locus-tag	class	description
ROD_RS00015	COG0460	homoserine dehydrogenase
ROD_RS00015	COG0527	aspartate kinase activity
ROD_RS00025	COG0498	Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine
ROD_RS00035	COG1115	amino acid carrier protein
ROD_RS00045	COG0521	Mo-molybdopterin cofactor biosynthetic process
ROD_RS00050	COG0477	Major facilitator Superfamily
ROD_RS00055	COG1584	GPR1 FUN34 yaaH family protein
ROD_RS00100	COG0583	DNA-binding transcription factor activity
ROD_RS00125	COG0196	riboflavin kinase activity
ROD_RS00135	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
ROD_RS00140	COG1047	Peptidyl-prolyl cis-trans
ROD_RS00155	COG3716	PTS system mannose fructose sorbose family IID component
ROD_RS00160	COG3715	PTS system
ROD_RS00165	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS00180	COG1609	Transcriptional regulator
ROD_RS00190	COG0505	Belongs to the CarA family
ROD_RS00245	COG0644	oxidoreductase
ROD_RS00250	COG2440	electron transfer flavoprotein-ubiquinone oxidoreductase
ROD_RS00255	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS00260	COG2271	Major facilitator Superfamily
ROD_RS00310	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ROD_RS00315	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ROD_RS00320	COG1076	Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward HscA
ROD_RS00325	COG0564	pseudouridine synthase activity
ROD_RS00335	COG0417	DNA replication proofreading
ROD_RS00345	COG0235	Class ii aldolase
ROD_RS00360	COG4977	sequence-specific DNA binding
ROD_RS00365	COG0586	Pfam SNARE associated Golgi protein
ROD_RS00375	COG1178	ABC-type Fe3 transport system permease component
ROD_RS00380	COG4143	(ABC) transporter
ROD_RS00395	COG2814	Major facilitator Superfamily
ROD_RS00430	COG0028	Belongs to the TPP enzyme family
ROD_RS00440	COG1609	Transcriptional regulator
ROD_RS00460	COG0768	penicillin binding
ROD_RS00470	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
ROD_RS00485	COG0772	Belongs to the SEDS family
ROD_RS00500	COG1181	Belongs to the D-alanine--D-alanine ligase family
ROD_RS00510	COG0849	cell division
ROD_RS00515	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
ROD_RS00535	COG0494	nUDIX hydrolase
ROD_RS00550	COG0237	dephospho-CoA kinase activity
ROD_RS00560	COG1459	type II secretion system
ROD_RS00565	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ROD_RS00570	COG4969	Belongs to the N-Me-Phe pilin family
ROD_RS00585	COG3725	Membrane protein required for beta-lactamase induction
ROD_RS00590	COG3940	Belongs to the glycosyl hydrolase 43 family
ROD_RS00595	COG2211	Major facilitator Superfamily
ROD_RS00600	COG1113	amino acid transport
ROD_RS00605	COG2186	Transcriptional regulator
ROD_RS00610	COG2609	component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2)
ROD_RS00615	COG0508	dehydrogenase complex catalyzes the overall conversion of
ROD_RS00620	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ROD_RS00630	COG3064	Membrane
ROD_RS00680	COG2132	Multicopper oxidase
ROD_RS00690	COG4993	Dehydrogenase
ROD_RS00695	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
ROD_RS00700	COG0288	reversible hydration of carbon dioxide
ROD_RS00705	COG1131	(ABC) transporter
ROD_RS00710	COG0842	Transport permease protein
ROD_RS00715	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS00720	COG0726	polysaccharide deacetylase
ROD_RS00725	COG0853	Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine
ROD_RS00730	COG0414	Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate
ROD_RS00740	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
ROD_RS00745	COG0617	tRNA 3'-terminal CCA addition
ROD_RS00765	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
ROD_RS00770	COG1643	Atp-dependent helicase
ROD_RS00775	COG0744	Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors
ROD_RS00780	COG4774	siderophore transport
ROD_RS00785	COG1120	ATPase activity
ROD_RS00790	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ROD_RS00815	COG2860	membrane
ROD_RS00835	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ROD_RS00840	COG3835	regulator
ROD_RS00890	COG0743	1-deoxy-D-xylulose-5-phosphate reductoisomerase activity
ROD_RS00900	COG0575	Belongs to the CDS family
ROD_RS00915	COG2825	PFAM Outer membrane chaperone Skp (OmpH)
ROD_RS00920	COG1044	Catalyzes the N-acylation of UDP-3-O-acylglucosamine using 3-hydroxyacyl-ACP as the acyl donor. Is involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
ROD_RS00965	COG3436	PFAM IS66 Orf2 family protein
ROD_RS00970	COG4372	Transposase
ROD_RS00980	COG1982	Orn Lys Arg decarboxylase major
ROD_RS00985	COG0346	lactoylglutathione lyase activity
ROD_RS00995	COG4568	rho-dependent transcription termination
ROD_RS01010	COG1186	Peptide chain release factor 2 directs the termination of translation in response to the peptide chain termination codons UGA and UAA
ROD_RS01015	COG3015	lipoprotein NlpE involved in copper resistance
ROD_RS01040	COG1720	tRNA m6t6A37 methyltransferase activity
ROD_RS01050	COG1464	Belongs to the NlpA lipoprotein family
ROD_RS01055	COG2011	ABC-type metal ion transport system permease component
ROD_RS01065	COG0241	D,D-heptose 1,7-bisphosphate phosphatase
ROD_RS01110	COG0583	DNA-binding transcription factor activity
ROD_RS01120	COG2226	methyltransferase
ROD_RS01125	COG1388	LysM domain
ROD_RS01125	COG0741	lytic transglycosylase activity
ROD_RS01135	COG2226	methyltransferase
ROD_RS01145	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ROD_RS01160	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ROD_RS01175	COG0121	glutamine amidotransferase
ROD_RS01180	COG3034	peptidoglycan biosynthetic process
ROD_RS01185	COG0791	NLP P60 protein
ROD_RS01210	COG1987	bacterial-type flagellum assembly
ROD_RS01235	COG1677	Flagellar hook-basal body complex protein FliE
ROD_RS01245	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ROD_RS01255	COG5301	cellulose 1,4-beta-cellobiosidase activity
ROD_RS01260	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ROD_RS01265	COG5301	cellulose 1,4-beta-cellobiosidase activity
ROD_RS01340	COG4397	Mu-like prophage major head subunit gpT
ROD_RS01360	COG2369	cell adhesion
ROD_RS01365	COG4383	Mu-like prophage protein gp29
ROD_RS01505	COG2842	Transposition protein
ROD_RS01535	COG0615	ADP-L-glycero-beta-D-manno-heptose biosynthetic process
ROD_RS01575	COG1558	bacterial-type flagellum-dependent cell motility
ROD_RS01585	COG1749	Flagellar hook protein flgE
ROD_RS01615	COG1256	bacterial-type flagellum assembly
ROD_RS01615	COG4786	Flagellar basal body rod
ROD_RS01640	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
ROD_RS01670	COG1191	sigma factor activity
ROD_RS01675	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
ROD_RS01695	COG2195	Cleaves the N-terminal amino acid of tripeptides
ROD_RS01715	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ROD_RS01765	COG0577	efflux transmembrane transporter activity
ROD_RS01765	COG1136	(ABC) transporter
ROD_RS01775	COG0477	Major facilitator Superfamily
ROD_RS01785	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ROD_RS01790	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ROD_RS01795	COG0531	amino acid
ROD_RS01800	COG0174	glutamine synthetase
ROD_RS01805	COG2071	gamma-glutamyl-gamma-aminobutyrate hydrolase activity
ROD_RS01810	COG1917	Cupin 2, conserved barrel domain protein
ROD_RS01810	COG1396	sequence-specific DNA binding
ROD_RS01815	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS01820	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
ROD_RS01850	COG3121	Chaperone
ROD_RS01895	COG2390	Transcriptional regulator
ROD_RS01900	COG2376	Dihydroxyacetone kinase
ROD_RS01905	COG0698	ribose 5-phosphate isomerase
ROD_RS01910	COG2271	Major facilitator Superfamily
ROD_RS01925	COG1064	alcohol dehydrogenase
ROD_RS01930	COG1207	Catalyzes the last two sequential reactions in the de novo biosynthetic pathway for UDP-N-acetylglucosamine (UDP- GlcNAc). The C-terminal domain catalyzes the transfer of acetyl group from acetyl coenzyme A to glucosamine-1-phosphate (GlcN-1-P) to produce N-acetylglucosamine-1-phosphate (GlcNAc-1-P), which is converted into UDP-GlcNAc by the transfer of uridine 5- monophosphate (from uridine 5-triphosphate), a reaction catalyzed by the N-terminal domain
ROD_RS01935	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ROD_RS01940	COG1529	Aldehyde oxidase and xanthine dehydrogenase
ROD_RS01945	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
ROD_RS01950	COG2080	2 iron, 2 sulfur cluster binding
ROD_RS01970	COG1271	oxidase subunit
ROD_RS01975	COG1294	oxidase, subunit
ROD_RS02015	COG2223	nitrite transmembrane transporter activity
ROD_RS02025	COG1609	Transcriptional regulator
ROD_RS02035	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
ROD_RS02045	COG3842	ATPase activity
ROD_RS02055	COG1840	ABC-type Fe3 transport system, periplasmic component
ROD_RS02060	COG2271	Major facilitator Superfamily
ROD_RS02075	COG4521	taurine ABC transporter
ROD_RS02080	COG4525	Part of the ABC transporter complex TauABC involved in taurine import. Responsible for energy coupling to the transport system
ROD_RS02085	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ROD_RS02090	COG2175	clavaminate synthase activity
ROD_RS02095	COG0113	porphobilinogen synthase activity
ROD_RS02105	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ROD_RS02110	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
ROD_RS02115	COG1133	In Escherichia coli SbmA is involved in uptake of microcin J25
ROD_RS02135	COG1181	Belongs to the D-alanine--D-alanine ligase family
ROD_RS02155	COG1785	Belongs to the alkaline phosphatase family
ROD_RS02165	COG3706	GGDEF domain
ROD_RS02170	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
ROD_RS02190	COG4126	flavin adenine dinucleotide binding
ROD_RS02195	COG3123	guanosine phosphorylase activity
ROD_RS02205	COG1940	carbohydrate kinase activity
ROD_RS02210	COG2814	Major facilitator Superfamily
ROD_RS02220	COG0419	ATPase involved in DNA repair
ROD_RS02225	COG0420	3'-5' exonuclease activity
ROD_RS02235	COG5002	protein histidine kinase activity
ROD_RS02250	COG0366	Alpha amylase catalytic
ROD_RS02265	COG0450	alkyl hydroperoxide reductase
ROD_RS02285	COG1862	Preprotein translocase
ROD_RS02290	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ROD_RS02295	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
ROD_RS02310	COG3248	Nucleoside-binding outer membrane protein
ROD_RS02315	COG4238	major outer membrane lipoprotein
ROD_RS02325	COG1985	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ROD_RS02325	COG0117	Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'-phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)- pyrimidinedione 5'-phosphate
ROD_RS02340	COG0611	Catalyzes the ATP-dependent phosphorylation of thiamine- monophosphate (TMP) to form thiamine-pyrophosphate (TPP), the active form of vitamin B1
ROD_RS02345	COG1267	Lipid phosphatase which dephosphorylates phosphatidylglycerophosphate (PGP) to phosphatidylglycerol (PG)
ROD_RS02350	COG0667	Aldo Keto reductase
ROD_RS02360	COG0142	geranyltranstransferase activity
ROD_RS02390	COG2814	Major facilitator Superfamily
ROD_RS02405	COG1053	succinate dehydrogenase
ROD_RS02415	COG1053	succinate dehydrogenase
ROD_RS02420	COG0169	Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA)
ROD_RS02425	COG1414	Transcriptional regulator
ROD_RS02435	COG3125	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor
ROD_RS02440	COG1845	cytochrome c oxidase, subunit III
ROD_RS02445	COG0843	Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B
ROD_RS02450	COG1622	oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor
ROD_RS02455	COG2223	nitrite transmembrane transporter activity
ROD_RS02460	COG3056	Lipoprotein
ROD_RS02465	COG0271	Belongs to the BolA IbaG family
ROD_RS02485	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
ROD_RS02490	COG0776	regulation of translation
ROD_RS02495	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ROD_RS02500	COG1555	photosystem II stabilization
ROD_RS02505	COG0824	Thioesterase
ROD_RS02515	COG4533	DNA binding
ROD_RS02530	COG1522	sequence-specific DNA binding
ROD_RS02535	COG1132	(ABC) transporter
ROD_RS02540	COG1132	(ABC) transporter
ROD_RS02545	COG0347	Belongs to the P(II) protein family
ROD_RS02550	COG0004	ammonium transporteR
ROD_RS02560	COG1946	Acyl-CoA thioesterase
ROD_RS02565	COG3126	Type III secretion system lipoprotein chaperone (YscW)
ROD_RS02570	COG3695	enzyme binding
ROD_RS02575	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ROD_RS02590	COG0110	maltose O-acetyltransferase activity
ROD_RS02605	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ROD_RS02610	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ROD_RS02615	COG1309	transcriptional regulator
ROD_RS02620	COG1196	nuclear chromosome segregation
ROD_RS02620	COG3264	Mechanosensitive ion channel
ROD_RS02625	COG5464	transposase or invertase
ROD_RS02645	COG3923	Primosomal replication protein n
ROD_RS02650	COG2832	Protein of unknown function (DUF454)
ROD_RS02655	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
ROD_RS02695	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS02700	COG1226	(belongs to the monovalent cation proton antiporter 2 (CPA2) transporter (TC 2.A.37) family)
ROD_RS02700	COG4651	solute:proton antiporter activity
ROD_RS02705	COG2223	nitrite transmembrane transporter activity
ROD_RS02715	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ROD_RS02720	COG3735	TraB family
ROD_RS02725	COG2217	Heavy metal translocating P-type atpase
ROD_RS02735	COG1585	Membrane protein implicated in regulation of membrane protease activity
ROD_RS02740	COG0330	HflC and HflK could
ROD_RS02745	COG4619	ABC transporter
ROD_RS02750	COG0390	transport system, permease component
ROD_RS02755	COG3118	belongs to the thioredoxin family
ROD_RS02760	COG0300	oxidoreductase activity
ROD_RS02765	COG2755	lipolytic protein G-D-S-L family
ROD_RS02770	COG4181	ATPase activity
ROD_RS02775	COG3127	ABC-type transport system involved in lysophospholipase L1, biosynthesis, permease component
ROD_RS02790	COG0026	Catalyzes the ATP-dependent conversion of 5- aminoimidazole ribonucleotide (AIR) and HCO(3)(-) to N5- carboxyaminoimidazole ribonucleotide (N5-CAIR)
ROD_RS02795	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
ROD_RS02805	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
ROD_RS02815	COG1988	membrane-bound metal-dependent
ROD_RS02820	COG2501	S4 domain
ROD_RS02850	COG0668	transmembrane transport
ROD_RS02855	COG0778	Nitroreductase
ROD_RS02860	COG2315	Protein conserved in bacteria
ROD_RS02895	COG2801	Transposase and inactivated derivatives
ROD_RS02920	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS02925	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS02930	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS02935	COG1129	ABC transporter
ROD_RS02955	COG2390	Transcriptional regulator
ROD_RS02960	COG3959	Transketolase, thiamine diphosphate binding domain
ROD_RS02965	COG3958	Transketolase
ROD_RS02970	COG2977	Belongs to the P-Pant transferase superfamily
ROD_RS02975	COG4771	TonB-dependent receptor
ROD_RS02980	COG2382	esterase
ROD_RS02985	COG3251	PFAM MbtH domain protein
ROD_RS02990	COG1020	D-alanine [D-alanyl carrier protein] ligase activity
ROD_RS02990	COG3319	amino acid activation for nonribosomal peptide biosynthetic process
ROD_RS02995	COG1120	ATPase activity
ROD_RS03000	COG4779	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ROD_RS03005	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ROD_RS03015	COG4592	Periplasmic binding protein
ROD_RS03020	COG1169	isochorismate synthase
ROD_RS03025	COG1021	2,3-dihydroxybenzoate-AMP ligase
ROD_RS03030	COG3433	isochorismatase activity
ROD_RS03030	COG1535	isochorismatase
ROD_RS03035	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS03040	COG2050	protein possibly involved in aromatic compounds catabolism
ROD_RS03050	COG0700	Nucleoside recognition
ROD_RS03055	COG3366	ferrous iron transmembrane transporter activity
ROD_RS03060	COG1966	Carbon starvation protein
ROD_RS03065	COG2879	small protein
ROD_RS03070	COG1475	DNA binding
ROD_RS03075	COG3969	phosphoadenosine phosphosulfate
ROD_RS03080	COG0583	DNA-binding transcription factor activity
ROD_RS03085	COG1651	Required for disulfide bond formation in some periplasmic proteins. Acts by transferring its disulfide bond to other proteins and is reduced in the process
ROD_RS03095	COG3634	alkyl hydroperoxide reductase activity
ROD_RS03115	COG0589	response to stress
ROD_RS03125	COG1063	alcohol dehydrogenase
ROD_RS03130	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ROD_RS03140	COG3719	Belongs to the RNase T2 family
ROD_RS03145	COG0471	metal ion transport
ROD_RS03160	COG3051	citrate lyase alpha subunit
ROD_RS03165	COG2301	Belongs to the HpcH HpaI aldolase family
ROD_RS03175	COG3053	Acetylation of prosthetic group (2-(5''-phosphoribosyl)- 3'-dephosphocoenzyme-A) of the gamma subunit of citrate lyase
ROD_RS03180	COG3290	protein histidine kinase activity
ROD_RS03185	COG4565	transcriptional regulatory protein
ROD_RS03190	COG3069	C4-dicarboxylate transmembrane transporter activity
ROD_RS03210	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ROD_RS03215	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ROD_RS03220	COG3385	transposase activity
ROD_RS03225	COG4372	Transposase
ROD_RS03230	COG3436	PFAM IS66 Orf2 family protein
ROD_RS03245	COG0583	DNA-binding transcription factor activity
ROD_RS03260	COG1686	Belongs to the peptidase S11 family
ROD_RS03265	COG0797	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ROD_RS03270	COG0772	Belongs to the SEDS family
ROD_RS03275	COG0768	penicillin binding
ROD_RS03285	COG0799	negative regulation of ribosome biogenesis
ROD_RS03305	COG1466	dna polymerase III delta subunit
ROD_RS03320	COG2888	peptidyl-tyrosine sulfation
ROD_RS03330	COG1126	abc transporter atp-binding protein
ROD_RS03335	COG0765	amino acid transport
ROD_RS03340	COG0765	amino acid transport
ROD_RS03355	COG4535	Mg2 and Co2 transporter CorC
ROD_RS03365	COG1702	phosphate starvation-inducible protein PhoH
ROD_RS03375	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ROD_RS03415	COG0367	asparagine synthase
ROD_RS03420	COG0647	UMP catabolic process
ROD_RS03425	COG1940	carbohydrate kinase activity
ROD_RS03425	COG1846	Transcriptional regulator
ROD_RS03430	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ROD_RS03440	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS03440	COG2190	(PTS) system
ROD_RS03440	COG1263	PTS System
ROD_RS03445	COG4372	Transposase
ROD_RS03450	COG3436	PFAM IS66 Orf2 family protein
ROD_RS03480	COG1053	succinate dehydrogenase
ROD_RS03485	COG0583	DNA-binding transcription factor activity
ROD_RS03490	COG0735	belongs to the Fur family
ROD_RS03505	COG0596	Alpha beta hydrolase
ROD_RS03515	COG0033	Phosphoglucomutase
ROD_RS03525	COG0531	amino acid
ROD_RS03530	COG1982	Orn Lys Arg decarboxylase major
ROD_RS03535	COG0745	RESPONSE REGULATOR receiver
ROD_RS03540	COG2205	protein histidine kinase activity
ROD_RS03570	COG3385	transposase activity
ROD_RS03575	COG0415	Belongs to the DNA photolyase family
ROD_RS03580	COG5464	transposase or invertase
ROD_RS03585	COG3104	oligopeptide transport
ROD_RS03590	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
ROD_RS03595	COG2049	5-oxoprolinase (ATP-hydrolyzing) activity
ROD_RS03600	COG1984	allophanate hydrolase subunit 2
ROD_RS03630	COG3180	Ammonia monooxygenase
ROD_RS03645	COG2009	succinate dehydrogenase
ROD_RS03650	COG2142	Succinate dehydrogenase hydrophobic membrane anchor
ROD_RS03655	COG1053	succinate dehydrogenase
ROD_RS03660	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ROD_RS03665	COG0567	Dehydrogenase, E1 component
ROD_RS03670	COG0508	dehydrogenase complex catalyzes the overall conversion of
ROD_RS03680	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ROD_RS03685	COG1271	oxidase subunit
ROD_RS03690	COG1294	oxidase, subunit
ROD_RS03695	COG4890	Cyd operon protein YbgT
ROD_RS03700	COG3790	cyd operon protein YbgE
ROD_RS03705	COG0824	Thioesterase
ROD_RS03710	COG0811	peptide transport
ROD_RS03715	COG0848	biopolymer transport protein
ROD_RS03720	COG3064	Membrane
ROD_RS03730	COG2885	chlorophyll binding
ROD_RS03735	COG1729	Mediates coordination of peptidoglycan synthesis and outer membrane constriction during cell division
ROD_RS03760	COG3201	nicotinamide mononucleotide transporter
ROD_RS03775	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ROD_RS03785	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
ROD_RS03790	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
ROD_RS03795	COG1120	ATPase activity
ROD_RS03805	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ROD_RS03810	COG1917	Cupin 2, conserved barrel domain protein
ROD_RS03810	COG2169	Transcriptional regulator
ROD_RS03815	COG1486	melibiose metabolic process
ROD_RS03820	COG3394	polysaccharide catabolic process
ROD_RS03825	COG2017	converts alpha-aldose to the beta-anomer
ROD_RS03835	COG1085	galactose-1-phosphate uridylyltransferase
ROD_RS03840	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
ROD_RS03845	COG1119	ATPase activity
ROD_RS03850	COG2005	Transcriptional regulator
ROD_RS03850	COG3585	molybdate ion transport
ROD_RS03860	COG0725	ABC transporter, periplasmic molybdate-binding protein
ROD_RS03865	COG4149	molybdate abc transporter
ROD_RS03875	COG0561	phosphatase activity
ROD_RS03885	COG0583	DNA-binding transcription factor activity
ROD_RS03890	COG2828	Protein conserved in bacteria
ROD_RS03895	COG0471	metal ion transport
ROD_RS03900	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ROD_RS03905	COG4677	pectinesterase activity
ROD_RS03935	COG1881	PFAM PEBP family protein
ROD_RS03960	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ROD_RS03980	COG0521	Mo-molybdopterin cofactor biosynthetic process
ROD_RS03990	COG1977	Involved in sulfur transfer in the conversion of molybdopterin precursor Z to molybdopterin
ROD_RS03995	COG0314	molybdopterin synthase activity
ROD_RS04000	COG0670	Belongs to the BI1 family
ROD_RS04005	COG0392	lysyltransferase activity
ROD_RS04010	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ROD_RS04015	COG3568	Endonuclease Exonuclease Phosphatase
ROD_RS04025	COG0842	Transport permease protein
ROD_RS04030	COG0842	Transport permease protein
ROD_RS04035	COG1131	(ABC) transporter
ROD_RS04045	COG1309	transcriptional regulator
ROD_RS04050	COG0583	DNA-binding transcription factor activity
ROD_RS04055	COG2271	Major facilitator Superfamily
ROD_RS04060	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS04065	COG3959	Transketolase, thiamine diphosphate binding domain
ROD_RS04070	COG3958	Transketolase
ROD_RS04075	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS04075	COG1454	alcohol dehydrogenase
ROD_RS04080	COG0513	Belongs to the DEAD box helicase family
ROD_RS04085	COG1199	ATP-dependent helicase activity
ROD_RS04090	COG0547	Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'-phosphoribosyl)-anthranilate (PRA)
ROD_RS04105	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
ROD_RS04115	COG0668	transmembrane transport
ROD_RS04120	COG1126	abc transporter atp-binding protein
ROD_RS04125	COG0765	amino acid transport
ROD_RS04130	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS04150	COG3637	Has lipid A 3-O-deacylase activity. Hydrolyzes the ester bond at the 3 position of lipid A, a bioactive component of lipopolysaccharide (LPS), thereby releasing the primary fatty acyl moiety
ROD_RS04155	COG2194	sulfuric ester hydrolase activity
ROD_RS04170	COG1055	Involved in arsenical resistance. Thought to form the channel of an arsenite pump
ROD_RS04175	COG1376	ErfK ybiS ycfS ynhG family protein
ROD_RS04180	COG0488	(ABC) transporter
ROD_RS04195	COG0501	Belongs to the peptidase M48B family
ROD_RS04200	COG0561	phosphatase activity
ROD_RS04205	COG1882	Formate acetyltransferase
ROD_RS04210	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ROD_RS04215	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ROD_RS04220	COG5464	transposase or invertase
ROD_RS04225	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ROD_RS04230	COG0303	'Molybdopterin
ROD_RS04235	COG1446	asparaginase
ROD_RS04245	COG0747	negative chemotaxis
ROD_RS04270	COG2133	pyrroloquinoline quinone binding
ROD_RS04285	COG1609	Transcriptional regulator
ROD_RS04290	COG0625	glutathione transferase activity
ROD_RS04295	COG1686	Belongs to the peptidase S11 family
ROD_RS04300	COG1349	DNA-binding transcription factor activity
ROD_RS04305	COG0671	phosphoesterase, PA-phosphatase related
ROD_RS04315	COG0561	phosphatase activity
ROD_RS04320	COG0738	Major facilitator superfamily
ROD_RS04325	COG3226	Transcriptional regulator
ROD_RS04365	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ROD_RS04370	COG3842	ATPase activity
ROD_RS04375	COG1176	ABC-type spermidine putrescine transport system, permease component I
ROD_RS04380	COG1177	transmembrane transport
ROD_RS04410	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS04415	COG4160	amino acid transport
ROD_RS04420	COG4215	(ABC) transporter
ROD_RS04425	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS04430	COG1126	abc transporter atp-binding protein
ROD_RS04445	COG3023	N-Acetylmuramoyl-L-alanine amidase
ROD_RS04450	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ROD_RS04455	COG0702	epimerase
ROD_RS04460	COG2008	Catalyzes the cleavage of L-allo-threonine and L- threonine to glycine and acetaldehyde
ROD_RS04465	COG0028	Belongs to the TPP enzyme family
ROD_RS04470	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ROD_RS04480	COG2431	L-lysine efflux transmembrane transporter activity
ROD_RS04490	COG3593	DNA synthesis involved in DNA repair
ROD_RS04495	COG2990	Protein conserved in bacteria
ROD_RS04500	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ROD_RS04510	COG1278	Cold shock
ROD_RS04520	COG0542	response to heat
ROD_RS04525	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ROD_RS04530	COG2274	protein secretion by the type I secretion system
ROD_RS04535	COG1538	Outer membrane efflux protein
ROD_RS04550	COG4372	Transposase
ROD_RS04555	COG3436	PFAM IS66 Orf2 family protein
ROD_RS04680	COG5005	Phage virion morphogenesis
ROD_RS04685	COG2369	cell adhesion
ROD_RS04695	COG4373	Mu-like prophage FluMu protein gp28
ROD_RS04765	COG3409	Peptidoglycan-binding domain 1 protein
ROD_RS04765	COG3267	Type II secretory pathway component ExeA
ROD_RS04805	COG4382	Mu-like prophage protein Gp16
ROD_RS04855	COG4987	ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease ATP-binding protein CydC
ROD_RS04860	COG4988	ABC transporter
ROD_RS04865	COG0492	ferredoxin-NADP+ reductase activity
ROD_RS04885	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
ROD_RS04895	COG0243	molybdopterin cofactor binding
ROD_RS04900	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS04905	COG3302	dmso reductase anchor subunit
ROD_RS04910	COG1335	isochorismatase
ROD_RS04920	COG0531	amino acid
ROD_RS04925	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS04930	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ROD_RS04935	COG3959	Transketolase, thiamine diphosphate binding domain
ROD_RS04950	COG1737	Transcriptional regulator
ROD_RS04960	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ROD_RS04965	COG1882	Formate acetyltransferase
ROD_RS04970	COG2116	formate transmembrane transporter activity
ROD_RS04975	COG1944	ATP diphosphatase activity
ROD_RS04980	COG2323	membrane
ROD_RS05000	COG0539	negative regulation of cytoplasmic translation
ROD_RS05010	COG2333	competence protein COMEC
ROD_RS05010	COG0658	competence protein
ROD_RS05025	COG3214	Protein conserved in bacteria
ROD_RS05040	COG3173	Aminoglycoside phosphotransferase
ROD_RS05045	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ROD_RS05050	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ROD_RS05060	COG3095	Involved in chromosome condensation, segregation and cell cycle progression. May participate in facilitating chromosome segregation by condensation DNA from both sides of a centrally located replisome during cell division. Probably acts via its interaction with MukB and MukF
ROD_RS05070	COG1470	cell adhesion involved in biofilm formation
ROD_RS05070	COG1388	LysM domain
ROD_RS05075	COG2989	Protein conserved in bacteria
ROD_RS05080	COG3108	Peptidase M15
ROD_RS05085	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ROD_RS05090	COG1448	Aminotransferase
ROD_RS05110	COG0308	aminopeptidase N
ROD_RS05120	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
ROD_RS05130	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ROD_RS05135	COG0431	NADPH-dependent FMN reductase
ROD_RS05150	COG3217	Mosc domain protein beta barrel domain protein
ROD_RS05150	COG0633	Ferredoxin
ROD_RS05160	COG0488	(ABC) transporter
ROD_RS05165	COG2995	paraquat-inducible protein a
ROD_RS05170	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ROD_RS05170	COG3008	intermembrane lipid transfer
ROD_RS05175	COG3009	Protein conserved in bacteria
ROD_RS05180	COG3130	regulation of translation
ROD_RS05190	COG1067	ATP-dependent peptidase activity
ROD_RS05195	COG3120	sequence-specific DNA binding
ROD_RS05210	COG3070	regulator of competence-specific genes
ROD_RS05215	COG1289	transmembrane transporter activity
ROD_RS05220	COG3304	Inner membrane component domain
ROD_RS05225	COG0210	DNA helicase
ROD_RS05240	COG1832	CoA-binding protein
ROD_RS05260	COG2920	part of a sulfur-relay system
ROD_RS05265	COG0670	Belongs to the BI1 family
ROD_RS05280	COG4372	Transposase
ROD_RS05285	COG3436	PFAM IS66 Orf2 family protein
ROD_RS05305	COG3772	lysozyme
ROD_RS05330	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ROD_RS05345	COG0217	transcriptional regulatory protein
ROD_RS05365	COG0628	permease
ROD_RS05370	COG0348	domain, Protein
ROD_RS05400	COG3729	General stress protein
ROD_RS05405	COG1309	transcriptional regulator
ROD_RS05420	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ROD_RS05445	COG1702	phosphate starvation-inducible protein PhoH
ROD_RS05470	COG3385	transposase activity
ROD_RS05485	COG1484	DNA-dependent DNA replication
ROD_RS05520	COG3381	protein complex oligomerization
ROD_RS05570	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ROD_RS05575	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ROD_RS05595	COG5645	(Lipo)protein
ROD_RS05610	COG1560	Kdo2-lipid A biosynthetic process
ROD_RS05625	COG3038	cytochrome b561
ROD_RS05660	COG2999	glutathione oxidoreductase activity
ROD_RS05670	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ROD_RS05685	COG0728	peptidoglycan biosynthetic process
ROD_RS05690	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS05740	COG2814	Major facilitator Superfamily
ROD_RS05745	COG0583	DNA-binding transcription factor activity
ROD_RS05750	COG1530	ribonuclease E activity
ROD_RS05760	COG0564	pseudouridine synthase activity
ROD_RS05770	COG1399	metal-binding, possibly nucleic acid-binding protein
ROD_RS05790	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ROD_RS05795	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS05805	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ROD_RS05810	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ROD_RS05815	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
ROD_RS05825	COG0470	DNA polymerase III
ROD_RS05830	COG0084	hydrolase, TatD family'
ROD_RS05840	COG4773	Receptor
ROD_RS05850	COG0537	adenosine 5'-monophosphoramidase activity
ROD_RS05855	COG5633	Lipoprotein
ROD_RS05880	COG1252	NADH dehydrogenase
ROD_RS05885	COG3134	Outer membrane lipoprotein
ROD_RS05895	COG1309	transcriptional regulator
ROD_RS05905	COG3121	Chaperone
ROD_RS05910	COG3188	usher protein
ROD_RS05920	COG1388	LysM domain
ROD_RS05920	COG1376	ErfK ybiS ycfS ynhG family protein
ROD_RS05925	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
ROD_RS05930	COG4763	Acyl-transferase
ROD_RS05935	COG4591	ABC-type transport system involved in lipoprotein release permease component
ROD_RS05945	COG4591	ABC-type transport system involved in lipoprotein release permease component
ROD_RS05955	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
ROD_RS05970	COG3468	outer membrane autotransporter barrel domain protein
ROD_RS06005	COG3468	outer membrane autotransporter barrel domain protein
ROD_RS06015	COG1116	anion transmembrane transporter activity
ROD_RS06030	COG0583	DNA-binding transcription factor activity
ROD_RS06040	COG1177	transmembrane transport
ROD_RS06085	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS06090	COG2850	peptidyl-arginine hydroxylation
ROD_RS06095	COG2205	protein histidine kinase activity
ROD_RS06110	COG0015	Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily
ROD_RS06130	COG1187	pseudouridine synthase activity
ROD_RS06135	COG0538	isocitrate dehydrogenase activity
ROD_RS06180	COG3443	Belongs to the bacterial solute-binding protein 9 family
ROD_RS06185	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
ROD_RS06190	COG2851	Citrate transporter
ROD_RS06195	COG0235	Class ii aldolase
ROD_RS06200	COG3395	kinase activity
ROD_RS06205	COG0473	3-isopropylmalate dehydrogenase activity
ROD_RS06220	COG2271	Major facilitator Superfamily
ROD_RS06230	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ROD_RS06240	COG2706	6-phosphogluconolactonase activity
ROD_RS06245	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS06250	COG2851	Citrate transporter
ROD_RS06255	COG2186	Transcriptional regulator
ROD_RS06260	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
ROD_RS06270	COG3615	Tellurite resistance protein tehB
ROD_RS06285	COG2261	transglycosylase associated protein
ROD_RS06295	COG3042	response to heat
ROD_RS06305	COG3189	MarR family transcriptional regulator
ROD_RS06310	COG1683	Conserved Protein
ROD_RS06315	COG0504	CTP synthase activity
ROD_RS06325	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
ROD_RS06330	COG2199	diguanylate cyclase activity
ROD_RS06340	COG2766	serine protein kinase
ROD_RS06345	COG3713	MltA-interacting MipA family protein
ROD_RS06350	COG0656	L-ascorbic acid biosynthetic process
ROD_RS06360	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ROD_RS06370	COG3139	Protein of unknown function (DUF1315)
ROD_RS06385	COG1063	alcohol dehydrogenase
ROD_RS06390	COG2271	Major facilitator Superfamily
ROD_RS06395	COG1063	alcohol dehydrogenase
ROD_RS06400	COG0191	fructose-bisphosphate aldolase activity
ROD_RS06405	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS06410	COG0667	Aldo Keto reductase
ROD_RS06415	COG1349	DNA-binding transcription factor activity
ROD_RS06420	COG2814	Major facilitator Superfamily
ROD_RS06425	COG4372	Transposase
ROD_RS06430	COG3436	PFAM IS66 Orf2 family protein
ROD_RS06440	COG2814	Major facilitator Superfamily
ROD_RS06445	COG1335	isochorismatase
ROD_RS06450	COG0252	asparaginase activity
ROD_RS06455	COG0616	signal peptide processing
ROD_RS06460	COG0778	Nitroreductase
ROD_RS06470	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
ROD_RS06475	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS06490	COG0494	nUDIX hydrolase
ROD_RS06495	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ROD_RS06500	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ROD_RS06505	COG2897	thiosulfate sulfurtransferase activity
ROD_RS06510	COG4136	ATPase activity
ROD_RS06515	COG4135	transport system, permease component
ROD_RS06520	COG4134	Bacterial extracellular solute-binding protein
ROD_RS06530	COG0708	Exodeoxyribonuclease III
ROD_RS06560	COG3678	ATP-independent chaperone mediated protein folding
ROD_RS06565	COG0322	excinuclease ABC activity
ROD_RS06575	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ROD_RS06580	COG1440	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ROD_RS06590	COG1447	Phosphotransferase system cellobiose-specific component IIA
ROD_RS06595	COG1917	Cupin 2, conserved barrel domain protein
ROD_RS06595	COG2169	Transcriptional regulator
ROD_RS06600	COG1486	melibiose metabolic process
ROD_RS06610	COG0753	catalase activity
ROD_RS06620	COG1823	symporter activity
ROD_RS06625	COG1988	membrane-bound metal-dependent
ROD_RS06630	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS06635	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ROD_RS06645	COG3001	Fructosamine kinase
ROD_RS06655	COG1105	Belongs to the carbohydrate kinase PfkB family
ROD_RS06660	COG3137	Salt-induced outer membrane protein
ROD_RS06695	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
ROD_RS06695	COG0072	phenylalanine-tRNA ligase activity
ROD_RS06710	COG0386	Belongs to the glutathione peroxidase family
ROD_RS06720	COG0791	NLP P60 protein
ROD_RS06735	COG4256	Hemin uptake protein
ROD_RS06740	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ROD_RS06750	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ROD_RS06750	COG0574	Belongs to the PEP-utilizing enzyme family
ROD_RS06760	COG2211	Major facilitator Superfamily
ROD_RS06775	COG3209	COG3209 Rhs family protein
ROD_RS06785	COG3209	COG3209 Rhs family protein
ROD_RS06795	COG0628	permease
ROD_RS06800	COG0277	FAD linked oxidase domain protein
ROD_RS06800	COG0247	lactate metabolic process
ROD_RS06805	COG2050	protein possibly involved in aromatic compounds catabolism
ROD_RS06815	COG0316	Belongs to the HesB IscA family
ROD_RS06820	COG0719	Fe-S assembly protein
ROD_RS06825	COG0396	ATPase activity
ROD_RS06830	COG0719	Fe-S assembly protein
ROD_RS06845	COG1376	ErfK ybiS ycfS ynhG family protein
ROD_RS06865	COG2011	ABC-type metal ion transport system permease component
ROD_RS06870	COG1464	Belongs to the NlpA lipoprotein family
ROD_RS06880	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS06885	COG2414	aldehyde ferredoxin oxidoreductase
ROD_RS06895	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS06900	COG4117	Thiosulfate reductase cytochrome B subunit (Membrane anchoring protein)
ROD_RS06910	COG0765	amino acid transport
ROD_RS06925	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS06930	COG4529	Protein conserved in bacteria
ROD_RS06935	COG4372	Transposase
ROD_RS06940	COG3436	PFAM IS66 Orf2 family protein
ROD_RS06950	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
ROD_RS06965	COG0668	transmembrane transport
ROD_RS06970	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ROD_RS07025	COG0307	riboflavin synthase, alpha
ROD_RS07030	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
ROD_RS07035	COG2814	Major facilitator Superfamily
ROD_RS07040	COG0583	DNA-binding transcription factor activity
ROD_RS07050	COG2814	Major facilitator Superfamily
ROD_RS07055	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
ROD_RS07060	COG0791	NLP P60 protein
ROD_RS07065	COG0278	Belongs to the glutaredoxin family. Monothiol subfamily
ROD_RS07075	COG0346	lactoylglutathione lyase activity
ROD_RS07080	COG1902	pentaerythritol trinitrate reductase activity
ROD_RS07085	COG1309	transcriptional regulator
ROD_RS07090	COG3313	Fe-S protein
ROD_RS07095	COG4989	oxidoreductase activity
ROD_RS07105	COG1289	transmembrane transporter activity
ROD_RS07110	COG1566	PFAM secretion protein HlyD family protein
ROD_RS07135	COG3895	Periplasmic Protein
ROD_RS07150	COG2240	Pyridoxal kinase involved in the salvage pathway of pyridoxal 5'-phosphate (PLP). Catalyzes the phosphorylation of pyridoxal to PLP
ROD_RS07155	COG0625	glutathione transferase activity
ROD_RS07165	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
ROD_RS07175	COG4659	FMN binding
ROD_RS07215	COG0673	inositol 2-dehydrogenase activity
ROD_RS07220	COG1816	Catalyzes the hydrolytic deamination of adenine to hypoxanthine. Plays an important role in the purine salvage pathway and in nitrogen catabolism
ROD_RS07225	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
ROD_RS07230	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS07230	COG1263	PTS System
ROD_RS07235	COG1609	Transcriptional regulator
ROD_RS07240	COG5339	Protein conserved in bacteria
ROD_RS07250	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ROD_RS07250	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ROD_RS07255	COG0114	fumarate hydratase activity
ROD_RS07265	COG2205	protein histidine kinase activity
ROD_RS07270	COG0745	RESPONSE REGULATOR receiver
ROD_RS07275	COG3136	membrane protein required for alginate biosynthesis
ROD_RS07285	COG0531	amino acid
ROD_RS07295	COG3288	NAD(P)+ transhydrogenase (AB-specific) activity
ROD_RS07300	COG1282	The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane
ROD_RS07305	COG0628	permease
ROD_RS07320	COG3591	Belongs to the peptidase S1B family
ROD_RS07330	COG2814	Major facilitator Superfamily
ROD_RS07335	COG0583	DNA-binding transcription factor activity
ROD_RS07340	COG1940	carbohydrate kinase activity
ROD_RS07345	COG0132	Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8-diaminopelargonic acid (DAPA) to form an ureido ring
ROD_RS07370	COG3381	protein complex oligomerization
ROD_RS07380	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ROD_RS07390	COG1063	alcohol dehydrogenase
ROD_RS07395	COG0477	Major facilitator Superfamily
ROD_RS07400	COG1904	glucuronate isomerase
ROD_RS07410	COG0246	Mannitol dehydrogenase
ROD_RS07420	COG1802	Transcriptional regulator
ROD_RS07425	COG4221	oxidoreductase activity
ROD_RS07430	COG0339	signal peptide processing
ROD_RS07445	COG1546	Belongs to the CinA family
ROD_RS07450	COG2323	membrane
ROD_RS07460	COG3111	PFAM Bacterial OB fold (BOF) protein
ROD_RS07470	COG0620	Catalyzes the transfer of a methyl group from 5- methyltetrahydrofolate to homocysteine resulting in methionine formation
ROD_RS07490	COG1129	ABC transporter
ROD_RS07495	COG0410	ABC transporter
ROD_RS07500	COG2814	Major facilitator Superfamily
ROD_RS07505	COG0697	spore germination
ROD_RS07520	COG1846	Transcriptional regulator
ROD_RS07550	COG0861	Integral membrane protein TerC family
ROD_RS07555	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ROD_RS07560	COG1454	alcohol dehydrogenase
ROD_RS07565	COG0583	DNA-binding transcription factor activity
ROD_RS07570	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS07575	COG2066	Belongs to the glutaminase family
ROD_RS07585	COG2199	diguanylate cyclase activity
ROD_RS07595	COG3781	membrane
ROD_RS07605	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ROD_RS07615	COG0591	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ROD_RS07635	COG3550	peptidyl-serine autophosphorylation
ROD_RS07640	COG3111	PFAM Bacterial OB fold (BOF) protein
ROD_RS07650	COG1649	PFAM Uncharacterised BCR, COG1649
ROD_RS07655	COG0789	Transcriptional regulator
ROD_RS07660	COG2200	EAL domain
ROD_RS07695	COG0296	Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position
ROD_RS07700	COG3706	GGDEF domain
ROD_RS07705	COG2199	diguanylate cyclase activity
ROD_RS07705	COG2200	EAL domain
ROD_RS07705	COG2202	Pas domain
ROD_RS07710	COG0583	DNA-binding transcription factor activity
ROD_RS07715	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
ROD_RS07720	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ROD_RS07730	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS07735	COG1764	response to oxidative stress
ROD_RS07760	COG3093	addiction module antidote protein HigA
ROD_RS07770	COG2864	formate dehydrogenase
ROD_RS07775	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS07780	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS07780	COG0243	molybdopterin cofactor binding
ROD_RS07785	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS07785	COG0243	molybdopterin cofactor binding
ROD_RS07790	COG0697	spore germination
ROD_RS07820	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ROD_RS07825	COG1140	nitrate reductase beta subunit
ROD_RS07830	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ROD_RS07835	COG2181	nitrate reductase activity
ROD_RS07845	COG2162	N-hydroxyarylamine O-acetyltransferase activity
ROD_RS07850	COG1853	conserved protein domain typically associated with flavoprotein oxygenases, DIM6 NTAB family
ROD_RS07855	COG0625	glutathione transferase activity
ROD_RS07870	COG1802	Transcriptional regulator
ROD_RS07875	COG2130	NADP-dependent
ROD_RS07885	COG1247	-acetyltransferase
ROD_RS07890	COG3238	Protein conserved in bacteria
ROD_RS07925	COG1177	transmembrane transport
ROD_RS07930	COG1176	ABC-type spermidine putrescine transport system, permease component I
ROD_RS07935	COG3842	ATPase activity
ROD_RS07940	COG0687	Required for the activity of the bacterial periplasmic transport system of putrescine
ROD_RS07945	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ROD_RS07950	COG1598	PFAM Uncharacterised protein family UPF0150
ROD_RS07960	COG0826	peptidase U32
ROD_RS07965	COG1396	sequence-specific DNA binding
ROD_RS07970	COG3135	benzoate transporter
ROD_RS07990	COG0500	methyltransferase
ROD_RS07995	COG1275	C4-dicarboxylate transporter malic acid transport protein
ROD_RS08000	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ROD_RS08005	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ROD_RS08010	COG2841	Protein conserved in bacteria
ROD_RS08020	COG2272	Belongs to the type-B carboxylesterase lipase family
ROD_RS08025	COG5383	Protein conserved in bacteria
ROD_RS08030	COG3485	protocatechuate 3,4-dioxygenase
ROD_RS08035	COG3485	protocatechuate 3,4-dioxygenase
ROD_RS08040	COG0583	DNA-binding transcription factor activity
ROD_RS08045	COG0840	transmembrane signaling receptor activity
ROD_RS08065	COG3038	cytochrome b561
ROD_RS08070	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
ROD_RS08075	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS08080	COG1434	Gram-negative-bacterium-type cell wall biogenesis
ROD_RS08085	COG0477	Major facilitator Superfamily
ROD_RS08095	COG1643	Atp-dependent helicase
ROD_RS08115	COG2453	phosphatase
ROD_RS08115	COG0671	phosphoesterase, PA-phosphatase related
ROD_RS08120	COG2267	carboxylic ester hydrolase activity
ROD_RS08130	COG4589	Belongs to the CDS family
ROD_RS08135	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
ROD_RS08140	COG3784	Protein of unknown function (DUF1318)
ROD_RS08150	COG2911	Protein conserved in bacteria
ROD_RS08155	COG2135	peptidase activity
ROD_RS08165	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
ROD_RS08170	COG3187	Heat shock protein
ROD_RS08175	COG3042	response to heat
ROD_RS08185	COG0791	NLP P60 protein
ROD_RS08190	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ROD_RS08190	COG0674	pyruvate-flavodoxin oxidoreductase activity
ROD_RS08190	COG1013	pyruvate-flavodoxin oxidoreductase activity
ROD_RS08190	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
ROD_RS08195	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ROD_RS08225	COG2801	Transposase and inactivated derivatives
ROD_RS08230	COG2801	Transposase and inactivated derivatives
ROD_RS08245	COG0513	Belongs to the DEAD box helicase family
ROD_RS08255	COG3706	GGDEF domain
ROD_RS08260	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ROD_RS08265	COG2021	Transfers an acetyl group from acetyl-CoA to L- homoserine, forming acetyl-L-homoserine
ROD_RS08275	COG0183	Belongs to the thiolase family
ROD_RS08280	COG2057	Acyl CoA acetate 3-ketoacid CoA transferase beta subunit
ROD_RS08290	COG1414	Transcriptional regulator
ROD_RS08295	COG2840	Smr protein MutS2
ROD_RS08300	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ROD_RS08315	COG3182	Iron-regulated membrane protein
ROD_RS08320	COG4166	transmembrane transport
ROD_RS08325	COG2866	Carboxypeptidase
ROD_RS08330	COG4948	Mandelate Racemase Muconate Lactonizing
ROD_RS08350	COG3106	COG3106 Predicted ATPase
ROD_RS08365	COG3468	outer membrane autotransporter barrel domain protein
ROD_RS08385	COG1609	Transcriptional regulator
ROD_RS08400	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ROD_RS08405	COG1554	hydrolase, family 65, central catalytic
ROD_RS08410	COG0673	inositol 2-dehydrogenase activity
ROD_RS08415	COG1082	Xylose isomerase domain protein TIM barrel
ROD_RS08420	COG1063	alcohol dehydrogenase
ROD_RS08425	COG0395	ABC-type sugar transport system, permease component
ROD_RS08430	COG1175	transmembrane transport
ROD_RS08435	COG1653	transport
ROD_RS08440	COG0366	Alpha amylase catalytic
ROD_RS08450	COG1983	PspC domain protein
ROD_RS08460	COG1842	Phage shock protein A
ROD_RS08465	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ROD_RS08480	COG4171	peptide transport system, permease
ROD_RS08485	COG4172	Belongs to the ABC transporter superfamily
ROD_RS08490	COG4172	Belongs to the ABC transporter superfamily
ROD_RS08495	COG0623	enoyl-[acyl-carrier-protein] reductase (NADH) activity
ROD_RS08500	COG4950	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ROD_RS08500	COG2128	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
ROD_RS08510	COG5001	Diguanylate cyclase
ROD_RS08520	COG1349	DNA-binding transcription factor activity
ROD_RS08530	COG0023	Translation Initiation Factor
ROD_RS08540	COG2956	Modulates cellular lipopolysaccharide (LPS) levels by regulating LpxC, which is involved in lipid A biosynthesis. May act by modulating the proteolytic activity of FtsH towards LpxC. May also coordinate assembly of proteins involved in LPS synthesis at the plasma membrane
ROD_RS08545	COG3771	Involved in the assembly of lipopolysaccharide (LPS)
ROD_RS08550	COG0671	phosphoesterase, PA-phosphatase related
ROD_RS08560	COG1048	Catalyzes the isomerization of citrate to isocitrate via cis-aconitate
ROD_RS08585	COG0616	signal peptide processing
ROD_RS08590	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS08600	COG1187	pseudouridine synthase activity
ROD_RS08605	COG0009	L-threonylcarbamoyladenylate synthase
ROD_RS08645	COG3729	General stress protein
ROD_RS08650	COG3685	Protein conserved in bacteria
ROD_RS08655	COG3685	Protein conserved in bacteria
ROD_RS08660	COG3546	catalase activity
ROD_RS08665	COG3047	cAMP biosynthetic process
ROD_RS08705	COG2350	Protein conserved in bacteria
ROD_RS08725	COG0444	Belongs to the ABC transporter superfamily
ROD_RS08745	COG2095	MarC family integral membrane protein
ROD_RS08750	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS08750	COG1454	alcohol dehydrogenase
ROD_RS08770	COG1210	Utp--glucose-1-phosphate uridylyltransferase
ROD_RS08775	COG0745	RESPONSE REGULATOR receiver
ROD_RS08780	COG1752	Esterase of the alpha-beta hydrolase superfamily
ROD_RS08790	COG0788	formyltetrahydrofolate deformylase activity
ROD_RS08805	COG2181	nitrate reductase activity
ROD_RS08810	COG2180	nitrate reductase molybdenum cofactor assembly chaperone
ROD_RS08815	COG1140	nitrate reductase beta subunit
ROD_RS08820	COG5013	Belongs to the prokaryotic molybdopterin-containing oxidoreductase family
ROD_RS08825	COG2223	nitrite transmembrane transporter activity
ROD_RS08830	COG3850	Histidine kinase
ROD_RS08835	COG2197	response regulator
ROD_RS08840	COG4932	domain protein
ROD_RS08845	COG0243	molybdopterin cofactor binding
ROD_RS08850	COG2146	nitrite reductase [NAD(P)H] activity
ROD_RS08850	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ROD_RS08855	COG1116	anion transmembrane transporter activity
ROD_RS08865	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
ROD_RS08870	COG3707	response regulator
ROD_RS08875	COG1553	Part of a sulfur-relay system required for 2-thiolation of 5-methylaminomethyl-2-thiouridine (mnm(5)s(2)U) at tRNA wobble positions. Accepts sulfur from TusA and transfers it in turn to TusE
ROD_RS08885	COG3703	Catalyzes the cleavage of glutathione into 5-oxo-L- proline and a Cys-Gly dipeptide. Acts specifically on glutathione, but not on other gamma-glutamyl peptides
ROD_RS08890	COG4572	Cation transport regulator
ROD_RS08895	COG0387	Pfam Sodium calcium exchanger
ROD_RS08915	COG2890	protein-(glutamine-N5) methyltransferase activity
ROD_RS08945	COG0659	secondary active sulfate transmembrane transporter activity
ROD_RS08960	COG0012	GTP binding
ROD_RS08995	COG3121	Chaperone
ROD_RS09010	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
ROD_RS09020	COG4774	siderophore transport
ROD_RS09030	COG5581	Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)- dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility
ROD_RS09040	COG1619	proteins homologs of microcin C7 resistance protein MccF
ROD_RS09050	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ROD_RS09060	COG2719	SpoVR family
ROD_RS09090	COG0179	Fumarylacetoacetate (FAA) hydrolase
ROD_RS09105	COG2894	cell division
ROD_RS09115	COG0583	DNA-binding transcription factor activity
ROD_RS09120	COG0473	3-isopropylmalate dehydrogenase activity
ROD_RS09125	COG0349	Exonuclease involved in the 3' processing of various precursor tRNAs. Initiates hydrolysis at the 3'-terminus of an RNA molecule and releases 5'-mononucleotides
ROD_RS09135	COG3065	identical protein binding
ROD_RS09140	COG1214	PFAM Peptidase M22, glycoprotease
ROD_RS09145	COG1199	ATP-dependent helicase activity
ROD_RS09150	COG0251	oxidation-reduction process
ROD_RS09160	COG0147	Part of a heterotetrameric complex that catalyzes the two-step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine- binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentrations of ammonia
ROD_RS09170	COG1760	l-serine dehydratase
ROD_RS09175	COG2200	EAL domain
ROD_RS09180	COG1253	flavin adenine dinucleotide binding
ROD_RS09190	COG2893	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS09190	COG3444	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS09195	COG3715	PTS system
ROD_RS09200	COG3716	PTS system mannose fructose sorbose family IID component
ROD_RS09215	COG2226	methyltransferase
ROD_RS09220	COG0768	penicillin binding
ROD_RS09250	COG1414	Transcriptional regulator
ROD_RS09255	COG2814	Major facilitator Superfamily
ROD_RS09275	COG1956	GAF domain-containing protein
ROD_RS09280	COG2995	paraquat-inducible protein a
ROD_RS09285	COG3008	intermembrane lipid transfer
ROD_RS09315	COG1276	copper resistance
ROD_RS09320	COG2372	response to copper ion
ROD_RS09330	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
ROD_RS09335	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ROD_RS09340	COG1770	oligopeptidase
ROD_RS09345	COG2979	Protein of unknown function (DUF533)
ROD_RS09355	COG3141	response to X-ray
ROD_RS09365	COG0800	Aldolase
ROD_RS09370	COG0129	dihydroxy-acid dehydratase activity
ROD_RS09375	COG0364	Catalyzes the oxidation of glucose 6-phosphate to 6- phosphogluconolactone
ROD_RS09380	COG1737	Transcriptional regulator
ROD_RS09395	COG1560	Kdo2-lipid A biosynthetic process
ROD_RS09400	COG0739	heme binding
ROD_RS09405	COG4531	ABC-type Zn2 transport system, periplasmic component surface adhesin
ROD_RS09415	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ROD_RS09445	COG0494	nUDIX hydrolase
ROD_RS09455	COG1335	isochorismatase
ROD_RS09480	COG3788	relative of glutathione S-transferase, MAPEG superfamily
ROD_RS09500	COG3102	Protein conserved in bacteria
ROD_RS09510	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ROD_RS09600	COG1301	dicarboxylic acid transport
ROD_RS09645	COG1877	trehalose-phosphatase activity
ROD_RS09650	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS09660	COG1879	ABC-type sugar transport system periplasmic component
ROD_RS09670	COG1528	Iron-storage protein
ROD_RS09680	COG0477	Major facilitator Superfamily
ROD_RS09695	COG1528	Iron-storage protein
ROD_RS09705	COG0814	amino acid
ROD_RS09710	COG3318	Belongs to the UPF0149 family
ROD_RS09710	COG3012	SEC-C Motif Domain Protein
ROD_RS09725	COG2801	Transposase and inactivated derivatives
ROD_RS09755	COG2197	response regulator
ROD_RS09765	COG2197	response regulator
ROD_RS09770	COG1126	abc transporter atp-binding protein
ROD_RS09775	COG0765	amino acid transport
ROD_RS09780	COG2515	1-aminocyclopropane-1-carboxylate deaminase
ROD_RS09785	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS09810	COG2314	TM2 domain
ROD_RS09865	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ROD_RS09940	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ROD_RS09965	COG0366	Alpha amylase catalytic
ROD_RS09980	COG0425	Belongs to the sulfur carrier protein TusA family
ROD_RS09985	COG4571	Outer membrane protease
ROD_RS10005	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
ROD_RS10015	COG1157	protein secretion by the type III secretion system
ROD_RS10030	COG1580	Controls the rotational direction of flagella during chemotaxis
ROD_RS10055	COG1987	bacterial-type flagellum assembly
ROD_RS10065	COG2197	response regulator
ROD_RS10090	COG5475	Uncharacterized small protein (DUF2158)
ROD_RS10095	COG2354	Protein conserved in bacteria
ROD_RS10100	COG0697	spore germination
ROD_RS10105	COG3727	T/G mismatch-specific endonuclease activity
ROD_RS10110	COG0270	DNA (cytosine-5-)-methyltransferase activity
ROD_RS10115	COG1418	mRNA catabolic process
ROD_RS10125	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ROD_RS10130	COG0582	viral genome integration into host DNA
ROD_RS10230	COG0583	DNA-binding transcription factor activity
ROD_RS10245	COG0582	viral genome integration into host DNA
ROD_RS10335	COG1032	radical SAM domain protein
ROD_RS10370	COG0477	Major facilitator Superfamily
ROD_RS10375	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
ROD_RS10385	COG0534	Mate efflux family protein
ROD_RS10395	COG0583	DNA-binding transcription factor activity
ROD_RS10400	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ROD_RS10405	COG3069	C4-dicarboxylate transmembrane transporter activity
ROD_RS10410	COG1376	ErfK ybiS ycfS ynhG family protein
ROD_RS10570	COG4869	propanediol catabolic process
ROD_RS10580	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
ROD_RS10595	COG1454	alcohol dehydrogenase
ROD_RS10595	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS10600	COG4656	Part of a membrane complex involved in electron transport
ROD_RS10620	COG0282	Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction
ROD_RS10640	COG3449	Inhibits the supercoiling activity of DNA gyrase. Acts by inhibiting DNA gyrase at an early step, prior to (or at the step of) binding of DNA by the gyrase. It protects cells against toxins that target DNA gyrase, by inhibiting activity of these toxins and reducing the formation of lethal double-strand breaks in the cell
ROD_RS10650	COG2925	Exonuclease
ROD_RS10655	COG0425	Belongs to the sulfur carrier protein TusA family
ROD_RS10660	COG2391	methyltransferase activity
ROD_RS10670	COG0531	amino acid
ROD_RS10675	COG0583	DNA-binding transcription factor activity
ROD_RS10680	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ROD_RS10705	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
ROD_RS10730	COG1004	Belongs to the UDP-glucose GDP-mannose dehydrogenase family
ROD_RS10740	COG0438	transferase activity, transferring glycosyl groups
ROD_RS10805	COG2327	Polysaccharide pyruvyl transferase
ROD_RS10810	COG2244	polysaccharide biosynthetic process
ROD_RS10815	COG2148	undecaprenyl-phosphate glucose phosphotransferase activity
ROD_RS10820	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
ROD_RS10830	COG0297	glycogen (starch) synthase activity
ROD_RS10835	COG1051	belongs to the nudix hydrolase family
ROD_RS10840	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
ROD_RS10845	COG1089	Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose
ROD_RS10850	COG0110	maltose O-acetyltransferase activity
ROD_RS10855	COG1216	Glycosyl transferase, family 2
ROD_RS10865	COG0438	transferase activity, transferring glycosyl groups
ROD_RS10870	COG1045	serine acetyltransferase
ROD_RS10875	COG0463	Glycosyl transferase, family 2
ROD_RS10885	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
ROD_RS10895	COG1253	flavin adenine dinucleotide binding
ROD_RS10900	COG2982	Protein involved in outer membrane biogenesis
ROD_RS10915	COG5002	protein histidine kinase activity
ROD_RS10915	COG5001	Diguanylate cyclase
ROD_RS10915	COG3447	MASE1 domain protein
ROD_RS10920	COG0122	3-methyladenine DNA glycosylase 8-oxoguanine DNA glycosylase
ROD_RS10925	COG0443	Heat shock 70 kDa protein
ROD_RS10955	COG2205	protein histidine kinase activity
ROD_RS10960	COG0745	RESPONSE REGULATOR receiver
ROD_RS10970	COG0826	peptidase U32
ROD_RS10985	COG4608	Belongs to the ABC transporter superfamily
ROD_RS10990	COG0444	Belongs to the ABC transporter superfamily
ROD_RS10995	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ROD_RS11000	COG0601	transmembrane transport
ROD_RS11005	COG0747	negative chemotaxis
ROD_RS11010	COG4948	Mandelate Racemase Muconate Lactonizing
ROD_RS11015	COG1830	Aldolase
ROD_RS11020	COG2211	Major facilitator Superfamily
ROD_RS11025	COG1397	ADP-ribosylglycohydrolase
ROD_RS11030	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS11035	COG2188	Transcriptional regulator
ROD_RS11040	COG0351	phosphomethylpyrimidine kinase
ROD_RS11050	COG5455	response to cobalt ion
ROD_RS11055	COG3539	Fimbrial protein
ROD_RS11060	COG3188	usher protein
ROD_RS11065	COG3121	Chaperone
ROD_RS11070	COG3539	Fimbrial protein
ROD_RS11075	COG0489	protein tyrosine kinase activity
ROD_RS11085	COG4807	Protein conserved in bacteria
ROD_RS11095	COG3275	phosphorelay sensor kinase activity
ROD_RS11100	COG0789	Transcriptional regulator
ROD_RS11110	COG1174	glycine betaine transport
ROD_RS11115	COG1125	glycine betaine transport
ROD_RS11120	COG1174	glycine betaine transport
ROD_RS11125	COG1732	Glycine betaine
ROD_RS11130	COG2814	Major facilitator Superfamily
ROD_RS11155	COG1472	Belongs to the glycosyl hydrolase 3 family
ROD_RS11160	COG0277	FAD linked oxidase domain protein
ROD_RS11185	COG1686	Belongs to the peptidase S11 family
ROD_RS11195	COG0586	Pfam SNARE associated Golgi protein
ROD_RS11200	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS11205	COG1538	Outer membrane efflux protein
ROD_RS11215	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ROD_RS11220	COG0625	glutathione transferase activity
ROD_RS11235	COG2271	Major facilitator Superfamily
ROD_RS11250	COG1346	cytolysis
ROD_RS11260	COG2949	membrane
ROD_RS11285	COG1879	ABC-type sugar transport system periplasmic component
ROD_RS11295	COG2311	Membrane
ROD_RS11310	COG4771	TonB-dependent receptor
ROD_RS11320	COG0833	amino acid
ROD_RS11325	COG0583	DNA-binding transcription factor activity
ROD_RS11330	COG2855	membrane
ROD_RS11345	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS11345	COG1522	sequence-specific DNA binding
ROD_RS11350	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ROD_RS11355	COG2313	pseudouridylate synthase activity
ROD_RS11360	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS11365	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS11365	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS11365	COG3925	protein-phosphocysteine-D-fructose-phosphotransferase system transporter activity
ROD_RS11370	COG1105	Belongs to the carbohydrate kinase PfkB family
ROD_RS11400	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS11405	COG1312	Catalyzes the dehydration of D-mannonate
ROD_RS11410	COG0246	Mannitol dehydrogenase
ROD_RS11415	COG0523	cobalamin synthesis protein
ROD_RS11420	COG0671	phosphoesterase, PA-phosphatase related
ROD_RS11425	COG0791	NLP P60 protein
ROD_RS11430	COG2200	EAL domain
ROD_RS11435	COG4166	transmembrane transport
ROD_RS11440	COG4174	ABC transporter (Permease)
ROD_RS11445	COG4239	(ABC) transporter, permease
ROD_RS11450	COG4172	Belongs to the ABC transporter superfamily
ROD_RS11460	COG2814	Major facilitator Superfamily
ROD_RS11465	COG1187	pseudouridine synthase activity
ROD_RS11470	COG1061	Type III restriction enzyme res subunit
ROD_RS11500	COG1442	glycosyl transferase family 8
ROD_RS11500	COG1216	Glycosyl transferase, family 2
ROD_RS11510	COG2197	response regulator
ROD_RS11515	COG4235	cytochrome complex assembly
ROD_RS11515	COG3088	subunit of a heme lyase
ROD_RS11520	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
ROD_RS11525	COG1138	Cytochrome C-type biogenesis protein
ROD_RS11535	COG3114	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ROD_RS11540	COG0755	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ROD_RS11545	COG2386	Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes
ROD_RS11550	COG4133	protoheme IX ABC transporter activity
ROD_RS11555	COG3005	denitrification pathway
ROD_RS11560	COG3043	anaerobic respiration
ROD_RS11565	COG0348	domain, Protein
ROD_RS11570	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS11580	COG3062	negative regulation of establishment of protein localization
ROD_RS11585	COG1149	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS11585	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS11600	COG0659	secondary active sulfate transmembrane transporter activity
ROD_RS11605	COG2239	Acts as a magnesium transporter
ROD_RS11610	COG4615	Cyclic peptide transporter
ROD_RS11615	COG3145	DNA-N1-methyladenine dioxygenase activity
ROD_RS11620	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
ROD_RS11620	COG2169	Transcriptional regulator
ROD_RS11625	COG1477	protein flavinylation
ROD_RS11630	COG3203	Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane
ROD_RS11635	COG2198	Histidine kinase
ROD_RS11635	COG0642	Histidine kinase
ROD_RS11660	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ROD_RS11665	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
ROD_RS11670	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ROD_RS11680	COG4372	Transposase
ROD_RS11685	COG3436	PFAM IS66 Orf2 family protein
ROD_RS11705	COG0583	DNA-binding transcription factor activity
ROD_RS11710	COG0385	Bile acid
ROD_RS11715	COG3530	Putative quorum-sensing-regulated virulence factor
ROD_RS11745	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS11785	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
ROD_RS11790	COG4208	sulfate ABC transporter
ROD_RS11800	COG4150	thiosulfate binding
ROD_RS11810	COG2837	iron assimilation
ROD_RS11830	COG0860	N-Acetylmuramoyl-L-alanine amidase
ROD_RS11935	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ROD_RS11940	COG5342	invasion associated locus B
ROD_RS11950	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS11950	COG0493	'glutamate synthase
ROD_RS11955	COG3850	Histidine kinase
ROD_RS11965	COG1393	Belongs to the ArsC family
ROD_RS11980	COG0400	carboxylic ester hydrolase activity
ROD_RS11990	COG2321	neutral zinc metallopeptidase
ROD_RS12000	COG3317	Gram-negative-bacterium-type cell outer membrane assembly
ROD_RS12010	COG2716	regulation of RNA biosynthetic process
ROD_RS12015	COG1225	Alkyl hydroperoxide reductase Thiol specific antioxidant Mal allergen
ROD_RS12020	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
ROD_RS12025	COG0700	Nucleoside recognition
ROD_RS12030	COG3366	ferrous iron transmembrane transporter activity
ROD_RS12035	COG0628	permease
ROD_RS12040	COG4783	chaperone-mediated protein folding
ROD_RS12045	COG1393	Belongs to the ArsC family
ROD_RS12060	COG2233	PERMEase
ROD_RS12075	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
ROD_RS12085	COG0248	Ppx GppA phosphatase
ROD_RS12090	COG2200	EAL domain
ROD_RS12105	COG0516	GMP reductase activity
ROD_RS12105	COG0517	IMP dehydrogenase activity
ROD_RS12125	COG1645	bacterial-type flagellum-dependent swarming motility
ROD_RS12140	COG2976	Protein conserved in bacteria
ROD_RS12175	COG2373	Large extracellular alpha-helical protein
ROD_RS12180	COG2897	thiosulfate sulfurtransferase activity
ROD_RS12195	COG2975	iron-sulfur cluster assembly
ROD_RS12200	COG0633	Ferredoxin
ROD_RS12220	COG0822	iron-sulfur transferase activity
ROD_RS12245	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ROD_RS12250	COG3683	transport system, periplasmic component
ROD_RS12260	COG1129	ABC transporter
ROD_RS12265	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS12275	COG1069	ribulokinase activity
ROD_RS12280	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ROD_RS12280	COG0517	IMP dehydrogenase activity
ROD_RS12285	COG3711	transcriptional antiterminator
ROD_RS12290	COG2814	Major facilitator Superfamily
ROD_RS12300	COG0477	Major facilitator Superfamily
ROD_RS12300	COG2814	Major facilitator Superfamily
ROD_RS12305	COG0457	Tetratricopeptide repeat
ROD_RS12310	COG1940	carbohydrate kinase activity
ROD_RS12325	COG1018	Is involved in NO detoxification in an aerobic process, termed nitric oxide dioxygenase (NOD) reaction that utilizes O(2) and NAD(P)H to convert NO to nitrate, which protects the bacterium from various noxious nitrogen compounds. Therefore, plays a central role in the inducible response to nitrosative stress
ROD_RS12325	COG1017	nitric oxide dioxygenase activity
ROD_RS12330	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS12335	COG0347	Belongs to the P(II) protein family
ROD_RS12340	COG2204	response regulator
ROD_RS12345	COG3170	Tfp pilus assembly protein FimV
ROD_RS12350	COG2205	protein histidine kinase activity
ROD_RS12375	COG0560	Phosphoserine phosphatase
ROD_RS12380	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS12380	COG1263	PTS System
ROD_RS12385	COG2103	Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6- phosphate and D-lactate
ROD_RS12390	COG1737	Transcriptional regulator
ROD_RS12395	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS12405	COG0854	Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino-2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate
ROD_RS12425	COG0681	Belongs to the peptidase S26 family
ROD_RS12440	COG3086	response to oxidative stress
ROD_RS12445	COG3026	antisigma factor binding
ROD_RS12450	COG3073	An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cytoplasmic proteases finish degrading the anti-sigma factor, liberating sigma-E
ROD_RS12460	COG0029	Catalyzes the oxidation of L-aspartate to iminoaspartate
ROD_RS12470	COG0513	Belongs to the DEAD box helicase family
ROD_RS12485	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ROD_RS12490	COG3118	belongs to the thioredoxin family
ROD_RS12495	COG3148	PFAM DTW domain containing protein
ROD_RS12500	COG1042	CoA-binding domain protein
ROD_RS12500	COG0045	succinate-CoA ligase (ADP-forming) activity
ROD_RS12500	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ROD_RS12505	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
ROD_RS12515	COG5544	Lipoprotein
ROD_RS12520	COG0477	Major facilitator Superfamily
ROD_RS12545	COG0542	response to heat
ROD_RS12555	COG0564	pseudouridine synthase activity
ROD_RS12560	COG4105	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ROD_RS12565	COG1544	Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase
ROD_RS12570	COG0077	Prephenate dehydratase
ROD_RS12570	COG1605	Chorismate mutase
ROD_RS12605	COG0329	Catalyzes the condensation of (S)-aspartate-beta- semialdehyde (S)-ASA and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA)
ROD_RS12610	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS12615	COG0531	amino acid
ROD_RS12620	COG0287	Prephenate dehydrogenase
ROD_RS12620	COG1605	Chorismate mutase
ROD_RS12625	COG0722	Stereospecific condensation of phosphoenolpyruvate (PEP) and D-erythrose-4-phosphate (E4P) giving rise to 3-deoxy-D- arabino-heptulosonate-7-phosphate (DAHP)
ROD_RS12635	COG2199	diguanylate cyclase activity
ROD_RS12640	COG2885	chlorophyll binding
ROD_RS12665	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
ROD_RS12670	COG4137	Cytochrome C assembly protein
ROD_RS12675	COG4536	flavin adenine dinucleotide binding
ROD_RS12690	COG0497	DNA recombination
ROD_RS12695	COG2913	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ROD_RS12705	COG2867	negative regulation of translational initiation
ROD_RS12715	COG4733	cellulase activity
ROD_RS12715	COG5297	Belongs to the glycosyl hydrolase family 6
ROD_RS12730	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ROD_RS12755	COG2110	phosphatase homologous to the C-terminal domain of histone macroH2A1
ROD_RS12760	COG5301	cellulose 1,4-beta-cellobiosidase activity
ROD_RS12760	COG5301	cellulose 1,4-beta-cellobiosidase activity
ROD_RS12795	COG0741	lytic transglycosylase activity
ROD_RS12810	COG4386	tail sheath protein
ROD_RS12850	COG0616	signal peptide processing
ROD_RS12930	COG1403	HNH endonuclease
ROD_RS12940	COG4725	Belongs to the MT-A70-like family
ROD_RS12945	COG4626	Terminase
ROD_RS12945	COG1802	Transcriptional regulator
ROD_RS12975	COG5532	Uncharacterized conserved protein (DUF2303)
ROD_RS12980	COG1896	Catalyzes the strictly specific dephosphorylation of 2'- deoxyribonucleoside 5'-monophosphates
ROD_RS12995	COG2189	Belongs to the N(4) N(6)-methyltransferase family
ROD_RS13010	COG0582	viral genome integration into host DNA
ROD_RS13015	COG0419	ATPase involved in DNA repair
ROD_RS13025	COG0582	viral genome integration into host DNA
ROD_RS13035	COG2801	Transposase and inactivated derivatives
ROD_RS13045	COG2963	transposase activity
ROD_RS13055	COG4372	Transposase
ROD_RS13060	COG3436	PFAM IS66 Orf2 family protein
ROD_RS13075	COG3436	PFAM IS66 Orf2 family protein
ROD_RS13080	COG4372	Transposase
ROD_RS13090	COG3209	COG3209 Rhs family protein
ROD_RS13095	COG0584	glycerophosphoryl diester phosphodiesterase
ROD_RS13100	COG2271	Major facilitator Superfamily
ROD_RS13105	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ROD_RS13115	COG0247	lactate metabolic process
ROD_RS13120	COG5464	transposase or invertase
ROD_RS13130	COG2271	Major facilitator Superfamily
ROD_RS13140	COG1414	Transcriptional regulator
ROD_RS13165	COG0318	PFAM AMP-dependent synthetase and ligase
ROD_RS13190	COG1169	isochorismate synthase
ROD_RS13195	COG4575	ribosome binding
ROD_RS13200	COG2153	protein acetylation
ROD_RS13210	COG0835	chemotaxis
ROD_RS13210	COG0784	Response regulator, receiver
ROD_RS13215	COG3385	transposase activity
ROD_RS13225	COG1008	NDH-1 shuttles electrons from NAD(P)H, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ROD_RS13230	COG1009	NADH ubiquinone oxidoreductase subunit 5 chain L Multisubunit Na H antiporter, MnhA subunit
ROD_RS13240	COG0839	Belongs to the complex I subunit 6 family
ROD_RS13250	COG1005	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. This subunit may bind ubiquinone
ROD_RS13285	COG0583	DNA-binding transcription factor activity
ROD_RS13290	COG0436	Aminotransferase
ROD_RS13300	COG0490	domain, Protein
ROD_RS13300	COG0471	metal ion transport
ROD_RS13305	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ROD_RS13330	COG1288	antiporter activity
ROD_RS13335	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
ROD_RS13340	COG3959	Transketolase, thiamine diphosphate binding domain
ROD_RS13345	COG3037	sugar-specific permease SgaT UlaA
ROD_RS13355	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS13360	COG1609	Transcriptional regulator
ROD_RS13370	COG0622	Phosphoesterase
ROD_RS13375	COG0625	glutathione transferase activity
ROD_RS13380	COG0625	glutathione transferase activity
ROD_RS13385	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ROD_RS13390	COG1090	epimerase
ROD_RS13395	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
ROD_RS13400	COG4598	ABC transporter
ROD_RS13415	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS13425	COG0163	prenyltransferase activity
ROD_RS13430	COG1609	Transcriptional regulator
ROD_RS13435	COG2211	Major facilitator Superfamily
ROD_RS13445	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
ROD_RS13450	COG1286	toxin biosynthetic process
ROD_RS13455	COG3147	Non-essential cell division protein that could be required for efficient cell constriction
ROD_RS13460	COG0285	dihydrofolate synthase activity
ROD_RS13470	COG0586	Pfam SNARE associated Golgi protein
ROD_RS13480	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ROD_RS13500	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ROD_RS13515	COG3101	peptidyl-lysine hydroxylation
ROD_RS13520	COG0730	response to heat
ROD_RS13545	COG2062	phosphohistidine phosphatase, SixA
ROD_RS13560	COG3691	Protein conserved in bacteria
ROD_RS13565	COG2067	long-chain fatty acid transport protein
ROD_RS13575	COG2116	formate transmembrane transporter activity
ROD_RS13610	COG0583	DNA-binding transcription factor activity
ROD_RS13625	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
ROD_RS13700	COG3188	usher protein
ROD_RS13705	COG3121	Chaperone
ROD_RS13755	COG1126	abc transporter atp-binding protein
ROD_RS13760	COG0765	amino acid transport
ROD_RS13770	COG1560	Kdo2-lipid A biosynthetic process
ROD_RS13780	COG0436	Aminotransferase
ROD_RS13785	COG3275	phosphorelay sensor kinase activity
ROD_RS13790	COG3279	Response regulator of the LytR AlgR family
ROD_RS13795	COG2207	Transcriptional regulator
ROD_RS13805	COG3122	Protein conserved in bacteria
ROD_RS13815	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ROD_RS13815	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS13815	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS13820	COG1363	Peptidase, m42
ROD_RS13825	COG0006	proline dipeptidase activity
ROD_RS13830	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS13835	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS13850	COG3961	Belongs to the TPP enzyme family
ROD_RS13855	COG0667	Aldo Keto reductase
ROD_RS13870	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
ROD_RS13875	COG2200	EAL domain
ROD_RS13875	COG2199	diguanylate cyclase activity
ROD_RS13905	COG3415	Transposase
ROD_RS13910	COG3415	Transposase
ROD_RS13935	COG3501	Rhs element vgr protein
ROD_RS13940	COG3209	COG3209 Rhs family protein
ROD_RS13945	COG3209	COG3209 Rhs family protein
ROD_RS13950	COG3209	COG3209 Rhs family protein
ROD_RS13955	COG4372	Transposase
ROD_RS13960	COG3436	PFAM IS66 Orf2 family protein
ROD_RS13990	COG3436	PFAM IS66 Orf2 family protein
ROD_RS13995	COG4372	Transposase
ROD_RS14010	COG1611	Belongs to the LOG family
ROD_RS14015	COG0814	amino acid
ROD_RS14020	COG1760	l-serine dehydratase
ROD_RS14025	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS14035	COG0235	Class ii aldolase
ROD_RS14050	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS14060	COG1129	ABC transporter
ROD_RS14080	COG1349	DNA-binding transcription factor activity
ROD_RS14090	COG2363	Small membrane protein
ROD_RS14095	COG0583	DNA-binding transcription factor activity
ROD_RS14105	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
ROD_RS14110	COG2166	iron-sulfur cluster assembly
ROD_RS14115	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
ROD_RS14120	COG2821	murein-degrading enzyme. may play a role in recycling of muropeptides during cell elongation and or cell division
ROD_RS14140	COG0860	N-Acetylmuramoyl-L-alanine amidase
ROD_RS14150	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
ROD_RS14150	COG0548	Belongs to the acetylglutamate kinase family. ArgB subfamily
ROD_RS14155	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
ROD_RS14160	COG1074	ATP-dependent DNA helicase activity
ROD_RS14165	COG1025	Belongs to the peptidase M16 family
ROD_RS14170	COG1330	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit recognizes the wild- type Chi sequence, and when added to isolated RecB increases its ATP-dependent helicase processivity
ROD_RS14175	COG4967	type IV pilus modification protein PilV
ROD_RS14185	COG4795	General secretion pathway protein
ROD_RS14190	COG2165	general secretion pathway protein
ROD_RS14225	COG0861	Integral membrane protein TerC family
ROD_RS14235	COG0667	Aldo Keto reductase
ROD_RS14250	COG1609	Transcriptional regulator
ROD_RS14260	COG0583	DNA-binding transcription factor activity
ROD_RS14265	COG1794	racemase activity, acting on amino acids and derivatives
ROD_RS14275	COG1175	transmembrane transport
ROD_RS14280	COG0395	ABC-type sugar transport system, permease component
ROD_RS14285	COG3842	ATPase activity
ROD_RS14295	COG2814	Major facilitator Superfamily
ROD_RS14300	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS14310	COG0823	Involved in the tonB-independent uptake of proteins
ROD_RS14315	COG1452	involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane
ROD_RS14330	COG0183	Belongs to the thiolase family
ROD_RS14335	COG0814	amino acid
ROD_RS14340	COG2771	luxR family
ROD_RS14360	COG2388	GCN5-related N-acetyl-transferase
ROD_RS14365	COG3592	Divergent 4Fe-4S mono-cluster
ROD_RS14370	COG3710	Transcriptional regulator
ROD_RS14395	COG0582	viral genome integration into host DNA
ROD_RS14400	COG4974	Belongs to the 'phage' integrase family
ROD_RS14410	COG3539	Fimbrial protein
ROD_RS14415	COG3121	Chaperone
ROD_RS14420	COG3188	usher protein
ROD_RS14425	COG3539	Fimbrial protein
ROD_RS14430	COG3539	Fimbrial protein
ROD_RS14435	COG3539	Fimbrial protein
ROD_RS14455	COG3188	usher protein
ROD_RS14470	COG2200	EAL domain
ROD_RS14505	COG2200	EAL domain
ROD_RS14525	COG3121	Chaperone
ROD_RS14555	COG4974	Belongs to the 'phage' integrase family
ROD_RS14585	COG2771	luxR family
ROD_RS14635	COG2801	Transposase and inactivated derivatives
ROD_RS14645	COG3204	pilus organization
ROD_RS14845	COG4372	Transposase
ROD_RS14850	COG3436	PFAM IS66 Orf2 family protein
ROD_RS14860	COG5499	transcription regulator containing HTH domain
ROD_RS14865	COG4680	protein conserved in bacteria
ROD_RS14870	COG3098	single-species biofilm formation
ROD_RS14880	COG0716	FMN binding
ROD_RS14885	COG2271	Major facilitator Superfamily
ROD_RS14890	COG4948	Mandelate Racemase Muconate Lactonizing
ROD_RS14895	COG4948	Mandelate Racemase Muconate Lactonizing
ROD_RS14900	COG1929	Belongs to the glycerate kinase type-1 family
ROD_RS14905	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS14910	COG3850	Histidine kinase
ROD_RS14910	COG4999	Histidine kinase
ROD_RS14910	COG3437	response regulator, receiver
ROD_RS14910	COG2205	protein histidine kinase activity
ROD_RS14920	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ROD_RS14925	COG3956	TIGRFAM MazG family protein
ROD_RS14940	COG0602	queuosine metabolic process
ROD_RS14950	COG1473	amidohydrolase
ROD_RS14955	COG1917	Cupin 2, conserved barrel domain protein
ROD_RS14955	COG4977	sequence-specific DNA binding
ROD_RS14960	COG0720	synthase
ROD_RS14980	COG1203	CRISPR-associated helicase, Cas3
ROD_RS14995	COG1857	crispr-associated protein
ROD_RS15010	COG1518	maintenance of DNA repeat elements
ROD_RS15015	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
ROD_RS15035	COG2234	aminopeptidase activity
ROD_RS15090	COG1388	LysM domain
ROD_RS15090	COG4942	peptidase
ROD_RS15095	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
ROD_RS15105	COG0163	prenyltransferase activity
ROD_RS15110	COG0043	3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
ROD_RS15130	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ROD_RS15135	COG1108	ABC-type Mn2 Zn2 transport systems permease components
ROD_RS15140	COG1121	(ABC) transporter
ROD_RS15160	COG0309	Hydrogenase expression formation protein (HypE)
ROD_RS15165	COG0409	Hydrogenase expression formation protein
ROD_RS15170	COG0298	carbon dioxide binding
ROD_RS15175	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
ROD_RS15190	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS15195	COG0651	ATP synthesis coupled electron transport
ROD_RS15200	COG0650	Formate hydrogenlyase subunit 4
ROD_RS15205	COG3261	NADH dehydrogenase
ROD_RS15205	COG3262	NADH dehydrogenase (ubiquinone), 30 kDa subunit
ROD_RS15210	COG1143	NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient
ROD_RS15215	COG3260	NADH ubiquinone oxidoreductase 20
ROD_RS15225	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ROD_RS15245	COG2723	6-phospho-beta-galactosidase activity
ROD_RS15250	COG1263	PTS System
ROD_RS15250	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS15255	COG1609	Transcriptional regulator
ROD_RS15260	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS15265	COG0068	Along with HypE, it catalyzes the synthesis of the CN ligands of the active site iron of NiFe -hydrogenases using carbamoylphosphate as a substrate. It functions as a carbamoyl transferase using carbamoylphosphate as a substrate and transferring the carboxamido moiety in an ATP-dependent reaction to the thiolate of the C-terminal cysteine of HypE yielding a protein-S-carboxamide
ROD_RS15285	COG0794	Belongs to the SIS family. GutQ KpsF subfamily
ROD_RS15285	COG0517	IMP dehydrogenase activity
ROD_RS15290	COG1349	DNA-binding transcription factor activity
ROD_RS15295	COG4578	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS15300	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS15310	COG3732	PTS system glucitol sorbitol-specific
ROD_RS15315	COG3730	PTS system glucitol sorbitol-specific
ROD_RS15320	COG2951	lytic endotransglycosylase activity
ROD_RS15325	COG1546	Belongs to the CinA family
ROD_RS15350	COG1551	Could accelerate the degradation of some genes transcripts potentially through selective RNA binding
ROD_RS15385	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ROD_RS15390	COG1238	metal cluster binding
ROD_RS15405	COG2814	Major facilitator Superfamily
ROD_RS15410	COG1566	PFAM secretion protein HlyD family protein
ROD_RS15415	COG1846	Transcriptional regulator
ROD_RS15430	COG4176	ABC-type proline glycine betaine transport system permease component
ROD_RS15455	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ROD_RS15460	COG4575	ribosome binding
ROD_RS15480	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ROD_RS15485	COG0640	Transcriptional regulator
ROD_RS15490	COG0401	homolog of Blt101
ROD_RS15495	COG1652	LysM domain
ROD_RS15545	COG2188	Transcriptional regulator
ROD_RS15550	COG3711	transcriptional antiterminator
ROD_RS15550	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS15555	COG3414	Phosphotransferase system galactitol-specific IIB component
ROD_RS15560	COG3775	system Galactitol-specific IIC component
ROD_RS15570	COG0191	fructose-bisphosphate aldolase activity
ROD_RS15575	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS15585	COG3384	dioxygenase
ROD_RS15590	COG0583	DNA-binding transcription factor activity
ROD_RS15595	COG2120	A mycothiol (MSH, N-acetylcysteinyl-glucosaminyl- inositol) S-conjugate amidase, it recycles conjugated MSH to the N-acetyl cysteine conjugate (AcCys S-conjugate, a mercapturic acid) and the MSH precursor. Involved in MSH-dependent detoxification of a number of alkylating agents and antibiotics
ROD_RS15600	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ROD_RS15605	COG2828	Protein conserved in bacteria
ROD_RS15685	COG3436	PFAM IS66 Orf2 family protein
ROD_RS15690	COG4372	Transposase
ROD_RS15720	COG3423	Transcriptional regulator
ROD_RS15755	COG1309	transcriptional regulator
ROD_RS15770	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ROD_RS15775	COG1027	Aspartate ammonia-lyase
ROD_RS15785	COG3030	protein affecting phage T7 exclusion by the F plasmid
ROD_RS15790	COG0531	amino acid
ROD_RS15805	COG3344	reverse transcriptase
ROD_RS15830	COG5510	response to toxic substance
ROD_RS15840	COG2076	Multidrug Resistance protein
ROD_RS15860	COG0479	Belongs to the succinate dehydrogenase fumarate reductase iron-sulfur protein family
ROD_RS15865	COG1053	succinate dehydrogenase
ROD_RS15880	COG1511	domain protein
ROD_RS15880	COG3264	Mechanosensitive ion channel
ROD_RS15915	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
ROD_RS15920	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
ROD_RS15920	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
ROD_RS15925	COG0802	atpase or kinase
ROD_RS15950	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
ROD_RS15955	COG0330	HflC and HflK could
ROD_RS15960	COG0330	HflC and HflK could
ROD_RS15965	COG3242	Uncharacterized protein conserved in bacteria (DUF2065)
ROD_RS15980	COG0557	exoribonuclease II activity
ROD_RS15985	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ROD_RS15990	COG1960	acyl-CoA dehydrogenase activity
ROD_RS16000	COG3650	response to hydrogen peroxide
ROD_RS16005	COG1073	alpha beta
ROD_RS16070	COG0238	Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit
ROD_RS16085	COG3061	Opacity-associated protein A
ROD_RS16090	COG0545	Peptidyl-prolyl cis-trans isomerase
ROD_RS16095	COG1113	amino acid transport
ROD_RS16105	COG0840	transmembrane signaling receptor activity
ROD_RS16110	COG0697	spore germination
ROD_RS16115	COG0702	epimerase
ROD_RS16120	COG1733	regulation of RNA biosynthetic process
ROD_RS16135	COG3054	Bacterial protein of unknown function (YtfJ_HI0045)
ROD_RS16145	COG1253	flavin adenine dinucleotide binding
ROD_RS16150	COG2211	Major facilitator Superfamily
ROD_RS16155	COG0673	inositol 2-dehydrogenase activity
ROD_RS16170	COG0673	inositol 2-dehydrogenase activity
ROD_RS16185	COG0729	surface antigen
ROD_RS16190	COG2911	Protein conserved in bacteria
ROD_RS16195	COG2105	PFAM AIG2 family protein
ROD_RS16200	COG2336	PFAM SpoVT AbrB
ROD_RS16205	COG2337	Toxic component of a toxin-antitoxin (TA) module
ROD_RS16215	COG1879	ABC-type sugar transport system periplasmic component
ROD_RS16220	COG1129	ABC transporter
ROD_RS16225	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS16230	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS16235	COG0840	transmembrane signaling receptor activity
ROD_RS16245	COG0773	UDP-N-acetylmuramate-L-alanine ligase activity
ROD_RS16255	COG0312	modulator of DNA gyrase
ROD_RS16295	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS16300	COG3964	amidohydrolase
ROD_RS16315	COG3711	transcriptional antiterminator
ROD_RS16315	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS16320	COG0602	queuosine metabolic process
ROD_RS16335	COG0366	Alpha amylase catalytic
ROD_RS16340	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
ROD_RS16340	COG1263	PTS System
ROD_RS16375	COG1438	arginine binding
ROD_RS16380	COG2731	YhcH YjgK YiaL family protein
ROD_RS16385	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ROD_RS16410	COG2927	DNA polymerase III (CHI subunit)
ROD_RS16420	COG0795	lipopolysaccharide-transporting ATPase activity
ROD_RS16425	COG0795	lipopolysaccharide-transporting ATPase activity
ROD_RS16430	COG0433	COG0433 Predicted ATPase
ROD_RS16435	COG1064	alcohol dehydrogenase
ROD_RS16460	COG4227	nucleotidyltransferase activity
ROD_RS16475	COG1195	it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP
ROD_RS16490	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ROD_RS16620	COG3177	Filamentation induced by cAMP protein fic
ROD_RS16640	COG0305	Participates in initiation and elongation during chromosome replication
ROD_RS16650	COG2894	cell division
ROD_RS16655	COG0582	viral genome integration into host DNA
ROD_RS16665	COG2801	Transposase and inactivated derivatives
ROD_RS16700	COG2068	MobA-Related Protein
ROD_RS16705	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS16710	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS16715	COG2233	PERMEase
ROD_RS16720	COG0493	'glutamate synthase
ROD_RS16720	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS16725	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS16730	COG0402	S-adenosylhomocysteine deaminase activity
ROD_RS16735	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS16735	COG0493	'glutamate synthase
ROD_RS16740	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
ROD_RS16740	COG3608	succinylglutamate desuccinylase aspartoacylase
ROD_RS16745	COG0549	Belongs to the carbamate kinase family
ROD_RS16755	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ROD_RS16760	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ROD_RS16765	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
ROD_RS16770	COG3829	transcription factor binding
ROD_RS16775	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
ROD_RS16780	COG2227	3-demethylubiquinone-9 3-O-methyltransferase activity
ROD_RS16785	COG3811	Belongs to the UPF0386 family
ROD_RS16795	COG0071	Belongs to the small heat shock protein (HSP20) family
ROD_RS16875	COG0286	site-specific DNA-methyltransferase (adenine-specific) activity
ROD_RS16905	COG4372	Transposase
ROD_RS16910	COG3436	PFAM IS66 Orf2 family protein
ROD_RS16920	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
ROD_RS16925	COG4772	TonB-dependent receptor
ROD_RS16930	COG3712	iron ion homeostasis
ROD_RS16935	COG1595	DNA-templated transcription, initiation
ROD_RS16940	COG0243	molybdopterin cofactor binding
ROD_RS16945	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS16950	COG3302	dmso reductase anchor subunit
ROD_RS16970	COG4943	cyclic-guanylate-specific phosphodiesterase activity
ROD_RS16990	COG2252	PERMEase
ROD_RS16995	COG0025	NhaP-type Na H and K H
ROD_RS17000	COG0583	DNA-binding transcription factor activity
ROD_RS17005	COG0673	inositol 2-dehydrogenase activity
ROD_RS17025	COG3162	membrane
ROD_RS17040	COG3303	Catalyzes the reduction of nitrite to ammonia, consuming six electrons in the process
ROD_RS17045	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS17050	COG3301	Polysulphide reductase, NrfD
ROD_RS17055	COG1138	Cytochrome C-type biogenesis protein
ROD_RS17060	COG3088	subunit of a heme lyase
ROD_RS17065	COG4235	cytochrome complex assembly
ROD_RS17070	COG1301	dicarboxylic acid transport
ROD_RS17075	COG0790	COG0790 FOG TPR repeat, SEL1 subfamily
ROD_RS17080	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS17085	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS17090	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS17095	COG1940	carbohydrate kinase activity
ROD_RS17100	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ROD_RS17105	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS17110	COG1129	ABC transporter
ROD_RS17115	COG1879	ABC-type sugar transport system periplasmic component
ROD_RS17120	COG1737	Transcriptional regulator
ROD_RS17125	COG0698	ribose 5-phosphate isomerase
ROD_RS17145	COG2824	Alkylphosphonate utilization operon protein PhnA
ROD_RS17175	COG0745	RESPONSE REGULATOR receiver
ROD_RS17185	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ROD_RS17185	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ROD_RS17190	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ROD_RS17195	COG4565	transcriptional regulatory protein
ROD_RS17200	COG3290	protein histidine kinase activity
ROD_RS17205	COG2215	Belongs to the NiCoT transporter (TC 2.A.52) family
ROD_RS17215	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS17220	COG3302	dmso reductase anchor subunit
ROD_RS17225	COG3381	protein complex oligomerization
ROD_RS17235	COG3539	Fimbrial protein
ROD_RS17245	COG3188	usher protein
ROD_RS17250	COG3121	Chaperone
ROD_RS17260	COG3539	Fimbrial protein
ROD_RS17265	COG3539	Fimbrial protein
ROD_RS17290	COG1132	(ABC) transporter
ROD_RS17295	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ROD_RS17300	COG1136	(ABC) transporter
ROD_RS17300	COG0577	efflux transmembrane transporter activity
ROD_RS17305	COG1538	Outer membrane efflux protein
ROD_RS17310	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ROD_RS17325	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS17395	COG3436	PFAM IS66 Orf2 family protein
ROD_RS17400	COG4372	Transposase
ROD_RS17420	COG0754	glutathionylspermidine amidase activity
ROD_RS17430	COG0298	carbon dioxide binding
ROD_RS17440	COG1773	rubredoxin
ROD_RS17445	COG0680	Initiates the rapid degradation of small, acid-soluble proteins during spore germination
ROD_RS17450	COG0374	Belongs to the NiFe NiFeSe hydrogenase large subunit family
ROD_RS17455	COG5557	Pfam Polysulphide reductase, NrfD
ROD_RS17460	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS17465	COG1740	oxidoreductase activity, acting on hydrogen as donor, iron-sulfur protein as acceptor
ROD_RS17475	COG0667	Aldo Keto reductase
ROD_RS17500	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS17505	COG0848	biopolymer transport protein
ROD_RS17525	COG0586	Pfam SNARE associated Golgi protein
ROD_RS17535	COG1979	alcohol dehydrogenase
ROD_RS17540	COG0656	L-ascorbic acid biosynthetic process
ROD_RS17570	COG3111	PFAM Bacterial OB fold (BOF) protein
ROD_RS17580	COG0642	Histidine kinase
ROD_RS17585	COG2249	NAD(P)H dehydrogenase (quinone) activity
ROD_RS17590	COG1359	(4S)-4-hydroxy-5-phosphonooxypentane-2,3-dione isomerase activity
ROD_RS17595	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
ROD_RS17600	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ROD_RS17625	COG3150	esterase
ROD_RS17630	COG1409	Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes
ROD_RS17635	COG3151	Protein conserved in bacteria
ROD_RS17640	COG0494	nUDIX hydrolase
ROD_RS17645	COG1538	Outer membrane efflux protein
ROD_RS17655	COG0754	glutathionylspermidine amidase activity
ROD_RS17660	COG3384	dioxygenase
ROD_RS17705	COG1585	Membrane protein implicated in regulation of membrane protease activity
ROD_RS17710	COG2268	Band 7 protein
ROD_RS17725	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS17730	COG3025	triphosphatase activity
ROD_RS17735	COG4991	sh3 domain protein
ROD_RS17755	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
ROD_RS17770	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
ROD_RS17775	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
ROD_RS17780	COG0471	metal ion transport
ROD_RS17825	COG0828	Belongs to the bacterial ribosomal protein bS21 family
ROD_RS17830	COG0358	DNA primase activity
ROD_RS17860	COG3436	PFAM IS66 Orf2 family protein
ROD_RS17865	COG4372	Transposase
ROD_RS17875	COG0589	response to stress
ROD_RS17910	COG2315	Protein conserved in bacteria
ROD_RS17915	COG0432	Pfam Uncharacterised protein family UPF0047
ROD_RS17920	COG3700	Belongs to the class B bacterial acid phosphatase family
ROD_RS17925	COG1448	Aminotransferase
ROD_RS17930	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
ROD_RS17935	COG0305	Participates in initiation and elongation during chromosome replication
ROD_RS17950	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ROD_RS18015	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ROD_RS18035	COG5301	cellulose 1,4-beta-cellobiosidase activity
ROD_RS18115	COG4695	Portal protein
ROD_RS18210	COG4974	Belongs to the 'phage' integrase family
ROD_RS18220	COG0735	belongs to the Fur family
ROD_RS18225	COG3237	CsbD-like
ROD_RS18230	COG0534	Mate efflux family protein
ROD_RS18240	COG0818	Recycling of diacylglycerol produced during the turnover of membrane phospholipid
ROD_RS18290	COG0477	Major facilitator Superfamily
ROD_RS18290	COG2814	Major facilitator Superfamily
ROD_RS18295	COG2188	Transcriptional regulator
ROD_RS18305	COG0673	inositol 2-dehydrogenase activity
ROD_RS18310	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ROD_RS18315	COG1447	Phosphotransferase system cellobiose-specific component IIA
ROD_RS18320	COG3223	Belongs to the PsiE family
ROD_RS18325	COG4775	Part of the outer membrane protein assembly complex, which is involved in assembly and insertion of beta-barrel proteins into the outer membrane
ROD_RS18350	COG0527	aspartate kinase activity
ROD_RS18355	COG3541	Predicted nucleotidyltransferase
ROD_RS18360	COG1690	Belongs to the RtcB family
ROD_RS18365	COG4650	regulator
ROD_RS18380	COG1187	pseudouridine synthase activity
ROD_RS18385	COG3272	Protein of unknown function (DUF1722)
ROD_RS18405	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS18410	COG1410	methionine synthase
ROD_RS18410	COG0646	methionine synthase
ROD_RS18435	COG2225	Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl-CoA) and glyoxylate to form malate and CoA
ROD_RS18445	COG0456	acetyltransferase
ROD_RS18475	COG0151	Belongs to the GarS family
ROD_RS18480	COG2204	response regulator
ROD_RS18485	COG4191	Histidine kinase
ROD_RS18490	COG3678	ATP-independent chaperone mediated protein folding
ROD_RS18510	COG1515	deoxyribonuclease V activity
ROD_RS18540	COG0476	Involved in molybdopterin and thiamine biosynthesis, family 2
ROD_RS18545	COG2104	thiamine diphosphate biosynthetic process
ROD_RS18590	COG0250	Participates in transcription elongation, termination and antitermination
ROD_RS18595	COG0690	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ROD_RS18640	COG0812	UDP-N-acetylmuramate dehydrogenase activity
ROD_RS18675	COG4206	TonB-dependent receptor
ROD_RS18700	COG0583	DNA-binding transcription factor activity
ROD_RS18720	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
ROD_RS18730	COG2194	sulfuric ester hydrolase activity
ROD_RS18740	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS18745	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ROD_RS18750	COG1882	Formate acetyltransferase
ROD_RS18755	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS18760	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
ROD_RS18765	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS18765	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
ROD_RS18765	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS18775	COG0371	Dehydrogenase
ROD_RS18785	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
ROD_RS18795	COG0527	aspartate kinase activity
ROD_RS18795	COG0460	homoserine dehydrogenase
ROD_RS18800	COG0626	cystathionine gamma-synthase activity
ROD_RS18830	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
ROD_RS18835	COG1609	Transcriptional regulator
ROD_RS18840	COG3087	Lytic transglycosylase with a strong preference for naked glycan strands that lack stem peptides
ROD_RS18855	COG1575	Belongs to the MenA family. Type 1 subfamily
ROD_RS18880	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
ROD_RS18890	COG1494	fructose-1,6-bisphosphatase
ROD_RS18905	COG3152	Membrane
ROD_RS18940	COG1613	Sulfate ABC transporter periplasmic sulfate-binding protein
ROD_RS18960	COG3678	ATP-independent chaperone mediated protein folding
ROD_RS18965	COG0745	RESPONSE REGULATOR receiver
ROD_RS18970	COG2205	protein histidine kinase activity
ROD_RS18975	COG2258	MOSC domain
ROD_RS19020	COG1454	alcohol dehydrogenase
ROD_RS19040	COG1296	Branched-chain amino acid permease (Azaleucine resistance)
ROD_RS19060	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ROD_RS19070	COG3715	PTS system
ROD_RS19075	COG3716	PTS system mannose fructose sorbose family IID component
ROD_RS19090	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS19090	COG0243	molybdopterin cofactor binding
ROD_RS19095	COG0243	molybdopterin cofactor binding
ROD_RS19095	COG3383	formate dehydrogenase (NAD+) activity
ROD_RS19100	COG0437	4 iron, 4 sulfur cluster binding
ROD_RS19105	COG2864	formate dehydrogenase
ROD_RS19120	COG3905	.,Oxidizes proline to glutamate for use as a carbon and nitrogen source
ROD_RS19140	COG0456	acetyltransferase
ROD_RS19155	COG1011	Hydrolase
ROD_RS19165	COG1349	DNA-binding transcription factor activity
ROD_RS19170	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS19180	COG3684	Belongs to the aldolase LacD family
ROD_RS19190	COG2017	converts alpha-aldose to the beta-anomer
ROD_RS19200	COG3436	PFAM IS66 Orf2 family protein
ROD_RS19205	COG4372	Transposase
ROD_RS19215	COG1501	Belongs to the glycosyl hydrolase 31 family
ROD_RS19225	COG2211	Major facilitator Superfamily
ROD_RS19235	COG0174	glutamine synthetase
ROD_RS19240	COG3852	Histidine kinase
ROD_RS19250	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ROD_RS19275	COG0204	Acyl-transferase
ROD_RS19290	COG3084	Protein conserved in bacteria
ROD_RS19295	COG0746	molybdenum cofactor guanylyltransferase activity
ROD_RS19300	COG1763	Mo-molybdopterin cofactor biosynthetic process
ROD_RS19330	COG4635	menaquinone-dependent protoporphyrinogen oxidase activity
ROD_RS19340	COG1739	Uncharacterized protein family UPF0029
ROD_RS19360	COG0543	2 iron, 2 sulfur cluster binding
ROD_RS19375	COG0084	hydrolase, TatD family'
ROD_RS19380	COG0805	protein transport
ROD_RS19390	COG1826	Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes
ROD_RS19400	COG3165	ubiquinone biosynthetic process from chorismate
ROD_RS19410	COG1322	Protein conserved in bacteria
ROD_RS19415	COG2820	Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1- phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis
ROD_RS19420	COG0412	Dienelactone hydrolase
ROD_RS19435	COG0697	spore germination
ROD_RS19440	COG0561	phosphatase activity
ROD_RS19445	COG2267	carboxylic ester hydrolase activity
ROD_RS19450	COG1280	lysine exporter protein (LysE YggA)
ROD_RS19455	COG1280	lysine exporter protein (LysE YggA)
ROD_RS19480	COG3547	Transposase (IS116 IS110 IS902 family)
ROD_RS19495	COG1011	Hydrolase
ROD_RS19500	COG4973	Belongs to the 'phage' integrase family. XerC subfamily
ROD_RS19515	COG5567	small periplasmic lipoprotein
ROD_RS19540	COG2959	enzyme of heme biosynthesis
ROD_RS19545	COG3071	HemY protein
ROD_RS19590	COG2244	polysaccharide biosynthetic process
ROD_RS19595	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
ROD_RS19600	COG0456	acetyltransferase
ROD_RS19605	COG1209	Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis
ROD_RS19610	COG1088	dTDP-glucose 4,6-dehydratase activity
ROD_RS19615	COG0677	UDP-N-acetyl-D-mannosamine dehydrogenase activity
ROD_RS19630	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
ROD_RS19635	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
ROD_RS19640	COG3118	belongs to the thioredoxin family
ROD_RS19660	COG3835	regulator
ROD_RS19665	COG2610	gluconate transmembrane transporter activity
ROD_RS19670	COG1929	Belongs to the glycerate kinase type-1 family
ROD_RS19675	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
ROD_RS19685	COG0583	DNA-binding transcription factor activity
ROD_RS19690	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
ROD_RS19700	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
ROD_RS19705	COG3978	acetolactate synthase activity
ROD_RS19720	COG0606	chelatase, subunit chli
ROD_RS19725	COG3085	chromosome segregation
ROD_RS19765	COG2186	Transcriptional regulator
ROD_RS19770	COG0477	Major facilitator Superfamily
ROD_RS19775	COG1609	Transcriptional regulator
ROD_RS19780	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS19785	COG1879	ABC-type sugar transport system periplasmic component
ROD_RS19790	COG1172	Belongs to the binding-protein-dependent transport system permease family
ROD_RS19795	COG1129	ABC transporter
ROD_RS19800	COG1869	D-ribose catabolic process
ROD_RS19825	COG1522	sequence-specific DNA binding
ROD_RS19830	COG0716	FMN binding
ROD_RS19845	COG3312	ion transport
ROD_RS19905	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
ROD_RS19910	COG0573	inorganic phosphate transmembrane transporter activity
ROD_RS19915	COG0581	inorganic phosphate transmembrane transporter activity
ROD_RS19920	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
ROD_RS19925	COG0704	Plays a role in the regulation of phosphate uptake
ROD_RS19930	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
ROD_RS19935	COG2252	PERMEase
ROD_RS19940	COG0431	NADPH-dependent FMN reductase
ROD_RS19945	COG2091	lysine biosynthetic process via aminoadipic acid
ROD_RS19985	COG0592	DNA-directed DNA polymerase activity
ROD_RS20000	COG0561	phosphatase activity
ROD_RS20005	COG2186	Transcriptional regulator
ROD_RS20010	COG3734	2-keto-3-deoxy-galactonokinase
ROD_RS20015	COG0800	Aldolase
ROD_RS20025	COG2271	Major facilitator Superfamily
ROD_RS20035	COG0823	Involved in the tonB-independent uptake of proteins
ROD_RS20040	COG5645	(Lipo)protein
ROD_RS20060	COG2188	Transcriptional regulator
ROD_RS20065	COG2188	Transcriptional regulator
ROD_RS20080	COG2207	Transcriptional regulator
ROD_RS20085	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
ROD_RS20090	COG3119	arylsulfatase activity
ROD_RS20100	COG2149	membrane
ROD_RS20110	COG0641	radical SAM
ROD_RS20120	COG2610	gluconate transmembrane transporter activity
ROD_RS20125	COG0583	DNA-binding transcription factor activity
ROD_RS20130	COG2814	Major facilitator Superfamily
ROD_RS20150	COG0028	Belongs to the TPP enzyme family
ROD_RS20155	COG0440	acetolactate synthase activity
ROD_RS20160	COG2197	response regulator
ROD_RS20190	COG3436	PFAM IS66 Orf2 family protein
ROD_RS20195	COG4372	Transposase
ROD_RS20215	COG1388	LysM domain
ROD_RS20215	COG1470	cell adhesion involved in biofilm formation
ROD_RS20290	COG4580	involved in the transport of maltose and maltodextrins
ROD_RS20295	COG1447	Phosphotransferase system cellobiose-specific component IIA
ROD_RS20300	COG2723	6-phospho-beta-galactosidase activity
ROD_RS20305	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
ROD_RS20315	COG1609	Transcriptional regulator
ROD_RS20330	COG0697	spore germination
ROD_RS20375	COG2197	response regulator
ROD_RS20410	COG4964	Belongs to the GSP D family
ROD_RS20495	COG2211	Major facilitator Superfamily
ROD_RS20500	COG1501	Belongs to the glycosyl hydrolase 31 family
ROD_RS20505	COG2982	Protein involved in outer membrane biogenesis
ROD_RS20510	COG2233	PERMEase
ROD_RS20515	COG0786	glutamate:sodium symporter activity
ROD_RS20520	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
ROD_RS20525	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
ROD_RS20530	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
ROD_RS20555	COG1561	YicC-like family, N-terminal region
ROD_RS20580	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
ROD_RS20615	COG1519	Transferase
ROD_RS20620	COG0859	PFAM glycosyl transferase family 9
ROD_RS20625	COG0438	transferase activity, transferring glycosyl groups
ROD_RS20630	COG0515	serine threonine protein kinase
ROD_RS20635	COG0438	transferase activity, transferring glycosyl groups
ROD_RS20635	COG4641	Protein conserved in bacteria
ROD_RS20640	COG0438	transferase activity, transferring glycosyl groups
ROD_RS20645	COG1442	glycosyl transferase family 8
ROD_RS20650	COG1442	glycosyl transferase family 8
ROD_RS20655	COG3642	lipopolysaccharide core region biosynthetic process
ROD_RS20675	COG0859	PFAM glycosyl transferase family 9
ROD_RS20680	COG0859	PFAM glycosyl transferase family 9
ROD_RS20690	COG0156	8-amino-7-oxononanoate synthase activity
ROD_RS20700	COG1216	Glycosyl transferase, family 2
ROD_RS20705	COG2861	carbohydrate metabolic process
ROD_RS20710	COG4942	peptidase
ROD_RS20720	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
ROD_RS20725	COG0695	Has a glutathione-disulfide oxidoreductase activity in the presence of NADPH and glutathione reductase. Reduces low molecular weight disulfides and proteins
ROD_RS20745	COG2271	Major facilitator Superfamily
ROD_RS20755	COG1609	Transcriptional regulator
ROD_RS20760	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
ROD_RS20770	COG2186	Transcriptional regulator
ROD_RS20790	COG3722	fumarate hydratase activity
ROD_RS20800	COG4668	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS20800	COG2213	PTS system mannitol-specific
ROD_RS20810	COG1566	PFAM secretion protein HlyD family protein
ROD_RS20815	COG0625	glutathione transferase activity
ROD_RS20825	COG3276	selenocysteine insertion sequence binding
ROD_RS20830	COG1454	alcohol dehydrogenase
ROD_RS20835	COG1940	carbohydrate kinase activity
ROD_RS20840	COG1012	belongs to the aldehyde dehydrogenase family
ROD_RS20850	COG2211	Major facilitator Superfamily
ROD_RS20865	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
ROD_RS20870	COG3977	Valine--pyruvate aminotransferase
ROD_RS20875	COG0366	Alpha amylase catalytic
ROD_RS20880	COG2992	FlgJ-related protein
ROD_RS20885	COG2207	Transcriptional regulator
ROD_RS20885	COG1609	Transcriptional regulator
ROD_RS20895	COG1070	Carbohydrate kinase
ROD_RS20900	COG4682	membrane
ROD_RS20905	COG3274	enterobacterial common antigen metabolic process
ROD_RS20920	COG0751	glycine-tRNA ligase activity
ROD_RS20935	COG1278	Cold shock
ROD_RS20940	COG2944	sequence-specific DNA binding
ROD_RS20945	COG2814	Major facilitator Superfamily
ROD_RS20960	COG2885	chlorophyll binding
ROD_RS20965	COG0243	molybdopterin cofactor binding
ROD_RS20970	COG0456	acetyltransferase
ROD_RS20980	COG5571	outer membrane autotransporter
ROD_RS20990	COG2223	nitrite transmembrane transporter activity
ROD_RS21000	COG2194	sulfuric ester hydrolase activity
ROD_RS21015	COG0747	negative chemotaxis
ROD_RS21020	COG0601	transmembrane transport
ROD_RS21025	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ROD_RS21030	COG0444	Belongs to the ABC transporter superfamily
ROD_RS21035	COG4608	Belongs to the ABC transporter superfamily
ROD_RS21040	COG0814	amino acid
ROD_RS21080	COG1215	transferase activity, transferring glycosyl groups
ROD_RS21085	COG3405	Belongs to the glycosyl hydrolase 8 (cellulase D) family
ROD_RS21090	COG0457	Tetratricopeptide repeat
ROD_RS21090	COG3118	belongs to the thioredoxin family
ROD_RS21095	COG2200	EAL domain
ROD_RS21095	COG2199	diguanylate cyclase activity
ROD_RS21105	COG0612	Peptidase, M16
ROD_RS21110	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS21115	COG2200	EAL domain
ROD_RS21120	COG2982	Protein involved in outer membrane biogenesis
ROD_RS21125	COG0477	Major facilitator Superfamily
ROD_RS21130	COG1295	ribonuclease BN
ROD_RS21135	COG0583	DNA-binding transcription factor activity
ROD_RS21150	COG2197	response regulator
ROD_RS21165	COG1858	cytochrome C peroxidase
ROD_RS21170	COG2188	Transcriptional regulator
ROD_RS21175	COG2222	sugar isomerase
ROD_RS21180	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
ROD_RS21185	COG2704	Responsible for the transport of C4-dicarboxylates from the periplasm across the inner membrane
ROD_RS21195	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
ROD_RS21200	COG2961	Specifically methylates the adenine in position 2030 of 23S rRNA
ROD_RS21205	COG0339	signal peptide processing
ROD_RS21225	COG0589	response to stress
ROD_RS21235	COG0306	phosphate transporter
ROD_RS21240	COG2081	HI0933 family
ROD_RS21255	COG3964	amidohydrolase
ROD_RS21260	COG0471	metal ion transport
ROD_RS21265	COG0684	Catalyzes the aldol cleavage of 4-hydroxy-4-methyl-2- oxoglutarate (HMG) into 2 molecules of pyruvate. Also contains a secondary oxaloacetate (OAA) decarboxylase activity due to the common pyruvate enolate transition state formed following C-C bond cleavage in the retro-aldol and decarboxylation reactions
ROD_RS21270	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ROD_RS21290	COG1124	(ABC) transporter
ROD_RS21295	COG0444	Belongs to the ABC transporter superfamily
ROD_RS21300	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
ROD_RS21305	COG0601	transmembrane transport
ROD_RS21310	COG0747	negative chemotaxis
ROD_RS21320	COG3479	Phenolic acid decarboxylase
ROD_RS21325	COG2091	lysine biosynthetic process via aminoadipic acid
ROD_RS21330	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ROD_RS21335	COG1028	Short-chain dehydrogenase reductase Sdr
ROD_RS21345	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
ROD_RS21390	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
ROD_RS21420	COG0628	permease
ROD_RS21435	COG1738	Involved in the import of queuosine (Q) precursors, required for Q precursor salvage
ROD_RS21445	COG3157	Type VI secretion system effector, Hcp
ROD_RS21455	COG1638	TRAP-type C4-dicarboxylate transport system periplasmic component
ROD_RS21475	COG3714	YhhN family
ROD_RS21485	COG3776	membrane
ROD_RS21490	COG0742	ribosomal rna small subunit methyltransferase
ROD_RS21495	COG0552	protein localization to endoplasmic reticulum
ROD_RS21500	COG2884	Cell division ATP-binding protein ftsE
ROD_RS21505	COG2177	Part of the ABC transporter FtsEX involved in
ROD_RS21520	COG0160	Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family
ROD_RS21530	COG0683	leucine binding
ROD_RS21550	COG4177	L-phenylalanine transmembrane transporter activity
ROD_RS21555	COG0411	ABC transporter
ROD_RS21560	COG0410	ABC transporter
ROD_RS21595	COG0584	glycerophosphoryl diester phosphodiesterase
ROD_RS21605	COG0405	Gamma-glutamyltransferase
ROD_RS21620	COG1247	-acetyltransferase
ROD_RS21625	COG0673	inositol 2-dehydrogenase activity
ROD_RS21630	COG1741	Belongs to the pirin family
ROD_RS21635	COG1609	Transcriptional regulator
ROD_RS21640	COG3265	gluconokinase activity
ROD_RS21645	COG2610	gluconate transmembrane transporter activity
ROD_RS21650	COG2095	MarC family integral membrane protein
ROD_RS21655	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
ROD_RS21680	COG0058	SHG alpha-glucan phosphorylase activity
ROD_RS21685	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
ROD_RS21700	COG1349	DNA-binding transcription factor activity
ROD_RS21725	COG0058	SHG alpha-glucan phosphorylase activity
ROD_RS21730	COG1640	4-alpha-glucanotransferase
ROD_RS21735	COG2610	gluconate transmembrane transporter activity
ROD_RS21755	COG5464	transposase or invertase
ROD_RS21770	COG1918	ferrous iron import across plasma membrane
ROD_RS21775	COG2183	response to ionizing radiation
ROD_RS21780	COG0782	Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus
ROD_RS21805	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
ROD_RS21810	COG1011	Hydrolase
ROD_RS21820	COG0494	nUDIX hydrolase
ROD_RS21825	COG5009	serine-type D-Ala-D-Ala carboxypeptidase activity
ROD_RS21830	COG4972	Pilus assembly protein
ROD_RS21850	COG4796	Type ii and iii secretion system protein
ROD_RS21865	COG3266	domain, Protein
ROD_RS21870	COG0338	D12 class N6 adenine-specific DNA methyltransferase
ROD_RS21875	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
ROD_RS21885	COG0180	Tryptophanyl-tRNA synthetase
ROD_RS21905	COG2146	nitrite reductase [NAD(P)H] activity
ROD_RS21910	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
ROD_RS21940	COG4992	N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity
ROD_RS21945	COG1289	transmembrane transporter activity
ROD_RS21955	COG1765	OsmC-like protein
ROD_RS21960	COG3954	Phosphoribulokinase
ROD_RS21970	COG0429	hydrolase of the alpha beta-hydrolase fold
ROD_RS22000	COG0679	Auxin Efflux Carrier
ROD_RS22010	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
ROD_RS22020	COG0488	(ABC) transporter
ROD_RS22035	COG3529	nucleic-acid-binding protein containing a Zn-ribbon domain
ROD_RS22040	COG1047	Peptidyl-prolyl cis-trans
ROD_RS22050	COG0545	Peptidyl-prolyl cis-trans isomerase
ROD_RS22055	COG2964	Protein conserved in bacteria
ROD_RS22095	COG3979	chitinase
ROD_RS22140	COG3156	type II secretion system protein K
ROD_RS22145	COG4795	General secretion pathway protein
ROD_RS22155	COG2165	general secretion pathway protein
ROD_RS22160	COG2165	general secretion pathway protein
ROD_RS22165	COG1459	type II secretion system
ROD_RS22170	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ROD_RS22175	COG1450	Type ii and iii secretion system protein
ROD_RS22180	COG3031	protein transport across the cell outer membrane
ROD_RS22195	COG0051	transcription antitermination factor activity, RNA binding
ROD_RS22300	COG0201	protein transport
ROD_RS22330	COG0203	ribosomal protein L17
ROD_RS22340	COG0789	Transcriptional regulator
ROD_RS22345	COG3036	rescue of stalled ribosome
ROD_RS22375	COG0758	DNA mediated transformation
ROD_RS22385	COG0551	DNA topoisomerase type I activity
ROD_RS22405	COG0663	COG0663 Carbonic anhydrases acetyltransferases, isoleucine patch superfamily
ROD_RS22445	COG1126	abc transporter atp-binding protein
ROD_RS22450	COG0765	amino acid transport
ROD_RS22455	COG4597	amino acid ABC transporter
ROD_RS22460	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
ROD_RS22470	COG0841	Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
ROD_RS22475	COG0845	Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family
ROD_RS22485	COG1309	transcriptional regulator
ROD_RS22495	COG2189	Belongs to the N(4) N(6)-methyltransferase family
ROD_RS22505	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
ROD_RS22515	COG4145	pantothenate transmembrane transporter activity
ROD_RS22520	COG3924	membrane
ROD_RS22525	COG0439	Biotin carboxylase
ROD_RS22530	COG0511	ligase activity, forming carbon-carbon bonds
ROD_RS22545	COG0604	alcohol dehydrogenase
ROD_RS22550	COG2200	EAL domain
ROD_RS22550	COG2199	diguanylate cyclase activity
ROD_RS22560	COG1077	Cell shape determining protein MreB Mrl
ROD_RS22565	COG1792	Involved in formation and maintenance of cell shape
ROD_RS22570	COG2891	Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins
ROD_RS22585	COG3164	Protein of unknown function
ROD_RS22590	COG0312	modulator of DNA gyrase
ROD_RS22595	COG0583	DNA-binding transcription factor activity
ROD_RS22620	COG2732	(Barnase) inhibitor
ROD_RS22630	COG4372	Transposase
ROD_RS22635	COG3436	PFAM IS66 Orf2 family protein
ROD_RS22670	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
ROD_RS22675	COG3105	Protein conserved in bacteria
ROD_RS22680	COG1485	Reduces the stability of FtsZ polymers in the presence of ATP
ROD_RS22695	COG0625	glutathione transferase activity
ROD_RS22700	COG2969	positive regulation of protein catabolic process
ROD_RS22705	COG2186	Transcriptional regulator
ROD_RS22730	COG2731	YhcH YjgK YiaL family protein
ROD_RS22735	COG0402	S-adenosylhomocysteine deaminase activity
ROD_RS22740	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
ROD_RS22745	COG0493	'glutamate synthase
ROD_RS22750	COG0069	glutamate synthase activity
ROD_RS22750	COG0067	glutamate synthase
ROD_RS22750	COG0070	glutamate synthase
ROD_RS22755	COG1242	4 iron, 4 sulfur cluster binding
ROD_RS22760	COG2271	Major facilitator Superfamily
ROD_RS22765	COG1063	alcohol dehydrogenase
ROD_RS22770	COG1312	Catalyzes the dehydration of D-mannonate
ROD_RS22775	COG5002	protein histidine kinase activity
ROD_RS22775	COG0784	Response regulator, receiver
ROD_RS22775	COG2198	Histidine kinase
ROD_RS22780	COG3155	Displays glyoxalase activity, catalyzing the conversion of glyoxal to glycolate
ROD_RS22790	COG0515	serine threonine protein kinase
ROD_RS22795	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS22820	COG1137	ATPase activity
ROD_RS22825	COG1934	Involved in the assembly of lipopolysaccharide (LPS). Required for the translocation of LPS from the inner membrane to the outer membrane. May form a bridge between the inner membrane and the outer membrane, via interactions with LptC and LptD, thereby facilitating LPS transfer across the periplasm
ROD_RS22830	COG3117	lipopolysaccharide transmembrane transporter activity
ROD_RS22835	COG1778	Involved in the biosynthesis of lipopolysaccharides (LPSs). Catalyzes the hydrolysis of 3-deoxy-D-manno-octulosonate 8-phosphate (KDO 8-P) to 3-deoxy-D-manno-octulosonate (KDO) and inorganic phosphate
ROD_RS22845	COG0530	calcium, potassium:sodium antiporter activity
ROD_RS22850	COG1127	ABC transporter
ROD_RS22855	COG0767	ABC-type transport system involved in resistance to organic solvents, permease component
ROD_RS22860	COG1463	ABC-type transport system involved in resistance to organic solvents, periplasmic component
ROD_RS22865	COG2854	intermembrane phospholipid transfer
ROD_RS22870	COG3113	response to antibiotic
ROD_RS22875	COG5007	Belongs to the BolA IbaG family
ROD_RS22885	COG3423	Transcriptional regulator
ROD_RS22890	COG0142	geranyltranstransferase activity
ROD_RS22905	COG0697	spore germination
ROD_RS22920	COG2027	D-alanyl-D-alanine carboxypeptidase
ROD_RS22935	COG1534	Rna-binding protein
ROD_RS22945	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
ROD_RS22950	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
ROD_RS22995	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
ROD_RS23000	COG1459	type II secretion system
ROD_RS23020	COG1314	P-P-bond-hydrolysis-driven protein transmembrane transporter activity
ROD_RS23050	COG0195	Participates in both transcription termination and antitermination
ROD_RS23085	COG0513	Belongs to the DEAD box helicase family
ROD_RS23090	COG0814	amino acid
ROD_RS23095	COG2141	COG2141 Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
ROD_RS23100	COG0826	peptidase U32
ROD_RS23105	COG0826	peptidase U32
ROD_RS23110	COG3154	lipid carrier protein
ROD_RS23115	COG3153	acetyltransferase
ROD_RS23130	COG0693	protein deglycase activity
ROD_RS23135	COG0702	epimerase
ROD_RS23140	COG0701	Predicted permease
ROD_RS23145	COG2823	Periplasmic or secreted lipoprotein
ROD_RS23165	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
ROD_RS23175	COG1063	alcohol dehydrogenase
ROD_RS23195	COG2842	Transposition protein
ROD_RS23225	COG4396	Host-nuclease inhibitor protein Gam
ROD_RS23310	COG4373	Mu-like prophage FluMu protein gp28
ROD_RS23315	COG4383	Mu-like prophage protein gp29
ROD_RS23320	COG2369	cell adhesion
ROD_RS23325	COG5005	Phage virion morphogenesis
ROD_RS23330	COG4388	Caudovirus prohead serine protease
ROD_RS23335	COG4397	Mu-like prophage major head subunit gpT
ROD_RS23360	COG4386	tail sheath protein
ROD_RS23370	COG4518	Phage tail assembly chaperone proteins, E, or 41 or 14
ROD_RS23380	COG4228	DNA circulation
ROD_RS23390	COG4384	Bacteriophage Mu Gp45 protein
ROD_RS23400	COG3299	homolog of phage Mu protein gp47
ROD_RS23425	COG1961	COG1961 Site-specific recombinases, DNA invertase Pin homologs
ROD_RS23450	COG1063	alcohol dehydrogenase
ROD_RS23455	COG3775	system Galactitol-specific IIC component
ROD_RS23460	COG3414	Phosphotransferase system galactitol-specific IIB component
ROD_RS23465	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
ROD_RS23480	COG2721	sulfolactate sulfo-lyase activity
ROD_RS23490	COG2084	Dehydrogenase
ROD_RS23495	COG1929	Belongs to the glycerate kinase type-1 family
ROD_RS23500	COG3005	denitrification pathway
ROD_RS23505	COG0243	molybdopterin cofactor binding
ROD_RS23510	COG0583	DNA-binding transcription factor activity
ROD_RS23530	COG1882	Formate acetyltransferase
ROD_RS23535	COG1760	l-serine dehydratase
ROD_RS23540	COG0814	amino acid
ROD_RS23550	COG1741	Belongs to the pirin family
ROD_RS23555	COG0583	DNA-binding transcription factor activity
ROD_RS23560	COG3152	Membrane
ROD_RS23565	COG3152	Membrane
ROD_RS23570	COG0435	Glutathione S-transferase
ROD_RS23580	COG4372	Transposase
ROD_RS23585	COG3436	PFAM IS66 Orf2 family protein
ROD_RS23625	COG2259	Doxx family
ROD_RS23635	COG5393	Putative Actinobacterial Holin-X, holin superfamily III
ROD_RS23640	COG4575	ribosome binding
ROD_RS23645	COG1422	Protein of unknown function (DUF1090)
ROD_RS23655	COG0586	Pfam SNARE associated Golgi protein
ROD_RS23660	COG2186	Transcriptional regulator
ROD_RS23665	COG2271	Major facilitator Superfamily
ROD_RS23675	COG2721	sulfolactate sulfo-lyase activity
ROD_RS23695	COG0673	inositol 2-dehydrogenase activity
ROD_RS23700	COG1451	nucleotide metabolic process
ROD_RS23710	COG1902	pentaerythritol trinitrate reductase activity
ROD_RS23710	COG0446	pyridine nucleotide-disulphide oxidoreductase
ROD_RS23720	COG0840	transmembrane signaling receptor activity
ROD_RS23725	COG0840	transmembrane signaling receptor activity
ROD_RS23730	COG1695	Transcriptional regulator
ROD_RS23735	COG2375	cellular response to nickel ion
ROD_RS23760	COG2274	protein secretion by the type I secretion system
ROD_RS23770	COG0477	Major facilitator Superfamily
ROD_RS23775	COG3204	pilus organization
ROD_RS23790	COG4225	unsaturated rhamnogalacturonyl hydrolase activity
ROD_RS23795	COG2733	membrane
ROD_RS23800	COG0583	DNA-binding transcription factor activity
ROD_RS23805	COG1301	dicarboxylic acid transport
ROD_RS23810	COG0626	cystathionine gamma-synthase activity
ROD_RS23815	COG2814	Major facilitator Superfamily
ROD_RS23830	COG5464	transposase or invertase
ROD_RS23840	COG0523	cobalamin synthesis protein
ROD_RS23845	COG2879	small protein
ROD_RS23850	COG1966	Carbon starvation protein
ROD_RS23865	COG3653	N-Acyl-D-aspartate D-glutamate deacylase
ROD_RS23875	COG4145	pantothenate transmembrane transporter activity
ROD_RS23880	COG3734	2-keto-3-deoxy-galactonokinase
ROD_RS23885	COG0800	Aldolase
ROD_RS23895	COG0840	transmembrane signaling receptor activity
ROD_RS23900	COG2271	Major facilitator Superfamily
ROD_RS23905	COG1802	Transcriptional regulator
ROD_RS23910	COG1063	alcohol dehydrogenase
ROD_RS23915	COG3933	PFAM sigma-54 factor interaction domain-containing protein
ROD_RS23915	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
ROD_RS23930	COG3715	PTS system
ROD_RS23940	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
ROD_RS23960	COG1484	DNA-dependent DNA replication
ROD_RS23975	COG2966	Psort location CytoplasmicMembrane, score
ROD_RS23990	COG2197	response regulator
ROD_RS23995	COG2197	response regulator
ROD_RS24000	COG4114	ferric iron reductase
ROD_RS24005	COG3706	GGDEF domain
ROD_RS24035	COG3050	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. The exact function of the psi subunit is
ROD_RS24040	COG0456	acetyltransferase
ROD_RS24045	COG1011	Hydrolase
ROD_RS24050	COG2801	Transposase and inactivated derivatives
ROD_RS24125	COG2823	Periplasmic or secreted lipoprotein
ROD_RS24135	COG4667	esterase of the alpha-beta hydrolase superfamily
ROD_RS24140	COG0084	hydrolase, TatD family'
ROD_RS24145	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
ROD_RS24150	COG1328	CTP reductase activity
ROD_RS24185	COG3726	membrane protein affecting hemolysin expression
ROD_RS24190	COG0560	Phosphoserine phosphatase
ROD_RS24220	COG0111	D-isomer specific 2-hydroxyacid dehydrogenase
ROD_RS24235	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
ROD_RS24250	COG0006	proline dipeptidase activity
ROD_RS24255	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ROD_RS24260	COG0654	COG0654 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases
ROD_RS24290	COG1272	protein, Hemolysin III
ROD_RS24305	COG2938	An FAD assembly protein, which accelerates covalent attachment of the cofactor into other proteins. Plays an essential role in the assembly of succinate dehydrogenase (SDH, respiratory complex II), an enzyme complex that is a component of both the tricarboxylic acid cycle and the electron transport chain, and which couples the oxidation of succinate to fumarate with the reduction of ubiquinone (coenzyme Q) to ubiquinol. Required for flavinylation (covalent attachment of FAD) of the flavoprotein subunit SdhA of SDH
ROD_RS24315	COG0716	FMN binding
ROD_RS24320	COG4974	Belongs to the 'phage' integrase family
ROD_RS24330	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
ROD_RS24350	COG4942	peptidase
ROD_RS24360	COG4974	Belongs to the 'phage' integrase family
ROD_RS24400	COG3423	Transcriptional regulator
ROD_RS24445	COG2003	Belongs to the UPF0758 family
ROD_RS24460	COG3468	outer membrane autotransporter barrel domain protein
ROD_RS24510	COG2801	Transposase and inactivated derivatives
ROD_RS24530	COG2831	hemolysin activation secretion protein
ROD_RS24535	COG2994	toxin metabolic process
ROD_RS24540	COG3210	domain, Protein
ROD_RS24570	COG3210	domain, Protein
ROD_RS24625	COG4372	Transposase
ROD_RS24630	COG3436	PFAM IS66 Orf2 family protein
ROD_RS24650	COG4372	Transposase
ROD_RS24655	COG3385	transposase activity
ROD_RS24665	COG0582	viral genome integration into host DNA
ROD_RS24675	COG1811	Na channel or pump
ROD_RS24680	COG1982	Orn Lys Arg decarboxylase major
ROD_RS24685	COG2211	Major facilitator Superfamily
ROD_RS24700	COG1194	a g-specific adenine glycosylase
ROD_RS24710	COG3171	Protein conserved in bacteria
ROD_RS24720	COG0252	asparaginase activity
ROD_RS24725	COG0635	Involved in the biosynthesis of porphyrin-containing compound
ROD_RS24740	COG0762	integral membrane protein
ROD_RS24745	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
ROD_RS24750	COG2805	Type II/IV secretion system protein
ROD_RS24765	COG0189	ligase activity
ROD_RS24770	COG1385	rRNA (uridine-N3-)-methyltransferase activity
ROD_RS24775	COG2356	endonuclease I
ROD_RS24785	COG2205	protein histidine kinase activity
ROD_RS24790	COG0745	RESPONSE REGULATOR receiver
ROD_RS24795	COG2351	hydroxyisourate hydrolase activity
ROD_RS24800	COG2814	Major facilitator Superfamily
ROD_RS24820	COG1166	arginine decarboxylase activity
ROD_RS24830	COG0501	Belongs to the peptidase M48B family
ROD_RS24835	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ROD_RS24850	COG3395	kinase activity
ROD_RS24865	COG0698	ribose 5-phosphate isomerase
ROD_RS24870	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
ROD_RS24875	COG0021	Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate
ROD_RS24885	COG3121	Chaperone
ROD_RS24900	COG4223	transferase activity, transferring acyl groups other than amino-acyl groups
ROD_RS24900	COG3210	domain, Protein
ROD_RS24900	COG3064	Membrane
ROD_RS24915	COG0191	fructose-bisphosphate aldolase activity
ROD_RS24920	COG0549	Belongs to the carbamate kinase family
ROD_RS24925	COG2271	Major facilitator Superfamily
ROD_RS24930	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ROD_RS24935	COG0074	Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit
ROD_RS24945	COG0583	DNA-binding transcription factor activity
ROD_RS24950	COG0668	transmembrane transport
ROD_RS24960	COG2968	Membrane
ROD_RS24965	COG0488	(ABC) transporter
ROD_RS24970	COG0741	lytic transglycosylase activity
ROD_RS24975	COG2973	This protein is an aporepressor. When complexed with L- tryptophan it binds the operator region of the trp operon (5'- ACTAGT-'3') and prevents the initiation of transcription. The complex also regulates trp repressor biosynthesis by binding to its regulatory region
ROD_RS24990	COG3708	Transcriptional regulator
ROD_RS24990	COG2207	Transcriptional regulator
ROD_RS24995	COG3045	CreA protein
ROD_RS25000	COG0745	RESPONSE REGULATOR receiver
ROD_RS25005	COG2205	protein histidine kinase activity
ROD_RS25010	COG4452	Inner membrane protein CreD
ROD_RS25015	COG0745	RESPONSE REGULATOR receiver
ROD_RS25555	COG2197	response regulator
ROD_RS25650	COG3209	COG3209 Rhs family protein
ROD_RS25670	COG3157	Type VI secretion system effector, Hcp
ROD_RS25685	COG2165	general secretion pathway protein
ROD_RS25695	COG0739	heme binding