3113_RS10710 PF01380 SIS domain F3113_RS10715 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain F3113_RS10715 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain F3113_RS10720 PF00920 Dehydratase family F3113_RS10725 PF01081 KDPG and KHG aldolase F3113_RS10730 PF02222 ATP-grasp domain F3113_RS10735 PF07130 YebG protein F3113_RS10740 PF13995 YebF-like protein F3113_RS10745 PF04391 Protein of unknown function (DUF533) F3113_RS10750 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain F3113_RS10750 PF00326 Prolyl oligopeptidase family F3113_RS10755 PF00929 Exonuclease F3113_RS10760 PF00795 Carbon-nitrogen hydrolase F3113_RS10765 PF06440 DNA polymerase III, theta subunit F3113_RS10780 PF02796 Helix-turn-helix domain of resolvase F3113_RS10780 PF00239 Resolvase, N terminal domain F3113_RS10785 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS10795 PF04234 CopC domain F3113_RS10800 PF05425 Copper resistance protein D F3113_RS10805 PF10709 Protein of unknown function (DUF2511) F3113_RS10810 PF00149 Calcineurin-like phosphoesterase F3113_RS10815 PF07358 Protein of unknown function (DUF1482) F3113_RS10820 PF07351 Protein of unknown function (DUF1480) F3113_RS10825 PF01189 16S rRNA methyltransferase RsmB/F F3113_RS10825 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF F3113_RS10825 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF F3113_RS10830 PF02470 MlaD protein F3113_RS10835 PF04403 Paraquat-inducible protein A F3113_RS10840 PF13185 GAF domain F3113_RS10845 PF17516 ProQ C-terminal domain F3113_RS10845 PF04352 ProQ/FINO family F3113_RS10850 PF17804 Tail specific protease N-terminal domain F3113_RS10850 PF03572 Peptidase family S41 F3113_RS10850 PF00595 PDZ domain F3113_RS10850 PF11818 C-terminal domain of tail specific protease (DUF3340) F3113_RS10855 PF01435 Peptidase family M48 F3113_RS10865 PF07720 Tetratricopeptide repeat F3113_RS10890 PF01514 Secretory protein of YscJ/FliF family F3113_RS10900 PF09392 Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF F3113_RS10920 PF03958 Bacterial type II/III secretion system short domain F3113_RS10920 PF00263 Bacterial type II and III secretion system protein F3113_RS10935 PF00771 FHIPEP family F3113_RS10940 PF03519 Invasion protein B family F3113_RS10945 PF18269 T3SS EscN ATPase C-terminal domain F3113_RS10945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3113_RS10945 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3113_RS10960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term F3113_RS10965 PF00813 FliP family F3113_RS10970 PF01313 Bacterial export proteins, family 3 F3113_RS10975 PF01311 Bacterial export proteins, family 1 F3113_RS10985 PF01464 Transglycosylase SLT domain F3113_RS10985 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain F3113_RS10990 PF00072 Response regulator receiver domain F3113_RS10990 PF00196 Bacterial regulatory proteins, luxR family F3113_RS10995 PF06511 Type III secretion systems tip complex components F3113_RS11005 PF07690 Major Facilitator Superfamily F3113_RS11010 PF09339 IclR helix-turn-helix domain F3113_RS11010 PF01614 Bacterial transcriptional regulator F3113_RS11015 PF13996 YobH-like protein F3113_RS11020 PF13998 MgrB protein F3113_RS11025 PF13974 YebO-like protein F3113_RS11030 PF10736 Protein of unknown function (DUF2627) F3113_RS11035 PF00313 'Cold-shock' DNA-binding domain F3113_RS11040 PF03717 Penicillin-binding Protein dimerisation domain F3113_RS11040 PF00905 Penicillin binding protein transpeptidase domain F3113_RS11045 PF13847 Methyltransferase domain F3113_RS11050 PF02659 Putative manganese efflux pump F3113_RS11055 PF06173 Protein of unknown function (DUF986) F3113_RS11060 PF03613 PTS system mannose/fructose/sorbose family IID component F3113_RS11065 PF03609 PTS system sorbose-specific iic component F3113_RS11070 PF03830 PTS system sorbose subfamily IIB component F3113_RS11070 PF03610 PTS system fructose IIA component F3113_RS11075 PF03471 Transporter associated domain F3113_RS11075 PF03741 Integral membrane protein TerC family F3113_RS11080 PF00563 EAL domain F3113_RS11080 PF12792 CSS motif domain associated with EAL F3113_RS11085 PF03313 Serine dehydratase alpha chain F3113_RS11085 PF03315 Serine dehydratase beta chain F3113_RS11090 PF00293 NUDIX domain F3113_RS11095 PF00425 chorismate binding enzyme F3113_RS11095 PF04715 Anthranilate synthase component I, N terminal region F3113_RS11100 PF03701 Uncharacterised protein family (UPF0181) F3113_RS11105 PF01042 Endoribonuclease L-PSP F3113_RS11110 PF13307 Helicase C-terminal domain F3113_RS11110 PF04851 Type III restriction enzyme, res subunit F3113_RS11115 PF00814 Glycoprotease family F3113_RS11120 PF03843 Outer membrane lipoprotein Slp family F3113_RS11125 PF13193 AMP-binding enzyme C-terminal domain F3113_RS11125 PF00501 AMP-binding enzyme F3113_RS11130 PF00570 HRDC domain F3113_RS11130 PF01612 3'-5' exonuclease F3113_RS11135 PF00180 Isocitrate/isopropylmalate dehydrogenase F3113_RS11140 PF03466 LysR substrate binding domain F3113_RS11140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS11145 PF03776 Septum formation topological specificity factor MinE F3113_RS11150 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain F3113_RS11155 PF05209 Septum formation inhibitor MinC, N-terminal domain F3113_RS11155 PF03775 Septum formation inhibitor MinC, C-terminal domain F3113_RS11160 PF05166 YcgL domain F3113_RS11165 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3113_RS11170 PF03692 Putative zinc- or iron-chelating domain F3113_RS11180 PF02600 Disulfide bond formation protein DsbB F3113_RS11185 PF06450 Bacterial Na+/H+ antiporter B (NhaB) F3113_RS11190 PF07840 FadR C-terminal domain F3113_RS11190 PF00392 Bacterial regulatory proteins, gntR family F3113_RS11195 PF04293 SpoVR like protein F3113_RS11200 PF01266 FAD dependent oxidoreductase F3113_RS11205 PF00842 Alanine racemase, C-terminal domain F3113_RS11205 PF01168 Alanine racemase, N-terminal domain F3113_RS11210 PF00999 Sodium/hydrogen exchanger family F3113_RS11210 PF02080 TrkA-C domain F3113_RS11210 PF03471 Transporter associated domain F3113_RS11215 PF02016 LD-carboxypeptidase N-terminal domain F3113_RS11215 PF17676 LD-carboxypeptidase C-terminal domain F3113_RS11220 PF01464 Transglycosylase SLT domain F3113_RS11225 PF07238 PilZ domain F3113_RS11225 PF07317 Flagellar regulator YcgR F3113_RS11230 PF04226 Transglycosylase associated protein F3113_RS11240 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F3113_RS11240 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F3113_RS11250 PF00005 ABC transporter F3113_RS11255 PF01032 FecCD transport family F3113_RS11260 PF01497 Periplasmic binding protein F3113_RS11265 PF01204 Trehalase F3113_RS11270 PF05524 PEP-utilising enzyme, N-terminal F3113_RS11270 PF00381 PTS HPr component phosphorylation site F3113_RS11270 PF03610 PTS system fructose IIA component F3113_RS11270 PF00391 PEP-utilising enzyme, mobile domain F3113_RS11275 PF02734 DAK2 domain F3113_RS11280 PF02733 Dak1 domain F3113_RS11285 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F3113_RS11285 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F3113_RS11315 PF13411 MerR HTH family regulatory protein F3113_RS11320 PF00563 EAL domain F3113_RS11320 PF04940 Sensors of blue-light using FAD F3113_RS11325 PF10798 Biofilm development protein YmgB/AriR F3113_RS11335 PF10798 Biofilm development protein YmgB/AriR F3113_RS11345 PF01306 LacY proton/sugar symporter F3113_RS11350 PF00294 pfkB family carbohydrate kinase F3113_RS11355 PF00251 Glycosyl hydrolases family 32 N-terminal domain F3113_RS11355 PF08244 Glycosyl hydrolases family 32 C terminal F3113_RS11360 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS11360 PF00356 Bacterial regulatory proteins, lacI family F3113_RS11365 PF06071 Protein of unknown function (DUF933) F3113_RS11365 PF01926 50S ribosome-binding GTPase F3113_RS11370 PF01195 Peptidyl-tRNA hydrolase F3113_RS11375 PF10762 Protein of unknown function (DUF2583) F3113_RS11380 PF00696 Amino acid kinase family F3113_RS11380 PF01842 ACT domain F3113_RS11385 PF00202 Aminotransferase class-III F3113_RS11390 PF00282 Pyridoxal-dependent decarboxylase conserved domain F3113_RS11395 PF00916 Sulfate permease family F3113_RS11395 PF01740 STAS domain F3113_RS11400 PF14572 Phosphoribosyl synthetase-associated domain F3113_RS11400 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase F3113_RS11405 PF08544 GHMP kinases C terminal F3113_RS11405 PF00288 GHMP kinases N terminal domain F3113_RS11410 PF03550 Outer membrane lipoprotein LolB F3113_RS11415 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain F3113_RS11415 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain F3113_RS11415 PF01488 Shikimate / quinate 5-dehydrogenase F3113_RS11420 PF00472 RF-1 domain F3113_RS11420 PF03462 PCRF domain F3113_RS11425 PF17827 PrmC N-terminal domain F3113_RS11425 PF13847 Methyltransferase domain F3113_RS11430 PF04247 Invasion gene expression up-regulator, SirB F3113_RS11435 PF13369 Transglutaminase-like superfamily F3113_RS11440 PF00793 DAHP synthetase I family F3113_RS11445 PF01699 Sodium/calcium exchanger protein F3113_RS11450 PF04752 ChaC-like protein F3113_RS11460 PF02635 DsrE/DsrF-like family F3113_RS11465 PF11924 Inverse autotransporter, beta-domain F3113_RS11470 PF00072 Response regulator receiver domain F3113_RS11470 PF00196 Bacterial regulatory proteins, luxR family F3113_RS11475 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term F3113_RS11475 PF07730 Histidine kinase F3113_RS11475 PF00672 HAMP domain F3113_RS11475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS11480 PF07690 Major Facilitator Superfamily F3113_RS11485 PF14710 Respiratory nitrate reductase alpha N-terminal F3113_RS11485 PF00384 Molybdopterin oxidoreductase F3113_RS11485 PF01568 Molydopterin dinucleotide binding domain F3113_RS11490 PF14711 Respiratory nitrate reductase beta C-terminal F3113_RS11490 PF13247 4Fe-4S dicluster domain F3113_RS11495 PF02613 Nitrate reductase delta subunit F3113_RS11500 PF02665 Nitrate reductase gamma subunit F3113_RS11525 PF01842 ACT domain F3113_RS11525 PF00551 Formyl transferase F3113_RS11530 PF02810 SEC-C motif F3113_RS11535 PF01734 Patatin-like phospholipase F3113_RS11540 PF00072 Response regulator receiver domain F3113_RS11545 PF00483 Nucleotidyl transferase F3113_RS11550 PF00816 H-NS histone family F3113_RS11555 PF00265 Thymidine kinase F3113_RS11560 PF00465 Iron-containing alcohol dehydrogenase F3113_RS11560 PF00171 Aldehyde dehydrogenase family F3113_RS11565 PF01914 MarC family integral membrane protein F3113_RS11570 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS11575 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS11580 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS11580 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS11585 PF00005 ABC transporter F3113_RS11585 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS11590 PF00005 ABC transporter F3113_RS11590 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS11595 PF00027 Cyclic nucleotide-binding domain F3113_RS11595 PF00520 Ion transport protein F3113_RS11600 PF04269 Protein of unknown function, DUF440 F3113_RS11605 PF13091 PLD-like domain F3113_RS11605 PF13396 Phospholipase_D-nuclease N-terminal F3113_RS11615 PF03795 YCII-related domain F3113_RS11620 PF03544 Gram-negative bacterial TonB protein C-terminal F3113_RS11625 PF03061 Thioesterase superfamily F3113_RS11630 PF04279 Intracellular septation protein A F3113_RS11640 PF03922 OmpW family F3113_RS11645 PF01709 Transcriptional regulator F3113_RS11660 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS11665 PF00290 Tryptophan synthase alpha chain F3113_RS11670 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS11675 PF00218 Indole-3-glycerol phosphate synthase F3113_RS11675 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase F3113_RS11680 PF00591 Glycosyl transferase family, a/b domain F3113_RS11680 PF00117 Glutamine amidotransferase class-I F3113_RS11680 PF02885 Glycosyl transferase family, helical bundle domain F3113_RS11685 PF04715 Anthranilate synthase component I, N terminal region F3113_RS11685 PF00425 chorismate binding enzyme F3113_RS11695 PF02811 PHP domain F3113_RS11700 PF01300 Telomere recombination F3113_RS11705 PF01479 S4 domain F3113_RS11705 PF00849 RNA pseudouridylate synthase F3113_RS11710 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F3113_RS11715 PF00106 short chain dehydrogenase F3113_RS11720 PF08496 Peptidase family S49 N-terminal F3113_RS11720 PF01343 Peptidase family S49 F3113_RS11725 PF10692 Protein of unknown function (DUF2498) F3113_RS11730 PF08272 Topoisomerase I zinc-ribbon-like F3113_RS11730 PF01131 DNA topoisomerase F3113_RS11730 PF01751 Toprim domain F3113_RS11730 PF01396 Topoisomerase DNA binding C4 zinc finger F3113_RS11735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS11735 PF03466 LysR substrate binding domain F3113_RS11750 PF00330 Aconitase family (aconitate hydratase) F3113_RS11750 PF00694 Aconitase C-terminal domain F3113_RS11755 PF00925 GTP cyclohydrolase II F3113_RS11760 PF01569 PAP2 superfamily F3113_RS11765 PF06305 Lipopolysaccharide assembly protein A domain F3113_RS11770 PF18073 Rubredoxin metal binding domain F3113_RS11775 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3113_RS11780 PF01253 Translation initiation factor SUI1 F3113_RS11785 PF05433 Glycine zipper 2TM domain F3113_RS11790 PF08220 DeoR-like helix-turn-helix domain F3113_RS11790 PF00455 DeoR C terminal sensor domain F3113_RS11800 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS11800 PF13426 PAS domain F3113_RS11800 PF00563 EAL domain F3113_RS11805 PF17876 Cold shock domain F3113_RS11805 PF08206 Ribonuclease B OB domain F3113_RS11805 PF00575 S1 RNA binding domain F3113_RS11805 PF00773 RNB domain F3113_RS11825 PF00005 ABC transporter F3113_RS11830 PF00005 ABC transporter F3113_RS11830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS11835 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS11835 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS11845 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS11860 PF02954 Bacterial regulatory protein, Fis family F3113_RS11860 PF00158 Sigma-54 interaction domain F3113_RS11865 PF04012 PspA/IM30 family F3113_RS11870 PF06667 Phage shock protein B F3113_RS11875 PF04024 PspC domain F3113_RS11880 PF09584 Phage shock protein PspD (Phageshock_PspD) F3113_RS11885 PF00128 Alpha amylase, catalytic domain F3113_RS11890 PF01547 Bacterial extracellular solute-binding protein F3113_RS11895 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS11900 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS11905 PF00107 Zinc-binding dehydrogenase F3113_RS11910 PF01261 Xylose isomerase-like TIM barrel F3113_RS11915 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS11915 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3113_RS11920 PF03632 Glycosyl hydrolase family 65 central catalytic domain F3113_RS11920 PF03633 Glycosyl hydrolase family 65, C-terminal domain F3113_RS11920 PF03636 Glycosyl hydrolase family 65, N-terminal domain F3113_RS11925 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS11930 PF03459 TOBE domain F3113_RS11930 PF17912 MalK OB fold domain F3113_RS11930 PF00005 ABC transporter F3113_RS11935 PF09381 Outer membrane protein G (OmpG) F3113_RS11940 PF00356 Bacterial regulatory proteins, lacI family F3113_RS11940 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS11945 PF00581 Rhodanese-like domain F3113_RS11950 PF04317 YcjX-like family, DUF463 F3113_RS11955 PF05128 Domain of unknown function (DUF697) F3113_RS11960 PF18024 Helix-turn-helix domain F3113_RS11960 PF00158 Sigma-54 interaction domain F3113_RS11965 PF08534 Redoxin F3113_RS11970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3113_RS11970 PF13378 Enolase C-terminal domain-like F3113_RS11975 PF00246 Zinc carboxypeptidase F3113_RS11980 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS12000 PF08220 DeoR-like helix-turn-helix domain F3113_RS12000 PF00455 DeoR C terminal sensor domain F3113_RS12005 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3113_RS12015 PF00107 Zinc-binding dehydrogenase F3113_RS12015 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS12020 PF00924 Mechanosensitive ion channel F3113_RS12025 PF10749 Protein of unknown function (DUF2534) F3113_RS12030 PF00582 Universal stress protein family F3113_RS12035 PF13545 Crp-like helix-turn-helix domain F3113_RS12035 PF00027 Cyclic nucleotide-binding domain F3113_RS12040 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain F3113_RS12040 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3113_RS12045 PF01713 Smr domain F3113_RS12050 PF08448 PAS fold F3113_RS12050 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS12055 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS12055 PF00563 EAL domain F3113_RS12055 PF03707 Bacterial signalling protein N terminal repeat F3113_RS12060 PF00672 HAMP domain F3113_RS12060 PF02203 Tar ligand binding domain homologue F3113_RS12060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS12065 PF01544 CorA-like Mg2+ transporter protein F3113_RS12070 PF03880 DbpA RNA binding domain F3113_RS12070 PF00271 Helicase conserved C-terminal domain F3113_RS12070 PF00270 DEAD/DEAH box helicase F3113_RS12075 PF01171 PP-loop family F3113_RS12080 PF00582 Universal stress protein family F3113_RS12090 PF00267 Gram-negative porin F3113_RS12095 PF10371 Domain of unknown function F3113_RS12095 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II F3113_RS12095 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS12095 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase F3113_RS12095 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg F3113_RS12100 PF03891 Domain of unknown function (DUF333) F3113_RS12105 PF03724 META domain F3113_RS12110 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain F3113_RS12110 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3113_RS12115 PF11739 Dicarboxylate transport F3113_RS12120 PF13617 YnbE-like lipoprotein F3113_RS12125 PF07027 Protein of unknown function (DUF1318) F3113_RS12135 PF02525 Flavodoxin-like fold F3113_RS12140 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold F3113_RS12140 PF00271 Helicase conserved C-terminal domain F3113_RS12140 PF11898 Domain of unknown function (DUF3418) F3113_RS12140 PF00270 DEAD/DEAH box helicase F3113_RS12140 PF04408 Helicase associated domain (HA2) F3113_RS12145 PF02698 DUF218 domain F3113_RS12150 PF00171 Aldehyde dehydrogenase family F3113_RS12155 PF13472 GDSL-like Lipase/Acylhydrolase family F3113_RS12155 PF07859 alpha/beta hydrolase fold F3113_RS12160 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3113_RS12160 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3113_RS12165 PF01292 Prokaryotic cytochrome b561 F3113_RS12170 PF00717 Peptidase S24-like F3113_RS12175 PF13438 Domain of unknown function (DUF4113) F3113_RS12175 PF11798 IMS family HHH motif F3113_RS12175 PF11799 impB/mucB/samB family C-terminal domain F3113_RS12175 PF00817 impB/mucB/samB family F3113_RS12180 PF01292 Prokaryotic cytochrome b561 F3113_RS12185 PF13247 4Fe-4S dicluster domain F3113_RS12185 PF12800 4Fe-4S binding domain F3113_RS12185 PF09163 Formate dehydrogenase N, transmembrane F3113_RS12190 PF00384 Molybdopterin oxidoreductase F3113_RS12190 PF01568 Molydopterin dinucleotide binding domain F3113_RS12190 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS12200 PF04224 Protein of unknown function, DUF417 F3113_RS12205 PF03625 Domain of unknown function DUF302 F3113_RS12205 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F3113_RS12210 PF02583 Metal-sensitive transcriptional repressor F3113_RS12215 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS12215 PF00107 Zinc-binding dehydrogenase F3113_RS12220 PF00672 HAMP domain F3113_RS12220 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS12220 PF02203 Tar ligand binding domain homologue F3113_RS12245 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS12245 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS12255 PF03466 LysR substrate binding domain F3113_RS12255 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS12265 PF07063 Domain of unknown function (DUF1338) F3113_RS12270 PF04349 Periplasmic glucan biosynthesis protein, MdoG F3113_RS12275 PF04325 Protein of unknown function (DUF465) F3113_RS12280 PF01168 Alanine racemase, N-terminal domain F3113_RS12280 PF00842 Alanine racemase, C-terminal domain F3113_RS12285 PF13302 Acetyltransferase (GNAT) domain F3113_RS12290 PF18836 Beta solenoid repeat from YDCK F3113_RS12295 PF03595 Voltage-dependent anion channel F3113_RS12300 PF03848 Tellurite resistance protein TehB F3113_RS12305 PF11769 Protein of unknown function (DUF3313) F3113_RS12310 PF00892 EamA-like transporter family F3113_RS12320 PF03594 Benzoate membrane transport protein F3113_RS12325 PF07883 Cupin domain F3113_RS12325 PF01381 Helix-turn-helix F3113_RS12330 PF12392 Collagenase F3113_RS12330 PF01136 Peptidase family U32 F3113_RS12345 PF02322 Cytochrome bd terminal oxidase subunit II F3113_RS12350 PF01654 Cytochrome bd terminal oxidase subunit I F3113_RS12360 PF00392 Bacterial regulatory proteins, gntR family F3113_RS12360 PF00155 Aminotransferase class I and II F3113_RS12365 PF13416 Bacterial extracellular solute-binding protein F3113_RS12370 PF08402 TOBE domain F3113_RS12370 PF00005 ABC transporter F3113_RS12375 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS12380 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS12385 PF00171 Aldehyde dehydrogenase family F3113_RS12400 PF10753 Toxin GhoT_OrtT F3113_RS12420 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS12425 PF10735 Protein of unknown function (DUF2526) F3113_RS12430 PF04657 Putative inner membrane exporter, YdcZ F3113_RS12435 PF00583 Acetyltransferase (GNAT) family F3113_RS12440 PF08671 Anti-repressor SinI F3113_RS12440 PF01381 Helix-turn-helix F3113_RS12445 PF00107 Zinc-binding dehydrogenase F3113_RS12445 PF16884 N-terminal domain of oxidoreductase F3113_RS12455 PF06004 Bacterial protein of unknown function (DUF903) F3113_RS12460 PF00324 Amino acid permease F3113_RS12465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS12465 PF08447 PAS fold F3113_RS12470 PF00296 Luciferase-like monooxygenase F3113_RS12475 PF07687 Peptidase dimerisation domain F3113_RS12475 PF01546 Peptidase family M20/M25/M40 F3113_RS12480 PF00296 Luciferase-like monooxygenase F3113_RS12485 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS12485 PF01464 Transglycosylase SLT domain F3113_RS12495 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS12500 PF00005 ABC transporter F3113_RS12505 PF00550 Phosphopantetheine attachment site F3113_RS12505 PF14765 Polyketide synthase dehydratase F3113_RS12505 PF00109 Beta-ketoacyl synthase, N-terminal domain F3113_RS12505 PF02801 Beta-ketoacyl synthase, C-terminal domain F3113_RS12505 PF08659 KR domain F3113_RS12505 PF16197 Ketoacyl-synthetase C-terminal extension F3113_RS12505 PF00698 Acyl transferase domain F3113_RS12505 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS12510 PF03466 LysR substrate binding domain F3113_RS12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS12515 PF13417 Glutathione S-transferase, N-terminal domain F3113_RS12525 PF01361 Tautomerase enzyme F3113_RS12530 PF01613 Flavin reductase like domain F3113_RS12535 PF00797 N-acetyltransferase F3113_RS12555 PF02567 Phenazine biosynthesis-like protein F3113_RS12560 PF02665 Nitrate reductase gamma subunit F3113_RS12565 PF02613 Nitrate reductase delta subunit F3113_RS12570 PF13247 4Fe-4S dicluster domain F3113_RS12570 PF14711 Respiratory nitrate reductase beta C-terminal F3113_RS12575 PF14710 Respiratory nitrate reductase alpha N-terminal F3113_RS12575 PF01568 Molydopterin dinucleotide binding domain F3113_RS12575 PF00384 Molybdopterin oxidoreductase F3113_RS12580 PF07690 Major Facilitator Superfamily F3113_RS12590 PF07690 Major Facilitator Superfamily F3113_RS12600 PF00267 Gram-negative porin F3113_RS12605 PF05598 Transposase domain (DUF772) F3113_RS12605 PF01609 Transposase DDE domain F3113_RS12610 PF00892 EamA-like transporter family F3113_RS12620 PF09163 Formate dehydrogenase N, transmembrane F3113_RS12620 PF12800 4Fe-4S binding domain F3113_RS12620 PF13247 4Fe-4S dicluster domain F3113_RS12625 PF01292 Prokaryotic cytochrome b561 F3113_RS12630 PF00719 Inorganic pyrophosphatase F3113_RS12635 PF00005 ABC transporter F3113_RS12635 PF12848 ABC transporter F3113_RS12640 PF03949 Malic enzyme, NAD binding domain F3113_RS12640 PF00390 Malic enzyme, N-terminal domain F3113_RS12645 PF08136 30S ribosomal protein subunit S22 family F3113_RS12650 PF02566 OsmC-like protein F3113_RS12655 PF00106 short chain dehydrogenase F3113_RS12665 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3113_RS12665 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3113_RS12670 PF02803 Thiolase, C-terminal domain F3113_RS12670 PF00108 Thiolase, N-terminal domain F3113_RS12675 PF01144 Coenzyme A transferase F3113_RS12680 PF01144 Coenzyme A transferase F3113_RS12685 PF03466 LysR substrate binding domain F3113_RS12685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS12690 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS12690 PF00005 ABC transporter F3113_RS12695 PF00005 ABC transporter F3113_RS12695 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS12700 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS12700 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS12705 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS12710 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS12715 PF01427 D-ala-D-ala dipeptidase F3113_RS12725 PF06411 HdeA/HdeB family F3113_RS12730 PF00672 HAMP domain F3113_RS12730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS12730 PF02203 Tar ligand binding domain homologue F3113_RS12750 PF02638 Glycosyl hydrolase-like 10 F3113_RS12755 PF09905 DNA-binding protein VF530 F3113_RS12760 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS12765 PF00005 ABC transporter F3113_RS12765 PF00664 ABC transporter transmembrane region F3113_RS12780 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS12780 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS12785 PF00577 Outer membrane usher protein F3113_RS12785 PF13954 PapC N-terminal domain F3113_RS12785 PF13953 PapC C-terminal domain F3113_RS12795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS12795 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS12810 PF13302 Acetyltransferase (GNAT) domain F3113_RS12815 PF13649 Methyltransferase domain F3113_RS12825 PF01062 Bestrophin, RFP-TM, chloride channel F3113_RS12830 PF08125 Mannitol dehydrogenase C-terminal domain F3113_RS12830 PF01232 Mannitol dehydrogenase Rossmann domain F3113_RS12840 PF13811 Domain of unknown function (DUF4186) F3113_RS12845 PF04960 Glutaminase F3113_RS12850 PF02203 Tar ligand binding domain homologue F3113_RS12850 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS12850 PF00672 HAMP domain F3113_RS12855 PF00171 Aldehyde dehydrogenase family F3113_RS12860 PF03466 LysR substrate binding domain F3113_RS12860 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS12865 PF07690 Major Facilitator Superfamily F3113_RS12870 PF01914 MarC family integral membrane protein F3113_RS12875 PF01047 MarR family F3113_RS12880 PF12833 Helix-turn-helix domain F3113_RS12885 PF13999 MarB protein F3113_RS12890 PF00892 EamA-like transporter family F3113_RS12895 PF07690 Major Facilitator Superfamily F3113_RS12900 PF00005 ABC transporter F3113_RS12905 PF00005 ABC transporter F3113_RS12910 PF02653 Branched-chain amino acid transport system / permease component F3113_RS12915 PF02653 Branched-chain amino acid transport system / permease component F3113_RS12920 PF02954 Bacterial regulatory protein, Fis family F3113_RS12920 PF13188 PAS domain F3113_RS12920 PF00158 Sigma-54 interaction domain F3113_RS12930 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS12940 PF01432 Peptidase family M3 F3113_RS12945 PF00106 short chain dehydrogenase F3113_RS12950 PF00392 Bacterial regulatory proteins, gntR family F3113_RS12950 PF07729 FCD domain F3113_RS12955 PF14001 YdfZ protein F3113_RS12960 PF08125 Mannitol dehydrogenase C-terminal domain F3113_RS12960 PF01232 Mannitol dehydrogenase Rossmann domain F3113_RS12965 PF00083 Sugar (and other) transporter F3113_RS12970 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain F3113_RS12970 PF13378 Enolase C-terminal domain-like F3113_RS12975 PF02694 Uncharacterised BCR, YnfA/UPF0060 family F3113_RS12980 PF06932 Protein of unknown function (DUF1283) F3113_RS12985 PF13302 Acetyltransferase (GNAT) domain F3113_RS12990 PF06788 Uncharacterised protein family (UPF0257) F3113_RS12995 PF06649 Protein of unknown function (DUF1161) F3113_RS13000 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS13000 PF00384 Molybdopterin oxidoreductase F3113_RS13000 PF01568 Molydopterin dinucleotide binding domain F3113_RS13005 PF13247 4Fe-4S dicluster domain F3113_RS13005 PF12800 4Fe-4S binding domain F3113_RS13010 PF04976 DMSO reductase anchor subunit (DmsC) F3113_RS13015 PF02613 Nitrate reductase delta subunit F3113_RS13020 PF00654 Voltage gated chloride channel F3113_RS13030 PF00480 ROK family F3113_RS13035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS13035 PF03466 LysR substrate binding domain F3113_RS13040 PF07690 Major Facilitator Superfamily F3113_RS13045 PF02517 CPBP intramembrane metalloprotease F3113_RS13050 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS13050 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS13055 PF00072 Response regulator receiver domain F3113_RS13055 PF00486 Transcriptional regulatory protein, C terminal F3113_RS13060 PF00174 Oxidoreductase molybdopterin binding domain F3113_RS13065 PF01794 Ferric reductase like transmembrane component F3113_RS13070 PF02074 Carboxypeptidase Taq (M32) metallopeptidase F3113_RS13080 PF00089 Trypsin F3113_RS13085 PF00893 Small Multidrug Resistance protein F3113_RS13090 PF00893 Small Multidrug Resistance protein F3113_RS13095 PF01594 AI-2E family transporter F3113_RS13100 PF02233 NAD(P) transhydrogenase beta subunit F3113_RS13105 PF01262 Alanine dehydrogenase/PNT, C-terminal domain F3113_RS13105 PF05222 Alanine dehydrogenase/PNT, N-terminal domain F3113_RS13105 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch F3113_RS13110 PF07338 Protein of unknown function (DUF1471) F3113_RS13115 PF13520 Amino acid permease F3113_RS13125 PF06942 GlpM protein F3113_RS13130 PF00486 Transcriptional regulatory protein, C terminal F3113_RS13130 PF00072 Response regulator receiver domain F3113_RS13135 PF00375 Sodium:dicarboxylate symporter family F3113_RS13140 PF03824 High-affinity nickel-transport protein F3113_RS13145 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase F3113_RS13160 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS13160 PF00672 HAMP domain F3113_RS13165 PF05472 DNA replication terminus site-binding protein (Ter protein) F3113_RS13170 PF00206 Lyase F3113_RS13170 PF10415 Fumarase C C-terminus F3113_RS13175 PF05681 Fumarate hydratase (Fumerase) F3113_RS13175 PF05683 Fumarase C-terminus F3113_RS13180 PF01238 Phosphomannose isomerase type I F3113_RS13185 PF06097 Bacterial protein of unknown function (DUF945) F3113_RS13190 PF00356 Bacterial regulatory proteins, lacI family F3113_RS13190 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS13195 PF00367 phosphotransferase system, EIIB F3113_RS13195 PF02378 Phosphotransferase system, EIIC F3113_RS13200 PF00155 Aminotransferase class I and II F3113_RS13205 PF00962 Adenosine/AMP deaminase F3113_RS13210 PF02894 Oxidoreductase family, C-terminal alpha/beta domain F3113_RS13210 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS13220 PF05321 Haemolysin expression modulating protein F3113_RS13225 PF10754 Protein of unknown function (DUF2569) F3113_RS13230 PF02508 Rnf-Nqr subunit, membrane protein F3113_RS13235 PF04060 Putative Fe-S cluster F3113_RS13240 PF13375 RnfC Barrel sandwich hybrid domain F3113_RS13240 PF12838 4Fe-4S dicluster domain F3113_RS13240 PF10531 SLBB domain F3113_RS13240 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit F3113_RS13245 PF03116 NQR2, RnfD, RnfE family F3113_RS13250 PF04205 FMN-binding domain F3113_RS13255 PF02508 Rnf-Nqr subunit, membrane protein F3113_RS13260 PF10576 Iron-sulfur binding domain of endonuclease III F3113_RS13260 PF00730 HhH-GPD superfamily base excision DNA repair protein F3113_RS13260 PF00633 Helix-hairpin-helix motif F3113_RS13265 PF00854 POT family F3113_RS13270 PF02798 Glutathione S-transferase, N-terminal domain F3113_RS13270 PF00043 Glutathione S-transferase, C-terminal domain F3113_RS13275 PF08543 Phosphomethylpyrimidine kinase F3113_RS13280 PF00579 tRNA synthetases class I (W and Y) F3113_RS13280 PF01479 S4 domain F3113_RS13285 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region F3113_RS13285 PF01243 Pyridoxamine 5'-phosphate oxidase F3113_RS13290 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme F3113_RS13295 PF03702 Anhydro-N-acetylmuramic acid kinase F3113_RS13300 PF05433 Glycine zipper 2TM domain F3113_RS13305 PF01047 MarR family F3113_RS13310 PF07869 Protein of unknown function (DUF1656) F3113_RS13315 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS13315 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS13320 PF04632 Fusaric acid resistance protein family F3113_RS13325 PF00080 Copper/zinc superoxide dismutase (SODC) F3113_RS13330 PF00248 Aldo/keto reductase family F3113_RS13335 PF06945 Protein of unknown function (DUF1289) F3113_RS13340 PF16925 Tetracyclin repressor-like, C-terminal domain F3113_RS13340 PF00440 Bacterial regulatory proteins, tetR family F3113_RS13345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family F3113_RS13350 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3113_RS13355 PF00929 Exonuclease F3113_RS13360 PF00462 Glutaredoxin F3113_RS13365 PF00877 NlpC/P60 family F3113_RS13370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3113_RS13370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3113_RS13375 PF07690 Major Facilitator Superfamily F3113_RS13385 PF00356 Bacterial regulatory proteins, lacI family F3113_RS13390 PF03466 LysR substrate binding domain F3113_RS13390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS13395 PF07690 Major Facilitator Superfamily F3113_RS13405 PF00677 Lumazine binding domain F3113_RS13410 PF01554 MatE F3113_RS13415 PF00849 RNA pseudouridylate synthase F3113_RS13420 PF02567 Phenazine biosynthesis-like protein F3113_RS13425 PF08803 Putative mono-oxygenase ydhR F3113_RS13430 PF01042 Endoribonuclease L-PSP F3113_RS13435 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS13450 PF00563 EAL domain F3113_RS13450 PF13188 PAS domain F3113_RS13450 PF03707 Bacterial signalling protein N terminal repeat F3113_RS13450 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS13455 PF00255 Glutathione peroxidase F3113_RS13460 PF01594 AI-2E family transporter F3113_RS13465 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS13470 PF00579 tRNA synthetases class I (W and Y) F3113_RS13515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS13520 PF13953 PapC C-terminal domain F3113_RS13520 PF00577 Outer membrane usher protein F3113_RS13520 PF13954 PapC N-terminal domain F3113_RS13535 PF12833 Helix-turn-helix domain F3113_RS13535 PF01965 DJ-1/PfpI family F3113_RS13540 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3113_RS13540 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3113_RS13565 PF00005 ABC transporter F3113_RS13570 PF01032 FecCD transport family F3113_RS13575 PF01497 Periplasmic binding protein F3113_RS13580 PF00202 Aminotransferase class-III F3113_RS13585 PF00155 Aminotransferase class I and II F3113_RS13585 PF00392 Bacterial regulatory proteins, gntR family F3113_RS13590 PF00034 Cytochrome c F3113_RS13590 PF13442 Cytochrome C oxidase, cbb3-type, subunit III F3113_RS13605 PF00171 Aldehyde dehydrogenase family F3113_RS13620 PF00324 Amino acid permease F3113_RS13630 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS13635 PF00005 ABC transporter F3113_RS13640 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS13645 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS13655 PF01292 Prokaryotic cytochrome b561 F3113_RS13660 PF13247 4Fe-4S dicluster domain F3113_RS13670 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain F3113_RS13670 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 F3113_RS13675 PF13247 4Fe-4S dicluster domain F3113_RS13675 PF12800 4Fe-4S binding domain F3113_RS13680 PF10965 Protein of unknown function (DUF2767) F3113_RS13685 PF00072 Response regulator receiver domain F3113_RS13685 PF00196 Bacterial regulatory proteins, luxR family F3113_RS13690 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS13690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS13695 PF13247 4Fe-4S dicluster domain F3113_RS13700 PF03916 Polysulphide reductase, NrfD F3113_RS13705 PF00384 Molybdopterin oxidoreductase F3113_RS13705 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS13705 PF01568 Molydopterin dinucleotide binding domain F3113_RS13725 PF00144 Beta-lactamase F3113_RS13730 PF03180 NLPA lipoprotein F3113_RS13735 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS13740 PF09383 NIL domain F3113_RS13740 PF00005 ABC transporter F3113_RS13755 PF00561 alpha/beta hydrolase fold F3113_RS13760 PF00324 Amino acid permease F3113_RS13765 PF02887 Pyruvate kinase, alpha/beta domain F3113_RS13765 PF00224 Pyruvate kinase, barrel domain F3113_RS13770 PF04728 Lipoprotein leucine-zipper F3113_RS13775 PF17969 L,D-transpeptidase C-terminal domain F3113_RS13775 PF03734 L,D-transpeptidase catalytic domain F3113_RS13775 PF01476 LysM domain F3113_RS13780 PF02657 Fe-S metabolism associated domain F3113_RS13785 PF00266 Aminotransferase class-V F3113_RS13790 PF01458 Uncharacterized protein family (UPF0051) F3113_RS13795 PF00005 ABC transporter F3113_RS13800 PF01458 Uncharacterized protein family (UPF0051) F3113_RS13805 PF01521 Iron-sulphur cluster biosynthesis F3113_RS13810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS13810 PF03466 LysR substrate binding domain F3113_RS13820 PF15930 Domain of unknown function F3113_RS13825 PF03061 Thioesterase superfamily F3113_RS13830 PF02913 FAD linked oxidases, C-terminal domain F3113_RS13830 PF01565 FAD binding domain F3113_RS13830 PF13183 4Fe-4S dicluster domain F3113_RS13835 PF01594 AI-2E family transporter F3113_RS13845 PF08965 Domain of unknown function (DUF1870) F3113_RS13850 PF07690 Major Facilitator Superfamily F3113_RS13855 PF07690 Major Facilitator Superfamily F3113_RS13860 PF08501 Shikimate dehydrogenase substrate binding domain F3113_RS13860 PF18317 Shikimate 5'-dehydrogenase C-terminal domain F3113_RS13865 PF01487 Type I 3-dehydroquinase F3113_RS13870 PF01144 Coenzyme A transferase F3113_RS13875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3113_RS13875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3113_RS13875 PF02770 Acyl-CoA dehydrogenase, middle domain F3113_RS13880 PF12833 Helix-turn-helix domain F3113_RS13880 PF02311 AraC-like ligand binding domain F3113_RS13885 PF01012 Electron transfer flavoprotein domain F3113_RS13890 PF01012 Electron transfer flavoprotein domain F3113_RS13890 PF00766 Electron transfer flavoprotein FAD-binding domain F3113_RS13895 PF01494 FAD binding domain F3113_RS13905 PF00501 AMP-binding enzyme F3113_RS13905 PF13193 AMP-binding enzyme C-terminal domain F3113_RS13910 PF02896 PEP-utilising enzyme, TIM barrel domain F3113_RS13910 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain F3113_RS13910 PF00391 PEP-utilising enzyme, mobile domain F3113_RS13915 PF03618 Kinase/pyrophosphorylase F3113_RS13920 PF00793 DAHP synthetase I family F3113_RS13925 PF10636 Hemin uptake protein hemP F3113_RS13930 PF00593 TonB dependent receptor F3113_RS13930 PF07715 TonB-dependent Receptor Plug Domain F3113_RS13935 PF05171 Haemin-degrading HemS.ChuX domain F3113_RS13940 PF01497 Periplasmic binding protein F3113_RS13945 PF01032 FecCD transport family F3113_RS13950 PF00005 ABC transporter F3113_RS13955 PF02696 Uncharacterized ACR, YdiU/UPF0061 family F3113_RS13960 PF00563 EAL domain F3113_RS13965 PF00877 NlpC/P60 family F3113_RS13970 PF00005 ABC transporter F3113_RS13975 PF00255 Glutathione peroxidase F3113_RS13980 PF01032 FecCD transport family F3113_RS13985 PF00216 Bacterial DNA-binding protein F3113_RS13990 PF01588 Putative tRNA binding domain F3113_RS13990 PF03483 B3/4 domain F3113_RS13990 PF03484 tRNA synthetase B5 domain F3113_RS13990 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain F3113_RS13990 PF03147 Ferredoxin-fold anticodon binding domain F3113_RS13995 PF01409 tRNA synthetases class II core domain (F) F3113_RS13995 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain F3113_RS14005 PF00453 Ribosomal protein L20 F3113_RS14010 PF01632 Ribosomal protein L35 F3113_RS14015 PF00707 Translation initiation factor IF-3, C-terminal domain F3113_RS14015 PF05198 Translation initiation factor IF-3, N-terminal domain F3113_RS14020 PF02824 TGS domain F3113_RS14020 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3113_RS14020 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain F3113_RS14020 PF03129 Anticodon binding domain F3113_RS14030 PF04338 Protein of unknown function, DUF481 F3113_RS14035 PF00294 pfkB family carbohydrate kinase F3113_RS14040 PF03881 Fructosamine kinase F3113_RS14045 PF14002 YniB-like protein F3113_RS14050 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS14060 PF04307 LexA-binding, inner membrane-associated putative hydrolase F3113_RS14065 PF00375 Sodium:dicarboxylate symporter family F3113_RS14070 PF10729 Cell division activator CedA F3113_RS14075 PF06628 Catalase-related immune-responsive F3113_RS14075 PF18011 C-terminal domain found in long catalases F3113_RS14075 PF00199 Catalase F3113_RS14080 PF04794 YdjC-like protein F3113_RS14085 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3113_RS14085 PF02056 Family 4 glycosyl hydrolase F3113_RS14090 PF12833 Helix-turn-helix domain F3113_RS14090 PF07883 Cupin domain F3113_RS14095 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3113_RS14100 PF02378 Phosphotransferase system, EIIC F3113_RS14105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS14110 PF04355 SmpA / OmlA family F3113_RS14115 PF02540 NAD synthase F3113_RS14125 PF05962 HutD F3113_RS14130 PF07813 LTXXQ motif family protein F3113_RS14135 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family F3113_RS14140 PF04996 Succinylarginine dihydrolase F3113_RS14145 PF00171 Aldehyde dehydrogenase family F3113_RS14150 PF04958 Arginine N-succinyltransferase beta subunit F3113_RS14155 PF00202 Aminotransferase class-III F3113_RS14160 PF03372 Endonuclease/Exonuclease/phosphatase family F3113_RS14165 PF09335 SNARE associated Golgi protein F3113_RS14170 PF09335 SNARE associated Golgi protein F3113_RS14175 PF13416 Bacterial extracellular solute-binding protein F3113_RS14180 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS14185 PF00005 ABC transporter F3113_RS14190 PF00581 Rhodanese-like domain F3113_RS14195 PF01066 CDP-alcohol phosphatidyltransferase F3113_RS14200 PF02627 Carboxymuconolactone decarboxylase family F3113_RS14205 PF00293 NUDIX domain F3113_RS14210 PF07383 Protein of unknown function (DUF1496) F3113_RS14215 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase F3113_RS14215 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain F3113_RS14220 PF01131 DNA topoisomerase F3113_RS14220 PF01751 Toprim domain F3113_RS14225 PF02769 AIR synthase related protein, C-terminal domain F3113_RS14225 PF00586 AIR synthase related protein, N-terminal domain F3113_RS14230 PF00881 Nitroreductase family F3113_RS14235 PF01343 Peptidase family S49 F3113_RS14240 PF00710 Asparaginase, N-terminal F3113_RS14240 PF17763 Glutaminase/Asparaginase C-terminal domain F3113_RS14245 PF00857 Isochorismatase family F3113_RS14250 PF00083 Sugar (and other) transporter F3113_RS14255 PF00455 DeoR C terminal sensor domain F3113_RS14255 PF08220 DeoR-like helix-turn-helix domain F3113_RS14260 PF00248 Aldo/keto reductase family F3113_RS14265 PF00294 pfkB family carbohydrate kinase F3113_RS14270 PF01116 Fructose-bisphosphate aldolase class-II F3113_RS14275 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS14275 PF00107 Zinc-binding dehydrogenase F3113_RS14280 PF00083 Sugar (and other) transporter F3113_RS14285 PF00107 Zinc-binding dehydrogenase F3113_RS14285 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS14290 PF00041 Fibronectin type III domain F3113_RS14290 PF00704 Glycosyl hydrolases family 18 F3113_RS14295 PF01844 HNH endonuclease F3113_RS14300 PF07023 Protein of unknown function (DUF1315) F3113_RS14305 PF01641 SelR domain F3113_RS14310 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain F3113_RS14310 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain F3113_RS14315 PF01263 Aldose 1-epimerase F3113_RS14320 PF00248 Aldo/keto reductase family F3113_RS14325 PF06629 MltA-interacting protein MipA F3113_RS14330 PF06798 PrkA serine protein kinase C-terminal domain F3113_RS14330 PF08298 PrkA AAA domain F3113_RS14335 PF04285 Protein of unknown function (DUF444) F3113_RS14340 PF13649 Methyltransferase domain F3113_RS14345 PF17155 Gammaproteobacterial periplasmic sensor domain F3113_RS14345 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS14350 PF04073 Aminoacyl-tRNA editing domain F3113_RS14355 PF04284 Protein of unknown function (DUF441) F3113_RS14360 PF12833 Helix-turn-helix domain F3113_RS14360 PF02311 AraC-like ligand binding domain F3113_RS14365 PF07690 Major Facilitator Superfamily F3113_RS14370 PF06418 CTP synthase N-terminus F3113_RS14370 PF00117 Glutamine amidotransferase class-I F3113_RS14375 PF04343 Protein of unknown function, DUF488 F3113_RS14380 PF03891 Domain of unknown function (DUF333) F3113_RS14385 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS14385 PF13185 GAF domain F3113_RS14400 PF04226 Transglycosylase associated protein F3113_RS14405 PF01568 Molydopterin dinucleotide binding domain F3113_RS14405 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS14405 PF00384 Molybdopterin oxidoreductase F3113_RS14415 PF08956 Domain of unknown function (DUF1869) F3113_RS14420 PF09313 Domain of unknown function (DUF1971) F3113_RS14425 PF01810 LysE type translocator F3113_RS14430 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment F3113_RS14435 PF00005 ABC transporter F3113_RS14440 PF00005 ABC transporter F3113_RS14445 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS14445 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS14450 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS14455 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS14460 PF00593 TonB dependent receptor F3113_RS14460 PF07715 TonB-dependent Receptor Plug Domain F3113_RS14510 PF03960 ArsC family F3113_RS14515 PF02040 Arsenical pump membrane protein F3113_RS14520 PF01022 Bacterial regulatory protein, arsR family F3113_RS14525 PF03358 NADPH-dependent FMN reductase F3113_RS14530 PF00717 Peptidase S24-like F3113_RS14535 PF06183 DinI-like family F3113_RS14545 PF00180 Isocitrate/isopropylmalate dehydrogenase F3113_RS14550 PF00849 RNA pseudouridylate synthase F3113_RS14560 PF00293 NUDIX domain F3113_RS14570 PF04356 Protein of unknown function (DUF489) F3113_RS14575 PF00206 Lyase F3113_RS14575 PF08328 Adenylosuccinate lyase C-terminal F3113_RS14580 PF02586 SOS response associated peptidase (SRAP) F3113_RS14600 PF05717 IS66 Orf2 like protein F3113_RS14615 PF08349 Protein of unknown function (DUF1722) F3113_RS14650 PF00106 short chain dehydrogenase F3113_RS14660 PF13411 MerR HTH family regulatory protein F3113_RS14750 PF01343 Peptidase family S49 F3113_RS14765 PF03354 Phage Terminase F3113_RS14800 PF00313 'Cold-shock' DNA-binding domain F3113_RS14820 PF10721 Protein of unknown function (DUF2514) F3113_RS14825 PF00959 Phage lysozyme F3113_RS14855 PF05866 Endodeoxyribonuclease RusA F3113_RS14870 PF06183 DinI-like family F3113_RS14885 PF03960 ArsC family F3113_RS14890 PF02040 Arsenical pump membrane protein F3113_RS14895 PF02374 Anion-transporting ATPase F3113_RS14900 PF06953 Arsenical resistance operon trans-acting repressor ArsD F3113_RS14905 PF01022 Bacterial regulatory protein, arsR family F3113_RS14935 PF02082 Transcriptional regulator F3113_RS14940 PF12684 PDDEXK-like domain of unknown function (DUF3799) F3113_RS14940 PF06630 Enterobacterial exodeoxyribonuclease VIII F3113_RS14945 PF06806 Putative excisionase (DUF1233) F3113_RS14950 PF00589 Phage integrase family F3113_RS14950 PF12167 Arm DNA-binding domain F3113_RS14955 PF00072 Response regulator receiver domain F3113_RS14955 PF00486 Transcriptional regulatory protein, C terminal F3113_RS14960 PF08918 PhoQ Sensor F3113_RS14960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS14965 PF08007 Cupin superfamily protein F3113_RS14970 PF07687 Peptidase dimerisation domain F3113_RS14970 PF01546 Peptidase family M20/M25/M40 F3113_RS14975 PF08402 TOBE domain F3113_RS14975 PF00005 ABC transporter F3113_RS14980 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS14985 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS14990 PF13416 Bacterial extracellular solute-binding protein F3113_RS14995 PF02146 Sir2 family F3113_RS15000 PF00480 ROK family F3113_RS15005 PF02687 FtsX-like permease family F3113_RS15005 PF12704 MacB-like periplasmic core domain F3113_RS15010 PF00005 ABC transporter F3113_RS15015 PF02687 FtsX-like permease family F3113_RS15015 PF12704 MacB-like periplasmic core domain F3113_RS15020 PF01757 Acyltransferase family F3113_RS15025 PF03461 TRCF domain F3113_RS15025 PF00270 DEAD/DEAH box helicase F3113_RS15025 PF02559 CarD-like/TRCF domain F3113_RS15025 PF17757 UvrB interaction domain F3113_RS15025 PF00271 Helicase conserved C-terminal domain F3113_RS15030 PF17969 L,D-transpeptidase C-terminal domain F3113_RS15030 PF03734 L,D-transpeptidase catalytic domain F3113_RS15030 PF01476 LysM domain F3113_RS15035 PF07338 Protein of unknown function (DUF1471) F3113_RS15040 PF00440 Bacterial regulatory proteins, tetR family F3113_RS15045 PF00593 TonB dependent receptor F3113_RS15045 PF07715 TonB-dependent Receptor Plug Domain F3113_RS15050 PF05433 Glycine zipper 2TM domain F3113_RS15055 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS15060 PF05728 Uncharacterised protein family (UPF0227) F3113_RS15065 PF00933 Glycosyl hydrolase family 3 N terminal domain F3113_RS15070 PF01636 Phosphotransferase enzyme family F3113_RS15075 PF13036 Peptidoglycan-synthase activator LpoB F3113_RS15080 PF07233 Protein of unknown function (DUF1425) F3113_RS15085 PF01230 HIT domain F3113_RS15090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS15090 PF03466 LysR substrate binding domain F3113_RS15100 PF02769 AIR synthase related protein, C-terminal domain F3113_RS15100 PF00586 AIR synthase related protein, N-terminal domain F3113_RS15105 PF00708 Acylphosphatase F3113_RS15105 PF01300 Telomere recombination F3113_RS15105 PF17788 HypF Kae1-like domain F3113_RS15105 PF07503 HypF finger F3113_RS15110 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS15115 PF07690 Major Facilitator Superfamily F3113_RS15125 PF01554 MatE F3113_RS15135 PF03466 LysR substrate binding domain F3113_RS15135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS15140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS15140 PF03466 LysR substrate binding domain F3113_RS15155 PF10415 Fumarase C C-terminus F3113_RS15155 PF00206 Lyase F3113_RS15160 PF03466 LysR substrate binding domain F3113_RS15160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS15180 PF08281 Sigma-70, region 4 F3113_RS15180 PF04542 Sigma-70 region 2 F3113_RS15185 PF04773 FecR protein F3113_RS15185 PF16220 Domain of unknown function (DUF4880) F3113_RS15190 PF07660 Secretin and TonB N terminus short domain F3113_RS15190 PF07715 TonB-dependent Receptor Plug Domain F3113_RS15190 PF00593 TonB dependent receptor F3113_RS15195 PF01497 Periplasmic binding protein F3113_RS15200 PF01032 FecCD transport family F3113_RS15205 PF01032 FecCD transport family F3113_RS15210 PF00005 ABC transporter F3113_RS15235 PF07690 Major Facilitator Superfamily F3113_RS15235 PF00083 Sugar (and other) transporter F3113_RS15240 PF01048 Phosphorylase superfamily F3113_RS15240 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus F3113_RS15245 PF01321 Creatinase/Prolidase N-terminal domain F3113_RS15245 PF00557 Metallopeptidase family M24 F3113_RS15250 PF00367 phosphotransferase system, EIIB F3113_RS15250 PF02378 Phosphotransferase system, EIIC F3113_RS15255 PF01026 TatD related DNase F3113_RS15260 PF09115 DNA polymerase III, delta subunit, C terminal F3113_RS15265 PF02223 Thymidylate kinase F3113_RS15270 PF02618 YceG-like family F3113_RS15275 PF01063 Amino-transferase class IV F3113_RS15280 PF00109 Beta-ketoacyl synthase, N-terminal domain F3113_RS15280 PF02801 Beta-ketoacyl synthase, C-terminal domain F3113_RS15285 PF00550 Phosphopantetheine attachment site F3113_RS15295 PF00698 Acyl transferase domain F3113_RS15300 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III F3113_RS15300 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal F3113_RS15305 PF02504 Fatty acid synthesis protein F3113_RS15310 PF01783 Ribosomal L32p protein family F3113_RS15315 PF02620 Large ribosomal RNA subunit accumulation protein YceD F3113_RS15320 PF02545 Maf-like protein F3113_RS15325 PF01479 S4 domain F3113_RS15325 PF00849 RNA pseudouridylate synthase F3113_RS15330 PF12111 Polyribonucleotide phosphorylase C terminal F3113_RS15330 PF10150 Ribonuclease E/G family F3113_RS15330 PF00575 S1 RNA binding domain F3113_RS15335 PF03466 LysR substrate binding domain F3113_RS15335 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS15340 PF07690 Major Facilitator Superfamily F3113_RS15345 PF00669 Bacterial flagellin N-terminal helical region F3113_RS15350 PF00460 Flagella basal body rod protein F3113_RS15350 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3113_RS15355 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase F3113_RS15355 PF10135 Rod binding protein F3113_RS15360 PF02119 Flagellar P-ring protein F3113_RS15365 PF02107 Flagellar L-ring protein F3113_RS15370 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3113_RS15370 PF00460 Flagella basal body rod protein F3113_RS15375 PF00460 Flagella basal body rod protein F3113_RS15375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3113_RS15380 PF07559 Flagellar basal body protein FlaE F3113_RS15380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3113_RS15380 PF00460 Flagella basal body rod protein F3113_RS15385 PF03963 Flagellar hook capping protein - N-terminal region F3113_RS15385 PF13860 FlgD Ig-like domain F3113_RS15385 PF13861 FlgD Tudor-like domain F3113_RS15390 PF00460 Flagella basal body rod protein F3113_RS15390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal F3113_RS15395 PF00460 Flagella basal body rod protein F3113_RS15400 PF13144 Chaperone for flagella basal body P-ring formation F3113_RS15405 PF04316 Anti-sigma-28 factor, FlgM F3113_RS15410 PF05130 FlgN protein F3113_RS15415 PF03023 Lipid II flippase MurJ F3113_RS15420 PF01408 Oxidoreductase family, NAD-binding Rossmann fold F3113_RS15425 PF04337 Protein of unknown function, DUF480 F3113_RS15430 PF13302 Acetyltransferase (GNAT) domain F3113_RS15435 PF07690 Major Facilitator Superfamily F3113_RS15440 PF07273 Protein of unknown function (DUF1439) F3113_RS15445 PF01979 Amidohydrolase family F3113_RS15450 PF06183 DinI-like family F3113_RS15455 PF13991 BssS protein family F3113_RS15460 PF01266 FAD dependent oxidoreductase F3113_RS15465 PF10968 Protein of unknown function (DUF2770) F3113_RS15470 PF01292 Prokaryotic cytochrome b561 F3113_RS15475 PF04264 YceI-like domain F3113_RS15480 PF17773 UPF0176 acylphosphatase like domain F3113_RS15480 PF12368 Rhodanase C-terminal F3113_RS15480 PF00581 Rhodanese-like domain F3113_RS15485 PF03279 Bacterial lipid A biosynthesis acyltransferase F3113_RS15490 PF07690 Major Facilitator Superfamily F3113_RS15495 PF17158 Membrane-associated sensor, integral membrane domain F3113_RS15495 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS15500 PF13984 MsyB protein F3113_RS15505 PF07119 Protein of unknown function (DUF1375) F3113_RS15510 PF00535 Glycosyl transferase family 2 F3113_RS15515 PF04349 Periplasmic glucan biosynthesis protein, MdoG F3113_RS15520 PF01757 Acyltransferase family F3113_RS15530 PF01548 Transposase F3113_RS15530 PF02371 Transposase IS116/IS110/IS902 family F3113_RS15540 PF01661 Macro domain F3113_RS15550 PF10610 Thin aggregative fimbriae synthesis protein F3113_RS15555 PF07012 Curlin associated repeat F3113_RS15560 PF07012 Curlin associated repeat F3113_RS15565 PF00196 Bacterial regulatory proteins, luxR family F3113_RS15570 PF10627 Curli assembly protein CsgE F3113_RS15575 PF10614 Type VIII secretion system (T8SS), CsgF protein F3113_RS15580 PF03783 Curli production assembly/transport component CsgG F3113_RS15585 PF06496 Protein of unknown function (DUF1097) F3113_RS15590 PF02613 Nitrate reductase delta subunit F3113_RS15595 PF02811 PHP domain F3113_RS15600 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain F3113_RS15625 PF00892 EamA-like transporter family F3113_RS15630 PF04393 Protein of unknown function (DUF535) F3113_RS15635 PF02562 PhoH-like protein F3113_RS15640 PF04261 Dyp-type peroxidase family F3113_RS15645 PF13473 Cupredoxin-like domain F3113_RS15645 PF09375 Imelysin F3113_RS15650 PF03239 Iron permease FTR1 family F3113_RS15655 PF00474 Sodium:solute symporter family F3113_RS15660 PF01619 Proline dehydrogenase F3113_RS15660 PF00171 Aldehyde dehydrogenase family F3113_RS15660 PF14850 DNA-binding domain of Proline dehydrogenase F3113_RS15660 PF18327 Proline utilization A proline dehydrogenase N-terminal domain F3113_RS15665 PF07007 Lysozyme inhibitor LprI F3113_RS15670 PF00440 Bacterial regulatory proteins, tetR family F3113_RS15670 PF08362 YcdC-like protein, C-terminal region F3113_RS15680 PF10685 Stress-induced bacterial acidophilic repeat motif F3113_RS15685 PF02796 Helix-turn-helix domain of resolvase F3113_RS15685 PF00239 Resolvase, N terminal domain F3113_RS15690 PF02796 Helix-turn-helix domain of resolvase F3113_RS15690 PF00239 Resolvase, N terminal domain F3113_RS15735 PF00239 Resolvase, N terminal domain F3113_RS15735 PF07508 Recombinase F3113_RS15735 PF13408 Recombinase zinc beta ribbon domain F3113_RS15740 PF03358 NADPH-dependent FMN reductase F3113_RS15745 PF13993 YccJ-like protein F3113_RS15750 PF00328 Histidine phosphatase superfamily (branch 2) F3113_RS15775 PF02687 FtsX-like permease family F3113_RS15775 PF12704 MacB-like periplasmic core domain F3113_RS15775 PF00005 ABC transporter F3113_RS15785 PF00005 ABC transporter F3113_RS15785 PF12704 MacB-like periplasmic core domain F3113_RS15785 PF02687 FtsX-like permease family F3113_RS15795 PF10634 Fe2+ transport protein F3113_RS15800 PF03239 Iron permease FTR1 family F3113_RS15810 PF00578 AhpC/TSA family F3113_RS15815 PF13462 Thioredoxin F3113_RS15815 PF06965 Na+/H+ antiporter 1 F3113_RS15830 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3113_RS15835 PF01323 DSBA-like thioredoxin domain F3113_RS15840 PF01556 DnaJ C terminal domain F3113_RS15840 PF00226 DnaJ domain F3113_RS15855 PF03502 Nucleoside-specific channel-forming protein, Tsx F3113_RS15865 PF01048 Phosphorylase superfamily F3113_RS15880 PF01032 FecCD transport family F3113_RS15885 PF00005 ABC transporter F3113_RS15890 PF00127 Copper binding proteins, plastocyanin/azurin family F3113_RS15895 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal F3113_RS15895 PF00355 Rieske [2Fe-2S] domain F3113_RS15900 PF00033 Cytochrome b/b6/petB F3113_RS15900 PF02167 Cytochrome C1 family F3113_RS15900 PF00032 Cytochrome b(C-terminal)/b6/petD F3113_RS15905 PF02167 Cytochrome C1 family F3113_RS15915 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS15920 PF01027 Inhibitor of apoptosis-promoting Bax1 F3113_RS15925 PF04358 DsrC like protein F3113_RS15930 PF00708 Acylphosphatase F3113_RS15935 PF17785 PUA-like domain F3113_RS15935 PF10672 S-adenosylmethionine-dependent methyltransferase F3113_RS15940 PF08755 Hemimethylated DNA-binding protein YccV like F3113_RS15945 PF13380 CoA binding domain F3113_RS15950 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) F3113_RS15955 PF02142 MGS-like domain F3113_RS15960 PF13361 UvrD-like helicase C-terminal domain F3113_RS15960 PF00580 UvrD/REP helicase N-terminal domain F3113_RS15960 PF12462 DNA helicase IV / RNA helicase N terminal F3113_RS15965 PF03733 Inner membrane component domain F3113_RS15970 PF12805 FUSC-like inner membrane protein yccS F3113_RS15975 PF04994 TfoX C-terminal domain F3113_RS15975 PF04993 TfoX N-terminal domain F3113_RS15980 PF03846 Cell division inhibitor SulA F3113_RS15985 PF01389 OmpA-like transmembrane domain F3113_RS15985 PF00691 OmpA family F3113_RS15990 PF17414 MatP C-terminal ribbon-helix-helix domain F3113_RS15990 PF06303 MatP N-terminal domain F3113_RS15995 PF05362 Lon protease (S16) C-terminal proteolytic domain F3113_RS15995 PF13654 AAA domain F3113_RS16000 PF07977 FabA-like domain F3113_RS16005 PF04957 Ribosome modulation factor F3113_RS16010 PF03886 ABC-type transport auxiliary lipoprotein component F3113_RS16015 PF02470 MlaD protein F3113_RS16020 PF04403 Paraquat-inducible protein A F3113_RS16025 PF00005 ABC transporter F3113_RS16025 PF12848 ABC transporter F3113_RS16025 PF16326 ABC transporter C-terminal domain F3113_RS16030 PF01170 Putative RNA methylase family UPF0020 F3113_RS16030 PF02926 THUMP domain F3113_RS16030 PF10672 S-adenosylmethionine-dependent methyltransferase F3113_RS16035 PF00111 2Fe-2S iron-sulfur cluster binding domain F3113_RS16035 PF03476 MOSC N-terminal beta barrel domain F3113_RS16035 PF03473 MOSC domain F3113_RS16040 PF07126 Cell-division protein ZapC F3113_RS16045 PF01180 Dihydroorotate dehydrogenase F3113_RS16050 PF03358 NADPH-dependent FMN reductase F3113_RS16055 PF09084 NMT1/THI5 like F3113_RS16060 PF00296 Luciferase-like monooxygenase F3113_RS16065 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS16070 PF00005 ABC transporter F3113_RS16075 PF11940 Domain of unknown function (DUF3458) Ig-like fold F3113_RS16075 PF17432 Domain of unknown function (DUF3458_C) ARM repeats F3113_RS16075 PF01433 Peptidase family M1 domain F3113_RS16080 PF06183 DinI-like family F3113_RS16205 PF04860 Phage portal protein F3113_RS16215 PF03354 Phage Terminase F3113_RS16245 PF00905 Penicillin binding protein transpeptidase domain F3113_RS16260 PF00182 Chitinase class I F3113_RS16380 PF12167 Arm DNA-binding domain F3113_RS16380 PF00589 Phage integrase family F3113_RS16385 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain F3113_RS16385 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family F3113_RS16390 PF00152 tRNA synthetases class II (D, K and N) F3113_RS16390 PF01336 OB-fold nucleic acid binding domain F3113_RS16395 PF00267 Gram-negative porin F3113_RS16400 PF00155 Aminotransferase class I and II F3113_RS16405 PF00753 Metallo-beta-lactamase superfamily F3113_RS16410 PF05951 Bacterial protein of unknown function (DUF882) F3113_RS16415 PF03734 L,D-transpeptidase catalytic domain F3113_RS16415 PF01471 Putative peptidoglycan binding domain F3113_RS16420 PF16330 MukB hinge domain F3113_RS16420 PF04310 MukB N-terminal F3113_RS16425 PF04288 MukE-like family F3113_RS16430 PF17192 MukF middle domain F3113_RS16430 PF17193 MukF C-terminal domain F3113_RS16430 PF03882 MukF winged-helix domain F3113_RS16435 PF13847 Methyltransferase domain F3113_RS16440 PF02698 DUF218 domain F3113_RS16445 PF01636 Phosphotransferase enzyme family F3113_RS16450 PF02348 Cytidylyltransferase F3113_RS16455 PF03966 Trm112p-like protein F3113_RS16460 PF06224 Winged helix DNA-binding domain F3113_RS16465 PF02606 Tetraacyldisaccharide-1-P 4'-kinase F3113_RS16470 PF00005 ABC transporter F3113_RS16470 PF00664 ABC transporter transmembrane region F3113_RS16475 PF00753 Metallo-beta-lactamase superfamily F3113_RS16475 PF03772 Competence protein F3113_RS16480 PF00216 Bacterial DNA-binding protein F3113_RS16485 PF00575 S1 RNA binding domain F3113_RS16490 PF02224 Cytidylate kinase F3113_RS16495 PF01435 Peptidase family M48 F3113_RS16500 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) F3113_RS16505 PF00266 Aminotransferase class-V F3113_RS16510 PF04239 Protein of unknown function (DUF421) F3113_RS16515 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding F3113_RS16515 PF18381 YcaO cyclodehydratase C-terminal domain F3113_RS16520 PF01226 Formate/nitrite transporter F3113_RS16525 PF01228 Glycine radical F3113_RS16525 PF02901 Pyruvate formate lyase-like F3113_RS16530 PF04606 Ogr/Delta-like zinc finger F3113_RS16675 PF05840 Bacteriophage replication gene A protein (GPA) F3113_RS16715 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS16715 PF00589 Phage integrase family F3113_RS16720 PF04055 Radical SAM superfamily F3113_RS16725 PF13520 Amino acid permease F3113_RS16730 PF07690 Major Facilitator Superfamily F3113_RS16735 PF00857 Isochorismatase family F3113_RS16740 PF04976 DMSO reductase anchor subunit (DmsC) F3113_RS16745 PF13247 4Fe-4S dicluster domain F3113_RS16745 PF12800 4Fe-4S binding domain F3113_RS16750 PF04879 Molybdopterin oxidoreductase Fe4S4 domain F3113_RS16750 PF00384 Molybdopterin oxidoreductase F3113_RS16750 PF01568 Molydopterin dinucleotide binding domain F3113_RS16755 PF02403 Seryl-tRNA synthetase N-terminal domain F3113_RS16755 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3113_RS16760 PF12002 MgsA AAA+ ATPase C terminal F3113_RS16760 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS16760 PF16193 AAA C-terminal domain F3113_RS16765 PF03548 Outer membrane lipoprotein carrier protein LolA F3113_RS16770 PF01580 FtsK/SpoIIIE family F3113_RS16770 PF13491 4TM region of DNA translocase FtsK/SpoIIIE F3113_RS16770 PF09397 Ftsk gamma domain F3113_RS16770 PF17854 FtsK alpha domain F3113_RS16775 PF01037 Lrp/AsnC ligand binding domain F3113_RS16780 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS16785 PF00664 ABC transporter transmembrane region F3113_RS16785 PF00005 ABC transporter F3113_RS16790 PF00664 ABC transporter transmembrane region F3113_RS16790 PF00005 ABC transporter F3113_RS16795 PF03588 Leucyl/phenylalanyl-tRNA protein transferase F3113_RS16805 PF01176 Translation initiation factor 1A / IF-1 F3113_RS16810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS16810 PF03466 LysR substrate binding domain F3113_RS16815 PF02678 Pirin F3113_RS16815 PF05726 Pirin C-terminal cupin domain F3113_RS16820 PF00857 Isochorismatase family F3113_RS16830 PF05958 tRNA (Uracil-5-)-methyltransferase F3113_RS16835 PF10767 Protein of unknown function (DUF2593) F3113_RS16840 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS16845 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS16850 PF00005 ABC transporter F3113_RS16850 PF08402 TOBE domain F3113_RS16855 PF13416 Bacterial extracellular solute-binding protein F3113_RS16860 PF10722 Putative bacterial sensory transduction regulator F3113_RS16865 PF08443 RimK-like ATP-grasp domain F3113_RS16865 PF18030 RimK PreATP-grasp domain F3113_RS16870 PF00881 Nitroreductase family F3113_RS16875 PF07214 Protein of unknown function (DUF1418) F3113_RS16880 PF00462 Glutaredoxin F3113_RS16885 PF11045 Putative inner membrane protein of Enterobacteriaceae F3113_RS16890 PF02080 TrkA-C domain F3113_RS16890 PF06826 Predicted Permease Membrane Region F3113_RS16910 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS16910 PF03466 LysR substrate binding domain F3113_RS16915 PF00440 Bacterial regulatory proteins, tetR family F3113_RS16920 PF07690 Major Facilitator Superfamily F3113_RS16935 PF07690 Major Facilitator Superfamily F3113_RS16940 PF01569 PAP2 superfamily F3113_RS16945 PF08220 DeoR-like helix-turn-helix domain F3113_RS16945 PF00455 DeoR C terminal sensor domain F3113_RS16950 PF00768 D-alanyl-D-alanine carboxypeptidase F3113_RS16950 PF07943 Penicillin-binding protein 5, C-terminal domain F3113_RS16955 PF13417 Glutathione S-transferase, N-terminal domain F3113_RS16955 PF00043 Glutathione S-transferase, C-terminal domain F3113_RS16960 PF07995 Glucose / Sorbosone dehydrogenase F3113_RS16965 PF10799 Biofilm formation protein (YliH/bssR) F3113_RS17025 PF04055 Radical SAM superfamily F3113_RS17025 PF00919 Uncharacterized protein family UPF0004 F3113_RS17025 PF18693 TRAM domain F3113_RS17030 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS17030 PF12911 N-terminal TM domain of oligopeptide transport permease C F3113_RS17035 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS17040 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS17045 PF00005 ABC transporter F3113_RS17045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region F3113_RS17050 PF01112 Asparaginase F3113_RS17055 PF01909 Nucleotidyltransferase domain F3113_RS17055 PF13427 Domain of unknown function (DUF4111) F3113_RS17060 PF00994 Probable molybdopterin binding domain F3113_RS17060 PF03454 MoeA C-terminal region (domain IV) F3113_RS17060 PF03453 MoeA N-terminal region (domain I and II) F3113_RS17065 PF00899 ThiF family F3113_RS17070 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3113_RS17075 PF04055 Radical SAM superfamily F3113_RS17080 PF01228 Glycine radical F3113_RS17080 PF02901 Pyruvate formate lyase-like F3113_RS17090 PF07350 Protein of unknown function (DUF1479) F3113_RS17095 PF00005 ABC transporter F3113_RS17095 PF12848 ABC transporter F3113_RS17100 PF17969 L,D-transpeptidase C-terminal domain F3113_RS17100 PF03734 L,D-transpeptidase catalytic domain F3113_RS17105 PF03600 Citrate transporter F3113_RS17110 PF02742 Iron dependent repressor, metal binding and dimerisation domain F3113_RS17110 PF01325 Iron dependent repressor, N-terminal DNA binding domain F3113_RS17120 PF00884 Sulfatase F3113_RS17125 PF13505 Outer membrane protein beta-barrel domain F3113_RS17130 PF00892 EamA-like transporter family F3113_RS17135 PF00210 Ferritin-like domain F3113_RS17140 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS17145 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS17150 PF00005 ABC transporter F3113_RS17155 PF00924 Mechanosensitive ion channel F3113_RS17160 PF05971 RNA methyltransferase F3113_RS17165 PF07338 Protein of unknown function (DUF1471) F3113_RS17170 PF07715 TonB-dependent Receptor Plug Domain F3113_RS17170 PF00593 TonB dependent receptor F3113_RS17180 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3113_RS17185 PF07338 Protein of unknown function (DUF1471) F3113_RS17190 PF02615 Malate/L-lactate dehydrogenase F3113_RS17195 PF02885 Glycosyl transferase family, helical bundle domain F3113_RS17200 PF13307 Helicase C-terminal domain F3113_RS17200 PF06733 DEAD_2 F3113_RS17205 PF00939 Sodium:sulfate symporter transmembrane region F3113_RS17210 PF10397 Adenylosuccinate lyase C-terminus F3113_RS17210 PF00206 Lyase F3113_RS17215 PF00392 Bacterial regulatory proteins, gntR family F3113_RS17215 PF07702 UTRA domain F3113_RS17220 PF00271 Helicase conserved C-terminal domain F3113_RS17220 PF00270 DEAD/DEAH box helicase F3113_RS17225 PF09209 Tetracyclin repressor-like, C-terminal domain F3113_RS17225 PF00440 Bacterial regulatory proteins, tetR family F3113_RS17230 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS17235 PF00005 ABC transporter F3113_RS17250 PF11076 Putative inner membrane protein YbhQ F3113_RS17255 PF03372 Endonuclease/Exonuclease/phosphatase family F3113_RS17260 PF13091 PLD-like domain F3113_RS17265 PF03706 Lysylphosphatidylglycerol synthase TM region F3113_RS17270 PF01027 Inhibitor of apoptosis-promoting Bax1 F3113_RS17275 PF02391 MoaE protein F3113_RS17280 PF02597 ThiS family F3113_RS17285 PF01967 MoaC family F3113_RS17290 PF00994 Probable molybdopterin binding domain F3113_RS17295 PF04055 Radical SAM superfamily F3113_RS17295 PF06463 Molybdenum Cofactor Synthesis C F3113_RS17300 PF01933 Uncharacterised protein family UPF0052 F3113_RS17305 PF17757 UvrB interaction domain F3113_RS17305 PF02151 UvrB/uvrC motif F3113_RS17305 PF00271 Helicase conserved C-terminal domain F3113_RS17305 PF04851 Type III restriction enzyme, res subunit F3113_RS17305 PF12344 Ultra-violet resistance protein B F3113_RS17310 PF00005 ABC transporter F3113_RS17320 PF08241 Methyltransferase domain F3113_RS17325 PF00155 Aminotransferase class I and II F3113_RS17330 PF04055 Radical SAM superfamily F3113_RS17330 PF06968 Biotin and Thiamin Synthesis associated domain F3113_RS17335 PF00202 Aminotransferase class-III F3113_RS17340 PF01161 Phosphatidylethanolamine-binding protein F3113_RS17345 PF00221 Aromatic amino acid lyase F3113_RS17350 PF17392 Urocanase C-terminal domain F3113_RS17350 PF17391 Urocanase N-terminal domain F3113_RS17350 PF01175 Urocanase Rossmann-like domain F3113_RS17355 PF00392 Bacterial regulatory proteins, gntR family F3113_RS17355 PF07702 UTRA domain F3113_RS17360 PF00491 Arginase family F3113_RS17365 PF01979 Amidohydrolase family F3113_RS17370 PF01095 Pectinesterase F3113_RS17380 PF10282 Lactonase, 7-bladed beta-propeller F3113_RS17390 PF03459 TOBE domain F3113_RS17390 PF00005 ABC transporter F3113_RS17395 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS17405 PF10766 Multidrug efflux pump-associated protein AcrZ F3113_RS17410 PF03459 TOBE domain F3113_RS17410 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS17415 PF00005 ABC transporter F3113_RS17420 PF16363 GDP-mannose 4,6 dehydratase F3113_RS17425 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain F3113_RS17425 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain F3113_RS17430 PF10509 Galactokinase galactose-binding signature F3113_RS17430 PF08544 GHMP kinases C terminal F3113_RS17430 PF00288 GHMP kinases N terminal domain F3113_RS17435 PF01263 Aldose 1-epimerase F3113_RS17440 PF00300 Histidine phosphatase superfamily (branch 1) F3113_RS17445 PF00793 DAHP synthetase I family F3113_RS17450 PF13985 YbgS-like protein F3113_RS17455 PF01545 Cation efflux family F3113_RS17460 PF04973 Nicotinamide mononucleotide transporter F3113_RS17465 PF02445 Quinolinate synthetase A protein F3113_RS17490 PF13174 Tetratricopeptide repeat F3113_RS17490 PF16331 TolA binding protein trimerisation F3113_RS17495 PF00691 OmpA family F3113_RS17500 PF04052 TolB amino-terminal domain F3113_RS17500 PF07676 WD40-like Beta Propeller Repeat F3113_RS17505 PF06519 TolA C-terminal F3113_RS17510 PF02472 Biopolymer transport protein ExbD/TolR F3113_RS17515 PF01618 MotA/TolQ/ExbB proton channel family F3113_RS17520 PF03061 Thioesterase superfamily F3113_RS17525 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) F3113_RS17530 PF08173 Membrane bound YbgT-like protein F3113_RS17535 PF02322 Cytochrome bd terminal oxidase subunit II F3113_RS17540 PF01654 Cytochrome bd terminal oxidase subunit I F3113_RS17545 PF02310 B12 binding domain F3113_RS17550 PF13941 MutL protein F3113_RS17555 PF06368 Methylaspartate mutase E chain (MutE) F3113_RS17560 PF05034 Methylaspartate ammonia-lyase N-terminus F3113_RS17560 PF07476 Methylaspartate ammonia-lyase C-terminus F3113_RS17575 PF00375 Sodium:dicarboxylate symporter family F3113_RS17580 PF04960 Glutaminase F3113_RS17585 PF05683 Fumarase C-terminus F3113_RS17585 PF05681 Fumarate hydratase (Fumerase) F3113_RS17590 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP F3113_RS17595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS17595 PF03466 LysR substrate binding domain F3113_RS17600 PF10414 Sirohaem synthase dimerisation region F3113_RS17600 PF14824 Sirohaem biosynthesis protein central F3113_RS17600 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases F3113_RS17610 PF02629 CoA binding domain F3113_RS17610 PF00549 CoA-ligase F3113_RS17615 PF00549 CoA-ligase F3113_RS17615 PF08442 ATP-grasp domain F3113_RS17620 PF02817 e3 binding domain F3113_RS17620 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3113_RS17620 PF00364 Biotin-requiring enzyme F3113_RS17625 PF02779 Transketolase, pyrimidine binding domain F3113_RS17625 PF16870 2-oxoglutarate dehydrogenase C-terminal F3113_RS17625 PF00676 Dehydrogenase E1 component F3113_RS17625 PF16078 2-oxoglutarate dehydrogenase N-terminus F3113_RS17630 PF13085 2Fe-2S iron-sulfur cluster binding domain F3113_RS17635 PF02910 Fumarate reductase flavoprotein C-term F3113_RS17635 PF00890 FAD binding domain F3113_RS17640 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F3113_RS17645 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit F3113_RS17650 PF00285 Citrate synthase, C-terminal domain F3113_RS17670 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) F3113_RS17675 PF05145 Transition state regulatory protein AbrB F3113_RS17680 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain F3113_RS17680 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain F3113_RS17680 PF06827 Zinc finger found in FPG and IleRS F3113_RS17685 PF01470 Pyroglutamyl peptidase F3113_RS17700 PF03746 LamB/YcsF family F3113_RS17705 PF02626 Carboxyltransferase domain, subdomain A and B F3113_RS17710 PF02682 Carboxyltransferase domain, subdomain C and D F3113_RS17715 PF01784 NIF3 (NGG1p interacting factor 3) F3113_RS17720 PF00854 POT family F3113_RS17725 PF04754 Putative transposase, YhgA-like F3113_RS17730 PF00875 DNA photolyase F3113_RS17730 PF03441 FAD binding domain of DNA photolyase F3113_RS17735 PF08349 Protein of unknown function (DUF1722) F3113_RS17740 PF10725 Protein of unknown function (DUF2517) F3113_RS17745 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) F3113_RS17750 PF03814 Potassium-transporting ATPase A subunit F3113_RS17760 PF02669 K+-transporting ATPase, c chain F3113_RS17765 PF13492 GAF domain F3113_RS17765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS17765 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS17765 PF02702 Osmosensitive K+ channel His kinase sensor domain F3113_RS17765 PF13493 Domain of unknown function (DUF4118) F3113_RS17770 PF00072 Response regulator receiver domain F3113_RS17770 PF00486 Transcriptional regulatory protein, C terminal F3113_RS17775 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I F3113_RS17775 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II F3113_RS17775 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III F3113_RS17775 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain F3113_RS17780 PF17206 SeqA protein N-terminal domain F3113_RS17780 PF03925 SeqA protein C-terminal domain F3113_RS17785 PF12697 Alpha/beta hydrolase family F3113_RS17790 PF01402 Ribbon-helix-helix protein, copG family F3113_RS17795 PF00258 Flavodoxin F3113_RS17805 PF01475 Ferric uptake regulator family F3113_RS17810 PF03466 LysR substrate binding domain F3113_RS17810 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS17815 PF00890 FAD binding domain F3113_RS17815 PF14537 Cytochrome c3 F3113_RS17825 PF07690 Major Facilitator Superfamily F3113_RS17830 PF13982 YbfN-like lipoprotein F3113_RS17835 PF03573 outer membrane porin, OprD family F3113_RS17840 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3113_RS17840 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain F3113_RS17845 PF00367 phosphotransferase system, EIIB F3113_RS17845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 F3113_RS17845 PF02378 Phosphotransferase system, EIIC F3113_RS17850 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase F3113_RS17855 PF01979 Amidohydrolase family F3113_RS17860 PF00480 ROK family F3113_RS17860 PF01047 MarR family F3113_RS17865 PF13344 Haloacid dehalogenase-like hydrolase F3113_RS17870 PF00733 Asparagine synthase F3113_RS17870 PF13537 Glutamine amidotransferase domain F3113_RS17890 PF01494 FAD binding domain F3113_RS17895 PF00919 Uncharacterized protein family UPF0004 F3113_RS17895 PF04055 Radical SAM superfamily F3113_RS17895 PF01938 TRAM domain F3113_RS17900 PF02562 PhoH-like protein F3113_RS17905 PF02130 Uncharacterized protein family UPF0054 F3113_RS17910 PF03471 Transporter associated domain F3113_RS17910 PF00571 CBS domain F3113_RS17915 PF00795 Carbon-nitrogen hydrolase F3113_RS17920 PF00497 Bacterial extracellular solute-binding proteins, family 3 F3113_RS17925 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS17930 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS17935 PF00005 ABC transporter F3113_RS17940 PF01156 Inosine-uridine preferring nucleoside hydrolase F3113_RS17945 PF07295 Zinc-ribbon containing domain F3113_RS17950 PF08264 Anticodon-binding domain of tRNA F3113_RS17950 PF13603 Leucyl-tRNA synthetase, Domain 2 F3113_RS17950 PF00133 tRNA synthetases class I (I, L, M and V) F3113_RS17955 PF04390 Lipopolysaccharide-assembly F3113_RS17960 PF06144 DNA polymerase III, delta subunit F3113_RS17960 PF14840 Processivity clamp loader gamma complex DNA pol III C-term F3113_RS17965 PF01467 Cytidylyltransferase-like F3113_RS17970 PF00155 Aminotransferase class I and II F3113_RS17975 PF00300 Histidine phosphatase superfamily (branch 1) F3113_RS17985 PF02590 Predicted SPOUT methyltransferase F3113_RS17990 PF00905 Penicillin binding protein transpeptidase domain F3113_RS17990 PF03717 Penicillin-binding Protein dimerisation domain F3113_RS17995 PF01098 Cell cycle protein F3113_RS18000 PF03330 Lytic transglycolase F3113_RS18000 PF05036 Sporulation related domain F3113_RS18005 PF07943 Penicillin-binding protein 5, C-terminal domain F3113_RS18005 PF00768 D-alanyl-D-alanine carboxypeptidase F3113_RS18010 PF04359 Protein of unknown function (DUF493) F3113_RS18015 PF03099 Biotin/lipoate A/B protein ligase family F3113_RS18020 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family F3113_RS18020 PF04055 Radical SAM superfamily F3113_RS18025 PF02416 mttA/Hcf106 family F3113_RS18030 PF00795 Carbon-nitrogen hydrolase F3113_RS18035 PF02537 CrcB-like protein, Camphor Resistance (CrcB) F3113_RS18040 PF00313 'Cold-shock' DNA-binding domain F3113_RS18045 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP F3113_RS18050 PF03606 C4-dicarboxylate anaerobic carrier F3113_RS18065 PF08218 Citrate lyase ligase C-terminal domain F3113_RS18070 PF06857 Malonate decarboxylase delta subunit (MdcD) F3113_RS18075 PF03328 HpcH/HpaI aldolase/citrate lyase family F3113_RS18080 PF04223 Citrate lyase, alpha subunit (CitF) F3113_RS18085 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase F3113_RS18090 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase F3113_RS18095 PF00939 Sodium:sulfate symporter transmembrane region F3113_RS18100 PF00445 Ribonuclease T2 family F3113_RS18110 PF00561 alpha/beta hydrolase fold F3113_RS18115 PF14760 Rnk N-terminus F3113_RS18115 PF01272 Transcription elongation factor, GreA/GreB, C-term F3113_RS18120 PF00582 Universal stress protein family F3113_RS18130 PF13247 4Fe-4S dicluster domain F3113_RS18145 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS18145 PF13192 Thioredoxin domain F3113_RS18150 PF10417 C-terminal domain of 1-Cys peroxiredoxin F3113_RS18150 PF00578 AhpC/TSA family F3113_RS18155 PF13098 Thioredoxin-like domain F3113_RS18160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS18160 PF03466 LysR substrate binding domain F3113_RS18165 PF11922 Domain of unknown function (DUF3440) F3113_RS18165 PF01507 Phosphoadenosine phosphosulfate reductase family F3113_RS18170 PF02195 ParB-like nuclease domain F3113_RS18175 PF00155 Aminotransferase class I and II F3113_RS18180 PF00465 Iron-containing alcohol dehydrogenase F3113_RS18185 PF04328 Selenoprotein, putative F3113_RS18190 PF02554 Carbon starvation protein CstA F3113_RS18190 PF13722 5TM C-terminal transporter carbon starvation CstA F3113_RS18195 PF03061 Thioesterase superfamily F3113_RS18205 PF00857 Isochorismatase family F3113_RS18205 PF00550 Phosphopantetheine attachment site F3113_RS18210 PF00501 AMP-binding enzyme F3113_RS18210 PF13193 AMP-binding enzyme C-terminal domain F3113_RS18215 PF00425 chorismate binding enzyme F3113_RS18220 PF01497 Periplasmic binding protein F3113_RS18225 PF05977 Transmembrane secretion effector F3113_RS18230 PF01032 FecCD transport family F3113_RS18235 PF01032 FecCD transport family F3113_RS18240 PF00005 ABC transporter F3113_RS18245 PF02706 Chain length determinant protein F3113_RS18250 PF00501 AMP-binding enzyme F3113_RS18250 PF13193 AMP-binding enzyme C-terminal domain F3113_RS18250 PF00668 Condensation domain F3113_RS18250 PF00975 Thioesterase domain F3113_RS18250 PF00550 Phosphopantetheine attachment site F3113_RS18255 PF03621 MbtH-like protein F3113_RS18260 PF11806 Domain of unknown function (DUF3327) F3113_RS18260 PF00756 Putative esterase F3113_RS18265 PF07715 TonB-dependent Receptor Plug Domain F3113_RS18265 PF00593 TonB dependent receptor F3113_RS18270 PF01648 4'-phosphopantetheinyl transferase superfamily F3113_RS18270 PF17837 4'-phosphopantetheinyl transferase N-terminal domain F3113_RS18280 PF04107 Glutamate-cysteine ligase family 2(GCS2) F3113_RS18285 PF06643 Protein of unknown function (DUF1158) F3113_RS18290 PF12833 Helix-turn-helix domain F3113_RS18295 PF12706 Beta-lactamase superfamily domain F3113_RS18300 PF00440 Bacterial regulatory proteins, tetR family F3113_RS18300 PF16295 Tetracyclin repressor-like, C-terminal domain F3113_RS18305 PF04237 YjbR F3113_RS18310 PF00881 Nitroreductase family F3113_RS18315 PF00924 Mechanosensitive ion channel F3113_RS18320 PF00356 Bacterial regulatory proteins, lacI family F3113_RS18335 PF03825 Nucleoside H+ symporter F3113_RS18340 PF00324 Amino acid permease F3113_RS18355 PF12951 Passenger-associated-transport-repeat F3113_RS18360 PF13188 PAS domain F3113_RS18360 PF03707 Bacterial signalling protein N terminal repeat F3113_RS18360 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS18360 PF00563 EAL domain F3113_RS18375 PF04224 Protein of unknown function, DUF417 F3113_RS18380 PF07338 Protein of unknown function (DUF1471) F3113_RS18385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3113_RS18385 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS18390 PF12833 Helix-turn-helix domain F3113_RS18390 PF12852 Cupin F3113_RS18395 PF00873 AcrB/AcrD/AcrF family F3113_RS18400 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS18400 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS18405 PF13737 Transposase DDE domain F3113_RS18410 PF11604 Copper binding periplasmic protein CusF F3113_RS18415 PF02321 Outer membrane efflux protein F3113_RS18420 PF00486 Transcriptional regulatory protein, C terminal F3113_RS18420 PF00072 Response regulator receiver domain F3113_RS18425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS18425 PF00672 HAMP domain F3113_RS18425 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS18440 PF03099 Biotin/lipoate A/B protein ligase family F3113_RS18440 PF12706 Beta-lactamase superfamily domain F3113_RS18445 PF18364 Molybdopterin oxidoreductase N-terminal domain F3113_RS18445 PF01568 Molydopterin dinucleotide binding domain F3113_RS18445 PF00384 Molybdopterin oxidoreductase F3113_RS18455 PF00582 Universal stress protein family F3113_RS18460 PF02613 Nitrate reductase delta subunit F3113_RS18465 PF00384 Molybdopterin oxidoreductase F3113_RS18465 PF18364 Molybdopterin oxidoreductase N-terminal domain F3113_RS18465 PF01568 Molydopterin dinucleotide binding domain F3113_RS18470 PF03264 NapC/NirT cytochrome c family, N-terminal region F3113_RS18475 PF00072 Response regulator receiver domain F3113_RS18475 PF00486 Transcriptional regulatory protein, C terminal F3113_RS18480 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS18485 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS18485 PF00672 HAMP domain F3113_RS18485 PF00072 Response regulator receiver domain F3113_RS18485 PF01627 Hpt domain F3113_RS18485 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS18500 PF00196 Bacterial regulatory proteins, luxR family F3113_RS18515 PF00072 Response regulator receiver domain F3113_RS18515 PF00196 Bacterial regulatory proteins, luxR family F3113_RS18520 PF00419 Fimbrial protein F3113_RS18525 PF00419 Fimbrial protein F3113_RS18530 PF13953 PapC C-terminal domain F3113_RS18530 PF13954 PapC N-terminal domain F3113_RS18530 PF00577 Outer membrane usher protein F3113_RS18535 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS18535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS18545 PF00419 Fimbrial protein F3113_RS18550 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain F3113_RS18550 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain F3113_RS18560 PF04307 LexA-binding, inner membrane-associated putative hydrolase F3113_RS18565 PF01406 tRNA synthetases class I (C) catalytic domain F3113_RS18565 PF09190 DALR domain F3113_RS18570 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD F3113_RS18575 PF00149 Calcineurin-like phosphoesterase F3113_RS18580 PF00731 AIR carboxylase F3113_RS18585 PF02222 ATP-grasp domain F3113_RS18585 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain F3113_RS18590 PF00696 Amino acid kinase family F3113_RS18595 PF11392 Protein of unknown function (DUF2877) F3113_RS18600 PF06545 Protein of unknown function (DUF1116) F3113_RS18605 PF00549 CoA-ligase F3113_RS18605 PF02629 CoA binding domain F3113_RS18610 PF02615 Malate/L-lactate dehydrogenase F3113_RS18615 PF01546 Peptidase family M20/M25/M40 F3113_RS18620 PF07883 Cupin domain F3113_RS18620 PF05899 Protein of unknown function (DUF861) F3113_RS18625 PF02595 Glycerate kinase family F3113_RS18630 PF00860 Permease family F3113_RS18635 PF01979 Amidohydrolase family F3113_RS18650 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3113_RS18650 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3113_RS18655 PF01261 Xylose isomerase-like TIM barrel F3113_RS18660 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS18660 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS18660 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS18665 PF09339 IclR helix-turn-helix domain F3113_RS18665 PF01614 Bacterial transcriptional regulator F3113_RS18670 PF04115 Ureidoglycolate lyase F3113_RS18675 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS18675 PF03466 LysR substrate binding domain F3113_RS18685 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS18690 PF09383 NIL domain F3113_RS18690 PF00005 ABC transporter F3113_RS18695 PF03180 NLPA lipoprotein F3113_RS18700 PF00267 Gram-negative porin F3113_RS18710 PF00005 ABC transporter F3113_RS18715 PF13472 GDSL-like Lipase/Acylhydrolase family F3113_RS18720 PF00106 short chain dehydrogenase F3113_RS18725 PF00085 Thioredoxin F3113_RS18730 PF03649 Uncharacterised protein family (UPF0014) F3113_RS18735 PF00005 ABC transporter F3113_RS18740 PF01145 SPFH domain / Band 7 family F3113_RS18740 PF16200 C-terminal region of band_7 F3113_RS18745 PF01957 NfeD-like C-terminal, partner-binding F3113_RS18760 PF13411 MerR HTH family regulatory protein F3113_RS18765 PF07715 TonB-dependent Receptor Plug Domain F3113_RS18770 PF01497 Periplasmic binding protein F3113_RS18775 PF04055 Radical SAM superfamily F3113_RS18780 PF06228 Haem utilisation ChuX/HutX F3113_RS18790 PF01032 FecCD transport family F3113_RS18795 PF00005 ABC transporter F3113_RS18800 PF00403 Heavy-metal-associated domain F3113_RS18805 PF01963 TraB family F3113_RS18810 PF04073 Aminoacyl-tRNA editing domain F3113_RS18815 PF00149 Calcineurin-like phosphoesterase F3113_RS18815 PF02872 5'-nucleotidase, C-terminal domain F3113_RS18820 PF07690 Major Facilitator Superfamily F3113_RS18825 PF00999 Sodium/hydrogen exchanger family F3113_RS18825 PF02254 TrkA-N domain F3113_RS18830 PF00294 pfkB family carbohydrate kinase F3113_RS18835 PF07859 alpha/beta hydrolase fold F3113_RS18840 PF00762 Ferrochelatase F3113_RS18845 PF05191 Adenylate kinase, active site lid F3113_RS18850 PF00183 Hsp90 protein F3113_RS18850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS18855 PF13662 Toprim domain F3113_RS18855 PF02132 RecR protein F3113_RS18860 PF02575 YbaB/EbfC DNA-binding family F3113_RS18865 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding F3113_RS18865 PF12170 DNA polymerase III tau subunit V interacting with alpha F3113_RS18865 PF12169 DNA polymerase III subunits gamma and tau domain III F3113_RS18870 PF00156 Phosphoribosyl transferase domain F3113_RS18875 PF04304 Protein of unknown function (DUF454) F3113_RS18880 PF07445 Primosomal replication protein priC F3113_RS18885 PF10689 Protein of unknown function (DUF2496) F3113_RS18890 PF00924 Mechanosensitive ion channel F3113_RS18890 PF12795 Mechanosensitive ion channel porin domain F3113_RS18890 PF12794 Mechanosensitive ion channel inner membrane domain 1 F3113_RS18895 PF00440 Bacterial regulatory proteins, tetR family F3113_RS18895 PF08361 MAATS-type transcriptional repressor, C-terminal region F3113_RS18900 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS18900 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS18905 PF00873 AcrB/AcrD/AcrF family F3113_RS18910 PF10757 Biofilm formation regulator YbaJ F3113_RS18915 PF05321 Haemolysin expression modulating protein F3113_RS18920 PF12464 Maltose acetyltransferase F3113_RS18920 PF14602 Hexapeptide repeat of succinyl-transferase F3113_RS18925 PF10777 Inner membrane protein YlaC F3113_RS18930 PF00444 Ribosomal protein L36 F3113_RS18935 PF01197 Ribosomal protein L31 F3113_RS18940 PF12792 CSS motif domain associated with EAL F3113_RS18940 PF00563 EAL domain F3113_RS18945 PF07237 Protein of unknown function (DUF1428) F3113_RS18955 PF00392 Bacterial regulatory proteins, gntR family F3113_RS18955 PF00155 Aminotransferase class I and II F3113_RS18975 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain F3113_RS18980 PF09619 Type III secretion system lipoprotein chaperone (YscW) F3113_RS18990 PF00909 Ammonium Transporter Family F3113_RS18995 PF00543 Nitrogen regulatory protein P-II F3113_RS19000 PF00664 ABC transporter transmembrane region F3113_RS19000 PF00005 ABC transporter F3113_RS19005 PF00005 ABC transporter F3113_RS19005 PF00664 ABC transporter transmembrane region F3113_RS19010 PF01037 Lrp/AsnC ligand binding domain F3113_RS19010 PF13404 AsnC-type helix-turn-helix domain F3113_RS19015 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS19025 PF12793 Sugar transport-related sRNA regulator N-term F3113_RS19025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS19030 PF06508 Queuosine biosynthesis protein QueC F3113_RS19045 PF13145 PPIC-type PPIASE domain F3113_RS19050 PF00216 Bacterial DNA-binding protein F3113_RS19055 PF02190 ATP-dependent protease La (LON) substrate-binding domain F3113_RS19055 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS19055 PF05362 Lon protease (S16) C-terminal proteolytic domain F3113_RS19060 PF06689 ClpX C4-type zinc finger F3113_RS19060 PF10431 C-terminal, D2-small domain, of ClpB protein F3113_RS19060 PF07724 AAA domain (Cdc48 subfamily) F3113_RS19065 PF00574 Clp protease F3113_RS19070 PF05697 Bacterial trigger factor protein (TF) F3113_RS19070 PF05698 Bacterial trigger factor protein (TF) C-terminus F3113_RS19070 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3113_RS19075 PF01722 BolA-like protein F3113_RS19080 PF03923 Uncharacterized lipoprotein F3113_RS19080 PF08139 Prokaryotic membrane lipoprotein lipid attachment site F3113_RS19085 PF07690 Major Facilitator Superfamily F3113_RS19090 PF06481 COX Aromatic Rich Motif F3113_RS19090 PF00116 Cytochrome C oxidase subunit II, periplasmic domain F3113_RS19095 PF00115 Cytochrome C and Quinol oxidase polypeptide I F3113_RS19100 PF00510 Cytochrome c oxidase subunit III F3113_RS19105 PF03626 Prokaryotic Cytochrome C oxidase subunit IV F3113_RS19110 PF01040 UbiA prenyltransferase family F3113_RS19115 PF07690 Major Facilitator Superfamily F3113_RS19120 PF04461 Protein of unknown function (DUF520) F3113_RS19125 PF02558 Ketopantoate reductase PanE/ApbA F3113_RS19125 PF08546 Ketopantoate reductase PanE/ApbA C terminal F3113_RS19130 PF01965 DJ-1/PfpI family F3113_RS19140 PF02568 Thiamine biosynthesis protein (ThiI) F3113_RS19140 PF02926 THUMP domain F3113_RS19145 PF02609 Exonuclease VII small subunit F3113_RS19150 PF00348 Polyprenyl synthetase F3113_RS19155 PF13292 1-deoxy-D-xylulose-5-phosphate synthase F3113_RS19155 PF02779 Transketolase, pyrimidine binding domain F3113_RS19155 PF02780 Transketolase, C-terminal domain F3113_RS19160 PF00248 Aldo/keto reductase family F3113_RS19165 PF04608 Phosphatidylglycerophosphatase A F3113_RS19170 PF00586 AIR synthase related protein, N-terminal domain F3113_RS19170 PF02769 AIR synthase related protein, C-terminal domain F3113_RS19175 PF01029 NusB family F3113_RS19180 PF00885 6,7-dimethyl-8-ribityllumazine synthase F3113_RS19185 PF01872 RibD C-terminal domain F3113_RS19185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region F3113_RS19190 PF03477 ATP cone domain F3113_RS19195 PF11622 Protein of unknown function (DUF3251) F3113_RS19200 PF03502 Nucleoside-specific channel-forming protein, Tsx F3113_RS19215 PF07549 SecD/SecF GG Motif F3113_RS19215 PF02355 Protein export membrane protein F3113_RS19220 PF02355 Protein export membrane protein F3113_RS19220 PF13721 SecD export protein N-terminal TM region F3113_RS19220 PF07549 SecD/SecF GG Motif F3113_RS19225 PF02699 Preprotein translocase subunit F3113_RS19230 PF01702 Queuine tRNA-ribosyltransferase F3113_RS19235 PF02547 Queuosine biosynthesis protein F3113_RS19240 PF04336 Acyl carrier protein phosphodiesterase F3113_RS19245 PF10417 C-terminal domain of 1-Cys peroxiredoxin F3113_RS19245 PF00578 AhpC/TSA family F3113_RS19250 PF07969 Amidohydrolase family F3113_RS19260 PF00857 Isochorismatase family F3113_RS19265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS19265 PF03466 LysR substrate binding domain F3113_RS19270 PF02903 Alpha amylase, N-terminal ig-like domain F3113_RS19270 PF00128 Alpha amylase, catalytic domain F3113_RS19275 PF00324 Amino acid permease F3113_RS19280 PF05525 Branched-chain amino acid transport protein F3113_RS19285 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS19285 PF11808 Phosphate regulon sensor protein PhoR F3113_RS19285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS19285 PF00989 PAS fold F3113_RS19290 PF00072 Response regulator receiver domain F3113_RS19290 PF00486 Transcriptional regulatory protein, C terminal F3113_RS19295 PF12320 Type 5 capsule protein repressor C-terminal domain F3113_RS19295 PF00149 Calcineurin-like phosphoesterase F3113_RS19300 PF13476 AAA domain F3113_RS19305 PF07690 Major Facilitator Superfamily F3113_RS19310 PF00480 ROK family F3113_RS19315 PF04381 Putative exonuclease, RdgC F3113_RS19320 PF06865 Pyrimidine/purine nucleoside phosphorylase F3113_RS19325 PF07302 AroM protein F3113_RS19330 PF16362 YaiA protein F3113_RS19335 PF01202 Shikimate kinase F3113_RS19340 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 F3113_RS19345 PF03807 NADP oxidoreductase coenzyme F420-dependent F3113_RS19345 PF14748 Pyrroline-5-carboxylate reductase dimerisation F3113_RS19350 PF05230 MASE2 domain F3113_RS19350 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS19355 PF07769 psiF repeat F3113_RS19360 PF00245 Alkaline phosphatase F3113_RS19370 PF07690 Major Facilitator Superfamily F3113_RS19375 PF07478 D-ala D-ala ligase C-terminus F3113_RS19375 PF01820 D-ala D-ala ligase N-terminus F3113_RS19380 PF10953 Protein of unknown function (DUF2754) F3113_RS19385 PF10954 Protein of unknown function (DUF2755) F3113_RS19390 PF07759 Protein of unknown function (DUF1615) F3113_RS19395 PF05992 SbmA/BacA-like family F3113_RS19400 PF00144 Beta-lactamase F3113_RS19405 PF15977 Winged helix-turn-helix DNA binding F3113_RS19410 PF03797 Autotransporter beta-domain F3113_RS19415 PF00490 Delta-aminolevulinic acid dehydratase F3113_RS19420 PF02668 Taurine catabolism dioxygenase TauD, TfdA family F3113_RS19425 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS19430 PF00005 ABC transporter F3113_RS19435 PF04069 Substrate binding domain of ABC-type glycine betaine transport system F3113_RS19440 PF00072 Response regulator receiver domain F3113_RS19440 PF00196 Bacterial regulatory proteins, luxR family F3113_RS19445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS19445 PF05231 MASE1 F3113_RS19445 PF07730 Histidine kinase F3113_RS19450 PF07690 Major Facilitator Superfamily F3113_RS19460 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS19465 PF08402 TOBE domain F3113_RS19465 PF00005 ABC transporter F3113_RS19470 PF02574 Homocysteine S-methyltransferase F3113_RS19475 PF00324 Amino acid permease F3113_RS19480 PF07690 Major Facilitator Superfamily F3113_RS19485 PF00682 HMGL-like F3113_RS19485 PF07836 DmpG-like communication domain F3113_RS19490 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3113_RS19490 PF09290 Prokaryotic acetaldehyde dehydrogenase, dimerisation F3113_RS19495 PF01557 Fumarylacetoacetate (FAA) hydrolase family F3113_RS19500 PF12697 Alpha/beta hydrolase family F3113_RS19505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase F3113_RS19510 PF01494 FAD binding domain F3113_RS19515 PF01614 Bacterial transcriptional regulator F3113_RS19515 PF09339 IclR helix-turn-helix domain F3113_RS19540 PF10820 Protein of unknown function (DUF2543) F3113_RS19545 PF12706 Beta-lactamase superfamily domain F3113_RS19550 PF01965 DJ-1/PfpI family F3113_RS19560 PF00356 Bacterial regulatory proteins, lacI family F3113_RS19565 PF02929 Beta galactosidase small chain F3113_RS19565 PF02837 Glycosyl hydrolases family 2, sugar binding domain F3113_RS19565 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F3113_RS19565 PF00703 Glycosyl hydrolases family 2 F3113_RS19565 PF16353 Domain of unknown function(DUF4981) F3113_RS19570 PF01306 LacY proton/sugar symporter F3113_RS19575 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS19575 PF12464 Maltose acetyltransferase F3113_RS19580 PF13193 AMP-binding enzyme C-terminal domain F3113_RS19580 PF00501 AMP-binding enzyme F3113_RS19580 PF16177 Acetyl-coenzyme A synthetase N-terminus F3113_RS19585 PF03972 MmgE/PrpD family F3113_RS19590 PF00285 Citrate synthase, C-terminal domain F3113_RS19600 PF02954 Bacterial regulatory protein, Fis family F3113_RS19600 PF00158 Sigma-54 interaction domain F3113_RS19600 PF06506 Propionate catabolism activator F3113_RS19605 PF07338 Protein of unknown function (DUF1471) F3113_RS19610 PF01810 LysE type translocator F3113_RS19615 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS19620 PF12801 4Fe-4S binding domain F3113_RS19625 PF01380 SIS domain F3113_RS19625 PF01418 Helix-turn-helix domain, rpiR family F3113_RS19635 PF01032 FecCD transport family F3113_RS19640 PF01032 FecCD transport family F3113_RS19645 PF00005 ABC transporter F3113_RS19650 PF07715 TonB-dependent Receptor Plug Domain F3113_RS19660 PF07715 TonB-dependent Receptor Plug Domain F3113_RS19660 PF00593 TonB dependent receptor F3113_RS19670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS19670 PF03466 LysR substrate binding domain F3113_RS19690 PF03606 C4-dicarboxylate anaerobic carrier F3113_RS19695 PF01546 Peptidase family M20/M25/M40 F3113_RS19695 PF07687 Peptidase dimerisation domain F3113_RS19700 PF09857 Putative toxin of bacterial toxin-antitoxin pair F3113_RS19705 PF13847 Methyltransferase domain F3113_RS19710 PF01965 DJ-1/PfpI family F3113_RS19715 PF04371 Porphyromonas-type peptidyl-arginine deiminase F3113_RS19720 PF00563 EAL domain F3113_RS19720 PF05231 MASE1 F3113_RS19730 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS19730 PF17862 AAA+ lid domain F3113_RS19730 PF01434 Peptidase family M41 F3113_RS19735 PF00324 Amino acid permease F3113_RS19740 PF00120 Glutamine synthetase, catalytic domain F3113_RS19745 PF07722 Peptidase C26 F3113_RS19750 PF01381 Helix-turn-helix F3113_RS19750 PF07883 Cupin domain F3113_RS19755 PF00171 Aldehyde dehydrogenase family F3113_RS19760 PF01266 FAD dependent oxidoreductase F3113_RS19765 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit F3113_RS19765 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal F3113_RS19770 PF00374 Nickel-dependent hydrogenase F3113_RS19775 PF01292 Prokaryotic cytochrome b561 F3113_RS19780 PF01750 Hydrogenase maturation protease F3113_RS19785 PF07449 Hydrogenase-1 expression protein HyaE F3113_RS19790 PF04809 HupH hydrogenase expression protein, C-terminal conserved region F3113_RS19795 PF01654 Cytochrome bd terminal oxidase subunit I F3113_RS19800 PF02322 Cytochrome bd terminal oxidase subunit II F3113_RS19805 PF08173 Membrane bound YbgT-like protein F3113_RS19815 PF00392 Bacterial regulatory proteins, gntR family F3113_RS19815 PF00155 Aminotransferase class I and II F3113_RS19830 PF03553 Na+/H+ antiporter family F3113_RS19835 PF00155 Aminotransferase class I and II F3113_RS19845 PF13356 Arm DNA-binding domain F3113_RS19845 PF00589 Phage integrase family F3113_RS19880 PF03050 Transposase IS66 family F3113_RS19880 PF13817 IS66 C-terminal element F3113_RS19880 PF13007 Transposase C of IS166 homeodomain F3113_RS19880 PF13005 zinc-finger binding domain of transposase IS66 F3113_RS19885 PF05717 IS66 Orf2 like protein F3113_RS19900 PF00294 pfkB family carbohydrate kinase F3113_RS19905 PF11471 Maltoporin periplasmic N-terminal extension F3113_RS19905 PF02264 LamB porin F3113_RS19910 PF02378 Phosphotransferase system, EIIC F3113_RS19910 PF00367 phosphotransferase system, EIIB F3113_RS19915 PF00251 Glycosyl hydrolases family 32 N-terminal domain F3113_RS19915 PF08244 Glycosyl hydrolases family 32 C terminal F3113_RS19920 PF00356 Bacterial regulatory proteins, lacI family F3113_RS19930 PF13936 Helix-turn-helix domain F3113_RS19930 PF00665 Integrase core domain F3113_RS19950 PF01926 50S ribosome-binding GTPase F3113_RS19955 PF06067 Domain of unknown function (DUF932) F3113_RS19960 PF08220 DeoR-like helix-turn-helix domain F3113_RS19960 PF13280 WYL domain F3113_RS19985 PF10011 Predicted membrane protein (DUF2254) F3113_RS19990 PF02028 BCCT, betaine/carnitine/choline family transporter F3113_RS20000 PF03230 Antirestriction protein F3113_RS20005 PF04002 RadC-like JAB domain F3113_RS20010 PF06174 Protein of unknown function (DUF987) F3113_RS20015 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A F3113_RS20020 PF06755 CbtA_toxin of type IV toxin-antitoxin system F3113_RS20150 PF04466 Phage terminase large subunit F3113_RS20150 PF17288 Terminase RNAseH like domain F3113_RS20175 PF00182 Chitinase class I F3113_RS20205 PF05866 Endodeoxyribonuclease RusA F3113_RS20245 PF03796 DnaB-like helicase C terminal domain F3113_RS20245 PF00772 DnaB-like helicase N terminal domain F3113_RS20275 PF00717 Peptidase S24-like F3113_RS20305 PF00929 Exonuclease F3113_RS20315 PF00436 Single-strand binding protein family F3113_RS20325 PF02086 D12 class N6 adenine-specific DNA methyltransferase F3113_RS20340 PF00589 Phage integrase family F3113_RS20350 PF04191 Phospholipid methyltransferase F3113_RS20355 PF00563 EAL domain F3113_RS20355 PF12792 CSS motif domain associated with EAL F3113_RS20380 PF15976 CS1-pili formation C-terminal F3113_RS20380 PF16967 E-set like domain F3113_RS20385 PF18649 EcpB C-terminal domain F3113_RS20390 PF16449 Fimbrillin MatB F3113_RS20395 PF00325 Bacterial regulatory proteins, crp family F3113_RS20395 PF00027 Cyclic nucleotide-binding domain F3113_RS20400 PF00171 Aldehyde dehydrogenase family F3113_RS20405 PF01472 PUA domain F3113_RS20405 PF00696 Amino acid kinase family F3113_RS20410 PF00267 Gram-negative porin F3113_RS20415 PF07417 Sigma factor-binding transcriptional regulator Crl F3113_RS20420 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) F3113_RS20425 PF00156 Phosphoribosyl transferase domain F3113_RS20430 PF07687 Peptidase dimerisation domain F3113_RS20430 PF01546 Peptidase family M20/M25/M40 F3113_RS20435 PF11798 IMS family HHH motif F3113_RS20435 PF11799 impB/mucB/samB family C-terminal domain F3113_RS20435 PF00817 impB/mucB/samB family F3113_RS20445 PF00691 OmpA family F3113_RS20445 PF13677 Membrane MotB of proton-channel complex MotA/MotB F3113_RS20450 PF00771 FHIPEP family F3113_RS20455 PF00877 NlpC/P60 family F3113_RS20460 PF03734 L,D-transpeptidase catalytic domain F3113_RS20465 PF13230 Glutamine amidotransferases class-II F3113_RS20470 PF13580 SIS domain F3113_RS20475 PF09317 Domain of unknown function (DUF1974) F3113_RS20475 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3113_RS20475 PF02770 Acyl-CoA dehydrogenase, middle domain F3113_RS20475 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3113_RS20480 PF00795 Carbon-nitrogen hydrolase F3113_RS20490 PF00563 EAL domain F3113_RS20505 PF00419 Fimbrial protein F3113_RS20515 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS20515 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS20520 PF13953 PapC C-terminal domain F3113_RS20520 PF13954 PapC N-terminal domain F3113_RS20520 PF00577 Outer membrane usher protein F3113_RS20530 PF00419 Fimbrial protein F3113_RS20535 PF00072 Response regulator receiver domain F3113_RS20535 PF00486 Transcriptional regulatory protein, C terminal F3113_RS20550 PF00929 Exonuclease F3113_RS20555 PF00075 RNase H F3113_RS20560 PF08241 Methyltransferase domain F3113_RS20565 PF16123 Hydroxyacylglutathione hydrolase C-terminus F3113_RS20565 PF00753 Metallo-beta-lactamase superfamily F3113_RS20570 PF01464 Transglycosylase SLT domain F3113_RS20570 PF01476 LysM domain F3113_RS20575 PF08241 Methyltransferase domain F3113_RS20580 PF03372 Endonuclease/Exonuclease/phosphatase family F3113_RS20585 PF07690 Major Facilitator Superfamily F3113_RS20590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS20590 PF03466 LysR substrate binding domain F3113_RS20595 PF00248 Aldo/keto reductase family F3113_RS20630 PF09383 NIL domain F3113_RS20630 PF00005 ABC transporter F3113_RS20635 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS20640 PF03180 NLPA lipoprotein F3113_RS20645 PF16358 RcsF lipoprotein F3113_RS20650 PF01980 tRNA-methyltransferase O F3113_RS20650 PF18389 TrmO C-terminal domain F3113_RS20655 PF04073 Aminoacyl-tRNA editing domain F3113_RS20655 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) F3113_RS20655 PF03129 Anticodon binding domain F3113_RS20660 PF04170 NlpE N-terminal domain F3113_RS20660 PF17185 NlpE C-terminal OB domain F3113_RS20665 PF00472 RF-1 domain F3113_RS20670 PF07152 YaeQ protein F3113_RS20675 PF06786 Uncharacterised protein family (UPF0253) F3113_RS20680 PF07073 Modulator of Rho-dependent transcription termination (ROF) F3113_RS20685 PF01171 PP-loop family F3113_RS20685 PF09179 TilS substrate binding domain F3113_RS20685 PF11734 TilS substrate C-terminal domain F3113_RS20690 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily F3113_RS20695 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F3113_RS20695 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3113_RS20695 PF01276 Orn/Lys/Arg decarboxylase, major domain F3113_RS20700 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit F3113_RS20705 PF17657 Bacterial DNA polymerase III alpha subunit finger domain F3113_RS20705 PF01336 OB-fold nucleic acid binding domain F3113_RS20705 PF07733 Bacterial DNA polymerase III alpha NTPase domain F3113_RS20705 PF02811 PHP domain F3113_RS20705 PF14579 Helix-hairpin-helix motif F3113_RS20710 PF01351 Ribonuclease HII F3113_RS20715 PF02684 Lipid-A-disaccharide synthetase F3113_RS20720 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 F3113_RS20720 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS20725 PF07977 FabA-like domain F3113_RS20730 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS20730 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD F3113_RS20735 PF03938 Outer membrane protein (OmpH-like) F3113_RS20740 PF01103 Surface antigen F3113_RS20740 PF07244 Surface antigen variable number repeat F3113_RS20745 PF17820 PDZ domain F3113_RS20745 PF02163 Peptidase family M50 F3113_RS20755 PF01255 Putative undecaprenyl diphosphate synthase F3113_RS20760 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain F3113_RS20760 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase F3113_RS20760 PF13288 DXP reductoisomerase C-terminal domain F3113_RS20765 PF01765 Ribosome recycling factor F3113_RS20770 PF00696 Amino acid kinase family F3113_RS20775 PF00889 Elongation factor TS F3113_RS20780 PF00318 Ribosomal protein S2 F3113_RS20785 PF00557 Metallopeptidase family M24 F3113_RS20790 PF01966 HD domain F3113_RS20790 PF01842 ACT domain F3113_RS20790 PF08335 GlnD PII-uridylyltransferase F3113_RS20790 PF01909 Nucleotidyltransferase domain F3113_RS20795 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS20795 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal F3113_RS20795 PF14602 Hexapeptide repeat of succinyl-transferase F3113_RS20800 PF11944 Protein of unknown function (DUF3461) F3113_RS20805 PF17853 GGDEF-like domain F3113_RS20805 PF13556 PucR C-terminal helix-turn-helix domain F3113_RS20805 PF05651 Putative sugar diacid recognition F3113_RS20810 PF00595 PDZ domain F3113_RS20815 PF13286 Phosphohydrolase-associated domain F3113_RS20815 PF01966 HD domain F3113_RS20820 PF01048 Phosphorylase superfamily F3113_RS20825 PF01497 Periplasmic binding protein F3113_RS20830 PF03458 UPF0126 domain F3113_RS20835 PF01521 Iron-sulphur cluster biosynthesis F3113_RS20840 PF00654 Voltage gated chloride channel F3113_RS20845 PF00202 Aminotransferase class-III F3113_RS20850 PF01032 FecCD transport family F3113_RS20855 PF01497 Periplasmic binding protein F3113_RS20860 PF00005 ABC transporter F3113_RS20865 PF07715 TonB-dependent Receptor Plug Domain F3113_RS20865 PF00593 TonB dependent receptor F3113_RS20870 PF00419 Fimbrial protein F3113_RS20875 PF13954 PapC N-terminal domain F3113_RS20875 PF13953 PapC C-terminal domain F3113_RS20875 PF00577 Outer membrane usher protein F3113_RS20880 PF02753 Pili assembly chaperone PapD, C-terminal domain F3113_RS20880 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain F3113_RS20885 PF16970 Type-1 fimbrial protein, A F3113_RS20890 PF00912 Transglycosylase F3113_RS20890 PF14814 Bifunctional transglycosylase second domain F3113_RS20890 PF00905 Penicillin binding protein transpeptidase domain F3113_RS20890 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal F3113_RS20895 PF00270 DEAD/DEAH box helicase F3113_RS20895 PF08482 ATP-dependent helicase C-terminal F3113_RS20895 PF04408 Helicase associated domain (HA2) F3113_RS20895 PF00271 Helicase conserved C-terminal domain F3113_RS20900 PF02834 LigT like Phosphoesterase F3113_RS20905 PF03749 Sugar fermentation stimulation protein RE domain F3113_RS20905 PF17746 SfsA N-terminal OB domain F3113_RS20910 PF01258 Prokaryotic dksA/traR C4-type zinc finger F3113_RS20915 PF00749 tRNA synthetases class I (E and Q), catalytic domain F3113_RS20920 PF01743 Poly A polymerase head domain F3113_RS20920 PF12627 Probable RNA and SrmB- binding site of polymerase A F3113_RS20920 PF12626 Polymerase A arginine-rich C-terminus F3113_RS20925 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) F3113_RS20930 PF02548 Ketopantoate hydroxymethyltransferase F3113_RS20935 PF02569 Pantoate-beta-alanine ligase F3113_RS20940 PF02261 Aspartate decarboxylase F3113_RS20945 PF01522 Polysaccharide deacetylase F3113_RS20950 PF03610 PTS system fructose IIA component F3113_RS20955 PF01061 ABC-2 type transporter F3113_RS20960 PF00005 ABC transporter F3113_RS20965 PF00484 Carbonic anhydrase F3113_RS20970 PF00156 Phosphoribosyl transferase domain F3113_RS20975 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS20975 PF02203 Tar ligand binding domain homologue F3113_RS20975 PF00672 HAMP domain F3113_RS20980 PF07731 Multicopper oxidase F3113_RS20980 PF07732 Multicopper oxidase F3113_RS20980 PF00394 Multicopper oxidase F3113_RS20985 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) F3113_RS20990 PF06062 Uncharacterised protein family (UPF0231) F3113_RS20995 PF06434 Aconitate hydratase 2 N-terminus F3113_RS20995 PF11791 Aconitate B N-terminal domain F3113_RS20995 PF00330 Aconitase family (aconitate hydratase) F3113_RS21000 PF11737 Protein of unknown function (DUF3300) F3113_RS21010 PF05818 Enterobacterial TraT complement resistance protein F3113_RS21015 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3113_RS21015 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS21020 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) F3113_RS21020 PF00364 Biotin-requiring enzyme F3113_RS21020 PF02817 e3 binding domain F3113_RS21025 PF00456 Transketolase, thiamine diphosphate binding domain F3113_RS21025 PF17831 Pyruvate dehydrogenase E1 component middle domain F3113_RS21030 PF00392 Bacterial regulatory proteins, gntR family F3113_RS21030 PF07729 FCD domain F3113_RS21035 PF00324 Amino acid permease F3113_RS21045 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain F3113_RS21045 PF04616 Glycosyl hydrolases family 43 F3113_RS21050 PF17113 Regulatory signalling modulator protein AmpE F3113_RS21055 PF01510 N-acetylmuramoyl-L-alanine amidase F3113_RS21060 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain F3113_RS21060 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain F3113_RS21065 PF07963 Prokaryotic N-terminal methylation motif F3113_RS21070 PF00437 Type II/IV secretion system protein F3113_RS21070 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain F3113_RS21075 PF00482 Type II secretion system (T2SS), protein F F3113_RS21080 PF00478 IMP dehydrogenase / GMP reductase domain F3113_RS21085 PF01121 Dephospho-CoA kinase F3113_RS21090 PF07072 Cell division protein F3113_RS21095 PF03884 DNA gyrase inhibitor YacG F3113_RS21100 PF00293 NUDIX domain F3113_RS21105 PF02810 SEC-C motif F3113_RS21105 PF07517 SecA DEAD-like domain F3113_RS21105 PF01043 SecA preprotein cross-linking domain F3113_RS21105 PF07516 SecA Wing and Scaffold domain F3113_RS21110 PF06558 Secretion monitor precursor protein (SecM) F3113_RS21115 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase F3113_RS21120 PF00091 Tubulin/FtsZ family, GTPase domain F3113_RS21120 PF12327 FtsZ family, C-terminal domain F3113_RS21125 PF02491 SHS2 domain inserted in FTSA F3113_RS21130 PF08478 POTRA domain, FtsQ-type F3113_RS21130 PF03799 Cell division protein FtsQ F3113_RS21135 PF07478 D-ala D-ala ligase C-terminus F3113_RS21135 PF01820 D-ala D-ala ligase N-terminus F3113_RS21140 PF02875 Mur ligase family, glutamate ligase domain F3113_RS21140 PF01225 Mur ligase family, catalytic domain F3113_RS21140 PF08245 Mur ligase middle domain F3113_RS21145 PF03033 Glycosyltransferase family 28 N-terminal domain F3113_RS21145 PF04101 Glycosyltransferase family 28 C-terminal domain F3113_RS21150 PF01098 Cell cycle protein F3113_RS21155 PF02875 Mur ligase family, glutamate ligase domain F3113_RS21155 PF08245 Mur ligase middle domain F3113_RS21160 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 F3113_RS21160 PF00953 Glycosyl transferase family 4 F3113_RS21165 PF01225 Mur ligase family, catalytic domain F3113_RS21165 PF02875 Mur ligase family, glutamate ligase domain F3113_RS21165 PF08245 Mur ligase middle domain F3113_RS21170 PF02875 Mur ligase family, glutamate ligase domain F3113_RS21170 PF08245 Mur ligase middle domain F3113_RS21170 PF01225 Mur ligase family, catalytic domain F3113_RS21175 PF03717 Penicillin-binding Protein dimerisation domain F3113_RS21175 PF00905 Penicillin binding protein transpeptidase domain F3113_RS21180 PF04999 Cell division protein FtsL F3113_RS21185 PF01795 MraW methylase family F3113_RS21190 PF02381 MraZ protein, putative antitoxin-like F3113_RS21195 PF00356 Bacterial regulatory proteins, lacI family F3113_RS21195 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family F3113_RS21200 PF10369 Small subunit of acetolactate synthase F3113_RS21205 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS21205 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS21205 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS21210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS21210 PF03466 LysR substrate binding domain F3113_RS21215 PF08054 Leucine operon leader peptide F3113_RS21220 PF00682 HMGL-like F3113_RS21220 PF08502 LeuA allosteric (dimerisation) domain F3113_RS21225 PF00180 Isocitrate/isopropylmalate dehydrogenase F3113_RS21230 PF00330 Aconitase family (aconitate hydratase) F3113_RS21235 PF00694 Aconitase C-terminal domain F3113_RS21240 PF00356 Bacterial regulatory proteins, lacI family F3113_RS21245 PF07690 Major Facilitator Superfamily F3113_RS21250 PF00106 short chain dehydrogenase F3113_RS21255 PF07690 Major Facilitator Superfamily F3113_RS21265 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle F3113_RS21265 PF12793 Sugar transport-related sRNA regulator N-term F3113_RS21275 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS21280 PF00005 ABC transporter F3113_RS21285 PF09335 SNARE associated Golgi protein F3113_RS21290 PF02311 AraC-like ligand binding domain F3113_RS21290 PF12833 Helix-turn-helix domain F3113_RS21295 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS21300 PF02610 L-arabinose isomerase F3113_RS21300 PF11762 L-arabinose isomerase C-terminal domain F3113_RS21305 PF00596 Class II Aldolase and Adducin N-terminal domain F3113_RS21315 PF00136 DNA polymerase family B F3113_RS21315 PF03104 DNA polymerase family B, exonuclease domain F3113_RS21320 PF00176 SNF2 family N-terminal domain F3113_RS21320 PF18339 RapA N-terminal Tudor like domain 1 F3113_RS21320 PF12137 RNA polymerase recycling family C-terminal F3113_RS21320 PF18337 RapA N-terminal Tudor like domain F3113_RS21320 PF00271 Helicase conserved C-terminal domain F3113_RS21325 PF00849 RNA pseudouridylate synthase F3113_RS21330 PF00226 DnaJ domain F3113_RS21330 PF05099 Tellurite resistance protein TerB F3113_RS21335 PF04453 LPS transport system D F3113_RS21335 PF03968 OstA-like protein F3113_RS21340 PF00639 PPIC-type PPIASE domain F3113_RS21340 PF09312 SurA N-terminal domain F3113_RS21345 PF04166 Pyridoxal phosphate biosynthetic protein PdxA F3113_RS21350 PF00398 Ribosomal RNA adenine dimethylase F3113_RS21355 PF04379 ApaG domain F3113_RS21360 PF00149 Calcineurin-like phosphoesterase F3113_RS21365 PF00186 Dihydrofolate reductase F3113_RS21370 PF00999 Sodium/hydrogen exchanger family F3113_RS21370 PF02254 TrkA-N domain F3113_RS21375 PF02525 Flavodoxin-like fold F3113_RS21380 PF06004 Bacterial protein of unknown function (DUF903) F3113_RS21385 PF00083 Sugar (and other) transporter F3113_RS21395 PF01494 FAD binding domain F3113_RS21400 PF00766 Electron transfer flavoprotein FAD-binding domain F3113_RS21400 PF01012 Electron transfer flavoprotein domain F3113_RS21405 PF01012 Electron transfer flavoprotein domain F3113_RS21410 PF02028 BCCT, betaine/carnitine/choline family transporter F3113_RS21415 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3113_RS21415 PF02771 Acyl-CoA dehydrogenase, N-terminal domain F3113_RS21415 PF02770 Acyl-CoA dehydrogenase, middle domain F3113_RS21420 PF02515 CoA-transferase family III F3113_RS21425 PF00501 AMP-binding enzyme F3113_RS21425 PF13193 AMP-binding enzyme C-terminal domain F3113_RS21430 PF00378 Enoyl-CoA hydratase/isomerase F3113_RS21435 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS21440 PF07180 CaiF/GrlA transcriptional regulator F3113_RS21445 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain F3113_RS21445 PF02142 MGS-like domain F3113_RS21445 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain F3113_RS21450 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain F3113_RS21450 PF00117 Glutamine amidotransferase class-I F3113_RS21455 PF05173 Dihydrodipicolinate reductase, C-terminus F3113_RS21455 PF01113 Dihydrodipicolinate reductase, N-terminus F3113_RS21460 PF01156 Inosine-uridine preferring nucleoside hydrolase F3113_RS21465 PF02401 LytB protein F3113_RS21470 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3113_RS21475 PF01252 Signal peptidase (SPase) II F3113_RS21480 PF08264 Anticodon-binding domain of tRNA F3113_RS21480 PF00133 tRNA synthetases class I (I, L, M and V) F3113_RS21480 PF06827 Zinc finger found in FPG and IleRS F3113_RS21485 PF06574 FAD synthetase F3113_RS21485 PF01687 Riboflavin kinase F3113_RS21490 PF01649 Ribosomal protein S20 F3113_RS21500 PF01055 Glycosyl hydrolases family 31 F3113_RS21505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS21505 PF03466 LysR substrate binding domain F3113_RS21510 PF06965 Na+/H+ antiporter 1 F3113_RS21520 PF04055 Radical SAM superfamily F3113_RS21520 PF13186 Iron-sulfur cluster-binding domain F3113_RS21525 PF00884 Sulfatase F3113_RS21525 PF16385 Domain of unknown function F3113_RS21535 PF00684 DnaJ central domain F3113_RS21535 PF01556 DnaJ C terminal domain F3113_RS21535 PF00226 DnaJ domain F3113_RS21540 PF00012 Hsp70 protein F3113_RS21545 PF10807 Protein of unknown function (DUF2541) F3113_RS21550 PF13099 Domain of unknown function (DUF3944) F3113_RS21550 PF03981 Ubiquinol-cytochrome C chaperone F3113_RS21555 PF01184 GPR1/FUN34/yaaH family F3113_RS21565 PF00994 Probable molybdopterin binding domain F3113_RS21570 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3113_RS21575 PF01235 Sodium:alanine symporter family F3113_RS21580 PF03883 Peroxide stress protein YaaA F3113_RS21585 PF14821 Threonine synthase N terminus F3113_RS21585 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS21590 PF08544 GHMP kinases C terminal F3113_RS21590 PF00288 GHMP kinases N terminal domain F3113_RS21595 PF00696 Amino acid kinase family F3113_RS21595 PF01842 ACT domain F3113_RS21595 PF13840 ACT domain F3113_RS21595 PF00742 Homoserine dehydrogenase F3113_RS21595 PF03447 Homoserine dehydrogenase, NAD binding domain F3113_RS21605 PF00588 SpoU rRNA Methylase family F3113_RS21615 PF00486 Transcriptional regulatory protein, C terminal F3113_RS21615 PF00072 Response regulator receiver domain F3113_RS21620 PF06123 Inner membrane protein CreD F3113_RS21625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS21625 PF00672 HAMP domain F3113_RS21625 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS21630 PF00072 Response regulator receiver domain F3113_RS21630 PF00486 Transcriptional regulatory protein, C terminal F3113_RS21635 PF05981 CreA protein F3113_RS21640 PF06445 GyrI-like small molecule binding domain F3113_RS21640 PF12833 Helix-turn-helix domain F3113_RS21645 PF00300 Histidine phosphatase superfamily (branch 1) F3113_RS21650 PF01931 Protein of unknown function DUF84 F3113_RS21655 PF01371 Trp repressor protein F3113_RS21660 PF01464 Transglycosylase SLT domain F3113_RS21660 PF14718 Soluble lytic murein transglycosylase L domain F3113_RS21670 PF00005 ABC transporter F3113_RS21670 PF12848 ABC transporter F3113_RS21675 PF13521 AAA domain F3113_RS21675 PF01381 Helix-turn-helix F3113_RS21680 PF18073 Rubredoxin metal binding domain F3113_RS21685 PF18429 Domain of unknown function (DUF5609) F3113_RS21690 PF10144 Bacterial virulence factor haemolysin F3113_RS21695 PF03099 Biotin/lipoate A/B protein ligase family F3113_RS21695 PF10437 Bacterial lipoate protein ligase C-terminus F3113_RS21700 PF01048 Phosphorylase superfamily F3113_RS21705 PF01676 Metalloenzyme superfamily F3113_RS21710 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain F3113_RS21710 PF00591 Glycosyl transferase family, a/b domain F3113_RS21710 PF02885 Glycosyl transferase family, helical bundle domain F3113_RS21715 PF07690 Major Facilitator Superfamily F3113_RS21720 PF00392 Bacterial regulatory proteins, gntR family F3113_RS21720 PF07729 FCD domain F3113_RS21725 PF00107 Zinc-binding dehydrogenase F3113_RS21725 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS21730 PF08125 Mannitol dehydrogenase C-terminal domain F3113_RS21730 PF01232 Mannitol dehydrogenase Rossmann domain F3113_RS21735 PF00884 Sulfatase F3113_RS21740 PF10696 Protein of unknown function (DUF2501) F3113_RS21745 PF01695 IstB-like ATP binding protein F3113_RS21750 PF17948 DnaT DNA-binding domain F3113_RS21755 PF12821 Threonine/Serine exporter, ThrE F3113_RS21760 PF06738 Putative threonine/serine exporter F3113_RS21765 PF00196 Bacterial regulatory proteins, luxR family F3113_RS21770 PF00196 Bacterial regulatory proteins, luxR family F3113_RS21775 PF04073 Aminoacyl-tRNA editing domain F3113_RS21780 PF02378 Phosphotransferase system, EIIC F3113_RS21785 PF11575 FhuF 2Fe-2S C-terminal domain F3113_RS21785 PF06276 Ferric iron reductase FhuF-like transporter F3113_RS21790 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS21790 PF05230 MASE2 domain F3113_RS21795 PF07256 Protein of unknown function (DUF1435) F3113_RS21805 PF05175 Methyltransferase small domain F3113_RS21805 PF08468 Methyltransferase small domain N-terminal F3113_RS21810 PF03603 DNA polymerase III psi subunit F3113_RS21815 PF00583 Acetyltransferase (GNAT) family F3113_RS21820 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS21825 PF00009 Elongation factor Tu GTP binding domain F3113_RS21825 PF16658 Class II release factor RF3, C-terminal domain F3113_RS21825 PF03144 Elongation factor Tu domain 2 F3113_RS21830 PF04972 BON domain F3113_RS21835 PF07043 Protein of unknown function (DUF1328) F3113_RS21840 PF01734 Patatin-like phospholipase F3113_RS21845 PF01026 TatD related DNase F3113_RS21850 PF04055 Radical SAM superfamily F3113_RS21855 PF11230 Protein of unknown function (DUF3029) F3113_RS21860 PF01791 DeoC/LacD family aldolase F3113_RS21905 PF13356 Arm DNA-binding domain F3113_RS21905 PF00589 Phage integrase family F3113_RS21915 PF00107 Zinc-binding dehydrogenase F3113_RS21915 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS21920 PF05872 Bacterial protein of unknown function (DUF853) F3113_RS21925 PF03739 Lipopolysaccharide export system permease LptF/LptG F3113_RS21930 PF03739 Lipopolysaccharide export system permease LptF/LptG F3113_RS21935 PF00883 Cytosol aminopeptidase family, catalytic domain F3113_RS21935 PF02789 Cytosol aminopeptidase family, N-terminal domain F3113_RS21940 PF04364 DNA polymerase III chi subunit, HolC F3113_RS21945 PF00133 tRNA synthetases class I (I, L, M and V) F3113_RS21945 PF10458 Valyl tRNA synthetase tRNA binding arm F3113_RS21945 PF08264 Anticodon-binding domain of tRNA F3113_RS21950 PF00583 Acetyltransferase (GNAT) family F3113_RS21960 PF06175 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE) F3113_RS21965 PF06877 Regulator of ribonuclease activity B F3113_RS21970 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3113_RS21970 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3113_RS21975 PF04074 YhcH/YjgK/YiaL F3113_RS21985 PF00696 Amino acid kinase family F3113_RS21990 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3113_RS21990 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3113_RS21995 PF03606 C4-dicarboxylate anaerobic carrier F3113_RS22000 PF01316 Arginine repressor, DNA binding domain F3113_RS22000 PF02863 Arginine repressor, C-terminal domain F3113_RS22010 PF08052 PyrBI operon leader peptide F3113_RS22020 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain F3113_RS22020 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain F3113_RS22025 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain F3113_RS22025 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain F3113_RS22030 PF01042 Endoribonuclease L-PSP F3113_RS22035 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component F3113_RS22045 PF03480 Bacterial extracellular solute-binding protein, family 7 F3113_RS22050 PF00689 Cation transporting ATPase, C-terminus F3113_RS22050 PF00690 Cation transporter/ATPase, N-terminus F3113_RS22055 PF00356 Bacterial regulatory proteins, lacI family F3113_RS22060 PF00367 phosphotransferase system, EIIB F3113_RS22060 PF02378 Phosphotransferase system, EIIC F3113_RS22065 PF00128 Alpha amylase, catalytic domain F3113_RS22065 PF11941 Domain of unknown function (DUF3459) F3113_RS22075 PF01380 SIS domain F3113_RS22075 PF01418 Helix-turn-helix domain, rpiR family F3113_RS22080 PF02378 Phosphotransferase system, EIIC F3113_RS22085 PF01074 Glycosyl hydrolases family 38 N-terminal domain F3113_RS22085 PF09261 Alpha mannosidase middle domain F3113_RS22085 PF07748 Glycosyl hydrolases family 38 C-terminal domain F3113_RS22090 PF00128 Alpha amylase, catalytic domain F3113_RS22095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS22095 PF02378 Phosphotransferase system, EIIC F3113_RS22095 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS22100 PF13597 Anaerobic ribonucleoside-triphosphate reductase F3113_RS22100 PF03477 ATP cone domain F3113_RS22110 PF05016 ParE toxin of type II toxin-antitoxin system, parDE F3113_RS22115 PF04221 RelB antitoxin F3113_RS22120 PF08279 HTH domain F3113_RS22120 PF05043 Mga helix-turn-helix domain F3113_RS22120 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS22120 PF00874 PRD domain F3113_RS22125 PF07071 KDGP aldolase F3113_RS22130 PF03841 L-seryl-tRNA selenium transferase F3113_RS22135 PF01979 Amidohydrolase family F3113_RS22165 PF07361 Cytochrome b562 F3113_RS22170 PF01523 Putative modulator of DNA gyrase F3113_RS22175 PF04751 Protein of unknown function (DUF615) F3113_RS22180 PF02875 Mur ligase family, glutamate ligase domain F3113_RS22180 PF08245 Mur ligase middle domain F3113_RS22180 PF01225 Mur ligase family, catalytic domain F3113_RS22185 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain F3113_RS22190 PF00672 HAMP domain F3113_RS22190 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS22190 PF02203 Tar ligand binding domain homologue F3113_RS22195 PF02653 Branched-chain amino acid transport system / permease component F3113_RS22200 PF02653 Branched-chain amino acid transport system / permease component F3113_RS22205 PF00005 ABC transporter F3113_RS22210 PF13407 Periplasmic binding protein domain F3113_RS22215 PF00719 Inorganic pyrophosphatase F3113_RS22220 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like F3113_RS22225 PF04357 TamB, inner membrane protein subunit of TAM complex F3113_RS22230 PF01103 Surface antigen F3113_RS22230 PF07244 Surface antigen variable number repeat F3113_RS22230 PF17243 POTRA domain TamA domain 1 F3113_RS22235 PF01625 Peptide methionine sulfoxide reductase F3113_RS22240 PF01595 Cyclin M transmembrane N-terminal domain F3113_RS22240 PF03471 Transporter associated domain F3113_RS22240 PF00571 CBS domain F3113_RS22245 PF06526 Protein of unknown function (DUF1107) F3113_RS22250 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) F3113_RS22255 PF00459 Inositol monophosphatase family F3113_RS22260 PF02872 5'-nucleotidase, C-terminal domain F3113_RS22260 PF00149 Calcineurin-like phosphoesterase F3113_RS22265 PF01638 HxlR-like helix-turn-helix F3113_RS22270 PF05368 NmrA-like family F3113_RS22280 PF00892 EamA-like transporter family F3113_RS22285 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain F3113_RS22285 PF02203 Tar ligand binding domain homologue F3113_RS22285 PF00672 HAMP domain F3113_RS22290 PF04405 Domain of Unknown function (DUF542) F3113_RS22290 PF01814 Hemerythrin HHE cation binding domain F3113_RS22295 PF00324 Amino acid permease F3113_RS22300 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase F3113_RS22300 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase F3113_RS22305 PF04225 Opacity-associated protein A LysM-like domain F3113_RS22305 PF08525 Opacity-associated protein A N-terminal motif F3113_RS22315 PF01281 Ribosomal protein L9, N-terminal domain F3113_RS22315 PF03948 Ribosomal protein L9, C-terminal domain F3113_RS22320 PF01084 Ribosomal protein S18 F3113_RS22325 PF00436 Single-strand binding protein family F3113_RS22330 PF01250 Ribosomal protein S6 F3113_RS22335 PF01925 Sulfite exporter TauE/SafE F3113_RS22340 PF07338 Protein of unknown function (DUF1471) F3113_RS22345 PF00596 Class II Aldolase and Adducin N-terminal domain F3113_RS22350 PF01261 Xylose isomerase-like TIM barrel F3113_RS22355 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family F3113_RS22360 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS22365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS22370 PF03611 PTS system sugar-specific permease component F3113_RS22380 PF00455 DeoR C terminal sensor domain F3113_RS22380 PF08220 DeoR-like helix-turn-helix domain F3113_RS22385 PF00326 Prolyl oligopeptidase family F3113_RS22390 PF07338 Protein of unknown function (DUF1471) F3113_RS22395 PF07338 Protein of unknown function (DUF1471) F3113_RS22400 PF00441 Acyl-CoA dehydrogenase, C-terminal domain F3113_RS22400 PF02770 Acyl-CoA dehydrogenase, middle domain F3113_RS22400 PF18158 Adaptive response protein AidB N-terminal domain F3113_RS22405 PF08032 RNA 2'-O ribose methyltransferase substrate binding F3113_RS22405 PF00588 SpoU rRNA Methylase family F3113_RS22410 PF08461 Ribonuclease R winged-helix domain F3113_RS22410 PF08206 Ribonuclease B OB domain F3113_RS22410 PF00773 RNB domain F3113_RS22410 PF17876 Cold shock domain F3113_RS22410 PF00575 S1 RNA binding domain F3113_RS22415 PF02082 Transcriptional regulator F3113_RS22420 PF00709 Adenylosuccinate synthetase F3113_RS22425 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) F3113_RS22430 PF01145 SPFH domain / Band 7 family F3113_RS22435 PF01145 SPFH domain / Band 7 family F3113_RS22435 PF12221 Bacterial membrane protein N terminal F3113_RS22440 PF13167 GTP-binding GTPase N-terminal F3113_RS22440 PF01926 50S ribosome-binding GTPase F3113_RS22440 PF16360 GTP-binding GTPase Middle Region F3113_RS22445 PF17209 Hfq protein F3113_RS22455 PF01119 DNA mismatch repair protein, C-terminal domain F3113_RS22455 PF08676 MutL C terminal dimerisation domain F3113_RS22460 PF01520 N-acetylmuramoyl-L-alanine amidase F3113_RS22465 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE F3113_RS22470 PF01256 Carbohydrate kinase F3113_RS22470 PF03853 YjeF-related protein N-terminus F3113_RS22475 PF08331 Domain of unknown function (DUF1730) F3113_RS22485 PF00929 Exonuclease F3113_RS22490 PF03193 RsgA GTPase F3113_RS22495 PF02666 Phosphatidylserine decarboxylase F3113_RS22500 PF12795 Mechanosensitive ion channel porin domain F3113_RS22500 PF12794 Mechanosensitive ion channel inner membrane domain 1 F3113_RS22500 PF00924 Mechanosensitive ion channel F3113_RS22505 PF13520 Amino acid permease F3113_RS22510 PF00152 tRNA synthetases class II (D, K and N) F3113_RS22515 PF00890 FAD binding domain F3113_RS22515 PF02910 Fumarate reductase flavoprotein C-term F3113_RS22520 PF13183 4Fe-4S dicluster domain F3113_RS22520 PF13085 2Fe-2S iron-sulfur cluster binding domain F3113_RS22525 PF02300 Fumarate reductase subunit C F3113_RS22530 PF02313 Fumarate reductase subunit D F3113_RS22535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS22535 PF03466 LysR substrate binding domain F3113_RS22540 PF00144 Beta-lactamase F3113_RS22545 PF08212 Lipocalin-like domain F3113_RS22550 PF00893 Small Multidrug Resistance protein F3113_RS22555 PF00196 Bacterial regulatory proteins, luxR family F3113_RS22560 PF08085 Entericidin EcnA/B family F3113_RS22565 PF08085 Entericidin EcnA/B family F3113_RS22570 PF01132 Elongation factor P (EF-P) OB domain F3113_RS22570 PF09285 Elongation factor P, C-terminal F3113_RS22570 PF08207 Elongation factor P (EF-P) KOW-like domain F3113_RS22575 PF04055 Radical SAM superfamily F3113_RS22580 PF15922 YjeJ-like F3113_RS22585 PF13698 Domain of unknown function (DUF4156) F3113_RS22590 PF00118 TCP-1/cpn60 chaperonin family F3113_RS22595 PF00166 Chaperonin 10 Kd subunit F3113_RS22600 PF13520 Amino acid permease F3113_RS22605 PF04186 FxsA cytoplasmic membrane protein F3113_RS22610 PF10415 Fumarase C C-terminus F3113_RS22610 PF00206 Lyase F3113_RS22615 PF03605 Anaerobic c4-dicarboxylate membrane transporter F3113_RS22620 PF03091 CutA1 divalent ion tolerance protein F3113_RS22625 PF11412 Disulphide bond corrector protein DsbC F3113_RS22625 PF02683 Cytochrome C biogenesis protein transmembrane region F3113_RS22640 PF00501 AMP-binding enzyme F3113_RS22640 PF13193 AMP-binding enzyme C-terminal domain F3113_RS22670 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain F3113_RS22670 PF17203 Single cache domain 3 F3113_RS22670 PF00989 PAS fold F3113_RS22670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS22675 PF00072 Response regulator receiver domain F3113_RS22680 PF03605 Anaerobic c4-dicarboxylate membrane transporter F3113_RS22685 PF05683 Fumarase C-terminus F3113_RS22685 PF05681 Fumarate hydratase (Fumerase) F3113_RS22690 PF09997 Predicted membrane protein (DUF2238) F3113_RS22695 PF04193 PQ loop repeat F3113_RS22705 PF11975 Family 4 glycosyl hydrolase C-terminal domain F3113_RS22705 PF02056 Family 4 glycosyl hydrolase F3113_RS22710 PF12833 Helix-turn-helix domain F3113_RS22715 PF01276 Orn/Lys/Arg decarboxylase, major domain F3113_RS22715 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain F3113_RS22715 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain F3113_RS22720 PF12833 Helix-turn-helix domain F3113_RS22725 PF13520 Amino acid permease F3113_RS22730 PF08019 Phosphoethanolamine transferase EptA/EptB F3113_RS22730 PF00884 Sulfatase F3113_RS22735 PF00486 Transcriptional regulatory protein, C terminal F3113_RS22735 PF00072 Response regulator receiver domain F3113_RS22740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS22740 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS22750 PF00083 Sugar (and other) transporter F3113_RS22750 PF08946 Osmosensory transporter coiled coil F3113_RS22755 PF03812 2-keto-3-deoxygluconate permease F3113_RS22760 PF13990 YjcZ-like protein F3113_RS22765 PF00350 Dynamin family F3113_RS22770 PF08274 PhnA Zinc-Ribbon F3113_RS22770 PF03831 PhnA domain F3113_RS22775 PF06983 3-demethylubiquinone-9 3-methyltransferase F3113_RS22780 PF00005 ABC transporter F3113_RS22790 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS22795 PF07702 UTRA domain F3113_RS22795 PF00392 Bacterial regulatory proteins, gntR family F3113_RS22800 PF06754 Phosphonate metabolism protein PhnG F3113_RS22805 PF05845 Bacterial phosphonate metabolism protein (PhnH) F3113_RS22810 PF05861 Bacterial phosphonate metabolism protein (PhnI) F3113_RS22815 PF06007 Phosphonate metabolism protein PhnJ F3113_RS22820 PF00005 ABC transporter F3113_RS22825 PF00005 ABC transporter F3113_RS22830 PF07969 Amidohydrolase family F3113_RS22840 PF00583 Acetyltransferase (GNAT) family F3113_RS22845 PF12706 Beta-lactamase superfamily domain F3113_RS22855 PF00072 Response regulator receiver domain F3113_RS22855 PF08448 PAS fold F3113_RS22855 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS22855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS22855 PF13188 PAS domain F3113_RS22860 PF00005 ABC transporter F3113_RS22865 PF02653 Branched-chain amino acid transport system / permease component F3113_RS22870 PF13407 Periplasmic binding protein domain F3113_RS22880 PF01116 Fructose-bisphosphate aldolase class-II F3113_RS22890 PF00072 Response regulator receiver domain F3113_RS22890 PF00486 Transcriptional regulatory protein, C terminal F3113_RS22895 PF00753 Metallo-beta-lactamase superfamily F3113_RS22895 PF14863 Alkyl sulfatase dimerisation F3113_RS22895 PF14864 Alkyl sulfatase C-terminal F3113_RS22900 PF17090 Uncharacterised protein family F3113_RS22905 PF00529 HlyD membrane-fusion protein of T1SS F3113_RS22905 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion F3113_RS22910 PF04632 Fusaric acid resistance protein family F3113_RS22915 PF02321 Outer membrane efflux protein F3113_RS22925 PF08238 Sel1 repeat F3113_RS22930 PF00375 Sodium:dicarboxylate symporter family F3113_RS22940 PF03918 Cytochrome C biogenesis protein F3113_RS22950 PF02371 Transposase IS116/IS110/IS902 family F3113_RS22950 PF01548 Transposase F3113_RS22960 PF03916 Polysulphide reductase, NrfD F3113_RS22965 PF00037 4Fe-4S binding domain F3113_RS22965 PF13247 4Fe-4S dicluster domain F3113_RS22970 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) F3113_RS22970 PF13435 Cytochrome c554 and c-prime F3113_RS22975 PF02335 Cytochrome c552 F3113_RS22980 PF13193 AMP-binding enzyme C-terminal domain F3113_RS22980 PF00501 AMP-binding enzyme F3113_RS22980 PF16177 Acetyl-coenzyme A synthetase N-terminus F3113_RS22985 PF04341 Protein of unknown function, DUF485 F3113_RS22990 PF00474 Sodium:solute symporter family F3113_RS22995 PF04172 LrgB-like family F3113_RS23000 PF03788 LrgA family F3113_RS23005 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS23005 PF03466 LysR substrate binding domain F3113_RS23015 PF00999 Sodium/hydrogen exchanger family F3113_RS23020 PF00860 Permease family F3113_RS23025 PF09278 MerR, DNA binding F3113_RS23025 PF00376 MerR family regulatory protein F3113_RS23030 PF12833 Helix-turn-helix domain F3113_RS23035 PF12792 CSS motif domain associated with EAL F3113_RS23035 PF00563 EAL domain F3113_RS23040 PF15940 Family of unknown function F3113_RS23045 PF00436 Single-strand binding protein family F3113_RS23050 PF17760 UvrA interaction domain F3113_RS23050 PF00005 ABC transporter F3113_RS23050 PF17755 UvrA DNA-binding domain F3113_RS23055 PF04237 YjbR F3113_RS23060 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) F3113_RS23065 PF00155 Aminotransferase class I and II F3113_RS23070 PF01168 Alanine racemase, N-terminal domain F3113_RS23070 PF00842 Alanine racemase, C-terminal domain F3113_RS23075 PF00772 DnaB-like helicase N terminal domain F3113_RS23075 PF03796 DnaB-like helicase C terminal domain F3113_RS23080 PF00107 Zinc-binding dehydrogenase F3113_RS23080 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS23085 PF09583 Phage shock protein G (Phageshock_PspG) F3113_RS23090 PF01207 Dihydrouridine synthase (Dus) F3113_RS23100 PF00717 Peptidase S24-like F3113_RS23105 PF06183 DinI-like family F3113_RS23155 PF06791 Prophage tail length tape measure protein F3113_RS23195 PF03864 Phage major capsid protein E F3113_RS23205 PF01972 Serine dehydrogenase proteinase F3113_RS23205 PF01957 NfeD-like C-terminal, partner-binding F3113_RS23215 PF02831 gpW F3113_RS23220 PF02413 Caudovirales tail fibre assembly protein, lambda gpK F3113_RS23225 PF07471 Phage DNA packaging protein Nu1 F3113_RS23240 PF10549 ORF11CD3 domain F3113_RS23240 PF09669 Phage regulatory protein Rha (Phage_pRha) F3113_RS23260 PF00182 Chitinase class I F3113_RS23285 PF06147 Protein of unknown function (DUF968) F3113_RS23310 PF05866 Endodeoxyribonuclease RusA F3113_RS23315 PF05869 DNA N-6-adenine-methyltransferase (Dam) F3113_RS23320 PF03354 Phage Terminase F3113_RS23340 PF00717 Peptidase S24-like F3113_RS23340 PF01381 Helix-turn-helix F3113_RS23345 PF00533 BRCA1 C Terminus (BRCT) domain F3113_RS23345 PF03120 NAD-dependent DNA ligase OB-fold domain F3113_RS23345 PF03119 NAD-dependent DNA ligase C4 zinc finger domain F3113_RS23345 PF12826 Helix-hairpin-helix motif F3113_RS23345 PF01653 NAD-dependent DNA ligase adenylation domain F3113_RS23430 PF01475 Ferric uptake regulator family F3113_RS23435 PF05532 CsbD-like F3113_RS23440 PF01554 MatE F3113_RS23445 PF01726 LexA DNA binding domain F3113_RS23445 PF00717 Peptidase S24-like F3113_RS23450 PF01219 Prokaryotic diacylglycerol kinase F3113_RS23455 PF01553 Acyltransferase F3113_RS23460 PF01040 UbiA prenyltransferase family F3113_RS23465 PF04345 Chorismate lyase F3113_RS23470 PF07148 Maltose operon periplasmic protein precursor (MalM) F3113_RS23475 PF02264 LamB porin F3113_RS23480 PF00005 ABC transporter F3113_RS23480 PF17912 MalK OB fold domain F3113_RS23485 PF01547 Bacterial extracellular solute-binding protein F3113_RS23490 PF14785 Maltose transport system permease protein MalF P2 domain F3113_RS23490 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS23495 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS23505 PF03553 Na+/H+ antiporter family F3113_RS23510 PF06146 Phosphate-starvation-inducible E F3113_RS23515 PF12804 MobA-like NTP transferase domain F3113_RS23515 PF14602 Hexapeptide repeat of succinyl-transferase F3113_RS23515 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS23520 PF06082 Exopolysaccharide biosynthesis protein YbjH F3113_RS23525 PF06251 Capsule biosynthesis GfcC F3113_RS23530 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF F3113_RS23535 PF11106 Exopolysaccharide production protein YjbE F3113_RS23540 PF00342 Phosphoglucose isomerase F3113_RS23545 PF00696 Amino acid kinase family F3113_RS23545 PF01842 ACT domain F3113_RS23550 PF10127 RNA repair pathway DNA polymerase beta family F3113_RS23560 PF06956 Regulator of RNA terminal phosphate cyclase F3113_RS23560 PF00158 Sigma-54 interaction domain F3113_RS23565 PF01758 Sodium Bile acid symporter family F3113_RS23585 PF00455 DeoR C terminal sensor domain F3113_RS23585 PF08220 DeoR-like helix-turn-helix domain F3113_RS23590 PF11656 YjbD family (DUF3811) F3113_RS23595 PF00849 RNA pseudouridylate synthase F3113_RS23595 PF01479 S4 domain F3113_RS23600 PF04198 Putative sugar-binding domain F3113_RS23600 PF13936 Helix-turn-helix domain F3113_RS23605 PF00106 short chain dehydrogenase F3113_RS23610 PF03610 PTS system fructose IIA component F3113_RS23615 PF03830 PTS system sorbose subfamily IIB component F3113_RS23620 PF03609 PTS system sorbose-specific iic component F3113_RS23625 PF03613 PTS system mannose/fructose/sorbose family IID component F3113_RS23630 PF00107 Zinc-binding dehydrogenase F3113_RS23630 PF08240 Alcohol dehydrogenase GroES-like domain F3113_RS23635 PF08501 Shikimate dehydrogenase substrate binding domain F3113_RS23650 PF01381 Helix-turn-helix F3113_RS23665 PF03575 Peptidase family S51 F3113_RS23670 PF02690 Na+/Pi-cotransporter F3113_RS23675 PF02310 B12 binding domain F3113_RS23675 PF02607 B12 binding domain F3113_RS23675 PF02965 Vitamin B12 dependent methionine synthase, activation domain F3113_RS23675 PF00809 Pterin binding enzyme F3113_RS23675 PF02574 Homocysteine S-methyltransferase F3113_RS23680 PF09339 IclR helix-turn-helix domain F3113_RS23680 PF01614 Bacterial transcriptional regulator F3113_RS23685 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) F3113_RS23690 PF00463 Isocitrate lyase family F3113_RS23695 PF01274 Malate synthase F3113_RS23700 PF04204 Homoserine O-succinyltransferase F3113_RS23705 PF13673 Acetyltransferase (GNAT) domain F3113_RS23725 PF02142 MGS-like domain F3113_RS23725 PF01808 AICARFT/IMPCHase bienzyme F3113_RS23730 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain F3113_RS23730 PF02844 Phosphoribosylglycinamide synthetase, N domain F3113_RS23730 PF02843 Phosphoribosylglycinamide synthetase, C domain F3113_RS23735 PF00072 Response regulator receiver domain F3113_RS23735 PF00158 Sigma-54 interaction domain F3113_RS23735 PF02954 Bacterial regulatory protein, Fis family F3113_RS23740 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS23740 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS23750 PF13801 Heavy-metal resistance F3113_RS23755 PF07356 Protein of unknown function (DUF1481) F3113_RS23760 PF00216 Bacterial DNA-binding protein F3113_RS23765 PF04222 Protein of unknown function (DUF416) F3113_RS23770 PF04493 Endonuclease V F3113_RS23775 PF01208 Uroporphyrinogen decarboxylase (URO-D) F3113_RS23780 PF09297 NADH pyrophosphatase zinc ribbon domain F3113_RS23780 PF00293 NUDIX domain F3113_RS23785 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ F3113_RS23790 PF13667 ThiC-associated domain F3113_RS23790 PF01964 Radical SAM ThiC family F3113_RS23795 PF02581 Thiamine monophosphate synthase F3113_RS23800 PF00899 ThiF family F3113_RS23805 PF02597 ThiS family F3113_RS23810 PF05690 Thiazole biosynthesis protein ThiG F3113_RS23815 PF06968 Biotin and Thiamin Synthesis associated domain F3113_RS23815 PF04055 Radical SAM superfamily F3113_RS23820 PF00313 'Cold-shock' DNA-binding domain F3113_RS23825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS23830 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit F3113_RS23835 PF05000 RNA polymerase Rpb1, domain 4 F3113_RS23835 PF00623 RNA polymerase Rpb1, domain 2 F3113_RS23835 PF04997 RNA polymerase Rpb1, domain 1 F3113_RS23835 PF04983 RNA polymerase Rpb1, domain 3 F3113_RS23835 PF04998 RNA polymerase Rpb1, domain 5 F3113_RS23840 PF04560 RNA polymerase Rpb2, domain 7 F3113_RS23840 PF04563 RNA polymerase beta subunit F3113_RS23840 PF10385 RNA polymerase beta subunit external 1 domain F3113_RS23840 PF04565 RNA polymerase Rpb2, domain 3 F3113_RS23840 PF04561 RNA polymerase Rpb2, domain 2 F3113_RS23840 PF00562 RNA polymerase Rpb2, domain 6 F3113_RS23845 PF00542 Ribosomal protein L7/L12 C-terminal domain F3113_RS23845 PF16320 Ribosomal protein L7/L12 dimerisation domain F3113_RS23850 PF00466 Ribosomal protein L10 F3113_RS23855 PF00687 Ribosomal protein L1p/L10e family F3113_RS23860 PF00298 Ribosomal protein L11, RNA binding domain F3113_RS23860 PF03946 Ribosomal protein L11, N-terminal domain F3113_RS23865 PF00467 KOW motif F3113_RS23865 PF02357 Transcription termination factor nusG F3113_RS23870 PF00584 SecE/Sec61-gamma subunits of protein translocation complex F3113_RS23875 PF03144 Elongation factor Tu domain 2 F3113_RS23875 PF00009 Elongation factor Tu GTP binding domain F3113_RS23875 PF03143 Elongation factor Tu C-terminal domain F3113_RS23900 PF00485 Phosphoribulokinase / Uridine kinase family F3113_RS23905 PF08279 HTH domain F3113_RS23905 PF02237 Biotin protein ligase C terminal domain F3113_RS23905 PF03099 Biotin/lipoate A/B protein ligase family F3113_RS23910 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain F3113_RS23910 PF01565 FAD binding domain F3113_RS23940 PF01177 Asp/Glu/Hydantoin racemase F3113_RS23945 PF00593 TonB dependent receptor F3113_RS23945 PF07715 TonB-dependent Receptor Plug Domain F3113_RS23950 PF05958 tRNA (Uracil-5-)-methyltransferase F3113_RS23955 PF07226 Protein of unknown function (DUF1422) F3113_RS23960 PF00440 Bacterial regulatory proteins, tetR family F3113_RS23965 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS23965 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3113_RS23970 PF03466 LysR substrate binding domain F3113_RS23970 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS23975 PF14698 Argininosuccinate lyase C-terminal F3113_RS23975 PF00206 Lyase F3113_RS23980 PF00696 Amino acid kinase family F3113_RS23985 PF02774 Semialdehyde dehydrogenase, dimerisation domain F3113_RS23985 PF01118 Semialdehyde dehydrogenase, NAD binding domain F3113_RS23990 PF07687 Peptidase dimerisation domain F3113_RS23990 PF01546 Peptidase family M20/M25/M40 F3113_RS23995 PF00311 Phosphoenolpyruvate carboxylase F3113_RS24000 PF00884 Sulfatase F3113_RS24005 PF12833 Helix-turn-helix domain F3113_RS24010 PF00923 Transaldolase/Fructose-6-phosphate aldolase F3113_RS24015 PF00465 Iron-containing alcohol dehydrogenase F3113_RS24020 PF00141 Peroxidase F3113_RS24025 PF02219 Methylenetetrahydrofolate reductase F3113_RS24030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS24030 PF03466 LysR substrate binding domain F3113_RS24035 PF02627 Carboxymuconolactone decarboxylase family F3113_RS24040 PF02872 5'-nucleotidase, C-terminal domain F3113_RS24040 PF00149 Calcineurin-like phosphoesterase F3113_RS24050 PF00696 Amino acid kinase family F3113_RS24050 PF00742 Homoserine dehydrogenase F3113_RS24050 PF03447 Homoserine dehydrogenase, NAD binding domain F3113_RS24055 PF01053 Cys/Met metabolism PLP-dependent enzyme F3113_RS24060 PF01340 Met Apo-repressor, MetJ F3113_RS24070 PF06178 Oligogalacturonate-specific porin protein (KdgM) F3113_RS24075 PF01197 Ribosomal protein L31 F3113_RS24080 PF00270 DEAD/DEAH box helicase F3113_RS24080 PF00271 Helicase conserved C-terminal domain F3113_RS24080 PF17764 3′ DNA-binding domain (3′BD) F3113_RS24080 PF18074 Primosomal protein N C-terminal domain F3113_RS24080 PF18319 PriA DNA helicase Cys-rich region (CRR) domain F3113_RS24085 PF00356 Bacterial regulatory proteins, lacI family F3113_RS24090 PF05036 Sporulation related domain F3113_RS24095 PF00227 Proteasome subunit F3113_RS24100 PF10431 C-terminal, D2-small domain, of ClpB protein F3113_RS24100 PF07724 AAA domain (Cdc48 subfamily) F3113_RS24100 PF00004 ATPase family associated with various cellular activities (AAA) F3113_RS24105 PF01040 UbiA prenyltransferase family F3113_RS24110 PF03737 Aldolase/RraA F3113_RS24120 PF06005 Cell division protein ZapB F3113_RS24125 PF00230 Major intrinsic protein F3113_RS24130 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS24130 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS24135 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded F3113_RS24140 PF00970 Oxidoreductase FAD-binding domain F3113_RS24140 PF00175 Oxidoreductase NAD-binding domain F3113_RS24145 PF05656 Protein of unknown function (DUF805) F3113_RS24150 PF07305 Protein of unknown function (DUF1454) F3113_RS24155 PF00121 Triosephosphate isomerase F3113_RS24160 PF00939 Sodium:sulfate symporter transmembrane region F3113_RS24170 PF02611 CDP-diacylglycerol pyrophosphatase F3113_RS24180 PF00365 Phosphofructokinase F3113_RS24185 PF01545 Cation efflux family F3113_RS24185 PF16916 Dimerisation domain of Zinc Transporter F3113_RS24190 PF07813 LTXXQ motif family protein F3113_RS24195 PF00486 Transcriptional regulatory protein, C terminal F3113_RS24195 PF00072 Response regulator receiver domain F3113_RS24200 PF16527 Two-component sensor protein CpxA, periplasmic domain F3113_RS24200 PF00672 HAMP domain F3113_RS24200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS24200 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS24205 PF03473 MOSC domain F3113_RS24205 PF03475 3-alpha domain F3113_RS24210 PF00701 Dihydrodipicolinate synthetase family F3113_RS24215 PF03812 2-keto-3-deoxygluconate permease F3113_RS24220 PF02777 Iron/manganese superoxide dismutases, C-terminal domain F3113_RS24220 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain F3113_RS24225 PF06379 L-rhamnose-proton symport protein (RhaT) F3113_RS24230 PF02311 AraC-like ligand binding domain F3113_RS24230 PF12833 Helix-turn-helix domain F3113_RS24235 PF02311 AraC-like ligand binding domain F3113_RS24235 PF12833 Helix-turn-helix domain F3113_RS24240 PF00370 FGGY family of carbohydrate kinases, N-terminal domain F3113_RS24240 PF02782 FGGY family of carbohydrate kinases, C-terminal domain F3113_RS24245 PF06134 L-rhamnose isomerase (RhaA) F3113_RS24250 PF00596 Class II Aldolase and Adducin N-terminal domain F3113_RS24255 PF00465 Iron-containing alcohol dehydrogenase F3113_RS24260 PF05336 L-rhamnose mutarotase F3113_RS24270 PF03591 AzlC protein F3113_RS24280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS24285 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit F3113_RS24285 PF02378 Phosphotransferase system, EIIC F3113_RS24290 PF05343 M42 glutamyl aminopeptidase F3113_RS24295 PF08279 HTH domain F3113_RS24295 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 F3113_RS24315 PF02634 FdhD/NarQ family F3113_RS24325 PF13247 4Fe-4S dicluster domain F3113_RS24325 PF09163 Formate dehydrogenase N, transmembrane F3113_RS24330 PF01292 Prokaryotic cytochrome b561 F3113_RS24335 PF04216 Protein involved in formate dehydrogenase formation F3113_RS24350 PF07859 alpha/beta hydrolase fold F3113_RS24355 PF09500 Putative thioesterase (yiiD_Cterm) F3113_RS24355 PF00583 Acetyltransferase (GNAT) family F3113_RS24360 PF02580 D-Tyr-tRNA(Tyr) deacylase F3113_RS24365 PF03631 Virulence factor BrkB F3113_RS24370 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS24375 PF00455 DeoR C terminal sensor domain F3113_RS24375 PF08220 DeoR-like helix-turn-helix domain F3113_RS24380 PF00294 pfkB family carbohydrate kinase F3113_RS24385 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3113_RS24385 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3113_RS24390 PF01791 DeoC/LacD family aldolase F3113_RS24400 PF01263 Aldose 1-epimerase F3113_RS24405 PF01055 Glycosyl hydrolases family 31 F3113_RS24420 PF06178 Oligogalacturonate-specific porin protein (KdgM) F3113_RS24425 PF03144 Elongation factor Tu domain 2 F3113_RS24425 PF00679 Elongation factor G C-terminus F3113_RS24425 PF00009 Elongation factor Tu GTP binding domain F3113_RS24430 PF00120 Glutamine synthetase, catalytic domain F3113_RS24430 PF03951 Glutamine synthetase, beta-Grasp domain F3113_RS24435 PF00989 PAS fold F3113_RS24435 PF00512 His Kinase A (phospho-acceptor) domain F3113_RS24435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase F3113_RS24440 PF02954 Bacterial regulatory protein, Fis family F3113_RS24440 PF00072 Response regulator receiver domain F3113_RS24440 PF00158 Sigma-54 interaction domain F3113_RS24450 PF06969 HemN C-terminal domain F3113_RS24450 PF04055 Radical SAM superfamily F3113_RS24455 PF04220 Der GTPase activator (YihI) F3113_RS24460 PF01926 50S ribosome-binding GTPase F3113_RS24465 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain F3113_RS24465 PF01367 5'-3' exonuclease, C-terminal SAM fold F3113_RS24465 PF00476 DNA polymerase family A F3113_RS24465 PF01612 3'-5' exonuclease F3113_RS24470 PF01553 Acyltransferase F3113_RS24475 PF01323 DSBA-like thioredoxin domain F3113_RS24480 PF01636 Phosphotransferase enzyme family F3113_RS24485 PF06288 Protein of unknown function (DUF1040) F3113_RS24490 PF12804 MobA-like NTP transferase domain F3113_RS24495 PF03205 Molybdopterin guanine dinucleotide synthesis protein B F3113_RS24525 PF12724 Flavodoxin domain F3113_RS24530 PF02386 Cation transport protein F3113_RS24535 PF01205 Uncharacterized protein family UPF0029 F3113_RS24535 PF09186 Domain of unknown function (DUF1949) F3113_RS24540 PF00557 Metallopeptidase family M24 F3113_RS24545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain F3113_RS24545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain F3113_RS24545 PF00378 Enoyl-CoA hydratase/isomerase F3113_RS24550 PF00108 Thiolase, N-terminal domain F3113_RS24550 PF02803 Thiolase, C-terminal domain F3113_RS24555 PF00356 Bacterial regulatory proteins, lacI family F3113_RS24560 PF00480 ROK family F3113_RS24565 PF00970 Oxidoreductase FAD-binding domain F3113_RS24565 PF00175 Oxidoreductase NAD-binding domain F3113_RS24570 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase F3113_RS24575 PF02357 Transcription termination factor nusG F3113_RS24580 PF01026 TatD related DNase F3113_RS24585 PF00902 Sec-independent protein translocase protein (TatC) F3113_RS24595 PF02416 mttA/Hcf106 family F3113_RS24600 PF03109 ABC1 family F3113_RS24605 PF02036 SCP-2 sterol transfer family F3113_RS24610 PF01209 ubiE/COQ5 methyltransferase family F3113_RS24615 PF02646 RmuC family F3113_RS24620 PF01048 Phosphorylase superfamily F3113_RS24625 PF01738 Dienelactone hydrolase family F3113_RS24630 PF01717 Cobalamin-independent synthase, Catalytic domain F3113_RS24630 PF08267 Cobalamin-independent synthase, N-terminal domain F3113_RS24635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS24635 PF03466 LysR substrate binding domain F3113_RS24640 PF00892 EamA-like transporter family F3113_RS24650 PF12146 Serine aminopeptidase, S33 F3113_RS24655 PF01810 LysE type translocator F3113_RS24660 PF04754 Putative transposase, YhgA-like F3113_RS24665 PF01810 LysE type translocator F3113_RS24670 PF09382 RQC domain F3113_RS24670 PF16124 RecQ zinc-binding F3113_RS24670 PF00270 DEAD/DEAH box helicase F3113_RS24670 PF00570 HRDC domain F3113_RS24670 PF00271 Helicase conserved C-terminal domain F3113_RS24675 PF02253 Phospholipase A1 F3113_RS24680 PF03061 Thioesterase superfamily F3113_RS24685 PF00892 EamA-like transporter family F3113_RS24690 PF01544 CorA-like Mg2+ transporter protein F3113_RS24695 PF13361 UvrD-like helicase C-terminal domain F3113_RS24695 PF00580 UvrD/REP helicase N-terminal domain F3113_RS24700 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS24705 PF00589 Phage integrase family F3113_RS24705 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS24710 PF04340 Protein of unknown function, DUF484 F3113_RS24715 PF01678 Diaminopimelate epimerase F3113_RS24720 PF13627 Prokaryotic lipoprotein-attachment site F3113_RS24725 PF01491 Frataxin-like domain F3113_RS24730 PF01295 Adenylate cyclase, class-I F3113_RS24730 PF12633 Adenylate cyclase NT domain F3113_RS24735 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain F3113_RS24735 PF03900 Porphobilinogen deaminase, C-terminal domain F3113_RS24740 PF02602 Uroporphyrinogen-III synthase HemD F3113_RS24745 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase F3113_RS24750 PF07219 HemY protein N-terminus F3113_RS24750 PF07719 Tetratricopeptide repeat F3113_RS24775 PF00324 Amino acid permease F3113_RS24780 PF03808 Glycosyl transferase WecB/TagA/CpsF family F3113_RS24785 PF06899 WzyE protein, O-antigen assembly polymerase F3113_RS24790 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 F3113_RS24795 PF01943 Polysaccharide biosynthesis protein F3113_RS24800 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family F3113_RS24810 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain F3113_RS24810 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain F3113_RS24810 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain F3113_RS24815 PF02350 UDP-N-acetylglucosamine 2-epimerase F3113_RS24820 PF02706 Chain length determinant protein F3113_RS24825 PF00953 Glycosyl transferase family 4 F3113_RS24830 PF07497 Rho termination factor, RNA-binding domain F3113_RS24830 PF07498 Rho termination factor, N-terminal domain F3113_RS24830 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3113_RS24840 PF00085 Thioredoxin F3113_RS24845 PF00270 DEAD/DEAH box helicase F3113_RS24845 PF00271 Helicase conserved C-terminal domain F3113_RS24850 PF02541 Ppx/GppA phosphatase family F3113_RS24855 PF13361 UvrD-like helicase C-terminal domain F3113_RS24855 PF00580 UvrD/REP helicase N-terminal domain F3113_RS24865 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain F3113_RS24865 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain F3113_RS24870 PF03466 LysR substrate binding domain F3113_RS24870 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS24875 PF07055 Enoyl reductase FAD binding domain F3113_RS24875 PF12242 NAD(P)H binding domain of trans-2-enoyl-CoA reductase F3113_RS24875 PF12241 Trans-2-enoyl-CoA reductase catalytic region F3113_RS24880 PF00291 Pyridoxal-phosphate dependent enzyme F3113_RS24880 PF00585 C-terminal regulatory domain of Threonine dehydratase F3113_RS24885 PF00920 Dehydratase family F3113_RS24890 PF01063 Amino-transferase class IV F3113_RS24900 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain F3113_RS24900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain F3113_RS24900 PF00205 Thiamine pyrophosphate enzyme, central domain F3113_RS24905 PF08046 IlvGEDA operon leader peptide F3113_RS24910 PF01078 Magnesium chelatase, subunit ChlI F3113_RS24910 PF13335 Magnesium chelatase, subunit ChlI C-terminal F3113_RS24915 PF04219 Protein of unknown function, DUF F3113_RS24920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS24920 PF03466 LysR substrate binding domain F3113_RS24955 PF00392 Bacterial regulatory proteins, gntR family F3113_RS24955 PF07729 FCD domain F3113_RS24960 PF07690 Major Facilitator Superfamily F3113_RS24965 PF00356 Bacterial regulatory proteins, lacI family F3113_RS24970 PF00294 pfkB family carbohydrate kinase F3113_RS24975 PF13407 Periplasmic binding protein domain F3113_RS24980 PF02653 Branched-chain amino acid transport system / permease component F3113_RS24985 PF00005 ABC transporter F3113_RS24990 PF05025 RbsD / FucU transport protein family F3113_RS24995 PF02705 K+ potassium transporter F3113_RS25000 PF17868 AAA lid domain F3113_RS25000 PF07728 AAA domain (dynein-related subfamily) F3113_RS25000 PF12592 Protein of unknown function (DUF3763) F3113_RS25005 PF05762 VWA domain containing CoxE-like protein F3113_RS25010 PF03590 Aspartate-ammonia ligase F3113_RS25015 PF01037 Lrp/AsnC ligand binding domain F3113_RS25020 PF00258 Flavodoxin F3113_RS25025 PF13932 GidA associated domain F3113_RS25025 PF01134 Glucose inhibited division protein A F3113_RS25030 PF02527 rRNA small subunit methyltransferase G F3113_RS25035 PF03899 ATP synthase I chain F3113_RS25040 PF00119 ATP synthase A chain F3113_RS25045 PF00137 ATP synthase subunit C F3113_RS25050 PF00430 ATP synthase B/B' CF(0) F3113_RS25055 PF00213 ATP synthase delta (OSCP) subunit F3113_RS25060 PF00306 ATP synthase alpha/beta chain, C terminal domain F3113_RS25060 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3113_RS25060 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3113_RS25065 PF00231 ATP synthase F3113_RS25070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain F3113_RS25070 PF02874 ATP synthase alpha/beta family, beta-barrel domain F3113_RS25075 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain F3113_RS25075 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain F3113_RS25080 PF14602 Hexapeptide repeat of succinyl-transferase F3113_RS25080 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS25080 PF12804 MobA-like NTP transferase domain F3113_RS25085 PF01380 SIS domain F3113_RS25090 PF08721 TnsA endonuclease C terminal F3113_RS25090 PF08722 TnsA endonuclease N terminal F3113_RS25095 PF00665 Integrase core domain F3113_RS25100 PF11426 Tn7 transposition regulator TnsC F3113_RS25100 PF13401 AAA domain F3113_RS25115 PF18623 TnsE C-terminal domain F3113_RS25140 PF01909 Nucleotidyltransferase domain F3113_RS25140 PF13427 Domain of unknown function (DUF4111) F3113_RS25145 PF00583 Acetyltransferase (GNAT) family F3113_RS25150 PF00186 Dihydrofolate reductase F3113_RS25155 PF13495 Phage integrase, N-terminal SAM-like domain F3113_RS25155 PF00589 Phage integrase family F3113_RS25160 PF13495 Phage integrase, N-terminal SAM-like domain F3113_RS25160 PF00589 Phage integrase family F3113_RS25170 PF12849 PBP superfamily domain F3113_RS25175 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS25180 PF00528 Binding-protein-dependent transport system inner membrane component F3113_RS25185 PF00005 ABC transporter F3113_RS25190 PF01895 PhoU domain F3113_RS25195 PF13419 Haloacid dehalogenase-like hydrolase F3113_RS25200 PF00860 Permease family F3113_RS25205 PF03358 NADPH-dependent FMN reductase F3113_RS25215 PF03466 LysR substrate binding domain F3113_RS25215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family F3113_RS25220 PF07690 Major Facilitator Superfamily F3113_RS25225 PF12631 MnmE helical domain F3113_RS25225 PF01926 50S ribosome-binding GTPase F3113_RS25225 PF10396 GTP-binding protein TrmE N-terminus F3113_RS25230 PF14849 YidC periplasmic domain F3113_RS25230 PF02096 60Kd inner membrane protein F3113_RS25235 PF01809 Putative membrane protein insertion efficiency factor F3113_RS25240 PF00825 Ribonuclease P F3113_RS25245 PF00468 Ribosomal protein L34 F3113_RS25255 PF02387 IncFII RepA protein family F3113_RS25305 PF02796 Helix-turn-helix domain of resolvase F3113_RS25305 PF00239 Resolvase, N terminal domain F3113_RS25320 PF04754 Putative transposase, YhgA-like F3113_RS25325 PF00455 DeoR C terminal sensor domain F3113_RS25325 PF08220 DeoR-like helix-turn-helix domain F3113_RS25330 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase F3113_RS25330 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase F3113_RS25340 PF13610 DDE domain F3113_RS25350 PF00239 Resolvase, N terminal domain F3113_RS25350 PF02796 Helix-turn-helix domain of resolvase F3113_RS25375 PF00809 Pterin binding enzyme F3113_RS25385 PF13614 AAA domain F3113_RS25390 PF08535 KorB domain F3113_RS25390 PF06613 KorB C-terminal beta-barrel domain F3113_RS25390 PF02195 ParB-like nuclease domain F3113_RS25440 PF00145 C-5 cytosine-specific DNA methylase F3113_RS25465 PF01131 DNA topoisomerase F3113_RS25465 PF01751 Toprim domain F3113_RS25560 PF00144 Beta-lactamase F3113_RS25565 PF08212 Lipocalin-like domain F3113_RS25570 PF00893 Small Multidrug Resistance protein F3113_RS25580 PF10411 Disulfide bond isomerase protein N-terminus F3113_RS25580 PF13098 Thioredoxin-like domain F3113_RS25605 PF13610 DDE domain F3113_RS25615 PF00563 EAL domain F3113_RS25615 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS25615 PF03707 Bacterial signalling protein N terminal repeat F3113_RS25620 PF05052 MerE protein F3113_RS25625 PF13411 MerR HTH family regulatory protein F3113_RS25630 PF03243 Alkylmercury lyase F3113_RS25630 PF12324 Helix-turn-helix domain of alkylmercury lyase F3113_RS25635 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3113_RS25635 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS25635 PF00403 Heavy-metal-associated domain F3113_RS25640 PF00403 Heavy-metal-associated domain F3113_RS25645 PF02411 MerT mercuric transport protein F3113_RS25650 PF09278 MerR, DNA binding F3113_RS25650 PF00376 MerR family regulatory protein F3113_RS25655 PF02371 Transposase IS116/IS110/IS902 family F3113_RS25655 PF01548 Transposase F3113_RS25710 PF00589 Phage integrase family F3113_RS25710 PF02899 Phage integrase, N-terminal SAM-like domain F3113_RS25745 PF06122 Conjugative relaxosome accessory transposon protein F3113_RS25850 PF01343 Peptidase family S49 F3113_RS25890 PF00565 Staphylococcal nuclease homologue F3113_RS25895 PF00216 Bacterial DNA-binding protein F3113_RS25950 PF00905 Penicillin binding protein transpeptidase domain F3113_RS25960 PF13610 DDE domain F3113_RS25970 PF03707 Bacterial signalling protein N terminal repeat F3113_RS25970 PF00563 EAL domain F3113_RS25970 PF00990 Diguanylate cyclase, GGDEF domain F3113_RS25970 PF13188 PAS domain F3113_RS25975 PF05052 MerE protein F3113_RS25980 PF13411 MerR HTH family regulatory protein F3113_RS25985 PF07992 Pyridine nucleotide-disulphide oxidoreductase F3113_RS25985 PF00403 Heavy-metal-associated domain F3113_RS25985 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain F3113_RS25990 PF03203 MerC mercury resistance protein F3113_RS25995 PF00403 Heavy-metal-associated domain F3113_RS26000 PF02411 MerT mercuric transport protein F3113_RS26005 PF09278 MerR, DNA binding F3113_RS26005 PF00376 MerR family regulatory protein F3113_RS26010 PF02371 Transposase IS116/IS110/IS902 family F3113_RS26010 PF01548 Transposase F3113_RS26020 PF00809 Pterin binding enzyme F3113_RS26025 PF01636 Phosphotransferase enzyme family F3113_RS26030 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase F3113_RS26040 PF00440 Bacterial regulatory proteins, tetR family F3113_RS26040 PF02909 Tetracyclin repressor-like, C-terminal domain F3113_RS26045 PF07690 Major Facilitator Superfamily F3113_RS26080 PF13610 DDE domain F3113_RS26085 PF00302 Chloramphenicol acetyltransferase F3113_RS26095 PF13610 DDE domain F3113_RS26100 PF00239 Resolvase, N terminal domain F3113_RS26100 PF02796 Helix-turn-helix domain of resolvase F3113_RS26105 PF13700 Domain of unknown function (DUF4158) F3113_RS26105 PF01526 Tn3 transposase DDE domain F3113_RS26110 PF02371 Transposase IS116/IS110/IS902 family F3113_RS26110 PF01548 Transposase F3113_RS26145 PF02522 Aminoglycoside 3-N-acetyltransferase F3113_RS26150 PF13610 DDE domain F3113_RS26155 PF01636 Phosphotransferase enzyme family F3113_RS26170 PF13610 DDE domain F3113_RS26180 PF00809 Pterin binding enzyme F3113_RS26185 PF00893 Small Multidrug Resistance protein F3113_RS26195 PF00132 Bacterial transferase hexapeptide (six repeats) F3113_RS26210 PF13495 Phage integrase, N-terminal SAM-like domain F3113_RS26210 PF00589 Phage integrase family F3113_RS26215 PF13610 DDE domain F3113_RS26220 PF00392 Bacterial regulatory proteins, gntR family F3113_RS26220 PF07729 FCD domain F3113_RS26225 PF02614 Glucuronate isomerase F3113_RS26230 PF01232 Mannitol dehydrogenase Rossmann domain F3113_RS26230 PF08125 Mannitol dehydrogenase C-terminal domain F3113_RS26235 PF03786 D-mannonate dehydratase (UxuA) F3113_RS26240 PF03573 outer membrane porin, OprD family F3113_RS26250 PF00703 Glycosyl hydrolases family 2 F3113_RS26250 PF02837 Glycosyl hydrolases family 2, sugar binding domain F3113_RS26250 PF02836 Glycosyl hydrolases family 2, TIM barrel domain F3113_RS26255 PF00440 Bacterial regulatory proteins, tetR family F3113_RS26260 PF01609 Transposase DDE domain F3113_RS26260 PF05598 Transposase domain (DUF772) F3113_RS26275 PF02371 Transposase IS116/IS110/IS902 family F3113_RS26275 PF01548 Transposase F3113_RS26280 PF00440 Bacterial regulatory proteins, tetR family F3113_RS26285 PF13533 Biotin-lipoyl like F3113_RS26295 PF00005 ABC transporter F3113_RS26305 PF01548 Transposase F3113_RS26305 PF02371 Transposase IS116/IS110/IS902 family F3113_RS26310 PF04542 Sigma-70 region 2 F3113_RS26310 PF04545 Sigma-70, region 4 F3113_RS26330 PF00582 Universal stress protein family F3113_RS26335 PF00916 Sulfate permease family F3113_RS26335 PF01740 STAS domain F3113_RS26340 PF02371 Transposase IS116/IS110/IS902 family F3113_RS26340 PF01548 Transposase F3113_RS26350 PF00589 Phage integrase family F3113_RS26355 PF01051 Initiator Replication protein F3113_RS26370 PF05598 Transposase domain (DUF772) F3113_RS26370 PF01609 Transposase DDE domain F3113_RS26380 PF13936 Helix-turn-helix domain F3113_RS26380 PF00665 Integrase core domain F3113_RS26390 PF05717 IS66 Orf2 like protein F3113_RS26395 PF13817 IS66 C-terminal element F3113_RS26395 PF03050 Transposase IS66 family F3113_RS26395 PF13005 zinc-finger binding domain of transposase IS66 F3113_RS26395 PF13007 Transposase C of IS166 homeodomain F3113_RS26410 PF13614 AAA domain F3113_RS26415 PF18090 Centromere-binding protein HTH domain F3113_RS26415 PF02195 ParB-like nuclease domain F3113_RS26425 PF00005 ABC transporter F3113_RS26430 PF18284 DNA methylase N-terminal domain F3113_RS26430 PF00145 C-5 cytosine-specific DNA methylase F3113_RS26435 PF09217 Restriction endonuclease EcoRII, N-terminal F3113_RS26435 PF09019 EcoRII C terminal F3113_RS26455 PF00717 Peptidase S24-like F3113_RS26460 PF02586 SOS response associated peptidase (SRAP) F3113_RS26465 PF01555 DNA methylase F3113_RS26475 PF07128 Protein of unknown function (DUF1380) F3113_RS26495 PF06440 DNA polymerase III, theta subunit F3113_RS26510 PF00436 Single-strand binding protein family F3113_RS26515 PF06006 Bacterial protein of unknown function (DUF905) F3113_RS26525 PF06290 Plasmid SOS inhibition protein (PsiB) F3113_RS26530 PF06952 PsiA protein F3113_RS26565 PF03230 Antirestriction protein F3113_RS26570 PF01464 Transglycosylase SLT domain F3113_RS26575 PF05261 TraM protein, DNA-binding F3113_RS26585 PF05509 TraY domain F3113_RS26590 PF05513 TraA F3113_RS26595 PF07178 TraL protein F3113_RS26600 PF05309 TraE protein F3113_RS26610 PF03743 Bacterial conjugation TrbI-like protein F3113_RS26625 PF09676 Type IV conjugative transfer system lipoprotein (TraV) F3113_RS26630 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer F3113_RS26635 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) F3113_RS26640 PF12477 Sex factor F TraW protein N terminal F3113_RS26645 PF06834 TraU protein F3113_RS26655 PF09673 Type-F conjugative transfer system pilin assembly protein F3113_RS26660 PF06986 Type-1V conjugative transfer system mating pair stabilisation F3113_RS26670 PF13728 F plasmid transfer operon protein F3113_RS26675 PF06122 Conjugative relaxosome accessory transposon protein F3113_RS26680 PF07916 TraG-like protein, N-terminal region F3113_RS26690 PF05818 Enterobacterial TraT complement resistance protein F3113_RS26695 PF12615 F sex factor protein N terminal F3113_RS26695 PF10412 Type IV secretion-system coupling protein DNA-binding domain F3113_RS26700 PF08751 TrwC relaxase F3113_RS26700 PF18340 DNA relaxase TraI 2B/2B-like domain F3113_RS26700 PF07057 DNA helicase TraI F3113_RS26700 PF18272 single-stranded DNA binding TraI N-terminal subdomain F3113_RS26710 PF05857 TraX protein