C2U38_RS00005	SM00642	Alpha-amylase domain
C2U38_RS00015	SM00047	Lysozyme subfamily 2
C2U38_RS00020	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS00030	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00085	SM00357	Cold shock protein domain
C2U38_RS00120	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS00190	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00195	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00200	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00220	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS00220	SM00267	diguanylate cyclase
C2U38_RS00250	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS00280	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS00305	SM01235	C2U38_RS00305
C2U38_RS00340	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS00340	SM01134	C2U38_RS00340
C2U38_RS00410	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00490	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00525	SM00825	Beta-ketoacyl synthase
C2U38_RS00540	SM00825	Beta-ketoacyl synthase
C2U38_RS00595	SM00563	Phosphate acyltransferases
C2U38_RS00665	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00665	SM00962	SRP54-type protein, GTPase domain
C2U38_RS00665	SM00963	SRP54-type protein, helical bundle domain
C2U38_RS00670	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00710	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00715	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00740	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS00785	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS00810	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U38_RS00815	SM00642	Alpha-amylase domain
C2U38_RS00820	SM00642	Alpha-amylase domain
C2U38_RS00845	SM00450	Rhodanese Homology Domain
C2U38_RS00855	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS00855	SM01134	C2U38_RS00855
C2U38_RS00860	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS00910	SM00899	C2U38_RS00910
C2U38_RS00915	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS00915	SM00732	Likely ribonuclease with RNase H fold.
C2U38_RS00925	SM00448	cheY-homologous receiver domain
C2U38_RS00925	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS00930	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS00930	SM00387	Histidine kinase-like ATPases
C2U38_RS00930	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS00950	SM00363	S4 RNA-binding domain
C2U38_RS00995	SM00965	Secretin and TonB N terminus short domain
C2U38_RS01105	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U38_RS01105	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U38_RS01135	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS01205	SM00838	Elongation factor G C-terminus
C2U38_RS01205	SM00889	Elongation factor G, domain IV
C2U38_RS01275	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS01300	SM01403	C2U38_RS01300
C2U38_RS01320	SM01382	C2U38_RS01320
C2U38_RS01320	SM01383	C2U38_RS01320
C2U38_RS01335	SM00322	K homology RNA-binding domain
C2U38_RS01355	SM01374	C2U38_RS01355
C2U38_RS01360	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2U38_RS01425	SM00363	S4 RNA-binding domain
C2U38_RS01425	SM01390	C2U38_RS01425
C2U38_RS01430	SM00662	RNA polymerases D
C2U38_RS01445	SM00422	helix_turn_helix, mercury resistance
C2U38_RS01585	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS01740	SM00883	Chaperonin 10 Kd subunit
C2U38_RS01770	SM00841	Elongation factor P, C-terminal
C2U38_RS01770	SM01185	C2U38_RS01770
C2U38_RS01785	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS01865	SM00479	C2U38_RS01865
C2U38_RS01900	SM00646	C2U38_RS01900
C2U38_RS01905	SM00853	MutL C terminal dimerisation domain
C2U38_RS01905	SM01340	C2U38_RS01905
C2U38_RS01925	SM00244	prohibitin homologues
C2U38_RS01930	SM00244	prohibitin homologues
C2U38_RS01940	SM00788	Adenylosuccinate synthetase
C2U38_RS01955	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS01955	SM00357	Cold shock protein domain
C2U38_RS01955	SM00955	C2U38_RS01955
C2U38_RS01960	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2U38_RS01985	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS01985	SM01134	C2U38_RS01985
C2U38_RS02010	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2U38_RS02020	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U38_RS02080	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS02080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS02080	SM00319	Homologues of the ligand binding domain of Tar
C2U38_RS02090	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS02130	SM01091	Transporter associated domain
C2U38_RS02175	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS02190	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS02190	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS02355	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS02395	SM00642	Alpha-amylase domain
C2U38_RS02405	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS02415	SM00831	Cation transporter/ATPase, N-terminus
C2U38_RS02545	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS02570	SM00829	Enoylreductase
C2U38_RS02615	SM00487	DEAD-like helicases superfamily
C2U38_RS02615	SM00490	helicase superfamily c-terminal domain
C2U38_RS02640	SM00487	DEAD-like helicases superfamily
C2U38_RS02700	SM00869	Autotransporter beta-domain
C2U38_RS02785	SM00493	C2U38_RS02785
C2U38_RS02785	SM00778	Zinc-binding domain of primase-helicase
C2U38_RS02785	SM00885	D5 N terminal like
C2U38_RS02865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS02865	SM00895	C2U38_RS02865
C2U38_RS02920	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS02935	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS02945	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS03025	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U38_RS03040	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS03040	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS03040	SM00319	Homologues of the ligand binding domain of Tar
C2U38_RS03055	SM00895	C2U38_RS03055
C2U38_RS03060	SM00829	Enoylreductase
C2U38_RS03080	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS03100	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS03105	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS03125	SM00267	diguanylate cyclase
C2U38_RS03175	SM00749	bacterial OsmY and nodulation domain
C2U38_RS03205	SM01133	C2U38_RS03205
C2U38_RS03210	SM00941	Pyrimidine nucleoside phosphorylase C-terminal domain
C2U38_RS03245	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS03250	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS03255	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS03275	SM00855	Phosphoglycerate mutase family
C2U38_RS03280	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS03280	SM00871	Bacterial transcription activator, effector binding domain
C2U38_RS03290	SM00448	cheY-homologous receiver domain
C2U38_RS03290	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS03295	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS03295	SM00387	Histidine kinase-like ATPases
C2U38_RS03295	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS03305	SM00448	cheY-homologous receiver domain
C2U38_RS03305	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS03360	SM00852	Probable molybdopterin binding domain
C2U38_RS03380	SM00271	DnaJ molecular chaperone homology domain
C2U38_RS03395	SM00636	C2U38_RS03395
C2U38_RS03400	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS03410	SM00904	Riboflavin kinase
C2U38_RS03475	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS03485	SM01097	Carbamoyl-phosphate synthase small chain, CPSase domain
C2U38_RS03490	SM00851	MGS-like domain
C2U38_RS03490	SM01096	Carbamoyl-phosphate synthetase large chain, oligomerisation domain
C2U38_RS03535	SM00893	Electron transfer flavoprotein domain
C2U38_RS03540	SM00893	Electron transfer flavoprotein domain
C2U38_RS03595	SM00650	Ribosomal RNA adenine dimethylases
C2U38_RS03615	SM00271	DnaJ molecular chaperone homology domain
C2U38_RS03625	SM00487	DEAD-like helicases superfamily
C2U38_RS03625	SM00490	helicase superfamily c-terminal domain
C2U38_RS03630	SM00486	DNA polymerase type-B family
C2U38_RS03645	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U38_RS03660	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS03670	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS03710	SM01329	C2U38_RS03710
C2U38_RS03715	SM00917	LeuA allosteric (dimerisation) domain
C2U38_RS03740	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS03815	SM00842	Cell division protein FtsA
C2U38_RS03820	SM00864	Tubulin/FtsZ family, GTPase domain
C2U38_RS03820	SM00865	Tubulin/FtsZ family, C-terminal domain
C2U38_RS03835	SM00957	SecA DEAD-like domain
C2U38_RS03835	SM00958	SecA preprotein cross-linking domain
C2U38_RS03860	SM01240	C2U38_RS03860
C2U38_RS03885	SM00644	C2U38_RS03885
C2U38_RS03910	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS03910	SM00895	C2U38_RS03910
C2U38_RS03990	SM00564	beta-propeller repeat
C2U38_RS04000	SM00947	Carbonic anhydrase
C2U38_RS04005	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS04070	SM00487	DEAD-like helicases superfamily
C2U38_RS04070	SM00490	helicase superfamily c-terminal domain
C2U38_RS04070	SM00847	Helicase associated domain (HA2)  Add an annotation
C2U38_RS04085	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS04130	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U38_RS04140	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U38_RS04160	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U38_RS04205	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U38_RS04215	SM00935	Outer membrane protein (OmpH-like)
C2U38_RS04245	SM00481	DNA polymerase alpha chain like domain
C2U38_RS04265	SM00977	TilS substrate C-terminal domain
C2U38_RS04280	SM01322	C2U38_RS04280
C2U38_RS04325	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS04325	SM00930	C2U38_RS04325
C2U38_RS04390	SM00257	Lysin motif
C2U38_RS04395	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS04410	SM00479	C2U38_RS04410
C2U38_RS04425	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS04470	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS04550	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS04575	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS04630	SM00858	C2U38_RS04630
C2U38_RS04700	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS04785	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2U38_RS04795	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U38_RS04825	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS04835	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS04975	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS05005	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS05005	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS05040	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS05045	SM00640	Glycosyl hydrolases family 32
C2U38_RS05150	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS05160	SM01230	C2U38_RS05160
C2U38_RS05195	SM00912	haemagglutination activity domain
C2U38_RS05235	SM00346	helix_turn_helix isocitrate lyase regulation
C2U38_RS05260	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U38_RS05285	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05305	SM00387	Histidine kinase-like ATPases
C2U38_RS05310	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS05310	SM00448	cheY-homologous receiver domain
C2U38_RS05315	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS05320	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05335	SM01004	Delta-aminolevulinic acid dehydratase
C2U38_RS05345	SM00869	Autotransporter beta-domain
C2U38_RS05395	SM00098	Alkaline phosphatase homologues
C2U38_RS05405	SM00267	diguanylate cyclase
C2U38_RS05465	SM00448	cheY-homologous receiver domain
C2U38_RS05465	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS05470	SM00091	PAS domain
C2U38_RS05470	SM00387	Histidine kinase-like ATPases
C2U38_RS05470	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS05490	SM00642	Alpha-amylase domain
C2U38_RS05545	SM01323	C2U38_RS05545
C2U38_RS05615	SM00861	Transketolase, pyrimidine binding domain
C2U38_RS05630	SM00981	C2U38_RS05630
C2U38_RS05725	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05725	SM00994	ClpX C4-type zinc finger
C2U38_RS05725	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U38_RS05730	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05730	SM00464	Found in ATP-dependent protease La (LON)
C2U38_RS05735	SM00411	bacterial (prokaryotic) histone like domain
C2U38_RS05760	SM00778	Zinc-binding domain of primase-helicase
C2U38_RS05825	SM00344	helix_turn_helix ASNC type
C2U38_RS05830	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05835	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05845	SM00938	Nitrogen regulatory protein P-II
C2U38_RS05885	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS05900	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS05920	SM01266	C2U38_RS05920
C2U38_RS05980	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS05990	SM00493	C2U38_RS05990
C2U38_RS05995	SM00387	Histidine kinase-like ATPases
C2U38_RS06055	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06075	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS06090	SM00422	helix_turn_helix, mercury resistance
C2U38_RS06110	SM00244	prohibitin homologues
C2U38_RS06115	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06130	SM00822	C2U38_RS06130
C2U38_RS06140	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06160	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06160	SM00930	C2U38_RS06160
C2U38_RS06170	SM00450	Rhodanese Homology Domain
C2U38_RS06180	SM01001	AIR carboxylase
C2U38_RS06200	SM00840	C2U38_RS06200
C2U38_RS06260	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS06260	SM00448	cheY-homologous receiver domain
C2U38_RS06270	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS06320	SM00028	Tetratricopeptide repeats
C2U38_RS06335	SM00642	Alpha-amylase domain
C2U38_RS06355	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06435	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS06440	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS06455	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS06535	SM00506	Appr-1"-p processing enzyme
C2U38_RS06625	SM00487	DEAD-like helicases superfamily
C2U38_RS06690	SM00073	Histidine Phosphotransfer domain
C2U38_RS06690	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS06690	SM00387	Histidine kinase-like ATPases
C2U38_RS06690	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS06690	SM00448	cheY-homologous receiver domain
C2U38_RS06715	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS06760	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS06785	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS06790	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS06820	SM00861	Transketolase, pyrimidine binding domain
C2U38_RS06840	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06870	SM00923	MbtH-like protein
C2U38_RS06875	SM00824	Thioesterase
C2U38_RS06880	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS06920	SM00822	C2U38_RS06920
C2U38_RS06950	SM00470	ParB-like nuclease domain
C2U38_RS06995	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS07025	SM00903	Flavin reductase like domain
C2U38_RS07065	SM00764	Citrate lyase ligase C-terminal domain
C2U38_RS07070	SM00091	PAS domain
C2U38_RS07070	SM00387	Histidine kinase-like ATPases
C2U38_RS07075	SM00448	cheY-homologous receiver domain
C2U38_RS07095	SM00357	Cold shock protein domain
C2U38_RS07115	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS07130	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U38_RS07160	SM00855	Phosphoglycerate mutase family
C2U38_RS07225	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS07240	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS07250	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U38_RS07250	SM01091	Transporter associated domain
C2U38_RS07265	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS07365	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS07450	SM00448	cheY-homologous receiver domain
C2U38_RS07450	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS07455	SM00387	Histidine kinase-like ATPases
C2U38_RS07455	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS07505	SM00796	Allophanate hydrolase subunit 1
C2U38_RS07510	SM00797	Allophanate hydrolase subunit 2
C2U38_RS07535	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2U38_RS07535	SM01232	C2U38_RS07535
C2U38_RS07575	SM00861	Transketolase, pyrimidine binding domain
C2U38_RS07590	SM00881	CoA binding domain
C2U38_RS07620	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS07620	SM01134	C2U38_RS07620
C2U38_RS07625	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U38_RS07825	SM00855	Phosphoglycerate mutase family
C2U38_RS07855	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS07885	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS07985	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS07985	SM00866	C2U38_RS07985
C2U38_RS08025	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS08025	SM00876	Biotin and Thiamin Synthesis associated domain
C2U38_RS08045	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08055	SM00487	DEAD-like helicases superfamily
C2U38_RS08055	SM00490	helicase superfamily c-terminal domain
C2U38_RS08080	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS08085	SM00852	Probable molybdopterin binding domain
C2U38_RS08115	SM00155	Phospholipase D. Active site motifs.
C2U38_RS08140	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08155	SM00487	DEAD-like helicases superfamily
C2U38_RS08155	SM00490	helicase superfamily c-terminal domain
C2U38_RS08160	SM00487	DEAD-like helicases superfamily
C2U38_RS08160	SM00488	C2U38_RS08160
C2U38_RS08160	SM00491	C2U38_RS08160
C2U38_RS08185	SM00702	Prolyl 4-hydroxylase alpha subunit homologues.
C2U38_RS08210	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08220	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS08220	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U38_RS08250	SM00529	Helix-turn-helix diphteria tox regulatory element
C2U38_RS08265	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08300	SM00852	Probable molybdopterin binding domain
C2U38_RS08320	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08340	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS08360	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U38_RS08365	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS08365	SM01134	C2U38_RS08365
C2U38_RS08370	SM00014	Acid phosphatase homologues
C2U38_RS08445	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08495	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS08510	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08515	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08530	SM00344	helix_turn_helix ASNC type
C2U38_RS08535	SM00843	C2U38_RS08535
C2U38_RS08545	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08555	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS08585	SM00861	Transketolase, pyrimidine binding domain
C2U38_RS08655	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS08660	SM00411	bacterial (prokaryotic) histone like domain
C2U38_RS08665	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS08670	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08740	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS08770	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08785	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS08815	SM00981	C2U38_RS08815
C2U38_RS08820	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS08890	SM00851	MGS-like domain
C2U38_RS08900	SM00881	CoA binding domain
C2U38_RS08905	SM00992	Hemimethylated DNA-binding protein YccV like
C2U38_RS08910	SM00359	Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
C2U38_RS08930	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS08955	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS09000	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS09055	SM00271	DnaJ molecular chaperone homology domain
C2U38_RS09095	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS09185	SM00481	DNA polymerase alpha chain like domain
C2U38_RS09215	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS09240	SM00506	Appr-1"-p processing enzyme
C2U38_RS09245	SM00155	Phospholipase D. Active site motifs.
C2U38_RS09290	SM00450	Rhodanese Homology Domain
C2U38_RS09295	SM00867	YceI-like domain 
C2U38_RS09370	SM00858	C2U38_RS09370
C2U38_RS09415	SM00047	Lysozyme subfamily 2
C2U38_RS09430	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS09445	SM00363	S4 RNA-binding domain
C2U38_RS09475	SM00827	Acyl transferase domain in polyketide synthase (PKS) enzymes.
C2U38_RS09480	SM00822	C2U38_RS09480
C2U38_RS09490	SM00825	Beta-ketoacyl synthase
C2U38_RS09605	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS09700	SM00257	Lysin motif
C2U38_RS09705	SM00487	DEAD-like helicases superfamily
C2U38_RS09705	SM00490	helicase superfamily c-terminal domain
C2U38_RS09705	SM00982	C2U38_RS09705
C2U38_RS09705	SM01058	CarD-like/TRCF domain
C2U38_RS09720	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS09760	SM00357	Cold shock protein domain
C2U38_RS09780	SM00357	Cold shock protein domain
C2U38_RS09810	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS09845	SM00460	Transglutaminase/protease-like homologues
C2U38_RS09920	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS09975	SM00260	Two component signalling adaptor domain
C2U38_RS09985	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS09985	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS09985	SM00319	Homologues of the ligand binding domain of Tar
C2U38_RS09990	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS09990	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS09990	SM00319	Homologues of the ligand binding domain of Tar
C2U38_RS09995	SM00138	Methyltransferase, chemotaxis proteins 
C2U38_RS10000	SM00448	cheY-homologous receiver domain
C2U38_RS10005	SM00448	cheY-homologous receiver domain
C2U38_RS10015	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS10060	SM00836	DALR anticodon binding domain
C2U38_RS10060	SM01016	Arginyl tRNA synthetase N terminal dom
C2U38_RS10125	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U38_RS10130	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS10165	SM01329	C2U38_RS10165
C2U38_RS10175	SM00346	helix_turn_helix isocitrate lyase regulation
C2U38_RS10205	SM00357	Cold shock protein domain
C2U38_RS10250	SM01091	Transporter associated domain
C2U38_RS10255	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS10285	SM00487	DEAD-like helicases superfamily
C2U38_RS10285	SM00491	C2U38_RS10285
C2U38_RS10310	SM00341	Helicase and RNase D C-terminal
C2U38_RS10310	SM00474	3'-5' exonuclease
C2U38_RS10330	SM01329	C2U38_RS10330
C2U38_RS10385	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS10400	SM01005	Alanine racemase, C-terminal domain
C2U38_RS10405	SM01091	Transporter associated domain
C2U38_RS10445	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS10470	SM01120	C2U38_RS10470
C2U38_RS10480	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U38_RS10485	SM00972	Spore Coat Protein U domain
C2U38_RS10500	SM00972	Spore Coat Protein U domain
C2U38_RS10510	SM00422	helix_turn_helix, mercury resistance
C2U38_RS10515	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS10515	SM01034	Sensors of blue-light using FAD
C2U38_RS10540	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS10630	SM00387	Histidine kinase-like ATPases
C2U38_RS10630	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS10635	SM00448	cheY-homologous receiver domain
C2U38_RS10635	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS10660	SM00487	DEAD-like helicases superfamily
C2U38_RS10660	SM00490	helicase superfamily c-terminal domain
C2U38_RS10690	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS10780	SM00220	Serine/Threonine protein kinases, catalytic domain
C2U38_RS10825	SM01400	C2U38_RS10825
C2U38_RS10845	SM00937	C2U38_RS10845
C2U38_RS10900	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS10900	SM00448	cheY-homologous receiver domain
C2U38_RS10905	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS10905	SM00387	Histidine kinase-like ATPases
C2U38_RS10920	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS10970	SM00448	cheY-homologous receiver domain
C2U38_RS10980	SM00528	Domain in histone-like proteins of HNS family
C2U38_RS11025	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11030	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11045	SM00155	Phospholipase D. Active site motifs.
C2U38_RS11085	SM00267	diguanylate cyclase
C2U38_RS11115	SM00481	DNA polymerase alpha chain like domain
C2U38_RS11125	SM00363	S4 RNA-binding domain
C2U38_RS11135	SM00822	C2U38_RS11135
C2U38_RS11150	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U38_RS11150	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U38_RS11150	SM00493	C2U38_RS11150
C2U38_RS11175	SM00014	Acid phosphatase homologues
C2U38_RS11185	SM00028	Tetratricopeptide repeats
C2U38_RS11190	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2U38_RS11205	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS11205	SM01134	C2U38_RS11205
C2U38_RS11220	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS11220	SM00091	PAS domain
C2U38_RS11220	SM00267	diguanylate cyclase
C2U38_RS11225	SM00357	Cold shock protein domain
C2U38_RS11225	SM00955	C2U38_RS11225
C2U38_RS11255	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11260	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11285	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11310	SM00642	Alpha-amylase domain
C2U38_RS11355	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11365	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS11370	SM00450	Rhodanese Homology Domain
C2U38_RS11385	SM00091	PAS domain
C2U38_RS11385	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11405	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS11420	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS11420	SM01134	C2U38_RS11420
C2U38_RS11455	SM00100	Cyclic nucleotide-monophosphate binding domain
C2U38_RS11455	SM00419	helix_turn_helix, cAMP Regulatory protein
C2U38_RS11465	SM00463	Small MutS-related domain
C2U38_RS11470	SM00091	PAS domain
C2U38_RS11470	SM00267	diguanylate cyclase
C2U38_RS11475	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS11475	SM00267	diguanylate cyclase
C2U38_RS11480	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS11495	SM00487	DEAD-like helicases superfamily
C2U38_RS11495	SM00490	helicase superfamily c-terminal domain
C2U38_RS11520	SM00890	Domain of unknown function
C2U38_RS11575	SM00563	Phosphate acyltransferases
C2U38_RS11585	SM00195	Dual specificity phosphatase, catalytic domain
C2U38_RS11585	SM00404	Protein tyrosine phosphatase, catalytic domain motif
C2U38_RS11605	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11605	SM00487	DEAD-like helicases superfamily
C2U38_RS11605	SM00490	helicase superfamily c-terminal domain
C2U38_RS11605	SM00847	Helicase associated domain (HA2)  Add an annotation
C2U38_RS11660	SM00829	Enoylreductase
C2U38_RS11670	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS11670	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS11670	SM00319	Homologues of the ligand binding domain of Tar
C2U38_RS11680	SM01131	C2U38_RS11680
C2U38_RS11685	SM01150	C2U38_RS11685
C2U38_RS11735	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS11745	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS11785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS11795	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11820	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS11875	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS11880	SM00829	Enoylreductase
C2U38_RS11905	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS11925	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS11940	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS11955	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS11960	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS11970	SM00903	Flavin reductase like domain
C2U38_RS12000	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS12035	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS12055	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS12060	SM00919	Malic enzyme, NAD binding domain
C2U38_RS12060	SM01274	C2U38_RS12060
C2U38_RS12095	SM00882	Coenzyme A transferase
C2U38_RS12100	SM00882	Coenzyme A transferase
C2U38_RS12110	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS12115	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS12150	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS12150	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS12240	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS12245	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS12280	SM00857	Resolvase, N terminal domain
C2U38_RS12305	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS12310	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS12350	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS12350	SM00895	C2U38_RS12350
C2U38_RS12375	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS12405	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS12455	SM00387	Histidine kinase-like ATPases
C2U38_RS12455	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS12460	SM00448	cheY-homologous receiver domain
C2U38_RS12460	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS12520	SM01002	Alanine dehydrogenase/PNT, C-terminal domain
C2U38_RS12520	SM01003	Alanine dehydrogenase/PNT, N-terminal domain
C2U38_RS12545	SM00448	cheY-homologous receiver domain
C2U38_RS12545	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS12560	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS12570	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS12570	SM00387	Histidine kinase-like ATPases
C2U38_RS12570	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS12600	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS12660	SM00900	C2U38_RS12660
C2U38_RS12670	SM00478	endonuclease III
C2U38_RS12670	SM00525	C2U38_RS12670
C2U38_RS12695	SM00363	S4 RNA-binding domain
C2U38_RS12720	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS12770	SM00479	C2U38_RS12770
C2U38_RS12805	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS12870	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS12870	SM00267	diguanylate cyclase
C2U38_RS12885	SM00267	diguanylate cyclase
C2U38_RS12885	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS12980	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS12985	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U38_RS13015	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS13060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS13060	SM00895	C2U38_RS13060
C2U38_RS13080	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS13080	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U38_RS13085	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13120	SM00790	Aldehyde ferredoxin oxidoreductase, N-terminal domain
C2U38_RS13135	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS13135	SM00448	cheY-homologous receiver domain
C2U38_RS13140	SM00387	Histidine kinase-like ATPases
C2U38_RS13140	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS13155	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS13170	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13170	SM00930	C2U38_RS13170
C2U38_RS13190	SM00257	Lysin motif
C2U38_RS13210	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13245	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS13300	SM00882	Coenzyme A transferase
C2U38_RS13310	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS13315	SM00893	Electron transfer flavoprotein domain
C2U38_RS13320	SM00893	Electron transfer flavoprotein domain
C2U38_RS13380	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13400	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13420	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS13440	SM00411	bacterial (prokaryotic) histone like domain
C2U38_RS13445	SM00873	B3/4 domain
C2U38_RS13445	SM00874	tRNA synthetase B5 domain
C2U38_RS13445	SM00896	Ferredoxin-fold anticodon binding domain
C2U38_RS13475	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U38_RS13530	SM01060	C2U38_RS13530
C2U38_RS13545	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS13580	SM00465	GIY-YIG type nucleases (URI domain)
C2U38_RS13655	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13660	SM00450	Rhodanese Homology Domain
C2U38_RS13685	SM00839	Glutamate/Leucine/Phenylalanine/Valine dehydrogenase
C2U38_RS13690	SM00436	Bacterial DNA topoisomeraes I ATP-binding domain
C2U38_RS13690	SM00437	Bacterial DNA topoisomerase I DNA-binding domain
C2U38_RS13690	SM00493	C2U38_RS13690
C2U38_RS13710	SM00870	C2U38_RS13710
C2U38_RS13720	SM00636	C2U38_RS13720
C2U38_RS13725	SM00507	HNH nucleases
C2U38_RS13740	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U38_RS13770	SM00763	PrkA AAA domain
C2U38_RS13795	SM00267	diguanylate cyclase
C2U38_RS13810	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS13835	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U38_RS13835	SM00267	diguanylate cyclase
C2U38_RS13855	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS13885	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13890	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS13920	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U38_RS13920	SM00245	tail specific protease
C2U38_RS13925	SM00945	ProQ/FINO family
C2U38_RS13930	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U38_RS14000	SM00060	Fibronectin type 3 domain
C2U38_RS14065	SM01252	C2U38_RS14065
C2U38_RS14070	SM00409	Immunoglobulin
C2U38_RS14235	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS14255	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS14350	SM00479	C2U38_RS14350
C2U38_RS14415	SM00257	Lysin motif
C2U38_RS14425	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS14440	SM00869	Autotransporter beta-domain
C2U38_RS14450	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS14465	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS14490	SM00448	cheY-homologous receiver domain
C2U38_RS14490	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS14495	SM00387	Histidine kinase-like ATPases
C2U38_RS14500	SM00558	A domain family that is part of the cupin metalloenzyme superfamily.
C2U38_RS14510	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS14530	SM01068	Putative carbohydrate binding domain
C2U38_RS14545	SM00357	Cold shock protein domain
C2U38_RS14550	SM00357	Cold shock protein domain
C2U38_RS14575	SM00952	C2U38_RS14575
C2U38_RS14610	SM00487	DEAD-like helicases superfamily
C2U38_RS14660	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS14745	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U38_RS14745	SM00465	GIY-YIG type nucleases (URI domain)
C2U38_RS14750	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS14750	SM00448	cheY-homologous receiver domain
C2U38_RS14760	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS14765	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS14780	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS14780	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U38_RS14825	SM00642	Alpha-amylase domain
C2U38_RS14870	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS14920	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS14960	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U38_RS15110	SM00528	Domain in histone-like proteins of HNS family
C2U38_RS15170	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS15205	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS15285	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS15295	SM00877	C2U38_RS15295
C2U38_RS15300	SM00877	C2U38_RS15300
C2U38_RS15330	SM00877	C2U38_RS15330
C2U38_RS15335	SM00877	C2U38_RS15335
C2U38_RS15375	SM00877	C2U38_RS15375
C2U38_RS15380	SM00877	C2U38_RS15380
C2U38_RS15410	SM00871	Bacterial transcription activator, effector binding domain
C2U38_RS15415	SM00936	Penicillin-binding protein 5, C-terminal domain 
C2U38_RS15435	SM00479	C2U38_RS15435
C2U38_RS15510	SM00984	UDP binding domain
C2U38_RS15595	SM01350	C2U38_RS15595
C2U38_RS15635	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS15780	SM00226	Low molecular weight phosphatase family
C2U38_RS15790	SM01091	Transporter associated domain
C2U38_RS15815	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS15815	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U38_RS15815	SM00091	PAS domain
C2U38_RS15815	SM00267	diguanylate cyclase
C2U38_RS15820	SM00478	endonuclease III
C2U38_RS15820	SM01009	AlkA N-terminal domain
C2U38_RS15855	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS15855	SM00387	Histidine kinase-like ATPases
C2U38_RS15855	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS15860	SM00448	cheY-homologous receiver domain
C2U38_RS15860	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS15875	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS15875	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U38_RS15885	SM00357	Cold shock protein domain
C2U38_RS15890	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS15960	SM00644	C2U38_RS15960
C2U38_RS15975	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS15980	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS15980	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U38_RS15995	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS15995	SM00079	Eukaryotic homologues of bacterial periplasmic substrate binding proteins.
C2U38_RS16000	SM00046	Diacylglycerol kinase catalytic domain (presumed)
C2U38_RS16005	SM01133	C2U38_RS16005
C2U38_RS16025	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS16025	SM00866	C2U38_RS16025
C2U38_RS16090	SM00448	cheY-homologous receiver domain
C2U38_RS16090	SM00850	LytTr DNA-binding domain
C2U38_RS16095	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U38_RS16100	SM00422	helix_turn_helix, mercury resistance
C2U38_RS16115	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS16130	SM01217	C2U38_RS16130
C2U38_RS16245	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS16255	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS16305	SM00518	AP endonuclease family 2
C2U38_RS16370	SM00841	Elongation factor P, C-terminal
C2U38_RS16370	SM01185	C2U38_RS16370
C2U38_RS16390	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS16405	SM00833	Cobalamin synthesis protein cobW C-terminal domain
C2U38_RS16410	SM00014	Acid phosphatase homologues
C2U38_RS16425	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS16445	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS16465	SM00363	S4 RNA-binding domain
C2U38_RS16470	SM00487	DEAD-like helicases superfamily
C2U38_RS16470	SM00490	helicase superfamily c-terminal domain
C2U38_RS16500	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS16500	SM00448	cheY-homologous receiver domain
C2U38_RS16540	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS16565	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS16595	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U38_RS16595	SM00924	MgtE intracellular N domain
C2U38_RS16600	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS16610	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS16630	SM00387	Histidine kinase-like ATPases
C2U38_RS16635	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS16635	SM00448	cheY-homologous receiver domain
C2U38_RS16640	SM00387	Histidine kinase-like ATPases
C2U38_RS16640	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS16640	SM00448	cheY-homologous receiver domain
C2U38_RS16645	SM00091	PAS domain
C2U38_RS16645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS16645	SM00387	Histidine kinase-like ATPases
C2U38_RS16645	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS16650	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS16650	SM00448	cheY-homologous receiver domain
C2U38_RS16655	SM00882	Coenzyme A transferase
C2U38_RS16660	SM00882	Coenzyme A transferase
C2U38_RS16675	SM00434	DNA Topoisomerase IV
C2U38_RS16740	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS16755	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS16760	SM00346	helix_turn_helix isocitrate lyase regulation
C2U38_RS16765	SM00852	Probable molybdopterin binding domain
C2U38_RS16825	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS16865	SM00260	Two component signalling adaptor domain
C2U38_RS16865	SM00448	cheY-homologous receiver domain
C2U38_RS16905	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS16905	SM00929	NADH-ubiquinone oxidoreductase-G iron-sulfur binding region
C2U38_RS16910	SM00928	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region
C2U38_RS16945	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U38_RS17005	SM00905	Dihydroneopterin aldolase
C2U38_RS17020	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS17035	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS17040	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS17090	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U38_RS17115	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS17130	SM00825	Beta-ketoacyl synthase
C2U38_RS17170	SM00463	Small MutS-related domain
C2U38_RS17235	SM00060	Fibronectin type 3 domain
C2U38_RS17245	SM00232	JAB/MPN domain
C2U38_RS17280	SM00409	Immunoglobulin
C2U38_RS17340	SM00507	HNH nucleases
C2U38_RS17390	SM00778	Zinc-binding domain of primase-helicase
C2U38_RS17395	SM00487	DEAD-like helicases superfamily
C2U38_RS17395	SM00490	helicase superfamily c-terminal domain
C2U38_RS17565	SM00857	Resolvase, N terminal domain
C2U38_RS17580	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS17580	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS17590	SM00448	cheY-homologous receiver domain
C2U38_RS17595	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS17595	SM00387	Histidine kinase-like ATPases
C2U38_RS17595	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS17645	SM00448	cheY-homologous receiver domain
C2U38_RS17645	SM00850	LytTr DNA-binding domain
C2U38_RS17650	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS17725	SM00998	Adenylosuccinate lyase C-terminus
C2U38_RS17820	SM00278	Helix-hairpin-helix DNA-binding motif class 1
C2U38_RS17820	SM00292	breast cancer carboxy-terminal domain
C2U38_RS17820	SM00532	Ligase N family
C2U38_RS17825	SM00771	ZipA, C-terminal domain (FtsZ-binding)
C2U38_RS17865	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS17880	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS17900	SM00822	C2U38_RS17900
C2U38_RS17905	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS17905	SM00895	C2U38_RS17905
C2U38_RS17955	SM00646	C2U38_RS17955
C2U38_RS17965	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS17970	SM00877	C2U38_RS17970
C2U38_RS17975	SM00877	C2U38_RS17975
C2U38_RS18020	SM00877	C2U38_RS18020
C2U38_RS18045	SM00877	C2U38_RS18045
C2U38_RS18050	SM00919	Malic enzyme, NAD binding domain
C2U38_RS18050	SM01274	C2U38_RS18050
C2U38_RS18060	SM00861	Transketolase, pyrimidine binding domain
C2U38_RS18080	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS18080	SM00387	Histidine kinase-like ATPases
C2U38_RS18135	SM01130	C2U38_RS18135
C2U38_RS18220	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS18220	SM00267	diguanylate cyclase
C2U38_RS18235	SM00116	Domain in cystathionine beta-synthase and other proteins.
C2U38_RS18235	SM01240	C2U38_RS18235
C2U38_RS18265	SM00564	beta-propeller repeat
C2U38_RS18285	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS18300	SM00562	C2U38_RS18300
C2U38_RS18310	SM01359	C2U38_RS18310
C2U38_RS18310	SM01360	C2U38_RS18310
C2U38_RS18315	SM00450	Rhodanese Homology Domain
C2U38_RS18345	SM00271	DnaJ molecular chaperone homology domain
C2U38_RS18400	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS18490	SM00829	Enoylreductase
C2U38_RS18500	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS18510	SM00028	Tetratricopeptide repeats
C2U38_RS18535	SM00938	Nitrogen regulatory protein P-II
C2U38_RS18540	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS18540	SM00448	cheY-homologous receiver domain
C2U38_RS18550	SM00387	Histidine kinase-like ATPases
C2U38_RS18550	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS18555	SM01211	C2U38_RS18555
C2U38_RS18560	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS18620	SM00358	Double-stranded RNA binding motif
C2U38_RS18620	SM00535	Ribonuclease III family
C2U38_RS18675	SM00487	DEAD-like helicases superfamily
C2U38_RS18675	SM00490	helicase superfamily c-terminal domain
C2U38_RS18685	SM00986	Uracil DNA glycosylase superfamily
C2U38_RS18685	SM00987	UreE urease accessory protein, C-terminal domain 
C2U38_RS18690	SM00967	RNA 2'-O ribose methyltransferase substrate binding
C2U38_RS18700	SM01144	C2U38_RS18700
C2U38_RS18705	SM00881	CoA binding domain
C2U38_RS18710	SM00155	Phospholipase D. Active site motifs.
C2U38_RS18745	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS18745	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U38_RS18755	SM00363	S4 RNA-binding domain
C2U38_RS18775	SM00830	Chorismate mutase type II
C2U38_RS18780	SM00830	Chorismate mutase type II
C2U38_RS18800	SM00267	diguanylate cyclase
C2U38_RS18830	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS18830	SM00962	SRP54-type protein, GTPase domain
C2U38_RS18830	SM00963	SRP54-type protein, helical bundle domain
C2U38_RS18840	SM01091	Transporter associated domain
C2U38_RS19075	SM00822	C2U38_RS19075
C2U38_RS19090	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS19120	SM00947	Carbonic anhydrase
C2U38_RS19210	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS19210	SM00387	Histidine kinase-like ATPases
C2U38_RS19210	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS19245	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS19310	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS19310	SM00895	C2U38_RS19310
C2U38_RS19315	SM00257	Lysin motif
C2U38_RS19315	SM00749	bacterial OsmY and nodulation domain
C2U38_RS19325	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS19330	SM00450	Rhodanese Homology Domain
C2U38_RS19340	SM00528	Domain in histone-like proteins of HNS family
C2U38_RS19355	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS19390	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS19420	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS19485	SM00863	Threonyl and Alanyl tRNA synthetase second additional domain
C2U38_RS19495	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS19535	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS19535	SM01134	C2U38_RS19535
C2U38_RS19545	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U38_RS19545	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS19550	SM00849	Metallo-beta-lactamase superfamily
C2U38_RS19570	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS19680	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS19695	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS19705	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS19755	SM00487	DEAD-like helicases superfamily
C2U38_RS19880	SM00533	DNA-binding domain of DNA mismatch repair MUTS family
C2U38_RS19880	SM00534	ATPase domain of DNA mismatch repair MUTS family
C2U38_RS19955	SM00257	Lysin motif
C2U38_RS19990	SM01101	C2U38_RS19990
C2U38_RS20015	SM00487	DEAD-like helicases superfamily
C2U38_RS20060	SM00893	Electron transfer flavoprotein domain
C2U38_RS20110	SM01192	C2U38_RS20110
C2U38_RS20110	SM01193	C2U38_RS20110
C2U38_RS20125	SM00954	Region found in RelA / SpoT proteins
C2U38_RS20135	SM00073	Histidine Phosphotransfer domain
C2U38_RS20135	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS20135	SM00387	Histidine kinase-like ATPases
C2U38_RS20135	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS20135	SM00448	cheY-homologous receiver domain
C2U38_RS20145	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS20150	SM00922	Mandelate racemase / muconate lactonizing enzyme, C-terminal domain
C2U38_RS20200	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2U38_RS20200	SM00475	5'-3' exonuclease
C2U38_RS20210	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U38_RS20215	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS20235	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS20255	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS20255	SM01134	C2U38_RS20255
C2U38_RS20295	SM00925	MltA specific insert domain
C2U38_RS20315	SM00646	C2U38_RS20315
C2U38_RS20375	SM00065	Domain present in phytochromes and cGMP-specific phosphodiesterases.
C2U38_RS20390	SM00927	DNA mismatch repair enzyme MutH
C2U38_RS20415	SM00563	Phosphate acyltransferases
C2U38_RS20425	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS20430	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS20525	SM00248	ankyrin repeats
C2U38_RS20585	SM00984	UDP binding domain
C2U38_RS20600	SM00257	Lysin motif
C2U38_RS20665	SM01022	C2U38_RS20665
C2U38_RS20710	SM01011	Aminopeptidase P, N-terminal domain
C2U38_RS20840	SM00846	Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain
C2U38_RS20895	SM00861	Transketolase, pyrimidine binding domain
C2U38_RS20940	SM00731	SprT homologues.
C2U38_RS20965	SM00732	Likely ribonuclease with RNase H fold.
C2U38_RS20995	SM01152	C2U38_RS20995
C2U38_RS21005	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS21010	SM00870	C2U38_RS21010
C2U38_RS21030	SM00478	endonuclease III
C2U38_RS21030	SM00525	C2U38_RS21030
C2U38_RS21275	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS21310	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS21320	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS21350	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS21365	SM00857	Resolvase, N terminal domain
C2U38_RS21400	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS21430	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS21445	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS21545	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS21545	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U38_RS21640	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS21640	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS21695	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS21715	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS21730	SM00563	Phosphate acyltransferases
C2U38_RS21735	SM00434	DNA Topoisomerase IV
C2U38_RS21745	SM00448	cheY-homologous receiver domain
C2U38_RS21745	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS21750	SM00387	Histidine kinase-like ATPases
C2U38_RS21750	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS21765	SM00387	Histidine kinase-like ATPases
C2U38_RS21765	SM00433	TopoisomeraseII
C2U38_RS21885	SM01118	C2U38_RS21885
C2U38_RS21895	SM00287	Bacterial SH3 domain homologues
C2U38_RS21910	SM00905	Dihydroneopterin aldolase
C2U38_RS21915	SM01207	C2U38_RS21915
C2U38_RS21960	SM00988	UreE urease accessory protein, N-terminal domain
C2U38_RS21995	SM00400	zinc finger
C2U38_RS21995	SM00493	C2U38_RS21995
C2U38_RS21995	SM00766	DNA primase DnaG DnaB-binding
C2U38_RS22055	SM00869	Autotransporter beta-domain
C2U38_RS22095	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS22230	SM00091	PAS domain
C2U38_RS22230	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS22245	SM01120	C2U38_RS22245
C2U38_RS22255	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS22270	SM00086	Motif C-terminal to PAS motifs (likely to contribute to PAS structural domain)
C2U38_RS22270	SM00283	Methyl-accepting chemotaxis-like domains (chemotaxis sensory transducer).
C2U38_RS22285	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS22290	SM01038	Beta galactosidase small chain
C2U38_RS22315	SM00642	Alpha-amylase domain
C2U38_RS22335	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS22345	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS22385	SM00858	C2U38_RS22385
C2U38_RS22400	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS22400	SM00895	C2U38_RS22400
C2U38_RS22560	SM00857	Resolvase, N terminal domain
C2U38_RS22605	SM00858	C2U38_RS22605
C2U38_RS22635	SM00829	Enoylreductase
C2U38_RS22640	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS22640	SM01134	C2U38_RS22640
C2U38_RS22670	SM00749	bacterial OsmY and nodulation domain
C2U38_RS22675	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U38_RS22685	SM00465	GIY-YIG type nucleases (URI domain)
C2U38_RS22720	SM00487	DEAD-like helicases superfamily
C2U38_RS22720	SM00490	helicase superfamily c-terminal domain
C2U38_RS22725	SM00028	Tetratricopeptide repeats
C2U38_RS22730	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS22730	SM00322	K homology RNA-binding domain
C2U38_RS22735	SM01387	C2U38_RS22735
C2U38_RS22755	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS22810	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS22820	SM01103	C2U38_RS22820
C2U38_RS22900	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS22930	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS22970	SM00073	Histidine Phosphotransfer domain
C2U38_RS22970	SM00091	PAS domain
C2U38_RS22970	SM00387	Histidine kinase-like ATPases
C2U38_RS22970	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS22970	SM00448	cheY-homologous receiver domain
C2U38_RS22975	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS23030	SM01130	C2U38_RS23030
C2U38_RS23035	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS23035	SM00895	C2U38_RS23035
C2U38_RS23085	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U38_RS23090	SM00228	Domain present in PSD-95, Dlg, and ZO-1/2.
C2U38_RS23150	SM00316	Ribosomal protein S1-like RNA-binding domain
C2U38_RS23180	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS23180	SM00267	diguanylate cyclase
C2U38_RS23185	SM00829	Enoylreductase
C2U38_RS23210	SM00878	Biotin carboxylase C-terminal domain
C2U38_RS23265	SM00507	HNH nucleases
C2U38_RS23400	SM00062	Bacterial periplasmic substrate-binding proteins
C2U38_RS23415	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS23455	SM00387	Histidine kinase-like ATPases
C2U38_RS23460	SM00448	cheY-homologous receiver domain
C2U38_RS23495	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS23505	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS23520	SM00448	cheY-homologous receiver domain
C2U38_RS23520	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS23525	SM00387	Histidine kinase-like ATPases
C2U38_RS23525	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS23570	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS23585	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS23585	SM00866	C2U38_RS23585
C2U38_RS23610	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS23615	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS23625	SM00072	Guanylate kinase homologues.
C2U38_RS23645	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS23645	SM00387	Histidine kinase-like ATPases
C2U38_RS23645	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS23645	SM00448	cheY-homologous receiver domain
C2U38_RS23705	SM00671	Sel1-like repeats.
C2U38_RS23715	SM00028	Tetratricopeptide repeats
C2U38_RS23820	SM00422	helix_turn_helix, mercury resistance
C2U38_RS23825	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS23830	SM00052	Putative diguanylate phosphodiesterase
C2U38_RS23870	SM01005	Alanine racemase, C-terminal domain
C2U38_RS23875	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS23880	SM00829	Enoylreductase
C2U38_RS23920	SM00060	Fibronectin type 3 domain
C2U38_RS23940	SM00232	JAB/MPN domain
C2U38_RS23970	SM00635	Bacterial Ig-like domain 2
C2U38_RS24070	SM00507	HNH nucleases
C2U38_RS24115	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS24230	SM00563	Phosphate acyltransferases
C2U38_RS24255	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS24330	SM00363	S4 RNA-binding domain
C2U38_RS24335	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS24340	SM00450	Rhodanese Homology Domain
C2U38_RS24355	SM01018	B12 binding domain
C2U38_RS24360	SM00346	helix_turn_helix isocitrate lyase regulation
C2U38_RS24415	SM00798	AICARFT/IMPCHase bienzyme
C2U38_RS24415	SM00851	MGS-like domain
C2U38_RS24420	SM01209	C2U38_RS24420
C2U38_RS24420	SM01210	C2U38_RS24420
C2U38_RS24425	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS24425	SM00448	cheY-homologous receiver domain
C2U38_RS24430	SM00387	Histidine kinase-like ATPases
C2U38_RS24430	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS24445	SM00411	bacterial (prokaryotic) histone like domain
C2U38_RS24500	SM00876	Biotin and Thiamin Synthesis associated domain
C2U38_RS24505	SM00357	Cold shock protein domain
C2U38_RS24520	SM00663	RNA polymerase I subunit A N-terminus
C2U38_RS24550	SM00649	Ribosomal protein L11/L12
C2U38_RS24555	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2U38_RS24555	SM00739	KOW (Kyprides, Ouzounis, Woese) motif.
C2U38_RS24670	SM00495	Chitin-binding domain type 3
C2U38_RS24685	SM00859	Semialdehyde dehydrogenase, NAD binding domain
C2U38_RS24705	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS24810	SM00487	DEAD-like helicases superfamily
C2U38_RS24810	SM00490	helicase superfamily c-terminal domain
C2U38_RS24815	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS24835	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS24835	SM01086	C-terminal, D2-small domain, of ClpB protein
C2U38_RS24950	SM00448	cheY-homologous receiver domain
C2U38_RS24950	SM00862	Transcriptional regulatory protein, C terminal
C2U38_RS24955	SM00304	HAMP (Histidine kinases, Adenylyl cyclases, Methyl binding proteins, Phosphatases) domain
C2U38_RS24955	SM00387	Histidine kinase-like ATPases
C2U38_RS24955	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS24970	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS24980	SM01130	C2U38_RS24980
C2U38_RS25000	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS25005	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS25020	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U38_RS25050	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS25100	SM00926	Molybdopterin oxidoreductase Fe4S4 domain
C2U38_RS25180	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS25180	SM01134	C2U38_RS25180
C2U38_RS25195	SM01133	C2U38_RS25195
C2U38_RS25240	SM01230	C2U38_RS25240
C2U38_RS25250	SM00091	PAS domain
C2U38_RS25250	SM00387	Histidine kinase-like ATPases
C2U38_RS25250	SM00388	His Kinase A (phosphoacceptor) domain
C2U38_RS25255	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25255	SM00448	cheY-homologous receiver domain
C2U38_RS25265	SM00729	Elongator protein 3, MiaB family, Radical SAM
C2U38_RS25285	SM00279	Helix-hairpin-helix class 2 (Pol1 family) motifs
C2U38_RS25285	SM00474	3'-5' exonuclease
C2U38_RS25285	SM00475	5'-3' exonuclease
C2U38_RS25285	SM00482	DNA polymerase A domain
C2U38_RS25290	SM00563	Phosphate acyltransferases
C2U38_RS25375	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS25395	SM00738	In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
C2U38_RS25485	SM00341	Helicase and RNase D C-terminal
C2U38_RS25485	SM00487	DEAD-like helicases superfamily
C2U38_RS25485	SM00490	helicase superfamily c-terminal domain
C2U38_RS25485	SM00956	C2U38_RS25485
C2U38_RS25540	SM01219	C2U38_RS25540
C2U38_RS25635	SM00984	UDP binding domain
C2U38_RS25660	SM00357	Cold shock protein domain
C2U38_RS25660	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25660	SM00959	Rho termination factor, N-terminal domain
C2U38_RS25675	SM00487	DEAD-like helicases superfamily
C2U38_RS25675	SM00490	helicase superfamily c-terminal domain
C2U38_RS25740	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25785	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS25785	SM00895	C2U38_RS25785
C2U38_RS25795	SM00354	helix_turn _helix lactose operon repressor
C2U38_RS25815	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25830	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25835	SM00327	von Willebrand factor (vWF) type A domain
C2U38_RS25845	SM00344	helix_turn_helix ASNC type
C2U38_RS25855	SM01228	C2U38_RS25855
C2U38_RS25900	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25940	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS25990	SM01234	C2U38_RS25990
C2U38_RS26005	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS26005	SM00760	Bacterial dnaA protein helix-turn-helix domain
C2U38_RS26010	SM00480	DNA polymerase III beta subunit
C2U38_RS26020	SM00387	Histidine kinase-like ATPases
C2U38_RS26020	SM00433	TopoisomeraseII
C2U38_RS26060	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS26060	SM00866	C2U38_RS26060
C2U38_RS26075	SM00342	helix_turn_helix, arabinose operon control protein
C2U38_RS26160	SM00420	helix_turn_helix, Deoxyribose operon repressor
C2U38_RS26160	SM01134	C2U38_RS26160
C2U38_RS26185	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS26185	SM00448	cheY-homologous receiver domain
C2U38_RS26190	SM00387	Histidine kinase-like ATPases
C2U38_RS26270	SM00327	von Willebrand factor (vWF) type A domain
C2U38_RS26275	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS26370	SM00487	DEAD-like helicases superfamily
C2U38_RS26370	SM00490	helicase superfamily c-terminal domain
C2U38_RS26380	SM00471	Metal dependent phosphohydrolases with conserved 'HD' motif.
C2U38_RS26380	SM00954	Region found in RelA / SpoT proteins
C2U38_RS26385	SM01409	C2U38_RS26385
C2U38_RS26390	SM00072	Guanylate kinase homologues.
C2U38_RS26395	SM00532	Ligase N family
C2U38_RS26455	SM00898	Formamidopyrimidine-DNA glycosylase N-terminal domain
C2U38_RS26455	SM01232	C2U38_RS26455
C2U38_RS26530	SM00829	Enoylreductase
C2U38_RS26560	SM00450	Rhodanese Homology Domain
C2U38_RS26580	SM00971	Serine acetyltransferase, N-terminal
C2U38_RS26600	SM00345	helix_turn_helix gluconate operon transcriptional repressor
C2U38_RS26600	SM00895	C2U38_RS26600
C2U38_RS26700	SM01007	Class II Aldolase and Adducin N-terminal domain
C2U38_RS26710	SM00934	Orotidine 5'-phosphate decarboxylase / HUMPS family
C2U38_RS26740	SM00346	helix_turn_helix isocitrate lyase regulation
C2U38_RS26820	SM00857	Resolvase, N terminal domain
C2U38_RS26845	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS26870	SM00857	Resolvase, N terminal domain
C2U38_RS26945	SM00857	Resolvase, N terminal domain
C2U38_RS26975	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS27090	SM00857	Resolvase, N terminal domain
C2U38_RS27180	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS27195	SM00857	Resolvase, N terminal domain
C2U38_RS27230	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS27235	SM00450	Rhodanese Homology Domain
C2U38_RS27240	SM00857	Resolvase, N terminal domain
C2U38_RS27265	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS27300	SM00857	Resolvase, N terminal domain
C2U38_RS27305	SM00857	Resolvase, N terminal domain
C2U38_RS27370	SM00829	Enoylreductase
C2U38_RS27375	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS27400	SM00347	helix_turn_helix multiple antibiotic resistance protein
C2U38_RS27470	SM00857	Resolvase, N terminal domain
C2U38_RS27625	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS27680	SM00470	ParB-like nuclease domain
C2U38_RS27740	SM00966	SpoVT / AbrB like domain 
C2U38_RS27825	SM00953	C2U38_RS27825
C2U38_RS27870	SM00642	Alpha-amylase domain
C2U38_RS27895	SM00421	helix_turn_helix, Lux Regulon
C2U38_RS27915	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS27945	SM00857	Resolvase, N terminal domain
C2U38_RS28020	SM00470	ParB-like nuclease domain
C2U38_RS28075	SM00267	diguanylate cyclase
C2U38_RS28110	SM00382	ATPases associated with a variety of cellular activities
C2U38_RS28195	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS28260	SM00530	Helix-turn-helix XRE-family like proteins 
C2U38_RS28275	SM00418	helix_turn_helix, Arsenical Resistance Operon Repressor
C2U38_RS28395	SM01038	Beta galactosidase small chain
C2U38_RS28400	SM00354	helix_turn _helix lactose operon repressor
