locus-tag class description AM352_RS00010 PF03717 Penicillin-binding Protein dimerisation domain AM352_RS00010 PF00905 Penicillin binding protein transpeptidase domain AM352_RS00015 PF04999 Cell division protein FtsL AM352_RS00020 PF01795 MraW methylase family AM352_RS00025 PF02381 MraZ protein, putative antitoxin-like AM352_RS00030 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM352_RS00030 PF00356 Bacterial regulatory proteins, lacI family AM352_RS00035 PF10369 Small subunit of acetolactate synthase AM352_RS00040 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS00040 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS00040 PF00205 Thiamine pyrophosphate enzyme, central domain AM352_RS00045 PF03466 LysR substrate binding domain AM352_RS00045 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS00050 PF08054 Leucine operon leader peptide AM352_RS00055 PF00682 HMGL-like AM352_RS00055 PF08502 LeuA allosteric (dimerisation) domain AM352_RS00060 PF00180 Isocitrate/isopropylmalate dehydrogenase AM352_RS00065 PF00330 Aconitase family (aconitate hydratase) AM352_RS00070 PF00694 Aconitase C-terminal domain AM352_RS00075 PF07690 Major Facilitator Superfamily AM352_RS00085 PF12793 Sugar transport-related sRNA regulator N-term AM352_RS00085 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS00095 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS00100 PF00005 ABC transporter AM352_RS00105 PF09335 SNARE associated Golgi protein AM352_RS00110 PF12833 Helix-turn-helix domain AM352_RS00110 PF02311 AraC-like ligand binding domain AM352_RS00115 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS00120 PF11762 L-arabinose isomerase C-terminal domain AM352_RS00120 PF02610 L-arabinose isomerase AM352_RS00125 PF00596 Class II Aldolase and Adducin N-terminal domain AM352_RS00130 PF00136 DNA polymerase family B AM352_RS00130 PF03104 DNA polymerase family B, exonuclease domain AM352_RS00135 PF18337 RapA N-terminal Tudor like domain AM352_RS00135 PF12137 RNA polymerase recycling family C-terminal AM352_RS00135 PF00176 SNF2 family N-terminal domain AM352_RS00135 PF18339 RapA N-terminal Tudor like domain 1 AM352_RS00135 PF00271 Helicase conserved C-terminal domain AM352_RS00140 PF00849 RNA pseudouridylate synthase AM352_RS00145 PF00226 DnaJ domain AM352_RS00145 PF05099 Tellurite resistance protein TerB AM352_RS00155 PF04453 LPS transport system D AM352_RS00155 PF03968 OstA-like protein AM352_RS00160 PF09312 SurA N-terminal domain AM352_RS00160 PF00639 PPIC-type PPIASE domain AM352_RS00165 PF04166 Pyridoxal phosphate biosynthetic protein PdxA AM352_RS00170 PF00398 Ribosomal RNA adenine dimethylase AM352_RS00175 PF04379 ApaG domain AM352_RS00180 PF00149 Calcineurin-like phosphoesterase AM352_RS00185 PF00186 Dihydrofolate reductase AM352_RS00200 PF00999 Sodium/hydrogen exchanger family AM352_RS00200 PF02254 TrkA-N domain AM352_RS00205 PF02525 Flavodoxin-like fold AM352_RS00210 PF06004 Bacterial protein of unknown function (DUF903) AM352_RS00215 PF00083 Sugar (and other) transporter AM352_RS00225 PF01494 FAD binding domain AM352_RS00230 PF00766 Electron transfer flavoprotein FAD-binding domain AM352_RS00230 PF01012 Electron transfer flavoprotein domain AM352_RS00235 PF01012 Electron transfer flavoprotein domain AM352_RS00240 PF02028 BCCT, betaine/carnitine/choline family transporter AM352_RS00245 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM352_RS00245 PF02770 Acyl-CoA dehydrogenase, middle domain AM352_RS00245 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM352_RS00260 PF02515 CoA-transferase family III AM352_RS00265 PF00501 AMP-binding enzyme AM352_RS00265 PF13193 AMP-binding enzyme C-terminal domain AM352_RS00270 PF00378 Enoyl-CoA hydratase/isomerase AM352_RS00275 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS00280 PF07180 CaiF/GrlA transcriptional regulator AM352_RS00285 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain AM352_RS00285 PF02142 MGS-like domain AM352_RS00285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM352_RS00290 PF00117 Glutamine amidotransferase class-I AM352_RS00290 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain AM352_RS00295 PF01113 Dihydrodipicolinate reductase, N-terminus AM352_RS00295 PF05173 Dihydrodipicolinate reductase, C-terminus AM352_RS00305 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS00305 PF03466 LysR substrate binding domain AM352_RS00310 PF01156 Inosine-uridine preferring nucleoside hydrolase AM352_RS00315 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM352_RS00320 PF03390 2-hydroxycarboxylate transporter family AM352_RS00330 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS00330 PF17203 Single cache domain 3 AM352_RS00335 PF00072 Response regulator receiver domain AM352_RS00335 PF12431 Transcriptional regulator AM352_RS00340 PF02401 LytB protein AM352_RS00345 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM352_RS00350 PF01252 Signal peptidase (SPase) II AM352_RS00355 PF08264 Anticodon-binding domain of tRNA AM352_RS00355 PF06827 Zinc finger found in FPG and IleRS AM352_RS00355 PF00133 tRNA synthetases class I (I, L, M and V) AM352_RS00360 PF01687 Riboflavin kinase AM352_RS00360 PF06574 FAD synthetase AM352_RS00365 PF10837 Protein of unknown function (DUF2575) AM352_RS00370 PF01649 Ribosomal protein S20 AM352_RS00375 PF03466 LysR substrate binding domain AM352_RS00375 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS00380 PF06965 Na+/H+ antiporter 1 AM352_RS00385 PF00226 DnaJ domain AM352_RS00385 PF00684 DnaJ central domain AM352_RS00385 PF01556 DnaJ C terminal domain AM352_RS00390 PF00012 Hsp70 protein AM352_RS00395 PF01184 GPR1/FUN34/yaaH family AM352_RS00400 PF07690 Major Facilitator Superfamily AM352_RS00405 PF00994 Probable molybdopterin binding domain AM352_RS00410 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM352_RS00415 PF01235 Sodium:alanine symporter family AM352_RS00420 PF03883 Peroxide stress protein YaaA AM352_RS00425 PF10697 Protein of unknown function (DUF2502) AM352_RS00430 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS00430 PF14821 Threonine synthase N terminus AM352_RS00435 PF00288 GHMP kinases N terminal domain AM352_RS00435 PF08544 GHMP kinases C terminal AM352_RS00440 PF03447 Homoserine dehydrogenase, NAD binding domain AM352_RS00440 PF01842 ACT domain AM352_RS00440 PF00742 Homoserine dehydrogenase AM352_RS00440 PF13840 ACT domain AM352_RS00440 PF00696 Amino acid kinase family AM352_RS00445 PF08254 Threonine leader peptide AM352_RS00450 PF00588 SpoU rRNA Methylase family AM352_RS00460 PF00072 Response regulator receiver domain AM352_RS00460 PF00486 Transcriptional regulatory protein, C terminal AM352_RS00465 PF05981 CreA protein AM352_RS00470 PF12833 Helix-turn-helix domain AM352_RS00470 PF06445 GyrI-like small molecule binding domain AM352_RS00475 PF00300 Histidine phosphatase superfamily (branch 1) AM352_RS00480 PF01931 Protein of unknown function DUF84 AM352_RS00485 PF01371 Trp repressor protein AM352_RS00490 PF14718 Soluble lytic murein transglycosylase L domain AM352_RS00490 PF01464 Transglycosylase SLT domain AM352_RS00500 PF12848 ABC transporter AM352_RS00500 PF00005 ABC transporter AM352_RS00505 PF01381 Helix-turn-helix AM352_RS00505 PF13521 AAA domain AM352_RS00510 PF18073 Rubredoxin metal binding domain AM352_RS00515 PF18429 Domain of unknown function (DUF5609) AM352_RS00520 PF10144 Bacterial virulence factor haemolysin AM352_RS00525 PF03099 Biotin/lipoate A/B protein ligase family AM352_RS00525 PF10437 Bacterial lipoate protein ligase C-terminus AM352_RS00535 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS00540 PF13953 PapC C-terminal domain AM352_RS00540 PF00577 Outer membrane usher protein AM352_RS00540 PF13954 PapC N-terminal domain AM352_RS00550 PF01048 Phosphorylase superfamily AM352_RS00555 PF01676 Metalloenzyme superfamily AM352_RS00560 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain AM352_RS00560 PF00591 Glycosyl transferase family, a/b domain AM352_RS00560 PF02885 Glycosyl transferase family, helical bundle domain AM352_RS00565 PF01791 DeoC/LacD family aldolase AM352_RS00570 PF11230 Protein of unknown function (DUF3029) AM352_RS00575 PF04055 Radical SAM superfamily AM352_RS00580 PF01026 TatD related DNase AM352_RS00585 PF01734 Patatin-like phospholipase AM352_RS00590 PF07043 Protein of unknown function (DUF1328) AM352_RS00595 PF04972 BON domain AM352_RS00600 PF16658 Class II release factor RF3, C-terminal domain AM352_RS00600 PF03144 Elongation factor Tu domain 2 AM352_RS00600 PF00009 Elongation factor Tu GTP binding domain AM352_RS00605 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS00610 PF00583 Acetyltransferase (GNAT) family AM352_RS00615 PF03603 DNA polymerase III psi subunit AM352_RS00620 PF05175 Methyltransferase small domain AM352_RS00620 PF08468 Methyltransferase small domain N-terminal AM352_RS00640 PF07256 Protein of unknown function (DUF1435) AM352_RS00645 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS00650 PF06276 Ferric iron reductase FhuF-like transporter AM352_RS00650 PF11575 FhuF 2Fe-2S C-terminal domain AM352_RS00655 PF02378 Phosphotransferase system, EIIC AM352_RS00660 PF04073 Aminoacyl-tRNA editing domain AM352_RS00665 PF00196 Bacterial regulatory proteins, luxR family AM352_RS00670 PF00196 Bacterial regulatory proteins, luxR family AM352_RS00675 PF06738 Putative threonine/serine exporter AM352_RS00680 PF12821 Threonine/Serine exporter, ThrE AM352_RS00685 PF17948 DnaT DNA-binding domain AM352_RS00690 PF01695 IstB-like ATP binding protein AM352_RS00695 PF10696 Protein of unknown function (DUF2501) AM352_RS00700 PF00884 Sulfatase AM352_RS00705 PF00583 Acetyltransferase (GNAT) family AM352_RS00710 PF02203 Tar ligand binding domain homologue AM352_RS00710 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS00710 PF00672 HAMP domain AM352_RS00720 PF13722 5TM C-terminal transporter carbon starvation CstA AM352_RS00720 PF02554 Carbon starvation protein CstA AM352_RS00725 PF04328 Selenoprotein, putative AM352_RS00730 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM352_RS00730 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM352_RS00740 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS00740 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS00750 PF06568 Domain of unknown function (DUF1127) AM352_RS00755 PF00155 Aminotransferase class I and II AM352_RS00755 PF00392 Bacterial regulatory proteins, gntR family AM352_RS00760 PF04754 Putative transposase, YhgA-like AM352_RS00765 PF07690 Major Facilitator Superfamily AM352_RS00770 PF04286 Protein of unknown function (DUF445) AM352_RS00775 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component AM352_RS00780 PF01869 BadF/BadG/BcrA/BcrD ATPase family AM352_RS00785 PF11823 Protein of unknown function (DUF3343) AM352_RS00790 PF06779 Uncharacterised MFS-type transporter YbfB AM352_RS00795 PF00579 tRNA synthetases class I (W and Y) AM352_RS00800 PF03222 Tryptophan/tyrosine permease family AM352_RS00805 PF01212 Beta-eliminating lyase AM352_RS00825 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM352_RS00830 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM352_RS00835 PF04002 RadC-like JAB domain AM352_RS00840 PF03230 Antirestriction protein AM352_RS00845 PF06067 Domain of unknown function (DUF932) AM352_RS00860 PF01926 50S ribosome-binding GTPase AM352_RS00875 PF13476 AAA domain AM352_RS00885 PF00270 DEAD/DEAH box helicase AM352_RS00885 PF08494 DEAD/H associated AM352_RS00885 PF00271 Helicase conserved C-terminal domain AM352_RS00935 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) AM352_RS00935 PF18766 SWI2/SNF2 ATPase AM352_RS00935 PF11867 Domain of unknown function (DUF3387) AM352_RS00940 PF01420 Type I restriction modification DNA specificity domain AM352_RS00945 PF02384 N-6 DNA Methylase AM352_RS00945 PF12161 HsdM N-terminal domain AM352_RS00950 PF02384 N-6 DNA Methylase AM352_RS00960 PF00589 Phage integrase family AM352_RS00960 PF13356 Arm DNA-binding domain AM352_RS00970 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS00970 PF00107 Zinc-binding dehydrogenase AM352_RS00975 PF05872 Bacterial protein of unknown function (DUF853) AM352_RS00980 PF03739 Lipopolysaccharide export system permease LptF/LptG AM352_RS00985 PF03739 Lipopolysaccharide export system permease LptF/LptG AM352_RS00995 PF02789 Cytosol aminopeptidase family, N-terminal domain AM352_RS00995 PF00883 Cytosol aminopeptidase family, catalytic domain AM352_RS01000 PF04364 DNA polymerase III chi subunit, HolC AM352_RS01005 PF08264 Anticodon-binding domain of tRNA AM352_RS01005 PF00133 tRNA synthetases class I (I, L, M and V) AM352_RS01005 PF10458 Valyl tRNA synthetase tRNA binding arm AM352_RS01020 PF00583 Acetyltransferase (GNAT) family AM352_RS01025 PF06877 Regulator of ribonuclease activity B AM352_RS01030 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM352_RS01030 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM352_RS01035 PF04074 YhcH/YjgK/YiaL AM352_RS01050 PF00696 Amino acid kinase family AM352_RS01055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM352_RS01055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM352_RS01060 PF03606 C4-dicarboxylate anaerobic carrier AM352_RS01065 PF01316 Arginine repressor, DNA binding domain AM352_RS01065 PF02863 Arginine repressor, C-terminal domain AM352_RS01075 PF08052 PyrBI operon leader peptide AM352_RS01080 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain AM352_RS01080 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain AM352_RS01085 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain AM352_RS01085 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain AM352_RS01090 PF01042 Endoribonuclease L-PSP AM352_RS01095 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM352_RS01105 PF00690 Cation transporter/ATPase, N-terminus AM352_RS01105 PF00689 Cation transporting ATPase, C-terminus AM352_RS01115 PF00356 Bacterial regulatory proteins, lacI family AM352_RS01120 PF00367 phosphotransferase system, EIIB AM352_RS01120 PF02378 Phosphotransferase system, EIIC AM352_RS01125 PF11941 Domain of unknown function (DUF3459) AM352_RS01125 PF00128 Alpha amylase, catalytic domain AM352_RS01135 PF01380 SIS domain AM352_RS01135 PF01418 Helix-turn-helix domain, rpiR family AM352_RS01140 PF02378 Phosphotransferase system, EIIC AM352_RS01145 PF09261 Alpha mannosidase middle domain AM352_RS01145 PF01074 Glycosyl hydrolases family 38 N-terminal domain AM352_RS01145 PF07748 Glycosyl hydrolases family 38 C-terminal domain AM352_RS01150 PF00128 Alpha amylase, catalytic domain AM352_RS01155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS01155 PF02378 Phosphotransferase system, EIIC AM352_RS01155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS01160 PF03477 ATP cone domain AM352_RS01160 PF13597 Anaerobic ribonucleoside-triphosphate reductase AM352_RS01170 PF08279 HTH domain AM352_RS01170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS01170 PF00874 PRD domain AM352_RS01170 PF05043 Mga helix-turn-helix domain AM352_RS01175 PF07071 KDGP aldolase AM352_RS01180 PF03841 L-seryl-tRNA selenium transferase AM352_RS01185 PF01979 Amidohydrolase family AM352_RS01215 PF07361 Cytochrome b562 AM352_RS01220 PF01523 Putative modulator of DNA gyrase AM352_RS01225 PF04751 Protein of unknown function (DUF615) AM352_RS01230 PF01225 Mur ligase family, catalytic domain AM352_RS01230 PF08245 Mur ligase middle domain AM352_RS01230 PF02875 Mur ligase family, glutamate ligase domain AM352_RS01235 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain AM352_RS01240 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS01240 PF02203 Tar ligand binding domain homologue AM352_RS01240 PF00672 HAMP domain AM352_RS01245 PF02653 Branched-chain amino acid transport system / permease component AM352_RS01250 PF02653 Branched-chain amino acid transport system / permease component AM352_RS01255 PF00005 ABC transporter AM352_RS01260 PF13407 Periplasmic binding protein domain AM352_RS01265 PF00719 Inorganic pyrophosphatase AM352_RS01270 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like AM352_RS01275 PF04357 TamB, inner membrane protein subunit of TAM complex AM352_RS01280 PF07244 Surface antigen variable number repeat AM352_RS01280 PF17243 POTRA domain TamA domain 1 AM352_RS01280 PF01103 Surface antigen AM352_RS01285 PF01625 Peptide methionine sulfoxide reductase AM352_RS01290 PF03471 Transporter associated domain AM352_RS01290 PF01595 Cyclin M transmembrane N-terminal domain AM352_RS01290 PF00571 CBS domain AM352_RS01295 PF06526 Protein of unknown function (DUF1107) AM352_RS01300 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) AM352_RS01305 PF00459 Inositol monophosphatase family AM352_RS01310 PF00149 Calcineurin-like phosphoesterase AM352_RS01310 PF02872 5'-nucleotidase, C-terminal domain AM352_RS01315 PF01638 HxlR-like helix-turn-helix AM352_RS01320 PF05368 NmrA-like family AM352_RS01330 PF00892 EamA-like transporter family AM352_RS01335 PF02203 Tar ligand binding domain homologue AM352_RS01335 PF00672 HAMP domain AM352_RS01335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS01340 PF04405 Domain of Unknown function (DUF542) AM352_RS01340 PF01814 Hemerythrin HHE cation binding domain AM352_RS01345 PF00324 Amino acid permease AM352_RS01350 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM352_RS01350 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM352_RS01355 PF08525 Opacity-associated protein A N-terminal motif AM352_RS01355 PF04225 Opacity-associated protein A LysM-like domain AM352_RS01365 PF03948 Ribosomal protein L9, C-terminal domain AM352_RS01365 PF01281 Ribosomal protein L9, N-terminal domain AM352_RS01370 PF01084 Ribosomal protein S18 AM352_RS01375 PF00436 Single-strand binding protein family AM352_RS01380 PF01250 Ribosomal protein S6 AM352_RS01385 PF07338 Protein of unknown function (DUF1471) AM352_RS01390 PF00596 Class II Aldolase and Adducin N-terminal domain AM352_RS01395 PF01261 Xylose isomerase-like TIM barrel AM352_RS01400 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM352_RS01405 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS01410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS01415 PF03611 PTS system sugar-specific permease component AM352_RS01425 PF08220 DeoR-like helix-turn-helix domain AM352_RS01425 PF00455 DeoR C terminal sensor domain AM352_RS01430 PF00326 Prolyl oligopeptidase family AM352_RS01435 PF07338 Protein of unknown function (DUF1471) AM352_RS01440 PF07338 Protein of unknown function (DUF1471) AM352_RS01445 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM352_RS01445 PF18158 Adaptive response protein AidB N-terminal domain AM352_RS01445 PF02770 Acyl-CoA dehydrogenase, middle domain AM352_RS01450 PF00588 SpoU rRNA Methylase family AM352_RS01450 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM352_RS01455 PF00773 RNB domain AM352_RS01455 PF00575 S1 RNA binding domain AM352_RS01455 PF08206 Ribonuclease B OB domain AM352_RS01455 PF08461 Ribonuclease R winged-helix domain AM352_RS01455 PF17876 Cold shock domain AM352_RS01460 PF02082 Transcriptional regulator AM352_RS01470 PF00709 Adenylosuccinate synthetase AM352_RS01475 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) AM352_RS01480 PF01145 SPFH domain / Band 7 family AM352_RS01485 PF01145 SPFH domain / Band 7 family AM352_RS01485 PF12221 Bacterial membrane protein N terminal AM352_RS01490 PF13167 GTP-binding GTPase N-terminal AM352_RS01490 PF16360 GTP-binding GTPase Middle Region AM352_RS01490 PF01926 50S ribosome-binding GTPase AM352_RS01495 PF17209 Hfq protein AM352_RS01505 PF01119 DNA mismatch repair protein, C-terminal domain AM352_RS01505 PF08676 MutL C terminal dimerisation domain AM352_RS01510 PF01520 N-acetylmuramoyl-L-alanine amidase AM352_RS01515 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE AM352_RS01520 PF03853 YjeF-related protein N-terminus AM352_RS01520 PF01256 Carbohydrate kinase AM352_RS01525 PF08331 Domain of unknown function (DUF1730) AM352_RS01545 PF00929 Exonuclease AM352_RS01555 PF03193 RsgA GTPase AM352_RS01560 PF02666 Phosphatidylserine decarboxylase AM352_RS01565 PF00924 Mechanosensitive ion channel AM352_RS01565 PF12795 Mechanosensitive ion channel porin domain AM352_RS01565 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM352_RS01570 PF13520 Amino acid permease AM352_RS01575 PF00152 tRNA synthetases class II (D, K and N) AM352_RS01580 PF02910 Fumarate reductase flavoprotein C-term AM352_RS01580 PF00890 FAD binding domain AM352_RS01585 PF13085 2Fe-2S iron-sulfur cluster binding domain AM352_RS01585 PF13183 4Fe-4S dicluster domain AM352_RS01590 PF02300 Fumarate reductase subunit C AM352_RS01595 PF02313 Fumarate reductase subunit D AM352_RS01600 PF08212 Lipocalin-like domain AM352_RS01605 PF00893 Small Multidrug Resistance protein AM352_RS01615 PF00196 Bacterial regulatory proteins, luxR family AM352_RS01620 PF08085 Entericidin EcnA/B family AM352_RS01625 PF08085 Entericidin EcnA/B family AM352_RS01630 PF08207 Elongation factor P (EF-P) KOW-like domain AM352_RS01630 PF01132 Elongation factor P (EF-P) OB domain AM352_RS01630 PF09285 Elongation factor P, C-terminal AM352_RS01635 PF04055 Radical SAM superfamily AM352_RS01640 PF15922 YjeJ-like AM352_RS01645 PF13698 Domain of unknown function (DUF4156) AM352_RS01650 PF00118 TCP-1/cpn60 chaperonin family AM352_RS01655 PF00166 Chaperonin 10 Kd subunit AM352_RS01660 PF13520 Amino acid permease AM352_RS01665 PF04186 FxsA cytoplasmic membrane protein AM352_RS01675 PF00206 Lyase AM352_RS01675 PF10415 Fumarase C C-terminus AM352_RS01680 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM352_RS01685 PF03091 CutA1 divalent ion tolerance protein AM352_RS01690 PF11412 Disulphide bond corrector protein DsbC AM352_RS01690 PF02683 Cytochrome C biogenesis protein transmembrane region AM352_RS01710 PF00589 Phage integrase family AM352_RS01715 PF00589 Phage integrase family AM352_RS01720 PF00419 Fimbrial protein AM352_RS01725 PF00419 Fimbrial protein AM352_RS01730 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS01730 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS01735 PF13953 PapC C-terminal domain AM352_RS01735 PF00577 Outer membrane usher protein AM352_RS01735 PF13954 PapC N-terminal domain AM352_RS01740 PF00419 Fimbrial protein AM352_RS01750 PF00419 Fimbrial protein AM352_RS01750 PF09160 FimH, mannose binding AM352_RS01760 PF02203 Tar ligand binding domain homologue AM352_RS01760 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS01760 PF00672 HAMP domain AM352_RS01765 PF03949 Malic enzyme, NAD binding domain AM352_RS01765 PF00390 Malic enzyme, N-terminal domain AM352_RS01770 PF03606 C4-dicarboxylate anaerobic carrier AM352_RS01780 PF10397 Adenylosuccinate lyase C-terminus AM352_RS01780 PF00206 Lyase AM352_RS01785 PF00267 Gram-negative porin AM352_RS01800 PF00593 TonB dependent receptor AM352_RS01800 PF07715 TonB-dependent Receptor Plug Domain AM352_RS01805 PF00356 Bacterial regulatory proteins, lacI family AM352_RS01820 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component AM352_RS01830 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS01830 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS01840 PF02614 Glucuronate isomerase AM352_RS01845 PF03786 D-mannonate dehydratase (UxuA) AM352_RS01860 PF00593 TonB dependent receptor AM352_RS01860 PF07715 TonB-dependent Receptor Plug Domain AM352_RS01865 PF05171 Haemin-degrading HemS.ChuX domain AM352_RS01870 PF01497 Periplasmic binding protein AM352_RS01875 PF01032 FecCD transport family AM352_RS01880 PF00005 ABC transporter AM352_RS01885 PF03824 High-affinity nickel-transport protein AM352_RS01890 PF17203 Single cache domain 3 AM352_RS01890 PF00989 PAS fold AM352_RS01890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS01890 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM352_RS01895 PF00072 Response regulator receiver domain AM352_RS01900 PF03605 Anaerobic c4-dicarboxylate membrane transporter AM352_RS01905 PF05683 Fumarase C-terminus AM352_RS01905 PF05681 Fumarate hydratase (Fumerase) AM352_RS01910 PF00884 Sulfatase AM352_RS01910 PF08019 Phosphoethanolamine transferase EptA/EptB AM352_RS01915 PF00486 Transcriptional regulatory protein, C terminal AM352_RS01915 PF00072 Response regulator receiver domain AM352_RS01920 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS01920 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS01930 PF08946 Osmosensory transporter coiled coil AM352_RS01930 PF00083 Sugar (and other) transporter AM352_RS01935 PF03812 2-keto-3-deoxygluconate permease AM352_RS01940 PF13990 YjcZ-like protein AM352_RS01945 PF00350 Dynamin family AM352_RS01950 PF08274 PhnA Zinc-Ribbon AM352_RS01950 PF03831 PhnA domain AM352_RS01955 PF06983 3-demethylubiquinone-9 3-methyltransferase AM352_RS01960 PF00005 ABC transporter AM352_RS01970 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS01975 PF00392 Bacterial regulatory proteins, gntR family AM352_RS01975 PF07702 UTRA domain AM352_RS01980 PF06754 Phosphonate metabolism protein PhnG AM352_RS01985 PF05845 Bacterial phosphonate metabolism protein (PhnH) AM352_RS01990 PF05861 Bacterial phosphonate metabolism protein (PhnI) AM352_RS01995 PF06007 Phosphonate metabolism protein PhnJ AM352_RS02000 PF00005 ABC transporter AM352_RS02005 PF00005 ABC transporter AM352_RS02010 PF07969 Amidohydrolase family AM352_RS02020 PF00583 Acetyltransferase (GNAT) family AM352_RS02025 PF12706 Beta-lactamase superfamily domain AM352_RS02035 PF02502 Ribose/Galactose Isomerase AM352_RS02040 PF01380 SIS domain AM352_RS02040 PF01418 Helix-turn-helix domain, rpiR family AM352_RS02045 PF13407 Periplasmic binding protein domain AM352_RS02050 PF00005 ABC transporter AM352_RS02055 PF02653 Branched-chain amino acid transport system / permease component AM352_RS02060 PF00834 Ribulose-phosphate 3 epimerase family AM352_RS02065 PF00480 ROK family AM352_RS02070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS02070 PF00072 Response regulator receiver domain AM352_RS02070 PF13426 PAS domain AM352_RS02080 PF00005 ABC transporter AM352_RS02085 PF02653 Branched-chain amino acid transport system / permease component AM352_RS02090 PF13407 Periplasmic binding protein domain AM352_RS02100 PF01116 Fructose-bisphosphate aldolase class-II AM352_RS02110 PF00072 Response regulator receiver domain AM352_RS02110 PF00486 Transcriptional regulatory protein, C terminal AM352_RS02120 PF08238 Sel1 repeat AM352_RS02125 PF00375 Sodium:dicarboxylate symporter family AM352_RS02135 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM352_RS02135 PF01578 Cytochrome C assembly protein AM352_RS02140 PF03916 Polysulphide reductase, NrfD AM352_RS02145 PF00037 4Fe-4S binding domain AM352_RS02145 PF13247 4Fe-4S dicluster domain AM352_RS02150 PF13435 Cytochrome c554 and c-prime AM352_RS02150 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) AM352_RS02155 PF02335 Cytochrome c552 AM352_RS02160 PF13193 AMP-binding enzyme C-terminal domain AM352_RS02160 PF00501 AMP-binding enzyme AM352_RS02160 PF16177 Acetyl-coenzyme A synthetase N-terminus AM352_RS02165 PF04341 Protein of unknown function, DUF485 AM352_RS02170 PF00474 Sodium:solute symporter family AM352_RS02175 PF04172 LrgB-like family AM352_RS02180 PF03788 LrgA family AM352_RS02185 PF03466 LysR substrate binding domain AM352_RS02185 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS02195 PF00999 Sodium/hydrogen exchanger family AM352_RS02200 PF00860 Permease family AM352_RS02215 PF00043 Glutathione S-transferase, C-terminal domain AM352_RS02215 PF02798 Glutathione S-transferase, N-terminal domain AM352_RS02225 PF09278 MerR, DNA binding AM352_RS02225 PF00376 MerR family regulatory protein AM352_RS02230 PF12833 Helix-turn-helix domain AM352_RS02235 PF12792 CSS motif domain associated with EAL AM352_RS02235 PF00563 EAL domain AM352_RS02245 PF15940 Family of unknown function AM352_RS02250 PF08281 Sigma-70, region 4 AM352_RS02250 PF04542 Sigma-70 region 2 AM352_RS02255 PF16220 Domain of unknown function (DUF4880) AM352_RS02255 PF04773 FecR protein AM352_RS02260 PF07660 Secretin and TonB N terminus short domain AM352_RS02260 PF00593 TonB dependent receptor AM352_RS02260 PF07715 TonB-dependent Receptor Plug Domain AM352_RS02265 PF01497 Periplasmic binding protein AM352_RS02270 PF01032 FecCD transport family AM352_RS02275 PF01032 FecCD transport family AM352_RS02280 PF00005 ABC transporter AM352_RS02285 PF00690 Cation transporter/ATPase, N-terminus AM352_RS02285 PF00689 Cation transporting ATPase, C-terminus AM352_RS02295 PF00582 Universal stress protein family AM352_RS02300 PF00436 Single-strand binding protein family AM352_RS02310 PF17760 UvrA interaction domain AM352_RS02310 PF17755 UvrA DNA-binding domain AM352_RS02310 PF00005 ABC transporter AM352_RS02315 PF04237 YjbR AM352_RS02320 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) AM352_RS02325 PF00155 Aminotransferase class I and II AM352_RS02330 PF01168 Alanine racemase, N-terminal domain AM352_RS02330 PF00842 Alanine racemase, C-terminal domain AM352_RS02335 PF03796 DnaB-like helicase C terminal domain AM352_RS02335 PF00772 DnaB-like helicase N terminal domain AM352_RS02340 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS02340 PF00107 Zinc-binding dehydrogenase AM352_RS02345 PF09583 Phage shock protein G (Phageshock_PspG) AM352_RS02350 PF01207 Dihydrouridine synthase (Dus) AM352_RS02365 PF05638 Type VI secretion system effector, Hcp AM352_RS02370 PF01475 Ferric uptake regulator family AM352_RS02375 PF05532 CsbD-like AM352_RS02380 PF01554 MatE AM352_RS02385 PF01726 LexA DNA binding domain AM352_RS02385 PF00717 Peptidase S24-like AM352_RS02390 PF01219 Prokaryotic diacylglycerol kinase AM352_RS02400 PF01553 Acyltransferase AM352_RS02405 PF01040 UbiA prenyltransferase family AM352_RS02410 PF04345 Chorismate lyase AM352_RS02415 PF07148 Maltose operon periplasmic protein precursor (MalM) AM352_RS02420 PF02264 LamB porin AM352_RS02425 PF00005 ABC transporter AM352_RS02425 PF17912 MalK OB fold domain AM352_RS02430 PF01547 Bacterial extracellular solute-binding protein AM352_RS02435 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS02435 PF14785 Maltose transport system permease protein MalF P2 domain AM352_RS02440 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS02445 PF06146 Phosphate-starvation-inducible E AM352_RS02450 PF06082 Exopolysaccharide biosynthesis protein YbjH AM352_RS02455 PF06251 Capsule biosynthesis GfcC AM352_RS02460 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF AM352_RS02465 PF11106 Exopolysaccharide production protein YjbE AM352_RS02470 PF00342 Phosphoglucose isomerase AM352_RS02475 PF00696 Amino acid kinase family AM352_RS02475 PF01842 ACT domain AM352_RS02480 PF01758 Sodium Bile acid symporter family AM352_RS02485 PF11656 YjbD family (DUF3811) AM352_RS02490 PF00849 RNA pseudouridylate synthase AM352_RS02490 PF01479 S4 domain AM352_RS02495 PF03575 Peptidase family S51 AM352_RS02500 PF02690 Na+/Pi-cotransporter AM352_RS02505 PF02310 B12 binding domain AM352_RS02505 PF02607 B12 binding domain AM352_RS02505 PF02965 Vitamin B12 dependent methionine synthase, activation domain AM352_RS02505 PF00809 Pterin binding enzyme AM352_RS02505 PF02574 Homocysteine S-methyltransferase AM352_RS02510 PF09339 IclR helix-turn-helix domain AM352_RS02510 PF01614 Bacterial transcriptional regulator AM352_RS02515 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) AM352_RS02520 PF00463 Isocitrate lyase family AM352_RS02525 PF01274 Malate synthase AM352_RS02530 PF04204 Homoserine O-succinyltransferase AM352_RS02535 PF13673 Acetyltransferase (GNAT) domain AM352_RS02560 PF02142 MGS-like domain AM352_RS02560 PF01808 AICARFT/IMPCHase bienzyme AM352_RS02565 PF02843 Phosphoribosylglycinamide synthetase, C domain AM352_RS02565 PF02844 Phosphoribosylglycinamide synthetase, N domain AM352_RS02565 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain AM352_RS02570 PF07356 Protein of unknown function (DUF1481) AM352_RS02575 PF00216 Bacterial DNA-binding protein AM352_RS02580 PF04222 Protein of unknown function (DUF416) AM352_RS02585 PF04493 Endonuclease V AM352_RS02590 PF01208 Uroporphyrinogen decarboxylase (URO-D) AM352_RS02595 PF09297 NADH pyrophosphatase zinc ribbon domain AM352_RS02595 PF00293 NUDIX domain AM352_RS02600 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ AM352_RS02605 PF01964 Radical SAM ThiC family AM352_RS02605 PF13667 ThiC-associated domain AM352_RS02610 PF02581 Thiamine monophosphate synthase AM352_RS02615 PF00899 ThiF family AM352_RS02620 PF02597 ThiS family AM352_RS02625 PF05690 Thiazole biosynthesis protein ThiG AM352_RS02630 PF06968 Biotin and Thiamin Synthesis associated domain AM352_RS02630 PF04055 Radical SAM superfamily AM352_RS02640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS02645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM352_RS02650 PF04997 RNA polymerase Rpb1, domain 1 AM352_RS02650 PF05000 RNA polymerase Rpb1, domain 4 AM352_RS02650 PF00623 RNA polymerase Rpb1, domain 2 AM352_RS02650 PF04983 RNA polymerase Rpb1, domain 3 AM352_RS02650 PF04998 RNA polymerase Rpb1, domain 5 AM352_RS02655 PF04560 RNA polymerase Rpb2, domain 7 AM352_RS02655 PF00562 RNA polymerase Rpb2, domain 6 AM352_RS02655 PF10385 RNA polymerase beta subunit external 1 domain AM352_RS02655 PF04565 RNA polymerase Rpb2, domain 3 AM352_RS02655 PF04561 RNA polymerase Rpb2, domain 2 AM352_RS02655 PF04563 RNA polymerase beta subunit AM352_RS02660 PF00542 Ribosomal protein L7/L12 C-terminal domain AM352_RS02660 PF16320 Ribosomal protein L7/L12 dimerisation domain AM352_RS02665 PF00466 Ribosomal protein L10 AM352_RS02675 PF00687 Ribosomal protein L1p/L10e family AM352_RS02680 PF03946 Ribosomal protein L11, N-terminal domain AM352_RS02680 PF00298 Ribosomal protein L11, RNA binding domain AM352_RS02685 PF02357 Transcription termination factor nusG AM352_RS02685 PF00467 KOW motif AM352_RS02690 PF00584 SecE/Sec61-gamma subunits of protein translocation complex AM352_RS02695 PF03144 Elongation factor Tu domain 2 AM352_RS02695 PF00009 Elongation factor Tu GTP binding domain AM352_RS02695 PF03143 Elongation factor Tu C-terminal domain AM352_RS02725 PF00485 Phosphoribulokinase / Uridine kinase family AM352_RS02730 PF03099 Biotin/lipoate A/B protein ligase family AM352_RS02730 PF08279 HTH domain AM352_RS02730 PF02237 Biotin protein ligase C terminal domain AM352_RS02735 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain AM352_RS02735 PF01565 FAD binding domain AM352_RS02765 PF01177 Asp/Glu/Hydantoin racemase AM352_RS02770 PF00593 TonB dependent receptor AM352_RS02770 PF07715 TonB-dependent Receptor Plug Domain AM352_RS02775 PF05958 tRNA (Uracil-5-)-methyltransferase AM352_RS02785 PF07226 Protein of unknown function (DUF1422) AM352_RS02790 PF00440 Bacterial regulatory proteins, tetR family AM352_RS02795 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM352_RS02795 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS02800 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS02800 PF03466 LysR substrate binding domain AM352_RS02805 PF14698 Argininosuccinate lyase C-terminal AM352_RS02805 PF00206 Lyase AM352_RS02810 PF00696 Amino acid kinase family AM352_RS02815 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM352_RS02815 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM352_RS02820 PF07687 Peptidase dimerisation domain AM352_RS02820 PF01546 Peptidase family M20/M25/M40 AM352_RS02825 PF00311 Phosphoenolpyruvate carboxylase AM352_RS02830 PF00884 Sulfatase AM352_RS02835 PF12833 Helix-turn-helix domain AM352_RS02840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS02845 PF04055 Radical SAM superfamily AM352_RS02850 PF02901 Pyruvate formate lyase-like AM352_RS02850 PF01228 Glycine radical AM352_RS02855 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS02865 PF05524 PEP-utilising enzyme, N-terminal AM352_RS02865 PF02896 PEP-utilising enzyme, TIM barrel domain AM352_RS02865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS02865 PF00391 PEP-utilising enzyme, mobile domain AM352_RS02865 PF00381 PTS HPr component phosphorylation site AM352_RS02870 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM352_RS02875 PF00465 Iron-containing alcohol dehydrogenase AM352_RS02880 PF00141 Peroxidase AM352_RS02885 PF02219 Methylenetetrahydrofolate reductase AM352_RS02890 PF03466 LysR substrate binding domain AM352_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS02900 PF03447 Homoserine dehydrogenase, NAD binding domain AM352_RS02900 PF00742 Homoserine dehydrogenase AM352_RS02900 PF00696 Amino acid kinase family AM352_RS02905 PF01053 Cys/Met metabolism PLP-dependent enzyme AM352_RS02910 PF01340 Met Apo-repressor, MetJ AM352_RS02915 PF01197 Ribosomal protein L31 AM352_RS02920 PF00271 Helicase conserved C-terminal domain AM352_RS02920 PF18074 Primosomal protein N C-terminal domain AM352_RS02920 PF18319 PriA DNA helicase Cys-rich region (CRR) domain AM352_RS02920 PF00270 DEAD/DEAH box helicase AM352_RS02920 PF17764 3′ DNA-binding domain (3′BD) AM352_RS02925 PF00356 Bacterial regulatory proteins, lacI family AM352_RS02930 PF05036 Sporulation related domain AM352_RS02935 PF00227 Proteasome subunit AM352_RS02940 PF10431 C-terminal, D2-small domain, of ClpB protein AM352_RS02940 PF07724 AAA domain (Cdc48 subfamily) AM352_RS02940 PF00004 ATPase family associated with various cellular activities (AAA) AM352_RS02945 PF01040 UbiA prenyltransferase family AM352_RS02950 PF03737 Aldolase/RraA AM352_RS02955 PF06005 Cell division protein ZapB AM352_RS02960 PF00230 Major intrinsic protein AM352_RS02965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS02965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS02970 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM352_RS02975 PF00970 Oxidoreductase FAD-binding domain AM352_RS02975 PF00175 Oxidoreductase NAD-binding domain AM352_RS02980 PF05656 Protein of unknown function (DUF805) AM352_RS02985 PF07305 Protein of unknown function (DUF1454) AM352_RS02990 PF00121 Triosephosphate isomerase AM352_RS03000 PF02611 CDP-diacylglycerol pyrophosphatase AM352_RS03010 PF00365 Phosphofructokinase AM352_RS03015 PF16916 Dimerisation domain of Zinc Transporter AM352_RS03015 PF01545 Cation efflux family AM352_RS03020 PF07813 LTXXQ motif family protein AM352_RS03025 PF00486 Transcriptional regulatory protein, C terminal AM352_RS03025 PF00072 Response regulator receiver domain AM352_RS03030 PF00672 HAMP domain AM352_RS03030 PF16527 Two-component sensor protein CpxA, periplasmic domain AM352_RS03030 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS03030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS03035 PF03475 3-alpha domain AM352_RS03035 PF03473 MOSC domain AM352_RS03040 PF00701 Dihydrodipicolinate synthetase family AM352_RS03045 PF03812 2-keto-3-deoxygluconate permease AM352_RS03050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM352_RS03050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM352_RS03055 PF06379 L-rhamnose-proton symport protein (RhaT) AM352_RS03060 PF02311 AraC-like ligand binding domain AM352_RS03060 PF12833 Helix-turn-helix domain AM352_RS03065 PF02311 AraC-like ligand binding domain AM352_RS03065 PF12833 Helix-turn-helix domain AM352_RS03070 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS03070 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS03075 PF06134 L-rhamnose isomerase (RhaA) AM352_RS03080 PF00596 Class II Aldolase and Adducin N-terminal domain AM352_RS03085 PF00465 Iron-containing alcohol dehydrogenase AM352_RS03090 PF05336 L-rhamnose mutarotase AM352_RS03100 PF03591 AzlC protein AM352_RS03115 PF02634 FdhD/NarQ family AM352_RS03125 PF13953 PapC C-terminal domain AM352_RS03125 PF13954 PapC N-terminal domain AM352_RS03125 PF00577 Outer membrane usher protein AM352_RS03130 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS03140 PF01568 Molydopterin dinucleotide binding domain AM352_RS03140 PF00384 Molybdopterin oxidoreductase AM352_RS03140 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS03145 PF01568 Molydopterin dinucleotide binding domain AM352_RS03145 PF00384 Molybdopterin oxidoreductase AM352_RS03145 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS03150 PF13247 4Fe-4S dicluster domain AM352_RS03150 PF09163 Formate dehydrogenase N, transmembrane AM352_RS03155 PF01292 Prokaryotic cytochrome b561 AM352_RS03160 PF04216 Protein involved in formate dehydrogenase formation AM352_RS03175 PF00583 Acetyltransferase (GNAT) family AM352_RS03175 PF09500 Putative thioesterase (yiiD_Cterm) AM352_RS03180 PF02580 D-Tyr-tRNA(Tyr) deacylase AM352_RS03185 PF03631 Virulence factor BrkB AM352_RS03190 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS03195 PF03797 Autotransporter beta-domain AM352_RS03200 PF00455 DeoR C terminal sensor domain AM352_RS03200 PF08220 DeoR-like helix-turn-helix domain AM352_RS03205 PF00294 pfkB family carbohydrate kinase AM352_RS03210 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM352_RS03210 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM352_RS03215 PF01791 DeoC/LacD family aldolase AM352_RS03225 PF01055 Glycosyl hydrolases family 31 AM352_RS03240 PF06178 Oligogalacturonate-specific porin protein (KdgM) AM352_RS03245 PF00009 Elongation factor Tu GTP binding domain AM352_RS03245 PF00679 Elongation factor G C-terminus AM352_RS03245 PF03144 Elongation factor Tu domain 2 AM352_RS03255 PF00120 Glutamine synthetase, catalytic domain AM352_RS03255 PF03951 Glutamine synthetase, beta-Grasp domain AM352_RS03260 PF00989 PAS fold AM352_RS03260 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS03260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS03265 PF00158 Sigma-54 interaction domain AM352_RS03265 PF02954 Bacterial regulatory protein, Fis family AM352_RS03265 PF00072 Response regulator receiver domain AM352_RS03275 PF06969 HemN C-terminal domain AM352_RS03275 PF04055 Radical SAM superfamily AM352_RS03280 PF04220 Der GTPase activator (YihI) AM352_RS03290 PF01926 50S ribosome-binding GTPase AM352_RS03295 PF00476 DNA polymerase family A AM352_RS03295 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM352_RS03295 PF01612 3'-5' exonuclease AM352_RS03295 PF01367 5'-3' exonuclease, C-terminal SAM fold AM352_RS03305 PF01553 Acyltransferase AM352_RS03310 PF01323 DSBA-like thioredoxin domain AM352_RS03315 PF01636 Phosphotransferase enzyme family AM352_RS03320 PF06288 Protein of unknown function (DUF1040) AM352_RS03325 PF12804 MobA-like NTP transferase domain AM352_RS03330 PF03205 Molybdopterin guanine dinucleotide synthesis protein B AM352_RS03360 PF12724 Flavodoxin domain AM352_RS03365 PF02386 Cation transport protein AM352_RS03370 PF01205 Uncharacterized protein family UPF0029 AM352_RS03370 PF09186 Domain of unknown function (DUF1949) AM352_RS03375 PF00557 Metallopeptidase family M24 AM352_RS03380 PF00378 Enoyl-CoA hydratase/isomerase AM352_RS03380 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM352_RS03380 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM352_RS03385 PF00108 Thiolase, N-terminal domain AM352_RS03385 PF02803 Thiolase, C-terminal domain AM352_RS03390 PF00175 Oxidoreductase NAD-binding domain AM352_RS03390 PF00970 Oxidoreductase FAD-binding domain AM352_RS03395 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM352_RS03400 PF02357 Transcription termination factor nusG AM352_RS03405 PF01026 TatD related DNase AM352_RS03410 PF00902 Sec-independent protein translocase protein (TatC) AM352_RS03420 PF02416 mttA/Hcf106 family AM352_RS03425 PF03109 ABC1 family AM352_RS03430 PF02036 SCP-2 sterol transfer family AM352_RS03435 PF01209 ubiE/COQ5 methyltransferase family AM352_RS03440 PF02646 RmuC family AM352_RS03445 PF01048 Phosphorylase superfamily AM352_RS03450 PF01738 Dienelactone hydrolase family AM352_RS03455 PF01717 Cobalamin-independent synthase, Catalytic domain AM352_RS03455 PF08267 Cobalamin-independent synthase, N-terminal domain AM352_RS03460 PF03466 LysR substrate binding domain AM352_RS03460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS03465 PF00892 EamA-like transporter family AM352_RS03480 PF01810 LysE type translocator AM352_RS03485 PF01810 LysE type translocator AM352_RS03490 PF00570 HRDC domain AM352_RS03490 PF00270 DEAD/DEAH box helicase AM352_RS03490 PF16124 RecQ zinc-binding AM352_RS03490 PF00271 Helicase conserved C-terminal domain AM352_RS03490 PF09382 RQC domain AM352_RS03495 PF02253 Phospholipase A1 AM352_RS03500 PF03061 Thioesterase superfamily AM352_RS03505 PF00892 EamA-like transporter family AM352_RS03510 PF01544 CorA-like Mg2+ transporter protein AM352_RS03515 PF00580 UvrD/REP helicase N-terminal domain AM352_RS03515 PF13361 UvrD-like helicase C-terminal domain AM352_RS03520 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS03525 PF02899 Phage integrase, N-terminal SAM-like domain AM352_RS03525 PF00589 Phage integrase family AM352_RS03530 PF04340 Protein of unknown function, DUF484 AM352_RS03535 PF01678 Diaminopimelate epimerase AM352_RS03540 PF13627 Prokaryotic lipoprotein-attachment site AM352_RS03545 PF01491 Frataxin-like domain AM352_RS03550 PF01295 Adenylate cyclase, class-I AM352_RS03550 PF12633 Adenylate cyclase NT domain AM352_RS03555 PF03900 Porphobilinogen deaminase, C-terminal domain AM352_RS03555 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain AM352_RS03560 PF02602 Uroporphyrinogen-III synthase HemD AM352_RS03565 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase AM352_RS03570 PF07219 HemY protein N-terminus AM352_RS03570 PF07719 Tetratricopeptide repeat AM352_RS03595 PF00324 Amino acid permease AM352_RS03600 PF03808 Glycosyl transferase WecB/TagA/CpsF family AM352_RS03605 PF06899 WzyE protein, O-antigen assembly polymerase AM352_RS03610 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 AM352_RS03615 PF01943 Polysaccharide biosynthesis protein AM352_RS03620 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM352_RS03630 PF00483 Nucleotidyl transferase AM352_RS03635 PF16363 GDP-mannose 4,6 dehydratase AM352_RS03640 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM352_RS03640 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM352_RS03640 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM352_RS03645 PF02350 UDP-N-acetylglucosamine 2-epimerase AM352_RS03650 PF02706 Chain length determinant protein AM352_RS03655 PF00953 Glycosyl transferase family 4 AM352_RS03665 PF07497 Rho termination factor, RNA-binding domain AM352_RS03665 PF07498 Rho termination factor, N-terminal domain AM352_RS03665 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM352_RS03670 PF00085 Thioredoxin AM352_RS03675 PF00271 Helicase conserved C-terminal domain AM352_RS03675 PF00270 DEAD/DEAH box helicase AM352_RS03680 PF02541 Ppx/GppA phosphatase family AM352_RS03685 PF00580 UvrD/REP helicase N-terminal domain AM352_RS03685 PF13361 UvrD-like helicase C-terminal domain AM352_RS03690 PF04973 Nicotinamide mononucleotide transporter AM352_RS03695 PF01048 Phosphorylase superfamily AM352_RS03710 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain AM352_RS03710 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain AM352_RS03715 PF03466 LysR substrate binding domain AM352_RS03715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS03720 PF00585 C-terminal regulatory domain of Threonine dehydratase AM352_RS03720 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS03725 PF00920 Dehydratase family AM352_RS03730 PF01063 Amino-transferase class IV AM352_RS03740 PF00205 Thiamine pyrophosphate enzyme, central domain AM352_RS03740 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS03740 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS03745 PF08046 IlvGEDA operon leader peptide AM352_RS03750 PF01078 Magnesium chelatase, subunit ChlI AM352_RS03750 PF13335 Magnesium chelatase, subunit ChlI C-terminal AM352_RS03755 PF04219 Protein of unknown function, DUF AM352_RS03760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS03760 PF03466 LysR substrate binding domain AM352_RS03795 PF07729 FCD domain AM352_RS03795 PF00392 Bacterial regulatory proteins, gntR family AM352_RS03800 PF07690 Major Facilitator Superfamily AM352_RS03805 PF00356 Bacterial regulatory proteins, lacI family AM352_RS03810 PF00294 pfkB family carbohydrate kinase AM352_RS03815 PF13407 Periplasmic binding protein domain AM352_RS03820 PF02653 Branched-chain amino acid transport system / permease component AM352_RS03825 PF00005 ABC transporter AM352_RS03830 PF05025 RbsD / FucU transport protein family AM352_RS03835 PF02705 K+ potassium transporter AM352_RS03845 PF07728 AAA domain (dynein-related subfamily) AM352_RS03845 PF17868 AAA lid domain AM352_RS03845 PF12592 Protein of unknown function (DUF3763) AM352_RS03850 PF05762 VWA domain containing CoxE-like protein AM352_RS03855 PF03590 Aspartate-ammonia ligase AM352_RS03860 PF01037 Lrp/AsnC ligand binding domain AM352_RS03865 PF00258 Flavodoxin AM352_RS03870 PF01134 Glucose inhibited division protein A AM352_RS03870 PF13932 GidA associated domain AM352_RS03875 PF02527 rRNA small subunit methyltransferase G AM352_RS03880 PF03899 ATP synthase I chain AM352_RS03885 PF00119 ATP synthase A chain AM352_RS03890 PF00137 ATP synthase subunit C AM352_RS03895 PF00430 ATP synthase B/B' CF(0) AM352_RS03900 PF00213 ATP synthase delta (OSCP) subunit AM352_RS03905 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM352_RS03905 PF00306 ATP synthase alpha/beta chain, C terminal domain AM352_RS03905 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM352_RS03910 PF00231 ATP synthase AM352_RS03915 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM352_RS03915 PF02874 ATP synthase alpha/beta family, beta-barrel domain AM352_RS03920 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain AM352_RS03920 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain AM352_RS03925 PF12804 MobA-like NTP transferase domain AM352_RS03925 PF14602 Hexapeptide repeat of succinyl-transferase AM352_RS03925 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS03930 PF01380 SIS domain AM352_RS03935 PF12849 PBP superfamily domain AM352_RS03940 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS03945 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS03950 PF00005 ABC transporter AM352_RS03955 PF01895 PhoU domain AM352_RS03960 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS03965 PF00860 Permease family AM352_RS03970 PF03358 NADPH-dependent FMN reductase AM352_RS03980 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS03980 PF03466 LysR substrate binding domain AM352_RS03985 PF07690 Major Facilitator Superfamily AM352_RS03995 PF10396 GTP-binding protein TrmE N-terminus AM352_RS03995 PF01926 50S ribosome-binding GTPase AM352_RS03995 PF12631 MnmE helical domain AM352_RS04000 PF02096 60Kd inner membrane protein AM352_RS04000 PF14849 YidC periplasmic domain AM352_RS04005 PF01809 Putative membrane protein insertion efficiency factor AM352_RS04010 PF00825 Ribonuclease P AM352_RS04015 PF00468 Ribosomal protein L34 AM352_RS04020 PF00308 Bacterial dnaA protein AM352_RS04020 PF11638 DnaA N-terminal domain AM352_RS04020 PF08299 Bacterial dnaA protein helix-turn-helix AM352_RS04025 PF00712 DNA polymerase III beta subunit, N-terminal domain AM352_RS04025 PF02768 DNA polymerase III beta subunit, C-terminal domain AM352_RS04025 PF02767 DNA polymerase III beta subunit, central domain AM352_RS04030 PF02463 RecF/RecN/SMC N terminal domain AM352_RS04035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS04035 PF18053 DNA gyrase B subunit insert domain AM352_RS04035 PF00986 DNA gyrase B subunit, carboxyl terminus AM352_RS04035 PF01751 Toprim domain AM352_RS04035 PF00204 DNA gyrase B AM352_RS04045 PF07729 FCD domain AM352_RS04045 PF00392 Bacterial regulatory proteins, gntR family AM352_RS04050 PF05035 2-keto-3-deoxy-galactonokinase AM352_RS04055 PF01081 KDPG and KHG aldolase AM352_RS04060 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM352_RS04060 PF13378 Enolase C-terminal domain-like AM352_RS04065 PF07690 Major Facilitator Superfamily AM352_RS04070 PF12566 Protein of unknown function (DUF3748) AM352_RS04070 PF07676 WD40-like Beta Propeller Repeat AM352_RS04075 PF07119 Protein of unknown function (DUF1375) AM352_RS04080 PF00011 Hsp20/alpha crystallin family AM352_RS04085 PF00011 Hsp20/alpha crystallin family AM352_RS04090 PF06826 Predicted Permease Membrane Region AM352_RS04090 PF02080 TrkA-C domain AM352_RS04095 PF00392 Bacterial regulatory proteins, gntR family AM352_RS04095 PF07702 UTRA domain AM352_RS04100 PF00367 phosphotransferase system, EIIB AM352_RS04100 PF02378 Phosphotransferase system, EIIC AM352_RS04105 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM352_RS04105 PF02056 Family 4 glycosyl hydrolase AM352_RS04110 PF12833 Helix-turn-helix domain AM352_RS04110 PF02311 AraC-like ligand binding domain AM352_RS04115 PF00474 Sodium:solute symporter family AM352_RS04120 PF16347 Domain of unknown function (DUF4976) AM352_RS04120 PF00884 Sulfatase AM352_RS04125 PF02656 Domain of unknown function (DUF202) AM352_RS04130 PF02656 Domain of unknown function (DUF202) AM352_RS04135 PF13186 Iron-sulfur cluster-binding domain AM352_RS04135 PF04055 Radical SAM superfamily AM352_RS04140 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS04145 PF02447 GntP family permease AM352_RS04150 PF03466 LysR substrate binding domain AM352_RS04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS04160 PF07690 Major Facilitator Superfamily AM352_RS04170 PF13939 Toxin TisB, type I toxin-antitoxin system AM352_RS04175 PF08049 IlvB leader peptide AM352_RS04180 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS04180 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS04180 PF00205 Thiamine pyrophosphate enzyme, central domain AM352_RS04185 PF01842 ACT domain AM352_RS04195 PF00196 Bacterial regulatory proteins, luxR family AM352_RS04195 PF00072 Response regulator receiver domain AM352_RS04200 PF07730 Histidine kinase AM352_RS04200 PF05231 MASE1 AM352_RS04200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS04205 PF07690 Major Facilitator Superfamily AM352_RS04210 PF07690 Major Facilitator Superfamily AM352_RS04215 PF01081 KDPG and KHG aldolase AM352_RS04220 PF05035 2-keto-3-deoxy-galactonokinase AM352_RS04225 PF07690 Major Facilitator Superfamily AM352_RS04230 PF08666 SAF domain AM352_RS04230 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM352_RS04235 PF00701 Dihydrodipicolinate synthetase family AM352_RS04240 PF09339 IclR helix-turn-helix domain AM352_RS04240 PF01614 Bacterial transcriptional regulator AM352_RS04245 PF06711 Protein of unknown function (DUF1198) AM352_RS04260 PF07690 Major Facilitator Superfamily AM352_RS04270 PF00874 PRD domain AM352_RS04270 PF00158 Sigma-54 interaction domain AM352_RS04280 PF03830 PTS system sorbose subfamily IIB component AM352_RS04280 PF03610 PTS system fructose IIA component AM352_RS04285 PF03609 PTS system sorbose-specific iic component AM352_RS04290 PF03613 PTS system mannose/fructose/sorbose family IID component AM352_RS04295 PF03841 L-seryl-tRNA selenium transferase AM352_RS04300 PF07071 KDGP aldolase AM352_RS04305 PF03180 NLPA lipoprotein AM352_RS04310 PF16970 Type-1 fimbrial protein, A AM352_RS04315 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS04315 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS04320 PF00577 Outer membrane usher protein AM352_RS04320 PF13953 PapC C-terminal domain AM352_RS04320 PF13954 PapC N-terminal domain AM352_RS04325 PF00419 Fimbrial protein AM352_RS04330 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS04330 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS04340 PF00892 EamA-like transporter family AM352_RS04345 PF02463 RecF/RecN/SMC N terminal domain AM352_RS04350 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS04350 PF00107 Zinc-binding dehydrogenase AM352_RS04355 PF03466 LysR substrate binding domain AM352_RS04355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS04360 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM352_RS04365 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM352_RS04370 PF04002 RadC-like JAB domain AM352_RS04375 PF06067 Domain of unknown function (DUF932) AM352_RS04410 PF09382 RQC domain AM352_RS04410 PF00570 HRDC domain AM352_RS04410 PF16124 RecQ zinc-binding AM352_RS04410 PF00271 Helicase conserved C-terminal domain AM352_RS04410 PF00270 DEAD/DEAH box helicase AM352_RS04435 PF14659 Phage integrase, N-terminal SAM-like domain AM352_RS04435 PF13356 Arm DNA-binding domain AM352_RS04435 PF00589 Phage integrase family AM352_RS04445 PF05170 AsmA family AM352_RS04450 PF00860 Permease family AM352_RS04455 PF00271 Helicase conserved C-terminal domain AM352_RS04455 PF00270 DEAD/DEAH box helicase AM352_RS04455 PF17191 RecG wedge domain AM352_RS04460 PF12105 SpoU, rRNA methylase, C-terminal AM352_RS04460 PF00588 SpoU rRNA Methylase family AM352_RS04465 PF02824 TGS domain AM352_RS04465 PF13291 ACT domain AM352_RS04465 PF04607 Region found in RelA / SpoT proteins AM352_RS04470 PF01192 RNA polymerase Rpb6 AM352_RS04475 PF00625 Guanylate kinase AM352_RS04480 PF03120 NAD-dependent DNA ligase OB-fold domain AM352_RS04480 PF01653 NAD-dependent DNA ligase adenylation domain AM352_RS04485 PF03458 UPF0126 domain AM352_RS04505 PF01381 Helix-turn-helix AM352_RS04540 PF03755 YicC-like family, N-terminal region AM352_RS04540 PF08340 Domain of unknown function (DUF1732) AM352_RS04550 PF03725 3' exoribonuclease family, domain 2 AM352_RS04550 PF01138 3' exoribonuclease family, domain 1 AM352_RS04555 PF00156 Phosphoribosyl transferase domain AM352_RS04560 PF00440 Bacterial regulatory proteins, tetR family AM352_RS04565 PF00692 dUTPase AM352_RS04570 PF04127 DNA / pantothenate metabolism flavoprotein AM352_RS04570 PF02441 Flavoprotein AM352_RS04575 PF04002 RadC-like JAB domain AM352_RS04580 PF00830 Ribosomal L28 family AM352_RS04585 PF00471 Ribosomal protein L33 AM352_RS04590 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM352_RS04590 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM352_RS04590 PF06827 Zinc finger found in FPG and IleRS AM352_RS04595 PF01467 Cytidylyltransferase-like AM352_RS04600 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) AM352_RS04605 PF13439 Glycosyltransferase Family 4 AM352_RS04605 PF00534 Glycosyl transferases group 1 AM352_RS04615 PF01501 Glycosyl transferase family 8 AM352_RS04615 PF08437 Glycosyl transferase family 8 C-terminal AM352_RS04620 PF08437 Glycosyl transferase family 8 C-terminal AM352_RS04620 PF01501 Glycosyl transferase family 8 AM352_RS04630 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM352_RS04635 PF00535 Glycosyl transferase family 2 AM352_RS04640 PF04932 O-Antigen ligase AM352_RS04645 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM352_RS04650 PF01075 Glycosyltransferase family 9 (heptosyltransferase) AM352_RS04655 PF01370 NAD dependent epimerase/dehydratase family AM352_RS04660 PF00155 Aminotransferase class I and II AM352_RS04665 PF00107 Zinc-binding dehydrogenase AM352_RS04665 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS04675 PF00535 Glycosyl transferase family 2 AM352_RS04680 PF04748 Divergent polysaccharide deacetylase AM352_RS04685 PF01551 Peptidase family M23 AM352_RS04690 PF01676 Metalloenzyme superfamily AM352_RS04690 PF06415 BPG-independent PGAM N-terminus (iPGM_N) AM352_RS04695 PF00581 Rhodanese-like domain AM352_RS04700 PF00462 Glutaredoxin AM352_RS04705 PF02556 Preprotein translocase subunit SecB AM352_RS04710 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus AM352_RS04710 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus AM352_RS04715 PF06426 Serine acetyltransferase, N-terminal AM352_RS04715 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS04720 PF00588 SpoU rRNA Methylase family AM352_RS04725 PF01070 FMN-dependent dehydrogenase AM352_RS04730 PF00392 Bacterial regulatory proteins, gntR family AM352_RS04730 PF07729 FCD domain AM352_RS04735 PF02652 L-lactate permease AM352_RS04740 PF10928 Protein of unknown function (DUF2810) AM352_RS04750 PF05068 Mannitol repressor AM352_RS04755 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS04755 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS04765 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS04765 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS04765 PF02378 Phosphotransferase system, EIIC AM352_RS04770 PF11742 Protein of unknown function (DUF3302) AM352_RS04775 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS04775 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS04780 PF00043 Glutathione S-transferase, C-terminal domain AM352_RS04780 PF13417 Glutathione S-transferase, N-terminal domain AM352_RS04785 PF12390 Selenocysteine synthase N terminal AM352_RS04785 PF03841 L-seryl-tRNA selenium transferase AM352_RS04790 PF09107 Elongation factor SelB, winged helix AM352_RS04790 PF09106 Elongation factor SelB, winged helix AM352_RS04790 PF03144 Elongation factor Tu domain 2 AM352_RS04790 PF00009 Elongation factor Tu GTP binding domain AM352_RS04795 PF00465 Iron-containing alcohol dehydrogenase AM352_RS04800 PF00171 Aldehyde dehydrogenase family AM352_RS04810 PF00596 Class II Aldolase and Adducin N-terminal domain AM352_RS04815 PF01261 Xylose isomerase-like TIM barrel AM352_RS04820 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM352_RS04825 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS04825 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS04830 PF07690 Major Facilitator Superfamily AM352_RS04835 PF16154 Domain of unknown function (DUF4862) AM352_RS04840 PF04074 YhcH/YjgK/YiaL AM352_RS04845 PF02615 Malate/L-lactate dehydrogenase AM352_RS04850 PF01614 Bacterial transcriptional regulator AM352_RS04850 PF09339 IclR helix-turn-helix domain AM352_RS04855 PF13247 4Fe-4S dicluster domain AM352_RS04860 PF00155 Aminotransferase class I and II AM352_RS04865 PF00128 Alpha amylase, catalytic domain AM352_RS04875 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM352_RS04880 PF12833 Helix-turn-helix domain AM352_RS04885 PF02653 Branched-chain amino acid transport system / permease component AM352_RS04890 PF00005 ABC transporter AM352_RS04895 PF13407 Periplasmic binding protein domain AM352_RS04905 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS04905 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS04915 PF01757 Acyltransferase family AM352_RS04920 PF13983 YsaB-like lipoprotein AM352_RS04925 PF02091 Glycyl-tRNA synthetase alpha subunit AM352_RS04930 PF05746 DALR anticodon binding domain AM352_RS04930 PF02092 Glycyl-tRNA synthetase beta subunit AM352_RS04935 PF00313 'Cold-shock' DNA-binding domain AM352_RS04940 PF01381 Helix-turn-helix AM352_RS04945 PF11254 Protein of unknown function (DUF3053) AM352_RS04950 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM352_RS04950 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM352_RS04955 PF07690 Major Facilitator Superfamily AM352_RS04960 PF00294 pfkB family carbohydrate kinase AM352_RS04970 PF00356 Bacterial regulatory proteins, lacI family AM352_RS04975 PF13488 Glycine zipper AM352_RS04975 PF00691 OmpA family AM352_RS04980 PF01568 Molydopterin dinucleotide binding domain AM352_RS04980 PF18364 Molybdopterin oxidoreductase N-terminal domain AM352_RS04980 PF00384 Molybdopterin oxidoreductase AM352_RS04985 PF00583 Acetyltransferase (GNAT) family AM352_RS04990 PF03352 Methyladenine glycosylase AM352_RS04995 PF03797 Autotransporter beta-domain AM352_RS05000 PF07690 Major Facilitator Superfamily AM352_RS05005 PF00884 Sulfatase AM352_RS05005 PF08019 Phosphoethanolamine transferase EptA/EptB AM352_RS05025 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS05030 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS05035 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS05035 PF12911 N-terminal TM domain of oligopeptide transport permease C AM352_RS05040 PF00005 ABC transporter AM352_RS05040 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS05045 PF00005 ABC transporter AM352_RS05045 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS05050 PF00158 Sigma-54 interaction domain AM352_RS05050 PF00072 Response regulator receiver domain AM352_RS05050 PF02954 Bacterial regulatory protein, Fis family AM352_RS05055 PF03222 Tryptophan/tyrosine permease family AM352_RS05060 PF01053 Cys/Met metabolism PLP-dependent enzyme AM352_RS05065 PF11658 Cellulose biosynthesis protein BcsG AM352_RS05070 PF11120 Cellulose biosynthesis protein BcsF AM352_RS05075 PF10995 Cellulose biosynthesis GIL AM352_RS05080 PF10945 Cellulose biosynthesis protein BcsR AM352_RS05085 PF06564 Cellulose biosynthesis protein BcsQ AM352_RS05090 PF07238 PilZ domain AM352_RS05090 PF00535 Glycosyl transferase family 2 AM352_RS05095 PF03170 Bacterial cellulose synthase subunit AM352_RS05100 PF01270 Glycosyl hydrolases family 8 AM352_RS05105 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) AM352_RS05110 PF00672 HAMP domain AM352_RS05110 PF17154 Gammaproteobacterial periplasmic sensor domain AM352_RS05110 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS05110 PF00563 EAL domain AM352_RS05120 PF00375 Sodium:dicarboxylate symporter family AM352_RS05130 PF00675 Insulinase (Peptidase family M16) AM352_RS05130 PF05193 Peptidase M16 inactive domain AM352_RS05140 PF00294 pfkB family carbohydrate kinase AM352_RS05145 PF00563 EAL domain AM352_RS05150 PF05170 AsmA family AM352_RS05155 PF00083 Sugar (and other) transporter AM352_RS05155 PF07690 Major Facilitator Superfamily AM352_RS05160 PF03631 Virulence factor BrkB AM352_RS05165 PF03466 LysR substrate binding domain AM352_RS05165 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS05180 PF01204 Trehalase AM352_RS05185 PF14376 Haem-binding domain AM352_RS05185 PF00034 Cytochrome c AM352_RS05185 PF03150 Di-haem cytochrome c peroxidase AM352_RS05190 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS05190 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM352_RS05195 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ AM352_RS05200 PF01432 Peptidase family M3 AM352_RS05205 PF04445 Putative SAM-dependent methyltransferase AM352_RS05210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS05215 PF02082 Transcriptional regulator AM352_RS05225 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system AM352_RS05230 PF00854 POT family AM352_RS05235 PF00582 Universal stress protein family AM352_RS05245 PF10625 Universal stress protein B (UspB) AM352_RS05250 PF01384 Phosphate transporter family AM352_RS05260 PF03448 MgtE intracellular N domain AM352_RS05260 PF01769 Divalent cation transporter AM352_RS05260 PF00571 CBS domain AM352_RS05265 PF13533 Biotin-lipoyl like AM352_RS05270 PF00005 ABC transporter AM352_RS05280 PF08753 NikR C terminal nickel binding domain AM352_RS05280 PF01402 Ribbon-helix-helix protein, copG family AM352_RS05285 PF00005 ABC transporter AM352_RS05290 PF00005 ABC transporter AM352_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS05305 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS05315 PF01648 4'-phosphopantetheinyl transferase superfamily AM352_RS05320 PF02801 Beta-ketoacyl synthase, C-terminal domain AM352_RS05320 PF00109 Beta-ketoacyl synthase, N-terminal domain AM352_RS05335 PF02801 Beta-ketoacyl synthase, C-terminal domain AM352_RS05335 PF00109 Beta-ketoacyl synthase, N-terminal domain AM352_RS05360 PF00535 Glycosyl transferase family 2 AM352_RS05370 PF13193 AMP-binding enzyme C-terminal domain AM352_RS05370 PF00501 AMP-binding enzyme AM352_RS05380 PF00550 Phosphopantetheine attachment site AM352_RS05385 PF00550 Phosphopantetheine attachment site AM352_RS05390 PF01553 Acyltransferase AM352_RS05410 PF01594 AI-2E family transporter AM352_RS05415 PF07690 Major Facilitator Superfamily AM352_RS05420 PF08786 DcrB AM352_RS05425 PF02592 Putative vitamin uptake transporter AM352_RS05430 PF01206 Sulfurtransferase TusA AM352_RS05435 PF03480 Bacterial extracellular solute-binding protein, family 7 AM352_RS05440 PF00403 Heavy-metal-associated domain AM352_RS05445 PF07947 YhhN family AM352_RS05450 PF10694 Protein of unknown function (DUF2500) AM352_RS05455 PF06611 Protein of unknown function (DUF1145) AM352_RS05465 PF00448 SRP54-type protein, GTPase domain AM352_RS05465 PF02881 SRP54-type protein, helical bundle domain AM352_RS05470 PF00005 ABC transporter AM352_RS05475 PF18075 FtsX extracellular domain AM352_RS05475 PF02687 FtsX-like permease family AM352_RS05480 PF04542 Sigma-70 region 2 AM352_RS05480 PF04545 Sigma-70, region 4 AM352_RS05485 PF00202 Aminotransferase class-III AM352_RS05490 PF13458 Periplasmic binding protein AM352_RS05495 PF12568 Acetyltransferase (GNAT) domain, PanZ AM352_RS05500 PF13458 Periplasmic binding protein AM352_RS05505 PF02653 Branched-chain amino acid transport system / permease component AM352_RS05510 PF11862 Domain of unknown function (DUF3382) AM352_RS05510 PF02653 Branched-chain amino acid transport system / permease component AM352_RS05515 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM352_RS05515 PF00005 ABC transporter AM352_RS05520 PF00005 ABC transporter AM352_RS05525 PF13416 Bacterial extracellular solute-binding protein AM352_RS05530 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS05535 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS05540 PF17912 MalK OB fold domain AM352_RS05540 PF00005 ABC transporter AM352_RS05545 PF03009 Glycerophosphoryl diester phosphodiesterase family AM352_RS05550 PF10956 Protein of unknown function (DUF2756) AM352_RS05575 PF05638 Type VI secretion system effector, Hcp AM352_RS05580 PF00583 Acetyltransferase (GNAT) family AM352_RS05585 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM352_RS05585 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM352_RS05590 PF17954 Quercetinase C-terminal cupin domain AM352_RS05590 PF02678 Pirin AM352_RS05595 PF00356 Bacterial regulatory proteins, lacI family AM352_RS05595 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM352_RS05600 PF01202 Shikimate kinase AM352_RS05605 PF02447 GntP family permease AM352_RS05615 PF01914 MarC family integral membrane protein AM352_RS05620 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM352_RS05620 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM352_RS05625 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM352_RS05625 PF02806 Alpha amylase, C-terminal all-beta domain AM352_RS05625 PF00128 Alpha amylase, catalytic domain AM352_RS05630 PF00128 Alpha amylase, catalytic domain AM352_RS05630 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) AM352_RS05630 PF18390 Glycogen debranching enzyme C-terminal domain AM352_RS05635 PF00483 Nucleotidyl transferase AM352_RS05640 PF08323 Starch synthase catalytic domain AM352_RS05640 PF00534 Glycosyl transferases group 1 AM352_RS05645 PF00343 Carbohydrate phosphorylase AM352_RS05650 PF01266 FAD dependent oxidoreductase AM352_RS05650 PF16901 C-terminal domain of alpha-glycerophosphate oxidase AM352_RS05655 PF00581 Rhodanese-like domain AM352_RS05660 PF01694 Rhomboid family AM352_RS05660 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease AM352_RS05665 PF00455 DeoR C terminal sensor domain AM352_RS05665 PF08220 DeoR-like helix-turn-helix domain AM352_RS05670 PF17874 MalT-like TPR region AM352_RS05670 PF00196 Bacterial regulatory proteins, luxR family AM352_RS05675 PF00343 Carbohydrate phosphorylase AM352_RS05680 PF02446 4-alpha-glucanotransferase AM352_RS05685 PF02447 GntP family permease AM352_RS05690 PF01106 NifU-like domain AM352_RS05690 PF01521 Iron-sulphur cluster biosynthesis AM352_RS05695 PF00156 Phosphoribosyl transferase domain AM352_RS05700 PF00561 alpha/beta hydrolase fold AM352_RS05705 PF09012 FeoC like transcriptional regulator AM352_RS05710 PF07664 Ferrous iron transport protein B C terminus AM352_RS05710 PF07670 Nucleoside recognition AM352_RS05710 PF02421 Ferrous iron transport protein B AM352_RS05710 PF17910 FeoB cytosolic helical domain AM352_RS05715 PF04023 FeoA domain AM352_RS05725 PF09371 Tex-like protein N-terminal domain AM352_RS05725 PF00575 S1 RNA binding domain AM352_RS05725 PF17674 HHH domain AM352_RS05725 PF16921 Tex protein YqgF-like domain AM352_RS05730 PF03449 Transcription elongation factor, N-terminal AM352_RS05730 PF01272 Transcription elongation factor, GreA/GreB, C-term AM352_RS05740 PF00486 Transcriptional regulatory protein, C terminal AM352_RS05740 PF00072 Response regulator receiver domain AM352_RS05745 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS05745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS05745 PF00672 HAMP domain AM352_RS05755 PF01293 Phosphoenolpyruvate carboxykinase AM352_RS05760 PF01430 Hsp33 protein AM352_RS05765 PF01479 S4 domain AM352_RS05770 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS05775 PF07095 Intracellular growth attenuator protein IgaA AM352_RS05780 PF00293 NUDIX domain AM352_RS05785 PF17092 Penicillin-binding protein OB-like domain AM352_RS05785 PF00905 Penicillin binding protein transpeptidase domain AM352_RS05785 PF00912 Transglycosylase AM352_RS05795 PF05137 Fimbrial assembly protein (PilN) AM352_RS05805 PF00263 Bacterial type II and III secretion system protein AM352_RS05805 PF03958 Bacterial type II/III secretion system short domain AM352_RS05815 PF01202 Shikimate kinase AM352_RS05820 PF01761 3-dehydroquinate synthase AM352_RS05825 PF05036 Sporulation related domain AM352_RS05830 PF02086 D12 class N6 adenine-specific DNA methyltransferase AM352_RS05835 PF00834 Ribulose-phosphate 3 epimerase family AM352_RS05840 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS05845 PF00579 tRNA synthetases class I (W and Y) AM352_RS05850 PF14502 Helix-turn-helix domain AM352_RS05850 PF14503 YhfZ C-terminal domain AM352_RS05860 PF01168 Alanine racemase, N-terminal domain AM352_RS05865 PF01676 Metalloenzyme superfamily AM352_RS05870 PF02126 Phosphotriesterase family AM352_RS05875 PF10941 Protein of unknown function DUF2620 AM352_RS05880 PF10797 Protein of unknown function AM352_RS05890 PF13978 Protein of unknown function (DUF4223) AM352_RS05900 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM352_RS05900 PF14824 Sirohaem biosynthesis protein central AM352_RS05900 PF10414 Sirohaem synthase dimerisation region AM352_RS05905 PF01226 Formate/nitrite transporter AM352_RS05910 PF13806 Rieske-like [2Fe-2S] domain AM352_RS05915 PF04324 BFD-like [2Fe-2S] binding domain AM352_RS05915 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM352_RS05915 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS05915 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM352_RS05915 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM352_RS05920 PF07690 Major Facilitator Superfamily AM352_RS05925 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM352_RS05930 PF10832 Protein of unknown function (DUF2559) AM352_RS05935 PF02661 Fic/DOC family AM352_RS05940 PF00117 Glutamine amidotransferase class-I AM352_RS05945 PF00202 Aminotransferase class-III AM352_RS05950 PF12805 FUSC-like inner membrane protein yccS AM352_RS05955 PF00027 Cyclic nucleotide-binding domain AM352_RS05955 PF13545 Crp-like helix-turn-helix domain AM352_RS05970 PF02566 OsmC-like protein AM352_RS05975 PF00485 Phosphoribulokinase / Uridine kinase family AM352_RS05980 PF06794 Uncharacterised protein family (UPF0270) AM352_RS05985 PF00561 alpha/beta hydrolase fold AM352_RS05990 PF16957 Malonate decarboxylase, alpha subunit, transporter AM352_RS05995 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM352_RS06000 PF06857 Malonate decarboxylase delta subunit (MdcD) AM352_RS06005 PF01039 Carboxyl transferase domain AM352_RS06015 PF03547 Membrane transport protein AM352_RS06020 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG AM352_RS06025 PF00698 Acyl transferase domain AM352_RS06030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS06030 PF03466 LysR substrate binding domain AM352_RS06035 PF00005 ABC transporter AM352_RS06035 PF12848 ABC transporter AM352_RS06040 PF02525 Flavodoxin-like fold AM352_RS06045 PF02254 TrkA-N domain AM352_RS06045 PF00999 Sodium/hydrogen exchanger family AM352_RS06050 PF09526 Probable metal-binding protein (DUF2387) AM352_RS06055 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM352_RS06060 PF04102 SlyX AM352_RS06065 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM352_RS06065 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase AM352_RS06070 PF13309 HTH domain AM352_RS06070 PF08348 YheO-like PAS domain AM352_RS06075 PF02635 DsrE/DsrF-like family AM352_RS06080 PF02635 DsrE/DsrF-like family AM352_RS06085 PF04077 DsrH like protein AM352_RS06090 PF00164 Ribosomal protein S12/S23 AM352_RS06095 PF00177 Ribosomal protein S7p/S5e AM352_RS06100 PF03144 Elongation factor Tu domain 2 AM352_RS06100 PF00009 Elongation factor Tu GTP binding domain AM352_RS06100 PF03764 Elongation factor G, domain IV AM352_RS06100 PF14492 Elongation Factor G, domain II AM352_RS06100 PF00679 Elongation factor G C-terminus AM352_RS06105 PF03143 Elongation factor Tu C-terminal domain AM352_RS06105 PF03144 Elongation factor Tu domain 2 AM352_RS06105 PF00009 Elongation factor Tu GTP binding domain AM352_RS06115 PF04324 BFD-like [2Fe-2S] binding domain AM352_RS06120 PF00210 Ferritin-like domain AM352_RS06125 PF01478 Type IV leader peptidase family AM352_RS06130 PF00338 Ribosomal protein S10p/S20e AM352_RS06135 PF00297 Ribosomal protein L3 AM352_RS06140 PF00573 Ribosomal protein L4/L1 family AM352_RS06145 PF00276 Ribosomal protein L23 AM352_RS06150 PF00181 Ribosomal Proteins L2, RNA binding domain AM352_RS06150 PF03947 Ribosomal Proteins L2, C-terminal domain AM352_RS06155 PF00203 Ribosomal protein S19 AM352_RS06160 PF00237 Ribosomal protein L22p/L17e AM352_RS06165 PF07650 KH domain AM352_RS06165 PF00189 Ribosomal protein S3, C-terminal domain AM352_RS06170 PF00252 Ribosomal protein L16p/L10e AM352_RS06175 PF00831 Ribosomal L29 protein AM352_RS06180 PF00366 Ribosomal protein S17 AM352_RS06185 PF00238 Ribosomal protein L14p/L23e AM352_RS06190 PF00467 KOW motif AM352_RS06190 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 AM352_RS06195 PF00673 ribosomal L5P family C-terminus AM352_RS06195 PF00281 Ribosomal protein L5 AM352_RS06200 PF00253 Ribosomal protein S14p/S29e AM352_RS06205 PF00410 Ribosomal protein S8 AM352_RS06210 PF00347 Ribosomal protein L6 AM352_RS06215 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast AM352_RS06220 PF03719 Ribosomal protein S5, C-terminal domain AM352_RS06220 PF00333 Ribosomal protein S5, N-terminal domain AM352_RS06225 PF00327 Ribosomal protein L30p/L7e AM352_RS06230 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A AM352_RS06235 PF00344 SecY translocase AM352_RS06240 PF00444 Ribosomal protein L36 AM352_RS06245 PF00416 Ribosomal protein S13/S18 AM352_RS06250 PF00411 Ribosomal protein S11 AM352_RS06255 PF01479 S4 domain AM352_RS06255 PF00163 Ribosomal protein S4/S9 N-terminal domain AM352_RS06260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain AM352_RS06260 PF01000 RNA polymerase Rpb3/RpoA insert domain AM352_RS06260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain AM352_RS06265 PF01196 Ribosomal protein L17 AM352_RS06270 PF09350 Domain of unknown function (DUF1992) AM352_RS06275 PF13411 MerR HTH family regulatory protein AM352_RS06280 PF03889 Alternative ribosome-rescue factor A AM352_RS06285 PF01741 Large-conductance mechanosensitive channel, MscL AM352_RS06290 PF02254 TrkA-N domain AM352_RS06290 PF02080 TrkA-C domain AM352_RS06295 PF01189 16S rRNA methyltransferase RsmB/F AM352_RS06295 PF01029 NusB family AM352_RS06300 PF00551 Formyl transferase AM352_RS06300 PF02911 Formyl transferase, C-terminal domain AM352_RS06305 PF01327 Polypeptide deformylase AM352_RS06310 PF17782 DprA winged helix domain AM352_RS06310 PF02481 DNA recombination-mediator protein A AM352_RS06315 PF04361 Protein of unknown function (DUF494) AM352_RS06320 PF01396 Topoisomerase DNA binding C4 zinc finger AM352_RS06325 PF01300 Telomere recombination AM352_RS06330 PF01488 Shikimate / quinate 5-dehydrogenase AM352_RS06330 PF08501 Shikimate dehydrogenase substrate binding domain AM352_RS06330 PF18317 Shikimate 5'-dehydrogenase C-terminal domain AM352_RS06335 PF07369 Protein of unknown function (DUF1488) AM352_RS06340 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS06380 PF00005 ABC transporter AM352_RS06385 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS06395 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS06405 PF00873 AcrB/AcrD/AcrF family AM352_RS06410 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS06410 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS06415 PF00440 Bacterial regulatory proteins, tetR family AM352_RS06415 PF08361 MAATS-type transcriptional repressor, C-terminal region AM352_RS06420 PF10831 Protein of unknown function (DUF2556) AM352_RS06425 PF01555 DNA methylase AM352_RS06430 PF02954 Bacterial regulatory protein, Fis family AM352_RS06435 PF01207 Dihydrouridine synthase (Dus) AM352_RS06440 PF00194 Eukaryotic-type carbonic anhydrase AM352_RS06450 PF00474 Sodium:solute symporter family AM352_RS06455 PF06196 Protein of unknown function (DUF997) AM352_RS06460 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain AM352_RS06460 PF02785 Biotin carboxylase C-terminal domain AM352_RS06460 PF00289 Biotin carboxylase, N-terminal domain AM352_RS06465 PF00364 Biotin-requiring enzyme AM352_RS06475 PF01220 Dehydroquinase class II AM352_RS06480 PF01794 Ferric reductase like transmembrane component AM352_RS06485 PF00174 Oxidoreductase molybdopterin binding domain AM352_RS06490 PF00107 Zinc-binding dehydrogenase AM352_RS06490 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS06495 PF17157 Gammaproteobacterial periplasmic sensor domain AM352_RS06495 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS06495 PF00563 EAL domain AM352_RS06510 PF04085 rod shape-determining protein MreC AM352_RS06515 PF04093 rod shape-determining protein MreD AM352_RS06520 PF02545 Maf-like protein AM352_RS06525 PF10150 Ribonuclease E/G family AM352_RS06525 PF00575 S1 RNA binding domain AM352_RS06530 PF13502 AsmA-like C-terminal region AM352_RS06530 PF13116 Protein of unknown function AM352_RS06535 PF01523 Putative modulator of DNA gyrase AM352_RS06540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS06540 PF03466 LysR substrate binding domain AM352_RS06545 PF07869 Protein of unknown function (DUF1656) AM352_RS06550 PF13533 Biotin-lipoyl like AM352_RS06555 PF04632 Fusaric acid resistance protein family AM352_RS06560 PF00171 Aldehyde dehydrogenase family AM352_RS06565 PF01337 Barstar (barnase inhibitor) AM352_RS06570 PF07338 Protein of unknown function (DUF1471) AM352_RS06575 PF01316 Arginine repressor, DNA binding domain AM352_RS06575 PF02863 Arginine repressor, C-terminal domain AM352_RS06580 PF00056 lactate/malate dehydrogenase, NAD binding domain AM352_RS06580 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM352_RS06585 PF13180 PDZ domain AM352_RS06590 PF00595 PDZ domain AM352_RS06590 PF13180 PDZ domain AM352_RS06595 PF06295 Protein of unknown function (DUF1043) AM352_RS06600 PF03969 AFG1-like ATPase AM352_RS06610 PF00572 Ribosomal protein L13 AM352_RS06615 PF00380 Ribosomal protein S9/S16 AM352_RS06625 PF00043 Glutathione S-transferase, C-terminal domain AM352_RS06625 PF02798 Glutathione S-transferase, N-terminal domain AM352_RS06630 PF04386 Stringent starvation protein B AM352_RS06635 PF00392 Bacterial regulatory proteins, gntR family AM352_RS06635 PF07729 FCD domain AM352_RS06640 PF00701 Dihydrodipicolinate synthetase family AM352_RS06645 PF07690 Major Facilitator Superfamily AM352_RS06650 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase AM352_RS06655 PF00480 ROK family AM352_RS06660 PF04074 YhcH/YjgK/YiaL AM352_RS06665 PF17761 DUF1016 N-terminal domain AM352_RS06665 PF06250 YhcG PDDEXK nuclease domain AM352_RS06670 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM352_RS06670 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS06675 PF00310 Glutamine amidotransferases class-II AM352_RS06675 PF01645 Conserved region in glutamate synthase AM352_RS06675 PF01493 GXGXG motif AM352_RS06675 PF04898 Glutamate synthase central domain AM352_RS06690 PF16199 Radical_SAM C-terminal domain AM352_RS06690 PF04055 Radical SAM superfamily AM352_RS06695 PF00072 Response regulator receiver domain AM352_RS06695 PF00989 PAS fold AM352_RS06695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS06695 PF01627 Hpt domain AM352_RS06695 PF18415 Histidine kinase receptor ArcB trans-membrane domain AM352_RS06695 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS06705 PF00912 Transglycosylase AM352_RS06710 PF10707 PhoP regulatory network protein YrbL AM352_RS06715 PF00381 PTS HPr component phosphorylation site AM352_RS06720 PF03668 P-loop ATPase protein family AM352_RS06725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS06730 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM352_RS06735 PF00309 Sigma-54 factor, Activator interacting domain (AID) AM352_RS06735 PF04552 Sigma-54, DNA binding domain AM352_RS06735 PF04963 Sigma-54 factor, core binding domain AM352_RS06740 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM352_RS06740 PF00005 ABC transporter AM352_RS06745 PF03968 OstA-like protein AM352_RS06750 PF06835 Lipopolysaccharide-assembly, LptC-related AM352_RS06760 PF00571 CBS domain AM352_RS06760 PF01380 SIS domain AM352_RS06765 PF01699 Sodium/calcium exchanger protein AM352_RS06770 PF00005 ABC transporter AM352_RS06775 PF02405 Permease MlaE AM352_RS06780 PF02470 MlaD protein AM352_RS06785 PF05494 MlaC protein AM352_RS06790 PF13466 STAS domain AM352_RS06795 PF01722 BolA-like protein AM352_RS06800 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM352_RS06805 PF13693 Winged helix-turn-helix DNA-binding AM352_RS06810 PF00348 Polyprenyl synthetase AM352_RS06815 PF00829 Ribosomal prokaryotic L21 protein AM352_RS06820 PF01016 Ribosomal L27 protein AM352_RS06825 PF00892 EamA-like transporter family AM352_RS06830 PF01018 GTP1/OBG AM352_RS06830 PF01926 50S ribosome-binding GTPase AM352_RS06835 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family AM352_RS06840 PF01272 Transcription elongation factor, GreA/GreB, C-term AM352_RS06840 PF03449 Transcription elongation factor, N-terminal AM352_RS06845 PF01985 CRS1 / YhbY (CRM) domain AM352_RS06850 PF01728 FtsJ-like methyltransferase AM352_RS06855 PF17862 AAA+ lid domain AM352_RS06855 PF06480 FtsH Extracellular AM352_RS06855 PF01434 Peptidase family M41 AM352_RS06855 PF00004 ATPase family associated with various cellular activities (AAA) AM352_RS06860 PF00809 Pterin binding enzyme AM352_RS06865 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM352_RS06865 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM352_RS06865 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM352_RS06865 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM352_RS06870 PF03840 Preprotein translocase SecG subunit AM352_RS06880 PF00764 Arginosuccinate synthase AM352_RS06890 PF17384 RimP C-terminal SH3 domain AM352_RS06890 PF02576 RimP N-terminal domain AM352_RS06895 PF00575 S1 RNA binding domain AM352_RS06895 PF08529 NusA N-terminal domain AM352_RS06895 PF13184 NusA-like KH domain AM352_RS06900 PF11987 Translation-initiation factor 2 AM352_RS06900 PF03144 Elongation factor Tu domain 2 AM352_RS06900 PF00009 Elongation factor Tu GTP binding domain AM352_RS06900 PF04760 Translation initiation factor IF-2, N-terminal region AM352_RS06900 PF08364 Bacterial translation initiation factor IF-2 associated region AM352_RS06905 PF02033 Ribosome-binding factor A AM352_RS06910 PF01509 TruB family pseudouridylate synthase (N terminal domain) AM352_RS06910 PF16198 tRNA pseudouridylate synthase B C-terminal domain AM352_RS06910 PF09157 Pseudouridine synthase II TruB, C-terminal AM352_RS06915 PF00312 Ribosomal protein S15 AM352_RS06920 PF00575 S1 RNA binding domain AM352_RS06920 PF03725 3' exoribonuclease family, domain 2 AM352_RS06920 PF01138 3' exoribonuclease family, domain 1 AM352_RS06920 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain AM352_RS06920 PF00013 KH domain AM352_RS06925 PF13181 Tetratricopeptide repeat AM352_RS06925 PF07719 Tetratricopeptide repeat AM352_RS06930 PF03880 DbpA RNA binding domain AM352_RS06930 PF00270 DEAD/DEAH box helicase AM352_RS06930 PF00271 Helicase conserved C-terminal domain AM352_RS06930 PF12343 Cold shock protein DEAD box A AM352_RS06935 PF03222 Tryptophan/tyrosine permease family AM352_RS06940 PF00296 Luciferase-like monooxygenase AM352_RS06945 PF01136 Peptidase family U32 AM352_RS06950 PF01136 Peptidase family U32 AM352_RS06955 PF02036 SCP-2 sterol transfer family AM352_RS06960 PF13508 Acetyltransferase (GNAT) domain AM352_RS06965 PF01541 GIY-YIG catalytic domain AM352_RS06975 PF13460 NAD(P)H-binding AM352_RS06980 PF03773 Predicted permease AM352_RS06985 PF04972 BON domain AM352_RS06990 PF13580 SIS domain AM352_RS06995 PF02021 Uncharacterised protein family UPF0102 AM352_RS07000 PF04348 LppC putative lipoprotein AM352_RS07005 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM352_RS07010 PF13784 Fic/DOC family N-terminal AM352_RS07010 PF02661 Fic/DOC family AM352_RS07015 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM352_RS07020 PF03613 PTS system mannose/fructose/sorbose family IID component AM352_RS07025 PF03609 PTS system sorbose-specific iic component AM352_RS07030 PF03830 PTS system sorbose subfamily IIB component AM352_RS07035 PF01116 Fructose-bisphosphate aldolase class-II AM352_RS07040 PF01380 SIS domain AM352_RS07045 PF01979 Amidohydrolase family AM352_RS07050 PF03610 PTS system fructose IIA component AM352_RS07055 PF03613 PTS system mannose/fructose/sorbose family IID component AM352_RS07060 PF03609 PTS system sorbose-specific iic component AM352_RS07065 PF03830 PTS system sorbose subfamily IIB component AM352_RS07070 PF08013 Tagatose 6 phosphate kinase AM352_RS07075 PF00455 DeoR C terminal sensor domain AM352_RS07075 PF08220 DeoR-like helix-turn-helix domain AM352_RS07080 PF08666 SAF domain AM352_RS07080 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM352_RS07085 PF03328 HpcH/HpaI aldolase/citrate lyase family AM352_RS07090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM352_RS07090 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase AM352_RS07095 PF02595 Glycerate kinase family AM352_RS07105 PF03466 LysR substrate binding domain AM352_RS07105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS07110 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS07115 PF03222 Tryptophan/tyrosine permease family AM352_RS07120 PF00871 Acetokinase family AM352_RS07125 PF01228 Glycine radical AM352_RS07125 PF02901 Pyruvate formate lyase-like AM352_RS07130 PF01042 Endoribonuclease L-PSP AM352_RS07135 PF03313 Serine dehydratase alpha chain AM352_RS07135 PF03315 Serine dehydratase beta chain AM352_RS07145 PF03313 Serine dehydratase alpha chain AM352_RS07155 PF17954 Quercetinase C-terminal cupin domain AM352_RS07155 PF02678 Pirin AM352_RS07160 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS07160 PF03466 LysR substrate binding domain AM352_RS07165 PF05656 Protein of unknown function (DUF805) AM352_RS07170 PF13409 Glutathione S-transferase, N-terminal domain AM352_RS07180 PF13997 YqjK-like protein AM352_RS07185 PF07332 Putative Actinobacterial Holin-X, holin superfamily III AM352_RS07190 PF05957 Bacterial protein of unknown function (DUF883) AM352_RS07195 PF06476 Protein of unknown function (DUF1090) AM352_RS07200 PF13721 SecD export protein N-terminal TM region AM352_RS07205 PF09335 SNARE associated Golgi protein AM352_RS07210 PF07729 FCD domain AM352_RS07210 PF00392 Bacterial regulatory proteins, gntR family AM352_RS07215 PF07690 Major Facilitator Superfamily AM352_RS07220 PF02614 Glucuronate isomerase AM352_RS07225 PF08666 SAF domain AM352_RS07225 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus AM352_RS07230 PF00375 Sodium:dicarboxylate symporter family AM352_RS07235 PF03741 Integral membrane protein TerC family AM352_RS07240 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM352_RS07245 PF01863 Protein of unknown function DUF45 AM352_RS07250 PF05175 Methyltransferase small domain AM352_RS07255 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS07255 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM352_RS07260 PF01204 Trehalase AM352_RS07270 PF13520 Amino acid permease AM352_RS07275 PF04074 YhcH/YjgK/YiaL AM352_RS07280 PF02929 Beta galactosidase small chain AM352_RS07280 PF16353 Domain of unknown function(DUF4981) AM352_RS07280 PF00703 Glycosyl hydrolases family 2 AM352_RS07280 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM352_RS07280 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM352_RS07285 PF00356 Bacterial regulatory proteins, lacI family AM352_RS07290 PF01588 Putative tRNA binding domain AM352_RS07295 PF00202 Aminotransferase class-III AM352_RS07300 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS07300 PF08447 PAS fold AM352_RS07305 PF00672 HAMP domain AM352_RS07305 PF02203 Tar ligand binding domain homologue AM352_RS07305 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS07310 PF03551 Transcriptional regulator PadR-like family AM352_RS07315 PF08021 Siderophore-interacting FAD-binding domain AM352_RS07315 PF04954 Siderophore-interacting protein AM352_RS07320 PF02733 Dak1 domain AM352_RS07320 PF02734 DAK2 domain AM352_RS07330 PF00465 Iron-containing alcohol dehydrogenase AM352_RS07335 PF00989 PAS fold AM352_RS07335 PF00158 Sigma-54 interaction domain AM352_RS07335 PF02954 Bacterial regulatory protein, Fis family AM352_RS07340 PF08986 Domain of unknown function (DUF1889) AM352_RS07350 PF03167 Uracil DNA glycosylase superfamily AM352_RS07355 PF00140 Sigma-70 factor, region 1.2 AM352_RS07355 PF04539 Sigma-70 region 3 AM352_RS07355 PF04542 Sigma-70 region 2 AM352_RS07355 PF04546 Sigma-70, non-essential region AM352_RS07355 PF03979 Sigma-70 factor, region 1.1 AM352_RS07355 PF04545 Sigma-70, region 4 AM352_RS07365 PF10410 DnaB-helicase binding domain of primase AM352_RS07365 PF01807 CHC2 zinc finger AM352_RS07365 PF08278 DNA primase DnaG DnaB-binding AM352_RS07365 PF08275 DNA primase catalytic core, N-terminal domain AM352_RS07370 PF01165 Ribosomal protein S21 AM352_RS07380 PF00814 Glycoprotease family AM352_RS07385 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM352_RS07390 PF01730 UreF AM352_RS07395 PF05194 UreE urease accessory protein, C-terminal domain AM352_RS07395 PF02814 UreE urease accessory protein, N-terminal domain AM352_RS07400 PF00449 Urease alpha-subunit, N-terminal domain AM352_RS07400 PF01979 Amidohydrolase family AM352_RS07405 PF00699 Urease beta subunit AM352_RS07410 PF00547 Urease, gamma subunit AM352_RS07415 PF01774 UreD urease accessory protein AM352_RS07420 PF00939 Sodium:sulfate symporter transmembrane region AM352_RS07425 PF05683 Fumarase C-terminus AM352_RS07430 PF05681 Fumarate hydratase (Fumerase) AM352_RS07435 PF03466 LysR substrate binding domain AM352_RS07435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS07440 PF02660 Glycerol-3-phosphate acyltransferase AM352_RS07445 PF02152 Dihydroneopterin aldolase AM352_RS07450 PF02673 Bacitracin resistance protein BacA AM352_RS07455 PF01743 Poly A polymerase head domain AM352_RS07455 PF01966 HD domain AM352_RS07455 PF12627 Probable RNA and SrmB- binding site of polymerase A AM352_RS07460 PF08239 Bacterial SH3 domain AM352_RS07465 PF01928 CYTH domain AM352_RS07470 PF03710 Glutamate-ammonia ligase adenylyltransferase AM352_RS07470 PF08335 GlnD PII-uridylyltransferase AM352_RS07475 PF01467 Cytidylyltransferase-like AM352_RS07475 PF00294 pfkB family carbohydrate kinase AM352_RS07480 PF08971 Glycogen synthesis protein AM352_RS07485 PF04380 Membrane fusogenic activity AM352_RS07490 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase AM352_RS07500 PF02535 ZIP Zinc transporter AM352_RS07505 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase AM352_RS07515 PF03738 Glutathionylspermidine synthase preATP-grasp AM352_RS07520 PF06693 Protein of unknown function (DUF1190) AM352_RS07530 PF02321 Outer membrane efflux protein AM352_RS07535 PF00293 NUDIX domain AM352_RS07540 PF06853 Protein of unknown function (DUF1249) AM352_RS07545 PF00149 Calcineurin-like phosphoesterase AM352_RS07550 PF05728 Uncharacterised protein family (UPF0227) AM352_RS07555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS07555 PF00986 DNA gyrase B subunit, carboxyl terminus AM352_RS07555 PF00204 DNA gyrase B AM352_RS07555 PF01751 Toprim domain AM352_RS07560 PF12833 Helix-turn-helix domain AM352_RS07560 PF10114 Sensory domain found in PocR AM352_RS07570 PF01306 LacY proton/sugar symporter AM352_RS07575 PF07470 Glycosyl Hydrolase Family 88 AM352_RS07580 PF03992 Antibiotic biosynthesis monooxygenase AM352_RS07585 PF02525 Flavodoxin-like fold AM352_RS07590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS07590 PF08521 Two-component sensor kinase N-terminal AM352_RS07590 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS07595 PF00486 Transcriptional regulatory protein, C terminal AM352_RS07595 PF00072 Response regulator receiver domain AM352_RS07600 PF04076 Bacterial OB fold (BOF) protein AM352_RS07605 PF03989 DNA gyrase C-terminal domain, beta-propeller AM352_RS07605 PF00521 DNA gyrase/topoisomerase IV, subunit A AM352_RS07610 PF01553 Acyltransferase AM352_RS07615 PF07732 Multicopper oxidase AM352_RS07615 PF00394 Multicopper oxidase AM352_RS07615 PF07731 Multicopper oxidase AM352_RS07620 PF11842 Domain of unknown function (DUF3362) AM352_RS07620 PF04055 Radical SAM superfamily AM352_RS07620 PF08497 Radical SAM N-terminal AM352_RS07630 PF00248 Aldo/keto reductase family AM352_RS07635 PF00465 Iron-containing alcohol dehydrogenase AM352_RS07640 PF12833 Helix-turn-helix domain AM352_RS07640 PF06719 AraC-type transcriptional regulator N-terminus AM352_RS07645 PF09335 SNARE associated Golgi protein AM352_RS07655 PF01053 Cys/Met metabolism PLP-dependent enzyme AM352_RS07665 PF01618 MotA/TolQ/ExbB proton channel family AM352_RS07670 PF02472 Biopolymer transport protein ExbD/TolR AM352_RS07690 PF00248 Aldo/keto reductase family AM352_RS07695 PF01738 Dienelactone hydrolase family AM352_RS07700 PF02203 Tar ligand binding domain homologue AM352_RS07700 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS07700 PF00672 HAMP domain AM352_RS07705 PF11115 Protein of unknown function (DUF2623) AM352_RS07710 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM352_RS07710 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal AM352_RS07715 PF13247 4Fe-4S dicluster domain AM352_RS07720 PF03916 Polysulphide reductase, NrfD AM352_RS07725 PF00374 Nickel-dependent hydrogenase AM352_RS07730 PF01750 Hydrogenase maturation protease AM352_RS07735 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE AM352_RS07740 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM352_RS07745 PF01455 HupF/HypC family AM352_RS07750 PF01497 Periplasmic binding protein AM352_RS07760 PF02798 Glutathione S-transferase, N-terminal domain AM352_RS07765 PF00384 Molybdopterin oxidoreductase AM352_RS07770 PF05257 CHAP domain AM352_RS07770 PF03738 Glutathionylspermidine synthase preATP-grasp AM352_RS07775 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS07775 PF00107 Zinc-binding dehydrogenase AM352_RS07780 PF12833 Helix-turn-helix domain AM352_RS07780 PF06719 AraC-type transcriptional regulator N-terminus AM352_RS07785 PF00561 alpha/beta hydrolase fold AM352_RS07790 PF00376 MerR family regulatory protein AM352_RS07800 PF13954 PapC N-terminal domain AM352_RS07800 PF00577 Outer membrane usher protein AM352_RS07800 PF13953 PapC C-terminal domain AM352_RS07805 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS07805 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS07820 PF01627 Hpt domain AM352_RS07820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS07820 PF00072 Response regulator receiver domain AM352_RS07820 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS07820 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS07825 PF00196 Bacterial regulatory proteins, luxR family AM352_RS07825 PF00072 Response regulator receiver domain AM352_RS07830 PF11769 Protein of unknown function (DUF3313) AM352_RS07835 PF11742 Protein of unknown function (DUF3302) AM352_RS07840 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS07840 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS07845 PF12833 Helix-turn-helix domain AM352_RS07850 PF03797 Autotransporter beta-domain AM352_RS07860 PF04474 Protein of unknown function (DUF554) AM352_RS07870 PF01276 Orn/Lys/Arg decarboxylase, major domain AM352_RS07870 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM352_RS07870 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM352_RS07875 PF03825 Nucleoside H+ symporter AM352_RS07880 PF01464 Transglycosylase SLT domain AM352_RS07880 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain AM352_RS07885 PF04362 Bacterial Fe(2+) trafficking AM352_RS07890 PF10576 Iron-sulfur binding domain of endonuclease III AM352_RS07890 PF00633 Helix-hairpin-helix motif AM352_RS07890 PF14815 NUDIX domain AM352_RS07890 PF00730 HhH-GPD superfamily base excision DNA repair protein AM352_RS07895 PF02390 Putative methyltransferase AM352_RS07900 PF04320 Protein with unknown function (DUF469) AM352_RS07905 PF11101 Protein of unknown function (DUF2884) AM352_RS07910 PF00710 Asparaginase, N-terminal AM352_RS07910 PF17763 Glutaminase/Asparaginase C-terminal domain AM352_RS07915 PF06969 HemN C-terminal domain AM352_RS07915 PF04055 Radical SAM superfamily AM352_RS07920 PF01725 Ham1 family AM352_RS07925 PF02594 Uncharacterised ACR, YggU family COG1872 AM352_RS07930 PF02325 YGGT family AM352_RS07935 PF01168 Alanine racemase, N-terminal domain AM352_RS07940 PF00437 Type II/IV secretion system protein AM352_RS07945 PF03652 Holliday junction resolvase AM352_RS07950 PF02622 Uncharacterized ACR, COG1678 AM352_RS07955 PF02951 Prokaryotic glutathione synthetase, N-terminal domain AM352_RS07955 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain AM352_RS07960 PF04452 RNA methyltransferase AM352_RS07965 PF04231 Endonuclease I AM352_RS07970 PF17283 SprT-like zinc ribbon domain AM352_RS07970 PF10263 SprT-like family AM352_RS07975 PF00083 Sugar (and other) transporter AM352_RS07980 PF02772 S-adenosylmethionine synthetase, central domain AM352_RS07980 PF02773 S-adenosylmethionine synthetase, C-terminal domain AM352_RS07980 PF00438 S-adenosylmethionine synthetase, N-terminal domain AM352_RS07990 PF11036 Virulence promoting factor AM352_RS07995 PF17944 Arginine decarboxylase C-terminal helical extension AM352_RS07995 PF17810 Arginine decarboxylase helical bundle domain AM352_RS07995 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM352_RS08000 PF00491 Arginase family AM352_RS08005 PF03573 outer membrane porin, OprD family AM352_RS08015 PF01435 Peptidase family M48 AM352_RS08020 PF02779 Transketolase, pyrimidine binding domain AM352_RS08020 PF02780 Transketolase, C-terminal domain AM352_RS08020 PF00456 Transketolase, thiamine diphosphate binding domain AM352_RS08025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS08030 PF02378 Phosphotransferase system, EIIC AM352_RS08030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS08035 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS08035 PF00107 Zinc-binding dehydrogenase AM352_RS08040 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded AM352_RS08045 PF05068 Mannitol repressor AM352_RS08055 PF12558 ATP-binding cassette cobalt transporter AM352_RS08055 PF00005 ABC transporter AM352_RS08060 PF00005 ABC transporter AM352_RS08085 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM352_RS08085 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM352_RS08090 PF00162 Phosphoglycerate kinase AM352_RS08095 PF01116 Fructose-bisphosphate aldolase class-II AM352_RS08100 PF00696 Amino acid kinase family AM352_RS08105 PF07690 Major Facilitator Superfamily AM352_RS08110 PF00549 CoA-ligase AM352_RS08110 PF02629 CoA binding domain AM352_RS08115 PF06545 Protein of unknown function (DUF1116) AM352_RS08120 PF11392 Protein of unknown function (DUF2877) AM352_RS08125 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS08125 PF03466 LysR substrate binding domain AM352_RS08130 PF05552 Conserved TM helix AM352_RS08130 PF00924 Mechanosensitive ion channel AM352_RS08140 PF01810 LysE type translocator AM352_RS08145 PF04402 Protein of unknown function (DUF541) AM352_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS08150 PF03466 LysR substrate binding domain AM352_RS08155 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) AM352_RS08165 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM352_RS08165 PF01842 ACT domain AM352_RS08165 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM352_RS08170 PF01812 5-formyltetrahydrofolate cyclo-ligase family AM352_RS08180 PF05164 Cell division protein ZapA AM352_RS08190 PF03695 Uncharacterised protein family (UPF0149) AM352_RS08195 PF05195 Aminopeptidase P, N-terminal domain AM352_RS08195 PF00557 Metallopeptidase family M24 AM352_RS08200 PF01494 FAD binding domain AM352_RS08205 PF01494 FAD binding domain AM352_RS08215 PF01571 Aminomethyltransferase folate-binding domain AM352_RS08215 PF08669 Glycine cleavage T-protein C-terminal barrel domain AM352_RS08220 PF01597 Glycine cleavage H-protein AM352_RS08225 PF02347 Glycine cleavage system P-protein AM352_RS08230 PF00232 Glycosyl hydrolase family 1 AM352_RS08235 PF01418 Helix-turn-helix domain, rpiR family AM352_RS08235 PF01380 SIS domain AM352_RS08240 PF04266 ASCH domain AM352_RS08245 PF03006 Haemolysin-III related AM352_RS08250 PF01571 Aminomethyltransferase folate-binding domain AM352_RS08260 PF03937 Flavinator of succinate dehydrogenase AM352_RS08265 PF07254 Membrane-bound toxin component of toxin-antitoxin system AM352_RS08270 PF00258 Flavodoxin AM352_RS08275 PF00589 Phage integrase family AM352_RS08275 PF02899 Phage integrase, N-terminal SAM-like domain AM352_RS08280 PF10411 Disulfide bond isomerase protein N-terminus AM352_RS08280 PF13098 Thioredoxin-like domain AM352_RS08285 PF01368 DHH family AM352_RS08285 PF02272 DHHA1 domain AM352_RS08285 PF17768 RecJ OB domain AM352_RS08295 PF00152 tRNA synthetases class II (D, K and N) AM352_RS08295 PF01336 OB-fold nucleic acid binding domain AM352_RS08305 PF00293 NUDIX domain AM352_RS08310 PF01551 Peptidase family M23 AM352_RS08310 PF01476 LysM domain AM352_RS08320 PF02589 LUD domain AM352_RS08325 PF02589 LUD domain AM352_RS08325 PF13183 4Fe-4S dicluster domain AM352_RS08325 PF11870 Domain of unknown function (DUF3390) AM352_RS08330 PF02754 Cysteine-rich domain AM352_RS08335 PF02652 L-lactate permease AM352_RS08340 PF06902 Divergent 4Fe-4S mono-cluster AM352_RS08345 PF14542 GCN5-related N-acetyl-transferase AM352_RS08350 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS08350 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS08360 PF13953 PapC C-terminal domain AM352_RS08360 PF13954 PapC N-terminal domain AM352_RS08360 PF00577 Outer membrane usher protein AM352_RS08365 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS08365 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS08380 PF03824 High-affinity nickel-transport protein AM352_RS08385 PF02583 Metal-sensitive transcriptional repressor AM352_RS08390 PF00196 Bacterial regulatory proteins, luxR family AM352_RS08405 PF03222 Tryptophan/tyrosine permease family AM352_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS08415 PF03466 LysR substrate binding domain AM352_RS08420 PF00108 Thiolase, N-terminal domain AM352_RS08420 PF02803 Thiolase, C-terminal domain AM352_RS08425 PF04962 KduI/IolB family AM352_RS08440 PF01177 Asp/Glu/Hydantoin racemase AM352_RS08445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS08445 PF03466 LysR substrate binding domain AM352_RS08450 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain AM352_RS08450 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain AM352_RS08455 PF00356 Bacterial regulatory proteins, lacI family AM352_RS08460 PF00356 Bacterial regulatory proteins, lacI family AM352_RS08470 PF01553 Acyltransferase AM352_RS08470 PF00501 AMP-binding enzyme AM352_RS08475 PF07690 Major Facilitator Superfamily AM352_RS08485 PF00248 Aldo/keto reductase family AM352_RS08490 PF06004 Bacterial protein of unknown function (DUF903) AM352_RS08495 PF03741 Integral membrane protein TerC family AM352_RS08500 PF02976 DNA mismatch repair enzyme MutH AM352_RS08505 PF00293 NUDIX domain AM352_RS08510 PF05524 PEP-utilising enzyme, N-terminal AM352_RS08510 PF00391 PEP-utilising enzyme, mobile domain AM352_RS08510 PF02896 PEP-utilising enzyme, TIM barrel domain AM352_RS08510 PF01590 GAF domain AM352_RS08515 PF01790 Prolipoprotein diacylglyceryl transferase AM352_RS08520 PF00303 Thymidylate synthase AM352_RS08525 PF07963 Prokaryotic N-terminal methylation motif AM352_RS08530 PF07963 Prokaryotic N-terminal methylation motif AM352_RS08535 PF10713 Protein of unknown function (DUF2509) AM352_RS08540 PF12528 Type II secretion prepilin peptidase dependent protein C AM352_RS08540 PF07963 Prokaryotic N-terminal methylation motif AM352_RS08545 PF17946 RecC C-terminal domain AM352_RS08550 PF00675 Insulinase (Peptidase family M16) AM352_RS08550 PF05193 Peptidase M16 inactive domain AM352_RS08550 PF16187 Middle or third domain of peptidase_M16 AM352_RS08555 PF13361 UvrD-like helicase C-terminal domain AM352_RS08555 PF00580 UvrD/REP helicase N-terminal domain AM352_RS08555 PF12705 PD-(D/E)XK nuclease superfamily AM352_RS08560 PF13538 UvrD-like helicase C-terminal domain AM352_RS08565 PF00583 Acetyltransferase (GNAT) family AM352_RS08565 PF00696 Amino acid kinase family AM352_RS08570 PF11741 AMIN domain AM352_RS08570 PF01520 N-acetylmuramoyl-L-alanine amidase AM352_RS08590 PF03562 MltA specific insert domain AM352_RS08590 PF06725 3D domain AM352_RS08595 PF00899 ThiF family AM352_RS08600 PF02657 Fe-S metabolism associated domain AM352_RS08605 PF00266 Aminotransferase class-V AM352_RS08610 PF06004 Bacterial protein of unknown function (DUF903) AM352_RS08615 PF03466 LysR substrate binding domain AM352_RS08615 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS08620 PF04241 Protein of unknown function (DUF423) AM352_RS08625 PF01728 FtsJ-like methyltransferase AM352_RS08625 PF18125 RlmM ferredoxin-like domain AM352_RS08630 PF00455 DeoR C terminal sensor domain AM352_RS08630 PF08220 DeoR-like helix-turn-helix domain AM352_RS08635 PF05025 RbsD / FucU transport protein family AM352_RS08640 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS08640 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS08645 PF07882 L-fucose isomerase, second N-terminal domain AM352_RS08645 PF07881 L-fucose isomerase, first N-terminal domain AM352_RS08645 PF02952 L-fucose isomerase, C-terminal domain AM352_RS08650 PF07690 Major Facilitator Superfamily AM352_RS08660 PF00596 Class II Aldolase and Adducin N-terminal domain AM352_RS08665 PF00465 Iron-containing alcohol dehydrogenase AM352_RS08670 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain AM352_RS08670 PF01367 5'-3' exonuclease, C-terminal SAM fold AM352_RS08680 PF03313 Serine dehydratase alpha chain AM352_RS08680 PF03315 Serine dehydratase beta chain AM352_RS08695 PF11892 Domain of unknown function (DUF3412) AM352_RS08695 PF03641 Possible lysine decarboxylase AM352_RS08695 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases AM352_RS08700 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term AM352_RS08700 PF14489 QueF-like protein AM352_RS08705 PF07348 Syd protein (SUKH-2) AM352_RS08710 PF04287 tRNA pseudouridine synthase C AM352_RS08715 PF00849 RNA pseudouridylate synthase AM352_RS08720 PF00258 Flavodoxin AM352_RS08730 PF07690 Major Facilitator Superfamily AM352_RS08735 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM352_RS08735 PF13378 Enolase C-terminal domain-like AM352_RS08740 PF13378 Enolase C-terminal domain-like AM352_RS08745 PF02595 Glycerate kinase family AM352_RS08750 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM352_RS08750 PF00072 Response regulator receiver domain AM352_RS08750 PF01627 Hpt domain AM352_RS08750 PF00672 HAMP domain AM352_RS08750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS08750 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS08755 PF05958 tRNA (Uracil-5-)-methyltransferase AM352_RS08755 PF01938 TRAM domain AM352_RS08760 PF13291 ACT domain AM352_RS08760 PF02824 TGS domain AM352_RS08760 PF04607 Region found in RelA / SpoT proteins AM352_RS08765 PF03819 MazG nucleotide pyrophosphohydrolase domain AM352_RS08775 PF00117 Glutamine amidotransferase class-I AM352_RS08775 PF06418 CTP synthase N-terminus AM352_RS08780 PF00113 Enolase, C-terminal TIM barrel domain AM352_RS08780 PF03952 Enolase, N-terminal domain AM352_RS08785 PF04055 Radical SAM superfamily AM352_RS08790 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS08790 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS08795 PF07690 Major Facilitator Superfamily AM352_RS08805 PF02913 FAD linked oxidases, C-terminal domain AM352_RS08805 PF01565 FAD binding domain AM352_RS08810 PF00083 Sugar (and other) transporter AM352_RS08815 PF01012 Electron transfer flavoprotein domain AM352_RS08820 PF01012 Electron transfer flavoprotein domain AM352_RS08820 PF00766 Electron transfer flavoprotein FAD-binding domain AM352_RS08825 PF04309 Glycerol-3-phosphate responsive antiterminator AM352_RS08835 PF01266 FAD dependent oxidoreductase AM352_RS08840 PF01242 6-pyruvoyl tetrahydropterin synthase AM352_RS08850 PF00175 Oxidoreductase NAD-binding domain AM352_RS08850 PF00258 Flavodoxin AM352_RS08850 PF00667 FAD binding domain AM352_RS08855 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM352_RS08855 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM352_RS08865 PF01507 Phosphoadenosine phosphosulfate reductase family AM352_RS08870 PF04389 Peptidase family M28 AM352_RS08875 PF01507 Phosphoadenosine phosphosulfate reductase family AM352_RS08880 PF00009 Elongation factor Tu GTP binding domain AM352_RS08890 PF12084 Protein of unknown function (DUF3561) AM352_RS08895 PF04977 Septum formation initiator AM352_RS08900 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase AM352_RS08905 PF02542 YgbB family AM352_RS08910 PF01142 tRNA pseudouridine synthase D (TruD) AM352_RS08915 PF01975 Survival protein SurE AM352_RS08925 PF01476 LysM domain AM352_RS08925 PF01551 Peptidase family M23 AM352_RS08930 PF04545 Sigma-70, region 4 AM352_RS08930 PF04539 Sigma-70 region 3 AM352_RS08930 PF04542 Sigma-70 region 2 AM352_RS08930 PF00140 Sigma-70 factor, region 1.2 AM352_RS08935 PF01047 MarR family AM352_RS08940 PF02441 Flavoprotein AM352_RS08945 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase AM352_RS08955 PF05188 MutS domain II AM352_RS08955 PF05190 MutS family domain IV AM352_RS08955 PF00488 MutS domain V AM352_RS08955 PF01624 MutS domain I AM352_RS08955 PF05192 MutS domain III AM352_RS08960 PF00950 ABC 3 transport family AM352_RS08965 PF00950 ABC 3 transport family AM352_RS08970 PF00005 ABC transporter AM352_RS08975 PF01297 Zinc-uptake complex component A periplasmic AM352_RS08980 PF11756 Nitrous oxide-stimulated promoter AM352_RS08985 PF03459 TOBE domain AM352_RS08985 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS08990 PF00158 Sigma-54 interaction domain AM352_RS08990 PF02954 Bacterial regulatory protein, Fis family AM352_RS08990 PF01590 GAF domain AM352_RS08995 PF00586 AIR synthase related protein, N-terminal domain AM352_RS08995 PF02769 AIR synthase related protein, C-terminal domain AM352_RS09000 PF01924 Hydrogenase formation hypA family AM352_RS09005 PF01455 HupF/HypC family AM352_RS09010 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM352_RS09015 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA AM352_RS09020 PF11046 Transcriptional repressor of hyc and hyp operons AM352_RS09025 PF13247 4Fe-4S dicluster domain AM352_RS09030 PF00361 Proton-conducting membrane transporter AM352_RS09035 PF00146 NADH dehydrogenase AM352_RS09040 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM352_RS09040 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM352_RS09040 PF00374 Nickel-dependent hydrogenase AM352_RS09045 PF12838 4Fe-4S dicluster domain AM352_RS09050 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM352_RS09055 PF07450 Formate hydrogenlyase maturation protein HycH AM352_RS09060 PF01750 Hydrogenase maturation protease AM352_RS09065 PF00232 Glycosyl hydrolase family 1 AM352_RS09070 PF02378 Phosphotransferase system, EIIC AM352_RS09070 PF00367 phosphotransferase system, EIIB AM352_RS09075 PF00356 Bacterial regulatory proteins, lacI family AM352_RS09080 PF12800 4Fe-4S binding domain AM352_RS09080 PF13247 4Fe-4S dicluster domain AM352_RS09085 PF07503 HypF finger AM352_RS09085 PF01300 Telomere recombination AM352_RS09085 PF00708 Acylphosphatase AM352_RS09085 PF17788 HypF Kae1-like domain AM352_RS09090 PF18113 Rubredoxin binding C-terminal domain AM352_RS09090 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS09095 PF00301 Rubredoxin AM352_RS09095 PF00753 Metallo-beta-lactamase superfamily AM352_RS09095 PF00258 Flavodoxin AM352_RS09100 PF00158 Sigma-54 interaction domain AM352_RS09100 PF01590 GAF domain AM352_RS09105 PF00571 CBS domain AM352_RS09105 PF01380 SIS domain AM352_RS09110 PF08220 DeoR-like helix-turn-helix domain AM352_RS09110 PF00455 DeoR C terminal sensor domain AM352_RS09115 PF06923 Glucitol operon activator protein (GutM) AM352_RS09120 PF00106 short chain dehydrogenase AM352_RS09125 PF03829 PTS system glucitol/sorbitol-specific IIA component AM352_RS09130 PF03612 Sorbitol phosphotransferase enzyme II N-terminus AM352_RS09130 PF07663 Sorbitol phosphotransferase enzyme II C-terminus AM352_RS09135 PF03608 PTS system enzyme II sorbitol-specific factor AM352_RS09140 PF13406 Transglycosylase SLT domain AM352_RS09145 PF00005 ABC transporter AM352_RS09150 PF00950 ABC 3 transport family AM352_RS09155 PF01297 Zinc-uptake complex component A periplasmic AM352_RS09160 PF02464 Competence-damaged protein AM352_RS09165 PF00154 recA bacterial DNA recombination protein AM352_RS09170 PF02631 RecX family AM352_RS09175 PF02272 DHHA1 domain AM352_RS09175 PF01411 tRNA synthetases class II (A) AM352_RS09175 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM352_RS09180 PF02599 Global regulator protein family AM352_RS09210 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS09215 PF09335 SNARE associated Golgi protein AM352_RS09220 PF04262 Glutamate-cysteine ligase AM352_RS09225 PF02664 S-Ribosylhomocysteinase (LuxS) AM352_RS09235 PF07690 Major Facilitator Superfamily AM352_RS09240 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS09240 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS09245 PF01047 MarR family AM352_RS09250 PF05437 Branched-chain amino acid transport protein (AzlD) AM352_RS09255 PF03591 AzlC protein AM352_RS09260 PF07690 Major Facilitator Superfamily AM352_RS09265 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM352_RS09270 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS09275 PF00571 CBS domain AM352_RS09275 PF00005 ABC transporter AM352_RS09285 PF00268 Ribonucleotide reductase, small chain AM352_RS09290 PF00317 Ribonucleotide reductase, all-alpha domain AM352_RS09290 PF08343 Ribonucleotide reductase N-terminal AM352_RS09290 PF02867 Ribonucleotide reductase, barrel domain AM352_RS09295 PF07972 NrdI Flavodoxin like AM352_RS09300 PF00462 Glutaredoxin AM352_RS09305 PF02627 Carboxymuconolactone decarboxylase family AM352_RS09310 PF00155 Aminotransferase class I and II AM352_RS09310 PF00392 Bacterial regulatory proteins, gntR family AM352_RS09315 PF05957 Bacterial protein of unknown function (DUF883) AM352_RS09320 PF09400 Protein of unknown function (DUF2002) AM352_RS09325 PF06610 L-alanine exporter AM352_RS09335 PF00816 H-NS histone family AM352_RS09340 PF00581 Rhodanese-like domain AM352_RS09340 PF11127 Protein of unknown function (DUF2892) AM352_RS09345 PF04972 BON domain AM352_RS09345 PF01476 LysM domain AM352_RS09350 PF00392 Bacterial regulatory proteins, gntR family AM352_RS09350 PF07729 FCD domain AM352_RS09355 PF00324 Amino acid permease AM352_RS09360 PF00202 Aminotransferase class-III AM352_RS09365 PF00171 Aldehyde dehydrogenase family AM352_RS09370 PF01266 FAD dependent oxidoreductase AM352_RS09375 PF08943 CsiD AM352_RS09385 PF01970 Tripartite tricarboxylate transporter TctA family AM352_RS09400 PF00486 Transcriptional regulatory protein, C terminal AM352_RS09400 PF00072 Response regulator receiver domain AM352_RS09405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS09405 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS09430 PF00171 Aldehyde dehydrogenase family AM352_RS09435 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS09435 PF00205 Thiamine pyrophosphate enzyme, central domain AM352_RS09435 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS09440 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM352_RS09440 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM352_RS09445 PF13407 Periplasmic binding protein domain AM352_RS09450 PF00005 ABC transporter AM352_RS09455 PF02653 Branched-chain amino acid transport system / permease component AM352_RS09460 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM352_RS09460 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM352_RS09465 PF00294 pfkB family carbohydrate kinase AM352_RS09470 PF01261 Xylose isomerase-like TIM barrel AM352_RS09475 PF04962 KduI/IolB family AM352_RS09480 PF08447 PAS fold AM352_RS09480 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS09490 PF00005 ABC transporter AM352_RS09495 PF02653 Branched-chain amino acid transport system / permease component AM352_RS09510 PF01636 Phosphotransferase enzyme family AM352_RS09515 PF01008 Initiation factor 2 subunit family AM352_RS09520 PF03079 ARD/ARD' family AM352_RS09530 PF00596 Class II Aldolase and Adducin N-terminal domain AM352_RS09535 PF07274 Protein of unknown function (DUF1440) AM352_RS09545 PF06183 DinI-like family AM352_RS09555 PF06755 CbtA_toxin of type IV toxin-antitoxin system AM352_RS09560 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A AM352_RS09565 PF06174 Protein of unknown function (DUF987) AM352_RS09570 PF04002 RadC-like JAB domain AM352_RS09575 PF03230 Antirestriction protein AM352_RS09585 PF06067 Domain of unknown function (DUF932) AM352_RS09605 PF01926 50S ribosome-binding GTPase AM352_RS09610 PF13148 Protein of unknown function (DUF3987) AM352_RS09645 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) AM352_RS09700 PF00589 Phage integrase family AM352_RS09700 PF13356 Arm DNA-binding domain AM352_RS09710 PF01668 SmpB protein AM352_RS09715 PF03364 Polyketide cyclase / dehydrase and lipid transport AM352_RS09720 PF03658 RnfH family Ubiquitin AM352_RS09725 PF04355 SmpA / OmlA family AM352_RS09730 PF02463 RecF/RecN/SMC N terminal domain AM352_RS09735 PF01513 ATP-NAD kinase AM352_RS09745 PF01025 GrpE AM352_RS09750 PF01595 Cyclin M transmembrane N-terminal domain AM352_RS09750 PF03471 Transporter associated domain AM352_RS09750 PF00571 CBS domain AM352_RS09755 PF01578 Cytochrome C assembly protein AM352_RS09760 PF02881 SRP54-type protein, helical bundle domain AM352_RS09760 PF00448 SRP54-type protein, GTPase domain AM352_RS09760 PF02978 Signal peptide binding domain AM352_RS09765 PF00886 Ribosomal protein S16 AM352_RS09770 PF05239 PRC-barrel domain AM352_RS09770 PF01782 RimM N-terminal domain AM352_RS09775 PF01746 tRNA (Guanine-1)-methyltransferase AM352_RS09780 PF01245 Ribosomal protein L19 AM352_RS09795 PF00691 OmpA family AM352_RS09800 PF17152 Periplasmic sensor domain AM352_RS09800 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS09805 PF13689 YfiR/HmsC-like AM352_RS09810 PF10973 Protein of unknown function (DUF2799) AM352_RS09820 PF00793 DAHP synthetase I family AM352_RS09825 PF01817 Chorismate mutase type II AM352_RS09825 PF02153 Prephenate dehydrogenase AM352_RS09830 PF00800 Prephenate dehydratase AM352_RS09830 PF01817 Chorismate mutase type II AM352_RS09840 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein AM352_RS09845 PF13525 Outer membrane lipoprotein AM352_RS09850 PF01479 S4 domain AM352_RS09850 PF00849 RNA pseudouridylate synthase AM352_RS09855 PF02578 Multi-copper polyphenol oxidoreductase laccase AM352_RS09860 PF00004 ATPase family associated with various cellular activities (AAA) AM352_RS09860 PF07724 AAA domain (Cdc48 subfamily) AM352_RS09860 PF17871 AAA lid domain AM352_RS09860 PF02861 Clp amino terminal domain, pathogenicity island component AM352_RS09860 PF10431 C-terminal, D2-small domain, of ClpB protein AM352_RS09885 PF00083 Sugar (and other) transporter AM352_RS09890 PF10043 Predicted periplasmic lipoprotein (DUF2279) AM352_RS09895 PF13091 PLD-like domain AM352_RS09900 PF13607 Succinyl-CoA ligase like flavodoxin domain AM352_RS09900 PF13380 CoA binding domain AM352_RS09900 PF00583 Acetyltransferase (GNAT) family AM352_RS09905 PF03942 DTW domain AM352_RS09910 PF00085 Thioredoxin AM352_RS09915 PF08032 RNA 2'-O ribose methyltransferase substrate binding AM352_RS09915 PF00588 SpoU rRNA Methylase family AM352_RS09920 PF03167 Uracil DNA glycosylase superfamily AM352_RS09925 PF01228 Glycine radical AM352_RS09930 PF00271 Helicase conserved C-terminal domain AM352_RS09930 PF00270 DEAD/DEAH box helicase AM352_RS09935 PF05175 Methyltransferase small domain AM352_RS09940 PF02910 Fumarate reductase flavoprotein C-term AM352_RS09940 PF00890 FAD binding domain AM352_RS09945 PF04542 Sigma-70 region 2 AM352_RS09945 PF08281 Sigma-70, region 4 AM352_RS09950 PF03872 Anti sigma-E protein RseA, N-terminal domain AM352_RS09950 PF03873 Anti sigma-E protein RseA, C-terminal domain AM352_RS09955 PF17188 MucB/RseB C-terminal domain AM352_RS09955 PF03888 MucB/RseB N-terminal domain AM352_RS09965 PF06421 GTP-binding protein LepA C-terminus AM352_RS09965 PF03144 Elongation factor Tu domain 2 AM352_RS09965 PF00009 Elongation factor Tu GTP binding domain AM352_RS09965 PF00679 Elongation factor G C-terminus AM352_RS09970 PF10502 Signal peptidase, peptidase S26 AM352_RS09980 PF14622 Ribonuclease-III-like AM352_RS09980 PF00035 Double-stranded RNA binding motif AM352_RS09985 PF07650 KH domain AM352_RS09985 PF01926 50S ribosome-binding GTPase AM352_RS09990 PF02565 Recombination protein O C terminal AM352_RS09990 PF11967 Recombination protein O N terminal AM352_RS09995 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ AM352_RS10000 PF01648 4'-phosphopantetheinyl transferase superfamily AM352_RS10005 PF12838 4Fe-4S dicluster domain AM352_RS10010 PF01418 Helix-turn-helix domain, rpiR family AM352_RS10010 PF01380 SIS domain AM352_RS10015 PF01380 SIS domain AM352_RS10025 PF14437 MafB19-like deaminase AM352_RS10030 PF01464 Transglycosylase SLT domain AM352_RS10030 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS10040 PF02769 AIR synthase related protein, C-terminal domain AM352_RS10040 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain AM352_RS10040 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal AM352_RS10060 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS10060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS10065 PF13942 YfhG lipoprotein AM352_RS10070 PF00158 Sigma-54 interaction domain AM352_RS10070 PF00072 Response regulator receiver domain AM352_RS10075 PF00543 Nitrogen regulatory protein P-II AM352_RS10080 PF00970 Oxidoreductase FAD-binding domain AM352_RS10080 PF00042 Globin AM352_RS10080 PF00175 Oxidoreductase NAD-binding domain AM352_RS10090 PF00464 Serine hydroxymethyltransferase AM352_RS10095 PF00480 ROK family AM352_RS10100 PF17128 Domain of unknown function (DUF5107) AM352_RS10100 PF13181 Tetratricopeptide repeat AM352_RS10105 PF00083 Sugar (and other) transporter AM352_RS10110 PF01263 Aldose 1-epimerase AM352_RS10115 PF12832 MFS_1 like family AM352_RS10120 PF00874 PRD domain AM352_RS10125 PF06226 Protein of unknown function (DUF1007) AM352_RS10130 PF03824 High-affinity nickel-transport protein AM352_RS10135 PF00459 Inositol monophosphatase family AM352_RS10140 PF00588 SpoU rRNA Methylase family AM352_RS10145 PF02082 Transcriptional regulator AM352_RS10150 PF00266 Aminotransferase class-V AM352_RS10155 PF01592 NifU-like N terminal domain AM352_RS10160 PF01521 Iron-sulphur cluster biosynthesis AM352_RS10165 PF07743 HSCB C-terminal oligomerisation domain AM352_RS10170 PF00012 Hsp70 protein AM352_RS10175 PF00111 2Fe-2S iron-sulfur cluster binding domain AM352_RS10180 PF04384 Iron-sulphur cluster assembly AM352_RS10185 PF00883 Cytosol aminopeptidase family, catalytic domain AM352_RS10185 PF12404 Peptidase AM352_RS10190 PF14581 SseB protein C-terminal domain AM352_RS10190 PF07179 SseB protein N-terminal domain AM352_RS10195 PF00581 Rhodanese-like domain AM352_RS10200 PF07678 A-macroglobulin TED domain AM352_RS10200 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain AM352_RS10200 PF11974 Bacterial alpha-2-macroglobulin MG3 domain AM352_RS10200 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain AM352_RS10200 PF00207 Alpha-2-macroglobulin family AM352_RS10200 PF01835 MG2 domain AM352_RS10200 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain AM352_RS10200 PF17962 Bacterial macroglobulin domain 6 AM352_RS10200 PF07703 Alpha-2-macroglobulin bait region domain AM352_RS10205 PF00912 Transglycosylase AM352_RS10205 PF00905 Penicillin binding protein transpeptidase domain AM352_RS10205 PF06832 Penicillin-Binding Protein C-terminus Family AM352_RS10210 PF00334 Nucleoside diphosphate kinase AM352_RS10215 PF04055 Radical SAM superfamily AM352_RS10225 PF13464 Domain of unknown function (DUF4115) AM352_RS10230 PF04551 GcpE protein AM352_RS10235 PF03129 Anticodon binding domain AM352_RS10235 PF13393 Histidyl-tRNA synthetase AM352_RS10240 PF09976 Tetratricopeptide repeat-like domain AM352_RS10245 PF13360 PQQ-like domain AM352_RS10250 PF01926 50S ribosome-binding GTPase AM352_RS10250 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal AM352_RS10255 PF00854 POT family AM352_RS10260 PF07191 zinc-ribbons AM352_RS10265 PF13742 OB-fold nucleic acid binding domain AM352_RS10265 PF02601 Exonuclease VII, large subunit AM352_RS10270 PF00478 IMP dehydrogenase / GMP reductase domain AM352_RS10270 PF00571 CBS domain AM352_RS10275 PF02540 NAD synthase AM352_RS10275 PF00117 Glutamine amidotransferase class-I AM352_RS10275 PF00958 GMP synthase C terminal domain AM352_RS10280 PF00589 Phage integrase family AM352_RS10280 PF13356 Arm DNA-binding domain AM352_RS10320 PF04610 TrbL/VirB6 plasmid conjugal transfer protein AM352_RS10325 PF01381 Helix-turn-helix AM352_RS10335 PF01381 Helix-turn-helix AM352_RS10340 PF11119 Protein of unknown function (DUF2633) AM352_RS10345 PF05231 MASE1 AM352_RS10345 PF00563 EAL domain AM352_RS10350 PF02541 Ppx/GppA phosphatase family AM352_RS10355 PF02503 Polyphosphate kinase middle domain AM352_RS10355 PF13090 Polyphosphate kinase C-terminal domain 2 AM352_RS10355 PF17941 Polyphosphate kinase C-terminal domain 1 AM352_RS10355 PF13089 Polyphosphate kinase N-terminal domain AM352_RS10360 PF00551 Formyl transferase AM352_RS10365 PF02769 AIR synthase related protein, C-terminal domain AM352_RS10365 PF00586 AIR synthase related protein, N-terminal domain AM352_RS10375 PF00232 Glycosyl hydrolase family 1 AM352_RS10385 PF00860 Permease family AM352_RS10390 PF00308 Bacterial dnaA protein AM352_RS10395 PF02789 Cytosol aminopeptidase family, N-terminal domain AM352_RS10395 PF00883 Cytosol aminopeptidase family, catalytic domain AM352_RS10400 PF01112 Asparaginase AM352_RS10405 PF02378 Phosphotransferase system, EIIC AM352_RS10415 PF03960 ArsC family AM352_RS10420 PF01435 Peptidase family M48 AM352_RS10430 PF01594 AI-2E family transporter AM352_RS10435 PF07670 Nucleoside recognition AM352_RS10440 PF07670 Nucleoside recognition AM352_RS10445 PF01979 Amidohydrolase family AM352_RS10450 PF00578 AhpC/TSA family AM352_RS10455 PF01842 ACT domain AM352_RS10460 PF00701 Dihydrodipicolinate synthetase family AM352_RS10465 PF06804 NlpB/DapX lipoprotein AM352_RS10470 PF01259 SAICAR synthetase AM352_RS10475 PF04228 Putative neutral zinc metallopeptidase AM352_RS10480 PF08351 Domain of unknown function (DUF1726) AM352_RS10480 PF17176 tRNA-binding domain AM352_RS10480 PF05127 Helicase AM352_RS10480 PF13718 GNAT acetyltransferase 2 AM352_RS10485 PF02230 Phospholipase/Carboxylesterase AM352_RS10490 PF13980 Uncharacterised protein family (UPF0370) AM352_RS10495 PF07687 Peptidase dimerisation domain AM352_RS10495 PF01546 Peptidase family M20/M25/M40 AM352_RS10500 PF03960 ArsC family AM352_RS10510 PF00873 AcrB/AcrD/AcrF family AM352_RS10515 PF00672 HAMP domain AM352_RS10515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS10515 PF07730 Histidine kinase AM352_RS10515 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM352_RS10520 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS10520 PF13247 4Fe-4S dicluster domain AM352_RS10520 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster AM352_RS10525 PF00293 NUDIX domain AM352_RS10530 PF06674 Protein of unknown function (DUF1176) AM352_RS10535 PF00456 Transketolase, thiamine diphosphate binding domain AM352_RS10535 PF02780 Transketolase, C-terminal domain AM352_RS10535 PF02779 Transketolase, pyrimidine binding domain AM352_RS10540 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM352_RS10550 PF03949 Malic enzyme, NAD binding domain AM352_RS10550 PF00390 Malic enzyme, N-terminal domain AM352_RS10550 PF01515 Phosphate acetyl/butaryl transferase AM352_RS10555 PF00936 BMC domain AM352_RS10560 PF10662 Ethanolamine utilisation - propanediol utilisation AM352_RS10565 PF06249 Ethanolamine utilisation protein EutQ AM352_RS10570 PF01923 Cobalamin adenosyltransferase AM352_RS10575 PF01515 Phosphate acetyl/butaryl transferase AM352_RS10580 PF00936 BMC domain AM352_RS10585 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM352_RS10590 PF00171 Aldehyde dehydrogenase family AM352_RS10600 PF00465 Iron-containing alcohol dehydrogenase AM352_RS10605 PF04346 Ethanolamine utilisation protein, EutH AM352_RS10610 PF06277 Ethanolamine utilisation protein EutA AM352_RS10615 PF06751 Ethanolamine ammonia lyase large subunit (EutB) AM352_RS10620 PF05985 Ethanolamine ammonia-lyase light chain (EutC) AM352_RS10625 PF00936 BMC domain AM352_RS10630 PF16365 Ethanolamine utilization protein EutK C-terminus AM352_RS10630 PF00936 BMC domain AM352_RS10635 PF12833 Helix-turn-helix domain AM352_RS10640 PF01218 Coproporphyrinogen III oxidase AM352_RS10645 PF01520 N-acetylmuramoyl-L-alanine amidase AM352_RS10650 PF00583 Acetyltransferase (GNAT) family AM352_RS10655 PF11143 Protein of unknown function (DUF2919) AM352_RS10660 PF06572 Protein of unknown function (DUF1131) AM352_RS10665 PF04261 Dyp-type peroxidase family AM352_RS10670 PF00144 Beta-lactamase AM352_RS10675 PF00367 phosphotransferase system, EIIB AM352_RS10675 PF02378 Phosphotransferase system, EIIC AM352_RS10680 PF01380 SIS domain AM352_RS10685 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM352_RS10695 PF01380 SIS domain AM352_RS10695 PF01418 Helix-turn-helix domain, rpiR family AM352_RS10710 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS10715 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS10720 PF00005 ABC transporter AM352_RS10725 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS10730 PF00117 Glutamine amidotransferase class-I AM352_RS10735 PF00392 Bacterial regulatory proteins, gntR family AM352_RS10735 PF00155 Aminotransferase class I and II AM352_RS10740 PF08543 Phosphomethylpyrimidine kinase AM352_RS10750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM352_RS10755 PF05524 PEP-utilising enzyme, N-terminal AM352_RS10755 PF02896 PEP-utilising enzyme, TIM barrel domain AM352_RS10755 PF00391 PEP-utilising enzyme, mobile domain AM352_RS10760 PF00381 PTS HPr component phosphorylation site AM352_RS10765 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS10775 PF04354 ZipA, C-terminal FtsZ-binding domain AM352_RS10780 PF03119 NAD-dependent DNA ligase C4 zinc finger domain AM352_RS10780 PF03120 NAD-dependent DNA ligase OB-fold domain AM352_RS10780 PF01653 NAD-dependent DNA ligase adenylation domain AM352_RS10780 PF00533 BRCA1 C Terminus (BRCT) domain AM352_RS10780 PF12826 Helix-hairpin-helix motif AM352_RS10785 PF12843 Putative quorum-sensing-regulated virulence factor AM352_RS10790 PF13593 SBF-like CPA transporter family (DUF4137) AM352_RS10795 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS10795 PF03466 LysR substrate binding domain AM352_RS10805 PF01048 Phosphorylase superfamily AM352_RS10810 PF03825 Nucleoside H+ symporter AM352_RS10815 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS10815 PF03466 LysR substrate binding domain AM352_RS10840 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM352_RS10845 PF07037 Putative transcription regulator (DUF1323) AM352_RS10850 PF07037 Putative transcription regulator (DUF1323) AM352_RS10865 PF05231 MASE1 AM352_RS10865 PF00563 EAL domain AM352_RS10870 PF07670 Nucleoside recognition AM352_RS10870 PF07662 Na+ dependent nucleoside transporter C-terminus AM352_RS10870 PF01773 Na+ dependent nucleoside transporter N-terminus AM352_RS10875 PF01566 Natural resistance-associated macrophage protein AM352_RS10880 PF10697 Protein of unknown function (DUF2502) AM352_RS10885 PF00248 Aldo/keto reductase family AM352_RS10890 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS10890 PF00205 Thiamine pyrophosphate enzyme, central domain AM352_RS10890 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS10895 PF00654 Voltage gated chloride channel AM352_RS10900 PF02685 Glucokinase AM352_RS10905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS10910 PF02378 Phosphotransferase system, EIIC AM352_RS10915 PF01321 Creatinase/Prolidase N-terminal domain AM352_RS10915 PF00557 Metallopeptidase family M24 AM352_RS10920 PF05343 M42 glutamyl aminopeptidase AM352_RS10925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS10925 PF00381 PTS HPr component phosphorylation site AM352_RS10925 PF02896 PEP-utilising enzyme, TIM barrel domain AM352_RS10925 PF00391 PEP-utilising enzyme, mobile domain AM352_RS10925 PF05524 PEP-utilising enzyme, N-terminal AM352_RS10930 PF12833 Helix-turn-helix domain AM352_RS10935 PF04397 LytTr DNA-binding domain AM352_RS10935 PF00072 Response regulator receiver domain AM352_RS10940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS10940 PF06580 Histidine kinase AM352_RS10940 PF07694 5TMR of 5TMR-LYT AM352_RS10945 PF00155 Aminotransferase class I and II AM352_RS10955 PF03279 Bacterial lipid A biosynthesis acyltransferase AM352_RS10960 PF03797 Autotransporter beta-domain AM352_RS10970 PF00563 EAL domain AM352_RS10970 PF00498 FHA domain AM352_RS10970 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS10985 PF07969 Amidohydrolase family AM352_RS11000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS11000 PF03466 LysR substrate binding domain AM352_RS11005 PF12833 Helix-turn-helix domain AM352_RS11010 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM352_RS11010 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM352_RS11015 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS11015 PF13426 PAS domain AM352_RS11015 PF00563 EAL domain AM352_RS11020 PF00072 Response regulator receiver domain AM352_RS11020 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS11025 PF07995 Glucose / Sorbosone dehydrogenase AM352_RS11030 PF05977 Transmembrane secretion effector AM352_RS11040 PF01226 Formate/nitrite transporter AM352_RS11045 PF04333 MlaA lipoprotein AM352_RS11050 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) AM352_RS11060 PF04175 Protein of unknown function (DUF406) AM352_RS11065 PF00108 Thiolase, N-terminal domain AM352_RS11065 PF02803 Thiolase, C-terminal domain AM352_RS11070 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain AM352_RS11070 PF00378 Enoyl-CoA hydratase/isomerase AM352_RS11070 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain AM352_RS11075 PF00300 Histidine phosphatase superfamily (branch 1) AM352_RS11080 PF01713 Smr domain AM352_RS11085 PF05175 Methyltransferase small domain AM352_RS11090 PF01264 Chorismate synthase AM352_RS11095 PF03411 Penicillin-insensitive murein endopeptidase AM352_RS11100 PF01925 Sulfite exporter TauE/SafE AM352_RS11105 PF04315 Elongation factor P hydroxylase AM352_RS11110 PF08891 YfcL protein AM352_RS11115 PF05430 S-adenosyl-L-methionine-dependent methyltransferase AM352_RS11115 PF01266 FAD dependent oxidoreductase AM352_RS11120 PF00109 Beta-ketoacyl synthase, N-terminal domain AM352_RS11120 PF02801 Beta-ketoacyl synthase, C-terminal domain AM352_RS11145 PF07690 Major Facilitator Superfamily AM352_RS11155 PF11890 Domain of unknown function (DUF3410) AM352_RS11155 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM352_RS11155 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM352_RS11160 PF02774 Semialdehyde dehydrogenase, dimerisation domain AM352_RS11160 PF01118 Semialdehyde dehydrogenase, NAD binding domain AM352_RS11165 PF01416 tRNA pseudouridine synthase AM352_RS11170 PF09335 SNARE associated Golgi protein AM352_RS11175 PF17848 Acetyl-coA carboxylase zinc finger domain AM352_RS11175 PF01039 Carboxyl transferase domain AM352_RS11185 PF02875 Mur ligase family, glutamate ligase domain AM352_RS11185 PF08245 Mur ligase middle domain AM352_RS11190 PF05036 Sporulation related domain AM352_RS11195 PF02674 Colicin V production protein AM352_RS11200 PF00156 Phosphoribosyl transferase domain AM352_RS11205 PF02441 Flavoprotein AM352_RS11215 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS11220 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS11225 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS11230 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS11235 PF00005 ABC transporter AM352_RS11240 PF13302 Acetyltransferase (GNAT) domain AM352_RS11245 PF08338 Domain of unknown function (DUF1731) AM352_RS11245 PF01370 NAD dependent epimerase/dehydratase family AM352_RS11250 PF02152 Dihydroneopterin aldolase AM352_RS11255 PF14834 Glutathione S-transferase, C-terminal domain AM352_RS11255 PF02798 Glutathione S-transferase, N-terminal domain AM352_RS11260 PF12850 Calcineurin-like phosphoesterase superfamily domain AM352_RS11265 PF00293 NUDIX domain AM352_RS11270 PF00356 Bacterial regulatory proteins, lacI family AM352_RS11275 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS11285 PF03611 PTS system sugar-specific permease component AM352_RS11290 PF00456 Transketolase, thiamine diphosphate binding domain AM352_RS11295 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM352_RS11295 PF02780 Transketolase, C-terminal domain AM352_RS11295 PF02779 Transketolase, pyrimidine binding domain AM352_RS11305 PF03606 C4-dicarboxylate anaerobic carrier AM352_RS11310 PF07085 DRTGG domain AM352_RS11310 PF01515 Phosphate acetyl/butaryl transferase AM352_RS11315 PF00871 Acetokinase family AM352_RS11320 PF04217 Protein of unknown function, DUF412 AM352_RS11325 PF03887 YfbU domain AM352_RS11330 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS11335 PF02080 TrkA-C domain AM352_RS11335 PF03600 Citrate transporter AM352_RS11345 PF00155 Aminotransferase class I and II AM352_RS11350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS11350 PF03466 LysR substrate binding domain AM352_RS11355 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 AM352_RS11360 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit AM352_RS11365 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit AM352_RS11365 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit AM352_RS11375 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region AM352_RS11375 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM352_RS11375 PF10531 SLBB domain AM352_RS11380 PF00384 Molybdopterin oxidoreductase AM352_RS11380 PF01568 Molydopterin dinucleotide binding domain AM352_RS11380 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region AM352_RS11380 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS11385 PF00146 NADH dehydrogenase AM352_RS11390 PF12838 4Fe-4S dicluster domain AM352_RS11395 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 AM352_RS11400 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L AM352_RS11405 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus AM352_RS11405 PF00361 Proton-conducting membrane transporter AM352_RS11410 PF00361 Proton-conducting membrane transporter AM352_RS11415 PF00361 Proton-conducting membrane transporter AM352_RS11420 PF00072 Response regulator receiver domain AM352_RS11420 PF01584 CheW-like domain AM352_RS11425 PF12706 Beta-lactamase superfamily domain AM352_RS11430 PF13673 Acetyltransferase (GNAT) domain AM352_RS11435 PF05957 Bacterial protein of unknown function (DUF883) AM352_RS11440 PF00425 chorismate binding enzyme AM352_RS11445 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS11445 PF16582 Middle domain of thiamine pyrophosphate AM352_RS11445 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS11450 PF12697 Alpha/beta hydrolase family AM352_RS11455 PF00378 Enoyl-CoA hydratase/isomerase AM352_RS11460 PF13378 Enolase C-terminal domain-like AM352_RS11465 PF00501 AMP-binding enzyme AM352_RS11465 PF13193 AMP-binding enzyme C-terminal domain AM352_RS11470 PF06628 Catalase-related immune-responsive AM352_RS11470 PF00199 Catalase AM352_RS11475 PF07437 YfaZ precursor AM352_RS11480 PF00994 Probable molybdopterin binding domain AM352_RS11485 PF13183 4Fe-4S dicluster domain AM352_RS11485 PF02754 Cysteine-rich domain AM352_RS11490 PF00890 FAD binding domain AM352_RS11495 PF01266 FAD dependent oxidoreductase AM352_RS11495 PF04324 BFD-like [2Fe-2S] binding domain AM352_RS11500 PF07690 Major Facilitator Superfamily AM352_RS11505 PF03009 Glycerophosphoryl diester phosphodiesterase family AM352_RS11510 PF00111 2Fe-2S iron-sulfur cluster binding domain AM352_RS11515 PF00268 Ribonucleotide reductase, small chain AM352_RS11520 PF03477 ATP cone domain AM352_RS11520 PF02867 Ribonucleotide reductase, barrel domain AM352_RS11520 PF00317 Ribonucleotide reductase, all-alpha domain AM352_RS11530 PF00521 DNA gyrase/topoisomerase IV, subunit A AM352_RS11530 PF03989 DNA gyrase C-terminal domain, beta-propeller AM352_RS11535 PF02803 Thiolase, C-terminal domain AM352_RS11535 PF00108 Thiolase, N-terminal domain AM352_RS11540 PF02667 Short chain fatty acid transporter AM352_RS11545 PF01144 Coenzyme A transferase AM352_RS11550 PF01144 Coenzyme A transferase AM352_RS11555 PF00158 Sigma-54 interaction domain AM352_RS11555 PF02954 Bacterial regulatory protein, Fis family AM352_RS11555 PF00072 Response regulator receiver domain AM352_RS11560 PF00989 PAS fold AM352_RS11560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS11560 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS11565 PF00072 Response regulator receiver domain AM352_RS11565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS11565 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS11565 PF09456 RcsC Alpha-Beta-Loop (ABL) AM352_RS11570 PF00072 Response regulator receiver domain AM352_RS11570 PF00196 Bacterial regulatory proteins, luxR family AM352_RS11575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS11575 PF01627 Hpt domain AM352_RS11575 PF16359 RcsD-ABL domain AM352_RS11585 PF00267 Gram-negative porin AM352_RS11595 PF02424 ApbE family AM352_RS11600 PF12833 Helix-turn-helix domain AM352_RS11600 PF02805 Metal binding domain of Ada AM352_RS11600 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM352_RS11600 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM352_RS11605 PF13532 2OG-Fe(II) oxygenase superfamily AM352_RS11610 PF00005 ABC transporter AM352_RS11615 PF00571 CBS domain AM352_RS11615 PF01769 Divalent cation transporter AM352_RS11615 PF03448 MgtE intracellular N domain AM352_RS11620 PF06039 Malate:quinone oxidoreductase (Mqo) AM352_RS11625 PF03974 Ecotin AM352_RS11630 PF12800 4Fe-4S binding domain AM352_RS11630 PF13187 4Fe-4S dicluster domain AM352_RS11630 PF00037 4Fe-4S binding domain AM352_RS11635 PF03927 NapD protein AM352_RS11640 PF00384 Molybdopterin oxidoreductase AM352_RS11640 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS11640 PF01568 Molydopterin dinucleotide binding domain AM352_RS11645 PF12838 4Fe-4S dicluster domain AM352_RS11645 PF12800 4Fe-4S binding domain AM352_RS11650 PF13237 4Fe-4S dicluster domain AM352_RS11650 PF12801 4Fe-4S binding domain AM352_RS11655 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) AM352_RS11660 PF03264 NapC/NirT cytochrome c family, N-terminal region AM352_RS11665 PF00005 ABC transporter AM352_RS11670 PF03379 CcmB protein AM352_RS11675 PF01578 Cytochrome C assembly protein AM352_RS11680 PF04995 Heme exporter protein D (CcmD) AM352_RS11685 PF03100 CcmE AM352_RS11690 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal AM352_RS11690 PF01578 Cytochrome C assembly protein AM352_RS11695 PF08534 Redoxin AM352_RS11700 PF03918 Cytochrome C biogenesis protein AM352_RS11705 PF00072 Response regulator receiver domain AM352_RS11705 PF00196 Bacterial regulatory proteins, luxR family AM352_RS11720 PF11893 Domain of unknown function (DUF3413) AM352_RS11720 PF00884 Sulfatase AM352_RS11725 PF07208 Protein of unknown function (DUF1414) AM352_RS11730 PF04245 37-kD nucleoid-associated bacterial protein AM352_RS11735 PF01386 Ribosomal L25p family AM352_RS11740 PF00271 Helicase conserved C-terminal domain AM352_RS11740 PF04851 Type III restriction enzyme, res subunit AM352_RS11745 PF00849 RNA pseudouridylate synthase AM352_RS11745 PF01479 S4 domain AM352_RS11750 PF07690 Major Facilitator Superfamily AM352_RS11755 PF13989 YejG-like protein AM352_RS11760 PF00005 ABC transporter AM352_RS11760 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS11765 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS11765 PF12911 N-terminal TM domain of oligopeptide transport permease C AM352_RS11770 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS11775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS11780 PF12792 CSS motif domain associated with EAL AM352_RS11780 PF00563 EAL domain AM352_RS11785 PF00877 NlpC/P60 family AM352_RS11795 PF01569 PAP2 superfamily AM352_RS11800 PF02492 CobW/HypB/UreG, nucleotide-binding domain AM352_RS11800 PF07683 Cobalamin synthesis protein cobW C-terminal domain AM352_RS11805 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS11805 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS11810 PF03786 D-mannonate dehydratase (UxuA) AM352_RS11815 PF09285 Elongation factor P, C-terminal AM352_RS11815 PF01132 Elongation factor P (EF-P) OB domain AM352_RS11815 PF08207 Elongation factor P (EF-P) KOW-like domain AM352_RS11820 PF03692 Putative zinc- or iron-chelating domain AM352_RS11825 PF07690 Major Facilitator Superfamily AM352_RS11830 PF00381 PTS HPr component phosphorylation site AM352_RS11830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS11835 PF00294 pfkB family carbohydrate kinase AM352_RS11840 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS11840 PF02378 Phosphotransferase system, EIIC AM352_RS11845 PF00294 pfkB family carbohydrate kinase AM352_RS11850 PF04227 Indigoidine synthase A like protein AM352_RS11855 PF01773 Na+ dependent nucleoside transporter N-terminus AM352_RS11855 PF07662 Na+ dependent nucleoside transporter C-terminus AM352_RS11860 PF00294 pfkB family carbohydrate kinase AM352_RS11865 PF01261 Xylose isomerase-like TIM barrel AM352_RS11870 PF03601 Conserved hypothetical protein 698 AM352_RS11875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS11875 PF03466 LysR substrate binding domain AM352_RS11880 PF00324 Amino acid permease AM352_RS11885 PF07715 TonB-dependent Receptor Plug Domain AM352_RS11885 PF00593 TonB dependent receptor AM352_RS11890 PF07690 Major Facilitator Superfamily AM352_RS11895 PF18429 Domain of unknown function (DUF5609) AM352_RS11900 PF03313 Serine dehydratase alpha chain AM352_RS11900 PF03315 Serine dehydratase beta chain AM352_RS11910 PF00756 Putative esterase AM352_RS11915 PF01227 GTP cyclohydrolase I AM352_RS11920 PF04235 Protein of unknown function (DUF418) AM352_RS11930 PF00356 Bacterial regulatory proteins, lacI family AM352_RS11935 PF13407 Periplasmic binding protein domain AM352_RS11940 PF00005 ABC transporter AM352_RS11945 PF02653 Branched-chain amino acid transport system / permease component AM352_RS11950 PF10808 Protein of unknown function (DUF2542) AM352_RS11955 PF02698 DUF218 domain AM352_RS11960 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM352_RS11960 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region AM352_RS11965 PF04172 LrgB-like family AM352_RS11970 PF03788 LrgA family AM352_RS11975 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS11975 PF03466 LysR substrate binding domain AM352_RS11980 PF07690 Major Facilitator Superfamily AM352_RS11985 PF07883 Cupin domain AM352_RS11990 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM352_RS11995 PF02798 Glutathione S-transferase, N-terminal domain AM352_RS11995 PF14497 Glutathione S-transferase, C-terminal domain AM352_RS12000 PF01494 FAD binding domain AM352_RS12005 PF01207 Dihydrouridine synthase (Dus) AM352_RS12010 PF02321 Outer membrane efflux protein AM352_RS12015 PF09335 SNARE associated Golgi protein AM352_RS12020 PF04893 Yip1 domain AM352_RS12025 PF00768 D-alanyl-D-alanine carboxypeptidase AM352_RS12030 PF01565 FAD binding domain AM352_RS12030 PF09330 D-lactate dehydrogenase, membrane binding AM352_RS12040 PF14310 Fibronectin type III-like domain AM352_RS12040 PF01915 Glycosyl hydrolase family 3 C-terminal domain AM352_RS12040 PF00933 Glycosyl hydrolase family 3 N terminal domain AM352_RS12045 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM352_RS12050 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS12055 PF00005 ABC transporter AM352_RS12060 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS12070 PF13411 MerR HTH family regulatory protein AM352_RS12075 PF06580 Histidine kinase AM352_RS12075 PF07694 5TMR of 5TMR-LYT AM352_RS12080 PF04397 LytTr DNA-binding domain AM352_RS12080 PF00072 Response regulator receiver domain AM352_RS12085 PF07308 Protein of unknown function (DUF1456) AM352_RS12090 PF09334 tRNA synthetases class I (M) AM352_RS12090 PF01588 Putative tRNA binding domain AM352_RS12095 PF10609 NUBPL iron-transfer P-loop NTPase AM352_RS12100 PF10836 Protein of unknown function (DUF2574) AM352_RS12110 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS12110 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS12115 PF13953 PapC C-terminal domain AM352_RS12115 PF13954 PapC N-terminal domain AM352_RS12115 PF00577 Outer membrane usher protein AM352_RS12125 PF11776 Nickel/cobalt transporter regulator AM352_RS12130 PF02110 Hydroxyethylthiazole kinase family AM352_RS12135 PF08543 Phosphomethylpyrimidine kinase AM352_RS12140 PF07702 UTRA domain AM352_RS12140 PF00392 Bacterial regulatory proteins, gntR family AM352_RS12145 PF00294 pfkB family carbohydrate kinase AM352_RS12150 PF03747 ADP-ribosylglycohydrolase AM352_RS12155 PF03825 Nucleoside H+ symporter AM352_RS12160 PF01791 DeoC/LacD family aldolase AM352_RS12165 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS12165 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS12170 PF00106 short chain dehydrogenase AM352_RS12175 PF00356 Bacterial regulatory proteins, lacI family AM352_RS12180 PF04198 Putative sugar-binding domain AM352_RS12185 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS12185 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS12190 PF00370 FGGY family of carbohydrate kinases, N-terminal domain AM352_RS12190 PF02782 FGGY family of carbohydrate kinases, C-terminal domain AM352_RS12195 PF07690 Major Facilitator Superfamily AM352_RS12200 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS12205 PF00781 Diacylglycerol kinase catalytic domain AM352_RS12220 PF01136 Peptidase family U32 AM352_RS12220 PF16325 Peptidase family U32 C-terminal domain AM352_RS12225 PF00072 Response regulator receiver domain AM352_RS12225 PF00486 Transcriptional regulatory protein, C terminal AM352_RS12230 PF00672 HAMP domain AM352_RS12230 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS12230 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS12235 PF07690 Major Facilitator Superfamily AM352_RS12240 PF00873 AcrB/AcrD/AcrF family AM352_RS12245 PF00873 AcrB/AcrD/AcrF family AM352_RS12250 PF13533 Biotin-lipoyl like AM352_RS12255 PF00012 Hsp70 protein AM352_RS12265 PF06029 AlkA N-terminal domain AM352_RS12265 PF00730 HhH-GPD superfamily base excision DNA repair protein AM352_RS12270 PF08448 PAS fold AM352_RS12270 PF05231 MASE1 AM352_RS12270 PF08447 PAS fold AM352_RS12270 PF00563 EAL domain AM352_RS12270 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS12270 PF13426 PAS domain AM352_RS12275 PF00485 Phosphoribulokinase / Uridine kinase family AM352_RS12280 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) AM352_RS12285 PF05170 AsmA family AM352_RS12290 PF00571 CBS domain AM352_RS12290 PF03741 Integral membrane protein TerC family AM352_RS12290 PF03471 Transporter associated domain AM352_RS12300 PF10531 SLBB domain AM352_RS12300 PF18412 Outer-membrane lipoprotein Wza C-terminal domain AM352_RS12300 PF02563 Polysaccharide biosynthesis/export protein AM352_RS12305 PF01451 Low molecular weight phosphotyrosine protein phosphatase AM352_RS12310 PF13614 AAA domain AM352_RS12310 PF02706 Chain length determinant protein AM352_RS12310 PF13807 G-rich domain on putative tyrosine kinase AM352_RS12315 PF00535 Glycosyl transferase family 2 AM352_RS12320 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS12325 PF13439 Glycosyltransferase Family 4 AM352_RS12325 PF00534 Glycosyl transferases group 1 AM352_RS12335 PF00535 Glycosyl transferase family 2 AM352_RS12340 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS12345 PF16363 GDP-mannose 4,6 dehydratase AM352_RS12350 PF01370 NAD dependent epimerase/dehydratase family AM352_RS12355 PF00293 NUDIX domain AM352_RS12360 PF13579 Glycosyl transferase 4-like domain AM352_RS12360 PF00534 Glycosyl transferases group 1 AM352_RS12365 PF00483 Nucleotidyl transferase AM352_RS12365 PF01050 Mannose-6-phosphate isomerase AM352_RS12370 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM352_RS12370 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM352_RS12370 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM352_RS12370 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM352_RS12375 PF02397 Bacterial sugar transferase AM352_RS12385 PF04230 Polysaccharide pyruvyl transferase AM352_RS12390 PF13439 Glycosyltransferase Family 4 AM352_RS12390 PF00534 Glycosyl transferases group 1 AM352_RS12400 PF00483 Nucleotidyl transferase AM352_RS12430 PF03275 UDP-galactopyranose mutase AM352_RS12435 PF02397 Bacterial sugar transferase AM352_RS12440 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain AM352_RS12440 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase AM352_RS12450 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain AM352_RS12450 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain AM352_RS12450 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain AM352_RS12455 PF02706 Chain length determinant protein AM352_RS12460 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase AM352_RS12460 PF01502 Phosphoribosyl-AMP cyclohydrolase AM352_RS12465 PF00977 Histidine biosynthesis protein AM352_RS12470 PF00977 Histidine biosynthesis protein AM352_RS12475 PF00117 Glutamine amidotransferase class-I AM352_RS12480 PF00475 Imidazoleglycerol-phosphate dehydratase AM352_RS12485 PF00155 Aminotransferase class I and II AM352_RS12490 PF00815 Histidinol dehydrogenase AM352_RS12495 PF01634 ATP phosphoribosyltransferase AM352_RS12495 PF08029 HisG, C-terminal domain AM352_RS12505 PF01370 NAD dependent epimerase/dehydratase family AM352_RS12510 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS12510 PF03466 LysR substrate binding domain AM352_RS12520 PF13520 Amino acid permease AM352_RS12525 PF00929 Exonuclease AM352_RS12525 PF08411 Exonuclease C-terminal AM352_RS12530 PF07943 Penicillin-binding protein 5, C-terminal domain AM352_RS12530 PF00768 D-alanyl-D-alanine carboxypeptidase AM352_RS12535 PF06445 GyrI-like small molecule binding domain AM352_RS12540 PF04632 Fusaric acid resistance protein family AM352_RS12545 PF04363 Protein of unknown function (DUF496) AM352_RS12550 PF00288 GHMP kinases N terminal domain AM352_RS12555 PF00871 Acetokinase family AM352_RS12560 PF10662 Ethanolamine utilisation - propanediol utilisation AM352_RS12565 PF00936 BMC domain AM352_RS12575 PF13237 4Fe-4S dicluster domain AM352_RS12575 PF13375 RnfC Barrel sandwich hybrid domain AM352_RS12575 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM352_RS12575 PF10531 SLBB domain AM352_RS12580 PF00465 Iron-containing alcohol dehydrogenase AM352_RS12580 PF00171 Aldehyde dehydrogenase family AM352_RS12585 PF00171 Aldehyde dehydrogenase family AM352_RS12590 PF01923 Cobalamin adenosyltransferase AM352_RS12595 PF03319 Ethanolamine utilisation protein EutN/carboxysome AM352_RS12605 PF06130 Phosphate propanoyltransferase AM352_RS12615 PF00936 BMC domain AM352_RS12625 PF08841 Diol dehydratase reactivase ATPase-like domain AM352_RS12625 PF18427 DD-reactivating factor swiveling domain AM352_RS12630 PF02287 Dehydratase small subunit AM352_RS12635 PF02288 Dehydratase medium subunit AM352_RS12640 PF02286 Dehydratase large subunit AM352_RS12645 PF00936 BMC domain AM352_RS12650 PF00936 BMC domain AM352_RS12655 PF00230 Major intrinsic protein AM352_RS12660 PF12833 Helix-turn-helix domain AM352_RS12660 PF10114 Sensory domain found in PocR AM352_RS12665 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM352_RS12665 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM352_RS12670 PF03186 CobD/Cbib protein AM352_RS12675 PF02570 Precorrin-8X methylmutase AM352_RS12680 PF01888 CbiD AM352_RS12685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM352_RS12690 PF05175 Methyltransferase small domain AM352_RS12695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM352_RS12700 PF11761 Cobalamin biosynthesis central region AM352_RS12700 PF01890 Cobalamin synthesis G C-terminus AM352_RS12700 PF11760 Cobalamin synthesis G N-terminal AM352_RS12705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM352_RS12710 PF02571 Precorrin-6x reductase CbiJ/CobK AM352_RS12715 PF06180 Cobalt chelatase (CbiK) AM352_RS12720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases AM352_RS12725 PF01891 Cobalt uptake substrate-specific transmembrane region AM352_RS12730 PF02553 Cobalt transport protein component CbiN AM352_RS12735 PF02361 Cobalt transport protein AM352_RS12740 PF00005 ABC transporter AM352_RS12745 PF07685 CobB/CobQ-like glutamine amidotransferase domain AM352_RS12750 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase AM352_RS12755 PF02654 Cobalamin-5-phosphate synthase AM352_RS12760 PF02277 Phosphoribosyltransferase AM352_RS12765 PF03734 L,D-transpeptidase catalytic domain AM352_RS12765 PF17969 L,D-transpeptidase C-terminal domain AM352_RS12770 PF03466 LysR substrate binding domain AM352_RS12770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS12800 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM352_RS12810 PF01032 FecCD transport family AM352_RS12815 PF13649 Methyltransferase domain AM352_RS12835 PF01554 MatE AM352_RS12845 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) AM352_RS12855 PF00005 ABC transporter AM352_RS12860 PF01638 HxlR-like helix-turn-helix AM352_RS12880 PF01321 Creatinase/Prolidase N-terminal domain AM352_RS12880 PF00557 Metallopeptidase family M24 AM352_RS12885 PF01048 Phosphorylase superfamily AM352_RS12885 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus AM352_RS12890 PF00083 Sugar (and other) transporter AM352_RS12890 PF07690 Major Facilitator Superfamily AM352_RS12895 PF00005 ABC transporter AM352_RS12905 PF01032 FecCD transport family AM352_RS12915 PF03466 LysR substrate binding domain AM352_RS12915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS12920 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS12920 PF03466 LysR substrate binding domain AM352_RS12930 PF06167 Glucose-regulated metallo-peptidase M90 AM352_RS12940 PF00419 Fimbrial protein AM352_RS12945 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS12945 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS12950 PF13953 PapC C-terminal domain AM352_RS12950 PF00577 Outer membrane usher protein AM352_RS12950 PF13954 PapC N-terminal domain AM352_RS12955 PF00419 Fimbrial protein AM352_RS12980 PF00593 TonB dependent receptor AM352_RS12980 PF07715 TonB-dependent Receptor Plug Domain AM352_RS12985 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) AM352_RS12990 PF04183 IucA / IucC family AM352_RS12990 PF06276 Ferric iron reductase FhuF-like transporter AM352_RS13000 PF06276 Ferric iron reductase FhuF-like transporter AM352_RS13000 PF04183 IucA / IucC family AM352_RS13015 PF00267 Gram-negative porin AM352_RS13020 PF01966 HD domain AM352_RS13025 PF18284 DNA methylase N-terminal domain AM352_RS13025 PF00145 C-5 cytosine-specific DNA methylase AM352_RS13030 PF03852 DNA mismatch endonuclease Vsr AM352_RS13035 PF00892 EamA-like transporter family AM352_RS13040 PF05661 Protein of unknown function (DUF808) AM352_RS13045 PF09926 Uncharacterized small protein (DUF2158) AM352_RS13050 PF17151 Periplasmic sensor domain AM352_RS13050 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS13055 PF10733 Protein of unknown function (DUF2525) AM352_RS13060 PF10781 Dextransucrase DSRB AM352_RS13065 PF00196 Bacterial regulatory proteins, luxR family AM352_RS13070 PF01311 Bacterial export proteins, family 1 AM352_RS13075 PF01313 Bacterial export proteins, family 3 AM352_RS13080 PF00813 FliP family AM352_RS13085 PF04347 Flagellar biosynthesis protein, FliO AM352_RS13090 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM352_RS13090 PF16973 Flagellar motor switch protein FliN N-terminal AM352_RS13095 PF02154 Flagellar motor switch protein FliM AM352_RS13095 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM352_RS13100 PF03748 Flagellar basal body-associated protein FliL AM352_RS13105 PF02120 Flagellar hook-length control protein FliK AM352_RS13110 PF02050 Flagellar FliJ protein AM352_RS13115 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM352_RS13115 PF18269 T3SS EscN ATPase C-terminal domain AM352_RS13120 PF02108 Flagellar assembly protein FliH AM352_RS13125 PF01706 FliG C-terminal domain AM352_RS13125 PF14842 FliG N-terminal domain AM352_RS13125 PF14841 FliG middle domain AM352_RS13130 PF01514 Secretory protein of YscJ/FliF family AM352_RS13130 PF08345 Flagellar M-ring protein C-terminal AM352_RS13135 PF02049 Flagellar hook-basal body complex protein FliE AM352_RS13140 PF01206 Sulfurtransferase TusA AM352_RS13145 PF04143 Sulphur transport AM352_RS13150 PF13987 YedD-like protein AM352_RS13155 PF00128 Alpha amylase, catalytic domain AM352_RS13155 PF02806 Alpha amylase, C-terminal all-beta domain AM352_RS13160 PF05400 Flagellar protein FliT AM352_RS13165 PF02561 Flagellar protein FliS AM352_RS13175 PF00669 Bacterial flagellin N-terminal helical region AM352_RS13175 PF00700 Bacterial flagellin C-terminal helical region AM352_RS13180 PF10119 Predicted methyltransferase regulatory domain AM352_RS13180 PF13847 Methyltransferase domain AM352_RS13200 PF08889 WbqC-like protein family AM352_RS13205 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family AM352_RS13210 PF04542 Sigma-70 region 2 AM352_RS13210 PF04539 Sigma-70 region 3 AM352_RS13210 PF04545 Sigma-70, region 4 AM352_RS13215 PF02899 Phage integrase, N-terminal SAM-like domain AM352_RS13220 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS13225 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS13230 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS13235 PF00005 ABC transporter AM352_RS13240 PF03472 Autoinducer binding domain AM352_RS13240 PF00196 Bacterial regulatory proteins, luxR family AM352_RS13245 PF10769 Protein of unknown function (DUF2594) AM352_RS13250 PF00196 Bacterial regulatory proteins, luxR family AM352_RS13250 PF00072 Response regulator receiver domain AM352_RS13255 PF02151 UvrB/uvrC motif AM352_RS13255 PF08459 UvrC Helix-hairpin-helix N-terminal AM352_RS13255 PF01541 GIY-YIG catalytic domain AM352_RS13260 PF01066 CDP-alcohol phosphatidyltransferase AM352_RS13280 PF03695 Uncharacterised protein family (UPF0149) AM352_RS13280 PF02810 SEC-C motif AM352_RS13285 PF03222 Tryptophan/tyrosine permease family AM352_RS13290 PF10678 Protein of unknown function (DUF2492) AM352_RS13295 PF00210 Ferritin-like domain AM352_RS13300 PF13992 YecR-like lipoprotein AM352_RS13310 PF10964 Protein of unknown function (DUF2766) AM352_RS13315 PF00210 Ferritin-like domain AM352_RS13330 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM352_RS13335 PF00005 ABC transporter AM352_RS13340 PF02653 Branched-chain amino acid transport system / permease component AM352_RS13345 PF02358 Trehalose-phosphatase AM352_RS13350 PF00982 Glycosyltransferase family 20 AM352_RS13355 PF00582 Universal stress protein family AM352_RS13365 PF05247 Flagellar transcriptional activator (FlhD) AM352_RS13370 PF05280 Flagellar transcriptional activator (FlhC) AM352_RS13375 PF01618 MotA/TolQ/ExbB proton channel family AM352_RS13380 PF00691 OmpA family AM352_RS13380 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM352_RS13385 PF01584 CheW-like domain AM352_RS13385 PF02895 Signal transducing histidine kinase, homodimeric domain AM352_RS13385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS13385 PF09078 CheY binding AM352_RS13385 PF01627 Hpt domain AM352_RS13390 PF01584 CheW-like domain AM352_RS13395 PF00375 Sodium:dicarboxylate symporter family AM352_RS13400 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS13400 PF02203 Tar ligand binding domain homologue AM352_RS13400 PF00672 HAMP domain AM352_RS13405 PF02203 Tar ligand binding domain homologue AM352_RS13405 PF00672 HAMP domain AM352_RS13405 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS13410 PF01739 CheR methyltransferase, SAM binding domain AM352_RS13410 PF03705 CheR methyltransferase, all-alpha domain AM352_RS13415 PF00072 Response regulator receiver domain AM352_RS13415 PF01339 CheB methylesterase AM352_RS13420 PF00072 Response regulator receiver domain AM352_RS13425 PF04344 Chemotaxis phosphatase, CheZ AM352_RS13430 PF00419 Fimbrial protein AM352_RS13435 PF13953 PapC C-terminal domain AM352_RS13435 PF00577 Outer membrane usher protein AM352_RS13435 PF13954 PapC N-terminal domain AM352_RS13440 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS13440 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS13445 PF00419 Fimbrial protein AM352_RS13455 PF01312 FlhB HrpN YscU SpaS Family AM352_RS13460 PF00771 FHIPEP family AM352_RS13465 PF06366 Flagellar protein FlhE AM352_RS13475 PF07470 Glycosyl Hydrolase Family 88 AM352_RS13480 PF03717 Penicillin-binding Protein dimerisation domain AM352_RS13480 PF00905 Penicillin binding protein transpeptidase domain AM352_RS13485 PF00750 tRNA synthetases class I (R) AM352_RS13485 PF05746 DALR anticodon binding domain AM352_RS13485 PF03485 Arginyl tRNA synthetase N terminal domain AM352_RS13490 PF06185 YecM protein AM352_RS13495 PF03932 CutC family AM352_RS13505 PF08003 Protein of unknown function (DUF1698) AM352_RS13510 PF13649 Methyltransferase domain AM352_RS13515 PF01124 MAPEG family AM352_RS13520 PF01904 Protein of unknown function DUF72 AM352_RS13525 PF00857 Isochorismatase family AM352_RS13530 PF02938 GAD domain AM352_RS13530 PF01336 OB-fold nucleic acid binding domain AM352_RS13530 PF00152 tRNA synthetases class II (D, K and N) AM352_RS13535 PF00293 NUDIX domain AM352_RS13540 PF01709 Transcriptional regulator AM352_RS13545 PF02075 Crossover junction endodeoxyribonuclease RuvC AM352_RS13550 PF07499 RuvA, C-terminal domain AM352_RS13550 PF01330 RuvA N terminal domain AM352_RS13555 PF05496 Holliday junction DNA helicase RuvB P-loop domain AM352_RS13555 PF17864 RuvB AAA lid domain AM352_RS13555 PF05491 RuvB C-terminal winged helix domain AM352_RS13560 PF00950 ABC 3 transport family AM352_RS13565 PF00005 ABC transporter AM352_RS13570 PF01297 Zinc-uptake complex component A periplasmic AM352_RS13575 PF08525 Opacity-associated protein A N-terminal motif AM352_RS13575 PF01476 LysM domain AM352_RS13575 PF01551 Peptidase family M23 AM352_RS13580 PF03279 Bacterial lipid A biosynthesis acyltransferase AM352_RS13585 PF02887 Pyruvate kinase, alpha/beta domain AM352_RS13585 PF00224 Pyruvate kinase, barrel domain AM352_RS13590 PF01418 Helix-turn-helix domain, rpiR family AM352_RS13590 PF01380 SIS domain AM352_RS13595 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain AM352_RS13595 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain AM352_RS13600 PF00920 Dehydratase family AM352_RS13605 PF01081 KDPG and KHG aldolase AM352_RS13610 PF02222 ATP-grasp domain AM352_RS13615 PF07130 YebG protein AM352_RS13620 PF13995 YebF-like protein AM352_RS13625 PF04391 Protein of unknown function (DUF533) AM352_RS13630 PF00326 Prolyl oligopeptidase family AM352_RS13630 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain AM352_RS13635 PF00929 Exonuclease AM352_RS13640 PF00795 Carbon-nitrogen hydrolase AM352_RS13645 PF06440 DNA polymerase III, theta subunit AM352_RS13650 PF04234 CopC domain AM352_RS13655 PF05425 Copper resistance protein D AM352_RS13660 PF10709 Protein of unknown function (DUF2511) AM352_RS13670 PF00593 TonB dependent receptor AM352_RS13670 PF07715 TonB-dependent Receptor Plug Domain AM352_RS13675 PF00149 Calcineurin-like phosphoesterase AM352_RS13680 PF07358 Protein of unknown function (DUF1482) AM352_RS13685 PF07351 Protein of unknown function (DUF1480) AM352_RS13690 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF AM352_RS13690 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF AM352_RS13690 PF01189 16S rRNA methyltransferase RsmB/F AM352_RS13695 PF02470 MlaD protein AM352_RS13700 PF04403 Paraquat-inducible protein A AM352_RS13705 PF13185 GAF domain AM352_RS13710 PF17516 ProQ C-terminal domain AM352_RS13710 PF04352 ProQ/FINO family AM352_RS13715 PF17804 Tail specific protease N-terminal domain AM352_RS13715 PF03572 Peptidase family S41 AM352_RS13715 PF11818 C-terminal domain of tail specific protease (DUF3340) AM352_RS13715 PF00595 PDZ domain AM352_RS13720 PF01435 Peptidase family M48 AM352_RS13725 PF07690 Major Facilitator Superfamily AM352_RS13730 PF01614 Bacterial transcriptional regulator AM352_RS13730 PF09339 IclR helix-turn-helix domain AM352_RS13735 PF13996 YobH-like protein AM352_RS13740 PF13998 MgrB protein AM352_RS13745 PF13974 YebO-like protein AM352_RS13750 PF10736 Protein of unknown function (DUF2627) AM352_RS13755 PF00313 'Cold-shock' DNA-binding domain AM352_RS13760 PF00905 Penicillin binding protein transpeptidase domain AM352_RS13760 PF03717 Penicillin-binding Protein dimerisation domain AM352_RS13765 PF13847 Methyltransferase domain AM352_RS13775 PF06173 Protein of unknown function (DUF986) AM352_RS13780 PF03613 PTS system mannose/fructose/sorbose family IID component AM352_RS13785 PF03609 PTS system sorbose-specific iic component AM352_RS13790 PF03830 PTS system sorbose subfamily IIB component AM352_RS13790 PF03610 PTS system fructose IIA component AM352_RS13805 PF03741 Integral membrane protein TerC family AM352_RS13805 PF03471 Transporter associated domain AM352_RS13810 PF00563 EAL domain AM352_RS13810 PF12792 CSS motif domain associated with EAL AM352_RS13815 PF03315 Serine dehydratase beta chain AM352_RS13815 PF03313 Serine dehydratase alpha chain AM352_RS13820 PF00293 NUDIX domain AM352_RS13825 PF04715 Anthranilate synthase component I, N terminal region AM352_RS13825 PF00425 chorismate binding enzyme AM352_RS13830 PF03701 Uncharacterised protein family (UPF0181) AM352_RS13835 PF01042 Endoribonuclease L-PSP AM352_RS13840 PF04851 Type III restriction enzyme, res subunit AM352_RS13840 PF13307 Helicase C-terminal domain AM352_RS13845 PF00814 Glycoprotease family AM352_RS13850 PF03843 Outer membrane lipoprotein Slp family AM352_RS13860 PF00501 AMP-binding enzyme AM352_RS13860 PF13193 AMP-binding enzyme C-terminal domain AM352_RS13865 PF01612 3'-5' exonuclease AM352_RS13865 PF00570 HRDC domain AM352_RS13870 PF00180 Isocitrate/isopropylmalate dehydrogenase AM352_RS13875 PF03466 LysR substrate binding domain AM352_RS13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS13880 PF03776 Septum formation topological specificity factor MinE AM352_RS13885 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain AM352_RS13890 PF05209 Septum formation inhibitor MinC, N-terminal domain AM352_RS13890 PF03775 Septum formation inhibitor MinC, C-terminal domain AM352_RS13895 PF05166 YcgL domain AM352_RS13900 PF01557 Fumarylacetoacetate (FAA) hydrolase family AM352_RS13905 PF03692 Putative zinc- or iron-chelating domain AM352_RS13915 PF02600 Disulfide bond formation protein DsbB AM352_RS13920 PF06450 Bacterial Na+/H+ antiporter B (NhaB) AM352_RS13925 PF07840 FadR C-terminal domain AM352_RS13925 PF00392 Bacterial regulatory proteins, gntR family AM352_RS13930 PF04293 SpoVR like protein AM352_RS13935 PF01266 FAD dependent oxidoreductase AM352_RS13940 PF00842 Alanine racemase, C-terminal domain AM352_RS13940 PF01168 Alanine racemase, N-terminal domain AM352_RS13945 PF03471 Transporter associated domain AM352_RS13945 PF02080 TrkA-C domain AM352_RS13945 PF00999 Sodium/hydrogen exchanger family AM352_RS13950 PF17676 LD-carboxypeptidase C-terminal domain AM352_RS13950 PF02016 LD-carboxypeptidase N-terminal domain AM352_RS13955 PF01464 Transglycosylase SLT domain AM352_RS13960 PF07317 Flagellar regulator YcgR AM352_RS13960 PF07238 PilZ domain AM352_RS13965 PF04226 Transglycosylase associated protein AM352_RS13970 PF07715 TonB-dependent Receptor Plug Domain AM352_RS13970 PF00593 TonB dependent receptor AM352_RS13980 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM352_RS13980 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM352_RS13990 PF00005 ABC transporter AM352_RS13995 PF01032 FecCD transport family AM352_RS14000 PF01497 Periplasmic binding protein AM352_RS14005 PF01204 Trehalase AM352_RS14010 PF00381 PTS HPr component phosphorylation site AM352_RS14010 PF00391 PEP-utilising enzyme, mobile domain AM352_RS14010 PF05524 PEP-utilising enzyme, N-terminal AM352_RS14010 PF03610 PTS system fructose IIA component AM352_RS14015 PF02734 DAK2 domain AM352_RS14020 PF02733 Dak1 domain AM352_RS14025 PF15977 Winged helix-turn-helix DNA binding AM352_RS14040 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS14040 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS14045 PF13954 PapC N-terminal domain AM352_RS14045 PF00577 Outer membrane usher protein AM352_RS14045 PF13953 PapC C-terminal domain AM352_RS14055 PF00419 Fimbrial protein AM352_RS14065 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS14065 PF03466 LysR substrate binding domain AM352_RS14070 PF00384 Molybdopterin oxidoreductase AM352_RS14075 PF01654 Cytochrome bd terminal oxidase subunit I AM352_RS14080 PF02322 Cytochrome bd terminal oxidase subunit II AM352_RS14090 PF04055 Radical SAM superfamily AM352_RS14090 PF06463 Molybdenum Cofactor Synthesis C AM352_RS14095 PF01062 Bestrophin, RFP-TM, chloride channel AM352_RS14105 PF08659 KR domain AM352_RS14105 PF00550 Phosphopantetheine attachment site AM352_RS14105 PF02801 Beta-ketoacyl synthase, C-terminal domain AM352_RS14105 PF00109 Beta-ketoacyl synthase, N-terminal domain AM352_RS14105 PF16197 Ketoacyl-synthetase C-terminal extension AM352_RS14105 PF00107 Zinc-binding dehydrogenase AM352_RS14105 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS14105 PF00698 Acyl transferase domain AM352_RS14105 PF14765 Polyketide synthase dehydratase AM352_RS14115 PF02567 Phenazine biosynthesis-like protein AM352_RS14120 PF00356 Bacterial regulatory proteins, lacI family AM352_RS14130 PF00171 Aldehyde dehydrogenase family AM352_RS14135 PF00107 Zinc-binding dehydrogenase AM352_RS14135 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS14145 PF00593 TonB dependent receptor AM352_RS14145 PF07715 TonB-dependent Receptor Plug Domain AM352_RS14150 PF00501 AMP-binding enzyme AM352_RS14150 PF13193 AMP-binding enzyme C-terminal domain AM352_RS14155 PF00975 Thioesterase domain AM352_RS14165 PF00550 Phosphopantetheine attachment site AM352_RS14165 PF00109 Beta-ketoacyl synthase, N-terminal domain AM352_RS14165 PF16197 Ketoacyl-synthetase C-terminal extension AM352_RS14165 PF00668 Condensation domain AM352_RS14165 PF00698 Acyl transferase domain AM352_RS14165 PF02801 Beta-ketoacyl synthase, C-terminal domain AM352_RS14170 PF00668 Condensation domain AM352_RS14170 PF08242 Methyltransferase domain AM352_RS14170 PF00550 Phosphopantetheine attachment site AM352_RS14170 PF00501 AMP-binding enzyme AM352_RS14180 PF08021 Siderophore-interacting FAD-binding domain AM352_RS14180 PF04954 Siderophore-interacting protein AM352_RS14180 PF00664 ABC transporter transmembrane region AM352_RS14180 PF00005 ABC transporter AM352_RS14185 PF00005 ABC transporter AM352_RS14185 PF00664 ABC transporter transmembrane region AM352_RS14190 PF07690 Major Facilitator Superfamily AM352_RS14195 PF00425 chorismate binding enzyme AM352_RS14210 PF06071 Protein of unknown function (DUF933) AM352_RS14210 PF01926 50S ribosome-binding GTPase AM352_RS14215 PF01195 Peptidyl-tRNA hydrolase AM352_RS14220 PF10762 Protein of unknown function (DUF2583) AM352_RS14225 PF02167 Cytochrome C1 family AM352_RS14230 PF00033 Cytochrome b/b6/petB AM352_RS14230 PF00032 Cytochrome b(C-terminal)/b6/petD AM352_RS14235 PF00355 Rieske [2Fe-2S] domain AM352_RS14235 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal AM352_RS14240 PF00127 Copper binding proteins, plastocyanin/azurin family AM352_RS14245 PF00005 ABC transporter AM352_RS14250 PF01032 FecCD transport family AM352_RS14265 PF00916 Sulfate permease family AM352_RS14265 PF01740 STAS domain AM352_RS14270 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase AM352_RS14270 PF14572 Phosphoribosyl synthetase-associated domain AM352_RS14275 PF00288 GHMP kinases N terminal domain AM352_RS14275 PF08544 GHMP kinases C terminal AM352_RS14280 PF03550 Outer membrane lipoprotein LolB AM352_RS14285 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain AM352_RS14285 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain AM352_RS14285 PF01488 Shikimate / quinate 5-dehydrogenase AM352_RS14290 PF00472 RF-1 domain AM352_RS14290 PF03462 PCRF domain AM352_RS14295 PF17827 PrmC N-terminal domain AM352_RS14295 PF13847 Methyltransferase domain AM352_RS14300 PF04247 Invasion gene expression up-regulator, SirB AM352_RS14305 PF13369 Transglutaminase-like superfamily AM352_RS14310 PF00793 DAHP synthetase I family AM352_RS14315 PF01699 Sodium/calcium exchanger protein AM352_RS14320 PF06150 ChaB AM352_RS14325 PF04752 ChaC-like protein AM352_RS14335 PF02203 Tar ligand binding domain homologue AM352_RS14335 PF00672 HAMP domain AM352_RS14335 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS14340 PF02635 DsrE/DsrF-like family AM352_RS14345 PF03861 ANTAR domain AM352_RS14345 PF08376 Nitrate and nitrite sensing AM352_RS14355 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS14360 PF00005 ABC transporter AM352_RS14365 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS14365 PF04324 BFD-like [2Fe-2S] binding domain AM352_RS14365 PF01077 Nitrite and sulphite reductase 4Fe-4S domain AM352_RS14365 PF13806 Rieske-like [2Fe-2S] domain AM352_RS14365 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain AM352_RS14365 PF18267 Rubredoxin NAD+ reductase C-terminal domain AM352_RS14370 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS14370 PF00384 Molybdopterin oxidoreductase AM352_RS14370 PF04324 BFD-like [2Fe-2S] binding domain AM352_RS14370 PF01568 Molydopterin dinucleotide binding domain AM352_RS14375 PF11924 Inverse autotransporter, beta-domain AM352_RS14380 PF00072 Response regulator receiver domain AM352_RS14380 PF00196 Bacterial regulatory proteins, luxR family AM352_RS14385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS14385 PF07730 Histidine kinase AM352_RS14385 PF00672 HAMP domain AM352_RS14385 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term AM352_RS14395 PF07690 Major Facilitator Superfamily AM352_RS14400 PF00384 Molybdopterin oxidoreductase AM352_RS14400 PF01568 Molydopterin dinucleotide binding domain AM352_RS14400 PF14710 Respiratory nitrate reductase alpha N-terminal AM352_RS14405 PF14711 Respiratory nitrate reductase beta C-terminal AM352_RS14405 PF13247 4Fe-4S dicluster domain AM352_RS14410 PF02613 Nitrate reductase delta subunit AM352_RS14415 PF02665 Nitrate reductase gamma subunit AM352_RS14435 PF01842 ACT domain AM352_RS14435 PF00551 Formyl transferase AM352_RS14440 PF02810 SEC-C motif AM352_RS14445 PF01734 Patatin-like phospholipase AM352_RS14450 PF00072 Response regulator receiver domain AM352_RS14455 PF00483 Nucleotidyl transferase AM352_RS14460 PF00816 H-NS histone family AM352_RS14465 PF00265 Thymidine kinase AM352_RS14470 PF00171 Aldehyde dehydrogenase family AM352_RS14470 PF00465 Iron-containing alcohol dehydrogenase AM352_RS14475 PF01914 MarC family integral membrane protein AM352_RS14485 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS14490 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS14495 PF12911 N-terminal TM domain of oligopeptide transport permease C AM352_RS14495 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS14500 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS14500 PF00005 ABC transporter AM352_RS14505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS14505 PF00005 ABC transporter AM352_RS14510 PF04269 Protein of unknown function, DUF440 AM352_RS14515 PF13396 Phospholipase_D-nuclease N-terminal AM352_RS14515 PF13091 PLD-like domain AM352_RS14520 PF03795 YCII-related domain AM352_RS14525 PF03544 Gram-negative bacterial TonB protein C-terminal AM352_RS14530 PF03061 Thioesterase superfamily AM352_RS14535 PF04279 Intracellular septation protein A AM352_RS14545 PF03922 OmpW family AM352_RS14555 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS14560 PF00290 Tryptophan synthase alpha chain AM352_RS14565 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS14570 PF00218 Indole-3-glycerol phosphate synthase AM352_RS14570 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase AM352_RS14575 PF00117 Glutamine amidotransferase class-I AM352_RS14575 PF02885 Glycosyl transferase family, helical bundle domain AM352_RS14575 PF00591 Glycosyl transferase family, a/b domain AM352_RS14580 PF00425 chorismate binding enzyme AM352_RS14580 PF04715 Anthranilate synthase component I, N terminal region AM352_RS14585 PF08255 Trp-operon Leader Peptide AM352_RS14590 PF02811 PHP domain AM352_RS14595 PF01300 Telomere recombination AM352_RS14600 PF00849 RNA pseudouridylate synthase AM352_RS14600 PF01479 S4 domain AM352_RS14605 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM352_RS14610 PF00106 short chain dehydrogenase AM352_RS14615 PF08496 Peptidase family S49 N-terminal AM352_RS14615 PF01343 Peptidase family S49 AM352_RS14620 PF10692 Protein of unknown function (DUF2498) AM352_RS14625 PF01396 Topoisomerase DNA binding C4 zinc finger AM352_RS14625 PF01751 Toprim domain AM352_RS14625 PF01131 DNA topoisomerase AM352_RS14625 PF08272 Topoisomerase I zinc-ribbon-like AM352_RS14630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS14630 PF03466 LysR substrate binding domain AM352_RS14640 PF00330 Aconitase family (aconitate hydratase) AM352_RS14640 PF00694 Aconitase C-terminal domain AM352_RS14645 PF00925 GTP cyclohydrolase II AM352_RS14650 PF01569 PAP2 superfamily AM352_RS14655 PF06305 Lipopolysaccharide assembly protein A domain AM352_RS14660 PF18073 Rubredoxin metal binding domain AM352_RS14665 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family AM352_RS14670 PF01253 Translation initiation factor SUI1 AM352_RS14675 PF05433 Glycine zipper 2TM domain AM352_RS14680 PF00455 DeoR C terminal sensor domain AM352_RS14680 PF08220 DeoR-like helix-turn-helix domain AM352_RS14695 PF00563 EAL domain AM352_RS14695 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS14695 PF13426 PAS domain AM352_RS14700 PF08206 Ribonuclease B OB domain AM352_RS14700 PF00773 RNB domain AM352_RS14700 PF17876 Cold shock domain AM352_RS14700 PF00575 S1 RNA binding domain AM352_RS14725 PF06977 SdiA-regulated AM352_RS14730 PF00005 ABC transporter AM352_RS14735 PF00005 ABC transporter AM352_RS14735 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS14740 PF12911 N-terminal TM domain of oligopeptide transport permease C AM352_RS14740 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS14745 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS14750 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS14760 PF02954 Bacterial regulatory protein, Fis family AM352_RS14760 PF00158 Sigma-54 interaction domain AM352_RS14765 PF04012 PspA/IM30 family AM352_RS14770 PF06667 Phage shock protein B AM352_RS14775 PF04024 PspC domain AM352_RS14780 PF09584 Phage shock protein PspD (Phageshock_PspD) AM352_RS14785 PF04317 YcjX-like family, DUF463 AM352_RS14790 PF05128 Domain of unknown function (DUF697) AM352_RS14795 PF00158 Sigma-54 interaction domain AM352_RS14795 PF18024 Helix-turn-helix domain AM352_RS14800 PF08534 Redoxin AM352_RS14805 PF13378 Enolase C-terminal domain-like AM352_RS14805 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM352_RS14810 PF00246 Zinc carboxypeptidase AM352_RS14815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS14820 PF00924 Mechanosensitive ion channel AM352_RS14825 PF10749 Protein of unknown function (DUF2534) AM352_RS14830 PF00582 Universal stress protein family AM352_RS14835 PF14001 YdfZ protein AM352_RS14840 PF00027 Cyclic nucleotide-binding domain AM352_RS14840 PF13545 Crp-like helix-turn-helix domain AM352_RS14845 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM352_RS14845 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain AM352_RS14850 PF03806 AbgT putative transporter family AM352_RS14855 PF01713 Smr domain AM352_RS14860 PF08448 PAS fold AM352_RS14860 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS14865 PF01544 CorA-like Mg2+ transporter protein AM352_RS14875 PF00271 Helicase conserved C-terminal domain AM352_RS14875 PF00270 DEAD/DEAH box helicase AM352_RS14875 PF03880 DbpA RNA binding domain AM352_RS14880 PF01171 PP-loop family AM352_RS14885 PF00582 Universal stress protein family AM352_RS14895 PF00267 Gram-negative porin AM352_RS14900 PF10371 Domain of unknown function AM352_RS14900 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II AM352_RS14900 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS14900 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg AM352_RS14900 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase AM352_RS14905 PF03891 Domain of unknown function (DUF333) AM352_RS14910 PF03724 META domain AM352_RS14915 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain AM352_RS14915 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM352_RS14920 PF03895 YadA-like membrane anchor domain AM352_RS14920 PF05658 Head domain of trimeric autotransporter adhesin AM352_RS14935 PF11739 Dicarboxylate transport AM352_RS14940 PF13617 YnbE-like lipoprotein AM352_RS14945 PF07027 Protein of unknown function (DUF1318) AM352_RS14950 PF00248 Aldo/keto reductase family AM352_RS14955 PF02525 Flavodoxin-like fold AM352_RS14960 PF11898 Domain of unknown function (DUF3418) AM352_RS14960 PF00270 DEAD/DEAH box helicase AM352_RS14960 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold AM352_RS14960 PF00271 Helicase conserved C-terminal domain AM352_RS14960 PF04408 Helicase associated domain (HA2) AM352_RS14965 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS14965 PF03466 LysR substrate binding domain AM352_RS14975 PF02321 Outer membrane efflux protein AM352_RS14980 PF13533 Biotin-lipoyl like AM352_RS14990 PF02698 DUF218 domain AM352_RS14995 PF00171 Aldehyde dehydrogenase family AM352_RS15000 PF13472 GDSL-like Lipase/Acylhydrolase family AM352_RS15000 PF07859 alpha/beta hydrolase fold AM352_RS15005 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM352_RS15005 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM352_RS15010 PF01292 Prokaryotic cytochrome b561 AM352_RS15015 PF02583 Metal-sensitive transcriptional repressor AM352_RS15020 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS15020 PF00107 Zinc-binding dehydrogenase AM352_RS15030 PF00672 HAMP domain AM352_RS15030 PF02203 Tar ligand binding domain homologue AM352_RS15030 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS15035 PF03466 LysR substrate binding domain AM352_RS15035 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS15040 PF02833 DHHA2 domain AM352_RS15040 PF01368 DHH family AM352_RS15045 PF07063 Domain of unknown function (DUF1338) AM352_RS15050 PF00135 Carboxylesterase family AM352_RS15055 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM352_RS15065 PF04325 Protein of unknown function (DUF465) AM352_RS15070 PF13302 Acetyltransferase (GNAT) domain AM352_RS15075 PF18836 Beta solenoid repeat from YDCK AM352_RS15080 PF03595 Voltage-dependent anion channel AM352_RS15085 PF03848 Tellurite resistance protein TehB AM352_RS15090 PF11769 Protein of unknown function (DUF3313) AM352_RS15095 PF00892 EamA-like transporter family AM352_RS15105 PF03594 Benzoate membrane transport protein AM352_RS15110 PF01381 Helix-turn-helix AM352_RS15110 PF07883 Cupin domain AM352_RS15115 PF12392 Collagenase AM352_RS15115 PF01136 Peptidase family U32 AM352_RS15120 PF07927 HicA toxin of bacterial toxin-antitoxin, AM352_RS15125 PF01381 Helix-turn-helix AM352_RS15125 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system AM352_RS15130 PF00392 Bacterial regulatory proteins, gntR family AM352_RS15130 PF00155 Aminotransferase class I and II AM352_RS15135 PF00171 Aldehyde dehydrogenase family AM352_RS15165 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS15170 PF10735 Protein of unknown function (DUF2526) AM352_RS15175 PF04657 Putative inner membrane exporter, YdcZ AM352_RS15180 PF00583 Acetyltransferase (GNAT) family AM352_RS15185 PF01381 Helix-turn-helix AM352_RS15185 PF08671 Anti-repressor SinI AM352_RS15190 PF16884 N-terminal domain of oxidoreductase AM352_RS15190 PF00107 Zinc-binding dehydrogenase AM352_RS15195 PF00593 TonB dependent receptor AM352_RS15195 PF07715 TonB-dependent Receptor Plug Domain AM352_RS15205 PF00324 Amino acid permease AM352_RS15210 PF13417 Glutathione S-transferase, N-terminal domain AM352_RS15215 PF01361 Tautomerase enzyme AM352_RS15220 PF01590 GAF domain AM352_RS15220 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS15220 PF00360 Phytochrome region AM352_RS15220 PF00563 EAL domain AM352_RS15225 PF01613 Flavin reductase like domain AM352_RS15235 PF00797 N-acetyltransferase AM352_RS15240 PF02665 Nitrate reductase gamma subunit AM352_RS15245 PF02613 Nitrate reductase delta subunit AM352_RS15250 PF14711 Respiratory nitrate reductase beta C-terminal AM352_RS15250 PF13247 4Fe-4S dicluster domain AM352_RS15255 PF00384 Molybdopterin oxidoreductase AM352_RS15255 PF14710 Respiratory nitrate reductase alpha N-terminal AM352_RS15255 PF01568 Molydopterin dinucleotide binding domain AM352_RS15260 PF07690 Major Facilitator Superfamily AM352_RS15265 PF08361 MAATS-type transcriptional repressor, C-terminal region AM352_RS15265 PF00440 Bacterial regulatory proteins, tetR family AM352_RS15270 PF07690 Major Facilitator Superfamily AM352_RS15280 PF00267 Gram-negative porin AM352_RS15285 PF00892 EamA-like transporter family AM352_RS15295 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS15295 PF01568 Molydopterin dinucleotide binding domain AM352_RS15295 PF00384 Molybdopterin oxidoreductase AM352_RS15300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS15300 PF01568 Molydopterin dinucleotide binding domain AM352_RS15300 PF00384 Molybdopterin oxidoreductase AM352_RS15305 PF12800 4Fe-4S binding domain AM352_RS15305 PF13247 4Fe-4S dicluster domain AM352_RS15305 PF09163 Formate dehydrogenase N, transmembrane AM352_RS15310 PF01292 Prokaryotic cytochrome b561 AM352_RS15315 PF00390 Malic enzyme, N-terminal domain AM352_RS15315 PF03949 Malic enzyme, NAD binding domain AM352_RS15320 PF08136 30S ribosomal protein subunit S22 family AM352_RS15325 PF02566 OsmC-like protein AM352_RS15330 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS15330 PF00005 ABC transporter AM352_RS15335 PF00005 ABC transporter AM352_RS15335 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS15340 PF12911 N-terminal TM domain of oligopeptide transport permease C AM352_RS15340 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS15345 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS15350 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS15355 PF01427 D-ala-D-ala dipeptidase AM352_RS15365 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS15365 PF02203 Tar ligand binding domain homologue AM352_RS15365 PF00672 HAMP domain AM352_RS15380 PF02638 Glycosyl hydrolase-like 10 AM352_RS15385 PF05190 MutS family domain IV AM352_RS15385 PF01624 MutS domain I AM352_RS15385 PF05192 MutS domain III AM352_RS15385 PF00488 MutS domain V AM352_RS15385 PF05188 MutS domain II AM352_RS15390 PF01713 Smr domain AM352_RS15390 PF00488 MutS domain V AM352_RS15395 PF03952 Enolase, N-terminal domain AM352_RS15395 PF00113 Enolase, C-terminal TIM barrel domain AM352_RS15415 PF13302 Acetyltransferase (GNAT) domain AM352_RS15435 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS15435 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS15440 PF13811 Domain of unknown function (DUF4186) AM352_RS15445 PF04960 Glutaminase AM352_RS15450 PF00672 HAMP domain AM352_RS15450 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS15450 PF02203 Tar ligand binding domain homologue AM352_RS15455 PF00171 Aldehyde dehydrogenase family AM352_RS15460 PF03466 LysR substrate binding domain AM352_RS15460 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS15465 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain AM352_RS15465 PF00056 lactate/malate dehydrogenase, NAD binding domain AM352_RS15470 PF07690 Major Facilitator Superfamily AM352_RS15475 PF01914 MarC family integral membrane protein AM352_RS15480 PF01047 MarR family AM352_RS15485 PF12833 Helix-turn-helix domain AM352_RS15490 PF13999 MarB protein AM352_RS15495 PF00892 EamA-like transporter family AM352_RS15500 PF07690 Major Facilitator Superfamily AM352_RS15505 PF00005 ABC transporter AM352_RS15510 PF00005 ABC transporter AM352_RS15515 PF02653 Branched-chain amino acid transport system / permease component AM352_RS15520 PF02653 Branched-chain amino acid transport system / permease component AM352_RS15525 PF13188 PAS domain AM352_RS15525 PF00158 Sigma-54 interaction domain AM352_RS15525 PF02954 Bacterial regulatory protein, Fis family AM352_RS15530 PF01717 Cobalamin-independent synthase, Catalytic domain AM352_RS15540 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS15545 PF00144 Beta-lactamase AM352_RS15550 PF01432 Peptidase family M3 AM352_RS15555 PF00106 short chain dehydrogenase AM352_RS15560 PF00392 Bacterial regulatory proteins, gntR family AM352_RS15560 PF07729 FCD domain AM352_RS15565 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS15565 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS15570 PF07690 Major Facilitator Superfamily AM352_RS15570 PF00083 Sugar (and other) transporter AM352_RS15575 PF08240 Alcohol dehydrogenase GroES-like domain AM352_RS15575 PF00107 Zinc-binding dehydrogenase AM352_RS15580 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain AM352_RS15580 PF13378 Enolase C-terminal domain-like AM352_RS15585 PF02694 Uncharacterised BCR, YnfA/UPF0060 family AM352_RS15590 PF06932 Protein of unknown function (DUF1283) AM352_RS15595 PF13302 Acetyltransferase (GNAT) domain AM352_RS15600 PF06788 Uncharacterised protein family (UPF0257) AM352_RS15605 PF06649 Protein of unknown function (DUF1161) AM352_RS15610 PF01568 Molydopterin dinucleotide binding domain AM352_RS15610 PF00384 Molybdopterin oxidoreductase AM352_RS15610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS15615 PF01568 Molydopterin dinucleotide binding domain AM352_RS15615 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS15615 PF00384 Molybdopterin oxidoreductase AM352_RS15620 PF12800 4Fe-4S binding domain AM352_RS15620 PF13247 4Fe-4S dicluster domain AM352_RS15625 PF04976 DMSO reductase anchor subunit (DmsC) AM352_RS15630 PF02613 Nitrate reductase delta subunit AM352_RS15635 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS15640 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM352_RS15645 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS15650 PF00571 CBS domain AM352_RS15650 PF00005 ABC transporter AM352_RS15655 PF00654 Voltage gated chloride channel AM352_RS15665 PF00480 ROK family AM352_RS15670 PF03466 LysR substrate binding domain AM352_RS15670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS15675 PF07690 Major Facilitator Superfamily AM352_RS15685 PF02074 Carboxypeptidase Taq (M32) metallopeptidase AM352_RS15695 PF00089 Trypsin AM352_RS15700 PF00893 Small Multidrug Resistance protein AM352_RS15705 PF00893 Small Multidrug Resistance protein AM352_RS15715 PF01594 AI-2E family transporter AM352_RS15720 PF02233 NAD(P) transhydrogenase beta subunit AM352_RS15725 PF01262 Alanine dehydrogenase/PNT, C-terminal domain AM352_RS15725 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch AM352_RS15725 PF05222 Alanine dehydrogenase/PNT, N-terminal domain AM352_RS15735 PF07338 Protein of unknown function (DUF1471) AM352_RS15740 PF13520 Amino acid permease AM352_RS15750 PF06942 GlpM protein AM352_RS15755 PF00072 Response regulator receiver domain AM352_RS15755 PF00486 Transcriptional regulatory protein, C terminal AM352_RS15760 PF00672 HAMP domain AM352_RS15760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS15760 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS15765 PF05472 DNA replication terminus site-binding protein (Ter protein) AM352_RS15770 PF10415 Fumarase C C-terminus AM352_RS15770 PF00206 Lyase AM352_RS15775 PF05681 Fumarate hydratase (Fumerase) AM352_RS15775 PF05683 Fumarase C-terminus AM352_RS15780 PF01238 Phosphomannose isomerase type I AM352_RS15785 PF06097 Bacterial protein of unknown function (DUF945) AM352_RS15790 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family AM352_RS15790 PF00356 Bacterial regulatory proteins, lacI family AM352_RS15795 PF02378 Phosphotransferase system, EIIC AM352_RS15795 PF00367 phosphotransferase system, EIIB AM352_RS15800 PF00155 Aminotransferase class I and II AM352_RS15805 PF00962 Adenosine/AMP deaminase AM352_RS15810 PF02894 Oxidoreductase family, C-terminal alpha/beta domain AM352_RS15810 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM352_RS15820 PF05321 Haemolysin expression modulating protein AM352_RS15825 PF10754 Protein of unknown function (DUF2569) AM352_RS15830 PF02508 Rnf-Nqr subunit, membrane protein AM352_RS15835 PF04060 Putative Fe-S cluster AM352_RS15840 PF13375 RnfC Barrel sandwich hybrid domain AM352_RS15840 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit AM352_RS15840 PF13237 4Fe-4S dicluster domain AM352_RS15840 PF10531 SLBB domain AM352_RS15845 PF03116 NQR2, RnfD, RnfE family AM352_RS15850 PF04205 FMN-binding domain AM352_RS15855 PF02508 Rnf-Nqr subunit, membrane protein AM352_RS15860 PF00730 HhH-GPD superfamily base excision DNA repair protein AM352_RS15860 PF00633 Helix-hairpin-helix motif AM352_RS15860 PF10576 Iron-sulfur binding domain of endonuclease III AM352_RS15865 PF00854 POT family AM352_RS15870 PF02798 Glutathione S-transferase, N-terminal domain AM352_RS15870 PF00043 Glutathione S-transferase, C-terminal domain AM352_RS15875 PF08543 Phosphomethylpyrimidine kinase AM352_RS15880 PF01479 S4 domain AM352_RS15880 PF00579 tRNA synthetases class I (W and Y) AM352_RS15885 PF01243 Pyridoxamine 5'-phosphate oxidase AM352_RS15885 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region AM352_RS15890 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme AM352_RS15895 PF03702 Anhydro-N-acetylmuramic acid kinase AM352_RS15900 PF05433 Glycine zipper 2TM domain AM352_RS15905 PF01047 MarR family AM352_RS15910 PF07869 Protein of unknown function (DUF1656) AM352_RS15915 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS15915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS15920 PF04632 Fusaric acid resistance protein family AM352_RS15925 PF00080 Copper/zinc superoxide dismutase (SODC) AM352_RS15930 PF00248 Aldo/keto reductase family AM352_RS15935 PF06945 Protein of unknown function (DUF1289) AM352_RS15940 PF00440 Bacterial regulatory proteins, tetR family AM352_RS15940 PF16925 Tetracyclin repressor-like, C-terminal domain AM352_RS15945 PF00724 NADH:flavin oxidoreductase / NADH oxidase family AM352_RS15950 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM352_RS15955 PF00929 Exonuclease AM352_RS15960 PF00462 Glutaredoxin AM352_RS15965 PF00877 NlpC/P60 family AM352_RS15970 PF02371 Transposase IS116/IS110/IS902 family AM352_RS15970 PF01548 Transposase AM352_RS15975 PF02777 Iron/manganese superoxide dismutases, C-terminal domain AM352_RS15975 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain AM352_RS15980 PF07690 Major Facilitator Superfamily AM352_RS15995 PF00356 Bacterial regulatory proteins, lacI family AM352_RS16000 PF03466 LysR substrate binding domain AM352_RS16000 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS16005 PF07690 Major Facilitator Superfamily AM352_RS16015 PF00677 Lumazine binding domain AM352_RS16020 PF01554 MatE AM352_RS16040 PF00593 TonB dependent receptor AM352_RS16040 PF07715 TonB-dependent Receptor Plug Domain AM352_RS16045 PF00756 Putative esterase AM352_RS16065 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS16070 PF00005 ABC transporter AM352_RS16075 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS16080 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS16090 PF01292 Prokaryotic cytochrome b561 AM352_RS16095 PF13247 4Fe-4S dicluster domain AM352_RS16105 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain AM352_RS16105 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 AM352_RS16110 PF13247 4Fe-4S dicluster domain AM352_RS16110 PF12800 4Fe-4S binding domain AM352_RS16115 PF10965 Protein of unknown function (DUF2767) AM352_RS16120 PF03180 NLPA lipoprotein AM352_RS16125 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS16130 PF00005 ABC transporter AM352_RS16130 PF09383 NIL domain AM352_RS16135 PF00571 CBS domain AM352_RS16135 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS16140 PF01053 Cys/Met metabolism PLP-dependent enzyme AM352_RS16150 PF00224 Pyruvate kinase, barrel domain AM352_RS16150 PF02887 Pyruvate kinase, alpha/beta domain AM352_RS16155 PF04728 Lipoprotein leucine-zipper AM352_RS16160 PF03734 L,D-transpeptidase catalytic domain AM352_RS16160 PF01476 LysM domain AM352_RS16160 PF17969 L,D-transpeptidase C-terminal domain AM352_RS16165 PF02657 Fe-S metabolism associated domain AM352_RS16170 PF00266 Aminotransferase class-V AM352_RS16175 PF01458 Uncharacterized protein family (UPF0051) AM352_RS16180 PF00005 ABC transporter AM352_RS16185 PF01458 Uncharacterized protein family (UPF0051) AM352_RS16190 PF01521 Iron-sulphur cluster biosynthesis AM352_RS16195 PF03466 LysR substrate binding domain AM352_RS16195 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS16205 PF15930 Domain of unknown function AM352_RS16210 PF03061 Thioesterase superfamily AM352_RS16215 PF13183 4Fe-4S dicluster domain AM352_RS16215 PF01565 FAD binding domain AM352_RS16215 PF02913 FAD linked oxidases, C-terminal domain AM352_RS16220 PF01594 AI-2E family transporter AM352_RS16230 PF00391 PEP-utilising enzyme, mobile domain AM352_RS16230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain AM352_RS16230 PF02896 PEP-utilising enzyme, TIM barrel domain AM352_RS16235 PF03618 Kinase/pyrophosphorylase AM352_RS16240 PF00793 DAHP synthetase I family AM352_RS16245 PF10636 Hemin uptake protein hemP AM352_RS16250 PF02696 Uncharacterized ACR, YdiU/UPF0061 family AM352_RS16255 PF00563 EAL domain AM352_RS16260 PF00877 NlpC/P60 family AM352_RS16265 PF00005 ABC transporter AM352_RS16270 PF00255 Glutathione peroxidase AM352_RS16280 PF01032 FecCD transport family AM352_RS16285 PF00216 Bacterial DNA-binding protein AM352_RS16290 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain AM352_RS16290 PF03147 Ferredoxin-fold anticodon binding domain AM352_RS16290 PF03484 tRNA synthetase B5 domain AM352_RS16290 PF01588 Putative tRNA binding domain AM352_RS16290 PF03483 B3/4 domain AM352_RS16295 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain AM352_RS16295 PF01409 tRNA synthetases class II core domain (F) AM352_RS16305 PF00453 Ribosomal protein L20 AM352_RS16310 PF01632 Ribosomal protein L35 AM352_RS16315 PF05198 Translation initiation factor IF-3, N-terminal domain AM352_RS16315 PF00707 Translation initiation factor IF-3, C-terminal domain AM352_RS16320 PF03129 Anticodon binding domain AM352_RS16320 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM352_RS16320 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain AM352_RS16320 PF02824 TGS domain AM352_RS16330 PF04338 Protein of unknown function, DUF481 AM352_RS16335 PF00294 pfkB family carbohydrate kinase AM352_RS16340 PF11080 Endoribonuclease GhoS AM352_RS16345 PF03881 Fructosamine kinase AM352_RS16350 PF14002 YniB-like protein AM352_RS16355 PF13419 Haloacid dehalogenase-like hydrolase AM352_RS16365 PF04307 LexA-binding, inner membrane-associated putative hydrolase AM352_RS16370 PF00375 Sodium:dicarboxylate symporter family AM352_RS16375 PF10729 Cell division activator CedA AM352_RS16380 PF04794 YdjC-like protein AM352_RS16385 PF02056 Family 4 glycosyl hydrolase AM352_RS16385 PF11975 Family 4 glycosyl hydrolase C-terminal domain AM352_RS16390 PF07883 Cupin domain AM352_RS16390 PF12833 Helix-turn-helix domain AM352_RS16395 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit AM352_RS16400 PF02378 Phosphotransferase system, EIIC AM352_RS16405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS16415 PF04355 SmpA / OmlA family AM352_RS16425 PF02540 NAD synthase AM352_RS16430 PF05962 HutD AM352_RS16435 PF07813 LTXXQ motif family protein AM352_RS16440 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family AM352_RS16445 PF04996 Succinylarginine dihydrolase AM352_RS16450 PF00171 Aldehyde dehydrogenase family AM352_RS16455 PF04958 Arginine N-succinyltransferase beta subunit AM352_RS16460 PF00202 Aminotransferase class-III AM352_RS16465 PF03372 Endonuclease/Exonuclease/phosphatase family AM352_RS16475 PF13416 Bacterial extracellular solute-binding protein AM352_RS16480 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS16485 PF00005 ABC transporter AM352_RS16490 PF00581 Rhodanese-like domain AM352_RS16495 PF01066 CDP-alcohol phosphatidyltransferase AM352_RS16500 PF02627 Carboxymuconolactone decarboxylase family AM352_RS16505 PF00293 NUDIX domain AM352_RS16510 PF07383 Protein of unknown function (DUF1496) AM352_RS16515 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase AM352_RS16515 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain AM352_RS16520 PF01131 DNA topoisomerase AM352_RS16520 PF01751 Toprim domain AM352_RS16525 PF02769 AIR synthase related protein, C-terminal domain AM352_RS16525 PF00586 AIR synthase related protein, N-terminal domain AM352_RS16535 PF00881 Nitroreductase family AM352_RS16540 PF01343 Peptidase family S49 AM352_RS16545 PF17763 Glutaminase/Asparaginase C-terminal domain AM352_RS16545 PF00710 Asparaginase, N-terminal AM352_RS16550 PF00857 Isochorismatase family AM352_RS16555 PF07023 Protein of unknown function (DUF1315) AM352_RS16565 PF01641 SelR domain AM352_RS16570 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain AM352_RS16570 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain AM352_RS16575 PF01263 Aldose 1-epimerase AM352_RS16580 PF06629 MltA-interacting protein MipA AM352_RS16585 PF06798 PrkA serine protein kinase C-terminal domain AM352_RS16585 PF08298 PrkA AAA domain AM352_RS16590 PF04285 Protein of unknown function (DUF444) AM352_RS16595 PF13649 Methyltransferase domain AM352_RS16600 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS16600 PF17155 Gammaproteobacterial periplasmic sensor domain AM352_RS16605 PF04073 Aminoacyl-tRNA editing domain AM352_RS16610 PF04284 Protein of unknown function (DUF441) AM352_RS16615 PF02311 AraC-like ligand binding domain AM352_RS16615 PF12833 Helix-turn-helix domain AM352_RS16620 PF07690 Major Facilitator Superfamily AM352_RS16625 PF06418 CTP synthase N-terminus AM352_RS16625 PF00117 Glutamine amidotransferase class-I AM352_RS16630 PF04343 Protein of unknown function, DUF488 AM352_RS16635 PF03891 Domain of unknown function (DUF333) AM352_RS16650 PF04226 Transglycosylase associated protein AM352_RS16655 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS16655 PF01568 Molydopterin dinucleotide binding domain AM352_RS16655 PF00384 Molybdopterin oxidoreductase AM352_RS16665 PF08956 Domain of unknown function (DUF1869) AM352_RS16670 PF09313 Domain of unknown function (DUF1971) AM352_RS16675 PF01810 LysE type translocator AM352_RS16680 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment AM352_RS16685 PF18364 Molybdopterin oxidoreductase N-terminal domain AM352_RS16685 PF00384 Molybdopterin oxidoreductase AM352_RS16685 PF01568 Molydopterin dinucleotide binding domain AM352_RS16690 PF03264 NapC/NirT cytochrome c family, N-terminal region AM352_RS16695 PF00582 Universal stress protein family AM352_RS16700 PF03279 Bacterial lipid A biosynthesis acyltransferase AM352_RS16710 PF00180 Isocitrate/isopropylmalate dehydrogenase AM352_RS16715 PF00849 RNA pseudouridylate synthase AM352_RS16720 PF00293 NUDIX domain AM352_RS16730 PF04356 Protein of unknown function (DUF489) AM352_RS16735 PF00206 Lyase AM352_RS16735 PF08328 Adenylosuccinate lyase C-terminal AM352_RS16740 PF11799 impB/mucB/samB family C-terminal domain AM352_RS16740 PF00817 impB/mucB/samB family AM352_RS16740 PF13438 Domain of unknown function (DUF4113) AM352_RS16740 PF11798 IMS family HHH motif AM352_RS16745 PF00717 Peptidase S24-like AM352_RS16755 PF00535 Glycosyl transferase family 2 AM352_RS16800 PF06791 Prophage tail length tape measure protein AM352_RS16910 PF00182 Chitinase class I AM352_RS16925 PF00011 Hsp20/alpha crystallin family AM352_RS16930 PF03589 Antitermination protein AM352_RS16945 PF07102 Protein of unknown function (DUF1364) AM352_RS16965 PF06183 DinI-like family AM352_RS17060 PF07358 Protein of unknown function (DUF1482) AM352_RS17075 PF12684 PDDEXK-like domain of unknown function (DUF3799) AM352_RS17075 PF06630 Enterobacterial exodeoxyribonuclease VIII AM352_RS17090 PF06806 Putative excisionase (DUF1233) AM352_RS17095 PF12167 Arm DNA-binding domain AM352_RS17095 PF00589 Phage integrase family AM352_RS17100 PF00072 Response regulator receiver domain AM352_RS17100 PF00486 Transcriptional regulatory protein, C terminal AM352_RS17105 PF08918 PhoQ Sensor AM352_RS17105 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS17110 PF08007 Cupin superfamily protein AM352_RS17115 PF01546 Peptidase family M20/M25/M40 AM352_RS17115 PF07687 Peptidase dimerisation domain AM352_RS17120 PF08402 TOBE domain AM352_RS17120 PF00005 ABC transporter AM352_RS17125 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS17130 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS17135 PF13416 Bacterial extracellular solute-binding protein AM352_RS17140 PF02146 Sir2 family AM352_RS17145 PF00480 ROK family AM352_RS17150 PF02687 FtsX-like permease family AM352_RS17150 PF12704 MacB-like periplasmic core domain AM352_RS17155 PF00005 ABC transporter AM352_RS17160 PF12704 MacB-like periplasmic core domain AM352_RS17160 PF02687 FtsX-like permease family AM352_RS17165 PF01757 Acyltransferase family AM352_RS17170 PF02559 CarD-like/TRCF domain AM352_RS17170 PF00271 Helicase conserved C-terminal domain AM352_RS17170 PF17757 UvrB interaction domain AM352_RS17170 PF00270 DEAD/DEAH box helicase AM352_RS17170 PF03461 TRCF domain AM352_RS17175 PF03734 L,D-transpeptidase catalytic domain AM352_RS17175 PF01476 LysM domain AM352_RS17175 PF17969 L,D-transpeptidase C-terminal domain AM352_RS17180 PF07338 Protein of unknown function (DUF1471) AM352_RS17185 PF00440 Bacterial regulatory proteins, tetR family AM352_RS17190 PF05433 Glycine zipper 2TM domain AM352_RS17195 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS17200 PF05728 Uncharacterised protein family (UPF0227) AM352_RS17205 PF00933 Glycosyl hydrolase family 3 N terminal domain AM352_RS17210 PF01636 Phosphotransferase enzyme family AM352_RS17215 PF13036 Peptidoglycan-synthase activator LpoB AM352_RS17220 PF07233 Protein of unknown function (DUF1425) AM352_RS17225 PF01230 HIT domain AM352_RS17230 PF00593 TonB dependent receptor AM352_RS17230 PF07715 TonB-dependent Receptor Plug Domain AM352_RS17235 PF00367 phosphotransferase system, EIIB AM352_RS17235 PF02378 Phosphotransferase system, EIIC AM352_RS17240 PF01026 TatD related DNase AM352_RS17245 PF09115 DNA polymerase III, delta subunit, C terminal AM352_RS17250 PF02223 Thymidylate kinase AM352_RS17255 PF02618 YceG-like family AM352_RS17260 PF01063 Amino-transferase class IV AM352_RS17265 PF02801 Beta-ketoacyl synthase, C-terminal domain AM352_RS17265 PF00109 Beta-ketoacyl synthase, N-terminal domain AM352_RS17270 PF00550 Phosphopantetheine attachment site AM352_RS17280 PF00698 Acyl transferase domain AM352_RS17285 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III AM352_RS17285 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal AM352_RS17290 PF02504 Fatty acid synthesis protein AM352_RS17295 PF01783 Ribosomal L32p protein family AM352_RS17300 PF02620 Large ribosomal RNA subunit accumulation protein YceD AM352_RS17305 PF02545 Maf-like protein AM352_RS17310 PF01479 S4 domain AM352_RS17310 PF00849 RNA pseudouridylate synthase AM352_RS17325 PF00575 S1 RNA binding domain AM352_RS17325 PF10150 Ribonuclease E/G family AM352_RS17325 PF12111 Polyribonucleotide phosphorylase C terminal AM352_RS17330 PF00669 Bacterial flagellin N-terminal helical region AM352_RS17335 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS17335 PF00460 Flagella basal body rod protein AM352_RS17340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase AM352_RS17340 PF10135 Rod binding protein AM352_RS17345 PF02119 Flagellar P-ring protein AM352_RS17350 PF02107 Flagellar L-ring protein AM352_RS17355 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS17355 PF00460 Flagella basal body rod protein AM352_RS17360 PF00460 Flagella basal body rod protein AM352_RS17360 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS17365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS17365 PF07559 Flagellar basal body protein FlaE AM352_RS17365 PF00460 Flagella basal body rod protein AM352_RS17370 PF03963 Flagellar hook capping protein - N-terminal region AM352_RS17370 PF13861 FlgD Tudor-like domain AM352_RS17370 PF13860 FlgD Ig-like domain AM352_RS17375 PF00460 Flagella basal body rod protein AM352_RS17375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS17380 PF00460 Flagella basal body rod protein AM352_RS17385 PF13144 Chaperone for flagella basal body P-ring formation AM352_RS17390 PF04316 Anti-sigma-28 factor, FlgM AM352_RS17395 PF05130 FlgN protein AM352_RS17400 PF03023 Lipid II flippase MurJ AM352_RS17405 PF01408 Oxidoreductase family, NAD-binding Rossmann fold AM352_RS17410 PF04337 Protein of unknown function, DUF480 AM352_RS17415 PF13302 Acetyltransferase (GNAT) domain AM352_RS17420 PF07690 Major Facilitator Superfamily AM352_RS17425 PF13417 Glutathione S-transferase, N-terminal domain AM352_RS17425 PF04399 Glutaredoxin 2, C terminal domain AM352_RS17430 PF07273 Protein of unknown function (DUF1439) AM352_RS17435 PF01979 Amidohydrolase family AM352_RS17440 PF06183 DinI-like family AM352_RS17445 PF13991 BssS protein family AM352_RS17450 PF01266 FAD dependent oxidoreductase AM352_RS17455 PF10968 Protein of unknown function (DUF2770) AM352_RS17460 PF01292 Prokaryotic cytochrome b561 AM352_RS17465 PF04264 YceI-like domain AM352_RS17470 PF12368 Rhodanase C-terminal AM352_RS17470 PF17773 UPF0176 acylphosphatase like domain AM352_RS17470 PF00581 Rhodanese-like domain AM352_RS17475 PF03279 Bacterial lipid A biosynthesis acyltransferase AM352_RS17480 PF07690 Major Facilitator Superfamily AM352_RS17485 PF13984 MsyB protein AM352_RS17490 PF07119 Protein of unknown function (DUF1375) AM352_RS17495 PF00535 Glycosyl transferase family 2 AM352_RS17500 PF04349 Periplasmic glucan biosynthesis protein, MdoG AM352_RS17505 PF01757 Acyltransferase family AM352_RS17510 PF13091 PLD-like domain AM352_RS17515 PF01661 Macro domain AM352_RS17525 PF10610 Thin aggregative fimbriae synthesis protein AM352_RS17530 PF07012 Curlin associated repeat AM352_RS17535 PF07012 Curlin associated repeat AM352_RS17545 PF00196 Bacterial regulatory proteins, luxR family AM352_RS17550 PF10627 Curli assembly protein CsgE AM352_RS17555 PF10614 Type VIII secretion system (T8SS), CsgF protein AM352_RS17560 PF03783 Curli production assembly/transport component CsgG AM352_RS17565 PF06496 Protein of unknown function (DUF1097) AM352_RS17570 PF02613 Nitrate reductase delta subunit AM352_RS17575 PF02811 PHP domain AM352_RS17580 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain AM352_RS17595 PF00474 Sodium:solute symporter family AM352_RS17605 PF00171 Aldehyde dehydrogenase family AM352_RS17605 PF01619 Proline dehydrogenase AM352_RS17605 PF14850 DNA-binding domain of Proline dehydrogenase AM352_RS17605 PF18327 Proline utilization A proline dehydrogenase N-terminal domain AM352_RS17615 PF08362 YcdC-like protein, C-terminal region AM352_RS17615 PF00440 Bacterial regulatory proteins, tetR family AM352_RS17620 PF10685 Stress-induced bacterial acidophilic repeat motif AM352_RS17625 PF03358 NADPH-dependent FMN reductase AM352_RS17630 PF13993 YccJ-like protein AM352_RS17635 PF00328 Histidine phosphatase superfamily (branch 2) AM352_RS17650 PF02687 FtsX-like permease family AM352_RS17650 PF00005 ABC transporter AM352_RS17650 PF12704 MacB-like periplasmic core domain AM352_RS17655 PF12704 MacB-like periplasmic core domain AM352_RS17655 PF00005 ABC transporter AM352_RS17655 PF02687 FtsX-like permease family AM352_RS17660 PF00005 ABC transporter AM352_RS17660 PF02687 FtsX-like permease family AM352_RS17660 PF12704 MacB-like periplasmic core domain AM352_RS17670 PF10634 Fe2+ transport protein AM352_RS17675 PF03239 Iron permease FTR1 family AM352_RS17685 PF04205 FMN-binding domain AM352_RS17690 PF00578 AhpC/TSA family AM352_RS17695 PF13462 Thioredoxin AM352_RS17695 PF06965 Na+/H+ antiporter 1 AM352_RS17700 PF02683 Cytochrome C biogenesis protein transmembrane region AM352_RS17700 PF11412 Disulphide bond corrector protein DsbC AM352_RS17700 PF13098 Thioredoxin-like domain AM352_RS17710 PF00226 DnaJ domain AM352_RS17710 PF01556 DnaJ C terminal domain AM352_RS17720 PF01381 Helix-turn-helix AM352_RS17725 PF05015 RelE-like toxin of type II toxin-antitoxin system HigB AM352_RS17730 PF12801 4Fe-4S binding domain AM352_RS17735 PF00005 ABC transporter AM352_RS17740 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS17755 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS17760 PF02615 Malate/L-lactate dehydrogenase AM352_RS17770 PF00005 ABC transporter AM352_RS17775 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS17800 PF00072 Response regulator receiver domain AM352_RS17800 PF02954 Bacterial regulatory protein, Fis family AM352_RS17800 PF14532 Sigma-54 interaction domain AM352_RS17805 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS17805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS17805 PF00672 HAMP domain AM352_RS17815 PF07690 Major Facilitator Superfamily AM352_RS17825 PF01027 Inhibitor of apoptosis-promoting Bax1 AM352_RS17830 PF04358 DsrC like protein AM352_RS17835 PF00708 Acylphosphatase AM352_RS17840 PF10672 S-adenosylmethionine-dependent methyltransferase AM352_RS17840 PF17785 PUA-like domain AM352_RS17845 PF08755 Hemimethylated DNA-binding protein YccV like AM352_RS17850 PF13380 CoA binding domain AM352_RS17855 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) AM352_RS17860 PF02142 MGS-like domain AM352_RS17865 PF13361 UvrD-like helicase C-terminal domain AM352_RS17865 PF00580 UvrD/REP helicase N-terminal domain AM352_RS17865 PF12462 DNA helicase IV / RNA helicase N terminal AM352_RS17870 PF03733 Inner membrane component domain AM352_RS17875 PF12805 FUSC-like inner membrane protein yccS AM352_RS17880 PF04993 TfoX N-terminal domain AM352_RS17880 PF04994 TfoX C-terminal domain AM352_RS17885 PF03846 Cell division inhibitor SulA AM352_RS17890 PF01389 OmpA-like transmembrane domain AM352_RS17890 PF00691 OmpA family AM352_RS17895 PF17414 MatP C-terminal ribbon-helix-helix domain AM352_RS17895 PF06303 MatP N-terminal domain AM352_RS17900 PF05362 Lon protease (S16) C-terminal proteolytic domain AM352_RS17900 PF13654 AAA domain AM352_RS17905 PF07977 FabA-like domain AM352_RS17910 PF04957 Ribosome modulation factor AM352_RS17920 PF03886 ABC-type transport auxiliary lipoprotein component AM352_RS17925 PF02470 MlaD protein AM352_RS17930 PF04403 Paraquat-inducible protein A AM352_RS17935 PF12848 ABC transporter AM352_RS17935 PF00005 ABC transporter AM352_RS17935 PF16326 ABC transporter C-terminal domain AM352_RS17940 PF01170 Putative RNA methylase family UPF0020 AM352_RS17940 PF02926 THUMP domain AM352_RS17940 PF10672 S-adenosylmethionine-dependent methyltransferase AM352_RS17945 PF03473 MOSC domain AM352_RS17945 PF00111 2Fe-2S iron-sulfur cluster binding domain AM352_RS17945 PF03476 MOSC N-terminal beta barrel domain AM352_RS17950 PF07126 Cell-division protein ZapC AM352_RS17955 PF01180 Dihydroorotate dehydrogenase AM352_RS17965 PF03358 NADPH-dependent FMN reductase AM352_RS17970 PF09084 NMT1/THI5 like AM352_RS17975 PF00296 Luciferase-like monooxygenase AM352_RS17980 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS17985 PF00005 ABC transporter AM352_RS17990 PF01433 Peptidase family M1 domain AM352_RS17990 PF17432 Domain of unknown function (DUF3458_C) ARM repeats AM352_RS17990 PF11940 Domain of unknown function (DUF3458) Ig-like fold AM352_RS17995 PF17101 Stealth protein CR1, conserved region 1 AM352_RS17995 PF17103 Stealth protein CR4, conserved region 4 AM352_RS17995 PF11380 Stealth protein CR2, conserved region 2 AM352_RS18000 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family AM352_RS18000 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain AM352_RS18005 PF00152 tRNA synthetases class II (D, K and N) AM352_RS18005 PF01336 OB-fold nucleic acid binding domain AM352_RS18010 PF00267 Gram-negative porin AM352_RS18015 PF00155 Aminotransferase class I and II AM352_RS18020 PF00753 Metallo-beta-lactamase superfamily AM352_RS18025 PF05951 Bacterial protein of unknown function (DUF882) AM352_RS18035 PF01471 Putative peptidoglycan binding domain AM352_RS18035 PF03734 L,D-transpeptidase catalytic domain AM352_RS18040 PF04310 MukB N-terminal AM352_RS18040 PF16330 MukB hinge domain AM352_RS18045 PF04288 MukE-like family AM352_RS18050 PF17193 MukF C-terminal domain AM352_RS18050 PF17192 MukF middle domain AM352_RS18050 PF03882 MukF winged-helix domain AM352_RS18055 PF13847 Methyltransferase domain AM352_RS18065 PF02698 DUF218 domain AM352_RS18070 PF01636 Phosphotransferase enzyme family AM352_RS18075 PF02348 Cytidylyltransferase AM352_RS18080 PF03966 Trm112p-like protein AM352_RS18085 PF06224 Winged helix DNA-binding domain AM352_RS18090 PF02606 Tetraacyldisaccharide-1-P 4'-kinase AM352_RS18095 PF00664 ABC transporter transmembrane region AM352_RS18095 PF00005 ABC transporter AM352_RS18100 PF03772 Competence protein AM352_RS18100 PF00753 Metallo-beta-lactamase superfamily AM352_RS18105 PF00216 Bacterial DNA-binding protein AM352_RS18110 PF00575 S1 RNA binding domain AM352_RS18115 PF02224 Cytidylate kinase AM352_RS18125 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) AM352_RS18130 PF00266 Aminotransferase class-V AM352_RS18135 PF18381 YcaO cyclodehydratase C-terminal domain AM352_RS18135 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding AM352_RS18140 PF01226 Formate/nitrite transporter AM352_RS18145 PF01228 Glycine radical AM352_RS18145 PF02901 Pyruvate formate lyase-like AM352_RS18150 PF04055 Radical SAM superfamily AM352_RS18155 PF07690 Major Facilitator Superfamily AM352_RS18160 PF00857 Isochorismatase family AM352_RS18165 PF04976 DMSO reductase anchor subunit (DmsC) AM352_RS18170 PF13247 4Fe-4S dicluster domain AM352_RS18170 PF12800 4Fe-4S binding domain AM352_RS18175 PF00384 Molybdopterin oxidoreductase AM352_RS18175 PF01568 Molydopterin dinucleotide binding domain AM352_RS18175 PF04879 Molybdopterin oxidoreductase Fe4S4 domain AM352_RS18180 PF02403 Seryl-tRNA synthetase N-terminal domain AM352_RS18180 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM352_RS18185 PF12002 MgsA AAA+ ATPase C terminal AM352_RS18185 PF16193 AAA C-terminal domain AM352_RS18185 PF00004 ATPase family associated with various cellular activities (AAA) AM352_RS18190 PF03548 Outer membrane lipoprotein carrier protein LolA AM352_RS18195 PF13491 4TM region of DNA translocase FtsK/SpoIIIE AM352_RS18195 PF17854 FtsK alpha domain AM352_RS18195 PF09397 Ftsk gamma domain AM352_RS18195 PF01580 FtsK/SpoIIIE family AM352_RS18200 PF01037 Lrp/AsnC ligand binding domain AM352_RS18210 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS18215 PF00664 ABC transporter transmembrane region AM352_RS18215 PF00005 ABC transporter AM352_RS18220 PF00664 ABC transporter transmembrane region AM352_RS18220 PF00005 ABC transporter AM352_RS18225 PF03588 Leucyl/phenylalanyl-tRNA protein transferase AM352_RS18235 PF01176 Translation initiation factor 1A / IF-1 AM352_RS18240 PF03466 LysR substrate binding domain AM352_RS18240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS18245 PF02678 Pirin AM352_RS18245 PF05726 Pirin C-terminal cupin domain AM352_RS18250 PF00857 Isochorismatase family AM352_RS18260 PF09618 CRISPR-associated protein (Cas_Csy4) AM352_RS18265 PF07724 AAA domain (Cdc48 subfamily) AM352_RS18265 PF10431 C-terminal, D2-small domain, of ClpB protein AM352_RS18265 PF02861 Clp amino terminal domain, pathogenicity island component AM352_RS18265 PF17871 AAA lid domain AM352_RS18265 PF00004 ATPase family associated with various cellular activities (AAA) AM352_RS18270 PF02617 ATP-dependent Clp protease adaptor protein ClpS AM352_RS18275 PF00313 'Cold-shock' DNA-binding domain AM352_RS18280 PF12704 MacB-like periplasmic core domain AM352_RS18280 PF00005 ABC transporter AM352_RS18280 PF02687 FtsX-like permease family AM352_RS18285 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS18290 PF11398 Protein of unknown function (DUF2813) AM352_RS18295 PF00230 Major intrinsic protein AM352_RS18300 PF03956 Lysine exporter LysO AM352_RS18305 PF03063 Prismane/CO dehydrogenase family AM352_RS18310 PF00175 Oxidoreductase NAD-binding domain AM352_RS18310 PF00111 2Fe-2S iron-sulfur cluster binding domain AM352_RS18310 PF00970 Oxidoreductase FAD-binding domain AM352_RS18320 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain AM352_RS18320 PF00205 Thiamine pyrophosphate enzyme, central domain AM352_RS18320 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain AM352_RS18325 PF01212 Beta-eliminating lyase AM352_RS18330 PF13460 NAD(P)H-binding AM352_RS18330 PF11066 Protein of unknown function (DUF2867) AM352_RS18335 PF01370 NAD dependent epimerase/dehydratase family AM352_RS18340 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading AM352_RS18340 PF18416 N-acetylglucosamine binding protein domain 2 AM352_RS18345 PF01464 Transglycosylase SLT domain AM352_RS18350 PF08329 Chitinase A, N-terminal domain AM352_RS18350 PF00704 Glycosyl hydrolases family 18 AM352_RS18355 PF06750 Bacterial Peptidase A24 N-terminal domain AM352_RS18355 PF01478 Type IV leader peptidase family AM352_RS18365 PF12693 GspL periplasmic domain AM352_RS18365 PF05134 Type II secretion system (T2SS), protein L AM352_RS18370 PF03934 Type II secretion system (T2SS), protein K AM352_RS18375 PF07963 Prokaryotic N-terminal methylation motif AM352_RS18375 PF11612 Type II secretion system (T2SS), protein J AM352_RS18380 PF07963 Prokaryotic N-terminal methylation motif AM352_RS18380 PF02501 Type II secretion system (T2SS), protein I AM352_RS18385 PF07963 Prokaryotic N-terminal methylation motif AM352_RS18390 PF07963 Prokaryotic N-terminal methylation motif AM352_RS18390 PF08334 Type II secretion system (T2SS), protein G AM352_RS18395 PF00482 Type II secretion system (T2SS), protein F AM352_RS18400 PF00437 Type II/IV secretion system protein AM352_RS18405 PF00263 Bacterial type II and III secretion system protein AM352_RS18405 PF03958 Bacterial type II/III secretion system short domain AM352_RS18425 PF15977 Winged helix-turn-helix DNA binding AM352_RS18430 PF01510 N-acetylmuramoyl-L-alanine amidase AM352_RS18435 PF01906 Putative heavy-metal-binding AM352_RS18440 PF12883 Protein of unknown function (DUF3828) AM352_RS18445 PF00005 ABC transporter AM352_RS18450 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS18455 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18460 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18465 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS18470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS18470 PF00989 PAS fold AM352_RS18470 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS18470 PF16736 Single Cache-like AM352_RS18475 PF00486 Transcriptional regulatory protein, C terminal AM352_RS18475 PF00072 Response regulator receiver domain AM352_RS18480 PF05958 tRNA (Uracil-5-)-methyltransferase AM352_RS18485 PF10767 Protein of unknown function (DUF2593) AM352_RS18490 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18495 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18500 PF08402 TOBE domain AM352_RS18500 PF00005 ABC transporter AM352_RS18505 PF13416 Bacterial extracellular solute-binding protein AM352_RS18515 PF10722 Putative bacterial sensory transduction regulator AM352_RS18520 PF18030 RimK PreATP-grasp domain AM352_RS18520 PF08443 RimK-like ATP-grasp domain AM352_RS18525 PF00881 Nitroreductase family AM352_RS18530 PF07214 Protein of unknown function (DUF1418) AM352_RS18535 PF00462 Glutaredoxin AM352_RS18540 PF11045 Putative inner membrane protein of Enterobacteriaceae AM352_RS18545 PF06826 Predicted Permease Membrane Region AM352_RS18545 PF02080 TrkA-C domain AM352_RS18550 PF00440 Bacterial regulatory proteins, tetR family AM352_RS18555 PF07690 Major Facilitator Superfamily AM352_RS18565 PF07690 Major Facilitator Superfamily AM352_RS18570 PF01569 PAP2 superfamily AM352_RS18575 PF00455 DeoR C terminal sensor domain AM352_RS18575 PF08220 DeoR-like helix-turn-helix domain AM352_RS18580 PF00768 D-alanyl-D-alanine carboxypeptidase AM352_RS18580 PF07943 Penicillin-binding protein 5, C-terminal domain AM352_RS18585 PF00043 Glutathione S-transferase, C-terminal domain AM352_RS18585 PF13417 Glutathione S-transferase, N-terminal domain AM352_RS18590 PF07995 Glucose / Sorbosone dehydrogenase AM352_RS18595 PF10799 Biofilm formation protein (YliH/bssR) AM352_RS18600 PF18693 TRAM domain AM352_RS18600 PF00919 Uncharacterized protein family UPF0004 AM352_RS18600 PF04055 Radical SAM superfamily AM352_RS18605 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18605 PF12911 N-terminal TM domain of oligopeptide transport permease C AM352_RS18610 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS18620 PF00005 ABC transporter AM352_RS18620 PF08352 Oligopeptide/dipeptide transporter, C-terminal region AM352_RS18625 PF01112 Asparaginase AM352_RS18630 PF00994 Probable molybdopterin binding domain AM352_RS18630 PF03453 MoeA N-terminal region (domain I and II) AM352_RS18630 PF03454 MoeA C-terminal region (domain IV) AM352_RS18635 PF00899 ThiF family AM352_RS18640 PF00923 Transaldolase/Fructose-6-phosphate aldolase AM352_RS18645 PF04055 Radical SAM superfamily AM352_RS18650 PF02901 Pyruvate formate lyase-like AM352_RS18650 PF01228 Glycine radical AM352_RS18655 PF05638 Type VI secretion system effector, Hcp AM352_RS18675 PF07350 Protein of unknown function (DUF1479) AM352_RS18680 PF00356 Bacterial regulatory proteins, lacI family AM352_RS18685 PF07690 Major Facilitator Superfamily AM352_RS18690 PF16338 Domain of unknown function (DUF4968) AM352_RS18690 PF17137 Domain of unknown function (DUF5110) AM352_RS18690 PF01055 Glycosyl hydrolases family 31 AM352_RS18690 PF13802 Galactose mutarotase-like AM352_RS18700 PF12848 ABC transporter AM352_RS18700 PF00005 ABC transporter AM352_RS18705 PF17969 L,D-transpeptidase C-terminal domain AM352_RS18705 PF03734 L,D-transpeptidase catalytic domain AM352_RS18710 PF03600 Citrate transporter AM352_RS18715 PF01325 Iron dependent repressor, N-terminal DNA binding domain AM352_RS18715 PF02742 Iron dependent repressor, metal binding and dimerisation domain AM352_RS18725 PF00884 Sulfatase AM352_RS18730 PF13505 Outer membrane protein beta-barrel domain AM352_RS18735 PF00892 EamA-like transporter family AM352_RS18740 PF00210 Ferritin-like domain AM352_RS18745 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS18750 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS18755 PF00005 ABC transporter AM352_RS18760 PF00924 Mechanosensitive ion channel AM352_RS18765 PF05971 RNA methyltransferase AM352_RS18775 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM352_RS18780 PF07338 Protein of unknown function (DUF1471) AM352_RS18785 PF02885 Glycosyl transferase family, helical bundle domain AM352_RS18795 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS18795 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS18800 PF00577 Outer membrane usher protein AM352_RS18800 PF13954 PapC N-terminal domain AM352_RS18800 PF13953 PapC C-terminal domain AM352_RS18815 PF06733 DEAD_2 AM352_RS18815 PF13307 Helicase C-terminal domain AM352_RS18820 PF00271 Helicase conserved C-terminal domain AM352_RS18820 PF00270 DEAD/DEAH box helicase AM352_RS18825 PF09209 Tetracyclin repressor-like, C-terminal domain AM352_RS18825 PF00440 Bacterial regulatory proteins, tetR family AM352_RS18830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS18835 PF00005 ABC transporter AM352_RS18850 PF11076 Putative inner membrane protein YbhQ AM352_RS18855 PF03372 Endonuclease/Exonuclease/phosphatase family AM352_RS18860 PF13091 PLD-like domain AM352_RS18865 PF03706 Lysylphosphatidylglycerol synthase TM region AM352_RS18870 PF01027 Inhibitor of apoptosis-promoting Bax1 AM352_RS18875 PF02391 MoaE protein AM352_RS18880 PF02597 ThiS family AM352_RS18885 PF01967 MoaC family AM352_RS18890 PF00994 Probable molybdopterin binding domain AM352_RS18895 PF06463 Molybdenum Cofactor Synthesis C AM352_RS18895 PF04055 Radical SAM superfamily AM352_RS18900 PF01933 Uncharacterised protein family UPF0052 AM352_RS18905 PF12344 Ultra-violet resistance protein B AM352_RS18905 PF17757 UvrB interaction domain AM352_RS18905 PF00271 Helicase conserved C-terminal domain AM352_RS18905 PF04851 Type III restriction enzyme, res subunit AM352_RS18905 PF02151 UvrB/uvrC motif AM352_RS18920 PF08241 Methyltransferase domain AM352_RS18925 PF00155 Aminotransferase class I and II AM352_RS18930 PF06968 Biotin and Thiamin Synthesis associated domain AM352_RS18930 PF04055 Radical SAM superfamily AM352_RS18935 PF00202 Aminotransferase class-III AM352_RS18940 PF01161 Phosphatidylethanolamine-binding protein AM352_RS18945 PF00221 Aromatic amino acid lyase AM352_RS18950 PF17391 Urocanase N-terminal domain AM352_RS18950 PF17392 Urocanase C-terminal domain AM352_RS18950 PF01175 Urocanase Rossmann-like domain AM352_RS18955 PF07702 UTRA domain AM352_RS18955 PF00392 Bacterial regulatory proteins, gntR family AM352_RS18960 PF00491 Arginase family AM352_RS18965 PF01979 Amidohydrolase family AM352_RS18970 PF01095 Pectinesterase AM352_RS18975 PF00694 Aconitase C-terminal domain AM352_RS18975 PF00330 Aconitase family (aconitate hydratase) AM352_RS18980 PF00939 Sodium:sulfate symporter transmembrane region AM352_RS18985 PF04303 PrpF protein AM352_RS18990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS18990 PF03466 LysR substrate binding domain AM352_RS18995 PF10282 Lactonase, 7-bladed beta-propeller AM352_RS19005 PF00005 ABC transporter AM352_RS19005 PF03459 TOBE domain AM352_RS19010 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS19020 PF10766 Multidrug efflux pump-associated protein AcrZ AM352_RS19025 PF03459 TOBE domain AM352_RS19025 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS19030 PF00005 ABC transporter AM352_RS19035 PF16363 GDP-mannose 4,6 dehydratase AM352_RS19040 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain AM352_RS19040 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain AM352_RS19045 PF08544 GHMP kinases C terminal AM352_RS19045 PF00288 GHMP kinases N terminal domain AM352_RS19045 PF10509 Galactokinase galactose-binding signature AM352_RS19050 PF01263 Aldose 1-epimerase AM352_RS19055 PF00300 Histidine phosphatase superfamily (branch 1) AM352_RS19060 PF00005 ABC transporter AM352_RS19065 PF01032 FecCD transport family AM352_RS19075 PF00593 TonB dependent receptor AM352_RS19075 PF07715 TonB-dependent Receptor Plug Domain AM352_RS19080 PF00793 DAHP synthetase I family AM352_RS19090 PF13985 YbgS-like protein AM352_RS19095 PF01545 Cation efflux family AM352_RS19100 PF04973 Nicotinamide mononucleotide transporter AM352_RS19105 PF02445 Quinolinate synthetase A protein AM352_RS19135 PF13174 Tetratricopeptide repeat AM352_RS19135 PF16331 TolA binding protein trimerisation AM352_RS19140 PF00691 OmpA family AM352_RS19145 PF04052 TolB amino-terminal domain AM352_RS19145 PF07676 WD40-like Beta Propeller Repeat AM352_RS19150 PF06519 TolA C-terminal AM352_RS19155 PF02472 Biopolymer transport protein ExbD/TolR AM352_RS19160 PF01618 MotA/TolQ/ExbB proton channel family AM352_RS19165 PF03061 Thioesterase superfamily AM352_RS19170 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) AM352_RS19175 PF08173 Membrane bound YbgT-like protein AM352_RS19180 PF02322 Cytochrome bd terminal oxidase subunit II AM352_RS19185 PF01654 Cytochrome bd terminal oxidase subunit I AM352_RS19190 PF07748 Glycosyl hydrolases family 38 C-terminal domain AM352_RS19190 PF01074 Glycosyl hydrolases family 38 N-terminal domain AM352_RS19190 PF09261 Alpha mannosidase middle domain AM352_RS19195 PF02378 Phosphotransferase system, EIIC AM352_RS19195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 AM352_RS19195 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit AM352_RS19200 PF00392 Bacterial regulatory proteins, gntR family AM352_RS19200 PF07702 UTRA domain AM352_RS19205 PF02310 B12 binding domain AM352_RS19210 PF13941 MutL protein AM352_RS19215 PF06368 Methylaspartate mutase E chain (MutE) AM352_RS19220 PF05034 Methylaspartate ammonia-lyase N-terminus AM352_RS19220 PF07476 Methylaspartate ammonia-lyase C-terminus AM352_RS19235 PF00375 Sodium:dicarboxylate symporter family AM352_RS19240 PF05683 Fumarase C-terminus AM352_RS19240 PF05681 Fumarate hydratase (Fumerase) AM352_RS19245 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP AM352_RS19250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS19250 PF03466 LysR substrate binding domain AM352_RS19260 PF02629 CoA binding domain AM352_RS19260 PF00549 CoA-ligase AM352_RS19265 PF00549 CoA-ligase AM352_RS19265 PF08442 ATP-grasp domain AM352_RS19270 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM352_RS19270 PF02817 e3 binding domain AM352_RS19270 PF00364 Biotin-requiring enzyme AM352_RS19275 PF00676 Dehydrogenase E1 component AM352_RS19275 PF16870 2-oxoglutarate dehydrogenase C-terminal AM352_RS19275 PF16078 2-oxoglutarate dehydrogenase N-terminus AM352_RS19275 PF02779 Transketolase, pyrimidine binding domain AM352_RS19280 PF13085 2Fe-2S iron-sulfur cluster binding domain AM352_RS19285 PF02910 Fumarate reductase flavoprotein C-term AM352_RS19285 PF00890 FAD binding domain AM352_RS19290 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM352_RS19295 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit AM352_RS19305 PF00285 Citrate synthase, C-terminal domain AM352_RS19310 PF05638 Type VI secretion system effector, Hcp AM352_RS19315 PF01320 Colicin immunity protein / pyocin immunity protein AM352_RS19320 PF01320 Colicin immunity protein / pyocin immunity protein AM352_RS19325 PF10008 Uncharacterized protein conserved in bacteria (DUF2251) AM352_RS19330 PF05145 Transition state regulatory protein AbrB AM352_RS19340 PF07470 Glycosyl Hydrolase Family 88 AM352_RS19345 PF01306 LacY proton/sugar symporter AM352_RS19355 PF12833 Helix-turn-helix domain AM352_RS19355 PF02311 AraC-like ligand binding domain AM352_RS19360 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain AM352_RS19360 PF06827 Zinc finger found in FPG and IleRS AM352_RS19360 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain AM352_RS19365 PF01470 Pyroglutamyl peptidase AM352_RS19380 PF03746 LamB/YcsF family AM352_RS19385 PF02626 Carboxyltransferase domain, subdomain A and B AM352_RS19390 PF02682 Carboxyltransferase domain, subdomain C and D AM352_RS19395 PF01784 NIF3 (NGG1p interacting factor 3) AM352_RS19400 PF00854 POT family AM352_RS19410 PF10725 Protein of unknown function (DUF2517) AM352_RS19415 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) AM352_RS19420 PF03814 Potassium-transporting ATPase A subunit AM352_RS19430 PF02669 K+-transporting ATPase, c chain AM352_RS19435 PF13493 Domain of unknown function (DUF4118) AM352_RS19435 PF02702 Osmosensitive K+ channel His kinase sensor domain AM352_RS19435 PF13492 GAF domain AM352_RS19435 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS19435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS19440 PF00072 Response regulator receiver domain AM352_RS19440 PF00486 Transcriptional regulatory protein, C terminal AM352_RS19450 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM352_RS19450 PF01276 Orn/Lys/Arg decarboxylase, major domain AM352_RS19450 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM352_RS19455 PF13520 Amino acid permease AM352_RS19460 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM352_RS19460 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM352_RS19460 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM352_RS19460 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM352_RS19465 PF03925 SeqA protein C-terminal domain AM352_RS19465 PF17206 SeqA protein N-terminal domain AM352_RS19470 PF12697 Alpha/beta hydrolase family AM352_RS19475 PF01402 Ribbon-helix-helix protein, copG family AM352_RS19480 PF00258 Flavodoxin AM352_RS19490 PF01475 Ferric uptake regulator family AM352_RS19495 PF13982 YbfN-like lipoprotein AM352_RS19500 PF03573 outer membrane porin, OprD family AM352_RS19505 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain AM352_RS19505 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM352_RS19515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM352_RS19515 PF00367 phosphotransferase system, EIIB AM352_RS19515 PF02378 Phosphotransferase system, EIIC AM352_RS19520 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase AM352_RS19525 PF01979 Amidohydrolase family AM352_RS19530 PF01047 MarR family AM352_RS19530 PF00480 ROK family AM352_RS19535 PF13344 Haloacid dehalogenase-like hydrolase AM352_RS19540 PF00733 Asparagine synthase AM352_RS19540 PF13537 Glutamine amidotransferase domain AM352_RS19580 PF01494 FAD binding domain AM352_RS19585 PF00919 Uncharacterized protein family UPF0004 AM352_RS19585 PF01938 TRAM domain AM352_RS19585 PF04055 Radical SAM superfamily AM352_RS19590 PF02562 PhoH-like protein AM352_RS19595 PF02130 Uncharacterized protein family UPF0054 AM352_RS19600 PF03471 Transporter associated domain AM352_RS19600 PF00571 CBS domain AM352_RS19605 PF00795 Carbon-nitrogen hydrolase AM352_RS19610 PF00497 Bacterial extracellular solute-binding proteins, family 3 AM352_RS19615 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS19620 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS19625 PF00005 ABC transporter AM352_RS19630 PF01156 Inosine-uridine preferring nucleoside hydrolase AM352_RS19635 PF07295 Zinc-ribbon containing domain AM352_RS19640 PF13603 Leucyl-tRNA synthetase, Domain 2 AM352_RS19640 PF00133 tRNA synthetases class I (I, L, M and V) AM352_RS19640 PF08264 Anticodon-binding domain of tRNA AM352_RS19645 PF04390 Lipopolysaccharide-assembly AM352_RS19650 PF06144 DNA polymerase III, delta subunit AM352_RS19650 PF14840 Processivity clamp loader gamma complex DNA pol III C-term AM352_RS19655 PF01467 Cytidylyltransferase-like AM352_RS19660 PF00155 Aminotransferase class I and II AM352_RS19665 PF00300 Histidine phosphatase superfamily (branch 1) AM352_RS19675 PF02590 Predicted SPOUT methyltransferase AM352_RS19680 PF03717 Penicillin-binding Protein dimerisation domain AM352_RS19680 PF00905 Penicillin binding protein transpeptidase domain AM352_RS19685 PF01098 Cell cycle protein AM352_RS19690 PF03330 Lytic transglycolase AM352_RS19690 PF05036 Sporulation related domain AM352_RS19695 PF07943 Penicillin-binding protein 5, C-terminal domain AM352_RS19695 PF00768 D-alanyl-D-alanine carboxypeptidase AM352_RS19700 PF04359 Protein of unknown function (DUF493) AM352_RS19705 PF03099 Biotin/lipoate A/B protein ligase family AM352_RS19710 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS19710 PF03466 LysR substrate binding domain AM352_RS19715 PF04055 Radical SAM superfamily AM352_RS19715 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family AM352_RS19720 PF02416 mttA/Hcf106 family AM352_RS19725 PF00795 Carbon-nitrogen hydrolase AM352_RS19730 PF02537 CrcB-like protein, Camphor Resistance (CrcB) AM352_RS19735 PF00313 'Cold-shock' DNA-binding domain AM352_RS19740 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP AM352_RS19745 PF03606 C4-dicarboxylate anaerobic carrier AM352_RS19750 PF00072 Response regulator receiver domain AM352_RS19750 PF12431 Transcriptional regulator AM352_RS19755 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS19755 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain AM352_RS19755 PF00989 PAS fold AM352_RS19755 PF17203 Single cache domain 3 AM352_RS19760 PF08218 Citrate lyase ligase C-terminal domain AM352_RS19765 PF06857 Malonate decarboxylase delta subunit (MdcD) AM352_RS19770 PF03328 HpcH/HpaI aldolase/citrate lyase family AM352_RS19775 PF04223 Citrate lyase, alpha subunit (CitF) AM352_RS19780 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase AM352_RS19785 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase AM352_RS19790 PF00939 Sodium:sulfate symporter transmembrane region AM352_RS19795 PF00445 Ribonuclease T2 family AM352_RS19800 PF01272 Transcription elongation factor, GreA/GreB, C-term AM352_RS19800 PF14760 Rnk N-terminus AM352_RS19810 PF00582 Universal stress protein family AM352_RS19815 PF13192 Thioredoxin domain AM352_RS19815 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS19820 PF00578 AhpC/TSA family AM352_RS19820 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM352_RS19825 PF13098 Thioredoxin-like domain AM352_RS19830 PF03466 LysR substrate binding domain AM352_RS19830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS19835 PF11922 Domain of unknown function (DUF3440) AM352_RS19835 PF01507 Phosphoadenosine phosphosulfate reductase family AM352_RS19840 PF02195 ParB-like nuclease domain AM352_RS19845 PF00155 Aminotransferase class I and II AM352_RS19850 PF00465 Iron-containing alcohol dehydrogenase AM352_RS19855 PF04328 Selenoprotein, putative AM352_RS19860 PF02554 Carbon starvation protein CstA AM352_RS19860 PF13722 5TM C-terminal transporter carbon starvation CstA AM352_RS19865 PF03061 Thioesterase superfamily AM352_RS19875 PF00857 Isochorismatase family AM352_RS19875 PF00550 Phosphopantetheine attachment site AM352_RS19880 PF00501 AMP-binding enzyme AM352_RS19880 PF13193 AMP-binding enzyme C-terminal domain AM352_RS19885 PF00425 chorismate binding enzyme AM352_RS19890 PF01497 Periplasmic binding protein AM352_RS19895 PF05977 Transmembrane secretion effector AM352_RS19900 PF01032 FecCD transport family AM352_RS19905 PF01032 FecCD transport family AM352_RS19910 PF00005 ABC transporter AM352_RS19915 PF02706 Chain length determinant protein AM352_RS19920 PF00501 AMP-binding enzyme AM352_RS19920 PF13193 AMP-binding enzyme C-terminal domain AM352_RS19920 PF00668 Condensation domain AM352_RS19920 PF00550 Phosphopantetheine attachment site AM352_RS19920 PF00975 Thioesterase domain AM352_RS19925 PF03621 MbtH-like protein AM352_RS19930 PF00756 Putative esterase AM352_RS19930 PF11806 Domain of unknown function (DUF3327) AM352_RS19935 PF07715 TonB-dependent Receptor Plug Domain AM352_RS19935 PF00593 TonB dependent receptor AM352_RS19940 PF17837 4'-phosphopantetheinyl transferase N-terminal domain AM352_RS19940 PF01648 4'-phosphopantetheinyl transferase superfamily AM352_RS19945 PF02028 BCCT, betaine/carnitine/choline family transporter AM352_RS19955 PF13977 BetI-type transcriptional repressor, C-terminal AM352_RS19955 PF00440 Bacterial regulatory proteins, tetR family AM352_RS19960 PF00171 Aldehyde dehydrogenase family AM352_RS19965 PF05199 GMC oxidoreductase AM352_RS19965 PF00732 GMC oxidoreductase AM352_RS19970 PF04107 Glutamate-cysteine ligase family 2(GCS2) AM352_RS19975 PF06643 Protein of unknown function (DUF1158) AM352_RS19985 PF07715 TonB-dependent Receptor Plug Domain AM352_RS19985 PF00593 TonB dependent receptor AM352_RS19990 PF12833 Helix-turn-helix domain AM352_RS19995 PF12706 Beta-lactamase superfamily domain AM352_RS20005 PF13610 DDE domain AM352_RS20025 PF13610 DDE domain AM352_RS20040 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin AM352_RS20045 PF01850 PIN domain AM352_RS20055 PF00294 pfkB family carbohydrate kinase AM352_RS20065 PF02653 Branched-chain amino acid transport system / permease component AM352_RS20070 PF00005 ABC transporter AM352_RS20075 PF13407 Periplasmic binding protein domain AM352_RS20080 PF00356 Bacterial regulatory proteins, lacI family AM352_RS20095 PF00565 Staphylococcal nuclease homologue AM352_RS20100 PF13592 Winged helix-turn helix AM352_RS20100 PF13358 DDE superfamily endonuclease AM352_RS20115 PF13737 Transposase DDE domain AM352_RS20135 PF02899 Phage integrase, N-terminal SAM-like domain AM352_RS20135 PF00589 Phage integrase family AM352_RS20140 PF00376 MerR family regulatory protein AM352_RS20140 PF09278 MerR, DNA binding AM352_RS20145 PF02411 MerT mercuric transport protein AM352_RS20150 PF00403 Heavy-metal-associated domain AM352_RS20155 PF03203 MerC mercury resistance protein AM352_RS20160 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM352_RS20160 PF00403 Heavy-metal-associated domain AM352_RS20160 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS20165 PF13411 MerR HTH family regulatory protein AM352_RS20170 PF05052 MerE protein AM352_RS20180 PF00563 EAL domain AM352_RS20180 PF11809 Domain of unknown function (DUF3330) AM352_RS20190 PF00239 Resolvase, N terminal domain AM352_RS20190 PF02796 Helix-turn-helix domain of resolvase AM352_RS20200 PF13610 DDE domain AM352_RS20210 PF02371 Transposase IS116/IS110/IS902 family AM352_RS20210 PF01548 Transposase AM352_RS20220 PF13610 DDE domain AM352_RS20230 PF00210 Ferritin-like domain AM352_RS20260 PF13610 DDE domain AM352_RS20275 PF13610 DDE domain AM352_RS20295 PF02195 ParB-like nuclease domain AM352_RS20295 PF08775 ParB family AM352_RS20300 PF18607 ParA helix turn helix domain AM352_RS20300 PF13614 AAA domain AM352_RS20305 PF02796 Helix-turn-helix domain of resolvase AM352_RS20305 PF00239 Resolvase, N terminal domain AM352_RS20315 PF04754 Putative transposase, YhgA-like AM352_RS20355 PF01380 SIS domain AM352_RS20355 PF01418 Helix-turn-helix domain, rpiR family AM352_RS20360 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 AM352_RS20360 PF00367 phosphotransferase system, EIIB AM352_RS20360 PF02378 Phosphotransferase system, EIIC AM352_RS20365 PF02502 Ribose/Galactose Isomerase AM352_RS20370 PF00834 Ribulose-phosphate 3 epimerase family AM352_RS20380 PF01609 Transposase DDE domain AM352_RS20380 PF05598 Transposase domain (DUF772) AM352_RS20420 PF00419 Fimbrial protein AM352_RS20425 PF13954 PapC N-terminal domain AM352_RS20425 PF13953 PapC C-terminal domain AM352_RS20425 PF00577 Outer membrane usher protein AM352_RS20430 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS20430 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS20435 PF00419 Fimbrial protein AM352_RS20450 PF00239 Resolvase, N terminal domain AM352_RS20450 PF02796 Helix-turn-helix domain of resolvase AM352_RS20470 PF02028 BCCT, betaine/carnitine/choline family transporter AM352_RS20475 PF10011 Predicted membrane protein (DUF2254) AM352_RS20480 PF05598 Transposase domain (DUF772) AM352_RS20480 PF01609 Transposase DDE domain AM352_RS20495 PF00356 Bacterial regulatory proteins, lacI family AM352_RS20500 PF00294 pfkB family carbohydrate kinase AM352_RS20510 PF00834 Ribulose-phosphate 3 epimerase family AM352_RS20525 PF05717 IS66 Orf2 like protein AM352_RS20530 PF13005 zinc-finger binding domain of transposase IS66 AM352_RS20530 PF03050 Transposase IS66 family AM352_RS20530 PF13817 IS66 C-terminal element AM352_RS20530 PF13007 Transposase C of IS166 homeodomain AM352_RS20540 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS20540 PF00672 HAMP domain AM352_RS20540 PF02203 Tar ligand binding domain homologue AM352_RS20545 PF13610 DDE domain AM352_RS20565 PF13610 DDE domain AM352_RS20570 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) AM352_RS20570 PF00672 HAMP domain AM352_RS20570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS20570 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS20570 PF01627 Hpt domain AM352_RS20570 PF00072 Response regulator receiver domain AM352_RS20575 PF00072 Response regulator receiver domain AM352_RS20590 PF05598 Transposase domain (DUF772) AM352_RS20590 PF01609 Transposase DDE domain AM352_RS20600 PF01609 Transposase DDE domain AM352_RS20600 PF05598 Transposase domain (DUF772) AM352_RS20610 PF01548 Transposase AM352_RS20610 PF02371 Transposase IS116/IS110/IS902 family AM352_RS20620 PF04542 Sigma-70 region 2 AM352_RS20620 PF04545 Sigma-70, region 4 AM352_RS20640 PF00582 Universal stress protein family AM352_RS20645 PF00916 Sulfate permease family AM352_RS20645 PF01740 STAS domain AM352_RS20650 PF01548 Transposase AM352_RS20650 PF02371 Transposase IS116/IS110/IS902 family AM352_RS20660 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS20660 PF03707 Bacterial signalling protein N terminal repeat AM352_RS20660 PF00563 EAL domain AM352_RS20680 PF07670 Nucleoside recognition AM352_RS20685 PF07670 Nucleoside recognition AM352_RS20690 PF01979 Amidohydrolase family AM352_RS20705 PF01527 Transposase AM352_RS20715 PF13817 IS66 C-terminal element AM352_RS20715 PF13007 Transposase C of IS166 homeodomain AM352_RS20715 PF13005 zinc-finger binding domain of transposase IS66 AM352_RS20715 PF03050 Transposase IS66 family AM352_RS20720 PF05717 IS66 Orf2 like protein AM352_RS20730 PF02203 Tar ligand binding domain homologue AM352_RS20730 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain AM352_RS20730 PF00672 HAMP domain AM352_RS20755 PF05717 IS66 Orf2 like protein AM352_RS20765 PF01555 DNA methylase AM352_RS20765 PF18273 Type III R-M EcoP15I C-terminal domain AM352_RS20770 PF00239 Resolvase, N terminal domain AM352_RS20770 PF02796 Helix-turn-helix domain of resolvase AM352_RS20775 PF13700 Domain of unknown function (DUF4158) AM352_RS20775 PF01526 Tn3 transposase DDE domain AM352_RS20795 PF01609 Transposase DDE domain AM352_RS20795 PF05598 Transposase domain (DUF772) AM352_RS20800 PF00440 Bacterial regulatory proteins, tetR family AM352_RS20805 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM352_RS20805 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM352_RS20805 PF00703 Glycosyl hydrolases family 2 AM352_RS20815 PF03573 outer membrane porin, OprD family AM352_RS20820 PF03786 D-mannonate dehydratase (UxuA) AM352_RS20825 PF08125 Mannitol dehydrogenase C-terminal domain AM352_RS20825 PF01232 Mannitol dehydrogenase Rossmann domain AM352_RS20830 PF02614 Glucuronate isomerase AM352_RS20835 PF00392 Bacterial regulatory proteins, gntR family AM352_RS20835 PF07729 FCD domain AM352_RS20840 PF13610 DDE domain AM352_RS20850 PF00589 Phage integrase family AM352_RS20850 PF13495 Phage integrase, N-terminal SAM-like domain AM352_RS20855 PF00186 Dihydrofolate reductase AM352_RS20860 PF13427 Domain of unknown function (DUF4111) AM352_RS20865 PF00893 Small Multidrug Resistance protein AM352_RS20870 PF00809 Pterin binding enzyme AM352_RS20885 PF01548 Transposase AM352_RS20885 PF02371 Transposase IS116/IS110/IS902 family AM352_RS20895 PF03551 Transcriptional regulator PadR-like family AM352_RS20905 PF13610 DDE domain AM352_RS20930 PF01636 Phosphotransferase enzyme family AM352_RS20940 PF13610 DDE domain AM352_RS20945 PF02522 Aminoglycoside 3-N-acetyltransferase AM352_RS20985 PF13700 Domain of unknown function (DUF4158) AM352_RS20985 PF01526 Tn3 transposase DDE domain AM352_RS20990 PF00239 Resolvase, N terminal domain AM352_RS20990 PF02796 Helix-turn-helix domain of resolvase AM352_RS21000 PF01636 Phosphotransferase enzyme family AM352_RS21005 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase AM352_RS21020 PF00892 EamA-like transporter family AM352_RS21025 PF07690 Major Facilitator Superfamily AM352_RS21030 PF02909 Tetracyclin repressor-like, C-terminal domain AM352_RS21030 PF00440 Bacterial regulatory proteins, tetR family AM352_RS21040 PF13610 DDE domain AM352_RS21050 PF00239 Resolvase, N terminal domain AM352_RS21050 PF02796 Helix-turn-helix domain of resolvase AM352_RS21070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain AM352_RS21070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III AM352_RS21070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II AM352_RS21070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I AM352_RS21075 PF00809 Pterin binding enzyme AM352_RS21090 PF02371 Transposase IS116/IS110/IS902 family AM352_RS21090 PF01548 Transposase AM352_RS21095 PF01526 Tn3 transposase DDE domain AM352_RS21095 PF13700 Domain of unknown function (DUF4158) AM352_RS21100 PF00239 Resolvase, N terminal domain AM352_RS21100 PF02796 Helix-turn-helix domain of resolvase AM352_RS21110 PF13610 DDE domain AM352_RS21115 PF16295 Tetracyclin repressor-like, C-terminal domain AM352_RS21115 PF00440 Bacterial regulatory proteins, tetR family AM352_RS21120 PF04237 YjbR AM352_RS21125 PF00881 Nitroreductase family AM352_RS21140 PF07690 Major Facilitator Superfamily AM352_RS21145 PF00924 Mechanosensitive ion channel AM352_RS21150 PF00356 Bacterial regulatory proteins, lacI family AM352_RS21165 PF03825 Nucleoside H+ symporter AM352_RS21170 PF00324 Amino acid permease AM352_RS21190 PF00873 AcrB/AcrD/AcrF family AM352_RS21195 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS21195 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS21200 PF11604 Copper binding periplasmic protein CusF AM352_RS21205 PF02321 Outer membrane efflux protein AM352_RS21210 PF00486 Transcriptional regulatory protein, C terminal AM352_RS21210 PF00072 Response regulator receiver domain AM352_RS21215 PF00672 HAMP domain AM352_RS21215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS21215 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS21230 PF00196 Bacterial regulatory proteins, luxR family AM352_RS21245 PF00196 Bacterial regulatory proteins, luxR family AM352_RS21245 PF00072 Response regulator receiver domain AM352_RS21250 PF00419 Fimbrial protein AM352_RS21255 PF00419 Fimbrial protein AM352_RS21260 PF13954 PapC N-terminal domain AM352_RS21260 PF00577 Outer membrane usher protein AM352_RS21260 PF13953 PapC C-terminal domain AM352_RS21265 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS21265 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS21275 PF00419 Fimbrial protein AM352_RS21280 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain AM352_RS21280 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain AM352_RS21290 PF09190 DALR domain AM352_RS21290 PF01406 tRNA synthetases class I (C) catalytic domain AM352_RS21295 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD AM352_RS21300 PF12850 Calcineurin-like phosphoesterase superfamily domain AM352_RS21310 PF00731 AIR carboxylase AM352_RS21315 PF02222 ATP-grasp domain AM352_RS21315 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain AM352_RS21325 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS21330 PF09383 NIL domain AM352_RS21330 PF00005 ABC transporter AM352_RS21335 PF03180 NLPA lipoprotein AM352_RS21340 PF00267 Gram-negative porin AM352_RS21350 PF00005 ABC transporter AM352_RS21355 PF13472 GDSL-like Lipase/Acylhydrolase family AM352_RS21360 PF00106 short chain dehydrogenase AM352_RS21365 PF00085 Thioredoxin AM352_RS21370 PF03649 Uncharacterised protein family (UPF0014) AM352_RS21375 PF00005 ABC transporter AM352_RS21380 PF16200 C-terminal region of band_7 AM352_RS21380 PF01145 SPFH domain / Band 7 family AM352_RS21385 PF01957 NfeD-like C-terminal, partner-binding AM352_RS21390 PF13411 MerR HTH family regulatory protein AM352_RS21395 PF07715 TonB-dependent Receptor Plug Domain AM352_RS21400 PF01497 Periplasmic binding protein AM352_RS21405 PF04055 Radical SAM superfamily AM352_RS21410 PF06228 Haem utilisation ChuX/HutX AM352_RS21420 PF01032 FecCD transport family AM352_RS21425 PF00005 ABC transporter AM352_RS21430 PF00083 Sugar (and other) transporter AM352_RS21430 PF07690 Major Facilitator Superfamily AM352_RS21435 PF00356 Bacterial regulatory proteins, lacI family AM352_RS21440 PF01156 Inosine-uridine preferring nucleoside hydrolase AM352_RS21445 PF02308 MgtC family AM352_RS21450 PF00403 Heavy-metal-associated domain AM352_RS21455 PF01963 TraB family AM352_RS21460 PF04073 Aminoacyl-tRNA editing domain AM352_RS21465 PF00149 Calcineurin-like phosphoesterase AM352_RS21465 PF02872 5'-nucleotidase, C-terminal domain AM352_RS21470 PF07690 Major Facilitator Superfamily AM352_RS21475 PF02254 TrkA-N domain AM352_RS21475 PF00999 Sodium/hydrogen exchanger family AM352_RS21485 PF00294 pfkB family carbohydrate kinase AM352_RS21490 PF07859 alpha/beta hydrolase fold AM352_RS21495 PF00762 Ferrochelatase AM352_RS21500 PF05191 Adenylate kinase, active site lid AM352_RS21510 PF00183 Hsp90 protein AM352_RS21510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS21515 PF02132 RecR protein AM352_RS21515 PF13662 Toprim domain AM352_RS21520 PF02575 YbaB/EbfC DNA-binding family AM352_RS21525 PF12170 DNA polymerase III tau subunit V interacting with alpha AM352_RS21525 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding AM352_RS21525 PF12169 DNA polymerase III subunits gamma and tau domain III AM352_RS21530 PF00156 Phosphoribosyl transferase domain AM352_RS21540 PF04304 Protein of unknown function (DUF454) AM352_RS21545 PF07445 Primosomal replication protein priC AM352_RS21550 PF10689 Protein of unknown function (DUF2496) AM352_RS21555 PF04754 Putative transposase, YhgA-like AM352_RS21560 PF12794 Mechanosensitive ion channel inner membrane domain 1 AM352_RS21560 PF12795 Mechanosensitive ion channel porin domain AM352_RS21560 PF00924 Mechanosensitive ion channel AM352_RS21565 PF08361 MAATS-type transcriptional repressor, C-terminal region AM352_RS21565 PF00440 Bacterial regulatory proteins, tetR family AM352_RS21570 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS21570 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS21575 PF00873 AcrB/AcrD/AcrF family AM352_RS21580 PF10757 Biofilm formation regulator YbaJ AM352_RS21585 PF05321 Haemolysin expression modulating protein AM352_RS21590 PF12464 Maltose acetyltransferase AM352_RS21590 PF14602 Hexapeptide repeat of succinyl-transferase AM352_RS21595 PF10777 Inner membrane protein YlaC AM352_RS21600 PF00444 Ribosomal protein L36 AM352_RS21605 PF01197 Ribosomal protein L31 AM352_RS21610 PF00563 EAL domain AM352_RS21610 PF12792 CSS motif domain associated with EAL AM352_RS21615 PF07237 Protein of unknown function (DUF1428) AM352_RS21625 PF00155 Aminotransferase class I and II AM352_RS21625 PF00392 Bacterial regulatory proteins, gntR family AM352_RS21645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain AM352_RS21650 PF09619 Type III secretion system lipoprotein chaperone (YscW) AM352_RS21660 PF00909 Ammonium Transporter Family AM352_RS21665 PF00543 Nitrogen regulatory protein P-II AM352_RS21675 PF00005 ABC transporter AM352_RS21675 PF00664 ABC transporter transmembrane region AM352_RS21680 PF00005 ABC transporter AM352_RS21680 PF00664 ABC transporter transmembrane region AM352_RS21685 PF01037 Lrp/AsnC ligand binding domain AM352_RS21685 PF13404 AsnC-type helix-turn-helix domain AM352_RS21690 PF00291 Pyridoxal-phosphate dependent enzyme AM352_RS21700 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle AM352_RS21700 PF12793 Sugar transport-related sRNA regulator N-term AM352_RS21705 PF06508 Queuosine biosynthesis protein QueC AM352_RS21720 PF13145 PPIC-type PPIASE domain AM352_RS21725 PF00216 Bacterial DNA-binding protein AM352_RS21730 PF00004 ATPase family associated with various cellular activities (AAA) AM352_RS21730 PF02190 ATP-dependent protease La (LON) substrate-binding domain AM352_RS21730 PF05362 Lon protease (S16) C-terminal proteolytic domain AM352_RS21735 PF07724 AAA domain (Cdc48 subfamily) AM352_RS21735 PF10431 C-terminal, D2-small domain, of ClpB protein AM352_RS21735 PF06689 ClpX C4-type zinc finger AM352_RS21745 PF00574 Clp protease AM352_RS21750 PF05698 Bacterial trigger factor protein (TF) C-terminus AM352_RS21750 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase AM352_RS21750 PF05697 Bacterial trigger factor protein (TF) AM352_RS21755 PF01722 BolA-like protein AM352_RS21765 PF08139 Prokaryotic membrane lipoprotein lipid attachment site AM352_RS21765 PF03923 Uncharacterized lipoprotein AM352_RS21770 PF07690 Major Facilitator Superfamily AM352_RS21775 PF06481 COX Aromatic Rich Motif AM352_RS21775 PF00116 Cytochrome C oxidase subunit II, periplasmic domain AM352_RS21780 PF00115 Cytochrome C and Quinol oxidase polypeptide I AM352_RS21785 PF00510 Cytochrome c oxidase subunit III AM352_RS21790 PF03626 Prokaryotic Cytochrome C oxidase subunit IV AM352_RS21795 PF01040 UbiA prenyltransferase family AM352_RS21800 PF07690 Major Facilitator Superfamily AM352_RS21805 PF04461 Protein of unknown function (DUF520) AM352_RS21810 PF08546 Ketopantoate reductase PanE/ApbA C terminal AM352_RS21810 PF02558 Ketopantoate reductase PanE/ApbA AM352_RS21815 PF01965 DJ-1/PfpI family AM352_RS21820 PF02926 THUMP domain AM352_RS21820 PF02568 Thiamine biosynthesis protein (ThiI) AM352_RS21825 PF02609 Exonuclease VII small subunit AM352_RS21830 PF00348 Polyprenyl synthetase AM352_RS21835 PF02779 Transketolase, pyrimidine binding domain AM352_RS21835 PF02780 Transketolase, C-terminal domain AM352_RS21835 PF13292 1-deoxy-D-xylulose-5-phosphate synthase AM352_RS21840 PF00248 Aldo/keto reductase family AM352_RS21845 PF04608 Phosphatidylglycerophosphatase A AM352_RS21850 PF02769 AIR synthase related protein, C-terminal domain AM352_RS21850 PF00586 AIR synthase related protein, N-terminal domain AM352_RS21855 PF01029 NusB family AM352_RS21860 PF00885 6,7-dimethyl-8-ribityllumazine synthase AM352_RS21865 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region AM352_RS21865 PF01872 RibD C-terminal domain AM352_RS21870 PF03477 ATP cone domain AM352_RS21875 PF11622 Protein of unknown function (DUF3251) AM352_RS21880 PF03502 Nucleoside-specific channel-forming protein, Tsx AM352_RS21885 PF01844 HNH endonuclease AM352_RS21890 PF07549 SecD/SecF GG Motif AM352_RS21890 PF02355 Protein export membrane protein AM352_RS21895 PF07549 SecD/SecF GG Motif AM352_RS21895 PF13721 SecD export protein N-terminal TM region AM352_RS21895 PF02355 Protein export membrane protein AM352_RS21900 PF02699 Preprotein translocase subunit AM352_RS21905 PF01702 Queuine tRNA-ribosyltransferase AM352_RS21910 PF02547 Queuosine biosynthesis protein AM352_RS21915 PF04336 Acyl carrier protein phosphodiesterase AM352_RS21920 PF00578 AhpC/TSA family AM352_RS21920 PF10417 C-terminal domain of 1-Cys peroxiredoxin AM352_RS21935 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS21935 PF03466 LysR substrate binding domain AM352_RS21940 PF00128 Alpha amylase, catalytic domain AM352_RS21940 PF02903 Alpha amylase, N-terminal ig-like domain AM352_RS21945 PF00324 Amino acid permease AM352_RS21950 PF05525 Branched-chain amino acid transport protein AM352_RS21955 PF00989 PAS fold AM352_RS21955 PF00512 His Kinase A (phospho-acceptor) domain AM352_RS21955 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS21955 PF11808 Phosphate regulon sensor protein PhoR AM352_RS21960 PF00486 Transcriptional regulatory protein, C terminal AM352_RS21960 PF00072 Response regulator receiver domain AM352_RS21965 PF00149 Calcineurin-like phosphoesterase AM352_RS21965 PF12320 Type 5 capsule protein repressor C-terminal domain AM352_RS21970 PF13476 AAA domain AM352_RS21975 PF00480 ROK family AM352_RS21980 PF04381 Putative exonuclease, RdgC AM352_RS21985 PF06865 Pyrimidine/purine nucleoside phosphorylase AM352_RS21990 PF07302 AroM protein AM352_RS21995 PF16362 YaiA protein AM352_RS22000 PF01202 Shikimate kinase AM352_RS22005 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 AM352_RS22010 PF03807 NADP oxidoreductase coenzyme F420-dependent AM352_RS22010 PF14748 Pyrroline-5-carboxylate reductase dimerisation AM352_RS22015 PF05230 MASE2 domain AM352_RS22015 PF00990 Diguanylate cyclase, GGDEF domain AM352_RS22020 PF07769 psiF repeat AM352_RS22025 PF00245 Alkaline phosphatase AM352_RS22030 PF10796 Sigma-S stabilisation anti-adaptor protein AM352_RS22035 PF00356 Bacterial regulatory proteins, lacI family AM352_RS22040 PF07690 Major Facilitator Superfamily AM352_RS22045 PF00106 short chain dehydrogenase AM352_RS22050 PF00083 Sugar (and other) transporter AM352_RS22050 PF07690 Major Facilitator Superfamily AM352_RS22060 PF01820 D-ala D-ala ligase N-terminus AM352_RS22060 PF07478 D-ala D-ala ligase C-terminus AM352_RS22065 PF10953 Protein of unknown function (DUF2754) AM352_RS22070 PF10954 Protein of unknown function (DUF2755) AM352_RS22075 PF07759 Protein of unknown function (DUF1615) AM352_RS22080 PF05992 SbmA/BacA-like family AM352_RS22085 PF00144 Beta-lactamase AM352_RS22090 PF15977 Winged helix-turn-helix DNA binding AM352_RS22095 PF03797 Autotransporter beta-domain AM352_RS22100 PF00490 Delta-aminolevulinic acid dehydratase AM352_RS22110 PF02668 Taurine catabolism dioxygenase TauD, TfdA family AM352_RS22115 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS22120 PF00005 ABC transporter AM352_RS22125 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM352_RS22130 PF00196 Bacterial regulatory proteins, luxR family AM352_RS22130 PF00072 Response regulator receiver domain AM352_RS22135 PF05231 MASE1 AM352_RS22135 PF07730 Histidine kinase AM352_RS22135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase AM352_RS22140 PF07690 Major Facilitator Superfamily AM352_RS22150 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS22155 PF00005 ABC transporter AM352_RS22155 PF08402 TOBE domain AM352_RS22160 PF02574 Homocysteine S-methyltransferase AM352_RS22165 PF00356 Bacterial regulatory proteins, lacI family AM352_RS22170 PF00703 Glycosyl hydrolases family 2 AM352_RS22170 PF02836 Glycosyl hydrolases family 2, TIM barrel domain AM352_RS22170 PF02837 Glycosyl hydrolases family 2, sugar binding domain AM352_RS22170 PF02929 Beta galactosidase small chain AM352_RS22170 PF16353 Domain of unknown function(DUF4981) AM352_RS22175 PF13193 AMP-binding enzyme C-terminal domain AM352_RS22175 PF16177 Acetyl-coenzyme A synthetase N-terminus AM352_RS22175 PF00501 AMP-binding enzyme AM352_RS22180 PF03972 MmgE/PrpD family AM352_RS22185 PF00285 Citrate synthase, C-terminal domain AM352_RS22195 PF00158 Sigma-54 interaction domain AM352_RS22195 PF06506 Propionate catabolism activator AM352_RS22195 PF02954 Bacterial regulatory protein, Fis family AM352_RS22200 PF07338 Protein of unknown function (DUF1471) AM352_RS22205 PF01810 LysE type translocator AM352_RS22210 PF07690 Major Facilitator Superfamily AM352_RS22215 PF02321 Outer membrane efflux protein AM352_RS22220 PF00873 AcrB/AcrD/AcrF family AM352_RS22225 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion AM352_RS22225 PF00529 HlyD membrane-fusion protein of T1SS AM352_RS22230 PF00440 Bacterial regulatory proteins, tetR family AM352_RS22230 PF17932 Tetracyclin repressor-like, C-terminal domain AM352_RS22235 PF01380 SIS domain AM352_RS22235 PF01418 Helix-turn-helix domain, rpiR family AM352_RS22245 PF01032 FecCD transport family AM352_RS22250 PF01032 FecCD transport family AM352_RS22255 PF00005 ABC transporter AM352_RS22260 PF07715 TonB-dependent Receptor Plug Domain AM352_RS22270 PF01212 Beta-eliminating lyase AM352_RS22275 PF03222 Tryptophan/tyrosine permease family AM352_RS22285 PF06406 StbA protein AM352_RS22290 PF00877 NlpC/P60 family AM352_RS22295 PF13677 Membrane MotB of proton-channel complex MotA/MotB AM352_RS22295 PF00691 OmpA family AM352_RS22300 PF01618 MotA/TolQ/ExbB proton channel family AM352_RS22305 PF04545 Sigma-70, region 4 AM352_RS22305 PF04542 Sigma-70 region 2 AM352_RS22330 PF02465 Flagellar hook-associated protein 2 N-terminus AM352_RS22330 PF07196 Flagellin hook IN motif AM352_RS22330 PF07195 Flagellar hook-associated protein 2 C-terminus AM352_RS22335 PF00669 Bacterial flagellin N-terminal helical region AM352_RS22335 PF00700 Bacterial flagellin C-terminal helical region AM352_RS22340 PF00669 Bacterial flagellin N-terminal helical region AM352_RS22340 PF00700 Bacterial flagellin C-terminal helical region AM352_RS22365 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS22365 PF00460 Flagella basal body rod protein AM352_RS22375 PF02119 Flagellar P-ring protein AM352_RS22380 PF02107 Flagellar L-ring protein AM352_RS22385 PF00460 Flagella basal body rod protein AM352_RS22385 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS22390 PF00460 Flagella basal body rod protein AM352_RS22390 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS22395 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS22395 PF07559 Flagellar basal body protein FlaE AM352_RS22395 PF00460 Flagella basal body rod protein AM352_RS22405 PF06429 Flagellar basal body rod FlgEFG protein C-terminal AM352_RS22405 PF00460 Flagella basal body rod protein AM352_RS22410 PF00460 Flagella basal body rod protein AM352_RS22430 PF01209 ubiE/COQ5 methyltransferase family AM352_RS22435 PF00535 Glycosyl transferase family 2 AM352_RS22435 PF01501 Glycosyl transferase family 8 AM352_RS22460 PF18269 T3SS EscN ATPase C-terminal domain AM352_RS22460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain AM352_RS22470 PF14842 FliG N-terminal domain AM352_RS22470 PF14841 FliG middle domain AM352_RS22470 PF01706 FliG C-terminal domain AM352_RS22475 PF08345 Flagellar M-ring protein C-terminal AM352_RS22475 PF01514 Secretory protein of YscJ/FliF family AM352_RS22480 PF02049 Flagellar hook-basal body complex protein FliE AM352_RS22485 PF00158 Sigma-54 interaction domain AM352_RS22485 PF02954 Bacterial regulatory protein, Fis family AM352_RS22485 PF00072 Response regulator receiver domain AM352_RS22495 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term AM352_RS22500 PF00813 FliP family AM352_RS22505 PF01313 Bacterial export proteins, family 3 AM352_RS22510 PF01311 Bacterial export proteins, family 1 AM352_RS22515 PF01312 FlhB HrpN YscU SpaS Family AM352_RS22520 PF00771 FHIPEP family AM352_RS22535 PF12792 CSS motif domain associated with EAL AM352_RS22535 PF00563 EAL domain AM352_RS22560 PF02311 AraC-like ligand binding domain AM352_RS22560 PF12833 Helix-turn-helix domain AM352_RS22575 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS22575 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS22580 PF00577 Outer membrane usher protein AM352_RS22580 PF13954 PapC N-terminal domain AM352_RS22580 PF13953 PapC C-terminal domain AM352_RS22610 PF04069 Substrate binding domain of ABC-type glycine betaine transport system AM352_RS22615 PF00221 Aromatic amino acid lyase AM352_RS22620 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS22625 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS22630 PF00005 ABC transporter AM352_RS22630 PF00571 CBS domain AM352_RS22635 PF02423 Ornithine cyclodeaminase/mu-crystallin family AM352_RS22645 PF03466 LysR substrate binding domain AM352_RS22645 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS22650 PF02653 Branched-chain amino acid transport system / permease component AM352_RS22655 PF02653 Branched-chain amino acid transport system / permease component AM352_RS22655 PF11862 Domain of unknown function (DUF3382) AM352_RS22660 PF12399 Branched-chain amino acid ATP-binding cassette transporter AM352_RS22660 PF00005 ABC transporter AM352_RS22665 PF00005 ABC transporter AM352_RS22670 PF13458 Periplasmic binding protein AM352_RS22680 PF01546 Peptidase family M20/M25/M40 AM352_RS22680 PF07687 Peptidase dimerisation domain AM352_RS22690 PF01717 Cobalamin-independent synthase, Catalytic domain AM352_RS22690 PF08267 Cobalamin-independent synthase, N-terminal domain AM352_RS22705 PF13407 Periplasmic binding protein domain AM352_RS22705 PF00356 Bacterial regulatory proteins, lacI family AM352_RS22710 PF00251 Glycosyl hydrolases family 32 N-terminal domain AM352_RS22710 PF08244 Glycosyl hydrolases family 32 C terminal AM352_RS22715 PF00367 phosphotransferase system, EIIB AM352_RS22715 PF02378 Phosphotransferase system, EIIC AM352_RS22720 PF11471 Maltoporin periplasmic N-terminal extension AM352_RS22720 PF02264 LamB porin AM352_RS22725 PF00294 pfkB family carbohydrate kinase AM352_RS22815 PF14659 Phage integrase, N-terminal SAM-like domain AM352_RS22815 PF13356 Arm DNA-binding domain AM352_RS22815 PF00589 Phage integrase family AM352_RS22825 PF00171 Aldehyde dehydrogenase family AM352_RS22830 PF00696 Amino acid kinase family AM352_RS22830 PF01472 PUA domain AM352_RS22835 PF00267 Gram-negative porin AM352_RS22840 PF07417 Sigma factor-binding transcriptional regulator Crl AM352_RS22845 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) AM352_RS22850 PF00156 Phosphoribosyl transferase domain AM352_RS22855 PF01546 Peptidase family M20/M25/M40 AM352_RS22855 PF07687 Peptidase dimerisation domain AM352_RS22860 PF00817 impB/mucB/samB family AM352_RS22860 PF11799 impB/mucB/samB family C-terminal domain AM352_RS22860 PF11798 IMS family HHH motif AM352_RS22865 PF03734 L,D-transpeptidase catalytic domain AM352_RS22870 PF13230 Glutamine amidotransferases class-II AM352_RS22875 PF13580 SIS domain AM352_RS22880 PF02771 Acyl-CoA dehydrogenase, N-terminal domain AM352_RS22880 PF02770 Acyl-CoA dehydrogenase, middle domain AM352_RS22880 PF09317 Domain of unknown function (DUF1974) AM352_RS22880 PF00441 Acyl-CoA dehydrogenase, C-terminal domain AM352_RS22885 PF00795 Carbon-nitrogen hydrolase AM352_RS22895 PF00929 Exonuclease AM352_RS22900 PF00075 RNase H AM352_RS22905 PF08241 Methyltransferase domain AM352_RS22910 PF00753 Metallo-beta-lactamase superfamily AM352_RS22910 PF16123 Hydroxyacylglutathione hydrolase C-terminus AM352_RS22915 PF01476 LysM domain AM352_RS22915 PF01464 Transglycosylase SLT domain AM352_RS22920 PF08241 Methyltransferase domain AM352_RS22925 PF03372 Endonuclease/Exonuclease/phosphatase family AM352_RS22930 PF03466 LysR substrate binding domain AM352_RS22930 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family AM352_RS22970 PF00005 ABC transporter AM352_RS22970 PF09383 NIL domain AM352_RS22975 PF00528 Binding-protein-dependent transport system inner membrane component AM352_RS22980 PF03180 NLPA lipoprotein AM352_RS22985 PF16358 RcsF lipoprotein AM352_RS22990 PF18389 TrmO C-terminal domain AM352_RS22990 PF01980 tRNA-methyltransferase O AM352_RS22995 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) AM352_RS22995 PF04073 Aminoacyl-tRNA editing domain AM352_RS22995 PF03129 Anticodon binding domain AM352_RS23000 PF17185 NlpE C-terminal OB domain AM352_RS23000 PF04170 NlpE N-terminal domain AM352_RS23005 PF00472 RF-1 domain AM352_RS23010 PF07152 YaeQ protein AM352_RS23015 PF06786 Uncharacterised protein family (UPF0253) AM352_RS23020 PF07073 Modulator of Rho-dependent transcription termination (ROF) AM352_RS23025 PF09179 TilS substrate binding domain AM352_RS23025 PF11734 TilS substrate C-terminal domain AM352_RS23025 PF01171 PP-loop family AM352_RS23030 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily AM352_RS23035 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain AM352_RS23035 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain AM352_RS23035 PF01276 Orn/Lys/Arg decarboxylase, major domain AM352_RS23040 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit AM352_RS23045 PF14579 Helix-hairpin-helix motif AM352_RS23045 PF17657 Bacterial DNA polymerase III alpha subunit finger domain AM352_RS23045 PF07733 Bacterial DNA polymerase III alpha NTPase domain AM352_RS23045 PF01336 OB-fold nucleic acid binding domain AM352_RS23045 PF02811 PHP domain AM352_RS23050 PF01351 Ribonuclease HII AM352_RS23055 PF02684 Lipid-A-disaccharide synthetase AM352_RS23060 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS23060 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 AM352_RS23065 PF07977 FabA-like domain AM352_RS23070 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD AM352_RS23070 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS23075 PF03938 Outer membrane protein (OmpH-like) AM352_RS23080 PF01103 Surface antigen AM352_RS23080 PF07244 Surface antigen variable number repeat AM352_RS23085 PF17820 PDZ domain AM352_RS23085 PF02163 Peptidase family M50 AM352_RS23095 PF01255 Putative undecaprenyl diphosphate synthase AM352_RS23100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase AM352_RS23100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain AM352_RS23100 PF13288 DXP reductoisomerase C-terminal domain AM352_RS23105 PF01765 Ribosome recycling factor AM352_RS23115 PF00696 Amino acid kinase family AM352_RS23120 PF00889 Elongation factor TS AM352_RS23125 PF00318 Ribosomal protein S2 AM352_RS23130 PF00557 Metallopeptidase family M24 AM352_RS23135 PF01909 Nucleotidyltransferase domain AM352_RS23135 PF01966 HD domain AM352_RS23135 PF08335 GlnD PII-uridylyltransferase AM352_RS23135 PF01842 ACT domain AM352_RS23140 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal AM352_RS23140 PF00132 Bacterial transferase hexapeptide (six repeats) AM352_RS23140 PF14602 Hexapeptide repeat of succinyl-transferase AM352_RS23145 PF11944 Protein of unknown function (DUF3461) AM352_RS23150 PF13556 PucR C-terminal helix-turn-helix domain AM352_RS23150 PF17853 GGDEF-like domain AM352_RS23150 PF05651 Putative sugar diacid recognition AM352_RS23155 PF00595 PDZ domain AM352_RS23165 PF01966 HD domain AM352_RS23165 PF13286 Phosphohydrolase-associated domain AM352_RS23170 PF01048 Phosphorylase superfamily AM352_RS23175 PF01497 Periplasmic binding protein AM352_RS23180 PF03458 UPF0126 domain AM352_RS23185 PF01521 Iron-sulphur cluster biosynthesis AM352_RS23190 PF00654 Voltage gated chloride channel AM352_RS23195 PF00202 Aminotransferase class-III AM352_RS23200 PF01032 FecCD transport family AM352_RS23205 PF01497 Periplasmic binding protein AM352_RS23210 PF00005 ABC transporter AM352_RS23215 PF07715 TonB-dependent Receptor Plug Domain AM352_RS23215 PF00593 TonB dependent receptor AM352_RS23220 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal AM352_RS23220 PF14814 Bifunctional transglycosylase second domain AM352_RS23220 PF00905 Penicillin binding protein transpeptidase domain AM352_RS23220 PF00912 Transglycosylase AM352_RS23225 PF00270 DEAD/DEAH box helicase AM352_RS23225 PF04408 Helicase associated domain (HA2) AM352_RS23225 PF00271 Helicase conserved C-terminal domain AM352_RS23225 PF08482 ATP-dependent helicase C-terminal AM352_RS23230 PF02834 LigT like Phosphoesterase AM352_RS23235 PF17746 SfsA N-terminal OB domain AM352_RS23235 PF03749 Sugar fermentation stimulation protein RE domain AM352_RS23240 PF01258 Prokaryotic dksA/traR C4-type zinc finger AM352_RS23245 PF00749 tRNA synthetases class I (E and Q), catalytic domain AM352_RS23250 PF12626 Polymerase A arginine-rich C-terminus AM352_RS23250 PF01743 Poly A polymerase head domain AM352_RS23250 PF12627 Probable RNA and SrmB- binding site of polymerase A AM352_RS23255 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) AM352_RS23260 PF02548 Ketopantoate hydroxymethyltransferase AM352_RS23265 PF02569 Pantoate-beta-alanine ligase AM352_RS23270 PF02261 Aspartate decarboxylase AM352_RS23280 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain AM352_RS23280 PF02753 Pili assembly chaperone PapD, C-terminal domain AM352_RS23285 PF13953 PapC C-terminal domain AM352_RS23285 PF00577 Outer membrane usher protein AM352_RS23285 PF13954 PapC N-terminal domain AM352_RS23310 PF03610 PTS system fructose IIA component AM352_RS23315 PF01061 ABC-2 type transporter AM352_RS23320 PF00005 ABC transporter AM352_RS23325 PF00484 Carbonic anhydrase AM352_RS23330 PF00156 Phosphoribosyl transferase domain AM352_RS23335 PF01011 PQQ enzyme repeat AM352_RS23340 PF07731 Multicopper oxidase AM352_RS23340 PF00394 Multicopper oxidase AM352_RS23340 PF07732 Multicopper oxidase AM352_RS23345 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) AM352_RS23350 PF17284 Spermidine synthase tetramerisation domain AM352_RS23355 PF02675 S-adenosylmethionine decarboxylase AM352_RS23360 PF06062 Uncharacterised protein family (UPF0231) AM352_RS23365 PF00330 Aconitase family (aconitate hydratase) AM352_RS23365 PF06434 Aconitate hydratase 2 N-terminus AM352_RS23365 PF11791 Aconitate B N-terminal domain AM352_RS23375 PF11737 Protein of unknown function (DUF3300) AM352_RS23385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain AM352_RS23385 PF07992 Pyridine nucleotide-disulphide oxidoreductase AM352_RS23390 PF02817 e3 binding domain AM352_RS23390 PF00364 Biotin-requiring enzyme AM352_RS23390 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) AM352_RS23395 PF17831 Pyruvate dehydrogenase E1 component middle domain AM352_RS23395 PF00456 Transketolase, thiamine diphosphate binding domain AM352_RS23400 PF07729 FCD domain AM352_RS23400 PF00392 Bacterial regulatory proteins, gntR family AM352_RS23405 PF00324 Amino acid permease AM352_RS23415 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain AM352_RS23415 PF04616 Glycosyl hydrolases family 43 AM352_RS23420 PF17113 Regulatory signalling modulator protein AmpE AM352_RS23425 PF01510 N-acetylmuramoyl-L-alanine amidase AM352_RS23430 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain AM352_RS23430 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain AM352_RS23435 PF07963 Prokaryotic N-terminal methylation motif AM352_RS23440 PF00437 Type II/IV secretion system protein AM352_RS23440 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain AM352_RS23445 PF00482 Type II secretion system (T2SS), protein F AM352_RS23450 PF00478 IMP dehydrogenase / GMP reductase domain AM352_RS23455 PF01121 Dephospho-CoA kinase AM352_RS23460 PF07072 Cell division protein AM352_RS23465 PF03884 DNA gyrase inhibitor YacG AM352_RS23470 PF00293 NUDIX domain AM352_RS23475 PF02810 SEC-C motif AM352_RS23475 PF07517 SecA DEAD-like domain AM352_RS23475 PF01043 SecA preprotein cross-linking domain AM352_RS23475 PF07516 SecA Wing and Scaffold domain AM352_RS23480 PF06558 Secretion monitor precursor protein (SecM) AM352_RS23485 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase AM352_RS23490 PF00091 Tubulin/FtsZ family, GTPase domain AM352_RS23490 PF12327 FtsZ family, C-terminal domain AM352_RS23495 PF02491 SHS2 domain inserted in FTSA AM352_RS23500 PF03799 Cell division protein FtsQ AM352_RS23500 PF08478 POTRA domain, FtsQ-type AM352_RS23505 PF07478 D-ala D-ala ligase C-terminus AM352_RS23505 PF01820 D-ala D-ala ligase N-terminus AM352_RS23510 PF01225 Mur ligase family, catalytic domain AM352_RS23510 PF08245 Mur ligase middle domain AM352_RS23510 PF02875 Mur ligase family, glutamate ligase domain AM352_RS23515 PF04101 Glycosyltransferase family 28 C-terminal domain AM352_RS23515 PF03033 Glycosyltransferase family 28 N-terminal domain AM352_RS23520 PF01098 Cell cycle protein AM352_RS23525 PF02875 Mur ligase family, glutamate ligase domain AM352_RS23525 PF08245 Mur ligase middle domain AM352_RS23530 PF00953 Glycosyl transferase family 4 AM352_RS23530 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 AM352_RS23535 PF02875 Mur ligase family, glutamate ligase domain AM352_RS23535 PF08245 Mur ligase middle domain AM352_RS23535 PF01225 Mur ligase family, catalytic domain AM352_RS23555 PF00717 Peptidase S24-like AM352_RS23560 PF02586 SOS response associated peptidase (SRAP) AM352_RS23565 PF01555 DNA methylase AM352_RS23575 PF07128 Protein of unknown function (DUF1380) AM352_RS23600 PF06440 DNA polymerase III, theta subunit AM352_RS23615 PF06006 Bacterial protein of unknown function (DUF905) AM352_RS23620 PF02195 ParB-like nuclease domain AM352_RS23625 PF06290 Plasmid SOS inhibition protein (PsiB) AM352_RS23630 PF06952 PsiA protein AM352_RS23645 PF13817 IS66 C-terminal element AM352_RS23645 PF13005 zinc-finger binding domain of transposase IS66 AM352_RS23645 PF03050 Transposase IS66 family AM352_RS23645 PF13007 Transposase C of IS166 homeodomain AM352_RS23650 PF05717 IS66 Orf2 like protein AM352_RS23685 PF03230 Antirestriction protein AM352_RS23690 PF01464 Transglycosylase SLT domain AM352_RS23695 PF05261 TraM protein, DNA-binding AM352_RS23700 PF00989 PAS fold AM352_RS23705 PF05509 TraY domain AM352_RS23710 PF05513 TraA AM352_RS23715 PF07178 TraL protein AM352_RS23720 PF05309 TraE protein AM352_RS23725 PF06586 TraK protein AM352_RS23730 PF03743 Bacterial conjugation TrbI-like protein AM352_RS23735 PF09676 Type IV conjugative transfer system lipoprotein (TraV) AM352_RS23760 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer AM352_RS23765 PF09677 Type-F conjugative transfer system protein (TrbI_Ftype) AM352_RS23770 PF12477 Sex factor F TraW protein N terminal AM352_RS23775 PF06834 TraU protein AM352_RS23780 PF09673 Type-F conjugative transfer system pilin assembly protein AM352_RS23785 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM352_RS23795 PF13728 F plasmid transfer operon protein AM352_RS23800 PF09679 Type-F conjugative transfer system pilin chaperone (TraQ) AM352_RS23805 PF13728 F plasmid transfer operon protein AM352_RS23815 PF06122 Conjugative relaxosome accessory transposon protein AM352_RS23820 PF07916 TraG-like protein, N-terminal region AM352_RS23835 PF13358 DDE superfamily endonuclease AM352_RS23835 PF13592 Winged helix-turn helix AM352_RS23840 PF12615 F sex factor protein N terminal AM352_RS23840 PF10412 Type IV secretion-system coupling protein DNA-binding domain AM352_RS23845 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM352_RS23845 PF18340 DNA relaxase TraI 2B/2B-like domain AM352_RS23845 PF08751 TrwC relaxase AM352_RS23845 PF07057 DNA helicase TraI AM352_RS23850 PF05857 TraX protein AM352_RS23860 PF06965 Na+/H+ antiporter 1 AM352_RS23860 PF13462 Thioredoxin AM352_RS23870 PF10723 Replication regulatory protein RepB AM352_RS23885 PF02387 IncFII RepA protein family AM352_RS23900 PF01548 Transposase AM352_RS23900 PF02371 Transposase IS116/IS110/IS902 family AM352_RS23915 PF00589 Phage integrase family AM352_RS23920 PF01051 Initiator Replication protein AM352_RS23940 PF01609 Transposase DDE domain AM352_RS23940 PF05598 Transposase domain (DUF772) AM352_RS23950 PF01527 Transposase AM352_RS23955 PF13936 Helix-turn-helix domain AM352_RS23955 PF00665 Integrase core domain AM352_RS23965 PF05717 IS66 Orf2 like protein AM352_RS23970 PF13007 Transposase C of IS166 homeodomain AM352_RS23970 PF13817 IS66 C-terminal element AM352_RS23970 PF03050 Transposase IS66 family AM352_RS23970 PF13005 zinc-finger binding domain of transposase IS66 AM352_RS23985 PF13614 AAA domain AM352_RS23990 PF18090 Centromere-binding protein HTH domain AM352_RS23990 PF02195 ParB-like nuclease domain AM352_RS24005 PF00005 ABC transporter AM352_RS24010 PF00145 C-5 cytosine-specific DNA methylase AM352_RS24010 PF18284 DNA methylase N-terminal domain AM352_RS24015 PF09019 EcoRII C terminal AM352_RS24015 PF09217 Restriction endonuclease EcoRII, N-terminal AM352_RS24030 PF03743 Bacterial conjugation TrbI-like protein AM352_RS24040 PF11130 F pilus assembly Type-IV secretion system for plasmid transfer AM352_RS24050 PF12477 Sex factor F TraW protein N terminal AM352_RS24055 PF06834 TraU protein AM352_RS24060 PF09673 Type-F conjugative transfer system pilin assembly protein AM352_RS24070 PF06986 Type-1V conjugative transfer system mating pair stabilisation AM352_RS24075 PF13728 F plasmid transfer operon protein AM352_RS24080 PF13728 F plasmid transfer operon protein AM352_RS24090 PF06122 Conjugative relaxosome accessory transposon protein AM352_RS24095 PF07916 TraG-like protein, N-terminal region AM352_RS24110 PF01464 Transglycosylase SLT domain AM352_RS24115 PF12615 F sex factor protein N terminal AM352_RS24115 PF10412 Type IV secretion-system coupling protein DNA-binding domain AM352_RS24120 PF08751 TrwC relaxase AM352_RS24120 PF18272 single-stranded DNA binding TraI N-terminal subdomain AM352_RS24120 PF18340 DNA relaxase TraI 2B/2B-like domain AM352_RS24120 PF07057 DNA helicase TraI AM352_RS24130 PF10723 Replication regulatory protein RepB AM352_RS24140 PF02387 IncFII RepA protein family AM352_RS24150 PF11504 Colicin Ia AM352_RS24150 PF01024 Colicin pore forming domain AM352_RS24175 PF07015 VirC1 protein AM352_RS24190 PF05973 Phage derived protein Gp49-like (DUF891) AM352_RS24260 PF05513 TraA AM352_RS24265 PF07178 TraL protein