locus-tag	class	description
AM352_RS00010	COG0768	penicillin binding
AM352_RS00030	COG1609	Transcriptional regulator
AM352_RS00040	COG0028	Belongs to the TPP enzyme family
AM352_RS00075	COG2814	Major facilitator Superfamily
AM352_RS00095	COG1178	ABC-type Fe3 transport system permease component
AM352_RS00105	COG0586	Pfam SNARE associated Golgi protein
AM352_RS00125	COG0235	Class ii aldolase
AM352_RS00130	COG0417	DNA replication proofreading
AM352_RS00140	COG0564	pseudouridine synthase activity
AM352_RS00145	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
AM352_RS00160	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM352_RS00215	COG2271	Major facilitator Superfamily
AM352_RS00225	COG0644	oxidoreductase
AM352_RS00315	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM352_RS00320	COG3493	citrate carrier protein
AM352_RS00345	COG1047	Peptidyl-prolyl cis-trans
AM352_RS00360	COG0196	riboflavin kinase activity
AM352_RS00375	COG0583	DNA-binding transcription factor activity
AM352_RS00395	COG1584	GPR1 FUN34 yaaH family protein
AM352_RS00405	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM352_RS00415	COG1115	amino acid carrier protein
AM352_RS00430	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
AM352_RS00440	COG0460	homoserine dehydrogenase
AM352_RS00440	COG0527	aspartate kinase activity
AM352_RS00450	COG0565	Catalyzes the formation of 2'O-methylated cytidine (Cm32) or 2'O-methylated uridine (Um32) at position 32 in tRNA
AM352_RS00460	COG0745	RESPONSE REGULATOR receiver
AM352_RS00465	COG3045	CreA protein
AM352_RS00470	COG2207	Transcriptional regulator
AM352_RS00470	COG3708	Transcriptional regulator
AM352_RS00490	COG0741	lytic transglycosylase activity
AM352_RS00500	COG0488	(ABC) transporter
AM352_RS00515	COG0560	Phosphoserine phosphatase
AM352_RS00520	COG3726	membrane protein affecting hemolysin expression
AM352_RS00535	COG3121	Chaperone
AM352_RS00540	COG3188	usher protein
AM352_RS00560	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
AM352_RS00570	COG1328	CTP reductase activity
AM352_RS00575	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM352_RS00580	COG0084	hydrolase, TatD family'
AM352_RS00585	COG4667	esterase of the alpha-beta hydrolase superfamily
AM352_RS00595	COG2823	Periplasmic or secreted lipoprotein
AM352_RS00605	COG1011	Hydrolase
AM352_RS00610	COG0456	acetyltransferase
AM352_RS00615	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
AM352_RS00645	COG3706	GGDEF domain
AM352_RS00650	COG4114	ferric iron reductase
AM352_RS00655	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM352_RS00660	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM352_RS00665	COG2197	response regulator
AM352_RS00670	COG2197	response regulator
AM352_RS00675	COG2966	Psort location CytoplasmicMembrane, score
AM352_RS00690	COG1484	DNA-dependent DNA replication
AM352_RS00710	COG0840	transmembrane signaling receptor activity
AM352_RS00720	COG1966	Carbon starvation protein
AM352_RS00725	COG2879	small protein
AM352_RS00730	COG0523	cobalamin synthesis protein
AM352_RS00740	COG1566	PFAM secretion protein HlyD family protein
AM352_RS00750	COG5457	Domain of unknown function (DUF1127)
AM352_RS00755	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM352_RS00760	COG5464	transposase or invertase
AM352_RS00770	COG2733	membrane
AM352_RS00775	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
AM352_RS00780	COG1924	4 iron, 4 sulfur cluster binding
AM352_RS00790	COG0477	Major facilitator Superfamily
AM352_RS00795	COG0180	Tryptophanyl-tRNA synthetase
AM352_RS00835	COG2003	Belongs to the UPF0758 family
AM352_RS00860	COG3596	GTP binding
AM352_RS00875	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AM352_RS00885	COG1201	RNA secondary structure unwinding
AM352_RS00935	COG0610	Subunit R is required for both nuclease and ATPase activities, but not for modification
AM352_RS00950	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
AM352_RS00960	COG0582	viral genome integration into host DNA
AM352_RS00970	COG1064	alcohol dehydrogenase
AM352_RS00975	COG0433	COG0433 Predicted ATPase
AM352_RS00980	COG0795	lipopolysaccharide-transporting ATPase activity
AM352_RS00985	COG0795	lipopolysaccharide-transporting ATPase activity
AM352_RS01000	COG2927	DNA polymerase III (CHI subunit)
AM352_RS01005	COG0525	valine-tRNA ligase activity
AM352_RS01035	COG2731	YhcH YjgK YiaL family protein
AM352_RS01045	COG2235	arginine
AM352_RS01055	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
AM352_RS01060	COG1288	antiporter activity
AM352_RS01065	COG1438	arginine binding
AM352_RS01120	COG1263	PTS System
AM352_RS01120	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS01125	COG0366	Alpha amylase catalytic
AM352_RS01135	COG1737	Transcriptional regulator
AM352_RS01145	COG0383	alpha-mannosidase activity
AM352_RS01150	COG0366	Alpha amylase catalytic
AM352_RS01155	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS01155	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS01155	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS01165	COG0602	queuosine metabolic process
AM352_RS01170	COG3711	transcriptional antiterminator
AM352_RS01170	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS01185	COG3964	amidohydrolase
AM352_RS01220	COG0312	modulator of DNA gyrase
AM352_RS01230	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
AM352_RS01240	COG0840	transmembrane signaling receptor activity
AM352_RS01245	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS01250	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS01255	COG1129	ABC transporter
AM352_RS01260	COG1879	ABC-type sugar transport system periplasmic component
AM352_RS01270	COG2105	PFAM AIG2 family protein
AM352_RS01275	COG2911	Protein conserved in bacteria
AM352_RS01280	COG0729	surface antigen
AM352_RS01290	COG1253	flavin adenine dinucleotide binding
AM352_RS01300	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
AM352_RS01305	COG1218	3'(2'),5'-bisphosphate nucleotidase
AM352_RS01315	COG1733	regulation of RNA biosynthetic process
AM352_RS01320	COG0702	epimerase
AM352_RS01330	COG0697	spore germination
AM352_RS01345	COG1113	amino acid transport
AM352_RS01350	COG0545	Peptidyl-prolyl cis-trans isomerase
AM352_RS01355	COG3061	Opacity-associated protein A
AM352_RS01370	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
AM352_RS01405	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS01410	COG3414	Phosphotransferase system galactitol-specific IIB component
AM352_RS01430	COG1073	alpha beta
AM352_RS01435	COG3650	response to hydrogen peroxide
AM352_RS01445	COG1960	acyl-CoA dehydrogenase activity
AM352_RS01450	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM352_RS01475	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
AM352_RS01480	COG0330	HflC and HflK could
AM352_RS01485	COG0330	HflC and HflK could
AM352_RS01490	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
AM352_RS01510	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM352_RS01515	COG0802	atpase or kinase
AM352_RS01520	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
AM352_RS01520	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
AM352_RS01525	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
AM352_RS01565	COG1511	domain protein
AM352_RS01565	COG3264	Mechanosensitive ion channel
AM352_RS01580	COG1053	succinate dehydrogenase
AM352_RS01585	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
AM352_RS01635	COG1509	lysine 2,3-aminomutase activity
AM352_RS01660	COG0531	amino acid
AM352_RS01665	COG3030	protein affecting phage T7 exclusion by the F plasmid
AM352_RS01675	COG1027	Aspartate ammonia-lyase
AM352_RS01680	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM352_RS01695	COG1309	transcriptional regulator
AM352_RS01710	COG0582	viral genome integration into host DNA
AM352_RS01715	COG4974	Belongs to the 'phage' integrase family
AM352_RS01725	COG3539	Fimbrial protein
AM352_RS01730	COG3121	Chaperone
AM352_RS01735	COG3188	usher protein
AM352_RS01740	COG3539	Fimbrial protein
AM352_RS01745	COG3539	Fimbrial protein
AM352_RS01750	COG3539	Fimbrial protein
AM352_RS01760	COG0840	transmembrane signaling receptor activity
AM352_RS01765	COG0281	malic enzyme
AM352_RS01770	COG3069	C4-dicarboxylate transmembrane transporter activity
AM352_RS01780	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM352_RS01805	COG1609	Transcriptional regulator
AM352_RS01815	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS01820	COG1593	TRAP-type C4-dicarboxylate transport system, large permease component
AM352_RS01830	COG0246	Mannitol dehydrogenase
AM352_RS01840	COG1904	glucuronate isomerase
AM352_RS01845	COG1312	Catalyzes the dehydration of D-mannonate
AM352_RS01860	COG4771	TonB-dependent receptor
AM352_RS01865	COG3720	iron ion transport
AM352_RS01870	COG4558	Periplasmic binding protein
AM352_RS01875	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS01885	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM352_RS01890	COG3290	protein histidine kinase activity
AM352_RS01895	COG4565	transcriptional regulatory protein
AM352_RS01900	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
AM352_RS01905	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS01905	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS01950	COG2824	Alkylphosphonate utilization operon protein PhnA
AM352_RS01955	COG2764	glyoxalase bleomycin resistance protein dioxygenase
AM352_RS01960	COG3638	Part of the ABC transporter complex PhnCDE involved in phosphonates import. Responsible for energy coupling to the transport system
AM352_RS01965	COG3221	ABC-type phosphate phosphonate transport system periplasmic component
AM352_RS01970	COG3639	organic phosphonate transmembrane transporter activity
AM352_RS01975	COG2188	Transcriptional regulator
AM352_RS01980	COG3624	Phosphonate C-P lyase system protein PhnG
AM352_RS01985	COG3625	alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity
AM352_RS01990	COG3626	phosphonate metabolism
AM352_RS01995	COG3627	carbon phosphorus lyase activity
AM352_RS02000	COG4107	phosphonate C-P lyase system protein PhnK
AM352_RS02005	COG4778	phosphonate C-P lyase system protein PhnL
AM352_RS02010	COG3454	Phosphonate metabolism
AM352_RS02015	COG3709	Catalyzes the phosphorylation of ribose 1,5-bisphosphate to 5-phospho-D-ribosyl alpha-1-diphosphate (PRPP)
AM352_RS02020	COG0456	acetyltransferase
AM352_RS02025	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
AM352_RS02035	COG0698	ribose 5-phosphate isomerase
AM352_RS02040	COG1737	Transcriptional regulator
AM352_RS02045	COG1879	ABC-type sugar transport system periplasmic component
AM352_RS02050	COG1129	ABC transporter
AM352_RS02055	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS02060	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM352_RS02065	COG1940	carbohydrate kinase activity
AM352_RS02070	COG4191	Histidine kinase
AM352_RS02070	COG0784	Response regulator, receiver
AM352_RS02080	COG1129	ABC transporter
AM352_RS02085	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS02120	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
AM352_RS02125	COG1301	dicarboxylic acid transport
AM352_RS02135	COG1138	Cytochrome C-type biogenesis protein
AM352_RS02140	COG3301	Polysulphide reductase, NrfD
AM352_RS02145	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS02150	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
AM352_RS02165	COG3162	membrane
AM352_RS02175	COG1346	cytolysis
AM352_RS02180	COG1380	Effector of murein hydrolase LrgA
AM352_RS02185	COG0583	DNA-binding transcription factor activity
AM352_RS02190	COG1943	Transposase
AM352_RS02195	COG0025	NhaP-type Na H and K H
AM352_RS02200	COG2252	PERMEase
AM352_RS02225	COG0789	Transcriptional regulator
AM352_RS02235	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM352_RS02250	COG1595	DNA-templated transcription, initiation
AM352_RS02255	COG3712	iron ion homeostasis
AM352_RS02260	COG4772	TonB-dependent receptor
AM352_RS02265	COG4594	ABC-type Fe3 -citrate transport system, periplasmic component
AM352_RS02270	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS02275	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS02280	COG1120	ATPase activity
AM352_RS02285	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
AM352_RS02295	COG0589	response to stress
AM352_RS02300	COG0629	single-stranded DNA binding
AM352_RS02315	COG2315	Protein conserved in bacteria
AM352_RS02320	COG3700	Belongs to the class B bacterial acid phosphatase family
AM352_RS02325	COG1448	Aminotransferase
AM352_RS02330	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM352_RS02350	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM352_RS02365	COG3157	Type VI secretion system effector, Hcp
AM352_RS02370	COG0735	belongs to the Fur family
AM352_RS02375	COG3237	CsbD-like
AM352_RS02380	COG0534	Mate efflux family protein
AM352_RS02390	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
AM352_RS02440	COG3833	ABC-type maltose transport systems, permease component
AM352_RS02445	COG3223	Belongs to the PsiE family
AM352_RS02450	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM352_RS02475	COG0527	aspartate kinase activity
AM352_RS02490	COG1187	pseudouridine synthase activity
AM352_RS02505	COG1410	methionine synthase
AM352_RS02505	COG0646	methionine synthase
AM352_RS02525	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
AM352_RS02535	COG0456	acetyltransferase
AM352_RS02565	COG0151	Belongs to the GarS family
AM352_RS02600	COG3160	Binds RpoD and negatively regulates RpoD-mediated transcription activation by preventing the interaction between the primary sigma factor RpoD with the catalytic core of the RNA polymerase and with promoter DNA. May be involved in replacement of the RNA polymerase sigma subunit from RpoD to RpoS during the transition from exponential growth to the stationary phase
AM352_RS02615	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
AM352_RS02620	COG2104	thiamine diphosphate biosynthetic process
AM352_RS02645	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM352_RS02685	COG0250	Participates in transcription elongation, termination and antitermination
AM352_RS02690	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM352_RS02735	COG0812	UDP-N-acetylmuramate dehydrogenase activity
AM352_RS02800	COG0583	DNA-binding transcription factor activity
AM352_RS02835	COG2207	Transcriptional regulator
AM352_RS02840	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS02845	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM352_RS02850	COG1882	Formate acetyltransferase
AM352_RS02855	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS02860	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS02865	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM352_RS02865	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS02865	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS02875	COG0371	Dehydrogenase
AM352_RS02890	COG0583	DNA-binding transcription factor activity
AM352_RS02900	COG0460	homoserine dehydrogenase
AM352_RS02900	COG0527	aspartate kinase activity
AM352_RS02905	COG0626	cystathionine gamma-synthase activity
AM352_RS02920	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
AM352_RS02925	COG1609	Transcriptional regulator
AM352_RS02930	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM352_RS02945	COG1575	Belongs to the MenA family. Type 1 subfamily
AM352_RS02955	COG3074	FtsZ-dependent cytokinesis
AM352_RS02960	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
AM352_RS02970	COG1494	fructose-1,6-bisphosphatase
AM352_RS02980	COG3152	Membrane
AM352_RS03005	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
AM352_RS03020	COG3678	ATP-independent chaperone mediated protein folding
AM352_RS03025	COG0745	RESPONSE REGULATOR receiver
AM352_RS03030	COG2205	protein histidine kinase activity
AM352_RS03035	COG2258	MOSC domain
AM352_RS03040	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AM352_RS03085	COG1454	alcohol dehydrogenase
AM352_RS03100	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM352_RS03125	COG3188	usher protein
AM352_RS03130	COG3121	Chaperone
AM352_RS03140	COG3383	formate dehydrogenase (NAD+) activity
AM352_RS03140	COG0243	molybdopterin cofactor binding
AM352_RS03145	COG0243	molybdopterin cofactor binding
AM352_RS03145	COG3383	formate dehydrogenase (NAD+) activity
AM352_RS03150	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS03155	COG2864	formate dehydrogenase
AM352_RS03170	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM352_RS03175	COG0456	acetyltransferase
AM352_RS03190	COG1011	Hydrolase
AM352_RS03200	COG1349	DNA-binding transcription factor activity
AM352_RS03205	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS03215	COG3684	Belongs to the aldolase LacD family
AM352_RS03225	COG1501	Belongs to the glycosyl hydrolase 31 family
AM352_RS03255	COG0174	glutamine synthetase
AM352_RS03260	COG3852	Histidine kinase
AM352_RS03275	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM352_RS03305	COG0204	Acyl-transferase
AM352_RS03320	COG3084	Protein conserved in bacteria
AM352_RS03325	COG0746	molybdenum cofactor guanylyltransferase activity
AM352_RS03330	COG1763	Mo-molybdopterin cofactor biosynthetic process
AM352_RS03370	COG1739	Uncharacterized protein family UPF0029
AM352_RS03410	COG0805	protein transport
AM352_RS03430	COG3165	ubiquinone biosynthetic process from chorismate
AM352_RS03440	COG1322	Protein conserved in bacteria
AM352_RS03445	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
AM352_RS03460	COG0583	DNA-binding transcription factor activity
AM352_RS03465	COG0697	spore germination
AM352_RS03470	COG0561	phosphatase activity
AM352_RS03480	COG1280	lysine exporter protein (LysE YggA)
AM352_RS03485	COG1280	lysine exporter protein (LysE YggA)
AM352_RS03520	COG1011	Hydrolase
AM352_RS03530	COG3159	Protein conserved in bacteria
AM352_RS03565	COG2959	enzyme of heme biosynthesis
AM352_RS03570	COG3071	HemY protein
AM352_RS03615	COG2244	polysaccharide biosynthetic process
AM352_RS03620	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
AM352_RS03625	COG0456	acetyltransferase
AM352_RS03630	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
AM352_RS03635	COG1088	dTDP-glucose 4,6-dehydratase activity
AM352_RS03640	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
AM352_RS03665	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
AM352_RS03670	COG3118	belongs to the thioredoxin family
AM352_RS03705	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM352_RS03715	COG0583	DNA-binding transcription factor activity
AM352_RS03730	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM352_RS03735	COG3978	acetolactate synthase activity
AM352_RS03750	COG0606	chelatase, subunit chli
AM352_RS03755	COG3085	chromosome segregation
AM352_RS03795	COG2186	Transcriptional regulator
AM352_RS03800	COG0477	Major facilitator Superfamily
AM352_RS03805	COG1609	Transcriptional regulator
AM352_RS03810	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS03815	COG1879	ABC-type sugar transport system periplasmic component
AM352_RS03820	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS03860	COG1522	sequence-specific DNA binding
AM352_RS03865	COG0716	FMN binding
AM352_RS03880	COG3312	ion transport
AM352_RS03935	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
AM352_RS03940	COG0573	inorganic phosphate transmembrane transporter activity
AM352_RS03945	COG0581	inorganic phosphate transmembrane transporter activity
AM352_RS03955	COG0704	Plays a role in the regulation of phosphate uptake
AM352_RS03960	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM352_RS03965	COG2252	PERMEase
AM352_RS03970	COG0431	NADPH-dependent FMN reductase
AM352_RS03975	COG2091	lysine biosynthetic process via aminoadipic acid
AM352_RS04025	COG0592	DNA-directed DNA polymerase activity
AM352_RS04040	COG0561	phosphatase activity
AM352_RS04045	COG2186	Transcriptional regulator
AM352_RS04050	COG3734	2-keto-3-deoxy-galactonokinase
AM352_RS04055	COG0800	Aldolase
AM352_RS04060	COG4948	Mandelate Racemase Muconate Lactonizing
AM352_RS04065	COG2271	Major facilitator Superfamily
AM352_RS04070	COG0823	Involved in the tonB-independent uptake of proteins
AM352_RS04075	COG5645	(Lipo)protein
AM352_RS04095	COG2188	Transcriptional regulator
AM352_RS04110	COG2207	Transcriptional regulator
AM352_RS04115	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
AM352_RS04120	COG3119	arylsulfatase activity
AM352_RS04125	COG2149	membrane
AM352_RS04135	COG0641	radical SAM
AM352_RS04145	COG2610	gluconate transmembrane transporter activity
AM352_RS04150	COG0583	DNA-binding transcription factor activity
AM352_RS04160	COG2814	Major facilitator Superfamily
AM352_RS04180	COG0028	Belongs to the TPP enzyme family
AM352_RS04185	COG0440	acetolactate synthase activity
AM352_RS04195	COG2197	response regulator
AM352_RS04205	COG2271	Major facilitator Superfamily
AM352_RS04215	COG0800	Aldolase
AM352_RS04220	COG3734	2-keto-3-deoxy-galactonokinase
AM352_RS04225	COG2271	Major facilitator Superfamily
AM352_RS04230	COG2721	sulfolactate sulfo-lyase activity
AM352_RS04235	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
AM352_RS04240	COG1414	Transcriptional regulator
AM352_RS04280	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS04280	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS04285	COG3715	PTS system
AM352_RS04290	COG3716	PTS system mannose fructose sorbose family IID component
AM352_RS04305	COG1464	Belongs to the NlpA lipoprotein family
AM352_RS04315	COG3121	Chaperone
AM352_RS04325	COG3539	Fimbrial protein
AM352_RS04330	COG3121	Chaperone
AM352_RS04340	COG0697	spore germination
AM352_RS04345	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
AM352_RS04350	COG0604	alcohol dehydrogenase
AM352_RS04355	COG0583	DNA-binding transcription factor activity
AM352_RS04370	COG2003	Belongs to the UPF0758 family
AM352_RS04410	COG0514	ATP-dependent DNA helicase (RecQ)
AM352_RS04435	COG0582	viral genome integration into host DNA
AM352_RS04445	COG2982	Protein involved in outer membrane biogenesis
AM352_RS04450	COG2233	PERMEase
AM352_RS04455	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
AM352_RS04460	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM352_RS04465	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM352_RS04485	COG2860	membrane
AM352_RS04505	COG1396	sequence-specific DNA binding
AM352_RS04540	COG1561	YicC-like family, N-terminal region
AM352_RS04570	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
AM352_RS04600	COG1519	Transferase
AM352_RS04605	COG0438	transferase activity, transferring glycosyl groups
AM352_RS04610	COG0515	serine threonine protein kinase
AM352_RS04615	COG1442	glycosyl transferase family 8
AM352_RS04620	COG1442	glycosyl transferase family 8
AM352_RS04630	COG0859	PFAM glycosyl transferase family 9
AM352_RS04635	COG1215	transferase activity, transferring glycosyl groups
AM352_RS04640	COG3307	-O-antigen
AM352_RS04645	COG0859	PFAM glycosyl transferase family 9
AM352_RS04650	COG0859	PFAM glycosyl transferase family 9
AM352_RS04660	COG0156	8-amino-7-oxononanoate synthase activity
AM352_RS04675	COG1216	Glycosyl transferase, family 2
AM352_RS04680	COG2861	carbohydrate metabolic process
AM352_RS04685	COG4942	peptidase
AM352_RS04695	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM352_RS04700	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
AM352_RS04715	COG1045	serine acetyltransferase
AM352_RS04720	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
AM352_RS04730	COG2186	Transcriptional regulator
AM352_RS04750	COG3722	fumarate hydratase activity
AM352_RS04765	COG2213	PTS system mannitol-specific
AM352_RS04765	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS04775	COG1566	PFAM secretion protein HlyD family protein
AM352_RS04780	COG0625	glutathione transferase activity
AM352_RS04790	COG3276	selenocysteine insertion sequence binding
AM352_RS04795	COG1454	alcohol dehydrogenase
AM352_RS04800	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS04810	COG0235	Class ii aldolase
AM352_RS04815	COG3623	hexulose-6-phosphate isomerase
AM352_RS04820	COG0269	3-dehydro-L-gulonate-6-phosphate decarboxylase activity
AM352_RS04825	COG1070	Carbohydrate kinase
AM352_RS04840	COG2731	YhcH YjgK YiaL family protein
AM352_RS04850	COG1414	Transcriptional regulator
AM352_RS04855	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS04860	COG3977	Valine--pyruvate aminotransferase
AM352_RS04865	COG0366	Alpha amylase catalytic
AM352_RS04875	COG2992	FlgJ-related protein
AM352_RS04880	COG2207	Transcriptional regulator
AM352_RS04880	COG1609	Transcriptional regulator
AM352_RS04885	COG4214	carbohydrate transport
AM352_RS04895	COG4213	ABC transporter substrate-binding protein
AM352_RS04905	COG1070	Carbohydrate kinase
AM352_RS04915	COG3274	enterobacterial common antigen metabolic process
AM352_RS04935	COG1278	Cold shock
AM352_RS04940	COG2944	sequence-specific DNA binding
AM352_RS04960	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS04970	COG1609	Transcriptional regulator
AM352_RS04975	COG2885	chlorophyll binding
AM352_RS04980	COG0243	molybdopterin cofactor binding
AM352_RS04985	COG0456	acetyltransferase
AM352_RS04990	COG2818	Glycosylase
AM352_RS04995	COG5571	outer membrane autotransporter
AM352_RS05000	COG2223	nitrite transmembrane transporter activity
AM352_RS05025	COG0747	negative chemotaxis
AM352_RS05030	COG0601	transmembrane transport
AM352_RS05035	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM352_RS05040	COG0444	Belongs to the ABC transporter superfamily
AM352_RS05045	COG4608	Belongs to the ABC transporter superfamily
AM352_RS05050	COG2204	response regulator
AM352_RS05055	COG0814	amino acid
AM352_RS05095	COG1215	transferase activity, transferring glycosyl groups
AM352_RS05100	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
AM352_RS05105	COG0457	Tetratricopeptide repeat
AM352_RS05105	COG3118	belongs to the thioredoxin family
AM352_RS05110	COG2200	EAL domain
AM352_RS05110	COG2199	diguanylate cyclase activity
AM352_RS05145	COG2200	EAL domain
AM352_RS05150	COG2982	Protein involved in outer membrane biogenesis
AM352_RS05155	COG0477	Major facilitator Superfamily
AM352_RS05160	COG1295	ribonuclease BN
AM352_RS05165	COG0583	DNA-binding transcription factor activity
AM352_RS05170	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS05185	COG1858	cytochrome C peroxidase
AM352_RS05190	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM352_RS05195	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
AM352_RS05200	COG0339	signal peptide processing
AM352_RS05215	COG1959	2 iron, 2 sulfur cluster binding
AM352_RS05225	COG4737	Cytotoxic translational repressor of toxin-antitoxin stability system
AM352_RS05235	COG0589	response to stress
AM352_RS05250	COG0306	phosphate transporter
AM352_RS05255	COG2081	HI0933 family
AM352_RS05260	COG2239	Acts as a magnesium transporter
AM352_RS05265	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS05270	COG0842	Transport permease protein
AM352_RS05270	COG1129	ABC transporter
AM352_RS05275	COG0842	Transport permease protein
AM352_RS05290	COG0444	Belongs to the ABC transporter superfamily
AM352_RS05295	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM352_RS05300	COG0601	transmembrane transport
AM352_RS05305	COG0747	negative chemotaxis
AM352_RS05315	COG2091	lysine biosynthetic process via aminoadipic acid
AM352_RS05320	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM352_RS05325	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS05335	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM352_RS05360	COG1216	Glycosyl transferase, family 2
AM352_RS05380	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
AM352_RS05390	COG0204	Acyl-transferase
AM352_RS05410	COG0628	permease
AM352_RS05415	COG0477	Major facilitator Superfamily
AM352_RS05425	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
AM352_RS05435	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
AM352_RS05445	COG3714	YhhN family
AM352_RS05455	COG3776	membrane
AM352_RS05460	COG0742	ribosomal rna small subunit methyltransferase
AM352_RS05465	COG0552	protein localization to endoplasmic reticulum
AM352_RS05470	COG2884	Cell division ATP-binding protein ftsE
AM352_RS05475	COG2177	Part of the ABC transporter FtsEX involved in
AM352_RS05485	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM352_RS05490	COG0683	leucine binding
AM352_RS05500	COG0683	leucine binding
AM352_RS05510	COG4177	L-phenylalanine transmembrane transporter activity
AM352_RS05515	COG0411	ABC transporter
AM352_RS05520	COG0410	ABC transporter
AM352_RS05545	COG0584	glycerophosphoryl diester phosphodiesterase
AM352_RS05555	COG0405	Gamma-glutamyltransferase
AM352_RS05575	COG3157	Type VI secretion system effector, Hcp
AM352_RS05580	COG1247	-acetyltransferase
AM352_RS05585	COG0673	inositol 2-dehydrogenase activity
AM352_RS05590	COG1741	Belongs to the pirin family
AM352_RS05595	COG1609	Transcriptional regulator
AM352_RS05600	COG3265	gluconokinase activity
AM352_RS05605	COG2610	gluconate transmembrane transporter activity
AM352_RS05615	COG2095	MarC family integral membrane protein
AM352_RS05620	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM352_RS05645	COG0058	SHG alpha-glucan phosphorylase activity
AM352_RS05650	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM352_RS05665	COG1349	DNA-binding transcription factor activity
AM352_RS05675	COG0058	SHG alpha-glucan phosphorylase activity
AM352_RS05680	COG1640	4-alpha-glucanotransferase
AM352_RS05685	COG2610	gluconate transmembrane transporter activity
AM352_RS05695	COG1040	competence protein
AM352_RS05715	COG1918	ferrous iron import across plasma membrane
AM352_RS05725	COG2183	response to ionizing radiation
AM352_RS05730	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM352_RS05765	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
AM352_RS05770	COG1011	Hydrolase
AM352_RS05780	COG0494	nUDIX hydrolase
AM352_RS05785	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
AM352_RS05790	COG4972	Pilus assembly protein
AM352_RS05795	COG3166	PFAM Fimbrial assembly family protein
AM352_RS05805	COG4796	Type ii and iii secretion system protein
AM352_RS05825	COG3266	domain, Protein
AM352_RS05830	COG0338	D12 class N6 adenine-specific DNA methyltransferase
AM352_RS05835	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM352_RS05850	COG2188	Transcriptional regulator
AM352_RS05860	COG3457	Alanine racemase
AM352_RS05865	COG1015	Phosphotransfer between the C1 and C5 carbon atoms of pentose
AM352_RS05870	COG1735	metal-dependent hydrolase with the TIM-barrel fold
AM352_RS05910	COG2146	nitrite reductase [NAD(P)H] activity
AM352_RS05915	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM352_RS05945	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
AM352_RS05950	COG1289	transmembrane transporter activity
AM352_RS05970	COG1765	OsmC-like protein
AM352_RS05975	COG3954	Phosphoribulokinase
AM352_RS05985	COG0429	hydrolase of the alpha beta-hydrolase fold
AM352_RS06015	COG0679	Auxin Efflux Carrier
AM352_RS06025	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM352_RS06035	COG0488	(ABC) transporter
AM352_RS06050	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
AM352_RS06055	COG1047	Peptidyl-prolyl cis-trans
AM352_RS06065	COG0545	Peptidyl-prolyl cis-trans isomerase
AM352_RS06070	COG2964	Protein conserved in bacteria
AM352_RS06130	COG0051	transcription antitermination factor activity, RNA binding
AM352_RS06235	COG0201	protein transport
AM352_RS06265	COG0203	ribosomal protein L17
AM352_RS06275	COG0789	Transcriptional regulator
AM352_RS06280	COG3036	rescue of stalled ribosome
AM352_RS06310	COG0758	DNA mediated transformation
AM352_RS06320	COG0551	DNA topoisomerase type I activity
AM352_RS06340	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM352_RS06380	COG1126	abc transporter atp-binding protein
AM352_RS06385	COG0765	amino acid transport
AM352_RS06390	COG4597	amino acid ABC transporter
AM352_RS06395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS06405	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM352_RS06410	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS06415	COG1309	transcriptional regulator
AM352_RS06425	COG2189	Belongs to the N(4) N(6)-methyltransferase family
AM352_RS06450	COG4145	pantothenate transmembrane transporter activity
AM352_RS06455	COG3924	membrane
AM352_RS06460	COG0439	Biotin carboxylase
AM352_RS06465	COG0511	ligase activity, forming carbon-carbon bonds
AM352_RS06490	COG0604	alcohol dehydrogenase
AM352_RS06495	COG2200	EAL domain
AM352_RS06495	COG2199	diguanylate cyclase activity
AM352_RS06505	COG1077	Cell shape determining protein MreB Mrl
AM352_RS06510	COG1792	Involved in formation and maintenance of cell shape
AM352_RS06515	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
AM352_RS06530	COG3164	Protein of unknown function
AM352_RS06535	COG0312	modulator of DNA gyrase
AM352_RS06540	COG0583	DNA-binding transcription factor activity
AM352_RS06560	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS06565	COG2732	(Barnase) inhibitor
AM352_RS06585	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM352_RS06590	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM352_RS06595	COG3105	Protein conserved in bacteria
AM352_RS06600	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
AM352_RS06625	COG0625	glutathione transferase activity
AM352_RS06630	COG2969	positive regulation of protein catabolic process
AM352_RS06660	COG2731	YhcH YjgK YiaL family protein
AM352_RS06665	COG4804	nuclease activity
AM352_RS06670	COG0493	'glutamate synthase
AM352_RS06675	COG0067	glutamate synthase
AM352_RS06675	COG0070	glutamate synthase
AM352_RS06675	COG0069	glutamate synthase activity
AM352_RS06690	COG1242	4 iron, 4 sulfur cluster binding
AM352_RS06695	COG2198	Histidine kinase
AM352_RS06695	COG5002	protein histidine kinase activity
AM352_RS06695	COG0784	Response regulator, receiver
AM352_RS06700	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
AM352_RS06710	COG0515	serine threonine protein kinase
AM352_RS06715	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS06730	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM352_RS06740	COG1137	ATPase activity
AM352_RS06745	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
AM352_RS06750	COG3117	lipopolysaccharide transmembrane transporter activity
AM352_RS06755	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
AM352_RS06765	COG0530	calcium, potassium:sodium antiporter activity
AM352_RS06770	COG1127	ABC transporter
AM352_RS06775	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
AM352_RS06780	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM352_RS06785	COG2854	intermembrane phospholipid transfer
AM352_RS06790	COG3113	response to antibiotic
AM352_RS06795	COG5007	Belongs to the BolA IbaG family
AM352_RS06805	COG3423	Transcriptional regulator
AM352_RS06810	COG0142	geranyltranstransferase activity
AM352_RS06825	COG0697	spore germination
AM352_RS06835	COG2027	D-alanyl-D-alanine carboxypeptidase
AM352_RS06845	COG1534	Rna-binding protein
AM352_RS06860	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
AM352_RS06870	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
AM352_RS06895	COG0195	Participates in both transcription termination and antitermination
AM352_RS06915	COG0184	Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome
AM352_RS06930	COG0513	Belongs to the DEAD box helicase family
AM352_RS06935	COG0814	amino acid
AM352_RS06940	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
AM352_RS06945	COG0826	peptidase U32
AM352_RS06950	COG0826	peptidase U32
AM352_RS06955	COG3154	lipid carrier protein
AM352_RS06960	COG3153	acetyltransferase
AM352_RS06975	COG0702	epimerase
AM352_RS06980	COG0701	Predicted permease
AM352_RS06985	COG2823	Periplasmic or secreted lipoprotein
AM352_RS07005	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
AM352_RS07015	COG0363	glucosamine-6-phosphate deaminase activity
AM352_RS07020	COG3716	PTS system mannose fructose sorbose family IID component
AM352_RS07025	COG3715	PTS system
AM352_RS07030	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS07040	COG2222	sugar isomerase
AM352_RS07045	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM352_RS07050	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS07055	COG3716	PTS system mannose fructose sorbose family IID component
AM352_RS07065	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS07075	COG1349	DNA-binding transcription factor activity
AM352_RS07080	COG2721	sulfolactate sulfo-lyase activity
AM352_RS07090	COG2084	Dehydrogenase
AM352_RS07095	COG1929	Belongs to the glycerate kinase type-1 family
AM352_RS07105	COG0583	DNA-binding transcription factor activity
AM352_RS07125	COG1882	Formate acetyltransferase
AM352_RS07130	COG0251	oxidation-reduction process
AM352_RS07135	COG1760	l-serine dehydratase
AM352_RS07140	COG0814	amino acid
AM352_RS07155	COG1741	Belongs to the pirin family
AM352_RS07160	COG0583	DNA-binding transcription factor activity
AM352_RS07165	COG3152	Membrane
AM352_RS07170	COG0435	Glutathione S-transferase
AM352_RS07185	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
AM352_RS07190	COG4575	ribosome binding
AM352_RS07195	COG1422	Protein of unknown function (DUF1090)
AM352_RS07205	COG0586	Pfam SNARE associated Golgi protein
AM352_RS07210	COG2186	Transcriptional regulator
AM352_RS07215	COG2271	Major facilitator Superfamily
AM352_RS07225	COG2721	sulfolactate sulfo-lyase activity
AM352_RS07240	COG0673	inositol 2-dehydrogenase activity
AM352_RS07245	COG1451	nucleotide metabolic process
AM352_RS07255	COG1902	pentaerythritol trinitrate reductase activity
AM352_RS07255	COG0446	pyridine nucleotide-disulphide oxidoreductase
AM352_RS07260	COG1626	Provides the cells with the ability to utilize trehalose at high osmolarity by splitting it into glucose molecules that can subsequently be taken up by the phosphotransferase-mediated uptake system
AM352_RS07260	COG3408	Glycogen debranching enzyme
AM352_RS07270	COG0531	amino acid
AM352_RS07275	COG2731	YhcH YjgK YiaL family protein
AM352_RS07280	COG3250	beta-galactosidase activity
AM352_RS07285	COG1609	Transcriptional regulator
AM352_RS07290	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
AM352_RS07300	COG0840	transmembrane signaling receptor activity
AM352_RS07310	COG1695	Transcriptional regulator
AM352_RS07315	COG2375	cellular response to nickel ion
AM352_RS07370	COG0828	Belongs to the bacterial ribosomal protein bS21 family
AM352_RS07425	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS07430	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS07445	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM352_RS07460	COG4991	sh3 domain protein
AM352_RS07465	COG3025	triphosphatase activity
AM352_RS07505	COG3384	dioxygenase
AM352_RS07515	COG0754	glutathionylspermidine amidase activity
AM352_RS07530	COG1538	Outer membrane efflux protein
AM352_RS07535	COG0494	nUDIX hydrolase
AM352_RS07540	COG3151	Protein conserved in bacteria
AM352_RS07545	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
AM352_RS07550	COG3150	esterase
AM352_RS07570	COG2211	Major facilitator Superfamily
AM352_RS07575	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AM352_RS07580	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
AM352_RS07585	COG2249	NAD(P)H dehydrogenase (quinone) activity
AM352_RS07600	COG3111	PFAM Bacterial OB fold (BOF) protein
AM352_RS07630	COG0656	L-ascorbic acid biosynthetic process
AM352_RS07635	COG1979	alcohol dehydrogenase
AM352_RS07640	COG2207	Transcriptional regulator
AM352_RS07645	COG0586	Pfam SNARE associated Golgi protein
AM352_RS07655	COG0626	cystathionine gamma-synthase activity
AM352_RS07670	COG0848	biopolymer transport protein
AM352_RS07690	COG0667	Aldo Keto reductase
AM352_RS07700	COG0840	transmembrane signaling receptor activity
AM352_RS07710	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
AM352_RS07715	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS07720	COG5557	Pfam Polysulphide reductase, NrfD
AM352_RS07725	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
AM352_RS07730	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM352_RS07735	COG1773	rubredoxin
AM352_RS07745	COG0298	carbon dioxide binding
AM352_RS07750	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM352_RS07760	COG0625	glutathione transferase activity
AM352_RS07765	COG0243	molybdopterin cofactor binding
AM352_RS07770	COG0754	glutathionylspermidine amidase activity
AM352_RS07775	COG1064	alcohol dehydrogenase
AM352_RS07780	COG2207	Transcriptional regulator
AM352_RS07820	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS07820	COG2205	protein histidine kinase activity
AM352_RS07820	COG0784	Response regulator, receiver
AM352_RS07820	COG2198	Histidine kinase
AM352_RS07825	COG2197	response regulator
AM352_RS07840	COG1566	PFAM secretion protein HlyD family protein
AM352_RS07860	COG1811	Na channel or pump
AM352_RS07870	COG1982	Orn Lys Arg decarboxylase major
AM352_RS07875	COG2211	Major facilitator Superfamily
AM352_RS07890	COG1194	a g-specific adenine glycosylase
AM352_RS07900	COG3171	Protein conserved in bacteria
AM352_RS07910	COG0252	asparaginase activity
AM352_RS07915	COG0635	Involved in the biosynthesis of porphyrin-containing compound
AM352_RS07930	COG0762	integral membrane protein
AM352_RS07935	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
AM352_RS07940	COG2805	Type II/IV secretion system protein
AM352_RS07955	COG0189	ligase activity
AM352_RS07960	COG1385	rRNA (uridine-N3-)-methyltransferase activity
AM352_RS07965	COG2356	endonuclease I
AM352_RS07975	COG2814	Major facilitator Superfamily
AM352_RS07995	COG1166	arginine decarboxylase activity
AM352_RS08015	COG0501	Belongs to the peptidase M48B family
AM352_RS08020	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM352_RS08025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS08030	COG2213	PTS system mannitol-specific
AM352_RS08035	COG1063	alcohol dehydrogenase
AM352_RS08040	COG1494	fructose-1,6-bisphosphatase
AM352_RS08050	COG1072	(Pantothenic acid kinase))
AM352_RS08055	COG1122	ATPase activity
AM352_RS08060	COG1122	ATPase activity
AM352_RS08095	COG0191	fructose-bisphosphate aldolase activity
AM352_RS08100	COG0549	Belongs to the carbamate kinase family
AM352_RS08105	COG2271	Major facilitator Superfamily
AM352_RS08110	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM352_RS08115	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM352_RS08125	COG0583	DNA-binding transcription factor activity
AM352_RS08130	COG0668	transmembrane transport
AM352_RS08145	COG2968	Membrane
AM352_RS08165	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
AM352_RS08170	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
AM352_RS08195	COG0006	proline dipeptidase activity
AM352_RS08200	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM352_RS08205	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM352_RS08230	COG2723	6-phospho-beta-galactosidase activity
AM352_RS08235	COG1737	Transcriptional regulator
AM352_RS08245	COG1272	protein, Hemolysin III
AM352_RS08260	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
AM352_RS08270	COG0716	FMN binding
AM352_RS08285	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
AM352_RS08310	COG4942	peptidase
AM352_RS08320	COG1556	Lactate utilization protein
AM352_RS08325	COG1139	Iron-sulfur cluster binding protein
AM352_RS08330	COG0247	lactate metabolic process
AM352_RS08335	COG1620	l-lactate permease
AM352_RS08340	COG3592	Divergent 4Fe-4S mono-cluster
AM352_RS08345	COG2388	GCN5-related N-acetyl-transferase
AM352_RS08365	COG3121	Chaperone
AM352_RS08390	COG2771	luxR family
AM352_RS08405	COG0814	amino acid
AM352_RS08420	COG0183	Belongs to the thiolase family
AM352_RS08430	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS08440	COG1794	racemase activity, acting on amino acids and derivatives
AM352_RS08445	COG0583	DNA-binding transcription factor activity
AM352_RS08455	COG1609	Transcriptional regulator
AM352_RS08485	COG0667	Aldo Keto reductase
AM352_RS08495	COG0861	Integral membrane protein TerC family
AM352_RS08525	COG2165	general secretion pathway protein
AM352_RS08530	COG4795	General secretion pathway protein
AM352_RS08540	COG4967	type IV pilus modification protein PilV
AM352_RS08545	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
AM352_RS08555	COG1074	ATP-dependent DNA helicase activity
AM352_RS08560	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
AM352_RS08565	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
AM352_RS08565	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
AM352_RS08570	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM352_RS08590	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
AM352_RS08595	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
AM352_RS08600	COG2166	iron-sulfur cluster assembly
AM352_RS08605	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
AM352_RS08615	COG0583	DNA-binding transcription factor activity
AM352_RS08620	COG2363	Small membrane protein
AM352_RS08630	COG1349	DNA-binding transcription factor activity
AM352_RS08650	COG0738	Major facilitator superfamily
AM352_RS08660	COG0235	Class ii aldolase
AM352_RS08665	COG1454	alcohol dehydrogenase
AM352_RS08680	COG1760	l-serine dehydratase
AM352_RS08685	COG0814	amino acid
AM352_RS08695	COG1611	Belongs to the LOG family
AM352_RS08710	COG3098	single-species biofilm formation
AM352_RS08715	COG0564	pseudouridine synthase activity
AM352_RS08720	COG0716	FMN binding
AM352_RS08730	COG2271	Major facilitator Superfamily
AM352_RS08735	COG4948	Mandelate Racemase Muconate Lactonizing
AM352_RS08740	COG4948	Mandelate Racemase Muconate Lactonizing
AM352_RS08745	COG1929	Belongs to the glycerate kinase type-1 family
AM352_RS08750	COG3850	Histidine kinase
AM352_RS08750	COG3437	response regulator, receiver
AM352_RS08750	COG2205	protein histidine kinase activity
AM352_RS08750	COG4999	Histidine kinase
AM352_RS08760	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
AM352_RS08765	COG3956	TIGRFAM MazG family protein
AM352_RS08785	COG0602	queuosine metabolic process
AM352_RS08790	COG1070	Carbohydrate kinase
AM352_RS08795	COG2223	nitrite transmembrane transporter activity
AM352_RS08800	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS08805	COG0277	FAD linked oxidase domain protein
AM352_RS08810	COG0477	Major facilitator Superfamily
AM352_RS08815	COG2086	electron transfer activity
AM352_RS08820	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
AM352_RS08825	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
AM352_RS08830	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
AM352_RS08835	COG0644	oxidoreductase
AM352_RS08840	COG0720	synthase
AM352_RS08870	COG2234	aminopeptidase activity
AM352_RS08925	COG4942	peptidase
AM352_RS08925	COG1388	LysM domain
AM352_RS08940	COG0163	prenyltransferase activity
AM352_RS08945	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
AM352_RS08960	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM352_RS08965	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM352_RS08970	COG1121	(ABC) transporter
AM352_RS08995	COG0309	Hydrogenase expression formation protein (HypE)
AM352_RS09000	COG0409	Hydrogenase expression formation protein
AM352_RS09005	COG0298	carbon dioxide binding
AM352_RS09010	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
AM352_RS09015	COG0375	protein maturation
AM352_RS09025	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS09030	COG0651	ATP synthesis coupled electron transport
AM352_RS09035	COG0650	Formate hydrogenlyase subunit 4
AM352_RS09040	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
AM352_RS09040	COG3261	NADH dehydrogenase
AM352_RS09045	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM352_RS09050	COG3260	NADH ubiquinone oxidoreductase 20
AM352_RS09060	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
AM352_RS09065	COG2723	6-phospho-beta-galactosidase activity
AM352_RS09070	COG1263	PTS System
AM352_RS09070	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS09075	COG1609	Transcriptional regulator
AM352_RS09080	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS09085	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
AM352_RS09105	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
AM352_RS09105	COG0517	IMP dehydrogenase activity
AM352_RS09110	COG1349	DNA-binding transcription factor activity
AM352_RS09115	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS09120	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS09130	COG3732	PTS system glucitol sorbitol-specific
AM352_RS09135	COG3730	PTS system glucitol sorbitol-specific
AM352_RS09140	COG2951	lytic endotransglycosylase activity
AM352_RS09150	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM352_RS09160	COG1546	Belongs to the CinA family
AM352_RS09180	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
AM352_RS09210	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM352_RS09215	COG1238	metal cluster binding
AM352_RS09235	COG2814	Major facilitator Superfamily
AM352_RS09240	COG1566	PFAM secretion protein HlyD family protein
AM352_RS09245	COG1846	Transcriptional regulator
AM352_RS09255	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
AM352_RS09260	COG2814	Major facilitator Superfamily
AM352_RS09270	COG4176	ABC-type proline glycine betaine transport system permease component
AM352_RS09305	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM352_RS09315	COG4575	ribosome binding
AM352_RS09340	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
AM352_RS09345	COG1652	LysM domain
AM352_RS09350	COG1802	Transcriptional regulator
AM352_RS09355	COG1113	amino acid transport
AM352_RS09360	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
AM352_RS09365	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS09370	COG0579	oxidoreductase
AM352_RS09435	COG3962	Belongs to the TPP enzyme family
AM352_RS09440	COG0673	inositol 2-dehydrogenase activity
AM352_RS09455	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS09460	COG0673	inositol 2-dehydrogenase activity
AM352_RS09465	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS09475	COG3718	enzyme involved in inositol metabolism
AM352_RS09480	COG0840	transmembrane signaling receptor activity
AM352_RS09490	COG1129	ABC transporter
AM352_RS09495	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS09535	COG3477	response to acidic pH
AM352_RS09570	COG2003	Belongs to the UPF0758 family
AM352_RS09605	COG3596	GTP binding
AM352_RS09610	COG4983	Phage plasmid primase, P4 family domain protein
AM352_RS09700	COG0582	viral genome integration into host DNA
AM352_RS09715	COG2867	negative regulation of translational initiation
AM352_RS09725	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM352_RS09730	COG0497	DNA recombination
AM352_RS09750	COG4536	flavin adenine dinucleotide binding
AM352_RS09755	COG4137	Cytochrome C assembly protein
AM352_RS09760	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
AM352_RS09795	COG2885	chlorophyll binding
AM352_RS09800	COG2199	diguanylate cyclase activity
AM352_RS09820	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM352_RS09825	COG1605	Chorismate mutase
AM352_RS09825	COG0287	Prephenate dehydrogenase
AM352_RS09830	COG0077	Prephenate dehydratase
AM352_RS09830	COG1605	Chorismate mutase
AM352_RS09840	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
AM352_RS09845	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM352_RS09850	COG0564	pseudouridine synthase activity
AM352_RS09860	COG0542	response to heat
AM352_RS09885	COG0477	Major facilitator Superfamily
AM352_RS09890	COG5544	Lipoprotein
AM352_RS09895	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM352_RS09905	COG3148	PFAM DTW domain containing protein
AM352_RS09910	COG3118	belongs to the thioredoxin family
AM352_RS09915	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
AM352_RS09930	COG0513	Belongs to the DEAD box helicase family
AM352_RS09940	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
AM352_RS09955	COG3026	antisigma factor binding
AM352_RS09960	COG3086	response to oxidative stress
AM352_RS09970	COG0681	Belongs to the peptidase S26 family
AM352_RS09995	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
AM352_RS10005	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS10010	COG1737	Transcriptional regulator
AM352_RS10020	COG0560	Phosphoserine phosphatase
AM352_RS10060	COG2205	protein histidine kinase activity
AM352_RS10065	COG3170	Tfp pilus assembly protein FimV
AM352_RS10070	COG2204	response regulator
AM352_RS10075	COG0347	Belongs to the P(II) protein family
AM352_RS10095	COG1940	carbohydrate kinase activity
AM352_RS10100	COG0457	Tetratricopeptide repeat
AM352_RS10105	COG0477	Major facilitator Superfamily
AM352_RS10105	COG2814	Major facilitator Superfamily
AM352_RS10110	COG2017	converts alpha-aldose to the beta-anomer
AM352_RS10115	COG2814	Major facilitator Superfamily
AM352_RS10120	COG3711	transcriptional antiterminator
AM352_RS10125	COG3683	transport system, periplasmic component
AM352_RS10130	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
AM352_RS10155	COG0822	iron-sulfur transferase activity
AM352_RS10175	COG0633	Ferredoxin
AM352_RS10180	COG2975	iron-sulfur cluster assembly
AM352_RS10195	COG2897	thiosulfate sulfurtransferase activity
AM352_RS10200	COG2373	Large extracellular alpha-helical protein
AM352_RS10205	COG4953	penicillin-binding protein 1C
AM352_RS10240	COG2976	Protein conserved in bacteria
AM352_RS10260	COG1645	bacterial-type flagellum-dependent swarming motility
AM352_RS10270	COG0516	GMP reductase activity
AM352_RS10270	COG0517	IMP dehydrogenase activity
AM352_RS10280	COG0582	viral genome integration into host DNA
AM352_RS10320	COG3846	protein secretion by the type IV secretion system
AM352_RS10325	COG3093	addiction module antidote protein HigA
AM352_RS10335	COG3093	addiction module antidote protein HigA
AM352_RS10345	COG2200	EAL domain
AM352_RS10360	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
AM352_RS10375	COG2723	6-phospho-beta-galactosidase activity
AM352_RS10385	COG2233	PERMEase
AM352_RS10395	COG0260	Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides
AM352_RS10400	COG1446	asparaginase
AM352_RS10405	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM352_RS10415	COG1393	Belongs to the ArsC family
AM352_RS10420	COG4783	chaperone-mediated protein folding
AM352_RS10430	COG0628	permease
AM352_RS10435	COG3366	ferrous iron transmembrane transporter activity
AM352_RS10440	COG0700	Nucleoside recognition
AM352_RS10445	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM352_RS10450	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
AM352_RS10455	COG2716	regulation of RNA biosynthetic process
AM352_RS10465	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
AM352_RS10475	COG2321	neutral zinc metallopeptidase
AM352_RS10485	COG0400	carboxylic ester hydrolase activity
AM352_RS10500	COG1393	Belongs to the ArsC family
AM352_RS10510	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM352_RS10515	COG3850	Histidine kinase
AM352_RS10520	COG0493	'glutamate synthase
AM352_RS10520	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS10530	COG5342	invasion associated locus B
AM352_RS10535	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
AM352_RS10635	COG2207	Transcriptional regulator
AM352_RS10645	COG0860	N-Acetylmuramoyl-L-alanine amidase
AM352_RS10665	COG2837	iron assimilation
AM352_RS10670	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM352_RS10675	COG1263	PTS System
AM352_RS10675	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS10685	COG3110	Uncharacterized protein conserved in bacteria (DUF2057)
AM352_RS10705	COG4150	thiosulfate binding
AM352_RS10710	COG0555	PFAM binding-protein-dependent transport systems inner membrane component
AM352_RS10715	COG4208	sulfate ABC transporter
AM352_RS10720	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
AM352_RS10760	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS10785	COG3530	Putative quorum-sensing-regulated virulence factor
AM352_RS10790	COG0385	Bile acid
AM352_RS10795	COG0583	DNA-binding transcription factor activity
AM352_RS10805	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
AM352_RS10810	COG2211	Major facilitator Superfamily
AM352_RS10815	COG0583	DNA-binding transcription factor activity
AM352_RS10845	COG3415	Transposase
AM352_RS10850	COG3415	Transposase
AM352_RS10865	COG2199	diguanylate cyclase activity
AM352_RS10865	COG2200	EAL domain
AM352_RS10870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM352_RS10885	COG0667	Aldo Keto reductase
AM352_RS10890	COG3961	Belongs to the TPP enzyme family
AM352_RS10905	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS10910	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS10915	COG0006	proline dipeptidase activity
AM352_RS10920	COG1363	Peptidase, m42
AM352_RS10925	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM352_RS10925	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS10925	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS10930	COG2207	Transcriptional regulator
AM352_RS10935	COG3279	Response regulator of the LytR AlgR family
AM352_RS10940	COG3275	phosphorelay sensor kinase activity
AM352_RS10945	COG0436	Aminotransferase
AM352_RS10955	COG1560	Kdo2-lipid A biosynthetic process
AM352_RS10970	COG5001	Diguanylate cyclase
AM352_RS10970	COG1716	ATPase activity
AM352_RS10985	COG1574	metal-dependent hydrolase with the TIM-barrel fold
AM352_RS11000	COG0583	DNA-binding transcription factor activity
AM352_RS11010	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM352_RS11015	COG2202	Pas domain
AM352_RS11015	COG2200	EAL domain
AM352_RS11015	COG2199	diguanylate cyclase activity
AM352_RS11030	COG2814	Major facilitator Superfamily
AM352_RS11040	COG2116	formate transmembrane transporter activity
AM352_RS11050	COG2067	long-chain fatty acid transport protein
AM352_RS11060	COG3691	Protein conserved in bacteria
AM352_RS11075	COG2062	phosphohistidine phosphatase, SixA
AM352_RS11100	COG0730	response to heat
AM352_RS11105	COG3101	peptidyl-lysine hydroxylation
AM352_RS11120	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM352_RS11160	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
AM352_RS11170	COG0586	Pfam SNARE associated Golgi protein
AM352_RS11185	COG0285	dihydrofolate synthase activity
AM352_RS11190	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
AM352_RS11195	COG1286	toxin biosynthetic process
AM352_RS11200	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
AM352_RS11220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS11230	COG4160	amino acid transport
AM352_RS11235	COG4598	ABC transporter
AM352_RS11240	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM352_RS11245	COG1090	epimerase
AM352_RS11250	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
AM352_RS11255	COG0625	glutathione transferase activity
AM352_RS11260	COG0622	Phosphoesterase
AM352_RS11270	COG1609	Transcriptional regulator
AM352_RS11275	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS11285	COG3037	sugar-specific permease SgaT UlaA
AM352_RS11290	COG3959	Transketolase, thiamine diphosphate binding domain
AM352_RS11295	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
AM352_RS11305	COG1288	antiporter activity
AM352_RS11330	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM352_RS11335	COG0490	domain, Protein
AM352_RS11335	COG0471	metal ion transport
AM352_RS11345	COG0436	Aminotransferase
AM352_RS11350	COG0583	DNA-binding transcription factor activity
AM352_RS11395	COG0839	Belongs to the complex I subunit 6 family
AM352_RS11405	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
AM352_RS11410	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM352_RS11420	COG0784	Response regulator, receiver
AM352_RS11420	COG0835	chemotaxis
AM352_RS11430	COG2153	protein acetylation
AM352_RS11435	COG4575	ribosome binding
AM352_RS11440	COG1169	isochorismate synthase
AM352_RS11485	COG0247	lactate metabolic process
AM352_RS11495	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
AM352_RS11500	COG2271	Major facilitator Superfamily
AM352_RS11505	COG0584	glycerophosphoryl diester phosphodiesterase
AM352_RS11510	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM352_RS11520	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
AM352_RS11535	COG0183	Belongs to the thiolase family
AM352_RS11540	COG2031	fatty acid transporter
AM352_RS11545	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
AM352_RS11550	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
AM352_RS11555	COG2204	response regulator
AM352_RS11560	COG3852	Histidine kinase
AM352_RS11570	COG2197	response regulator
AM352_RS11575	COG0642	Histidine kinase
AM352_RS11575	COG2198	Histidine kinase
AM352_RS11600	COG2169	Transcriptional regulator
AM352_RS11600	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM352_RS11605	COG3145	DNA-N1-methyladenine dioxygenase activity
AM352_RS11610	COG4615	Cyclic peptide transporter
AM352_RS11615	COG2239	Acts as a magnesium transporter
AM352_RS11630	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS11630	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
AM352_RS11635	COG3062	negative regulation of establishment of protein localization
AM352_RS11645	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS11650	COG0348	domain, Protein
AM352_RS11655	COG3043	anaerobic respiration
AM352_RS11660	COG3005	denitrification pathway
AM352_RS11665	COG4133	protoheme IX ABC transporter activity
AM352_RS11675	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM352_RS11680	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
AM352_RS11690	COG1138	Cytochrome C-type biogenesis protein
AM352_RS11695	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM352_RS11700	COG4235	cytochrome complex assembly
AM352_RS11700	COG3088	subunit of a heme lyase
AM352_RS11705	COG2197	response regulator
AM352_RS11740	COG1061	Type III restriction enzyme res subunit
AM352_RS11745	COG1187	pseudouridine synthase activity
AM352_RS11750	COG2814	Major facilitator Superfamily
AM352_RS11760	COG4172	Belongs to the ABC transporter superfamily
AM352_RS11765	COG4239	(ABC) transporter, permease
AM352_RS11770	COG4174	ABC transporter (Permease)
AM352_RS11775	COG4166	transmembrane transport
AM352_RS11780	COG2200	EAL domain
AM352_RS11785	COG0791	NLP P60 protein
AM352_RS11795	COG0671	phosphoesterase, PA-phosphatase related
AM352_RS11800	COG0523	cobalamin synthesis protein
AM352_RS11805	COG0246	Mannitol dehydrogenase
AM352_RS11835	COG1105	Belongs to the carbohydrate kinase PfkB family
AM352_RS11840	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS11840	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
AM352_RS11840	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS11845	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS11850	COG2313	pseudouridylate synthase activity
AM352_RS11855	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
AM352_RS11860	COG1522	sequence-specific DNA binding
AM352_RS11860	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS11870	COG2855	membrane
AM352_RS11875	COG0583	DNA-binding transcription factor activity
AM352_RS11880	COG0833	amino acid
AM352_RS11885	COG4771	TonB-dependent receptor
AM352_RS11890	COG2271	Major facilitator Superfamily
AM352_RS11895	COG0560	Phosphoserine phosphatase
AM352_RS11900	COG1760	l-serine dehydratase
AM352_RS11920	COG2311	Membrane
AM352_RS11940	COG1129	ABC transporter
AM352_RS11955	COG2949	membrane
AM352_RS11965	COG1346	cytolysis
AM352_RS11980	COG2271	Major facilitator Superfamily
AM352_RS11995	COG0625	glutathione transferase activity
AM352_RS12000	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM352_RS12005	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
AM352_RS12010	COG1538	Outer membrane efflux protein
AM352_RS12015	COG0586	Pfam SNARE associated Golgi protein
AM352_RS12025	COG1686	Belongs to the peptidase S11 family
AM352_RS12030	COG0277	FAD linked oxidase domain protein
AM352_RS12040	COG1472	Belongs to the glycosyl hydrolase 3 family
AM352_RS12045	COG1732	Glycine betaine
AM352_RS12050	COG1174	glycine betaine transport
AM352_RS12055	COG1125	glycine betaine transport
AM352_RS12060	COG1174	glycine betaine transport
AM352_RS12070	COG0789	Transcriptional regulator
AM352_RS12075	COG3275	phosphorelay sensor kinase activity
AM352_RS12085	COG4807	Protein conserved in bacteria
AM352_RS12110	COG3121	Chaperone
AM352_RS12115	COG3188	usher protein
AM352_RS12125	COG5455	response to cobalt ion
AM352_RS12135	COG0351	phosphomethylpyrimidine kinase
AM352_RS12140	COG2188	Transcriptional regulator
AM352_RS12145	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS12150	COG1397	ADP-ribosylglycohydrolase
AM352_RS12155	COG2211	Major facilitator Superfamily
AM352_RS12160	COG1830	Aldolase
AM352_RS12165	COG1070	Carbohydrate kinase
AM352_RS12190	COG1070	Carbohydrate kinase
AM352_RS12200	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM352_RS12220	COG0826	peptidase U32
AM352_RS12225	COG0745	RESPONSE REGULATOR receiver
AM352_RS12230	COG2205	protein histidine kinase activity
AM352_RS12255	COG0443	Heat shock 70 kDa protein
AM352_RS12265	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
AM352_RS12270	COG5002	protein histidine kinase activity
AM352_RS12270	COG3447	MASE1 domain protein
AM352_RS12270	COG5001	Diguanylate cyclase
AM352_RS12285	COG2982	Protein involved in outer membrane biogenesis
AM352_RS12290	COG1253	flavin adenine dinucleotide binding
AM352_RS12310	COG0489	protein tyrosine kinase activity
AM352_RS12310	COG3206	protein involved in exopolysaccharide biosynthesis
AM352_RS12315	COG0463	Glycosyl transferase, family 2
AM352_RS12320	COG1045	serine acetyltransferase
AM352_RS12325	COG0438	transferase activity, transferring glycosyl groups
AM352_RS12335	COG1216	Glycosyl transferase, family 2
AM352_RS12340	COG0110	maltose O-acetyltransferase activity
AM352_RS12345	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
AM352_RS12350	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM352_RS12355	COG1051	belongs to the nudix hydrolase family
AM352_RS12360	COG0297	glycogen (starch) synthase activity
AM352_RS12370	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AM352_RS12375	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
AM352_RS12380	COG2244	polysaccharide biosynthetic process
AM352_RS12385	COG2327	Polysaccharide pyruvyl transferase
AM352_RS12450	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
AM352_RS12475	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
AM352_RS12505	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM352_RS12510	COG0583	DNA-binding transcription factor activity
AM352_RS12520	COG0531	amino acid
AM352_RS12525	COG2925	Exonuclease
AM352_RS12540	COG1289	transmembrane transporter activity
AM352_RS12575	COG4656	Part of a membrane complex involved in electron transport
AM352_RS12580	COG1454	alcohol dehydrogenase
AM352_RS12580	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS12595	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
AM352_RS12770	COG0583	DNA-binding transcription factor activity
AM352_RS12810	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS12815	COG4106	trans-aconitate 2-methyltransferase activity
AM352_RS12835	COG0534	Mate efflux family protein
AM352_RS12845	COG3122	Protein conserved in bacteria
AM352_RS12860	COG1733	regulation of RNA biosynthetic process
AM352_RS12885	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
AM352_RS12890	COG0477	Major facilitator Superfamily
AM352_RS12895	COG1120	ATPase activity
AM352_RS12905	COG4139	cobalamin transport
AM352_RS12920	COG0583	DNA-binding transcription factor activity
AM352_RS13015	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM352_RS13020	COG1418	mRNA catabolic process
AM352_RS13025	COG0270	DNA (cytosine-5-)-methyltransferase activity
AM352_RS13030	COG3727	T/G mismatch-specific endonuclease activity
AM352_RS13035	COG0697	spore germination
AM352_RS13040	COG2354	Protein conserved in bacteria
AM352_RS13045	COG5475	Uncharacterized small protein (DUF2158)
AM352_RS13065	COG2197	response regulator
AM352_RS13080	COG1338	Plays a role in the flagellum-specific transport system
AM352_RS13140	COG0425	Belongs to the sulfur carrier protein TusA family
AM352_RS13155	COG0366	Alpha amylase catalytic
AM352_RS13175	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM352_RS13180	COG0500	methyltransferase
AM352_RS13220	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS13230	COG0765	amino acid transport
AM352_RS13235	COG1126	abc transporter atp-binding protein
AM352_RS13240	COG2197	response regulator
AM352_RS13250	COG2197	response regulator
AM352_RS13280	COG3012	SEC-C Motif Domain Protein
AM352_RS13280	COG3318	Belongs to the UPF0149 family
AM352_RS13285	COG0814	amino acid
AM352_RS13295	COG1528	Iron-storage protein
AM352_RS13315	COG1528	Iron-storage protein
AM352_RS13330	COG1879	ABC-type sugar transport system periplasmic component
AM352_RS13335	COG1129	ABC transporter
AM352_RS13340	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS13395	COG1301	dicarboxylic acid transport
AM352_RS13405	COG0840	transmembrane signaling receptor activity
AM352_RS13420	COG0745	RESPONSE REGULATOR receiver
AM352_RS13430	COG3539	Fimbrial protein
AM352_RS13435	COG3188	usher protein
AM352_RS13440	COG3121	Chaperone
AM352_RS13445	COG3539	Fimbrial protein
AM352_RS13475	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
AM352_RS13490	COG3102	Protein conserved in bacteria
AM352_RS13515	COG3788	relative of glutathione S-transferase, MAPEG superfamily
AM352_RS13520	COG1801	Protein of unknown function DUF72
AM352_RS13525	COG1335	isochorismatase
AM352_RS13535	COG0494	nUDIX hydrolase
AM352_RS13560	COG1108	ABC-type Mn2 Zn2 transport systems permease components
AM352_RS13570	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
AM352_RS13575	COG0739	heme binding
AM352_RS13580	COG1560	Kdo2-lipid A biosynthetic process
AM352_RS13590	COG1737	Transcriptional regulator
AM352_RS13595	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
AM352_RS13600	COG0129	dihydroxy-acid dehydratase activity
AM352_RS13605	COG0800	Aldolase
AM352_RS13615	COG3141	response to X-ray
AM352_RS13625	COG2979	Protein of unknown function (DUF533)
AM352_RS13630	COG1770	oligopeptidase
AM352_RS13635	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM352_RS13640	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM352_RS13650	COG2372	response to copper ion
AM352_RS13655	COG1276	copper resistance
AM352_RS13670	COG4771	TonB-dependent receptor
AM352_RS13675	COG0639	Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP
AM352_RS13695	COG3008	intermembrane lipid transfer
AM352_RS13700	COG2995	paraquat-inducible protein a
AM352_RS13705	COG1956	GAF domain-containing protein
AM352_RS13725	COG2814	Major facilitator Superfamily
AM352_RS13730	COG1414	Transcriptional regulator
AM352_RS13760	COG0768	penicillin binding
AM352_RS13765	COG2226	methyltransferase
AM352_RS13780	COG3716	PTS system mannose fructose sorbose family IID component
AM352_RS13785	COG3715	PTS system
AM352_RS13790	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS13790	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS13805	COG1253	flavin adenine dinucleotide binding
AM352_RS13810	COG2200	EAL domain
AM352_RS13815	COG1760	l-serine dehydratase
AM352_RS13835	COG0251	oxidation-reduction process
AM352_RS13840	COG1199	ATP-dependent helicase activity
AM352_RS13845	COG1214	PFAM Peptidase M22, glycoprotease
AM352_RS13850	COG3065	identical protein binding
AM352_RS13860	COG0318	PFAM AMP-dependent synthetase and ligase
AM352_RS13865	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
AM352_RS13870	COG0473	3-isopropylmalate dehydrogenase activity
AM352_RS13875	COG0583	DNA-binding transcription factor activity
AM352_RS13880	COG0851	Prevents the cell division inhibition by proteins MinC and MinD at internal division sites while permitting inhibition at polar sites. This ensures cell division at the proper site by restricting the formation of a division septum at the midpoint of the long axis of the cell
AM352_RS13885	COG2894	cell division
AM352_RS13900	COG0179	Fumarylacetoacetate (FAA) hydrolase
AM352_RS13930	COG2719	SpoVR family
AM352_RS13940	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
AM352_RS13950	COG1619	proteins homologs of microcin C7 resistance protein MccF
AM352_RS13960	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
AM352_RS13970	COG4774	siderophore transport
AM352_RS13980	COG0157	Belongs to the NadC ModD family
AM352_RS13990	COG1120	ATPase activity
AM352_RS13995	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS14000	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM352_RS14015	COG1461	Dihydroxyacetone kinase
AM352_RS14020	COG2376	Dihydroxyacetone kinase
AM352_RS14025	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM352_RS14065	COG0583	DNA-binding transcription factor activity
AM352_RS14070	COG0243	molybdopterin cofactor binding
AM352_RS14075	COG1271	oxidase subunit
AM352_RS14080	COG1294	oxidase, subunit
AM352_RS14095	COG3781	membrane
AM352_RS14105	COG0604	alcohol dehydrogenase
AM352_RS14105	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS14105	COG3321	synthase
AM352_RS14120	COG1609	Transcriptional regulator
AM352_RS14130	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS14145	COG4771	TonB-dependent receptor
AM352_RS14150	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM352_RS14170	COG3433	isochorismatase activity
AM352_RS14170	COG2226	methyltransferase
AM352_RS14170	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM352_RS14185	COG1132	(ABC) transporter
AM352_RS14190	COG2814	Major facilitator Superfamily
AM352_RS14195	COG1169	isochorismate synthase
AM352_RS14210	COG0012	GTP binding
AM352_RS14245	COG1120	ATPase activity
AM352_RS14250	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS14265	COG0659	secondary active sulfate transmembrane transporter activity
AM352_RS14295	COG2890	protein-(glutamine-N5) methyltransferase activity
AM352_RS14315	COG0387	Pfam Sodium calcium exchanger
AM352_RS14320	COG4572	Cation transport regulator
AM352_RS14325	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
AM352_RS14335	COG0840	transmembrane signaling receptor activity
AM352_RS14340	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
AM352_RS14345	COG3707	response regulator
AM352_RS14350	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM352_RS14355	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM352_RS14360	COG1116	anion transmembrane transporter activity
AM352_RS14365	COG2146	nitrite reductase [NAD(P)H] activity
AM352_RS14365	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
AM352_RS14370	COG0243	molybdopterin cofactor binding
AM352_RS14375	COG4932	domain protein
AM352_RS14380	COG2197	response regulator
AM352_RS14385	COG3850	Histidine kinase
AM352_RS14395	COG2223	nitrite transmembrane transporter activity
AM352_RS14400	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM352_RS14405	COG1140	nitrate reductase beta subunit
AM352_RS14410	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM352_RS14415	COG2181	nitrate reductase activity
AM352_RS14435	COG0788	formyltetrahydrofolate deformylase activity
AM352_RS14445	COG1752	Esterase of the alpha-beta hydrolase superfamily
AM352_RS14450	COG0745	RESPONSE REGULATOR receiver
AM352_RS14455	COG1210	Utp--glucose-1-phosphate uridylyltransferase
AM352_RS14465	COG1435	thymidine kinase activity
AM352_RS14470	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS14470	COG1454	alcohol dehydrogenase
AM352_RS14475	COG2095	MarC family integral membrane protein
AM352_RS14500	COG0444	Belongs to the ABC transporter superfamily
AM352_RS14505	COG4608	Belongs to the ABC transporter superfamily
AM352_RS14520	COG2350	Protein conserved in bacteria
AM352_RS14545	COG3047	cAMP biosynthetic process
AM352_RS14555	COG3706	GGDEF domain
AM352_RS14595	COG0009	L-threonylcarbamoyladenylate synthase
AM352_RS14600	COG1187	pseudouridine synthase activity
AM352_RS14610	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS14615	COG0616	signal peptide processing
AM352_RS14650	COG0671	phosphoesterase, PA-phosphatase related
AM352_RS14655	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
AM352_RS14660	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
AM352_RS14670	COG0023	Translation Initiation Factor
AM352_RS14680	COG1349	DNA-binding transcription factor activity
AM352_RS14695	COG5001	Diguanylate cyclase
AM352_RS14705	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM352_RS14705	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM352_RS14710	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
AM352_RS14725	COG3204	pilus organization
AM352_RS14760	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
AM352_RS14765	COG1842	Phage shock protein A
AM352_RS14775	COG1983	PspC domain protein
AM352_RS14785	COG3106	COG3106 Predicted ATPase
AM352_RS14805	COG4948	Mandelate Racemase Muconate Lactonizing
AM352_RS14810	COG2866	Carboxypeptidase
AM352_RS14815	COG4166	transmembrane transport
AM352_RS14820	COG0668	transmembrane transport
AM352_RS14825	COG3182	Iron-regulated membrane protein
AM352_RS14845	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
AM352_RS14850	COG2978	secondary active p-aminobenzoyl-glutamate transmembrane transporter activity
AM352_RS14855	COG2840	Smr protein MutS2
AM352_RS14860	COG3706	GGDEF domain
AM352_RS14875	COG0513	Belongs to the DEAD box helicase family
AM352_RS14895	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM352_RS14900	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
AM352_RS14900	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
AM352_RS14900	COG0674	pyruvate-flavodoxin oxidoreductase activity
AM352_RS14900	COG1013	pyruvate-flavodoxin oxidoreductase activity
AM352_RS14905	COG3042	response to heat
AM352_RS14910	COG3187	Heat shock protein
AM352_RS14915	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
AM352_RS14935	COG2911	Protein conserved in bacteria
AM352_RS14945	COG3784	Protein of unknown function (DUF1318)
AM352_RS14950	COG0667	Aldo Keto reductase
AM352_RS14960	COG1643	Atp-dependent helicase
AM352_RS14965	COG0583	DNA-binding transcription factor activity
AM352_RS14975	COG1538	Outer membrane efflux protein
AM352_RS14990	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM352_RS14995	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS15000	COG2755	lipolytic protein G-D-S-L family
AM352_RS15000	COG0657	acetylesterase activity
AM352_RS15005	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
AM352_RS15010	COG3038	cytochrome b561
AM352_RS15030	COG0840	transmembrane signaling receptor activity
AM352_RS15035	COG0583	DNA-binding transcription factor activity
AM352_RS15040	COG1227	inorganic diphosphatase activity
AM352_RS15045	COG5383	Protein conserved in bacteria
AM352_RS15050	COG2272	Belongs to the type-B carboxylesterase lipase family
AM352_RS15065	COG2841	Protein conserved in bacteria
AM352_RS15070	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM352_RS15075	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
AM352_RS15080	COG1275	C4-dicarboxylate transporter malic acid transport protein
AM352_RS15085	COG0500	methyltransferase
AM352_RS15095	COG0697	spore germination
AM352_RS15105	COG3135	benzoate transporter
AM352_RS15110	COG1396	sequence-specific DNA binding
AM352_RS15115	COG0826	peptidase U32
AM352_RS15120	COG1724	mRNA binding
AM352_RS15125	COG1598	PFAM Uncharacterised protein family UPF0150
AM352_RS15130	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM352_RS15165	COG0747	negative chemotaxis
AM352_RS15175	COG3238	Protein conserved in bacteria
AM352_RS15180	COG1247	-acetyltransferase
AM352_RS15190	COG2130	NADP-dependent
AM352_RS15195	COG4772	TonB-dependent receptor
AM352_RS15210	COG0625	glutathione transferase activity
AM352_RS15220	COG4251	negative regulation of phosphorylation
AM352_RS15220	COG3706	GGDEF domain
AM352_RS15220	COG2203	Gaf domain
AM352_RS15220	COG5001	Diguanylate cyclase
AM352_RS15225	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
AM352_RS15235	COG2162	N-hydroxyarylamine O-acetyltransferase activity
AM352_RS15240	COG2181	nitrate reductase activity
AM352_RS15245	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
AM352_RS15250	COG1140	nitrate reductase beta subunit
AM352_RS15255	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
AM352_RS15265	COG1309	transcriptional regulator
AM352_RS15295	COG0243	molybdopterin cofactor binding
AM352_RS15295	COG3383	formate dehydrogenase (NAD+) activity
AM352_RS15300	COG3383	formate dehydrogenase (NAD+) activity
AM352_RS15300	COG0243	molybdopterin cofactor binding
AM352_RS15305	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS15310	COG2864	formate dehydrogenase
AM352_RS15325	COG1764	response to oxidative stress
AM352_RS15330	COG4608	Belongs to the ABC transporter superfamily
AM352_RS15335	COG0444	Belongs to the ABC transporter superfamily
AM352_RS15340	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
AM352_RS15345	COG0601	transmembrane transport
AM352_RS15350	COG0747	negative chemotaxis
AM352_RS15355	COG2173	Catalyzes hydrolysis of the D-alanyl-D-alanine dipeptide
AM352_RS15365	COG0840	transmembrane signaling receptor activity
AM352_RS15380	COG1649	PFAM Uncharacterised BCR, COG1649
AM352_RS15385	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
AM352_RS15390	COG1193	negative regulation of DNA recombination
AM352_RS15395	COG0148	phosphopyruvate hydratase activity
AM352_RS15415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM352_RS15455	COG1012	belongs to the aldehyde dehydrogenase family
AM352_RS15460	COG0583	DNA-binding transcription factor activity
AM352_RS15465	COG0039	L-malate dehydrogenase activity
AM352_RS15480	COG1846	Transcriptional regulator
AM352_RS15495	COG0697	spore germination
AM352_RS15500	COG2814	Major facilitator Superfamily
AM352_RS15510	COG1129	ABC transporter
AM352_RS15530	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
AM352_RS15540	COG3706	GGDEF domain
AM352_RS15555	COG4221	oxidoreductase activity
AM352_RS15560	COG1802	Transcriptional regulator
AM352_RS15565	COG0246	Mannitol dehydrogenase
AM352_RS15570	COG0477	Major facilitator Superfamily
AM352_RS15575	COG1063	alcohol dehydrogenase
AM352_RS15580	COG4948	Mandelate Racemase Muconate Lactonizing
AM352_RS15595	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM352_RS15610	COG0243	molybdopterin cofactor binding
AM352_RS15615	COG0243	molybdopterin cofactor binding
AM352_RS15620	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS15625	COG3302	dmso reductase anchor subunit
AM352_RS15630	COG3381	protein complex oligomerization
AM352_RS15660	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM352_RS15665	COG1940	carbohydrate kinase activity
AM352_RS15670	COG0583	DNA-binding transcription factor activity
AM352_RS15675	COG2814	Major facilitator Superfamily
AM352_RS15685	COG2317	Broad specificity carboxypetidase that releases amino acids sequentially from the C-terminus, including neutral, aromatic, polar and basic residues
AM352_RS15695	COG3591	Belongs to the peptidase S1B family
AM352_RS15715	COG0628	permease
AM352_RS15720	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
AM352_RS15725	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
AM352_RS15740	COG0531	amino acid
AM352_RS15750	COG3136	membrane protein required for alginate biosynthesis
AM352_RS15755	COG0745	RESPONSE REGULATOR receiver
AM352_RS15760	COG2205	protein histidine kinase activity
AM352_RS15770	COG0114	fumarate hydratase activity
AM352_RS15775	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS15775	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS15785	COG5339	Protein conserved in bacteria
AM352_RS15790	COG1609	Transcriptional regulator
AM352_RS15795	COG1263	PTS System
AM352_RS15795	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS15800	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
AM352_RS15810	COG0673	inositol 2-dehydrogenase activity
AM352_RS15860	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
AM352_RS15870	COG0625	glutathione transferase activity
AM352_RS15875	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
AM352_RS15890	COG3895	Periplasmic Protein
AM352_RS15915	COG1566	PFAM secretion protein HlyD family protein
AM352_RS15920	COG1289	transmembrane transporter activity
AM352_RS15930	COG4989	oxidoreductase activity
AM352_RS15935	COG3313	Fe-S protein
AM352_RS15940	COG1309	transcriptional regulator
AM352_RS15945	COG1902	pentaerythritol trinitrate reductase activity
AM352_RS15950	COG0346	lactoylglutathione lyase activity
AM352_RS15960	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
AM352_RS15965	COG0791	NLP P60 protein
AM352_RS15975	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
AM352_RS15980	COG2814	Major facilitator Superfamily
AM352_RS16000	COG0583	DNA-binding transcription factor activity
AM352_RS16005	COG2814	Major facilitator Superfamily
AM352_RS16010	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
AM352_RS16015	COG0307	riboflavin synthase, alpha
AM352_RS16040	COG4771	TonB-dependent receptor
AM352_RS16045	COG2819	hydrolase of the alpha beta superfamily
AM352_RS16065	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS16075	COG0765	amino acid transport
AM352_RS16080	COG0765	amino acid transport
AM352_RS16090	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
AM352_RS16095	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS16105	COG2414	aldehyde ferredoxin oxidoreductase
AM352_RS16110	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS16120	COG1464	Belongs to the NlpA lipoprotein family
AM352_RS16125	COG2011	ABC-type metal ion transport system permease component
AM352_RS16140	COG0626	cystathionine gamma-synthase activity
AM352_RS16160	COG1376	ErfK ybiS ycfS ynhG family protein
AM352_RS16175	COG0719	Fe-S assembly protein
AM352_RS16180	COG0396	ATPase activity
AM352_RS16185	COG0719	Fe-S assembly protein
AM352_RS16190	COG0316	Belongs to the HesB IscA family
AM352_RS16210	COG2050	protein possibly involved in aromatic compounds catabolism
AM352_RS16215	COG0247	lactate metabolic process
AM352_RS16215	COG0277	FAD linked oxidase domain protein
AM352_RS16220	COG0628	permease
AM352_RS16230	COG0574	Belongs to the PEP-utilizing enzyme family
AM352_RS16230	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
AM352_RS16245	COG4256	Hemin uptake protein
AM352_RS16260	COG0791	NLP P60 protein
AM352_RS16270	COG0386	Belongs to the glutathione peroxidase family
AM352_RS16330	COG3137	Salt-induced outer membrane protein
AM352_RS16335	COG1105	Belongs to the carbohydrate kinase PfkB family
AM352_RS16345	COG3001	Fructosamine kinase
AM352_RS16355	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
AM352_RS16360	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS16365	COG1988	membrane-bound metal-dependent
AM352_RS16370	COG1823	symporter activity
AM352_RS16385	COG1486	melibiose metabolic process
AM352_RS16390	COG2169	Transcriptional regulator
AM352_RS16390	COG1917	Cupin 2, conserved barrel domain protein
AM352_RS16395	COG1447	Phosphotransferase system cellobiose-specific component IIA
AM352_RS16400	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM352_RS16405	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
AM352_RS16415	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
AM352_RS16435	COG3678	ATP-independent chaperone mediated protein folding
AM352_RS16465	COG0708	Exodeoxyribonuclease III
AM352_RS16475	COG4134	Bacterial extracellular solute-binding protein
AM352_RS16480	COG4135	transport system, permease component
AM352_RS16485	COG4136	ATPase activity
AM352_RS16490	COG2897	thiosulfate sulfurtransferase activity
AM352_RS16495	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
AM352_RS16500	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
AM352_RS16505	COG0494	nUDIX hydrolase
AM352_RS16520	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
AM352_RS16535	COG0778	Nitroreductase
AM352_RS16540	COG0616	signal peptide processing
AM352_RS16545	COG0252	asparaginase activity
AM352_RS16550	COG1335	isochorismatase
AM352_RS16555	COG3139	Protein of unknown function (DUF1315)
AM352_RS16580	COG3713	MltA-interacting MipA family protein
AM352_RS16585	COG2766	serine protein kinase
AM352_RS16595	COG2226	methyltransferase
AM352_RS16600	COG2199	diguanylate cyclase activity
AM352_RS16605	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM352_RS16615	COG2207	Transcriptional regulator
AM352_RS16620	COG2807	transmembrane transport
AM352_RS16625	COG0504	CTP synthase activity
AM352_RS16630	COG3189	MarR family transcriptional regulator
AM352_RS16635	COG3042	response to heat
AM352_RS16650	COG2261	transglycosylase associated protein
AM352_RS16655	COG3383	formate dehydrogenase (NAD+) activity
AM352_RS16670	COG3615	Tellurite resistance protein tehB
AM352_RS16680	COG3443	Belongs to the bacterial solute-binding protein 9 family
AM352_RS16685	COG0243	molybdopterin cofactor binding
AM352_RS16690	COG3005	denitrification pathway
AM352_RS16700	COG1560	Kdo2-lipid A biosynthetic process
AM352_RS16710	COG0538	isocitrate dehydrogenase activity
AM352_RS16715	COG1187	pseudouridine synthase activity
AM352_RS16735	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
AM352_RS16740	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
AM352_RS16755	COG0463	Glycosyl transferase, family 2
AM352_RS16800	COG1196	nuclear chromosome segregation
AM352_RS16910	COG3179	chitinase
AM352_RS16925	COG0071	Belongs to the small heat shock protein (HSP20) family
AM352_RS16930	COG0484	heat shock protein binding
AM352_RS17015	COG1846	Transcriptional regulator
AM352_RS17075	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
AM352_RS17095	COG0582	viral genome integration into host DNA
AM352_RS17110	COG2850	peptidyl-arginine hydroxylation
AM352_RS17130	COG1177	transmembrane transport
AM352_RS17140	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
AM352_RS17150	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM352_RS17155	COG1136	(ABC) transporter
AM352_RS17160	COG4591	ABC-type transport system involved in lipoprotein release permease component
AM352_RS17165	COG4763	Acyl-transferase
AM352_RS17170	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
AM352_RS17175	COG1388	LysM domain
AM352_RS17175	COG1376	ErfK ybiS ycfS ynhG family protein
AM352_RS17185	COG1309	transcriptional regulator
AM352_RS17190	COG3134	Outer membrane lipoprotein
AM352_RS17195	COG1252	NADH dehydrogenase
AM352_RS17220	COG5633	Lipoprotein
AM352_RS17225	COG0537	adenosine 5'-monophosphoramidase activity
AM352_RS17230	COG4773	Receptor
AM352_RS17240	COG0084	hydrolase, TatD family'
AM352_RS17245	COG0470	DNA polymerase III
AM352_RS17255	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
AM352_RS17260	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
AM352_RS17265	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
AM352_RS17280	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
AM352_RS17325	COG1530	ribonuclease E activity
AM352_RS17335	COG1256	bacterial-type flagellum assembly
AM352_RS17355	COG4786	Flagellar basal body rod
AM352_RS17360	COG4787	bacterial-type flagellum-dependent cell motility
AM352_RS17370	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
AM352_RS17375	COG1558	bacterial-type flagellum-dependent cell motility
AM352_RS17415	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
AM352_RS17425	COG2999	glutathione oxidoreductase activity
AM352_RS17460	COG3038	cytochrome b561
AM352_RS17465	COG2353	YceI-like domain
AM352_RS17475	COG1560	Kdo2-lipid A biosynthetic process
AM352_RS17490	COG5645	(Lipo)protein
AM352_RS17510	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM352_RS17570	COG3381	protein complex oligomerization
AM352_RS17605	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM352_RS17605	COG0506	proline dehydrogenase activity
AM352_RS17605	COG4230	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
AM352_RS17615	COG1309	transcriptional regulator
AM352_RS17620	COG3729	General stress protein
AM352_RS17650	COG0577	efflux transmembrane transporter activity
AM352_RS17650	COG1136	(ABC) transporter
AM352_RS17655	COG0577	efflux transmembrane transporter activity
AM352_RS17655	COG1136	(ABC) transporter
AM352_RS17660	COG0577	efflux transmembrane transporter activity
AM352_RS17660	COG1136	(ABC) transporter
AM352_RS17675	COG0672	)-iron permease
AM352_RS17685	COG2869	NQR complex catalyzes the reduction of ubiquinone-1 to ubiquinol by two successive reactions, coupled with the transport of Na( ) ions from the cytoplasm to the periplasm. NqrA to NqrE are probably involved in the second step, the conversion of ubisemiquinone to ubiquinol
AM352_RS17690	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
AM352_RS17695	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM352_RS17695	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AM352_RS17700	COG4232	protein-disulfide reductase activity
AM352_RS17720	COG3093	addiction module antidote protein HigA
AM352_RS17725	COG3549	Plasmid maintenance system killer
AM352_RS17730	COG0348	domain, Protein
AM352_RS17740	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM352_RS17755	COG2515	1-aminocyclopropane-1-carboxylate deaminase
AM352_RS17760	COG2055	Belongs to the LDH2 MDH2 oxidoreductase family
AM352_RS17770	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AM352_RS17825	COG0670	Belongs to the BI1 family
AM352_RS17830	COG2920	part of a sulfur-relay system
AM352_RS17850	COG1832	CoA-binding protein
AM352_RS17865	COG0210	DNA helicase
AM352_RS17870	COG3304	Inner membrane component domain
AM352_RS17875	COG1289	transmembrane transporter activity
AM352_RS17880	COG3070	regulator of competence-specific genes
AM352_RS17890	COG2885	chlorophyll binding
AM352_RS17890	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM352_RS17900	COG1067	ATP-dependent peptidase activity
AM352_RS17910	COG3130	regulation of translation
AM352_RS17920	COG3009	Protein conserved in bacteria
AM352_RS17925	COG3008	intermembrane lipid transfer
AM352_RS17925	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
AM352_RS17930	COG2995	paraquat-inducible protein a
AM352_RS17935	COG0488	(ABC) transporter
AM352_RS17945	COG0633	Ferredoxin
AM352_RS17945	COG3217	Mosc domain protein beta barrel domain protein
AM352_RS17965	COG0431	NADPH-dependent FMN reductase
AM352_RS17970	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
AM352_RS17980	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM352_RS17990	COG0308	aminopeptidase N
AM352_RS18015	COG1448	Aminotransferase
AM352_RS18020	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
AM352_RS18025	COG3108	Peptidase M15
AM352_RS18035	COG2989	Protein conserved in bacteria
AM352_RS18045	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
AM352_RS18055	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
AM352_RS18065	COG1434	Gram-negative-bacterium-type cell wall biogenesis
AM352_RS18070	COG3173	Aminoglycoside phosphotransferase
AM352_RS18085	COG3214	Protein conserved in bacteria
AM352_RS18100	COG2333	competence protein COMEC
AM352_RS18100	COG0658	competence protein
AM352_RS18110	COG0539	negative regulation of cytoplasmic translation
AM352_RS18135	COG1944	ATP diphosphatase activity
AM352_RS18140	COG2116	formate transmembrane transporter activity
AM352_RS18145	COG1882	Formate acetyltransferase
AM352_RS18150	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM352_RS18160	COG1335	isochorismatase
AM352_RS18165	COG3302	dmso reductase anchor subunit
AM352_RS18170	COG0437	4 iron, 4 sulfur cluster binding
AM352_RS18175	COG0243	molybdopterin cofactor binding
AM352_RS18185	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
AM352_RS18210	COG0492	ferredoxin-NADP+ reductase activity
AM352_RS18215	COG4988	ABC transporter
AM352_RS18220	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
AM352_RS18240	COG0583	DNA-binding transcription factor activity
AM352_RS18250	COG1335	isochorismatase
AM352_RS18265	COG0542	response to heat
AM352_RS18275	COG1278	Cold shock
AM352_RS18285	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS18290	COG3593	DNA synthesis involved in DNA repair
AM352_RS18300	COG2431	L-lysine efflux transmembrane transporter activity
AM352_RS18310	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
AM352_RS18320	COG0028	Belongs to the TPP enzyme family
AM352_RS18325	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
AM352_RS18330	COG0702	epimerase
AM352_RS18335	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
AM352_RS18340	COG3397	chitin binding
AM352_RS18355	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
AM352_RS18365	COG3297	Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins
AM352_RS18380	COG2165	general secretion pathway protein
AM352_RS18390	COG2165	general secretion pathway protein
AM352_RS18400	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM352_RS18405	COG1450	Type ii and iii secretion system protein
AM352_RS18430	COG3023	N-Acetylmuramoyl-L-alanine amidase
AM352_RS18445	COG1126	abc transporter atp-binding protein
AM352_RS18450	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS18455	COG4215	(ABC) transporter
AM352_RS18460	COG4160	amino acid transport
AM352_RS18465	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS18470	COG5002	protein histidine kinase activity
AM352_RS18475	COG0745	RESPONSE REGULATOR receiver
AM352_RS18490	COG1177	transmembrane transport
AM352_RS18495	COG1176	ABC-type spermidine putrescine transport system, permease component I
AM352_RS18500	COG3842	ATPase activity
AM352_RS18505	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
AM352_RS18550	COG3226	Transcriptional regulator
AM352_RS18555	COG0738	Major facilitator superfamily
AM352_RS18560	COG0561	phosphatase activity
AM352_RS18565	COG2814	Major facilitator Superfamily
AM352_RS18570	COG0671	phosphoesterase, PA-phosphatase related
AM352_RS18575	COG1349	DNA-binding transcription factor activity
AM352_RS18580	COG1686	Belongs to the peptidase S11 family
AM352_RS18585	COG0625	glutathione transferase activity
AM352_RS18590	COG2133	pyrroloquinoline quinone binding
AM352_RS18615	COG0747	negative chemotaxis
AM352_RS18640	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
AM352_RS18645	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
AM352_RS18650	COG1882	Formate acetyltransferase
AM352_RS18655	COG3157	Type VI secretion system effector, Hcp
AM352_RS18670	COG0561	phosphatase activity
AM352_RS18680	COG1609	Transcriptional regulator
AM352_RS18685	COG2271	Major facilitator Superfamily
AM352_RS18700	COG0488	(ABC) transporter
AM352_RS18705	COG1376	ErfK ybiS ycfS ynhG family protein
AM352_RS18710	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
AM352_RS18715	COG1321	iron dependent repressor
AM352_RS18725	COG2194	sulfuric ester hydrolase activity
AM352_RS18730	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
AM352_RS18745	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
AM352_RS18750	COG0765	amino acid transport
AM352_RS18755	COG1126	abc transporter atp-binding protein
AM352_RS18760	COG0668	transmembrane transport
AM352_RS18775	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
AM352_RS18785	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
AM352_RS18795	COG3121	Chaperone
AM352_RS18820	COG0513	Belongs to the DEAD box helicase family
AM352_RS18825	COG1309	transcriptional regulator
AM352_RS18835	COG1131	(ABC) transporter
AM352_RS18840	COG0842	Transport permease protein
AM352_RS18845	COG0842	Transport permease protein
AM352_RS18855	COG3568	Endonuclease Exonuclease Phosphatase
AM352_RS18860	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
AM352_RS18865	COG0392	lysyltransferase activity
AM352_RS18870	COG0670	Belongs to the BI1 family
AM352_RS18875	COG0314	molybdopterin synthase activity
AM352_RS18880	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
AM352_RS18890	COG0521	Mo-molybdopterin cofactor biosynthetic process
AM352_RS18915	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
AM352_RS18940	COG1881	PFAM PEBP family protein
AM352_RS18970	COG4677	pectinesterase activity
AM352_RS18975	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
AM352_RS18980	COG0471	metal ion transport
AM352_RS18985	COG2828	Protein conserved in bacteria
AM352_RS18990	COG0583	DNA-binding transcription factor activity
AM352_RS19000	COG0561	phosphatase activity
AM352_RS19010	COG4149	molybdate abc transporter
AM352_RS19015	COG0725	ABC transporter, periplasmic molybdate-binding protein
AM352_RS19025	COG2005	Transcriptional regulator
AM352_RS19025	COG3585	molybdate ion transport
AM352_RS19030	COG1119	ATPase activity
AM352_RS19035	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
AM352_RS19050	COG2017	converts alpha-aldose to the beta-anomer
AM352_RS19060	COG1120	ATPase activity
AM352_RS19065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS19080	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
AM352_RS19095	COG1230	cation diffusion facilitator family transporter
AM352_RS19100	COG3201	nicotinamide mononucleotide transporter
AM352_RS19135	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
AM352_RS19140	COG2885	chlorophyll binding
AM352_RS19150	COG3064	Membrane
AM352_RS19155	COG0848	biopolymer transport protein
AM352_RS19160	COG0811	peptide transport
AM352_RS19165	COG0824	Thioesterase
AM352_RS19170	COG3790	cyd operon protein YbgE
AM352_RS19175	COG4890	Cyd operon protein YbgT
AM352_RS19180	COG1294	oxidase, subunit
AM352_RS19185	COG1271	oxidase subunit
AM352_RS19190	COG0383	alpha-mannosidase activity
AM352_RS19195	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS19195	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS19195	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
AM352_RS19200	COG2188	Transcriptional regulator
AM352_RS19205	COG2185	Catalyzes the reversible interconversion of isobutyryl- CoA and n-butyryl-CoA, using radical chemistry. Also exhibits GTPase activity, associated with its G-protein domain (MeaI) that functions as a chaperone that assists cofactor delivery and proper holo-enzyme assembly
AM352_RS19215	COG4865	methylaspartate mutase activity
AM352_RS19220	COG3799	methylaspartate ammonia-lyase activity
AM352_RS19235	COG1301	dicarboxylic acid transport
AM352_RS19240	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS19240	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
AM352_RS19250	COG0583	DNA-binding transcription factor activity
AM352_RS19260	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
AM352_RS19270	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM352_RS19275	COG0567	Dehydrogenase, E1 component
AM352_RS19285	COG1053	succinate dehydrogenase
AM352_RS19290	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
AM352_RS19295	COG2009	succinate dehydrogenase
AM352_RS19310	COG3157	Type VI secretion system effector, Hcp
AM352_RS19325	COG4316	Uncharacterized protein conserved in bacteria (DUF2251)
AM352_RS19330	COG3180	Ammonia monooxygenase
AM352_RS19345	COG2211	Major facilitator Superfamily
AM352_RS19355	COG4977	sequence-specific DNA binding
AM352_RS19355	COG1917	Cupin 2, conserved barrel domain protein
AM352_RS19385	COG1984	allophanate hydrolase subunit 2
AM352_RS19390	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
AM352_RS19395	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
AM352_RS19435	COG2205	protein histidine kinase activity
AM352_RS19440	COG0745	RESPONSE REGULATOR receiver
AM352_RS19450	COG1982	Orn Lys Arg decarboxylase major
AM352_RS19455	COG0531	amino acid
AM352_RS19460	COG0033	Phosphoglucomutase
AM352_RS19465	COG3057	Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated
AM352_RS19470	COG0596	Alpha beta hydrolase
AM352_RS19490	COG0735	belongs to the Fur family
AM352_RS19515	COG2190	(PTS) system
AM352_RS19515	COG1263	PTS System
AM352_RS19515	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS19525	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM352_RS19530	COG1940	carbohydrate kinase activity
AM352_RS19530	COG1846	Transcriptional regulator
AM352_RS19535	COG0647	UMP catabolic process
AM352_RS19540	COG0367	asparagine synthase
AM352_RS19580	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
AM352_RS19590	COG1702	phosphate starvation-inducible protein PhoH
AM352_RS19600	COG4535	Mg2 and Co2 transporter CorC
AM352_RS19615	COG0765	amino acid transport
AM352_RS19620	COG0765	amino acid transport
AM352_RS19625	COG1126	abc transporter atp-binding protein
AM352_RS19635	COG2888	peptidyl-tyrosine sulfation
AM352_RS19650	COG1466	dna polymerase III delta subunit
AM352_RS19660	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
AM352_RS19670	COG0799	negative regulation of ribosome biogenesis
AM352_RS19680	COG0768	penicillin binding
AM352_RS19685	COG0772	Belongs to the SEDS family
AM352_RS19690	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
AM352_RS19695	COG1686	Belongs to the peptidase S11 family
AM352_RS19710	COG0583	DNA-binding transcription factor activity
AM352_RS19725	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM352_RS19745	COG3069	C4-dicarboxylate transmembrane transporter activity
AM352_RS19750	COG4565	transcriptional regulatory protein
AM352_RS19755	COG3290	protein histidine kinase activity
AM352_RS19760	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
AM352_RS19770	COG2301	Belongs to the HpcH HpaI aldolase family
AM352_RS19775	COG3051	citrate lyase alpha subunit
AM352_RS19790	COG0471	metal ion transport
AM352_RS19795	COG3719	Belongs to the RNase T2 family
AM352_RS19800	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
AM352_RS19815	COG3634	alkyl hydroperoxide reductase activity
AM352_RS19825	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM352_RS19830	COG0583	DNA-binding transcription factor activity
AM352_RS19835	COG3969	phosphoadenosine phosphosulfate
AM352_RS19840	COG1475	DNA binding
AM352_RS19845	COG0436	Aminotransferase
AM352_RS19850	COG0371	Dehydrogenase
AM352_RS19855	COG2879	small protein
AM352_RS19860	COG1966	Carbon starvation protein
AM352_RS19870	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS19875	COG3433	isochorismatase activity
AM352_RS19875	COG1535	isochorismatase
AM352_RS19880	COG1021	2,3-dihydroxybenzoate-AMP ligase
AM352_RS19885	COG1169	isochorismate synthase
AM352_RS19890	COG4592	Periplasmic binding protein
AM352_RS19900	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS19905	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS19910	COG1120	ATPase activity
AM352_RS19915	COG3765	Modulates the polysaccharide chain length of enterobacterial common antigen (ECA)
AM352_RS19920	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
AM352_RS19920	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
AM352_RS19925	COG3251	PFAM MbtH domain protein
AM352_RS19930	COG2382	esterase
AM352_RS19935	COG4771	TonB-dependent receptor
AM352_RS19940	COG2977	Belongs to the P-Pant transferase superfamily
AM352_RS19945	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM352_RS19985	COG4774	siderophore transport
AM352_RS20065	COG1172	Belongs to the binding-protein-dependent transport system permease family
AM352_RS20070	COG1129	ABC transporter
AM352_RS20080	COG1609	Transcriptional regulator
AM352_RS20140	COG0789	Transcriptional regulator
AM352_RS20230	COG1528	Iron-storage protein
AM352_RS20355	COG1737	Transcriptional regulator
AM352_RS20360	COG2190	(PTS) system
AM352_RS20360	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
AM352_RS20360	COG1263	PTS System
AM352_RS20365	COG0698	ribose 5-phosphate isomerase
AM352_RS20370	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM352_RS20380	COG3039	Transposase
AM352_RS20470	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
AM352_RS20480	COG3039	Transposase
AM352_RS20495	COG1609	Transcriptional regulator
AM352_RS20500	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS20510	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
AM352_RS20525	COG3436	PFAM IS66 Orf2 family protein
AM352_RS20530	COG2433	Pfam Transposase IS66
AM352_RS20540	COG0840	transmembrane signaling receptor activity
AM352_RS20590	COG3039	Transposase
AM352_RS20600	COG3039	Transposase
AM352_RS20640	COG0589	response to stress
AM352_RS20645	COG0659	secondary active sulfate transmembrane transporter activity
AM352_RS20680	COG3366	ferrous iron transmembrane transporter activity
AM352_RS20685	COG0700	Nucleoside recognition
AM352_RS20690	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
AM352_RS20705	COG2963	transposase activity
AM352_RS20715	COG4372	Transposase
AM352_RS20720	COG3436	PFAM IS66 Orf2 family protein
AM352_RS20730	COG0840	transmembrane signaling receptor activity
AM352_RS20755	COG3436	PFAM IS66 Orf2 family protein
AM352_RS20795	COG3039	Transposase
AM352_RS20800	COG1309	transcriptional regulator
AM352_RS20805	COG3250	beta-galactosidase activity
AM352_RS20825	COG0246	Mannitol dehydrogenase
AM352_RS20835	COG2186	Transcriptional regulator
AM352_RS20895	COG1695	Transcriptional regulator
AM352_RS20930	COG3173	Aminoglycoside phosphotransferase
AM352_RS20950	COG1660	Displays ATPase and GTPase activities
AM352_RS20990	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
AM352_RS21020	COG0697	spore germination
AM352_RS21070	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
AM352_RS21120	COG2315	Protein conserved in bacteria
AM352_RS21140	COG0477	Major facilitator Superfamily
AM352_RS21145	COG0668	transmembrane transport
AM352_RS21150	COG1609	Transcriptional regulator
AM352_RS21165	COG2211	Major facilitator Superfamily
AM352_RS21170	COG1113	amino acid transport
AM352_RS21190	COG3696	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM352_RS21195	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS21200	COG5569	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS21205	COG1538	Outer membrane efflux protein
AM352_RS21210	COG0745	RESPONSE REGULATOR receiver
AM352_RS21215	COG5002	protein histidine kinase activity
AM352_RS21285	COG2501	S4 domain
AM352_RS21295	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
AM352_RS21310	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
AM352_RS21315	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
AM352_RS21325	COG2011	ABC-type metal ion transport system permease component
AM352_RS21335	COG1464	Belongs to the NlpA lipoprotein family
AM352_RS21345	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
AM352_RS21350	COG4181	ATPase activity
AM352_RS21355	COG2755	lipolytic protein G-D-S-L family
AM352_RS21360	COG0300	oxidoreductase activity
AM352_RS21365	COG3118	belongs to the thioredoxin family
AM352_RS21370	COG0390	transport system, permease component
AM352_RS21375	COG4619	ABC transporter
AM352_RS21380	COG0330	HflC and HflK could
AM352_RS21385	COG1585	Membrane protein implicated in regulation of membrane protease activity
AM352_RS21395	COG4771	TonB-dependent receptor
AM352_RS21400	COG4558	Periplasmic binding protein
AM352_RS21410	COG3721	Heme iron utilization protein
AM352_RS21420	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS21430	COG0477	Major facilitator Superfamily
AM352_RS21435	COG1609	Transcriptional regulator
AM352_RS21445	COG1285	pathogenesis
AM352_RS21450	COG2217	Heavy metal translocating P-type atpase
AM352_RS21455	COG3735	TraB family
AM352_RS21460	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
AM352_RS21470	COG2223	nitrite transmembrane transporter activity
AM352_RS21475	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
AM352_RS21475	COG4651	solute:proton antiporter activity
AM352_RS21485	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
AM352_RS21540	COG2832	Protein of unknown function (DUF454)
AM352_RS21545	COG3923	Primosomal replication protein n
AM352_RS21555	COG5464	transposase or invertase
AM352_RS21560	COG1196	nuclear chromosome segregation
AM352_RS21560	COG3264	Mechanosensitive ion channel
AM352_RS21565	COG1309	transcriptional regulator
AM352_RS21570	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS21575	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
AM352_RS21590	COG0110	maltose O-acetyltransferase activity
AM352_RS21600	COG0257	Belongs to the bacterial ribosomal protein bL36 family
AM352_RS21610	COG4943	cyclic-guanylate-specific phosphodiesterase activity
AM352_RS21615	COG5507	3-demethylubiquinone-9 3-methyltransferase
AM352_RS21620	COG2364	Membrane
AM352_RS21625	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
AM352_RS21645	COG3695	enzyme binding
AM352_RS21650	COG3126	Type III secretion system lipoprotein chaperone (YscW)
AM352_RS21655	COG1946	Acyl-CoA thioesterase
AM352_RS21660	COG0004	ammonium transporteR
AM352_RS21665	COG0347	Belongs to the P(II) protein family
AM352_RS21675	COG1132	(ABC) transporter
AM352_RS21680	COG1132	(ABC) transporter
AM352_RS21685	COG1522	sequence-specific DNA binding
AM352_RS21700	COG4533	DNA binding
AM352_RS21710	COG0824	Thioesterase
AM352_RS21715	COG1555	photosystem II stabilization
AM352_RS21720	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
AM352_RS21725	COG0776	regulation of translation
AM352_RS21730	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
AM352_RS21755	COG0271	Belongs to the BolA IbaG family
AM352_RS21765	COG3056	Lipoprotein
AM352_RS21770	COG2223	nitrite transmembrane transporter activity
AM352_RS21775	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
AM352_RS21780	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
AM352_RS21785	COG1845	cytochrome c oxidase, subunit III
AM352_RS21790	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
AM352_RS21800	COG2814	Major facilitator Superfamily
AM352_RS21830	COG0142	geranyltranstransferase activity
AM352_RS21840	COG0667	Aldo Keto reductase
AM352_RS21845	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
AM352_RS21850	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
AM352_RS21865	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM352_RS21865	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
AM352_RS21875	COG4238	major outer membrane lipoprotein
AM352_RS21880	COG3248	Nucleoside-binding outer membrane protein
AM352_RS21890	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM352_RS21895	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
AM352_RS21900	COG1862	Preprotein translocase
AM352_RS21920	COG0450	alkyl hydroperoxide reductase
AM352_RS21935	COG0583	DNA-binding transcription factor activity
AM352_RS21940	COG0366	Alpha amylase catalytic
AM352_RS21955	COG5002	protein histidine kinase activity
AM352_RS21965	COG0420	3'-5' exonuclease activity
AM352_RS21970	COG0419	ATPase involved in DNA repair
AM352_RS21975	COG1940	carbohydrate kinase activity
AM352_RS21990	COG4126	flavin adenine dinucleotide binding
AM352_RS22010	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
AM352_RS22015	COG3706	GGDEF domain
AM352_RS22025	COG1785	Belongs to the alkaline phosphatase family
AM352_RS22035	COG1609	Transcriptional regulator
AM352_RS22040	COG2271	Major facilitator Superfamily
AM352_RS22045	COG1028	Short-chain dehydrogenase reductase Sdr
AM352_RS22080	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
AM352_RS22085	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
AM352_RS22090	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
AM352_RS22100	COG0113	porphobilinogen synthase activity
AM352_RS22110	COG2175	clavaminate synthase activity
AM352_RS22115	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
AM352_RS22120	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
AM352_RS22125	COG4521	taurine ABC transporter
AM352_RS22140	COG2271	Major facilitator Superfamily
AM352_RS22145	COG1840	ABC-type Fe3 transport system, periplasmic component
AM352_RS22155	COG3842	ATPase activity
AM352_RS22160	COG2040	homocysteine
AM352_RS22165	COG1609	Transcriptional regulator
AM352_RS22195	COG3829	transcription factor binding
AM352_RS22205	COG1280	lysine exporter protein (LysE YggA)
AM352_RS22210	COG2814	Major facilitator Superfamily
AM352_RS22225	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
AM352_RS22235	COG1737	Transcriptional regulator
AM352_RS22245	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS22250	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
AM352_RS22255	COG1120	ATPase activity
AM352_RS22260	COG4774	siderophore transport
AM352_RS22275	COG0814	amino acid
AM352_RS22290	COG0791	NLP P60 protein
AM352_RS22300	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
AM352_RS22305	COG1191	sigma factor activity
AM352_RS22330	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
AM352_RS22335	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM352_RS22340	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
AM352_RS22365	COG4786	Flagellar basal body rod
AM352_RS22365	COG1256	bacterial-type flagellum assembly
AM352_RS22375	COG1706	bacterial-type flagellum-dependent cell motility
AM352_RS22385	COG4786	Flagellar basal body rod
AM352_RS22405	COG1558	bacterial-type flagellum-dependent cell motility
AM352_RS22410	COG1815	bacterial-type flagellum-dependent cell motility
AM352_RS22430	COG2226	methyltransferase
AM352_RS22435	COG1216	Glycosyl transferase, family 2
AM352_RS22435	COG1442	glycosyl transferase family 8
AM352_RS22470	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
AM352_RS22505	COG1987	bacterial-type flagellum assembly
AM352_RS22510	COG1684	flagellar biosynthetic protein fliR
AM352_RS22535	COG2200	EAL domain
AM352_RS22560	COG2207	Transcriptional regulator
AM352_RS22580	COG3188	usher protein
AM352_RS22610	COG1732	Glycine betaine
AM352_RS22615	COG2986	histidine ammonia-lyase
AM352_RS22660	COG0411	ABC transporter
AM352_RS22815	COG0582	viral genome integration into host DNA
AM352_RS22835	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
AM352_RS22855	COG2195	Cleaves the N-terminal amino acid of tripeptides
AM352_RS22865	COG3034	peptidoglycan biosynthetic process
AM352_RS22870	COG0121	glutamine amidotransferase
AM352_RS22880	COG1960	acyl-CoA dehydrogenase activity
AM352_RS22885	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
AM352_RS22905	COG2226	methyltransferase
AM352_RS22915	COG0741	lytic transglycosylase activity
AM352_RS22915	COG1388	LysM domain
AM352_RS22920	COG2226	methyltransferase
AM352_RS22930	COG0583	DNA-binding transcription factor activity
AM352_RS22965	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
AM352_RS22980	COG1464	Belongs to the NlpA lipoprotein family
AM352_RS22990	COG1720	tRNA m6t6A37 methyltransferase activity
AM352_RS23000	COG3015	lipoprotein NlpE involved in copper resistance
AM352_RS23005	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
AM352_RS23020	COG4568	rho-dependent transcription termination
AM352_RS23030	COG0346	lactoylglutathione lyase activity
AM352_RS23035	COG1982	Orn Lys Arg decarboxylase major
AM352_RS23075	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
AM352_RS23090	COG0575	Belongs to the CDS family
AM352_RS23100	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
AM352_RS23150	COG3835	regulator
AM352_RS23155	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
AM352_RS23180	COG2860	membrane
AM352_RS23205	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
AM352_RS23210	COG1120	ATPase activity
AM352_RS23215	COG4774	siderophore transport
AM352_RS23220	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
AM352_RS23225	COG1643	Atp-dependent helicase
AM352_RS23230	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
AM352_RS23250	COG0617	tRNA 3'-terminal CCA addition
AM352_RS23255	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
AM352_RS23280	COG3121	Chaperone
AM352_RS23285	COG3188	usher protein
AM352_RS23310	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
AM352_RS23315	COG0842	Transport permease protein
AM352_RS23320	COG1131	(ABC) transporter
AM352_RS23325	COG0288	reversible hydration of carbon dioxide
AM352_RS23330	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
AM352_RS23335	COG4993	Dehydrogenase
AM352_RS23340	COG2132	Multicopper oxidase
AM352_RS23375	COG3064	Membrane
AM352_RS23385	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
AM352_RS23390	COG0508	dehydrogenase complex catalyzes the overall conversion of
AM352_RS23395	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
AM352_RS23405	COG1113	amino acid transport
AM352_RS23410	COG2211	Major facilitator Superfamily
AM352_RS23415	COG3940	Belongs to the glycosyl hydrolase 43 family
AM352_RS23420	COG3725	Membrane protein required for beta-lactamase induction
AM352_RS23435	COG4969	Belongs to the N-Me-Phe pilin family
AM352_RS23440	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
AM352_RS23445	COG1459	type II secretion system
AM352_RS23470	COG0494	nUDIX hydrolase
AM352_RS23490	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
AM352_RS23495	COG0849	cell division
AM352_RS23505	COG1181	Belongs to the D-alanine--D-alanine ligase family
AM352_RS23520	COG0772	Belongs to the SEDS family
AM352_RS23535	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
AM352_RS23560	COG2135	peptidase activity
AM352_RS23645	COG2433	Pfam Transposase IS66
AM352_RS23650	COG3436	PFAM IS66 Orf2 family protein
AM352_RS23860	COG3004	Na( ) H( ) antiporter that extrudes sodium in exchange for external protons
AM352_RS23860	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
AM352_RS23950	COG2963	transposase activity
AM352_RS23955	COG2826	transposase and inactivated derivatives, IS30 family
AM352_RS23965	COG3436	PFAM IS66 Orf2 family protein
AM352_RS23970	COG2433	Pfam Transposase IS66
AM352_RS24005	COG1121	(ABC) transporter
AM352_RS24110	COG0741	lytic transglycosylase activity
AM352_RS24190	COG4683	PFAM Phage derived protein Gp49-like (DUF891)