locus-tag class description FD428_RS00005 PF00308 Bacterial dnaA protein FD428_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix FD428_RS00005 PF11638 DnaA N-terminal domain FD428_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain FD428_RS00010 PF02767 DNA polymerase III beta subunit, central domain FD428_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain FD428_RS00015 PF02463 RecF/RecN/SMC N terminal domain FD428_RS00020 PF01751 Toprim domain FD428_RS00020 PF18053 DNA gyrase B subunit insert domain FD428_RS00020 PF00986 DNA gyrase B subunit, carboxyl terminus FD428_RS00020 PF00204 DNA gyrase B FD428_RS00020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS00040 PF07715 TonB-dependent Receptor Plug Domain FD428_RS00040 PF00593 TonB dependent receptor FD428_RS00055 PF07676 WD40-like Beta Propeller Repeat FD428_RS00055 PF12566 Protein of unknown function (DUF3748) FD428_RS00060 PF07119 Protein of unknown function (DUF1375) FD428_RS00065 PF00011 Hsp20/alpha crystallin family FD428_RS00070 PF00011 Hsp20/alpha crystallin family FD428_RS00080 PF02080 TrkA-C domain FD428_RS00080 PF06826 Predicted Permease Membrane Region FD428_RS00085 PF00392 Bacterial regulatory proteins, gntR family FD428_RS00085 PF07702 UTRA domain FD428_RS00090 PF02378 Phosphotransferase system, EIIC FD428_RS00090 PF00367 phosphotransferase system, EIIB FD428_RS00095 PF11975 Family 4 glycosyl hydrolase C-terminal domain FD428_RS00095 PF02056 Family 4 glycosyl hydrolase FD428_RS00100 PF02311 AraC-like ligand binding domain FD428_RS00100 PF12833 Helix-turn-helix domain FD428_RS00105 PF00474 Sodium:solute symporter family FD428_RS00110 PF00884 Sulfatase FD428_RS00110 PF16347 Domain of unknown function (DUF4976) FD428_RS00115 PF02656 Domain of unknown function (DUF202) FD428_RS00120 PF02656 Domain of unknown function (DUF202) FD428_RS00125 PF04055 Radical SAM superfamily FD428_RS00125 PF13186 Iron-sulfur cluster-binding domain FD428_RS00130 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS00135 PF02447 GntP family permease FD428_RS00140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS00140 PF03466 LysR substrate binding domain FD428_RS00150 PF07690 Major Facilitator Superfamily FD428_RS00160 PF13939 Toxin TisB, type I toxin-antitoxin system FD428_RS00165 PF08049 IlvB leader peptide FD428_RS00170 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS00170 PF00205 Thiamine pyrophosphate enzyme, central domain FD428_RS00170 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS00175 PF01842 ACT domain FD428_RS00185 PF00072 Response regulator receiver domain FD428_RS00185 PF00196 Bacterial regulatory proteins, luxR family FD428_RS00190 PF07730 Histidine kinase FD428_RS00190 PF05231 MASE1 FD428_RS00190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS00195 PF07690 Major Facilitator Superfamily FD428_RS00200 PF07690 Major Facilitator Superfamily FD428_RS00205 PF01081 KDPG and KHG aldolase FD428_RS00210 PF05035 2-keto-3-deoxy-galactonokinase FD428_RS00215 PF07690 Major Facilitator Superfamily FD428_RS00220 PF08666 SAF domain FD428_RS00220 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FD428_RS00225 PF00701 Dihydrodipicolinate synthetase family FD428_RS00230 PF01614 Bacterial transcriptional regulator FD428_RS00230 PF09339 IclR helix-turn-helix domain FD428_RS00235 PF06711 Protein of unknown function (DUF1198) FD428_RS00250 PF07690 Major Facilitator Superfamily FD428_RS00260 PF00158 Sigma-54 interaction domain FD428_RS00260 PF00874 PRD domain FD428_RS00270 PF03830 PTS system sorbose subfamily IIB component FD428_RS00270 PF03610 PTS system fructose IIA component FD428_RS00275 PF03609 PTS system sorbose-specific iic component FD428_RS00280 PF03613 PTS system mannose/fructose/sorbose family IID component FD428_RS00285 PF03841 L-seryl-tRNA selenium transferase FD428_RS00290 PF07071 KDGP aldolase FD428_RS00295 PF03180 NLPA lipoprotein FD428_RS00300 PF16970 Type-1 fimbrial protein, A FD428_RS00305 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS00305 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS00310 PF00577 Outer membrane usher protein FD428_RS00310 PF13953 PapC C-terminal domain FD428_RS00310 PF13954 PapC N-terminal domain FD428_RS00320 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS00320 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS00330 PF00892 EamA-like transporter family FD428_RS00335 PF02463 RecF/RecN/SMC N terminal domain FD428_RS00340 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS00340 PF00107 Zinc-binding dehydrogenase FD428_RS00345 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS00345 PF03466 LysR substrate binding domain FD428_RS00355 PF05170 AsmA family FD428_RS00360 PF00860 Permease family FD428_RS00365 PF17191 RecG wedge domain FD428_RS00365 PF00270 DEAD/DEAH box helicase FD428_RS00365 PF00271 Helicase conserved C-terminal domain FD428_RS00370 PF00588 SpoU rRNA Methylase family FD428_RS00370 PF12105 SpoU, rRNA methylase, C-terminal FD428_RS00375 PF04607 Region found in RelA / SpoT proteins FD428_RS00375 PF13291 ACT domain FD428_RS00375 PF02824 TGS domain FD428_RS00380 PF01192 RNA polymerase Rpb6 FD428_RS00385 PF00625 Guanylate kinase FD428_RS00390 PF01653 NAD-dependent DNA ligase adenylation domain FD428_RS00390 PF03120 NAD-dependent DNA ligase OB-fold domain FD428_RS00395 PF03458 UPF0126 domain FD428_RS00400 PF08340 Domain of unknown function (DUF1732) FD428_RS00400 PF03755 YicC-like family, N-terminal region FD428_RS00405 PF03725 3' exoribonuclease family, domain 2 FD428_RS00405 PF01138 3' exoribonuclease family, domain 1 FD428_RS00410 PF00156 Phosphoribosyl transferase domain FD428_RS00415 PF00440 Bacterial regulatory proteins, tetR family FD428_RS00420 PF00692 dUTPase FD428_RS00425 PF02441 Flavoprotein FD428_RS00425 PF04127 DNA / pantothenate metabolism flavoprotein FD428_RS00430 PF04002 RadC-like JAB domain FD428_RS00435 PF00830 Ribosomal L28 family FD428_RS00440 PF00471 Ribosomal protein L33 FD428_RS00445 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FD428_RS00445 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FD428_RS00445 PF06827 Zinc finger found in FPG and IleRS FD428_RS00450 PF01467 Cytidylyltransferase-like FD428_RS00455 PF04413 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase) FD428_RS00460 PF00534 Glycosyl transferases group 1 FD428_RS00460 PF13439 Glycosyltransferase Family 4 FD428_RS00470 PF08437 Glycosyl transferase family 8 C-terminal FD428_RS00470 PF01501 Glycosyl transferase family 8 FD428_RS00475 PF08437 Glycosyl transferase family 8 C-terminal FD428_RS00475 PF01501 Glycosyl transferase family 8 FD428_RS00485 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FD428_RS00490 PF00535 Glycosyl transferase family 2 FD428_RS00495 PF04932 O-Antigen ligase FD428_RS00500 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FD428_RS00505 PF01075 Glycosyltransferase family 9 (heptosyltransferase) FD428_RS00510 PF01370 NAD dependent epimerase/dehydratase family FD428_RS00515 PF00155 Aminotransferase class I and II FD428_RS00520 PF00107 Zinc-binding dehydrogenase FD428_RS00520 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS00530 PF00535 Glycosyl transferase family 2 FD428_RS00535 PF04748 Divergent polysaccharide deacetylase FD428_RS00540 PF01551 Peptidase family M23 FD428_RS00545 PF06415 BPG-independent PGAM N-terminus (iPGM_N) FD428_RS00545 PF01676 Metalloenzyme superfamily FD428_RS00550 PF00581 Rhodanese-like domain FD428_RS00555 PF00462 Glutaredoxin FD428_RS00560 PF02556 Preprotein translocase subunit SecB FD428_RS00565 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus FD428_RS00565 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus FD428_RS00570 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS00570 PF06426 Serine acetyltransferase, N-terminal FD428_RS00575 PF00588 SpoU rRNA Methylase family FD428_RS00580 PF01070 FMN-dependent dehydrogenase FD428_RS00585 PF07729 FCD domain FD428_RS00585 PF00392 Bacterial regulatory proteins, gntR family FD428_RS00590 PF02652 L-lactate permease FD428_RS00595 PF10928 Protein of unknown function (DUF2810) FD428_RS00605 PF05068 Mannitol repressor FD428_RS00610 PF08125 Mannitol dehydrogenase C-terminal domain FD428_RS00610 PF01232 Mannitol dehydrogenase Rossmann domain FD428_RS00615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS00615 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS00615 PF02378 Phosphotransferase system, EIIC FD428_RS00620 PF11742 Protein of unknown function (DUF3302) FD428_RS00625 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS00625 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS00630 PF13417 Glutathione S-transferase, N-terminal domain FD428_RS00630 PF00043 Glutathione S-transferase, C-terminal domain FD428_RS00635 PF12390 Selenocysteine synthase N terminal FD428_RS00635 PF03841 L-seryl-tRNA selenium transferase FD428_RS00640 PF09106 Elongation factor SelB, winged helix FD428_RS00640 PF09107 Elongation factor SelB, winged helix FD428_RS00640 PF00009 Elongation factor Tu GTP binding domain FD428_RS00640 PF03144 Elongation factor Tu domain 2 FD428_RS00645 PF00465 Iron-containing alcohol dehydrogenase FD428_RS00650 PF00171 Aldehyde dehydrogenase family FD428_RS00660 PF00596 Class II Aldolase and Adducin N-terminal domain FD428_RS00665 PF01261 Xylose isomerase-like TIM barrel FD428_RS00670 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FD428_RS00675 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS00675 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS00680 PF07690 Major Facilitator Superfamily FD428_RS00685 PF16154 Domain of unknown function (DUF4862) FD428_RS00690 PF04074 YhcH/YjgK/YiaL FD428_RS00695 PF02615 Malate/L-lactate dehydrogenase FD428_RS00700 PF01614 Bacterial transcriptional regulator FD428_RS00700 PF09339 IclR helix-turn-helix domain FD428_RS00705 PF13247 4Fe-4S dicluster domain FD428_RS00710 PF00155 Aminotransferase class I and II FD428_RS00715 PF00128 Alpha amylase, catalytic domain FD428_RS00720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FD428_RS00725 PF12833 Helix-turn-helix domain FD428_RS00730 PF02653 Branched-chain amino acid transport system / permease component FD428_RS00735 PF00005 ABC transporter FD428_RS00740 PF13407 Periplasmic binding protein domain FD428_RS00750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS00750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS00760 PF01757 Acyltransferase family FD428_RS00765 PF13983 YsaB-like lipoprotein FD428_RS00770 PF02091 Glycyl-tRNA synthetase alpha subunit FD428_RS00775 PF02092 Glycyl-tRNA synthetase beta subunit FD428_RS00775 PF05746 DALR anticodon binding domain FD428_RS00780 PF00313 'Cold-shock' DNA-binding domain FD428_RS00785 PF01381 Helix-turn-helix FD428_RS00790 PF11254 Protein of unknown function (DUF3053) FD428_RS00795 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD428_RS00795 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FD428_RS00800 PF07690 Major Facilitator Superfamily FD428_RS00805 PF00294 pfkB family carbohydrate kinase FD428_RS00815 PF00356 Bacterial regulatory proteins, lacI family FD428_RS00820 PF13488 Glycine zipper FD428_RS00820 PF00691 OmpA family FD428_RS00825 PF18364 Molybdopterin oxidoreductase N-terminal domain FD428_RS00825 PF00384 Molybdopterin oxidoreductase FD428_RS00825 PF01568 Molydopterin dinucleotide binding domain FD428_RS00830 PF00583 Acetyltransferase (GNAT) family FD428_RS00835 PF03352 Methyladenine glycosylase FD428_RS00840 PF03797 Autotransporter beta-domain FD428_RS00845 PF07690 Major Facilitator Superfamily FD428_RS00850 PF00884 Sulfatase FD428_RS00850 PF08019 Phosphoethanolamine transferase EptA/EptB FD428_RS00870 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS00875 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS00880 PF12911 N-terminal TM domain of oligopeptide transport permease C FD428_RS00880 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS00885 PF00005 ABC transporter FD428_RS00885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS00890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS00890 PF00005 ABC transporter FD428_RS00895 PF00072 Response regulator receiver domain FD428_RS00895 PF00158 Sigma-54 interaction domain FD428_RS00895 PF02954 Bacterial regulatory protein, Fis family FD428_RS00900 PF03222 Tryptophan/tyrosine permease family FD428_RS00905 PF01053 Cys/Met metabolism PLP-dependent enzyme FD428_RS00910 PF11658 Cellulose biosynthesis protein BcsG FD428_RS00915 PF11120 Cellulose biosynthesis protein BcsF FD428_RS00920 PF10995 Cellulose biosynthesis GIL FD428_RS00925 PF10945 Cellulose biosynthesis protein BcsR FD428_RS00930 PF06564 Cellulose biosynthesis protein BcsQ FD428_RS00935 PF00535 Glycosyl transferase family 2 FD428_RS00935 PF07238 PilZ domain FD428_RS00940 PF03170 Bacterial cellulose synthase subunit FD428_RS00945 PF01270 Glycosyl hydrolases family 8 FD428_RS00950 PF05420 Cellulose synthase operon protein C C-terminus (BCSC_C) FD428_RS00955 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS00955 PF00672 HAMP domain FD428_RS00955 PF17154 Gammaproteobacterial periplasmic sensor domain FD428_RS00955 PF00563 EAL domain FD428_RS00960 PF00375 Sodium:dicarboxylate symporter family FD428_RS00965 PF00675 Insulinase (Peptidase family M16) FD428_RS00965 PF05193 Peptidase M16 inactive domain FD428_RS00970 PF00294 pfkB family carbohydrate kinase FD428_RS00975 PF00563 EAL domain FD428_RS00980 PF05170 AsmA family FD428_RS00985 PF00083 Sugar (and other) transporter FD428_RS00985 PF07690 Major Facilitator Superfamily FD428_RS00990 PF03631 Virulence factor BrkB FD428_RS00995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS00995 PF03466 LysR substrate binding domain FD428_RS01010 PF01204 Trehalase FD428_RS01015 PF14376 Haem-binding domain FD428_RS01015 PF00034 Cytochrome c FD428_RS01015 PF03150 Di-haem cytochrome c peroxidase FD428_RS01020 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS01020 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FD428_RS01025 PF04378 Ribosomal RNA large subunit methyltransferase D, RlmJ FD428_RS01030 PF01432 Peptidase family M3 FD428_RS01035 PF04445 Putative SAM-dependent methyltransferase FD428_RS01040 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS01045 PF02082 Transcriptional regulator FD428_RS01055 PF06296 RelE toxin of RelE / RelB toxin-antitoxin system FD428_RS01060 PF00854 POT family FD428_RS01065 PF00582 Universal stress protein family FD428_RS01070 PF10625 Universal stress protein B (UspB) FD428_RS01085 PF01384 Phosphate transporter family FD428_RS01095 PF01769 Divalent cation transporter FD428_RS01095 PF03448 MgtE intracellular N domain FD428_RS01095 PF00571 CBS domain FD428_RS01100 PF13533 Biotin-lipoyl like FD428_RS01105 PF00005 ABC transporter FD428_RS01115 PF01402 Ribbon-helix-helix protein, copG family FD428_RS01115 PF08753 NikR C terminal nickel binding domain FD428_RS01120 PF00005 ABC transporter FD428_RS01125 PF00005 ABC transporter FD428_RS01130 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS01135 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS01140 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS01150 PF01648 4'-phosphopantetheinyl transferase superfamily FD428_RS01155 PF02801 Beta-ketoacyl synthase, C-terminal domain FD428_RS01155 PF00109 Beta-ketoacyl synthase, N-terminal domain FD428_RS01170 PF00109 Beta-ketoacyl synthase, N-terminal domain FD428_RS01170 PF02801 Beta-ketoacyl synthase, C-terminal domain FD428_RS01195 PF00535 Glycosyl transferase family 2 FD428_RS01205 PF13193 AMP-binding enzyme C-terminal domain FD428_RS01205 PF00501 AMP-binding enzyme FD428_RS01215 PF00550 Phosphopantetheine attachment site FD428_RS01220 PF00550 Phosphopantetheine attachment site FD428_RS01225 PF01553 Acyltransferase FD428_RS01245 PF01594 AI-2E family transporter FD428_RS01250 PF07690 Major Facilitator Superfamily FD428_RS01255 PF08786 DcrB FD428_RS01260 PF02592 Putative vitamin uptake transporter FD428_RS01265 PF01206 Sulfurtransferase TusA FD428_RS01270 PF03480 Bacterial extracellular solute-binding protein, family 7 FD428_RS01275 PF00403 Heavy-metal-associated domain FD428_RS01280 PF07947 YhhN family FD428_RS01285 PF10694 Protein of unknown function (DUF2500) FD428_RS01290 PF06611 Protein of unknown function (DUF1145) FD428_RS01300 PF00448 SRP54-type protein, GTPase domain FD428_RS01300 PF02881 SRP54-type protein, helical bundle domain FD428_RS01305 PF00005 ABC transporter FD428_RS01310 PF02687 FtsX-like permease family FD428_RS01310 PF18075 FtsX extracellular domain FD428_RS01315 PF04542 Sigma-70 region 2 FD428_RS01315 PF04545 Sigma-70, region 4 FD428_RS01320 PF00202 Aminotransferase class-III FD428_RS01325 PF13458 Periplasmic binding protein FD428_RS01330 PF12568 Acetyltransferase (GNAT) domain, PanZ FD428_RS01335 PF13458 Periplasmic binding protein FD428_RS01340 PF02653 Branched-chain amino acid transport system / permease component FD428_RS01345 PF11862 Domain of unknown function (DUF3382) FD428_RS01345 PF02653 Branched-chain amino acid transport system / permease component FD428_RS01350 PF00005 ABC transporter FD428_RS01350 PF12399 Branched-chain amino acid ATP-binding cassette transporter FD428_RS01355 PF00005 ABC transporter FD428_RS01360 PF13416 Bacterial extracellular solute-binding protein FD428_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS01370 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS01375 PF00005 ABC transporter FD428_RS01375 PF17912 MalK OB fold domain FD428_RS01380 PF03009 Glycerophosphoryl diester phosphodiesterase family FD428_RS01385 PF10956 Protein of unknown function (DUF2756) FD428_RS01415 PF15567 Immunity protein 35 FD428_RS01430 PF00583 Acetyltransferase (GNAT) family FD428_RS01435 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD428_RS01435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS01440 PF02678 Pirin FD428_RS01440 PF17954 Quercetinase C-terminal cupin domain FD428_RS01445 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FD428_RS01445 PF00356 Bacterial regulatory proteins, lacI family FD428_RS01450 PF01202 Shikimate kinase FD428_RS01455 PF02447 GntP family permease FD428_RS01460 PF01914 MarC family integral membrane protein FD428_RS01465 PF02774 Semialdehyde dehydrogenase, dimerisation domain FD428_RS01465 PF01118 Semialdehyde dehydrogenase, NAD binding domain FD428_RS01470 PF00128 Alpha amylase, catalytic domain FD428_RS01470 PF02806 Alpha amylase, C-terminal all-beta domain FD428_RS01470 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD428_RS01475 PF00128 Alpha amylase, catalytic domain FD428_RS01475 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) FD428_RS01475 PF18390 Glycogen debranching enzyme C-terminal domain FD428_RS01480 PF00483 Nucleotidyl transferase FD428_RS01485 PF08323 Starch synthase catalytic domain FD428_RS01485 PF00534 Glycosyl transferases group 1 FD428_RS01490 PF00343 Carbohydrate phosphorylase FD428_RS01495 PF16901 C-terminal domain of alpha-glycerophosphate oxidase FD428_RS01495 PF01266 FAD dependent oxidoreductase FD428_RS01500 PF00581 Rhodanese-like domain FD428_RS01505 PF12122 Cytoplasmic N-terminal domain of rhomboid serine protease FD428_RS01505 PF01694 Rhomboid family FD428_RS01510 PF08220 DeoR-like helix-turn-helix domain FD428_RS01510 PF00455 DeoR C terminal sensor domain FD428_RS01515 PF00196 Bacterial regulatory proteins, luxR family FD428_RS01515 PF17874 MalT-like TPR region FD428_RS01520 PF00343 Carbohydrate phosphorylase FD428_RS01525 PF02446 4-alpha-glucanotransferase FD428_RS01530 PF02447 GntP family permease FD428_RS01535 PF01106 NifU-like domain FD428_RS01535 PF01521 Iron-sulphur cluster biosynthesis FD428_RS01540 PF00156 Phosphoribosyl transferase domain FD428_RS01545 PF00561 alpha/beta hydrolase fold FD428_RS01550 PF09012 FeoC like transcriptional regulator FD428_RS01555 PF07664 Ferrous iron transport protein B C terminus FD428_RS01555 PF17910 FeoB cytosolic helical domain FD428_RS01555 PF02421 Ferrous iron transport protein B FD428_RS01555 PF07670 Nucleoside recognition FD428_RS01560 PF04023 FeoA domain FD428_RS01565 PF09371 Tex-like protein N-terminal domain FD428_RS01565 PF16921 Tex protein YqgF-like domain FD428_RS01565 PF00575 S1 RNA binding domain FD428_RS01565 PF17674 HHH domain FD428_RS01570 PF01272 Transcription elongation factor, GreA/GreB, C-term FD428_RS01570 PF03449 Transcription elongation factor, N-terminal FD428_RS01575 PF00072 Response regulator receiver domain FD428_RS01575 PF00486 Transcriptional regulatory protein, C terminal FD428_RS01580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS01580 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS01580 PF00672 HAMP domain FD428_RS01590 PF01293 Phosphoenolpyruvate carboxykinase FD428_RS01595 PF01430 Hsp33 protein FD428_RS01600 PF01479 S4 domain FD428_RS01605 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS01610 PF07095 Intracellular growth attenuator protein IgaA FD428_RS01615 PF00293 NUDIX domain FD428_RS01620 PF00912 Transglycosylase FD428_RS01620 PF00905 Penicillin binding protein transpeptidase domain FD428_RS01620 PF17092 Penicillin-binding protein OB-like domain FD428_RS01630 PF05137 Fimbrial assembly protein (PilN) FD428_RS01640 PF10748 DNA utilization proteins HofP FD428_RS01645 PF00263 Bacterial type II and III secretion system protein FD428_RS01645 PF03958 Bacterial type II/III secretion system short domain FD428_RS01650 PF01202 Shikimate kinase FD428_RS01655 PF01761 3-dehydroquinate synthase FD428_RS01660 PF05036 Sporulation related domain FD428_RS01665 PF02086 D12 class N6 adenine-specific DNA methyltransferase FD428_RS01670 PF00834 Ribulose-phosphate 3 epimerase family FD428_RS01675 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS01680 PF00579 tRNA synthetases class I (W and Y) FD428_RS01685 PF14502 Helix-turn-helix domain FD428_RS01685 PF14503 YhfZ C-terminal domain FD428_RS01695 PF01168 Alanine racemase, N-terminal domain FD428_RS01700 PF01676 Metalloenzyme superfamily FD428_RS01705 PF02126 Phosphotriesterase family FD428_RS01710 PF10941 Protein of unknown function DUF2620 FD428_RS01715 PF10797 Protein of unknown function FD428_RS01720 PF00155 Aminotransferase class I and II FD428_RS01725 PF13978 Protein of unknown function (DUF4223) FD428_RS01735 PF14824 Sirohaem biosynthesis protein central FD428_RS01735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD428_RS01735 PF10414 Sirohaem synthase dimerisation region FD428_RS01740 PF01226 Formate/nitrite transporter FD428_RS01745 PF13806 Rieske-like [2Fe-2S] domain FD428_RS01750 PF04324 BFD-like [2Fe-2S] binding domain FD428_RS01750 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FD428_RS01750 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS01750 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FD428_RS01750 PF18267 Rubredoxin NAD+ reductase C-terminal domain FD428_RS01755 PF07690 Major Facilitator Superfamily FD428_RS01760 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FD428_RS01765 PF10832 Protein of unknown function (DUF2559) FD428_RS01770 PF02661 Fic/DOC family FD428_RS01775 PF00117 Glutamine amidotransferase class-I FD428_RS01780 PF00202 Aminotransferase class-III FD428_RS01785 PF12805 FUSC-like inner membrane protein yccS FD428_RS01790 PF00027 Cyclic nucleotide-binding domain FD428_RS01790 PF13545 Crp-like helix-turn-helix domain FD428_RS01795 PF02566 OsmC-like protein FD428_RS01800 PF00485 Phosphoribulokinase / Uridine kinase family FD428_RS01805 PF06794 Uncharacterised protein family (UPF0270) FD428_RS01810 PF00561 alpha/beta hydrolase fold FD428_RS01815 PF16957 Malonate decarboxylase, alpha subunit, transporter FD428_RS01820 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FD428_RS01825 PF06857 Malonate decarboxylase delta subunit (MdcD) FD428_RS01830 PF01039 Carboxyl transferase domain FD428_RS01840 PF03547 Membrane transport protein FD428_RS01845 PF10620 Phosphoribosyl-dephospho-CoA transferase MdcG FD428_RS01850 PF00698 Acyl transferase domain FD428_RS01855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS01855 PF03466 LysR substrate binding domain FD428_RS01865 PF02525 Flavodoxin-like fold FD428_RS01870 PF00999 Sodium/hydrogen exchanger family FD428_RS01870 PF02254 TrkA-N domain FD428_RS01875 PF09526 Probable metal-binding protein (DUF2387) FD428_RS01880 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD428_RS01885 PF04102 SlyX FD428_RS01890 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD428_RS01890 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FD428_RS01895 PF13309 HTH domain FD428_RS01895 PF08348 YheO-like PAS domain FD428_RS01900 PF02635 DsrE/DsrF-like family FD428_RS01905 PF02635 DsrE/DsrF-like family FD428_RS01910 PF04077 DsrH like protein FD428_RS01915 PF00164 Ribosomal protein S12/S23 FD428_RS01920 PF00177 Ribosomal protein S7p/S5e FD428_RS01925 PF03144 Elongation factor Tu domain 2 FD428_RS01925 PF00009 Elongation factor Tu GTP binding domain FD428_RS01925 PF03764 Elongation factor G, domain IV FD428_RS01925 PF00679 Elongation factor G C-terminus FD428_RS01925 PF14492 Elongation Factor G, domain II FD428_RS01930 PF00009 Elongation factor Tu GTP binding domain FD428_RS01930 PF03143 Elongation factor Tu C-terminal domain FD428_RS01930 PF03144 Elongation factor Tu domain 2 FD428_RS01935 PF04324 BFD-like [2Fe-2S] binding domain FD428_RS01940 PF00210 Ferritin-like domain FD428_RS01945 PF01478 Type IV leader peptidase family FD428_RS01950 PF00338 Ribosomal protein S10p/S20e FD428_RS01955 PF00297 Ribosomal protein L3 FD428_RS01960 PF00573 Ribosomal protein L4/L1 family FD428_RS01965 PF00276 Ribosomal protein L23 FD428_RS01970 PF00181 Ribosomal Proteins L2, RNA binding domain FD428_RS01970 PF03947 Ribosomal Proteins L2, C-terminal domain FD428_RS01975 PF00203 Ribosomal protein S19 FD428_RS01980 PF00237 Ribosomal protein L22p/L17e FD428_RS01985 PF00189 Ribosomal protein S3, C-terminal domain FD428_RS01985 PF07650 KH domain FD428_RS01990 PF00252 Ribosomal protein L16p/L10e FD428_RS01995 PF00831 Ribosomal L29 protein FD428_RS02000 PF00366 Ribosomal protein S17 FD428_RS02005 PF00238 Ribosomal protein L14p/L23e FD428_RS02010 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 FD428_RS02010 PF00467 KOW motif FD428_RS02015 PF00673 ribosomal L5P family C-terminus FD428_RS02015 PF00281 Ribosomal protein L5 FD428_RS02020 PF00253 Ribosomal protein S14p/S29e FD428_RS02025 PF00410 Ribosomal protein S8 FD428_RS02030 PF00347 Ribosomal protein L6 FD428_RS02035 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast FD428_RS02040 PF03719 Ribosomal protein S5, C-terminal domain FD428_RS02040 PF00333 Ribosomal protein S5, N-terminal domain FD428_RS02045 PF00327 Ribosomal protein L30p/L7e FD428_RS02050 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A FD428_RS02055 PF00344 SecY translocase FD428_RS02060 PF00444 Ribosomal protein L36 FD428_RS02065 PF00416 Ribosomal protein S13/S18 FD428_RS02070 PF00411 Ribosomal protein S11 FD428_RS02075 PF01479 S4 domain FD428_RS02075 PF00163 Ribosomal protein S4/S9 N-terminal domain FD428_RS02080 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain FD428_RS02080 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain FD428_RS02080 PF01000 RNA polymerase Rpb3/RpoA insert domain FD428_RS02085 PF01196 Ribosomal protein L17 FD428_RS02090 PF09350 Domain of unknown function (DUF1992) FD428_RS02095 PF13411 MerR HTH family regulatory protein FD428_RS02100 PF03889 Alternative ribosome-rescue factor A FD428_RS02105 PF01741 Large-conductance mechanosensitive channel, MscL FD428_RS02110 PF02254 TrkA-N domain FD428_RS02110 PF02080 TrkA-C domain FD428_RS02115 PF01029 NusB family FD428_RS02115 PF01189 16S rRNA methyltransferase RsmB/F FD428_RS02120 PF00551 Formyl transferase FD428_RS02120 PF02911 Formyl transferase, C-terminal domain FD428_RS02125 PF01327 Polypeptide deformylase FD428_RS02130 PF17782 DprA winged helix domain FD428_RS02130 PF02481 DNA recombination-mediator protein A FD428_RS02135 PF04361 Protein of unknown function (DUF494) FD428_RS02140 PF01396 Topoisomerase DNA binding C4 zinc finger FD428_RS02145 PF01300 Telomere recombination FD428_RS02150 PF01488 Shikimate / quinate 5-dehydrogenase FD428_RS02150 PF18317 Shikimate 5'-dehydrogenase C-terminal domain FD428_RS02150 PF08501 Shikimate dehydrogenase substrate binding domain FD428_RS02155 PF07369 Protein of unknown function (DUF1488) FD428_RS02160 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS02205 PF00005 ABC transporter FD428_RS02210 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS02215 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS02220 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS02230 PF00873 AcrB/AcrD/AcrF family FD428_RS02235 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS02235 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS02240 PF08361 MAATS-type transcriptional repressor, C-terminal region FD428_RS02240 PF00440 Bacterial regulatory proteins, tetR family FD428_RS02245 PF10831 Protein of unknown function (DUF2556) FD428_RS02250 PF01555 DNA methylase FD428_RS02255 PF02954 Bacterial regulatory protein, Fis family FD428_RS02260 PF01207 Dihydrouridine synthase (Dus) FD428_RS02265 PF00194 Eukaryotic-type carbonic anhydrase FD428_RS02275 PF00474 Sodium:solute symporter family FD428_RS02280 PF06196 Protein of unknown function (DUF997) FD428_RS02285 PF02785 Biotin carboxylase C-terminal domain FD428_RS02285 PF00289 Biotin carboxylase, N-terminal domain FD428_RS02285 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FD428_RS02290 PF00364 Biotin-requiring enzyme FD428_RS02295 PF01220 Dehydroquinase class II FD428_RS02300 PF01794 Ferric reductase like transmembrane component FD428_RS02305 PF00174 Oxidoreductase molybdopterin binding domain FD428_RS02310 PF00107 Zinc-binding dehydrogenase FD428_RS02310 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS02315 PF17157 Gammaproteobacterial periplasmic sensor domain FD428_RS02315 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS02315 PF00563 EAL domain FD428_RS02325 PF04085 rod shape-determining protein MreC FD428_RS02330 PF04093 rod shape-determining protein MreD FD428_RS02335 PF02545 Maf-like protein FD428_RS02340 PF10150 Ribonuclease E/G family FD428_RS02340 PF00575 S1 RNA binding domain FD428_RS02345 PF13116 Protein of unknown function FD428_RS02345 PF13502 AsmA-like C-terminal region FD428_RS02350 PF01523 Putative modulator of DNA gyrase FD428_RS02355 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS02355 PF03466 LysR substrate binding domain FD428_RS02360 PF07869 Protein of unknown function (DUF1656) FD428_RS02365 PF13533 Biotin-lipoyl like FD428_RS02370 PF04632 Fusaric acid resistance protein family FD428_RS02375 PF00171 Aldehyde dehydrogenase family FD428_RS02380 PF01337 Barstar (barnase inhibitor) FD428_RS02385 PF07338 Protein of unknown function (DUF1471) FD428_RS02390 PF02863 Arginine repressor, C-terminal domain FD428_RS02390 PF01316 Arginine repressor, DNA binding domain FD428_RS02395 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FD428_RS02395 PF00056 lactate/malate dehydrogenase, NAD binding domain FD428_RS02400 PF13180 PDZ domain FD428_RS02405 PF00595 PDZ domain FD428_RS02405 PF13180 PDZ domain FD428_RS02410 PF06295 Protein of unknown function (DUF1043) FD428_RS02415 PF03969 AFG1-like ATPase FD428_RS02420 PF00572 Ribosomal protein L13 FD428_RS02425 PF00380 Ribosomal protein S9/S16 FD428_RS02430 PF00043 Glutathione S-transferase, C-terminal domain FD428_RS02430 PF02798 Glutathione S-transferase, N-terminal domain FD428_RS02435 PF04386 Stringent starvation protein B FD428_RS02440 PF00392 Bacterial regulatory proteins, gntR family FD428_RS02440 PF07729 FCD domain FD428_RS02445 PF00701 Dihydrodipicolinate synthetase family FD428_RS02450 PF07690 Major Facilitator Superfamily FD428_RS02455 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase FD428_RS02460 PF00480 ROK family FD428_RS02465 PF04074 YhcH/YjgK/YiaL FD428_RS02470 PF17761 DUF1016 N-terminal domain FD428_RS02470 PF06250 YhcG PDDEXK nuclease domain FD428_RS02475 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FD428_RS02475 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS02480 PF01493 GXGXG motif FD428_RS02480 PF00310 Glutamine amidotransferases class-II FD428_RS02480 PF01645 Conserved region in glutamate synthase FD428_RS02480 PF04898 Glutamate synthase central domain FD428_RS02485 PF16199 Radical_SAM C-terminal domain FD428_RS02485 PF04055 Radical SAM superfamily FD428_RS02490 PF01627 Hpt domain FD428_RS02490 PF00072 Response regulator receiver domain FD428_RS02490 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS02490 PF18415 Histidine kinase receptor ArcB trans-membrane domain FD428_RS02490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS02490 PF00989 PAS fold FD428_RS02500 PF00912 Transglycosylase FD428_RS02505 PF10707 PhoP regulatory network protein YrbL FD428_RS02510 PF00381 PTS HPr component phosphorylation site FD428_RS02515 PF03668 P-loop ATPase protein family FD428_RS02520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS02525 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FD428_RS02530 PF00309 Sigma-54 factor, Activator interacting domain (AID) FD428_RS02530 PF04552 Sigma-54, DNA binding domain FD428_RS02530 PF04963 Sigma-54 factor, core binding domain FD428_RS02535 PF12399 Branched-chain amino acid ATP-binding cassette transporter FD428_RS02535 PF00005 ABC transporter FD428_RS02540 PF03968 OstA-like protein FD428_RS02545 PF06835 Lipopolysaccharide-assembly, LptC-related FD428_RS02555 PF01380 SIS domain FD428_RS02555 PF00571 CBS domain FD428_RS02560 PF01699 Sodium/calcium exchanger protein FD428_RS02565 PF00005 ABC transporter FD428_RS02570 PF02405 Permease MlaE FD428_RS02575 PF02470 MlaD protein FD428_RS02580 PF05494 MlaC protein FD428_RS02585 PF13466 STAS domain FD428_RS02590 PF01722 BolA-like protein FD428_RS02595 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FD428_RS02600 PF13693 Winged helix-turn-helix DNA-binding FD428_RS02605 PF00348 Polyprenyl synthetase FD428_RS02610 PF00829 Ribosomal prokaryotic L21 protein FD428_RS02615 PF01016 Ribosomal L27 protein FD428_RS02620 PF00892 EamA-like transporter family FD428_RS02625 PF01926 50S ribosome-binding GTPase FD428_RS02625 PF01018 GTP1/OBG FD428_RS02630 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family FD428_RS02635 PF03449 Transcription elongation factor, N-terminal FD428_RS02635 PF01272 Transcription elongation factor, GreA/GreB, C-term FD428_RS02640 PF01985 CRS1 / YhbY (CRM) domain FD428_RS02645 PF01728 FtsJ-like methyltransferase FD428_RS02650 PF00004 ATPase family associated with various cellular activities (AAA) FD428_RS02650 PF17862 AAA+ lid domain FD428_RS02650 PF01434 Peptidase family M41 FD428_RS02650 PF06480 FtsH Extracellular FD428_RS02655 PF00809 Pterin binding enzyme FD428_RS02660 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FD428_RS02660 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FD428_RS02660 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FD428_RS02660 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FD428_RS02665 PF03840 Preprotein translocase SecG subunit FD428_RS02675 PF00764 Arginosuccinate synthase FD428_RS02685 PF02576 RimP N-terminal domain FD428_RS02685 PF17384 RimP C-terminal SH3 domain FD428_RS02690 PF00575 S1 RNA binding domain FD428_RS02690 PF13184 NusA-like KH domain FD428_RS02690 PF08529 NusA N-terminal domain FD428_RS02695 PF00009 Elongation factor Tu GTP binding domain FD428_RS02695 PF03144 Elongation factor Tu domain 2 FD428_RS02695 PF11987 Translation-initiation factor 2 FD428_RS02695 PF08364 Bacterial translation initiation factor IF-2 associated region FD428_RS02695 PF04760 Translation initiation factor IF-2, N-terminal region FD428_RS02700 PF02033 Ribosome-binding factor A FD428_RS02705 PF16198 tRNA pseudouridylate synthase B C-terminal domain FD428_RS02705 PF01509 TruB family pseudouridylate synthase (N terminal domain) FD428_RS02705 PF09157 Pseudouridine synthase II TruB, C-terminal FD428_RS02710 PF00312 Ribosomal protein S15 FD428_RS02715 PF01138 3' exoribonuclease family, domain 1 FD428_RS02715 PF00013 KH domain FD428_RS02715 PF03725 3' exoribonuclease family, domain 2 FD428_RS02715 PF00575 S1 RNA binding domain FD428_RS02715 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain FD428_RS02720 PF07719 Tetratricopeptide repeat FD428_RS02720 PF13181 Tetratricopeptide repeat FD428_RS02730 PF00270 DEAD/DEAH box helicase FD428_RS02730 PF03880 DbpA RNA binding domain FD428_RS02730 PF12343 Cold shock protein DEAD box A FD428_RS02730 PF00271 Helicase conserved C-terminal domain FD428_RS02735 PF03222 Tryptophan/tyrosine permease family FD428_RS02740 PF00296 Luciferase-like monooxygenase FD428_RS02745 PF01136 Peptidase family U32 FD428_RS02750 PF01136 Peptidase family U32 FD428_RS02755 PF02036 SCP-2 sterol transfer family FD428_RS02760 PF13508 Acetyltransferase (GNAT) domain FD428_RS02765 PF01541 GIY-YIG catalytic domain FD428_RS02775 PF13460 NAD(P)H-binding FD428_RS02780 PF03773 Predicted permease FD428_RS02785 PF04972 BON domain FD428_RS02790 PF13580 SIS domain FD428_RS02795 PF02021 Uncharacterised protein family UPF0102 FD428_RS02800 PF04348 LppC putative lipoprotein FD428_RS02805 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD428_RS02810 PF00155 Aminotransferase class I and II FD428_RS02815 PF00367 phosphotransferase system, EIIB FD428_RS02815 PF02378 Phosphotransferase system, EIIC FD428_RS02820 PF01116 Fructose-bisphosphate aldolase class-II FD428_RS02825 PF01380 SIS domain FD428_RS02830 PF01979 Amidohydrolase family FD428_RS02835 PF03610 PTS system fructose IIA component FD428_RS02840 PF03613 PTS system mannose/fructose/sorbose family IID component FD428_RS02845 PF03609 PTS system sorbose-specific iic component FD428_RS02850 PF03830 PTS system sorbose subfamily IIB component FD428_RS02855 PF08013 Tagatose 6 phosphate kinase FD428_RS02860 PF00455 DeoR C terminal sensor domain FD428_RS02860 PF08220 DeoR-like helix-turn-helix domain FD428_RS02865 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FD428_RS02865 PF08666 SAF domain FD428_RS02870 PF03328 HpcH/HpaI aldolase/citrate lyase family FD428_RS02875 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FD428_RS02875 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FD428_RS02880 PF02595 Glycerate kinase family FD428_RS02890 PF03466 LysR substrate binding domain FD428_RS02890 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS02895 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS02900 PF03222 Tryptophan/tyrosine permease family FD428_RS02905 PF00871 Acetokinase family FD428_RS02910 PF01228 Glycine radical FD428_RS02910 PF02901 Pyruvate formate lyase-like FD428_RS02915 PF01042 Endoribonuclease L-PSP FD428_RS02920 PF03315 Serine dehydratase beta chain FD428_RS02920 PF03313 Serine dehydratase alpha chain FD428_RS02930 PF03313 Serine dehydratase alpha chain FD428_RS02935 PF17954 Quercetinase C-terminal cupin domain FD428_RS02935 PF02678 Pirin FD428_RS02940 PF03466 LysR substrate binding domain FD428_RS02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS02945 PF05656 Protein of unknown function (DUF805) FD428_RS02950 PF13409 Glutathione S-transferase, N-terminal domain FD428_RS02960 PF13997 YqjK-like protein FD428_RS02965 PF07332 Putative Actinobacterial Holin-X, holin superfamily III FD428_RS02970 PF05957 Bacterial protein of unknown function (DUF883) FD428_RS02975 PF06476 Protein of unknown function (DUF1090) FD428_RS02980 PF13721 SecD export protein N-terminal TM region FD428_RS02985 PF09335 SNARE associated Golgi protein FD428_RS02990 PF07729 FCD domain FD428_RS02990 PF00392 Bacterial regulatory proteins, gntR family FD428_RS02995 PF07690 Major Facilitator Superfamily FD428_RS03000 PF02614 Glucuronate isomerase FD428_RS03005 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus FD428_RS03005 PF08666 SAF domain FD428_RS03010 PF00375 Sodium:dicarboxylate symporter family FD428_RS03015 PF03741 Integral membrane protein TerC family FD428_RS03020 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS03025 PF01863 Protein of unknown function DUF45 FD428_RS03030 PF05175 Methyltransferase small domain FD428_RS03035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FD428_RS03035 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS03040 PF01204 Trehalase FD428_RS03050 PF13520 Amino acid permease FD428_RS03055 PF04074 YhcH/YjgK/YiaL FD428_RS03060 PF16353 Domain of unknown function(DUF4981) FD428_RS03060 PF02837 Glycosyl hydrolases family 2, sugar binding domain FD428_RS03060 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FD428_RS03060 PF02929 Beta galactosidase small chain FD428_RS03060 PF00703 Glycosyl hydrolases family 2 FD428_RS03065 PF00356 Bacterial regulatory proteins, lacI family FD428_RS03070 PF01588 Putative tRNA binding domain FD428_RS03075 PF00202 Aminotransferase class-III FD428_RS03080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS03080 PF08447 PAS fold FD428_RS03085 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS03085 PF00672 HAMP domain FD428_RS03085 PF02203 Tar ligand binding domain homologue FD428_RS03090 PF03551 Transcriptional regulator PadR-like family FD428_RS03095 PF04954 Siderophore-interacting protein FD428_RS03095 PF08021 Siderophore-interacting FAD-binding domain FD428_RS03100 PF02733 Dak1 domain FD428_RS03100 PF02734 DAK2 domain FD428_RS03105 PF00465 Iron-containing alcohol dehydrogenase FD428_RS03110 PF02954 Bacterial regulatory protein, Fis family FD428_RS03110 PF00989 PAS fold FD428_RS03110 PF00158 Sigma-54 interaction domain FD428_RS03120 PF08986 Domain of unknown function (DUF1889) FD428_RS03130 PF03167 Uracil DNA glycosylase superfamily FD428_RS03135 PF04545 Sigma-70, region 4 FD428_RS03135 PF03979 Sigma-70 factor, region 1.1 FD428_RS03135 PF04539 Sigma-70 region 3 FD428_RS03135 PF04542 Sigma-70 region 2 FD428_RS03135 PF00140 Sigma-70 factor, region 1.2 FD428_RS03135 PF04546 Sigma-70, non-essential region FD428_RS03140 PF08278 DNA primase DnaG DnaB-binding FD428_RS03140 PF01807 CHC2 zinc finger FD428_RS03140 PF10410 DnaB-helicase binding domain of primase FD428_RS03140 PF08275 DNA primase catalytic core, N-terminal domain FD428_RS03145 PF01165 Ribosomal protein S21 FD428_RS03150 PF00814 Glycoprotease family FD428_RS03155 PF02492 CobW/HypB/UreG, nucleotide-binding domain FD428_RS03160 PF01730 UreF FD428_RS03165 PF02814 UreE urease accessory protein, N-terminal domain FD428_RS03165 PF05194 UreE urease accessory protein, C-terminal domain FD428_RS03170 PF01979 Amidohydrolase family FD428_RS03170 PF00449 Urease alpha-subunit, N-terminal domain FD428_RS03175 PF00699 Urease beta subunit FD428_RS03180 PF00547 Urease, gamma subunit FD428_RS03185 PF01774 UreD urease accessory protein FD428_RS03190 PF00939 Sodium:sulfate symporter transmembrane region FD428_RS03195 PF05683 Fumarase C-terminus FD428_RS03200 PF05681 Fumarate hydratase (Fumerase) FD428_RS03205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS03205 PF03466 LysR substrate binding domain FD428_RS03210 PF02660 Glycerol-3-phosphate acyltransferase FD428_RS03215 PF02152 Dihydroneopterin aldolase FD428_RS03220 PF02673 Bacitracin resistance protein BacA FD428_RS03230 PF12627 Probable RNA and SrmB- binding site of polymerase A FD428_RS03230 PF01966 HD domain FD428_RS03230 PF01743 Poly A polymerase head domain FD428_RS03235 PF08239 Bacterial SH3 domain FD428_RS03240 PF01928 CYTH domain FD428_RS03245 PF03710 Glutamate-ammonia ligase adenylyltransferase FD428_RS03245 PF08335 GlnD PII-uridylyltransferase FD428_RS03250 PF00294 pfkB family carbohydrate kinase FD428_RS03250 PF01467 Cytidylyltransferase-like FD428_RS03255 PF08971 Glycogen synthesis protein FD428_RS03260 PF04380 Membrane fusogenic activity FD428_RS03265 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase FD428_RS03270 PF02535 ZIP Zinc transporter FD428_RS03275 PF02900 Catalytic LigB subunit of aromatic ring-opening dioxygenase FD428_RS03285 PF03738 Glutathionylspermidine synthase preATP-grasp FD428_RS03290 PF06693 Protein of unknown function (DUF1190) FD428_RS03295 PF02321 Outer membrane efflux protein FD428_RS03300 PF00293 NUDIX domain FD428_RS03305 PF06853 Protein of unknown function (DUF1249) FD428_RS03310 PF00149 Calcineurin-like phosphoesterase FD428_RS03315 PF05728 Uncharacterised protein family (UPF0227) FD428_RS03320 PF01751 Toprim domain FD428_RS03320 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS03320 PF00986 DNA gyrase B subunit, carboxyl terminus FD428_RS03320 PF00204 DNA gyrase B FD428_RS03325 PF12833 Helix-turn-helix domain FD428_RS03325 PF10114 Sensory domain found in PocR FD428_RS03335 PF01306 LacY proton/sugar symporter FD428_RS03340 PF07470 Glycosyl Hydrolase Family 88 FD428_RS03345 PF03992 Antibiotic biosynthesis monooxygenase FD428_RS03350 PF02525 Flavodoxin-like fold FD428_RS03355 PF08521 Two-component sensor kinase N-terminal FD428_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS03355 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS03360 PF00486 Transcriptional regulatory protein, C terminal FD428_RS03360 PF00072 Response regulator receiver domain FD428_RS03365 PF04076 Bacterial OB fold (BOF) protein FD428_RS03370 PF00521 DNA gyrase/topoisomerase IV, subunit A FD428_RS03370 PF03989 DNA gyrase C-terminal domain, beta-propeller FD428_RS03375 PF01553 Acyltransferase FD428_RS03380 PF07732 Multicopper oxidase FD428_RS03380 PF00394 Multicopper oxidase FD428_RS03380 PF07731 Multicopper oxidase FD428_RS03385 PF11842 Domain of unknown function (DUF3362) FD428_RS03385 PF04055 Radical SAM superfamily FD428_RS03385 PF08497 Radical SAM N-terminal FD428_RS03395 PF00248 Aldo/keto reductase family FD428_RS03400 PF00465 Iron-containing alcohol dehydrogenase FD428_RS03405 PF06719 AraC-type transcriptional regulator N-terminus FD428_RS03405 PF12833 Helix-turn-helix domain FD428_RS03410 PF09335 SNARE associated Golgi protein FD428_RS03415 PF01053 Cys/Met metabolism PLP-dependent enzyme FD428_RS03420 PF01618 MotA/TolQ/ExbB proton channel family FD428_RS03425 PF02472 Biopolymer transport protein ExbD/TolR FD428_RS03445 PF00248 Aldo/keto reductase family FD428_RS03450 PF01738 Dienelactone hydrolase family FD428_RS03455 PF00672 HAMP domain FD428_RS03455 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS03455 PF02203 Tar ligand binding domain homologue FD428_RS03460 PF11115 Protein of unknown function (DUF2623) FD428_RS03465 PF14720 NiFe/NiFeSe hydrogenase small subunit C-terminal FD428_RS03465 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FD428_RS03470 PF13247 4Fe-4S dicluster domain FD428_RS03475 PF03916 Polysulphide reductase, NrfD FD428_RS03480 PF00374 Nickel-dependent hydrogenase FD428_RS03485 PF01750 Hydrogenase maturation protease FD428_RS03490 PF11939 [NiFe]-hydrogenase assembly, chaperone, HybE FD428_RS03495 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FD428_RS03500 PF01455 HupF/HypC family FD428_RS03505 PF01497 Periplasmic binding protein FD428_RS03515 PF02798 Glutathione S-transferase, N-terminal domain FD428_RS03520 PF00384 Molybdopterin oxidoreductase FD428_RS03525 PF05257 CHAP domain FD428_RS03525 PF03738 Glutathionylspermidine synthase preATP-grasp FD428_RS03530 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS03530 PF00107 Zinc-binding dehydrogenase FD428_RS03535 PF06719 AraC-type transcriptional regulator N-terminus FD428_RS03535 PF12833 Helix-turn-helix domain FD428_RS03540 PF00561 alpha/beta hydrolase fold FD428_RS03545 PF00376 MerR family regulatory protein FD428_RS03555 PF13953 PapC C-terminal domain FD428_RS03555 PF13954 PapC N-terminal domain FD428_RS03555 PF00577 Outer membrane usher protein FD428_RS03560 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS03560 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS03575 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS03575 PF01627 Hpt domain FD428_RS03575 PF00072 Response regulator receiver domain FD428_RS03575 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS03575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS03580 PF00196 Bacterial regulatory proteins, luxR family FD428_RS03580 PF00072 Response regulator receiver domain FD428_RS03585 PF11769 Protein of unknown function (DUF3313) FD428_RS03590 PF11742 Protein of unknown function (DUF3302) FD428_RS03595 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS03595 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS03600 PF12833 Helix-turn-helix domain FD428_RS03605 PF03797 Autotransporter beta-domain FD428_RS03620 PF04474 Protein of unknown function (DUF554) FD428_RS03630 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FD428_RS03630 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FD428_RS03630 PF01276 Orn/Lys/Arg decarboxylase, major domain FD428_RS03635 PF03825 Nucleoside H+ symporter FD428_RS03640 PF11873 Membrane-bound lytic murein transglycosylase C, N-terminal domain FD428_RS03640 PF01464 Transglycosylase SLT domain FD428_RS03645 PF04362 Bacterial Fe(2+) trafficking FD428_RS03650 PF10576 Iron-sulfur binding domain of endonuclease III FD428_RS03650 PF00730 HhH-GPD superfamily base excision DNA repair protein FD428_RS03650 PF14815 NUDIX domain FD428_RS03650 PF00633 Helix-hairpin-helix motif FD428_RS03655 PF02390 Putative methyltransferase FD428_RS03660 PF04320 Protein with unknown function (DUF469) FD428_RS03665 PF11101 Protein of unknown function (DUF2884) FD428_RS03670 PF17763 Glutaminase/Asparaginase C-terminal domain FD428_RS03670 PF00710 Asparaginase, N-terminal FD428_RS03675 PF06969 HemN C-terminal domain FD428_RS03675 PF04055 Radical SAM superfamily FD428_RS03680 PF01725 Ham1 family FD428_RS03685 PF02594 Uncharacterised ACR, YggU family COG1872 FD428_RS03690 PF02325 YGGT family FD428_RS03695 PF01168 Alanine racemase, N-terminal domain FD428_RS03700 PF00437 Type II/IV secretion system protein FD428_RS03705 PF03652 Holliday junction resolvase FD428_RS03710 PF02622 Uncharacterized ACR, COG1678 FD428_RS03715 PF02955 Prokaryotic glutathione synthetase, ATP-grasp domain FD428_RS03715 PF02951 Prokaryotic glutathione synthetase, N-terminal domain FD428_RS03720 PF04452 RNA methyltransferase FD428_RS03725 PF04231 Endonuclease I FD428_RS03730 PF17283 SprT-like zinc ribbon domain FD428_RS03730 PF10263 SprT-like family FD428_RS03735 PF00083 Sugar (and other) transporter FD428_RS03740 PF02773 S-adenosylmethionine synthetase, C-terminal domain FD428_RS03740 PF02772 S-adenosylmethionine synthetase, central domain FD428_RS03740 PF00438 S-adenosylmethionine synthetase, N-terminal domain FD428_RS03750 PF11036 Virulence promoting factor FD428_RS03755 PF17944 Arginine decarboxylase C-terminal helical extension FD428_RS03755 PF17810 Arginine decarboxylase helical bundle domain FD428_RS03755 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FD428_RS03760 PF00491 Arginase family FD428_RS03765 PF03573 outer membrane porin, OprD family FD428_RS03770 PF01435 Peptidase family M48 FD428_RS03775 PF02779 Transketolase, pyrimidine binding domain FD428_RS03775 PF02780 Transketolase, C-terminal domain FD428_RS03775 PF00456 Transketolase, thiamine diphosphate binding domain FD428_RS03780 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS03785 PF02378 Phosphotransferase system, EIIC FD428_RS03785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS03790 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS03790 PF00107 Zinc-binding dehydrogenase FD428_RS03795 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FD428_RS03800 PF05068 Mannitol repressor FD428_RS03810 PF00005 ABC transporter FD428_RS03810 PF12558 ATP-binding cassette cobalt transporter FD428_RS03815 PF00005 ABC transporter FD428_RS03835 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD428_RS03835 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FD428_RS03840 PF00162 Phosphoglycerate kinase FD428_RS03845 PF01116 Fructose-bisphosphate aldolase class-II FD428_RS03850 PF00696 Amino acid kinase family FD428_RS03855 PF07690 Major Facilitator Superfamily FD428_RS03860 PF00549 CoA-ligase FD428_RS03860 PF02629 CoA binding domain FD428_RS03865 PF06545 Protein of unknown function (DUF1116) FD428_RS03870 PF11392 Protein of unknown function (DUF2877) FD428_RS03875 PF03466 LysR substrate binding domain FD428_RS03875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS03880 PF00924 Mechanosensitive ion channel FD428_RS03880 PF05552 Conserved TM helix FD428_RS03885 PF01810 LysE type translocator FD428_RS03890 PF04402 Protein of unknown function (DUF541) FD428_RS03895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS03895 PF03466 LysR substrate binding domain FD428_RS03900 PF06026 Ribose 5-phosphate isomerase A (phosphoriboisomerase A) FD428_RS03905 PF01842 ACT domain FD428_RS03905 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD428_RS03905 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FD428_RS03910 PF01812 5-formyltetrahydrofolate cyclo-ligase family FD428_RS03920 PF05164 Cell division protein ZapA FD428_RS03925 PF03695 Uncharacterised protein family (UPF0149) FD428_RS03930 PF00557 Metallopeptidase family M24 FD428_RS03930 PF05195 Aminopeptidase P, N-terminal domain FD428_RS03935 PF01494 FAD binding domain FD428_RS03940 PF01494 FAD binding domain FD428_RS03945 PF08669 Glycine cleavage T-protein C-terminal barrel domain FD428_RS03945 PF01571 Aminomethyltransferase folate-binding domain FD428_RS03950 PF01597 Glycine cleavage H-protein FD428_RS03955 PF02347 Glycine cleavage system P-protein FD428_RS03960 PF00232 Glycosyl hydrolase family 1 FD428_RS03965 PF01418 Helix-turn-helix domain, rpiR family FD428_RS03965 PF01380 SIS domain FD428_RS03970 PF04266 ASCH domain FD428_RS03975 PF03006 Haemolysin-III related FD428_RS03980 PF01571 Aminomethyltransferase folate-binding domain FD428_RS03985 PF03937 Flavinator of succinate dehydrogenase FD428_RS03990 PF07254 Membrane-bound toxin component of toxin-antitoxin system FD428_RS03995 PF00258 Flavodoxin FD428_RS04000 PF00589 Phage integrase family FD428_RS04000 PF02899 Phage integrase, N-terminal SAM-like domain FD428_RS04005 PF10411 Disulfide bond isomerase protein N-terminus FD428_RS04005 PF13098 Thioredoxin-like domain FD428_RS04010 PF01368 DHH family FD428_RS04010 PF17768 RecJ OB domain FD428_RS04010 PF02272 DHHA1 domain FD428_RS04020 PF00152 tRNA synthetases class II (D, K and N) FD428_RS04020 PF01336 OB-fold nucleic acid binding domain FD428_RS04030 PF00293 NUDIX domain FD428_RS04035 PF01476 LysM domain FD428_RS04035 PF01551 Peptidase family M23 FD428_RS04060 PF02589 LUD domain FD428_RS04065 PF02589 LUD domain FD428_RS04065 PF13183 4Fe-4S dicluster domain FD428_RS04065 PF11870 Domain of unknown function (DUF3390) FD428_RS04070 PF02754 Cysteine-rich domain FD428_RS04075 PF02652 L-lactate permease FD428_RS04080 PF06902 Divergent 4Fe-4S mono-cluster FD428_RS04085 PF14542 GCN5-related N-acetyl-transferase FD428_RS04090 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS04090 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS04100 PF13954 PapC N-terminal domain FD428_RS04100 PF13953 PapC C-terminal domain FD428_RS04100 PF00577 Outer membrane usher protein FD428_RS04105 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS04105 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS04115 PF03824 High-affinity nickel-transport protein FD428_RS04120 PF02583 Metal-sensitive transcriptional repressor FD428_RS04125 PF00196 Bacterial regulatory proteins, luxR family FD428_RS04140 PF03222 Tryptophan/tyrosine permease family FD428_RS04150 PF03466 LysR substrate binding domain FD428_RS04150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS04155 PF02803 Thiolase, C-terminal domain FD428_RS04155 PF00108 Thiolase, N-terminal domain FD428_RS04160 PF04962 KduI/IolB family FD428_RS04175 PF01177 Asp/Glu/Hydantoin racemase FD428_RS04180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS04180 PF03466 LysR substrate binding domain FD428_RS04185 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain FD428_RS04185 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain FD428_RS04190 PF00356 Bacterial regulatory proteins, lacI family FD428_RS04195 PF00356 Bacterial regulatory proteins, lacI family FD428_RS04205 PF01553 Acyltransferase FD428_RS04205 PF00501 AMP-binding enzyme FD428_RS04210 PF07690 Major Facilitator Superfamily FD428_RS04220 PF00248 Aldo/keto reductase family FD428_RS04225 PF06004 Bacterial protein of unknown function (DUF903) FD428_RS04230 PF03741 Integral membrane protein TerC family FD428_RS04235 PF02976 DNA mismatch repair enzyme MutH FD428_RS04240 PF00293 NUDIX domain FD428_RS04245 PF01590 GAF domain FD428_RS04245 PF05524 PEP-utilising enzyme, N-terminal FD428_RS04245 PF00391 PEP-utilising enzyme, mobile domain FD428_RS04245 PF02896 PEP-utilising enzyme, TIM barrel domain FD428_RS04250 PF01790 Prolipoprotein diacylglyceryl transferase FD428_RS04255 PF00303 Thymidylate synthase FD428_RS04260 PF07963 Prokaryotic N-terminal methylation motif FD428_RS04265 PF07963 Prokaryotic N-terminal methylation motif FD428_RS04270 PF10713 Protein of unknown function (DUF2509) FD428_RS04275 PF07963 Prokaryotic N-terminal methylation motif FD428_RS04275 PF12528 Type II secretion prepilin peptidase dependent protein C FD428_RS04280 PF17946 RecC C-terminal domain FD428_RS04285 PF00675 Insulinase (Peptidase family M16) FD428_RS04285 PF16187 Middle or third domain of peptidase_M16 FD428_RS04285 PF05193 Peptidase M16 inactive domain FD428_RS04290 PF13361 UvrD-like helicase C-terminal domain FD428_RS04290 PF00580 UvrD/REP helicase N-terminal domain FD428_RS04290 PF12705 PD-(D/E)XK nuclease superfamily FD428_RS04295 PF13538 UvrD-like helicase C-terminal domain FD428_RS04300 PF00583 Acetyltransferase (GNAT) family FD428_RS04300 PF00696 Amino acid kinase family FD428_RS04305 PF01520 N-acetylmuramoyl-L-alanine amidase FD428_RS04305 PF11741 AMIN domain FD428_RS04325 PF03562 MltA specific insert domain FD428_RS04325 PF06725 3D domain FD428_RS04330 PF00899 ThiF family FD428_RS04335 PF02657 Fe-S metabolism associated domain FD428_RS04340 PF00266 Aminotransferase class-V FD428_RS04345 PF06004 Bacterial protein of unknown function (DUF903) FD428_RS04350 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS04350 PF03466 LysR substrate binding domain FD428_RS04355 PF04241 Protein of unknown function (DUF423) FD428_RS04360 PF18125 RlmM ferredoxin-like domain FD428_RS04360 PF01728 FtsJ-like methyltransferase FD428_RS04365 PF00455 DeoR C terminal sensor domain FD428_RS04365 PF08220 DeoR-like helix-turn-helix domain FD428_RS04370 PF05025 RbsD / FucU transport protein family FD428_RS04375 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS04375 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS04380 PF02952 L-fucose isomerase, C-terminal domain FD428_RS04380 PF07881 L-fucose isomerase, first N-terminal domain FD428_RS04380 PF07882 L-fucose isomerase, second N-terminal domain FD428_RS04385 PF07690 Major Facilitator Superfamily FD428_RS04400 PF00596 Class II Aldolase and Adducin N-terminal domain FD428_RS04405 PF00465 Iron-containing alcohol dehydrogenase FD428_RS04410 PF01367 5'-3' exonuclease, C-terminal SAM fold FD428_RS04410 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FD428_RS04415 PF03313 Serine dehydratase alpha chain FD428_RS04415 PF03315 Serine dehydratase beta chain FD428_RS04425 PF11892 Domain of unknown function (DUF3412) FD428_RS04425 PF14793 Pyrimidine/purine nucleotide 5'-monophosphate nucleosidases FD428_RS04425 PF03641 Possible lysine decarboxylase FD428_RS04430 PF14819 Nitrile reductase, 7-cyano-7-deazaguanine-reductase N-term FD428_RS04430 PF14489 QueF-like protein FD428_RS04435 PF07348 Syd protein (SUKH-2) FD428_RS04440 PF04287 tRNA pseudouridine synthase C FD428_RS04445 PF00849 RNA pseudouridylate synthase FD428_RS04450 PF00258 Flavodoxin FD428_RS04455 PF07690 Major Facilitator Superfamily FD428_RS04460 PF13378 Enolase C-terminal domain-like FD428_RS04460 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD428_RS04465 PF13378 Enolase C-terminal domain-like FD428_RS04470 PF02595 Glycerate kinase family FD428_RS04475 PF09984 Uncharacterised signal transduction histidine kinase domain (DUF2222) FD428_RS04475 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS04475 PF00672 HAMP domain FD428_RS04475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS04475 PF01627 Hpt domain FD428_RS04475 PF00072 Response regulator receiver domain FD428_RS04480 PF01938 TRAM domain FD428_RS04480 PF05958 tRNA (Uracil-5-)-methyltransferase FD428_RS04485 PF04607 Region found in RelA / SpoT proteins FD428_RS04485 PF02824 TGS domain FD428_RS04485 PF13291 ACT domain FD428_RS04490 PF03819 MazG nucleotide pyrophosphohydrolase domain FD428_RS04495 PF06418 CTP synthase N-terminus FD428_RS04495 PF00117 Glutamine amidotransferase class-I FD428_RS04500 PF03952 Enolase, N-terminal domain FD428_RS04500 PF00113 Enolase, C-terminal TIM barrel domain FD428_RS04520 PF04055 Radical SAM superfamily FD428_RS04525 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS04525 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS04530 PF07690 Major Facilitator Superfamily FD428_RS04540 PF01565 FAD binding domain FD428_RS04540 PF02913 FAD linked oxidases, C-terminal domain FD428_RS04545 PF00083 Sugar (and other) transporter FD428_RS04550 PF01012 Electron transfer flavoprotein domain FD428_RS04555 PF01012 Electron transfer flavoprotein domain FD428_RS04555 PF00766 Electron transfer flavoprotein FAD-binding domain FD428_RS04560 PF04309 Glycerol-3-phosphate responsive antiterminator FD428_RS04570 PF01266 FAD dependent oxidoreductase FD428_RS04575 PF01242 6-pyruvoyl tetrahydropterin synthase FD428_RS04580 PF00175 Oxidoreductase NAD-binding domain FD428_RS04580 PF00258 Flavodoxin FD428_RS04580 PF00667 FAD binding domain FD428_RS04595 PF01507 Phosphoadenosine phosphosulfate reductase family FD428_RS04600 PF04389 Peptidase family M28 FD428_RS04605 PF01507 Phosphoadenosine phosphosulfate reductase family FD428_RS04610 PF00009 Elongation factor Tu GTP binding domain FD428_RS04620 PF12084 Protein of unknown function (DUF3561) FD428_RS04625 PF04977 Septum formation initiator FD428_RS04630 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase FD428_RS04635 PF02542 YgbB family FD428_RS04640 PF01142 tRNA pseudouridine synthase D (TruD) FD428_RS04645 PF01975 Survival protein SurE FD428_RS04655 PF01476 LysM domain FD428_RS04655 PF01551 Peptidase family M23 FD428_RS04660 PF00140 Sigma-70 factor, region 1.2 FD428_RS04660 PF04542 Sigma-70 region 2 FD428_RS04660 PF04539 Sigma-70 region 3 FD428_RS04660 PF04545 Sigma-70, region 4 FD428_RS04665 PF01047 MarR family FD428_RS04670 PF02441 Flavoprotein FD428_RS04675 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FD428_RS04685 PF01624 MutS domain I FD428_RS04685 PF05188 MutS domain II FD428_RS04685 PF00488 MutS domain V FD428_RS04685 PF05192 MutS domain III FD428_RS04685 PF05190 MutS family domain IV FD428_RS04690 PF00950 ABC 3 transport family FD428_RS04695 PF00950 ABC 3 transport family FD428_RS04700 PF00005 ABC transporter FD428_RS04705 PF01297 Zinc-uptake complex component A periplasmic FD428_RS04710 PF11756 Nitrous oxide-stimulated promoter FD428_RS04715 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS04715 PF03459 TOBE domain FD428_RS04720 PF01590 GAF domain FD428_RS04720 PF02954 Bacterial regulatory protein, Fis family FD428_RS04720 PF00158 Sigma-54 interaction domain FD428_RS04725 PF00586 AIR synthase related protein, N-terminal domain FD428_RS04725 PF02769 AIR synthase related protein, C-terminal domain FD428_RS04730 PF01924 Hydrogenase formation hypA family FD428_RS04735 PF01455 HupF/HypC family FD428_RS04740 PF02492 CobW/HypB/UreG, nucleotide-binding domain FD428_RS04745 PF01155 Hydrogenase/urease nickel incorporation, metallochaperone, hypA FD428_RS04750 PF11046 Transcriptional repressor of hyc and hyp operons FD428_RS04755 PF13247 4Fe-4S dicluster domain FD428_RS04760 PF00361 Proton-conducting membrane transporter FD428_RS04765 PF00146 NADH dehydrogenase FD428_RS04770 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FD428_RS04770 PF00374 Nickel-dependent hydrogenase FD428_RS04770 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FD428_RS04775 PF12838 4Fe-4S dicluster domain FD428_RS04780 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FD428_RS04785 PF07450 Formate hydrogenlyase maturation protein HycH FD428_RS04790 PF01750 Hydrogenase maturation protease FD428_RS04795 PF00232 Glycosyl hydrolase family 1 FD428_RS04800 PF00367 phosphotransferase system, EIIB FD428_RS04800 PF02378 Phosphotransferase system, EIIC FD428_RS04805 PF00356 Bacterial regulatory proteins, lacI family FD428_RS04810 PF12800 4Fe-4S binding domain FD428_RS04810 PF13247 4Fe-4S dicluster domain FD428_RS04815 PF07503 HypF finger FD428_RS04815 PF01300 Telomere recombination FD428_RS04815 PF00708 Acylphosphatase FD428_RS04815 PF17788 HypF Kae1-like domain FD428_RS04825 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS04825 PF18113 Rubredoxin binding C-terminal domain FD428_RS04830 PF00258 Flavodoxin FD428_RS04830 PF00301 Rubredoxin FD428_RS04830 PF00753 Metallo-beta-lactamase superfamily FD428_RS04835 PF01590 GAF domain FD428_RS04835 PF00158 Sigma-54 interaction domain FD428_RS04840 PF00571 CBS domain FD428_RS04840 PF01380 SIS domain FD428_RS04845 PF08220 DeoR-like helix-turn-helix domain FD428_RS04845 PF00455 DeoR C terminal sensor domain FD428_RS04850 PF06923 Glucitol operon activator protein (GutM) FD428_RS04855 PF00106 short chain dehydrogenase FD428_RS04860 PF03829 PTS system glucitol/sorbitol-specific IIA component FD428_RS04865 PF03612 Sorbitol phosphotransferase enzyme II N-terminus FD428_RS04865 PF07663 Sorbitol phosphotransferase enzyme II C-terminus FD428_RS04870 PF03608 PTS system enzyme II sorbitol-specific factor FD428_RS04875 PF13406 Transglycosylase SLT domain FD428_RS04880 PF00005 ABC transporter FD428_RS04885 PF00950 ABC 3 transport family FD428_RS04890 PF01297 Zinc-uptake complex component A periplasmic FD428_RS04895 PF02464 Competence-damaged protein FD428_RS04900 PF00154 recA bacterial DNA recombination protein FD428_RS04905 PF02631 RecX family FD428_RS04910 PF02272 DHHA1 domain FD428_RS04910 PF01411 tRNA synthetases class II (A) FD428_RS04910 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FD428_RS04915 PF02599 Global regulator protein family FD428_RS04945 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS04950 PF09335 SNARE associated Golgi protein FD428_RS04955 PF04262 Glutamate-cysteine ligase FD428_RS04960 PF02664 S-Ribosylhomocysteinase (LuxS) FD428_RS04965 PF07690 Major Facilitator Superfamily FD428_RS04970 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS04970 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS04975 PF01047 MarR family FD428_RS04980 PF05437 Branched-chain amino acid transport protein (AzlD) FD428_RS04985 PF03591 AzlC protein FD428_RS04990 PF07690 Major Facilitator Superfamily FD428_RS04995 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FD428_RS05000 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS05005 PF00005 ABC transporter FD428_RS05005 PF00571 CBS domain FD428_RS05010 PF00268 Ribonucleotide reductase, small chain FD428_RS05015 PF02867 Ribonucleotide reductase, barrel domain FD428_RS05015 PF00317 Ribonucleotide reductase, all-alpha domain FD428_RS05015 PF08343 Ribonucleotide reductase N-terminal FD428_RS05020 PF07972 NrdI Flavodoxin like FD428_RS05025 PF00462 Glutaredoxin FD428_RS05030 PF02627 Carboxymuconolactone decarboxylase family FD428_RS05035 PF00155 Aminotransferase class I and II FD428_RS05035 PF00392 Bacterial regulatory proteins, gntR family FD428_RS05040 PF05957 Bacterial protein of unknown function (DUF883) FD428_RS05045 PF09400 Protein of unknown function (DUF2002) FD428_RS05050 PF06610 L-alanine exporter FD428_RS05055 PF00816 H-NS histone family FD428_RS05060 PF00581 Rhodanese-like domain FD428_RS05060 PF11127 Protein of unknown function (DUF2892) FD428_RS05065 PF04972 BON domain FD428_RS05065 PF01476 LysM domain FD428_RS05070 PF07729 FCD domain FD428_RS05070 PF00392 Bacterial regulatory proteins, gntR family FD428_RS05075 PF00324 Amino acid permease FD428_RS05080 PF00202 Aminotransferase class-III FD428_RS05085 PF00171 Aldehyde dehydrogenase family FD428_RS05090 PF01266 FAD dependent oxidoreductase FD428_RS05095 PF08943 CsiD FD428_RS05105 PF01970 Tripartite tricarboxylate transporter TctA family FD428_RS05120 PF00486 Transcriptional regulatory protein, C terminal FD428_RS05120 PF00072 Response regulator receiver domain FD428_RS05125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS05125 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS05150 PF00171 Aldehyde dehydrogenase family FD428_RS05155 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS05155 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS05155 PF00205 Thiamine pyrophosphate enzyme, central domain FD428_RS05160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS05160 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD428_RS05165 PF13407 Periplasmic binding protein domain FD428_RS05170 PF00005 ABC transporter FD428_RS05175 PF02653 Branched-chain amino acid transport system / permease component FD428_RS05180 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS05180 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD428_RS05185 PF00294 pfkB family carbohydrate kinase FD428_RS05190 PF01261 Xylose isomerase-like TIM barrel FD428_RS05195 PF04962 KduI/IolB family FD428_RS05200 PF08447 PAS fold FD428_RS05200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS05210 PF00005 ABC transporter FD428_RS05215 PF02653 Branched-chain amino acid transport system / permease component FD428_RS05230 PF01636 Phosphotransferase enzyme family FD428_RS05235 PF01008 Initiation factor 2 subunit family FD428_RS05240 PF03079 ARD/ARD' family FD428_RS05250 PF00596 Class II Aldolase and Adducin N-terminal domain FD428_RS05255 PF07274 Protein of unknown function (DUF1440) FD428_RS05265 PF06183 DinI-like family FD428_RS05280 PF13356 Arm DNA-binding domain FD428_RS05280 PF00589 Phage integrase family FD428_RS05285 PF06755 CbtA_toxin of type IV toxin-antitoxin system FD428_RS05290 PF06154 CbeA_antitoxin, type IV, cytoskeleton bundling-enhancing factor A FD428_RS05295 PF06174 Protein of unknown function (DUF987) FD428_RS05300 PF04002 RadC-like JAB domain FD428_RS05305 PF03230 Antirestriction protein FD428_RS05310 PF06006 Bacterial protein of unknown function (DUF905) FD428_RS05330 PF13280 WYL domain FD428_RS05330 PF08220 DeoR-like helix-turn-helix domain FD428_RS05340 PF01926 50S ribosome-binding GTPase FD428_RS05350 PF01734 Patatin-like phospholipase FD428_RS05440 PF00589 Phage integrase family FD428_RS05440 PF13356 Arm DNA-binding domain FD428_RS05450 PF01668 SmpB protein FD428_RS05455 PF03364 Polyketide cyclase / dehydrase and lipid transport FD428_RS05460 PF03658 RnfH family Ubiquitin FD428_RS05465 PF04355 SmpA / OmlA family FD428_RS05470 PF02463 RecF/RecN/SMC N terminal domain FD428_RS05475 PF01513 ATP-NAD kinase FD428_RS05480 PF01025 GrpE FD428_RS05485 PF03471 Transporter associated domain FD428_RS05485 PF00571 CBS domain FD428_RS05485 PF01595 Cyclin M transmembrane N-terminal domain FD428_RS05490 PF01578 Cytochrome C assembly protein FD428_RS05495 PF02978 Signal peptide binding domain FD428_RS05495 PF02881 SRP54-type protein, helical bundle domain FD428_RS05495 PF00448 SRP54-type protein, GTPase domain FD428_RS05500 PF00886 Ribosomal protein S16 FD428_RS05505 PF01782 RimM N-terminal domain FD428_RS05505 PF05239 PRC-barrel domain FD428_RS05510 PF01746 tRNA (Guanine-1)-methyltransferase FD428_RS05515 PF01245 Ribosomal protein L19 FD428_RS05530 PF00691 OmpA family FD428_RS05535 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS05535 PF17152 Periplasmic sensor domain FD428_RS05540 PF13689 YfiR/HmsC-like FD428_RS05545 PF10973 Protein of unknown function (DUF2799) FD428_RS05555 PF00793 DAHP synthetase I family FD428_RS05560 PF01817 Chorismate mutase type II FD428_RS05560 PF02153 Prephenate dehydrogenase FD428_RS05565 PF00800 Prephenate dehydratase FD428_RS05565 PF01817 Chorismate mutase type II FD428_RS05575 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein FD428_RS05580 PF13525 Outer membrane lipoprotein FD428_RS05585 PF01479 S4 domain FD428_RS05585 PF00849 RNA pseudouridylate synthase FD428_RS05590 PF02578 Multi-copper polyphenol oxidoreductase laccase FD428_RS05595 PF10431 C-terminal, D2-small domain, of ClpB protein FD428_RS05595 PF00004 ATPase family associated with various cellular activities (AAA) FD428_RS05595 PF17871 AAA lid domain FD428_RS05595 PF02861 Clp amino terminal domain, pathogenicity island component FD428_RS05595 PF07724 AAA domain (Cdc48 subfamily) FD428_RS05620 PF00083 Sugar (and other) transporter FD428_RS05625 PF10043 Predicted periplasmic lipoprotein (DUF2279) FD428_RS05630 PF13091 PLD-like domain FD428_RS05635 PF00583 Acetyltransferase (GNAT) family FD428_RS05635 PF13380 CoA binding domain FD428_RS05635 PF13607 Succinyl-CoA ligase like flavodoxin domain FD428_RS05640 PF03942 DTW domain FD428_RS05645 PF00085 Thioredoxin FD428_RS05650 PF08032 RNA 2'-O ribose methyltransferase substrate binding FD428_RS05650 PF00588 SpoU rRNA Methylase family FD428_RS05655 PF03167 Uracil DNA glycosylase superfamily FD428_RS05660 PF01228 Glycine radical FD428_RS05665 PF00271 Helicase conserved C-terminal domain FD428_RS05665 PF00270 DEAD/DEAH box helicase FD428_RS05670 PF05175 Methyltransferase small domain FD428_RS05675 PF00890 FAD binding domain FD428_RS05675 PF02910 Fumarate reductase flavoprotein C-term FD428_RS05685 PF08281 Sigma-70, region 4 FD428_RS05685 PF04542 Sigma-70 region 2 FD428_RS05690 PF03872 Anti sigma-E protein RseA, N-terminal domain FD428_RS05690 PF03873 Anti sigma-E protein RseA, C-terminal domain FD428_RS05695 PF17188 MucB/RseB C-terminal domain FD428_RS05695 PF03888 MucB/RseB N-terminal domain FD428_RS05705 PF00679 Elongation factor G C-terminus FD428_RS05705 PF00009 Elongation factor Tu GTP binding domain FD428_RS05705 PF03144 Elongation factor Tu domain 2 FD428_RS05705 PF06421 GTP-binding protein LepA C-terminus FD428_RS05710 PF10502 Signal peptidase, peptidase S26 FD428_RS05715 PF14622 Ribonuclease-III-like FD428_RS05715 PF00035 Double-stranded RNA binding motif FD428_RS05720 PF07650 KH domain FD428_RS05720 PF01926 50S ribosome-binding GTPase FD428_RS05725 PF02565 Recombination protein O C terminal FD428_RS05725 PF11967 Recombination protein O N terminal FD428_RS05730 PF03740 Pyridoxal phosphate biosynthesis protein PdxJ FD428_RS05735 PF01648 4'-phosphopantetheinyl transferase superfamily FD428_RS05740 PF12838 4Fe-4S dicluster domain FD428_RS05745 PF01380 SIS domain FD428_RS05745 PF01418 Helix-turn-helix domain, rpiR family FD428_RS05750 PF01380 SIS domain FD428_RS05760 PF14437 MafB19-like deaminase FD428_RS05765 PF01464 Transglycosylase SLT domain FD428_RS05765 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS05775 PF02769 AIR synthase related protein, C-terminal domain FD428_RS05775 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain FD428_RS05775 PF18076 Formylglycinamide ribonucleotide amidotransferase N-terminal FD428_RS05785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS05785 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS05790 PF13942 YfhG lipoprotein FD428_RS05795 PF00158 Sigma-54 interaction domain FD428_RS05795 PF00072 Response regulator receiver domain FD428_RS05800 PF00543 Nitrogen regulatory protein P-II FD428_RS05805 PF00970 Oxidoreductase FAD-binding domain FD428_RS05805 PF00042 Globin FD428_RS05805 PF00175 Oxidoreductase NAD-binding domain FD428_RS05810 PF00464 Serine hydroxymethyltransferase FD428_RS05815 PF00480 ROK family FD428_RS05820 PF17128 Domain of unknown function (DUF5107) FD428_RS05820 PF13181 Tetratricopeptide repeat FD428_RS05825 PF00083 Sugar (and other) transporter FD428_RS05830 PF01263 Aldose 1-epimerase FD428_RS05835 PF12832 MFS_1 like family FD428_RS05840 PF00874 PRD domain FD428_RS05845 PF06226 Protein of unknown function (DUF1007) FD428_RS05850 PF03824 High-affinity nickel-transport protein FD428_RS05855 PF00459 Inositol monophosphatase family FD428_RS05860 PF00588 SpoU rRNA Methylase family FD428_RS05865 PF02082 Transcriptional regulator FD428_RS05870 PF00266 Aminotransferase class-V FD428_RS05875 PF01592 NifU-like N terminal domain FD428_RS05880 PF01521 Iron-sulphur cluster biosynthesis FD428_RS05885 PF07743 HSCB C-terminal oligomerisation domain FD428_RS05890 PF00012 Hsp70 protein FD428_RS05895 PF00111 2Fe-2S iron-sulfur cluster binding domain FD428_RS05900 PF04384 Iron-sulphur cluster assembly FD428_RS05905 PF12404 Peptidase FD428_RS05905 PF00883 Cytosol aminopeptidase family, catalytic domain FD428_RS05910 PF07179 SseB protein N-terminal domain FD428_RS05910 PF14581 SseB protein C-terminal domain FD428_RS05915 PF00581 Rhodanese-like domain FD428_RS05920 PF17973 Bacterial Alpha-2-macroglobulin MG10 domain FD428_RS05920 PF07678 A-macroglobulin TED domain FD428_RS05920 PF01835 MG2 domain FD428_RS05920 PF17970 Bacterial Alpha-2-macroglobulin MG1 domain FD428_RS05920 PF07703 Alpha-2-macroglobulin bait region domain FD428_RS05920 PF11974 Bacterial alpha-2-macroglobulin MG3 domain FD428_RS05920 PF17962 Bacterial macroglobulin domain 6 FD428_RS05920 PF00207 Alpha-2-macroglobulin family FD428_RS05920 PF17972 Bacterial Alpha-2-macroglobulin MG5 domain FD428_RS05925 PF00905 Penicillin binding protein transpeptidase domain FD428_RS05925 PF00912 Transglycosylase FD428_RS05925 PF06832 Penicillin-Binding Protein C-terminus Family FD428_RS05930 PF00334 Nucleoside diphosphate kinase FD428_RS05935 PF04055 Radical SAM superfamily FD428_RS05940 PF13464 Domain of unknown function (DUF4115) FD428_RS05945 PF04551 GcpE protein FD428_RS05950 PF13393 Histidyl-tRNA synthetase FD428_RS05950 PF03129 Anticodon binding domain FD428_RS05955 PF09976 Tetratricopeptide repeat-like domain FD428_RS05960 PF13360 PQQ-like domain FD428_RS05965 PF01926 50S ribosome-binding GTPase FD428_RS05965 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal FD428_RS06000 PF00854 POT family FD428_RS06005 PF07191 zinc-ribbons FD428_RS06010 PF02601 Exonuclease VII, large subunit FD428_RS06010 PF13742 OB-fold nucleic acid binding domain FD428_RS06015 PF00571 CBS domain FD428_RS06015 PF00478 IMP dehydrogenase / GMP reductase domain FD428_RS06020 PF02540 NAD synthase FD428_RS06020 PF00958 GMP synthase C terminal domain FD428_RS06020 PF00117 Glutamine amidotransferase class-I FD428_RS06035 PF11119 Protein of unknown function (DUF2633) FD428_RS06040 PF05231 MASE1 FD428_RS06040 PF00563 EAL domain FD428_RS06045 PF02541 Ppx/GppA phosphatase family FD428_RS06050 PF13089 Polyphosphate kinase N-terminal domain FD428_RS06050 PF17941 Polyphosphate kinase C-terminal domain 1 FD428_RS06050 PF02503 Polyphosphate kinase middle domain FD428_RS06050 PF13090 Polyphosphate kinase C-terminal domain 2 FD428_RS06055 PF00551 Formyl transferase FD428_RS06060 PF00586 AIR synthase related protein, N-terminal domain FD428_RS06060 PF02769 AIR synthase related protein, C-terminal domain FD428_RS06065 PF00232 Glycosyl hydrolase family 1 FD428_RS06075 PF00860 Permease family FD428_RS06080 PF00308 Bacterial dnaA protein FD428_RS06085 PF00883 Cytosol aminopeptidase family, catalytic domain FD428_RS06085 PF02789 Cytosol aminopeptidase family, N-terminal domain FD428_RS06090 PF01112 Asparaginase FD428_RS06095 PF02378 Phosphotransferase system, EIIC FD428_RS06105 PF03960 ArsC family FD428_RS06110 PF01435 Peptidase family M48 FD428_RS06115 PF01594 AI-2E family transporter FD428_RS06120 PF07670 Nucleoside recognition FD428_RS06125 PF07670 Nucleoside recognition FD428_RS06130 PF01979 Amidohydrolase family FD428_RS06135 PF00578 AhpC/TSA family FD428_RS06140 PF01842 ACT domain FD428_RS06145 PF00701 Dihydrodipicolinate synthetase family FD428_RS06150 PF06804 NlpB/DapX lipoprotein FD428_RS06155 PF01259 SAICAR synthetase FD428_RS06160 PF04228 Putative neutral zinc metallopeptidase FD428_RS06165 PF08351 Domain of unknown function (DUF1726) FD428_RS06165 PF13718 GNAT acetyltransferase 2 FD428_RS06165 PF05127 Helicase FD428_RS06165 PF17176 tRNA-binding domain FD428_RS06170 PF02230 Phospholipase/Carboxylesterase FD428_RS06175 PF13980 Uncharacterised protein family (UPF0370) FD428_RS06180 PF07687 Peptidase dimerisation domain FD428_RS06180 PF01546 Peptidase family M20/M25/M40 FD428_RS06185 PF03960 ArsC family FD428_RS06195 PF00873 AcrB/AcrD/AcrF family FD428_RS06200 PF00672 HAMP domain FD428_RS06200 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FD428_RS06200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS06200 PF07730 Histidine kinase FD428_RS06205 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster FD428_RS06205 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS06205 PF13247 4Fe-4S dicluster domain FD428_RS06210 PF00293 NUDIX domain FD428_RS06215 PF06674 Protein of unknown function (DUF1176) FD428_RS06220 PF00456 Transketolase, thiamine diphosphate binding domain FD428_RS06220 PF02780 Transketolase, C-terminal domain FD428_RS06220 PF02779 Transketolase, pyrimidine binding domain FD428_RS06225 PF00923 Transaldolase/Fructose-6-phosphate aldolase FD428_RS06230 PF03949 Malic enzyme, NAD binding domain FD428_RS06230 PF01515 Phosphate acetyl/butaryl transferase FD428_RS06230 PF00390 Malic enzyme, N-terminal domain FD428_RS06235 PF00936 BMC domain FD428_RS06240 PF10662 Ethanolamine utilisation - propanediol utilisation FD428_RS06245 PF06249 Ethanolamine utilisation protein EutQ FD428_RS06250 PF01923 Cobalamin adenosyltransferase FD428_RS06255 PF01515 Phosphate acetyl/butaryl transferase FD428_RS06260 PF00936 BMC domain FD428_RS06265 PF03319 Ethanolamine utilisation protein EutN/carboxysome FD428_RS06270 PF00171 Aldehyde dehydrogenase family FD428_RS06280 PF00465 Iron-containing alcohol dehydrogenase FD428_RS06285 PF04346 Ethanolamine utilisation protein, EutH FD428_RS06290 PF06277 Ethanolamine utilisation protein EutA FD428_RS06295 PF06751 Ethanolamine ammonia lyase large subunit (EutB) FD428_RS06300 PF05985 Ethanolamine ammonia-lyase light chain (EutC) FD428_RS06305 PF00936 BMC domain FD428_RS06310 PF00936 BMC domain FD428_RS06310 PF16365 Ethanolamine utilization protein EutK C-terminus FD428_RS06315 PF12833 Helix-turn-helix domain FD428_RS06320 PF01218 Coproporphyrinogen III oxidase FD428_RS06325 PF01520 N-acetylmuramoyl-L-alanine amidase FD428_RS06330 PF00583 Acetyltransferase (GNAT) family FD428_RS06335 PF11143 Protein of unknown function (DUF2919) FD428_RS06340 PF06572 Protein of unknown function (DUF1131) FD428_RS06345 PF04261 Dyp-type peroxidase family FD428_RS06350 PF00144 Beta-lactamase FD428_RS06355 PF00367 phosphotransferase system, EIIB FD428_RS06355 PF02378 Phosphotransferase system, EIIC FD428_RS06360 PF01380 SIS domain FD428_RS06365 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FD428_RS06375 PF01418 Helix-turn-helix domain, rpiR family FD428_RS06375 PF01380 SIS domain FD428_RS06390 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS06395 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS06400 PF00005 ABC transporter FD428_RS06405 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS06410 PF00117 Glutamine amidotransferase class-I FD428_RS06415 PF00155 Aminotransferase class I and II FD428_RS06415 PF00392 Bacterial regulatory proteins, gntR family FD428_RS06420 PF08543 Phosphomethylpyrimidine kinase FD428_RS06430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FD428_RS06435 PF02896 PEP-utilising enzyme, TIM barrel domain FD428_RS06435 PF00391 PEP-utilising enzyme, mobile domain FD428_RS06435 PF05524 PEP-utilising enzyme, N-terminal FD428_RS06440 PF00381 PTS HPr component phosphorylation site FD428_RS06445 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS06455 PF04354 ZipA, C-terminal FtsZ-binding domain FD428_RS06460 PF03119 NAD-dependent DNA ligase C4 zinc finger domain FD428_RS06460 PF01653 NAD-dependent DNA ligase adenylation domain FD428_RS06460 PF00533 BRCA1 C Terminus (BRCT) domain FD428_RS06460 PF12826 Helix-hairpin-helix motif FD428_RS06460 PF03120 NAD-dependent DNA ligase OB-fold domain FD428_RS06465 PF12843 Putative quorum-sensing-regulated virulence factor FD428_RS06470 PF13593 SBF-like CPA transporter family (DUF4137) FD428_RS06475 PF03466 LysR substrate binding domain FD428_RS06475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS06485 PF01048 Phosphorylase superfamily FD428_RS06490 PF03825 Nucleoside H+ symporter FD428_RS06495 PF03466 LysR substrate binding domain FD428_RS06495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS06535 PF00749 tRNA synthetases class I (E and Q), catalytic domain FD428_RS06540 PF07037 Putative transcription regulator (DUF1323) FD428_RS06545 PF07037 Putative transcription regulator (DUF1323) FD428_RS06560 PF00563 EAL domain FD428_RS06560 PF05231 MASE1 FD428_RS06565 PF01773 Na+ dependent nucleoside transporter N-terminus FD428_RS06565 PF07662 Na+ dependent nucleoside transporter C-terminus FD428_RS06565 PF07670 Nucleoside recognition FD428_RS06570 PF01566 Natural resistance-associated macrophage protein FD428_RS06575 PF10697 Protein of unknown function (DUF2502) FD428_RS06580 PF00248 Aldo/keto reductase family FD428_RS06585 PF00205 Thiamine pyrophosphate enzyme, central domain FD428_RS06585 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS06585 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS06590 PF00654 Voltage gated chloride channel FD428_RS06595 PF02685 Glucokinase FD428_RS06600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS06605 PF02378 Phosphotransferase system, EIIC FD428_RS06610 PF01321 Creatinase/Prolidase N-terminal domain FD428_RS06610 PF00557 Metallopeptidase family M24 FD428_RS06615 PF05343 M42 glutamyl aminopeptidase FD428_RS06620 PF05524 PEP-utilising enzyme, N-terminal FD428_RS06620 PF02896 PEP-utilising enzyme, TIM barrel domain FD428_RS06620 PF00391 PEP-utilising enzyme, mobile domain FD428_RS06620 PF00381 PTS HPr component phosphorylation site FD428_RS06620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS06625 PF12833 Helix-turn-helix domain FD428_RS06630 PF04397 LytTr DNA-binding domain FD428_RS06630 PF00072 Response regulator receiver domain FD428_RS06635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS06635 PF07694 5TMR of 5TMR-LYT FD428_RS06635 PF06580 Histidine kinase FD428_RS06640 PF00155 Aminotransferase class I and II FD428_RS06650 PF03279 Bacterial lipid A biosynthesis acyltransferase FD428_RS06660 PF03797 Autotransporter beta-domain FD428_RS06670 PF00498 FHA domain FD428_RS06670 PF00563 EAL domain FD428_RS06670 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS06685 PF07969 Amidohydrolase family FD428_RS06700 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS06700 PF03466 LysR substrate binding domain FD428_RS06705 PF12833 Helix-turn-helix domain FD428_RS06710 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FD428_RS06710 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD428_RS06715 PF13426 PAS domain FD428_RS06715 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS06715 PF00563 EAL domain FD428_RS06720 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS06720 PF00072 Response regulator receiver domain FD428_RS06725 PF07995 Glucose / Sorbosone dehydrogenase FD428_RS06730 PF05977 Transmembrane secretion effector FD428_RS06740 PF01226 Formate/nitrite transporter FD428_RS06745 PF04333 MlaA lipoprotein FD428_RS06750 PF03349 Outer membrane protein transport protein (OMPP1/FadL/TodX) FD428_RS06755 PF04175 Protein of unknown function (DUF406) FD428_RS06760 PF00108 Thiolase, N-terminal domain FD428_RS06760 PF02803 Thiolase, C-terminal domain FD428_RS06765 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FD428_RS06765 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FD428_RS06765 PF00378 Enoyl-CoA hydratase/isomerase FD428_RS06770 PF00300 Histidine phosphatase superfamily (branch 1) FD428_RS06775 PF01713 Smr domain FD428_RS06780 PF05175 Methyltransferase small domain FD428_RS06785 PF01264 Chorismate synthase FD428_RS06790 PF03411 Penicillin-insensitive murein endopeptidase FD428_RS06795 PF01925 Sulfite exporter TauE/SafE FD428_RS06800 PF04315 Elongation factor P hydroxylase FD428_RS06805 PF08891 YfcL protein FD428_RS06810 PF01266 FAD dependent oxidoreductase FD428_RS06810 PF05430 S-adenosyl-L-methionine-dependent methyltransferase FD428_RS06815 PF02801 Beta-ketoacyl synthase, C-terminal domain FD428_RS06815 PF00109 Beta-ketoacyl synthase, N-terminal domain FD428_RS06840 PF07690 Major Facilitator Superfamily FD428_RS06850 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FD428_RS06850 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD428_RS06850 PF11890 Domain of unknown function (DUF3410) FD428_RS06855 PF02774 Semialdehyde dehydrogenase, dimerisation domain FD428_RS06855 PF01118 Semialdehyde dehydrogenase, NAD binding domain FD428_RS06860 PF01416 tRNA pseudouridine synthase FD428_RS06865 PF09335 SNARE associated Golgi protein FD428_RS06870 PF01039 Carboxyl transferase domain FD428_RS06870 PF17848 Acetyl-coA carboxylase zinc finger domain FD428_RS06875 PF02875 Mur ligase family, glutamate ligase domain FD428_RS06875 PF08245 Mur ligase middle domain FD428_RS06880 PF05036 Sporulation related domain FD428_RS06885 PF02674 Colicin V production protein FD428_RS06890 PF00156 Phosphoribosyl transferase domain FD428_RS06895 PF02441 Flavoprotein FD428_RS06900 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS06905 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS06910 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS06915 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS06920 PF00005 ABC transporter FD428_RS06925 PF13302 Acetyltransferase (GNAT) domain FD428_RS06930 PF08338 Domain of unknown function (DUF1731) FD428_RS06930 PF01370 NAD dependent epimerase/dehydratase family FD428_RS06935 PF02152 Dihydroneopterin aldolase FD428_RS06940 PF02798 Glutathione S-transferase, N-terminal domain FD428_RS06940 PF14834 Glutathione S-transferase, C-terminal domain FD428_RS06945 PF12850 Calcineurin-like phosphoesterase superfamily domain FD428_RS06950 PF00293 NUDIX domain FD428_RS06955 PF00356 Bacterial regulatory proteins, lacI family FD428_RS06960 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS06970 PF03611 PTS system sugar-specific permease component FD428_RS06975 PF00456 Transketolase, thiamine diphosphate binding domain FD428_RS06980 PF02779 Transketolase, pyrimidine binding domain FD428_RS06980 PF02780 Transketolase, C-terminal domain FD428_RS06985 PF03606 C4-dicarboxylate anaerobic carrier FD428_RS06990 PF01515 Phosphate acetyl/butaryl transferase FD428_RS06990 PF07085 DRTGG domain FD428_RS06995 PF00871 Acetokinase family FD428_RS07000 PF04217 Protein of unknown function, DUF412 FD428_RS07005 PF03887 YfbU domain FD428_RS07010 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS07015 PF03600 Citrate transporter FD428_RS07015 PF02080 TrkA-C domain FD428_RS07025 PF00155 Aminotransferase class I and II FD428_RS07030 PF03466 LysR substrate binding domain FD428_RS07030 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS07035 PF00507 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 FD428_RS07040 PF01058 NADH ubiquinone oxidoreductase, 20 Kd subunit FD428_RS07045 PF00346 Respiratory-chain NADH dehydrogenase, 49 Kd subunit FD428_RS07045 PF00329 Respiratory-chain NADH dehydrogenase, 30 Kd subunit FD428_RS07055 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FD428_RS07055 PF10531 SLBB domain FD428_RS07055 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region FD428_RS07060 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region FD428_RS07060 PF01568 Molydopterin dinucleotide binding domain FD428_RS07060 PF00384 Molybdopterin oxidoreductase FD428_RS07060 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD428_RS07065 PF00146 NADH dehydrogenase FD428_RS07070 PF12838 4Fe-4S dicluster domain FD428_RS07075 PF00499 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 FD428_RS07080 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L FD428_RS07085 PF00361 Proton-conducting membrane transporter FD428_RS07085 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus FD428_RS07090 PF00361 Proton-conducting membrane transporter FD428_RS07095 PF00361 Proton-conducting membrane transporter FD428_RS07100 PF00072 Response regulator receiver domain FD428_RS07100 PF01584 CheW-like domain FD428_RS07105 PF12706 Beta-lactamase superfamily domain FD428_RS07110 PF13673 Acetyltransferase (GNAT) domain FD428_RS07115 PF05957 Bacterial protein of unknown function (DUF883) FD428_RS07120 PF00425 chorismate binding enzyme FD428_RS07125 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS07125 PF16582 Middle domain of thiamine pyrophosphate FD428_RS07125 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS07130 PF12697 Alpha/beta hydrolase family FD428_RS07135 PF00378 Enoyl-CoA hydratase/isomerase FD428_RS07140 PF13378 Enolase C-terminal domain-like FD428_RS07145 PF13193 AMP-binding enzyme C-terminal domain FD428_RS07145 PF00501 AMP-binding enzyme FD428_RS07150 PF06628 Catalase-related immune-responsive FD428_RS07150 PF00199 Catalase FD428_RS07155 PF07437 YfaZ precursor FD428_RS07160 PF00994 Probable molybdopterin binding domain FD428_RS07165 PF02754 Cysteine-rich domain FD428_RS07165 PF13183 4Fe-4S dicluster domain FD428_RS07170 PF00890 FAD binding domain FD428_RS07175 PF01266 FAD dependent oxidoreductase FD428_RS07175 PF04324 BFD-like [2Fe-2S] binding domain FD428_RS07180 PF07690 Major Facilitator Superfamily FD428_RS07185 PF03009 Glycerophosphoryl diester phosphodiesterase family FD428_RS07190 PF00111 2Fe-2S iron-sulfur cluster binding domain FD428_RS07195 PF00268 Ribonucleotide reductase, small chain FD428_RS07200 PF02867 Ribonucleotide reductase, barrel domain FD428_RS07200 PF00317 Ribonucleotide reductase, all-alpha domain FD428_RS07200 PF03477 ATP cone domain FD428_RS07210 PF03989 DNA gyrase C-terminal domain, beta-propeller FD428_RS07210 PF00521 DNA gyrase/topoisomerase IV, subunit A FD428_RS07215 PF00108 Thiolase, N-terminal domain FD428_RS07215 PF02803 Thiolase, C-terminal domain FD428_RS07220 PF02667 Short chain fatty acid transporter FD428_RS07225 PF01144 Coenzyme A transferase FD428_RS07230 PF01144 Coenzyme A transferase FD428_RS07235 PF00158 Sigma-54 interaction domain FD428_RS07235 PF02954 Bacterial regulatory protein, Fis family FD428_RS07235 PF00072 Response regulator receiver domain FD428_RS07240 PF00989 PAS fold FD428_RS07240 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS07240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS07245 PF09456 RcsC Alpha-Beta-Loop (ABL) FD428_RS07245 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS07245 PF00072 Response regulator receiver domain FD428_RS07250 PF00072 Response regulator receiver domain FD428_RS07250 PF00196 Bacterial regulatory proteins, luxR family FD428_RS07255 PF16359 RcsD-ABL domain FD428_RS07255 PF01627 Hpt domain FD428_RS07255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS07260 PF00267 Gram-negative porin FD428_RS07270 PF02424 ApbE family FD428_RS07275 PF02805 Metal binding domain of Ada FD428_RS07275 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FD428_RS07275 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FD428_RS07275 PF12833 Helix-turn-helix domain FD428_RS07280 PF13532 2OG-Fe(II) oxygenase superfamily FD428_RS07285 PF00005 ABC transporter FD428_RS07290 PF00571 CBS domain FD428_RS07290 PF01769 Divalent cation transporter FD428_RS07290 PF03448 MgtE intracellular N domain FD428_RS07295 PF06039 Malate:quinone oxidoreductase (Mqo) FD428_RS07300 PF03974 Ecotin FD428_RS07305 PF13187 4Fe-4S dicluster domain FD428_RS07305 PF12800 4Fe-4S binding domain FD428_RS07305 PF00037 4Fe-4S binding domain FD428_RS07310 PF03927 NapD protein FD428_RS07315 PF00384 Molybdopterin oxidoreductase FD428_RS07315 PF01568 Molydopterin dinucleotide binding domain FD428_RS07315 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD428_RS07320 PF12800 4Fe-4S binding domain FD428_RS07320 PF12838 4Fe-4S dicluster domain FD428_RS07325 PF13237 4Fe-4S dicluster domain FD428_RS07325 PF12801 4Fe-4S binding domain FD428_RS07330 PF03892 Nitrate reductase cytochrome c-type subunit (NapB) FD428_RS07335 PF03264 NapC/NirT cytochrome c family, N-terminal region FD428_RS07340 PF00005 ABC transporter FD428_RS07345 PF03379 CcmB protein FD428_RS07350 PF01578 Cytochrome C assembly protein FD428_RS07355 PF04995 Heme exporter protein D (CcmD) FD428_RS07360 PF03100 CcmE FD428_RS07365 PF01578 Cytochrome C assembly protein FD428_RS07365 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FD428_RS07370 PF08534 Redoxin FD428_RS07375 PF03918 Cytochrome C biogenesis protein FD428_RS07380 PF00196 Bacterial regulatory proteins, luxR family FD428_RS07380 PF00072 Response regulator receiver domain FD428_RS07390 PF00884 Sulfatase FD428_RS07390 PF11893 Domain of unknown function (DUF3413) FD428_RS07395 PF07208 Protein of unknown function (DUF1414) FD428_RS07400 PF04245 37-kD nucleoid-associated bacterial protein FD428_RS07405 PF01386 Ribosomal L25p family FD428_RS07410 PF04851 Type III restriction enzyme, res subunit FD428_RS07410 PF00271 Helicase conserved C-terminal domain FD428_RS07415 PF01479 S4 domain FD428_RS07415 PF00849 RNA pseudouridylate synthase FD428_RS07420 PF07690 Major Facilitator Superfamily FD428_RS07430 PF13989 YejG-like protein FD428_RS07435 PF00005 ABC transporter FD428_RS07435 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS07440 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS07440 PF12911 N-terminal TM domain of oligopeptide transport permease C FD428_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS07450 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS07455 PF00563 EAL domain FD428_RS07455 PF12792 CSS motif domain associated with EAL FD428_RS07460 PF00877 NlpC/P60 family FD428_RS07465 PF01569 PAP2 superfamily FD428_RS07470 PF07683 Cobalamin synthesis protein cobW C-terminal domain FD428_RS07470 PF02492 CobW/HypB/UreG, nucleotide-binding domain FD428_RS07475 PF01232 Mannitol dehydrogenase Rossmann domain FD428_RS07475 PF08125 Mannitol dehydrogenase C-terminal domain FD428_RS07480 PF03786 D-mannonate dehydratase (UxuA) FD428_RS07485 PF09285 Elongation factor P, C-terminal FD428_RS07485 PF01132 Elongation factor P (EF-P) OB domain FD428_RS07485 PF08207 Elongation factor P (EF-P) KOW-like domain FD428_RS07490 PF03692 Putative zinc- or iron-chelating domain FD428_RS07495 PF07690 Major Facilitator Superfamily FD428_RS07500 PF00381 PTS HPr component phosphorylation site FD428_RS07500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS07505 PF00294 pfkB family carbohydrate kinase FD428_RS07510 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS07510 PF02378 Phosphotransferase system, EIIC FD428_RS07515 PF00294 pfkB family carbohydrate kinase FD428_RS07520 PF04227 Indigoidine synthase A like protein FD428_RS07525 PF01773 Na+ dependent nucleoside transporter N-terminus FD428_RS07525 PF07662 Na+ dependent nucleoside transporter C-terminus FD428_RS07530 PF00294 pfkB family carbohydrate kinase FD428_RS07535 PF01261 Xylose isomerase-like TIM barrel FD428_RS07540 PF03601 Conserved hypothetical protein 698 FD428_RS07545 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS07545 PF03466 LysR substrate binding domain FD428_RS07550 PF00324 Amino acid permease FD428_RS07555 PF07715 TonB-dependent Receptor Plug Domain FD428_RS07555 PF00593 TonB dependent receptor FD428_RS07560 PF07690 Major Facilitator Superfamily FD428_RS07565 PF18429 Domain of unknown function (DUF5609) FD428_RS07570 PF03313 Serine dehydratase alpha chain FD428_RS07570 PF03315 Serine dehydratase beta chain FD428_RS07580 PF00756 Putative esterase FD428_RS07585 PF01227 GTP cyclohydrolase I FD428_RS07590 PF04235 Protein of unknown function (DUF418) FD428_RS07595 PF00356 Bacterial regulatory proteins, lacI family FD428_RS07600 PF13407 Periplasmic binding protein domain FD428_RS07605 PF00005 ABC transporter FD428_RS07610 PF02653 Branched-chain amino acid transport system / permease component FD428_RS07615 PF10808 Protein of unknown function (DUF2542) FD428_RS07620 PF02698 DUF218 domain FD428_RS07625 PF08211 Cytidine and deoxycytidylate deaminase zinc-binding region FD428_RS07625 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FD428_RS07630 PF04172 LrgB-like family FD428_RS07635 PF03788 LrgA family FD428_RS07640 PF03466 LysR substrate binding domain FD428_RS07640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS07645 PF07690 Major Facilitator Superfamily FD428_RS07650 PF07883 Cupin domain FD428_RS07655 PF01557 Fumarylacetoacetate (FAA) hydrolase family FD428_RS07660 PF02798 Glutathione S-transferase, N-terminal domain FD428_RS07660 PF14497 Glutathione S-transferase, C-terminal domain FD428_RS07665 PF01494 FAD binding domain FD428_RS07670 PF01207 Dihydrouridine synthase (Dus) FD428_RS07675 PF02321 Outer membrane efflux protein FD428_RS07680 PF09335 SNARE associated Golgi protein FD428_RS07685 PF04893 Yip1 domain FD428_RS07690 PF00768 D-alanyl-D-alanine carboxypeptidase FD428_RS07695 PF01565 FAD binding domain FD428_RS07695 PF09330 D-lactate dehydrogenase, membrane binding FD428_RS07705 PF14310 Fibronectin type III-like domain FD428_RS07705 PF00933 Glycosyl hydrolase family 3 N terminal domain FD428_RS07705 PF01915 Glycosyl hydrolase family 3 C-terminal domain FD428_RS07710 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FD428_RS07715 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS07720 PF00005 ABC transporter FD428_RS07725 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS07735 PF13411 MerR HTH family regulatory protein FD428_RS07740 PF06580 Histidine kinase FD428_RS07740 PF07694 5TMR of 5TMR-LYT FD428_RS07745 PF00072 Response regulator receiver domain FD428_RS07745 PF04397 LytTr DNA-binding domain FD428_RS07750 PF07308 Protein of unknown function (DUF1456) FD428_RS07755 PF01588 Putative tRNA binding domain FD428_RS07755 PF09334 tRNA synthetases class I (M) FD428_RS07760 PF10609 NUBPL iron-transfer P-loop NTPase FD428_RS07765 PF10836 Protein of unknown function (DUF2574) FD428_RS07775 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS07775 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS07780 PF00577 Outer membrane usher protein FD428_RS07780 PF13953 PapC C-terminal domain FD428_RS07780 PF13954 PapC N-terminal domain FD428_RS07790 PF11776 Nickel/cobalt transporter regulator FD428_RS07795 PF02110 Hydroxyethylthiazole kinase family FD428_RS07800 PF08543 Phosphomethylpyrimidine kinase FD428_RS07805 PF00392 Bacterial regulatory proteins, gntR family FD428_RS07805 PF07702 UTRA domain FD428_RS07810 PF00294 pfkB family carbohydrate kinase FD428_RS07815 PF03747 ADP-ribosylglycohydrolase FD428_RS07820 PF03825 Nucleoside H+ symporter FD428_RS07825 PF01791 DeoC/LacD family aldolase FD428_RS07830 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS07830 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS07835 PF00106 short chain dehydrogenase FD428_RS07840 PF00356 Bacterial regulatory proteins, lacI family FD428_RS07845 PF04198 Putative sugar-binding domain FD428_RS07850 PF08125 Mannitol dehydrogenase C-terminal domain FD428_RS07850 PF01232 Mannitol dehydrogenase Rossmann domain FD428_RS07855 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS07855 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS07860 PF07690 Major Facilitator Superfamily FD428_RS07865 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS07870 PF00781 Diacylglycerol kinase catalytic domain FD428_RS07875 PF01136 Peptidase family U32 FD428_RS07875 PF16325 Peptidase family U32 C-terminal domain FD428_RS07880 PF00486 Transcriptional regulatory protein, C terminal FD428_RS07880 PF00072 Response regulator receiver domain FD428_RS07885 PF00672 HAMP domain FD428_RS07885 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS07885 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS07890 PF07690 Major Facilitator Superfamily FD428_RS07895 PF00873 AcrB/AcrD/AcrF family FD428_RS07900 PF00873 AcrB/AcrD/AcrF family FD428_RS07905 PF13533 Biotin-lipoyl like FD428_RS07915 PF00012 Hsp70 protein FD428_RS07920 PF00730 HhH-GPD superfamily base excision DNA repair protein FD428_RS07920 PF06029 AlkA N-terminal domain FD428_RS07925 PF00563 EAL domain FD428_RS07925 PF08448 PAS fold FD428_RS07925 PF13426 PAS domain FD428_RS07925 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS07925 PF05231 MASE1 FD428_RS07925 PF08447 PAS fold FD428_RS07930 PF00485 Phosphoribulokinase / Uridine kinase family FD428_RS07935 PF06559 2'-deoxycytidine 5'-triphosphate deaminase (DCD) FD428_RS07940 PF05170 AsmA family FD428_RS07945 PF00571 CBS domain FD428_RS07945 PF03471 Transporter associated domain FD428_RS07945 PF03741 Integral membrane protein TerC family FD428_RS07950 PF02563 Polysaccharide biosynthesis/export protein FD428_RS07950 PF10531 SLBB domain FD428_RS07950 PF18412 Outer-membrane lipoprotein Wza C-terminal domain FD428_RS07955 PF01451 Low molecular weight phosphotyrosine protein phosphatase FD428_RS07960 PF13614 AAA domain FD428_RS07960 PF02706 Chain length determinant protein FD428_RS07960 PF13807 G-rich domain on putative tyrosine kinase FD428_RS07965 PF00535 Glycosyl transferase family 2 FD428_RS07970 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS07975 PF13439 Glycosyltransferase Family 4 FD428_RS07975 PF00534 Glycosyl transferases group 1 FD428_RS07985 PF00535 Glycosyl transferase family 2 FD428_RS07990 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS07995 PF16363 GDP-mannose 4,6 dehydratase FD428_RS08000 PF01370 NAD dependent epimerase/dehydratase family FD428_RS08005 PF00293 NUDIX domain FD428_RS08010 PF13579 Glycosyl transferase 4-like domain FD428_RS08010 PF00534 Glycosyl transferases group 1 FD428_RS08015 PF00483 Nucleotidyl transferase FD428_RS08015 PF01050 Mannose-6-phosphate isomerase FD428_RS08020 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FD428_RS08020 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FD428_RS08020 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FD428_RS08020 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FD428_RS08025 PF02397 Bacterial sugar transferase FD428_RS08035 PF04230 Polysaccharide pyruvyl transferase FD428_RS08040 PF00534 Glycosyl transferases group 1 FD428_RS08040 PF13439 Glycosyltransferase Family 4 FD428_RS08050 PF00483 Nucleotidyl transferase FD428_RS08080 PF03275 UDP-galactopyranose mutase FD428_RS08085 PF02397 Bacterial sugar transferase FD428_RS08090 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FD428_RS08090 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain FD428_RS08095 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FD428_RS08095 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FD428_RS08095 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FD428_RS08100 PF02706 Chain length determinant protein FD428_RS08105 PF01502 Phosphoribosyl-AMP cyclohydrolase FD428_RS08105 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase FD428_RS08110 PF00977 Histidine biosynthesis protein FD428_RS08115 PF00977 Histidine biosynthesis protein FD428_RS08120 PF00117 Glutamine amidotransferase class-I FD428_RS08125 PF00475 Imidazoleglycerol-phosphate dehydratase FD428_RS08130 PF00155 Aminotransferase class I and II FD428_RS08135 PF00815 Histidinol dehydrogenase FD428_RS08140 PF01634 ATP phosphoribosyltransferase FD428_RS08140 PF08029 HisG, C-terminal domain FD428_RS08150 PF01370 NAD dependent epimerase/dehydratase family FD428_RS08155 PF03466 LysR substrate binding domain FD428_RS08155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS08165 PF13520 Amino acid permease FD428_RS08170 PF08411 Exonuclease C-terminal FD428_RS08170 PF00929 Exonuclease FD428_RS08175 PF07943 Penicillin-binding protein 5, C-terminal domain FD428_RS08175 PF00768 D-alanyl-D-alanine carboxypeptidase FD428_RS08180 PF06445 GyrI-like small molecule binding domain FD428_RS08185 PF04632 Fusaric acid resistance protein family FD428_RS08190 PF04363 Protein of unknown function (DUF496) FD428_RS08195 PF00288 GHMP kinases N terminal domain FD428_RS08200 PF00871 Acetokinase family FD428_RS08205 PF10662 Ethanolamine utilisation - propanediol utilisation FD428_RS08210 PF00936 BMC domain FD428_RS08220 PF13375 RnfC Barrel sandwich hybrid domain FD428_RS08220 PF10531 SLBB domain FD428_RS08220 PF13237 4Fe-4S dicluster domain FD428_RS08220 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FD428_RS08225 PF00171 Aldehyde dehydrogenase family FD428_RS08225 PF00465 Iron-containing alcohol dehydrogenase FD428_RS08230 PF00171 Aldehyde dehydrogenase family FD428_RS08235 PF01923 Cobalamin adenosyltransferase FD428_RS08240 PF03319 Ethanolamine utilisation protein EutN/carboxysome FD428_RS08250 PF06130 Phosphate propanoyltransferase FD428_RS08260 PF00936 BMC domain FD428_RS08270 PF18427 DD-reactivating factor swiveling domain FD428_RS08270 PF08841 Diol dehydratase reactivase ATPase-like domain FD428_RS08275 PF02287 Dehydratase small subunit FD428_RS08280 PF02288 Dehydratase medium subunit FD428_RS08285 PF02286 Dehydratase large subunit FD428_RS08290 PF00936 BMC domain FD428_RS08295 PF00936 BMC domain FD428_RS08300 PF00230 Major intrinsic protein FD428_RS08305 PF10114 Sensory domain found in PocR FD428_RS08305 PF12833 Helix-turn-helix domain FD428_RS08310 PF07685 CobB/CobQ-like glutamine amidotransferase domain FD428_RS08310 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FD428_RS08315 PF03186 CobD/Cbib protein FD428_RS08320 PF02570 Precorrin-8X methylmutase FD428_RS08325 PF01888 CbiD FD428_RS08330 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD428_RS08335 PF05175 Methyltransferase small domain FD428_RS08340 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD428_RS08345 PF11761 Cobalamin biosynthesis central region FD428_RS08345 PF01890 Cobalamin synthesis G C-terminus FD428_RS08345 PF11760 Cobalamin synthesis G N-terminal FD428_RS08350 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD428_RS08355 PF02571 Precorrin-6x reductase CbiJ/CobK FD428_RS08360 PF06180 Cobalt chelatase (CbiK) FD428_RS08365 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases FD428_RS08370 PF01891 Cobalt uptake substrate-specific transmembrane region FD428_RS08375 PF02553 Cobalt transport protein component CbiN FD428_RS08380 PF02361 Cobalt transport protein FD428_RS08385 PF00005 ABC transporter FD428_RS08390 PF07685 CobB/CobQ-like glutamine amidotransferase domain FD428_RS08395 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase FD428_RS08400 PF02654 Cobalamin-5-phosphate synthase FD428_RS08405 PF02277 Phosphoribosyltransferase FD428_RS08410 PF03734 L,D-transpeptidase catalytic domain FD428_RS08410 PF17969 L,D-transpeptidase C-terminal domain FD428_RS08415 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS08415 PF03466 LysR substrate binding domain FD428_RS08445 PF04107 Glutamate-cysteine ligase family 2(GCS2) FD428_RS08455 PF01032 FecCD transport family FD428_RS08460 PF13649 Methyltransferase domain FD428_RS08480 PF01554 MatE FD428_RS08490 PF09831 Uncharacterized protein conserved in bacteria (DUF2058) FD428_RS08500 PF00005 ABC transporter FD428_RS08505 PF01638 HxlR-like helix-turn-helix FD428_RS08530 PF00583 Acetyltransferase (GNAT) family FD428_RS08535 PF02677 Epoxyqueuosine reductase QueH FD428_RS08540 PF01321 Creatinase/Prolidase N-terminal domain FD428_RS08540 PF00557 Metallopeptidase family M24 FD428_RS08545 PF10423 Bacterial AMP nucleoside phosphorylase N-terminus FD428_RS08545 PF01048 Phosphorylase superfamily FD428_RS08550 PF07690 Major Facilitator Superfamily FD428_RS08550 PF00083 Sugar (and other) transporter FD428_RS08555 PF00005 ABC transporter FD428_RS08565 PF01032 FecCD transport family FD428_RS08575 PF03466 LysR substrate binding domain FD428_RS08575 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS08580 PF03466 LysR substrate binding domain FD428_RS08580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS08590 PF06167 Glucose-regulated metallo-peptidase M90 FD428_RS08600 PF00419 Fimbrial protein FD428_RS08605 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS08605 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS08610 PF00577 Outer membrane usher protein FD428_RS08610 PF13954 PapC N-terminal domain FD428_RS08610 PF13953 PapC C-terminal domain FD428_RS08615 PF00419 Fimbrial protein FD428_RS08640 PF00593 TonB dependent receptor FD428_RS08640 PF07715 TonB-dependent Receptor Plug Domain FD428_RS08645 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) FD428_RS08650 PF04183 IucA / IucC family FD428_RS08650 PF06276 Ferric iron reductase FhuF-like transporter FD428_RS08660 PF06276 Ferric iron reductase FhuF-like transporter FD428_RS08660 PF04183 IucA / IucC family FD428_RS08675 PF00267 Gram-negative porin FD428_RS08680 PF01966 HD domain FD428_RS08685 PF18284 DNA methylase N-terminal domain FD428_RS08685 PF00145 C-5 cytosine-specific DNA methylase FD428_RS08690 PF03852 DNA mismatch endonuclease Vsr FD428_RS08695 PF00892 EamA-like transporter family FD428_RS08700 PF05661 Protein of unknown function (DUF808) FD428_RS08705 PF09926 Uncharacterized small protein (DUF2158) FD428_RS08710 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS08710 PF17151 Periplasmic sensor domain FD428_RS08715 PF10733 Protein of unknown function (DUF2525) FD428_RS08720 PF10781 Dextransucrase DSRB FD428_RS08725 PF00196 Bacterial regulatory proteins, luxR family FD428_RS08730 PF01311 Bacterial export proteins, family 1 FD428_RS08735 PF01313 Bacterial export proteins, family 3 FD428_RS08740 PF00813 FliP family FD428_RS08745 PF04347 Flagellar biosynthesis protein, FliO FD428_RS08750 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FD428_RS08750 PF16973 Flagellar motor switch protein FliN N-terminal FD428_RS08755 PF02154 Flagellar motor switch protein FliM FD428_RS08755 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FD428_RS08760 PF03748 Flagellar basal body-associated protein FliL FD428_RS08765 PF02120 Flagellar hook-length control protein FliK FD428_RS08770 PF02050 Flagellar FliJ protein FD428_RS08775 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD428_RS08775 PF18269 T3SS EscN ATPase C-terminal domain FD428_RS08780 PF02108 Flagellar assembly protein FliH FD428_RS08785 PF14842 FliG N-terminal domain FD428_RS08785 PF14841 FliG middle domain FD428_RS08785 PF01706 FliG C-terminal domain FD428_RS08790 PF01514 Secretory protein of YscJ/FliF family FD428_RS08790 PF08345 Flagellar M-ring protein C-terminal FD428_RS08795 PF02049 Flagellar hook-basal body complex protein FliE FD428_RS08800 PF01206 Sulfurtransferase TusA FD428_RS08805 PF04143 Sulphur transport FD428_RS08810 PF13987 YedD-like protein FD428_RS08815 PF00128 Alpha amylase, catalytic domain FD428_RS08815 PF02806 Alpha amylase, C-terminal all-beta domain FD428_RS08820 PF05400 Flagellar protein FliT FD428_RS08825 PF02561 Flagellar protein FliS FD428_RS08835 PF00700 Bacterial flagellin C-terminal helical region FD428_RS08835 PF00669 Bacterial flagellin N-terminal helical region FD428_RS08840 PF10119 Predicted methyltransferase regulatory domain FD428_RS08840 PF13847 Methyltransferase domain FD428_RS08860 PF08889 WbqC-like protein family FD428_RS08865 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FD428_RS08870 PF04545 Sigma-70, region 4 FD428_RS08870 PF04539 Sigma-70 region 3 FD428_RS08870 PF04542 Sigma-70 region 2 FD428_RS08875 PF02899 Phage integrase, N-terminal SAM-like domain FD428_RS08880 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS08885 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS08890 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS08895 PF00005 ABC transporter FD428_RS08900 PF00196 Bacterial regulatory proteins, luxR family FD428_RS08900 PF03472 Autoinducer binding domain FD428_RS08905 PF10769 Protein of unknown function (DUF2594) FD428_RS08910 PF00072 Response regulator receiver domain FD428_RS08910 PF00196 Bacterial regulatory proteins, luxR family FD428_RS08915 PF08459 UvrC Helix-hairpin-helix N-terminal FD428_RS08915 PF02151 UvrB/uvrC motif FD428_RS08915 PF01541 GIY-YIG catalytic domain FD428_RS08920 PF01066 CDP-alcohol phosphatidyltransferase FD428_RS08940 PF02810 SEC-C motif FD428_RS08940 PF03695 Uncharacterised protein family (UPF0149) FD428_RS08945 PF03222 Tryptophan/tyrosine permease family FD428_RS08950 PF10678 Protein of unknown function (DUF2492) FD428_RS08955 PF00210 Ferritin-like domain FD428_RS08960 PF13992 YecR-like lipoprotein FD428_RS08970 PF10964 Protein of unknown function (DUF2766) FD428_RS08975 PF00210 Ferritin-like domain FD428_RS08985 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FD428_RS08990 PF00005 ABC transporter FD428_RS08995 PF02653 Branched-chain amino acid transport system / permease component FD428_RS09000 PF02358 Trehalose-phosphatase FD428_RS09005 PF00982 Glycosyltransferase family 20 FD428_RS09010 PF00582 Universal stress protein family FD428_RS09020 PF05247 Flagellar transcriptional activator (FlhD) FD428_RS09025 PF05280 Flagellar transcriptional activator (FlhC) FD428_RS09030 PF01618 MotA/TolQ/ExbB proton channel family FD428_RS09035 PF13677 Membrane MotB of proton-channel complex MotA/MotB FD428_RS09035 PF00691 OmpA family FD428_RS09040 PF09078 CheY binding FD428_RS09040 PF01584 CheW-like domain FD428_RS09040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS09040 PF02895 Signal transducing histidine kinase, homodimeric domain FD428_RS09040 PF01627 Hpt domain FD428_RS09045 PF01584 CheW-like domain FD428_RS09050 PF00375 Sodium:dicarboxylate symporter family FD428_RS09055 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS09055 PF02203 Tar ligand binding domain homologue FD428_RS09055 PF00672 HAMP domain FD428_RS09060 PF02203 Tar ligand binding domain homologue FD428_RS09060 PF00672 HAMP domain FD428_RS09060 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS09065 PF03705 CheR methyltransferase, all-alpha domain FD428_RS09065 PF01739 CheR methyltransferase, SAM binding domain FD428_RS09070 PF01339 CheB methylesterase FD428_RS09070 PF00072 Response regulator receiver domain FD428_RS09075 PF00072 Response regulator receiver domain FD428_RS09080 PF04344 Chemotaxis phosphatase, CheZ FD428_RS09085 PF00419 Fimbrial protein FD428_RS09090 PF13953 PapC C-terminal domain FD428_RS09090 PF13954 PapC N-terminal domain FD428_RS09090 PF00577 Outer membrane usher protein FD428_RS09095 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS09095 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS09100 PF00419 Fimbrial protein FD428_RS09105 PF01312 FlhB HrpN YscU SpaS Family FD428_RS09110 PF00771 FHIPEP family FD428_RS09115 PF06366 Flagellar protein FlhE FD428_RS09125 PF07470 Glycosyl Hydrolase Family 88 FD428_RS09130 PF03717 Penicillin-binding Protein dimerisation domain FD428_RS09130 PF00905 Penicillin binding protein transpeptidase domain FD428_RS09135 PF05746 DALR anticodon binding domain FD428_RS09135 PF03485 Arginyl tRNA synthetase N terminal domain FD428_RS09135 PF00750 tRNA synthetases class I (R) FD428_RS09140 PF06185 YecM protein FD428_RS09145 PF03932 CutC family FD428_RS09150 PF08003 Protein of unknown function (DUF1698) FD428_RS09155 PF13649 Methyltransferase domain FD428_RS09160 PF01124 MAPEG family FD428_RS09165 PF01904 Protein of unknown function DUF72 FD428_RS09170 PF00857 Isochorismatase family FD428_RS09175 PF02938 GAD domain FD428_RS09175 PF00152 tRNA synthetases class II (D, K and N) FD428_RS09175 PF01336 OB-fold nucleic acid binding domain FD428_RS09180 PF00293 NUDIX domain FD428_RS09185 PF01709 Transcriptional regulator FD428_RS09190 PF02075 Crossover junction endodeoxyribonuclease RuvC FD428_RS09195 PF07499 RuvA, C-terminal domain FD428_RS09195 PF01330 RuvA N terminal domain FD428_RS09200 PF05491 RuvB C-terminal winged helix domain FD428_RS09200 PF05496 Holliday junction DNA helicase RuvB P-loop domain FD428_RS09200 PF17864 RuvB AAA lid domain FD428_RS09210 PF00950 ABC 3 transport family FD428_RS09215 PF00005 ABC transporter FD428_RS09220 PF01297 Zinc-uptake complex component A periplasmic FD428_RS09225 PF08525 Opacity-associated protein A N-terminal motif FD428_RS09225 PF01551 Peptidase family M23 FD428_RS09225 PF01476 LysM domain FD428_RS09230 PF03279 Bacterial lipid A biosynthesis acyltransferase FD428_RS09235 PF02887 Pyruvate kinase, alpha/beta domain FD428_RS09235 PF00224 Pyruvate kinase, barrel domain FD428_RS09240 PF01380 SIS domain FD428_RS09240 PF01418 Helix-turn-helix domain, rpiR family FD428_RS09245 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain FD428_RS09245 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain FD428_RS09250 PF00920 Dehydratase family FD428_RS09255 PF01081 KDPG and KHG aldolase FD428_RS09260 PF02222 ATP-grasp domain FD428_RS09265 PF07130 YebG protein FD428_RS09270 PF13995 YebF-like protein FD428_RS09275 PF04391 Protein of unknown function (DUF533) FD428_RS09285 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain FD428_RS09285 PF00326 Prolyl oligopeptidase family FD428_RS09290 PF00929 Exonuclease FD428_RS09295 PF00795 Carbon-nitrogen hydrolase FD428_RS09300 PF06440 DNA polymerase III, theta subunit FD428_RS09305 PF04234 CopC domain FD428_RS09310 PF05425 Copper resistance protein D FD428_RS09315 PF10709 Protein of unknown function (DUF2511) FD428_RS09325 PF07715 TonB-dependent Receptor Plug Domain FD428_RS09325 PF00593 TonB dependent receptor FD428_RS09330 PF00149 Calcineurin-like phosphoesterase FD428_RS09335 PF07358 Protein of unknown function (DUF1482) FD428_RS09340 PF07351 Protein of unknown function (DUF1480) FD428_RS09345 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF FD428_RS09345 PF13636 RNA-binding PUA-like domain of methyltransferase RsmF FD428_RS09345 PF01189 16S rRNA methyltransferase RsmB/F FD428_RS09350 PF02470 MlaD protein FD428_RS09355 PF04403 Paraquat-inducible protein A FD428_RS09360 PF13185 GAF domain FD428_RS09365 PF17516 ProQ C-terminal domain FD428_RS09365 PF04352 ProQ/FINO family FD428_RS09370 PF00595 PDZ domain FD428_RS09370 PF11818 C-terminal domain of tail specific protease (DUF3340) FD428_RS09370 PF17804 Tail specific protease N-terminal domain FD428_RS09370 PF03572 Peptidase family S41 FD428_RS09375 PF01435 Peptidase family M48 FD428_RS09380 PF07690 Major Facilitator Superfamily FD428_RS09385 PF01614 Bacterial transcriptional regulator FD428_RS09385 PF09339 IclR helix-turn-helix domain FD428_RS09390 PF13996 YobH-like protein FD428_RS09395 PF13998 MgrB protein FD428_RS09400 PF13974 YebO-like protein FD428_RS09405 PF10736 Protein of unknown function (DUF2627) FD428_RS09410 PF00313 'Cold-shock' DNA-binding domain FD428_RS09415 PF00905 Penicillin binding protein transpeptidase domain FD428_RS09415 PF03717 Penicillin-binding Protein dimerisation domain FD428_RS09420 PF13847 Methyltransferase domain FD428_RS09425 PF02659 Putative manganese efflux pump FD428_RS09430 PF06173 Protein of unknown function (DUF986) FD428_RS09435 PF03613 PTS system mannose/fructose/sorbose family IID component FD428_RS09440 PF03609 PTS system sorbose-specific iic component FD428_RS09445 PF03610 PTS system fructose IIA component FD428_RS09445 PF03830 PTS system sorbose subfamily IIB component FD428_RS09450 PF03741 Integral membrane protein TerC family FD428_RS09450 PF03471 Transporter associated domain FD428_RS09455 PF12792 CSS motif domain associated with EAL FD428_RS09455 PF00563 EAL domain FD428_RS09460 PF03315 Serine dehydratase beta chain FD428_RS09460 PF03313 Serine dehydratase alpha chain FD428_RS09465 PF00293 NUDIX domain FD428_RS09470 PF04715 Anthranilate synthase component I, N terminal region FD428_RS09470 PF00425 chorismate binding enzyme FD428_RS09475 PF03701 Uncharacterised protein family (UPF0181) FD428_RS09480 PF01042 Endoribonuclease L-PSP FD428_RS09485 PF13307 Helicase C-terminal domain FD428_RS09485 PF04851 Type III restriction enzyme, res subunit FD428_RS09490 PF00814 Glycoprotease family FD428_RS09495 PF03843 Outer membrane lipoprotein Slp family FD428_RS09500 PF13193 AMP-binding enzyme C-terminal domain FD428_RS09500 PF00501 AMP-binding enzyme FD428_RS09505 PF00570 HRDC domain FD428_RS09505 PF01612 3'-5' exonuclease FD428_RS09510 PF00180 Isocitrate/isopropylmalate dehydrogenase FD428_RS09515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS09515 PF03466 LysR substrate binding domain FD428_RS09520 PF03776 Septum formation topological specificity factor MinE FD428_RS09525 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain FD428_RS09530 PF03775 Septum formation inhibitor MinC, C-terminal domain FD428_RS09530 PF05209 Septum formation inhibitor MinC, N-terminal domain FD428_RS09535 PF05166 YcgL domain FD428_RS09540 PF01557 Fumarylacetoacetate (FAA) hydrolase family FD428_RS09545 PF03692 Putative zinc- or iron-chelating domain FD428_RS09555 PF02600 Disulfide bond formation protein DsbB FD428_RS09560 PF06450 Bacterial Na+/H+ antiporter B (NhaB) FD428_RS09565 PF07840 FadR C-terminal domain FD428_RS09565 PF00392 Bacterial regulatory proteins, gntR family FD428_RS09570 PF04293 SpoVR like protein FD428_RS09575 PF01266 FAD dependent oxidoreductase FD428_RS09580 PF01168 Alanine racemase, N-terminal domain FD428_RS09580 PF00842 Alanine racemase, C-terminal domain FD428_RS09585 PF03471 Transporter associated domain FD428_RS09585 PF00999 Sodium/hydrogen exchanger family FD428_RS09585 PF02080 TrkA-C domain FD428_RS09590 PF17676 LD-carboxypeptidase C-terminal domain FD428_RS09590 PF02016 LD-carboxypeptidase N-terminal domain FD428_RS09595 PF01464 Transglycosylase SLT domain FD428_RS09600 PF07317 Flagellar regulator YcgR FD428_RS09600 PF07238 PilZ domain FD428_RS09605 PF04226 Transglycosylase associated protein FD428_RS09610 PF07715 TonB-dependent Receptor Plug Domain FD428_RS09610 PF00593 TonB dependent receptor FD428_RS09620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FD428_RS09620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FD428_RS09630 PF00005 ABC transporter FD428_RS09635 PF01032 FecCD transport family FD428_RS09640 PF01497 Periplasmic binding protein FD428_RS09645 PF01204 Trehalase FD428_RS09650 PF00381 PTS HPr component phosphorylation site FD428_RS09650 PF03610 PTS system fructose IIA component FD428_RS09650 PF05524 PEP-utilising enzyme, N-terminal FD428_RS09650 PF00391 PEP-utilising enzyme, mobile domain FD428_RS09655 PF02734 DAK2 domain FD428_RS09660 PF02733 Dak1 domain FD428_RS09665 PF15977 Winged helix-turn-helix DNA binding FD428_RS09680 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS09680 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS09685 PF13954 PapC N-terminal domain FD428_RS09685 PF00577 Outer membrane usher protein FD428_RS09685 PF13953 PapC C-terminal domain FD428_RS09695 PF00419 Fimbrial protein FD428_RS09705 PF03466 LysR substrate binding domain FD428_RS09705 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS09710 PF00384 Molybdopterin oxidoreductase FD428_RS09715 PF01654 Cytochrome bd terminal oxidase subunit I FD428_RS09720 PF02322 Cytochrome bd terminal oxidase subunit II FD428_RS09730 PF04055 Radical SAM superfamily FD428_RS09730 PF06463 Molybdenum Cofactor Synthesis C FD428_RS09735 PF01062 Bestrophin, RFP-TM, chloride channel FD428_RS09755 PF02567 Phenazine biosynthesis-like protein FD428_RS09760 PF00356 Bacterial regulatory proteins, lacI family FD428_RS09770 PF00171 Aldehyde dehydrogenase family FD428_RS09775 PF00107 Zinc-binding dehydrogenase FD428_RS09775 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS09785 PF07715 TonB-dependent Receptor Plug Domain FD428_RS09785 PF00593 TonB dependent receptor FD428_RS09790 PF13193 AMP-binding enzyme C-terminal domain FD428_RS09790 PF00501 AMP-binding enzyme FD428_RS09795 PF00975 Thioesterase domain FD428_RS09805 PF00550 Phosphopantetheine attachment site FD428_RS09805 PF00668 Condensation domain FD428_RS09805 PF16197 Ketoacyl-synthetase C-terminal extension FD428_RS09805 PF00698 Acyl transferase domain FD428_RS09805 PF02801 Beta-ketoacyl synthase, C-terminal domain FD428_RS09805 PF00109 Beta-ketoacyl synthase, N-terminal domain FD428_RS09810 PF00501 AMP-binding enzyme FD428_RS09810 PF08242 Methyltransferase domain FD428_RS09810 PF00550 Phosphopantetheine attachment site FD428_RS09810 PF00668 Condensation domain FD428_RS09820 PF00664 ABC transporter transmembrane region FD428_RS09820 PF04954 Siderophore-interacting protein FD428_RS09820 PF08021 Siderophore-interacting FAD-binding domain FD428_RS09820 PF00005 ABC transporter FD428_RS09825 PF00005 ABC transporter FD428_RS09825 PF00664 ABC transporter transmembrane region FD428_RS09830 PF07690 Major Facilitator Superfamily FD428_RS09835 PF00425 chorismate binding enzyme FD428_RS09850 PF00145 C-5 cytosine-specific DNA methylase FD428_RS09855 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS09855 PF00672 HAMP domain FD428_RS09855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS09855 PF13755 Sensor N-terminal transmembrane domain FD428_RS09855 PF13756 Stimulus-sensing domain FD428_RS09880 PF13693 Winged helix-turn-helix DNA-binding FD428_RS09900 PF04002 RadC-like JAB domain FD428_RS09905 PF00589 Phage integrase family FD428_RS09905 PF02899 Phage integrase, N-terminal SAM-like domain FD428_RS09940 PF01541 GIY-YIG catalytic domain FD428_RS09940 PF08459 UvrC Helix-hairpin-helix N-terminal FD428_RS09950 PF13356 Arm DNA-binding domain FD428_RS09950 PF00589 Phage integrase family FD428_RS09955 PF06071 Protein of unknown function (DUF933) FD428_RS09955 PF01926 50S ribosome-binding GTPase FD428_RS09960 PF01195 Peptidyl-tRNA hydrolase FD428_RS09965 PF10762 Protein of unknown function (DUF2583) FD428_RS09970 PF02167 Cytochrome C1 family FD428_RS09975 PF00033 Cytochrome b/b6/petB FD428_RS09975 PF00032 Cytochrome b(C-terminal)/b6/petD FD428_RS09980 PF10399 Ubiquitinol-cytochrome C reductase Fe-S subunit TAT signal FD428_RS09980 PF00355 Rieske [2Fe-2S] domain FD428_RS09985 PF00127 Copper binding proteins, plastocyanin/azurin family FD428_RS09990 PF00005 ABC transporter FD428_RS09995 PF01032 FecCD transport family FD428_RS10010 PF01740 STAS domain FD428_RS10010 PF00916 Sulfate permease family FD428_RS10015 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase FD428_RS10015 PF14572 Phosphoribosyl synthetase-associated domain FD428_RS10020 PF00288 GHMP kinases N terminal domain FD428_RS10020 PF08544 GHMP kinases C terminal FD428_RS10025 PF03550 Outer membrane lipoprotein LolB FD428_RS10030 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain FD428_RS10030 PF01488 Shikimate / quinate 5-dehydrogenase FD428_RS10030 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain FD428_RS10035 PF03462 PCRF domain FD428_RS10035 PF00472 RF-1 domain FD428_RS10040 PF17827 PrmC N-terminal domain FD428_RS10040 PF13847 Methyltransferase domain FD428_RS10045 PF04247 Invasion gene expression up-regulator, SirB FD428_RS10050 PF13369 Transglutaminase-like superfamily FD428_RS10055 PF00793 DAHP synthetase I family FD428_RS10060 PF01699 Sodium/calcium exchanger protein FD428_RS10065 PF06150 ChaB FD428_RS10070 PF04752 ChaC-like protein FD428_RS10080 PF02203 Tar ligand binding domain homologue FD428_RS10080 PF00672 HAMP domain FD428_RS10080 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS10085 PF02635 DsrE/DsrF-like family FD428_RS10090 PF08376 Nitrate and nitrite sensing FD428_RS10090 PF03861 ANTAR domain FD428_RS10100 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10105 PF00005 ABC transporter FD428_RS10110 PF13806 Rieske-like [2Fe-2S] domain FD428_RS10110 PF18267 Rubredoxin NAD+ reductase C-terminal domain FD428_RS10110 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS10110 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain FD428_RS10110 PF01077 Nitrite and sulphite reductase 4Fe-4S domain FD428_RS10110 PF04324 BFD-like [2Fe-2S] binding domain FD428_RS10115 PF00384 Molybdopterin oxidoreductase FD428_RS10115 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD428_RS10115 PF01568 Molydopterin dinucleotide binding domain FD428_RS10115 PF04324 BFD-like [2Fe-2S] binding domain FD428_RS10120 PF11924 Inverse autotransporter, beta-domain FD428_RS10125 PF00072 Response regulator receiver domain FD428_RS10125 PF00196 Bacterial regulatory proteins, luxR family FD428_RS10130 PF07730 Histidine kinase FD428_RS10130 PF13675 Type IV pili methyl-accepting chemotaxis transducer N-term FD428_RS10130 PF00672 HAMP domain FD428_RS10130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS10135 PF07690 Major Facilitator Superfamily FD428_RS10140 PF00384 Molybdopterin oxidoreductase FD428_RS10140 PF01568 Molydopterin dinucleotide binding domain FD428_RS10140 PF14710 Respiratory nitrate reductase alpha N-terminal FD428_RS10145 PF14711 Respiratory nitrate reductase beta C-terminal FD428_RS10145 PF13247 4Fe-4S dicluster domain FD428_RS10150 PF02613 Nitrate reductase delta subunit FD428_RS10155 PF02665 Nitrate reductase gamma subunit FD428_RS10175 PF01842 ACT domain FD428_RS10175 PF00551 Formyl transferase FD428_RS10180 PF02810 SEC-C motif FD428_RS10185 PF01734 Patatin-like phospholipase FD428_RS10190 PF00072 Response regulator receiver domain FD428_RS10195 PF00483 Nucleotidyl transferase FD428_RS10200 PF00816 H-NS histone family FD428_RS10205 PF00265 Thymidine kinase FD428_RS10210 PF00465 Iron-containing alcohol dehydrogenase FD428_RS10210 PF00171 Aldehyde dehydrogenase family FD428_RS10215 PF01914 MarC family integral membrane protein FD428_RS10220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS10225 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10230 PF12911 N-terminal TM domain of oligopeptide transport permease C FD428_RS10230 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10235 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS10235 PF00005 ABC transporter FD428_RS10240 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS10240 PF00005 ABC transporter FD428_RS10245 PF04269 Protein of unknown function, DUF440 FD428_RS10250 PF13091 PLD-like domain FD428_RS10250 PF13396 Phospholipase_D-nuclease N-terminal FD428_RS10260 PF03795 YCII-related domain FD428_RS10265 PF03544 Gram-negative bacterial TonB protein C-terminal FD428_RS10270 PF03061 Thioesterase superfamily FD428_RS10275 PF04279 Intracellular septation protein A FD428_RS10285 PF03922 OmpW family FD428_RS10295 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS10300 PF00290 Tryptophan synthase alpha chain FD428_RS10305 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS10310 PF00697 N-(5'phosphoribosyl)anthranilate (PRA) isomerase FD428_RS10310 PF00218 Indole-3-glycerol phosphate synthase FD428_RS10315 PF00591 Glycosyl transferase family, a/b domain FD428_RS10315 PF02885 Glycosyl transferase family, helical bundle domain FD428_RS10315 PF00117 Glutamine amidotransferase class-I FD428_RS10320 PF04715 Anthranilate synthase component I, N terminal region FD428_RS10320 PF00425 chorismate binding enzyme FD428_RS10325 PF08255 Trp-operon Leader Peptide FD428_RS10330 PF02811 PHP domain FD428_RS10335 PF01300 Telomere recombination FD428_RS10340 PF00849 RNA pseudouridylate synthase FD428_RS10340 PF01479 S4 domain FD428_RS10345 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FD428_RS10350 PF00106 short chain dehydrogenase FD428_RS10355 PF01343 Peptidase family S49 FD428_RS10355 PF08496 Peptidase family S49 N-terminal FD428_RS10360 PF10692 Protein of unknown function (DUF2498) FD428_RS10365 PF01396 Topoisomerase DNA binding C4 zinc finger FD428_RS10365 PF08272 Topoisomerase I zinc-ribbon-like FD428_RS10365 PF01751 Toprim domain FD428_RS10365 PF01131 DNA topoisomerase FD428_RS10370 PF03466 LysR substrate binding domain FD428_RS10370 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS10380 PF00330 Aconitase family (aconitate hydratase) FD428_RS10380 PF00694 Aconitase C-terminal domain FD428_RS10385 PF00925 GTP cyclohydrolase II FD428_RS10390 PF01569 PAP2 superfamily FD428_RS10395 PF06305 Lipopolysaccharide assembly protein A domain FD428_RS10400 PF18073 Rubredoxin metal binding domain FD428_RS10405 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FD428_RS10410 PF01253 Translation initiation factor SUI1 FD428_RS10415 PF05433 Glycine zipper 2TM domain FD428_RS10420 PF00455 DeoR C terminal sensor domain FD428_RS10420 PF08220 DeoR-like helix-turn-helix domain FD428_RS10435 PF13426 PAS domain FD428_RS10435 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS10435 PF00563 EAL domain FD428_RS10440 PF17876 Cold shock domain FD428_RS10440 PF08206 Ribonuclease B OB domain FD428_RS10440 PF00575 S1 RNA binding domain FD428_RS10440 PF00773 RNB domain FD428_RS10465 PF06977 SdiA-regulated FD428_RS10470 PF00005 ABC transporter FD428_RS10475 PF00005 ABC transporter FD428_RS10475 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS10480 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10480 PF12911 N-terminal TM domain of oligopeptide transport permease C FD428_RS10485 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10490 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS10500 PF00158 Sigma-54 interaction domain FD428_RS10500 PF02954 Bacterial regulatory protein, Fis family FD428_RS10505 PF04012 PspA/IM30 family FD428_RS10510 PF06667 Phage shock protein B FD428_RS10515 PF04024 PspC domain FD428_RS10520 PF09584 Phage shock protein PspD (Phageshock_PspD) FD428_RS10525 PF00128 Alpha amylase, catalytic domain FD428_RS10530 PF01547 Bacterial extracellular solute-binding protein FD428_RS10535 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10540 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS10545 PF00107 Zinc-binding dehydrogenase FD428_RS10550 PF01261 Xylose isomerase-like TIM barrel FD428_RS10555 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD428_RS10555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS10560 PF03636 Glycosyl hydrolase family 65, N-terminal domain FD428_RS10560 PF03632 Glycosyl hydrolase family 65 central catalytic domain FD428_RS10560 PF03633 Glycosyl hydrolase family 65, C-terminal domain FD428_RS10565 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS10570 PF17912 MalK OB fold domain FD428_RS10570 PF00005 ABC transporter FD428_RS10570 PF03459 TOBE domain FD428_RS10575 PF09381 Outer membrane protein G (OmpG) FD428_RS10580 PF00356 Bacterial regulatory proteins, lacI family FD428_RS10580 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FD428_RS10585 PF04317 YcjX-like family, DUF463 FD428_RS10590 PF05128 Domain of unknown function (DUF697) FD428_RS10595 PF00158 Sigma-54 interaction domain FD428_RS10595 PF18024 Helix-turn-helix domain FD428_RS10600 PF08534 Redoxin FD428_RS10605 PF13378 Enolase C-terminal domain-like FD428_RS10605 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD428_RS10610 PF00246 Zinc carboxypeptidase FD428_RS10615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS10620 PF00924 Mechanosensitive ion channel FD428_RS10625 PF10749 Protein of unknown function (DUF2534) FD428_RS10630 PF00582 Universal stress protein family FD428_RS10635 PF14001 YdfZ protein FD428_RS10640 PF13545 Crp-like helix-turn-helix domain FD428_RS10640 PF00027 Cyclic nucleotide-binding domain FD428_RS10645 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain FD428_RS10645 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FD428_RS10650 PF03806 AbgT putative transporter family FD428_RS10655 PF01713 Smr domain FD428_RS10660 PF08448 PAS fold FD428_RS10660 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS10665 PF01544 CorA-like Mg2+ transporter protein FD428_RS10675 PF00271 Helicase conserved C-terminal domain FD428_RS10675 PF03880 DbpA RNA binding domain FD428_RS10675 PF00270 DEAD/DEAH box helicase FD428_RS10680 PF01171 PP-loop family FD428_RS10685 PF00582 Universal stress protein family FD428_RS10695 PF00267 Gram-negative porin FD428_RS10700 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS10700 PF10371 Domain of unknown function FD428_RS10700 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase FD428_RS10700 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg FD428_RS10700 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II FD428_RS10710 PF03891 Domain of unknown function (DUF333) FD428_RS10715 PF03724 META domain FD428_RS10720 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD428_RS10720 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain FD428_RS10725 PF05658 Head domain of trimeric autotransporter adhesin FD428_RS10725 PF03895 YadA-like membrane anchor domain FD428_RS10740 PF11739 Dicarboxylate transport FD428_RS10745 PF13617 YnbE-like lipoprotein FD428_RS10750 PF07027 Protein of unknown function (DUF1318) FD428_RS10755 PF00248 Aldo/keto reductase family FD428_RS10760 PF02525 Flavodoxin-like fold FD428_RS10765 PF04408 Helicase associated domain (HA2) FD428_RS10765 PF00270 DEAD/DEAH box helicase FD428_RS10765 PF11898 Domain of unknown function (DUF3418) FD428_RS10765 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold FD428_RS10765 PF00271 Helicase conserved C-terminal domain FD428_RS10770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS10770 PF03466 LysR substrate binding domain FD428_RS10780 PF02321 Outer membrane efflux protein FD428_RS10785 PF13533 Biotin-lipoyl like FD428_RS10795 PF02698 DUF218 domain FD428_RS10800 PF00171 Aldehyde dehydrogenase family FD428_RS10805 PF07859 alpha/beta hydrolase fold FD428_RS10805 PF13472 GDSL-like Lipase/Acylhydrolase family FD428_RS10810 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FD428_RS10810 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD428_RS10815 PF01292 Prokaryotic cytochrome b561 FD428_RS10820 PF02583 Metal-sensitive transcriptional repressor FD428_RS10825 PF00107 Zinc-binding dehydrogenase FD428_RS10825 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS10830 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS10830 PF00672 HAMP domain FD428_RS10830 PF02203 Tar ligand binding domain homologue FD428_RS10835 PF03466 LysR substrate binding domain FD428_RS10835 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS10840 PF01368 DHH family FD428_RS10840 PF02833 DHHA2 domain FD428_RS10845 PF07063 Domain of unknown function (DUF1338) FD428_RS10850 PF00135 Carboxylesterase family FD428_RS10855 PF04349 Periplasmic glucan biosynthesis protein, MdoG FD428_RS10860 PF04325 Protein of unknown function (DUF465) FD428_RS10865 PF13302 Acetyltransferase (GNAT) domain FD428_RS10870 PF18836 Beta solenoid repeat from YDCK FD428_RS10875 PF03595 Voltage-dependent anion channel FD428_RS10880 PF03848 Tellurite resistance protein TehB FD428_RS10885 PF11769 Protein of unknown function (DUF3313) FD428_RS10890 PF00892 EamA-like transporter family FD428_RS10900 PF03594 Benzoate membrane transport protein FD428_RS10905 PF01381 Helix-turn-helix FD428_RS10905 PF07883 Cupin domain FD428_RS10910 PF12392 Collagenase FD428_RS10910 PF01136 Peptidase family U32 FD428_RS10915 PF07927 HicA toxin of bacterial toxin-antitoxin, FD428_RS10920 PF01381 Helix-turn-helix FD428_RS10920 PF15919 HicB_like antitoxin of bacterial toxin-antitoxin system FD428_RS10925 PF00155 Aminotransferase class I and II FD428_RS10925 PF00392 Bacterial regulatory proteins, gntR family FD428_RS10930 PF00171 Aldehyde dehydrogenase family FD428_RS10940 PF10753 Toxin GhoT_OrtT FD428_RS10960 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS10965 PF10735 Protein of unknown function (DUF2526) FD428_RS10970 PF04657 Putative inner membrane exporter, YdcZ FD428_RS10975 PF00583 Acetyltransferase (GNAT) family FD428_RS10980 PF01381 Helix-turn-helix FD428_RS10980 PF08671 Anti-repressor SinI FD428_RS10985 PF00107 Zinc-binding dehydrogenase FD428_RS10985 PF16884 N-terminal domain of oxidoreductase FD428_RS10990 PF00593 TonB dependent receptor FD428_RS10990 PF07715 TonB-dependent Receptor Plug Domain FD428_RS11000 PF00324 Amino acid permease FD428_RS11005 PF13417 Glutathione S-transferase, N-terminal domain FD428_RS11010 PF01590 GAF domain FD428_RS11010 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS11010 PF00360 Phytochrome region FD428_RS11010 PF00563 EAL domain FD428_RS11015 PF01613 Flavin reductase like domain FD428_RS11020 PF00797 N-acetyltransferase FD428_RS11025 PF02665 Nitrate reductase gamma subunit FD428_RS11030 PF02613 Nitrate reductase delta subunit FD428_RS11035 PF14711 Respiratory nitrate reductase beta C-terminal FD428_RS11035 PF13247 4Fe-4S dicluster domain FD428_RS11040 PF00384 Molybdopterin oxidoreductase FD428_RS11040 PF01568 Molydopterin dinucleotide binding domain FD428_RS11040 PF14710 Respiratory nitrate reductase alpha N-terminal FD428_RS11045 PF07690 Major Facilitator Superfamily FD428_RS11050 PF08361 MAATS-type transcriptional repressor, C-terminal region FD428_RS11050 PF00440 Bacterial regulatory proteins, tetR family FD428_RS11055 PF07690 Major Facilitator Superfamily FD428_RS11065 PF00267 Gram-negative porin FD428_RS11070 PF00892 EamA-like transporter family FD428_RS11080 PF13247 4Fe-4S dicluster domain FD428_RS11080 PF09163 Formate dehydrogenase N, transmembrane FD428_RS11080 PF12800 4Fe-4S binding domain FD428_RS11085 PF01292 Prokaryotic cytochrome b561 FD428_RS11090 PF03949 Malic enzyme, NAD binding domain FD428_RS11090 PF00390 Malic enzyme, N-terminal domain FD428_RS11095 PF08136 30S ribosomal protein subunit S22 family FD428_RS11100 PF02566 OsmC-like protein FD428_RS11105 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS11105 PF00005 ABC transporter FD428_RS11110 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS11110 PF00005 ABC transporter FD428_RS11115 PF12911 N-terminal TM domain of oligopeptide transport permease C FD428_RS11115 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11120 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS11130 PF01427 D-ala-D-ala dipeptidase FD428_RS11140 PF02203 Tar ligand binding domain homologue FD428_RS11140 PF00672 HAMP domain FD428_RS11140 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS11155 PF02638 Glycosyl hydrolase-like 10 FD428_RS11160 PF05192 MutS domain III FD428_RS11160 PF00488 MutS domain V FD428_RS11160 PF01624 MutS domain I FD428_RS11160 PF05190 MutS family domain IV FD428_RS11160 PF05188 MutS domain II FD428_RS11165 PF00488 MutS domain V FD428_RS11165 PF01713 Smr domain FD428_RS11170 PF00113 Enolase, C-terminal TIM barrel domain FD428_RS11170 PF03952 Enolase, N-terminal domain FD428_RS11190 PF13302 Acetyltransferase (GNAT) domain FD428_RS11210 PF01232 Mannitol dehydrogenase Rossmann domain FD428_RS11210 PF08125 Mannitol dehydrogenase C-terminal domain FD428_RS11215 PF13811 Domain of unknown function (DUF4186) FD428_RS11220 PF04960 Glutaminase FD428_RS11225 PF00672 HAMP domain FD428_RS11225 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS11225 PF02203 Tar ligand binding domain homologue FD428_RS11230 PF00171 Aldehyde dehydrogenase family FD428_RS11235 PF03466 LysR substrate binding domain FD428_RS11235 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS11240 PF00056 lactate/malate dehydrogenase, NAD binding domain FD428_RS11240 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain FD428_RS11245 PF07690 Major Facilitator Superfamily FD428_RS11250 PF01914 MarC family integral membrane protein FD428_RS11255 PF01047 MarR family FD428_RS11260 PF12833 Helix-turn-helix domain FD428_RS11265 PF13999 MarB protein FD428_RS11270 PF00892 EamA-like transporter family FD428_RS11275 PF07690 Major Facilitator Superfamily FD428_RS11280 PF00005 ABC transporter FD428_RS11285 PF12399 Branched-chain amino acid ATP-binding cassette transporter FD428_RS11285 PF00005 ABC transporter FD428_RS11290 PF02653 Branched-chain amino acid transport system / permease component FD428_RS11295 PF02653 Branched-chain amino acid transport system / permease component FD428_RS11300 PF13188 PAS domain FD428_RS11300 PF00158 Sigma-54 interaction domain FD428_RS11300 PF02954 Bacterial regulatory protein, Fis family FD428_RS11305 PF01717 Cobalamin-independent synthase, Catalytic domain FD428_RS11315 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS11320 PF00144 Beta-lactamase FD428_RS11325 PF01432 Peptidase family M3 FD428_RS11330 PF00106 short chain dehydrogenase FD428_RS11335 PF00392 Bacterial regulatory proteins, gntR family FD428_RS11335 PF07729 FCD domain FD428_RS11340 PF01232 Mannitol dehydrogenase Rossmann domain FD428_RS11340 PF08125 Mannitol dehydrogenase C-terminal domain FD428_RS11345 PF00083 Sugar (and other) transporter FD428_RS11345 PF07690 Major Facilitator Superfamily FD428_RS11350 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS11350 PF00107 Zinc-binding dehydrogenase FD428_RS11355 PF13378 Enolase C-terminal domain-like FD428_RS11355 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain FD428_RS11360 PF02694 Uncharacterised BCR, YnfA/UPF0060 family FD428_RS11365 PF06932 Protein of unknown function (DUF1283) FD428_RS11370 PF13302 Acetyltransferase (GNAT) domain FD428_RS11375 PF06788 Uncharacterised protein family (UPF0257) FD428_RS11380 PF06649 Protein of unknown function (DUF1161) FD428_RS11390 PF00384 Molybdopterin oxidoreductase FD428_RS11390 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD428_RS11390 PF01568 Molydopterin dinucleotide binding domain FD428_RS11395 PF13247 4Fe-4S dicluster domain FD428_RS11395 PF12800 4Fe-4S binding domain FD428_RS11400 PF04976 DMSO reductase anchor subunit (DmsC) FD428_RS11405 PF02613 Nitrate reductase delta subunit FD428_RS11410 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11415 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FD428_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11425 PF00571 CBS domain FD428_RS11425 PF00005 ABC transporter FD428_RS11430 PF00654 Voltage gated chloride channel FD428_RS11440 PF00480 ROK family FD428_RS11445 PF03466 LysR substrate binding domain FD428_RS11445 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS11450 PF07690 Major Facilitator Superfamily FD428_RS11460 PF02074 Carboxypeptidase Taq (M32) metallopeptidase FD428_RS11470 PF00089 Trypsin FD428_RS11475 PF00893 Small Multidrug Resistance protein FD428_RS11480 PF00893 Small Multidrug Resistance protein FD428_RS11490 PF01594 AI-2E family transporter FD428_RS11495 PF02233 NAD(P) transhydrogenase beta subunit FD428_RS11500 PF12769 4TM region of pyridine nucleotide transhydrogenase, mitoch FD428_RS11500 PF01262 Alanine dehydrogenase/PNT, C-terminal domain FD428_RS11500 PF05222 Alanine dehydrogenase/PNT, N-terminal domain FD428_RS11510 PF07338 Protein of unknown function (DUF1471) FD428_RS11515 PF13520 Amino acid permease FD428_RS11525 PF06942 GlpM protein FD428_RS11530 PF00486 Transcriptional regulatory protein, C terminal FD428_RS11530 PF00072 Response regulator receiver domain FD428_RS11535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS11535 PF00672 HAMP domain FD428_RS11535 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS11540 PF05472 DNA replication terminus site-binding protein (Ter protein) FD428_RS11545 PF10415 Fumarase C C-terminus FD428_RS11545 PF00206 Lyase FD428_RS11550 PF05683 Fumarase C-terminus FD428_RS11550 PF05681 Fumarate hydratase (Fumerase) FD428_RS11555 PF01238 Phosphomannose isomerase type I FD428_RS11560 PF06097 Bacterial protein of unknown function (DUF945) FD428_RS11565 PF00356 Bacterial regulatory proteins, lacI family FD428_RS11565 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FD428_RS11570 PF00367 phosphotransferase system, EIIB FD428_RS11570 PF02378 Phosphotransferase system, EIIC FD428_RS11575 PF00155 Aminotransferase class I and II FD428_RS11580 PF00962 Adenosine/AMP deaminase FD428_RS11590 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS11590 PF02894 Oxidoreductase family, C-terminal alpha/beta domain FD428_RS11600 PF05321 Haemolysin expression modulating protein FD428_RS11605 PF10754 Protein of unknown function (DUF2569) FD428_RS11610 PF02508 Rnf-Nqr subunit, membrane protein FD428_RS11615 PF04060 Putative Fe-S cluster FD428_RS11620 PF10531 SLBB domain FD428_RS11620 PF13375 RnfC Barrel sandwich hybrid domain FD428_RS11620 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit FD428_RS11620 PF13237 4Fe-4S dicluster domain FD428_RS11625 PF03116 NQR2, RnfD, RnfE family FD428_RS11630 PF04205 FMN-binding domain FD428_RS11635 PF02508 Rnf-Nqr subunit, membrane protein FD428_RS11640 PF00633 Helix-hairpin-helix motif FD428_RS11640 PF00730 HhH-GPD superfamily base excision DNA repair protein FD428_RS11640 PF10576 Iron-sulfur binding domain of endonuclease III FD428_RS11645 PF00854 POT family FD428_RS11650 PF02798 Glutathione S-transferase, N-terminal domain FD428_RS11650 PF00043 Glutathione S-transferase, C-terminal domain FD428_RS11655 PF08543 Phosphomethylpyrimidine kinase FD428_RS11660 PF00579 tRNA synthetases class I (W and Y) FD428_RS11660 PF01479 S4 domain FD428_RS11665 PF01243 Pyridoxamine 5'-phosphate oxidase FD428_RS11665 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region FD428_RS11670 PF09864 Membrane-bound lysozyme-inhibitor of c-type lysozyme FD428_RS11675 PF03702 Anhydro-N-acetylmuramic acid kinase FD428_RS11680 PF05433 Glycine zipper 2TM domain FD428_RS11685 PF01047 MarR family FD428_RS11690 PF07869 Protein of unknown function (DUF1656) FD428_RS11695 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS11695 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS11700 PF04632 Fusaric acid resistance protein family FD428_RS11705 PF00080 Copper/zinc superoxide dismutase (SODC) FD428_RS11710 PF00248 Aldo/keto reductase family FD428_RS11715 PF06945 Protein of unknown function (DUF1289) FD428_RS11720 PF00440 Bacterial regulatory proteins, tetR family FD428_RS11720 PF16925 Tetracyclin repressor-like, C-terminal domain FD428_RS11725 PF00724 NADH:flavin oxidoreductase / NADH oxidase family FD428_RS11730 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FD428_RS11735 PF00929 Exonuclease FD428_RS11740 PF00462 Glutaredoxin FD428_RS11745 PF00877 NlpC/P60 family FD428_RS11750 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FD428_RS11750 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FD428_RS11755 PF07690 Major Facilitator Superfamily FD428_RS11765 PF00356 Bacterial regulatory proteins, lacI family FD428_RS11770 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS11770 PF03466 LysR substrate binding domain FD428_RS11775 PF07690 Major Facilitator Superfamily FD428_RS11785 PF00677 Lumazine binding domain FD428_RS11790 PF01554 MatE FD428_RS11805 PF07715 TonB-dependent Receptor Plug Domain FD428_RS11805 PF00593 TonB dependent receptor FD428_RS11810 PF00756 Putative esterase FD428_RS11830 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS11835 PF00005 ABC transporter FD428_RS11840 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11845 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11855 PF01292 Prokaryotic cytochrome b561 FD428_RS11860 PF13247 4Fe-4S dicluster domain FD428_RS11870 PF01314 Aldehyde ferredoxin oxidoreductase, domains 2 & 3 FD428_RS11870 PF02730 Aldehyde ferredoxin oxidoreductase, N-terminal domain FD428_RS11875 PF12800 4Fe-4S binding domain FD428_RS11875 PF13247 4Fe-4S dicluster domain FD428_RS11880 PF10965 Protein of unknown function (DUF2767) FD428_RS11885 PF03180 NLPA lipoprotein FD428_RS11890 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS11895 PF00005 ABC transporter FD428_RS11895 PF09383 NIL domain FD428_RS11900 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS11900 PF00571 CBS domain FD428_RS11905 PF01053 Cys/Met metabolism PLP-dependent enzyme FD428_RS11910 PF00224 Pyruvate kinase, barrel domain FD428_RS11910 PF02887 Pyruvate kinase, alpha/beta domain FD428_RS11915 PF04728 Lipoprotein leucine-zipper FD428_RS11920 PF03734 L,D-transpeptidase catalytic domain FD428_RS11920 PF17969 L,D-transpeptidase C-terminal domain FD428_RS11920 PF01476 LysM domain FD428_RS11925 PF02657 Fe-S metabolism associated domain FD428_RS11930 PF00266 Aminotransferase class-V FD428_RS11935 PF01458 Uncharacterized protein family (UPF0051) FD428_RS11940 PF00005 ABC transporter FD428_RS11945 PF01458 Uncharacterized protein family (UPF0051) FD428_RS11950 PF01521 Iron-sulphur cluster biosynthesis FD428_RS11955 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS11955 PF03466 LysR substrate binding domain FD428_RS11965 PF15930 Domain of unknown function FD428_RS11970 PF03061 Thioesterase superfamily FD428_RS11975 PF02913 FAD linked oxidases, C-terminal domain FD428_RS11975 PF01565 FAD binding domain FD428_RS11975 PF13183 4Fe-4S dicluster domain FD428_RS11980 PF01594 AI-2E family transporter FD428_RS11990 PF00391 PEP-utilising enzyme, mobile domain FD428_RS11990 PF02896 PEP-utilising enzyme, TIM barrel domain FD428_RS11990 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain FD428_RS11995 PF03618 Kinase/pyrophosphorylase FD428_RS12000 PF00793 DAHP synthetase I family FD428_RS12005 PF10636 Hemin uptake protein hemP FD428_RS12010 PF02696 Uncharacterized ACR, YdiU/UPF0061 family FD428_RS12015 PF00563 EAL domain FD428_RS12020 PF00877 NlpC/P60 family FD428_RS12025 PF00005 ABC transporter FD428_RS12030 PF00255 Glutathione peroxidase FD428_RS12040 PF01032 FecCD transport family FD428_RS12045 PF00216 Bacterial DNA-binding protein FD428_RS12050 PF03484 tRNA synthetase B5 domain FD428_RS12050 PF03483 B3/4 domain FD428_RS12050 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain FD428_RS12050 PF03147 Ferredoxin-fold anticodon binding domain FD428_RS12050 PF01588 Putative tRNA binding domain FD428_RS12055 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain FD428_RS12055 PF01409 tRNA synthetases class II core domain (F) FD428_RS12065 PF00453 Ribosomal protein L20 FD428_RS12070 PF01632 Ribosomal protein L35 FD428_RS12075 PF00707 Translation initiation factor IF-3, C-terminal domain FD428_RS12075 PF05198 Translation initiation factor IF-3, N-terminal domain FD428_RS12080 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain FD428_RS12080 PF02824 TGS domain FD428_RS12080 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FD428_RS12080 PF03129 Anticodon binding domain FD428_RS12090 PF04338 Protein of unknown function, DUF481 FD428_RS12095 PF00294 pfkB family carbohydrate kinase FD428_RS12100 PF11080 Endoribonuclease GhoS FD428_RS12105 PF03881 Fructosamine kinase FD428_RS12110 PF14002 YniB-like protein FD428_RS12115 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS12125 PF04307 LexA-binding, inner membrane-associated putative hydrolase FD428_RS12130 PF00375 Sodium:dicarboxylate symporter family FD428_RS12135 PF10729 Cell division activator CedA FD428_RS12140 PF04794 YdjC-like protein FD428_RS12145 PF11975 Family 4 glycosyl hydrolase C-terminal domain FD428_RS12145 PF02056 Family 4 glycosyl hydrolase FD428_RS12150 PF12833 Helix-turn-helix domain FD428_RS12150 PF07883 Cupin domain FD428_RS12155 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FD428_RS12160 PF02378 Phosphotransferase system, EIIC FD428_RS12165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS12175 PF04355 SmpA / OmlA family FD428_RS12180 PF02540 NAD synthase FD428_RS12185 PF05962 HutD FD428_RS12190 PF07813 LTXXQ motif family protein FD428_RS12195 PF04952 Succinylglutamate desuccinylase / Aspartoacylase family FD428_RS12200 PF04996 Succinylarginine dihydrolase FD428_RS12205 PF00171 Aldehyde dehydrogenase family FD428_RS12210 PF04958 Arginine N-succinyltransferase beta subunit FD428_RS12215 PF00202 Aminotransferase class-III FD428_RS12220 PF03372 Endonuclease/Exonuclease/phosphatase family FD428_RS12230 PF13416 Bacterial extracellular solute-binding protein FD428_RS12235 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS12240 PF00005 ABC transporter FD428_RS12245 PF00581 Rhodanese-like domain FD428_RS12250 PF01066 CDP-alcohol phosphatidyltransferase FD428_RS12255 PF02627 Carboxymuconolactone decarboxylase family FD428_RS12260 PF00293 NUDIX domain FD428_RS12265 PF07383 Protein of unknown function (DUF1496) FD428_RS12270 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase FD428_RS12270 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain FD428_RS12275 PF01131 DNA topoisomerase FD428_RS12275 PF01751 Toprim domain FD428_RS12280 PF02769 AIR synthase related protein, C-terminal domain FD428_RS12280 PF00586 AIR synthase related protein, N-terminal domain FD428_RS12285 PF00881 Nitroreductase family FD428_RS12290 PF01343 Peptidase family S49 FD428_RS12295 PF17763 Glutaminase/Asparaginase C-terminal domain FD428_RS12295 PF00710 Asparaginase, N-terminal FD428_RS12300 PF00857 Isochorismatase family FD428_RS12305 PF07023 Protein of unknown function (DUF1315) FD428_RS12315 PF01641 SelR domain FD428_RS12320 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain FD428_RS12320 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain FD428_RS12325 PF01263 Aldose 1-epimerase FD428_RS12330 PF06629 MltA-interacting protein MipA FD428_RS12335 PF06798 PrkA serine protein kinase C-terminal domain FD428_RS12335 PF08298 PrkA AAA domain FD428_RS12340 PF04285 Protein of unknown function (DUF444) FD428_RS12345 PF13649 Methyltransferase domain FD428_RS12350 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS12350 PF17155 Gammaproteobacterial periplasmic sensor domain FD428_RS12355 PF04073 Aminoacyl-tRNA editing domain FD428_RS12365 PF04284 Protein of unknown function (DUF441) FD428_RS12370 PF02311 AraC-like ligand binding domain FD428_RS12370 PF12833 Helix-turn-helix domain FD428_RS12375 PF07690 Major Facilitator Superfamily FD428_RS12380 PF00117 Glutamine amidotransferase class-I FD428_RS12380 PF06418 CTP synthase N-terminus FD428_RS12385 PF04343 Protein of unknown function, DUF488 FD428_RS12390 PF03891 Domain of unknown function (DUF333) FD428_RS12405 PF04226 Transglycosylase associated protein FD428_RS12410 PF01568 Molydopterin dinucleotide binding domain FD428_RS12410 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD428_RS12410 PF00384 Molybdopterin oxidoreductase FD428_RS12420 PF08956 Domain of unknown function (DUF1869) FD428_RS12425 PF09313 Domain of unknown function (DUF1971) FD428_RS12430 PF01810 LysE type translocator FD428_RS12435 PF09223 ZinT (YodA) periplasmic lipocalin-like zinc-recruitment FD428_RS12440 PF01568 Molydopterin dinucleotide binding domain FD428_RS12440 PF18364 Molybdopterin oxidoreductase N-terminal domain FD428_RS12440 PF00384 Molybdopterin oxidoreductase FD428_RS12445 PF03264 NapC/NirT cytochrome c family, N-terminal region FD428_RS12450 PF00582 Universal stress protein family FD428_RS12455 PF03279 Bacterial lipid A biosynthesis acyltransferase FD428_RS12465 PF00180 Isocitrate/isopropylmalate dehydrogenase FD428_RS12470 PF00849 RNA pseudouridylate synthase FD428_RS12475 PF00293 NUDIX domain FD428_RS12485 PF04356 Protein of unknown function (DUF489) FD428_RS12490 PF08328 Adenylosuccinate lyase C-terminal FD428_RS12490 PF00206 Lyase FD428_RS12495 PF00486 Transcriptional regulatory protein, C terminal FD428_RS12495 PF00072 Response regulator receiver domain FD428_RS12500 PF08918 PhoQ Sensor FD428_RS12500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS12505 PF08007 Cupin superfamily protein FD428_RS12510 PF01546 Peptidase family M20/M25/M40 FD428_RS12510 PF07687 Peptidase dimerisation domain FD428_RS12515 PF08402 TOBE domain FD428_RS12515 PF00005 ABC transporter FD428_RS12520 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS12525 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS12530 PF13416 Bacterial extracellular solute-binding protein FD428_RS12535 PF02146 Sir2 family FD428_RS12540 PF00480 ROK family FD428_RS12545 PF02687 FtsX-like permease family FD428_RS12545 PF12704 MacB-like periplasmic core domain FD428_RS12550 PF00005 ABC transporter FD428_RS12555 PF12704 MacB-like periplasmic core domain FD428_RS12555 PF02687 FtsX-like permease family FD428_RS12560 PF01757 Acyltransferase family FD428_RS12565 PF02559 CarD-like/TRCF domain FD428_RS12565 PF00270 DEAD/DEAH box helicase FD428_RS12565 PF00271 Helicase conserved C-terminal domain FD428_RS12565 PF03461 TRCF domain FD428_RS12565 PF17757 UvrB interaction domain FD428_RS12570 PF01476 LysM domain FD428_RS12570 PF03734 L,D-transpeptidase catalytic domain FD428_RS12570 PF17969 L,D-transpeptidase C-terminal domain FD428_RS12575 PF07338 Protein of unknown function (DUF1471) FD428_RS12580 PF00440 Bacterial regulatory proteins, tetR family FD428_RS12585 PF05433 Glycine zipper 2TM domain FD428_RS12590 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS12595 PF05728 Uncharacterised protein family (UPF0227) FD428_RS12600 PF00933 Glycosyl hydrolase family 3 N terminal domain FD428_RS12605 PF01636 Phosphotransferase enzyme family FD428_RS12610 PF13036 Peptidoglycan-synthase activator LpoB FD428_RS12615 PF07233 Protein of unknown function (DUF1425) FD428_RS12620 PF01230 HIT domain FD428_RS12625 PF07715 TonB-dependent Receptor Plug Domain FD428_RS12625 PF00593 TonB dependent receptor FD428_RS12630 PF02378 Phosphotransferase system, EIIC FD428_RS12630 PF00367 phosphotransferase system, EIIB FD428_RS12635 PF01026 TatD related DNase FD428_RS12640 PF09115 DNA polymerase III, delta subunit, C terminal FD428_RS12645 PF02223 Thymidylate kinase FD428_RS12650 PF02618 YceG-like family FD428_RS12655 PF01063 Amino-transferase class IV FD428_RS12660 PF00109 Beta-ketoacyl synthase, N-terminal domain FD428_RS12660 PF02801 Beta-ketoacyl synthase, C-terminal domain FD428_RS12665 PF00550 Phosphopantetheine attachment site FD428_RS12675 PF00698 Acyl transferase domain FD428_RS12680 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III FD428_RS12680 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal FD428_RS12685 PF02504 Fatty acid synthesis protein FD428_RS12690 PF01783 Ribosomal L32p protein family FD428_RS12695 PF02620 Large ribosomal RNA subunit accumulation protein YceD FD428_RS12700 PF02545 Maf-like protein FD428_RS12705 PF01479 S4 domain FD428_RS12705 PF00849 RNA pseudouridylate synthase FD428_RS12710 PF12111 Polyribonucleotide phosphorylase C terminal FD428_RS12710 PF00575 S1 RNA binding domain FD428_RS12710 PF10150 Ribonuclease E/G family FD428_RS12715 PF00669 Bacterial flagellin N-terminal helical region FD428_RS12720 PF00460 Flagella basal body rod protein FD428_RS12720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS12725 PF10135 Rod binding protein FD428_RS12725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase FD428_RS12730 PF02119 Flagellar P-ring protein FD428_RS12735 PF02107 Flagellar L-ring protein FD428_RS12740 PF00460 Flagella basal body rod protein FD428_RS12740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS12745 PF00460 Flagella basal body rod protein FD428_RS12745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS12750 PF07559 Flagellar basal body protein FlaE FD428_RS12750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS12750 PF00460 Flagella basal body rod protein FD428_RS12755 PF13861 FlgD Tudor-like domain FD428_RS12755 PF13860 FlgD Ig-like domain FD428_RS12755 PF03963 Flagellar hook capping protein - N-terminal region FD428_RS12760 PF00460 Flagella basal body rod protein FD428_RS12760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS12765 PF00460 Flagella basal body rod protein FD428_RS12770 PF13144 Chaperone for flagella basal body P-ring formation FD428_RS12775 PF04316 Anti-sigma-28 factor, FlgM FD428_RS12780 PF05130 FlgN protein FD428_RS12785 PF03023 Lipid II flippase MurJ FD428_RS12790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold FD428_RS12795 PF04337 Protein of unknown function, DUF480 FD428_RS12800 PF13302 Acetyltransferase (GNAT) domain FD428_RS12805 PF07690 Major Facilitator Superfamily FD428_RS12810 PF04399 Glutaredoxin 2, C terminal domain FD428_RS12810 PF13417 Glutathione S-transferase, N-terminal domain FD428_RS12815 PF07273 Protein of unknown function (DUF1439) FD428_RS12820 PF01979 Amidohydrolase family FD428_RS12825 PF06183 DinI-like family FD428_RS12830 PF13991 BssS protein family FD428_RS12835 PF01266 FAD dependent oxidoreductase FD428_RS12840 PF10968 Protein of unknown function (DUF2770) FD428_RS12845 PF01292 Prokaryotic cytochrome b561 FD428_RS12850 PF04264 YceI-like domain FD428_RS12855 PF17773 UPF0176 acylphosphatase like domain FD428_RS12855 PF00581 Rhodanese-like domain FD428_RS12855 PF12368 Rhodanase C-terminal FD428_RS12860 PF03279 Bacterial lipid A biosynthesis acyltransferase FD428_RS12865 PF07690 Major Facilitator Superfamily FD428_RS12870 PF13984 MsyB protein FD428_RS12875 PF07119 Protein of unknown function (DUF1375) FD428_RS12880 PF00535 Glycosyl transferase family 2 FD428_RS12885 PF04349 Periplasmic glucan biosynthesis protein, MdoG FD428_RS12890 PF01757 Acyltransferase family FD428_RS12895 PF13091 PLD-like domain FD428_RS12900 PF01661 Macro domain FD428_RS12910 PF10610 Thin aggregative fimbriae synthesis protein FD428_RS12915 PF07012 Curlin associated repeat FD428_RS12920 PF07012 Curlin associated repeat FD428_RS12925 PF00196 Bacterial regulatory proteins, luxR family FD428_RS12930 PF10627 Curli assembly protein CsgE FD428_RS12935 PF10614 Type VIII secretion system (T8SS), CsgF protein FD428_RS12940 PF03783 Curli production assembly/transport component CsgG FD428_RS12945 PF06496 Protein of unknown function (DUF1097) FD428_RS12950 PF02613 Nitrate reductase delta subunit FD428_RS12955 PF02811 PHP domain FD428_RS12960 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain FD428_RS12970 PF02562 PhoH-like protein FD428_RS12975 PF00474 Sodium:solute symporter family FD428_RS12985 PF18327 Proline utilization A proline dehydrogenase N-terminal domain FD428_RS12985 PF00171 Aldehyde dehydrogenase family FD428_RS12985 PF01619 Proline dehydrogenase FD428_RS12985 PF14850 DNA-binding domain of Proline dehydrogenase FD428_RS12995 PF00440 Bacterial regulatory proteins, tetR family FD428_RS12995 PF08362 YcdC-like protein, C-terminal region FD428_RS13000 PF10685 Stress-induced bacterial acidophilic repeat motif FD428_RS13005 PF03358 NADPH-dependent FMN reductase FD428_RS13010 PF13993 YccJ-like protein FD428_RS13015 PF00328 Histidine phosphatase superfamily (branch 2) FD428_RS13030 PF02687 FtsX-like permease family FD428_RS13030 PF12704 MacB-like periplasmic core domain FD428_RS13030 PF00005 ABC transporter FD428_RS13035 PF00005 ABC transporter FD428_RS13035 PF12704 MacB-like periplasmic core domain FD428_RS13035 PF02687 FtsX-like permease family FD428_RS13040 PF00005 ABC transporter FD428_RS13040 PF02687 FtsX-like permease family FD428_RS13040 PF12704 MacB-like periplasmic core domain FD428_RS13050 PF10634 Fe2+ transport protein FD428_RS13055 PF03239 Iron permease FTR1 family FD428_RS13065 PF04205 FMN-binding domain FD428_RS13070 PF00578 AhpC/TSA family FD428_RS13075 PF13462 Thioredoxin FD428_RS13075 PF06965 Na+/H+ antiporter 1 FD428_RS13080 PF11412 Disulphide bond corrector protein DsbC FD428_RS13080 PF02683 Cytochrome C biogenesis protein transmembrane region FD428_RS13080 PF13098 Thioredoxin-like domain FD428_RS13090 PF00226 DnaJ domain FD428_RS13090 PF01556 DnaJ C terminal domain FD428_RS13100 PF12801 4Fe-4S binding domain FD428_RS13105 PF00005 ABC transporter FD428_RS13110 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS13125 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS13130 PF02615 Malate/L-lactate dehydrogenase FD428_RS13140 PF00005 ABC transporter FD428_RS13145 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS13170 PF02954 Bacterial regulatory protein, Fis family FD428_RS13170 PF00072 Response regulator receiver domain FD428_RS13170 PF14532 Sigma-54 interaction domain FD428_RS13175 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS13175 PF00672 HAMP domain FD428_RS13175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS13185 PF07690 Major Facilitator Superfamily FD428_RS13195 PF01027 Inhibitor of apoptosis-promoting Bax1 FD428_RS13200 PF04358 DsrC like protein FD428_RS13205 PF00708 Acylphosphatase FD428_RS13210 PF10672 S-adenosylmethionine-dependent methyltransferase FD428_RS13210 PF17785 PUA-like domain FD428_RS13215 PF08755 Hemimethylated DNA-binding protein YccV like FD428_RS13220 PF13380 CoA binding domain FD428_RS13225 PF09829 Uncharacterized protein conserved in bacteria (DUF2057) FD428_RS13230 PF02142 MGS-like domain FD428_RS13235 PF13361 UvrD-like helicase C-terminal domain FD428_RS13235 PF00580 UvrD/REP helicase N-terminal domain FD428_RS13235 PF12462 DNA helicase IV / RNA helicase N terminal FD428_RS13240 PF03733 Inner membrane component domain FD428_RS13245 PF12805 FUSC-like inner membrane protein yccS FD428_RS13250 PF04994 TfoX C-terminal domain FD428_RS13250 PF04993 TfoX N-terminal domain FD428_RS13255 PF03846 Cell division inhibitor SulA FD428_RS13260 PF01389 OmpA-like transmembrane domain FD428_RS13260 PF00691 OmpA family FD428_RS13265 PF06303 MatP N-terminal domain FD428_RS13265 PF17414 MatP C-terminal ribbon-helix-helix domain FD428_RS13270 PF05362 Lon protease (S16) C-terminal proteolytic domain FD428_RS13270 PF13654 AAA domain FD428_RS13275 PF07977 FabA-like domain FD428_RS13280 PF04957 Ribosome modulation factor FD428_RS13285 PF03886 ABC-type transport auxiliary lipoprotein component FD428_RS13290 PF02470 MlaD protein FD428_RS13295 PF04403 Paraquat-inducible protein A FD428_RS13300 PF00005 ABC transporter FD428_RS13300 PF16326 ABC transporter C-terminal domain FD428_RS13300 PF12848 ABC transporter FD428_RS13305 PF10672 S-adenosylmethionine-dependent methyltransferase FD428_RS13305 PF02926 THUMP domain FD428_RS13305 PF01170 Putative RNA methylase family UPF0020 FD428_RS13310 PF03476 MOSC N-terminal beta barrel domain FD428_RS13310 PF03473 MOSC domain FD428_RS13310 PF00111 2Fe-2S iron-sulfur cluster binding domain FD428_RS13315 PF07126 Cell-division protein ZapC FD428_RS13320 PF01180 Dihydroorotate dehydrogenase FD428_RS13330 PF03358 NADPH-dependent FMN reductase FD428_RS13335 PF09084 NMT1/THI5 like FD428_RS13340 PF00296 Luciferase-like monooxygenase FD428_RS13345 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS13350 PF00005 ABC transporter FD428_RS13355 PF11940 Domain of unknown function (DUF3458) Ig-like fold FD428_RS13355 PF17432 Domain of unknown function (DUF3458_C) ARM repeats FD428_RS13355 PF01433 Peptidase family M1 domain FD428_RS13360 PF11380 Stealth protein CR2, conserved region 2 FD428_RS13360 PF17101 Stealth protein CR1, conserved region 1 FD428_RS13360 PF17103 Stealth protein CR4, conserved region 4 FD428_RS13365 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family FD428_RS13365 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain FD428_RS13370 PF00152 tRNA synthetases class II (D, K and N) FD428_RS13370 PF01336 OB-fold nucleic acid binding domain FD428_RS13375 PF00267 Gram-negative porin FD428_RS13380 PF00155 Aminotransferase class I and II FD428_RS13385 PF00753 Metallo-beta-lactamase superfamily FD428_RS13390 PF05951 Bacterial protein of unknown function (DUF882) FD428_RS13395 PF01471 Putative peptidoglycan binding domain FD428_RS13395 PF03734 L,D-transpeptidase catalytic domain FD428_RS13400 PF16330 MukB hinge domain FD428_RS13400 PF04310 MukB N-terminal FD428_RS13405 PF04288 MukE-like family FD428_RS13410 PF17192 MukF middle domain FD428_RS13410 PF03882 MukF winged-helix domain FD428_RS13410 PF17193 MukF C-terminal domain FD428_RS13415 PF13847 Methyltransferase domain FD428_RS13420 PF02698 DUF218 domain FD428_RS13425 PF01636 Phosphotransferase enzyme family FD428_RS13430 PF02348 Cytidylyltransferase FD428_RS13435 PF03966 Trm112p-like protein FD428_RS13440 PF06224 Winged helix DNA-binding domain FD428_RS13445 PF02606 Tetraacyldisaccharide-1-P 4'-kinase FD428_RS13450 PF00005 ABC transporter FD428_RS13450 PF00664 ABC transporter transmembrane region FD428_RS13455 PF00753 Metallo-beta-lactamase superfamily FD428_RS13455 PF03772 Competence protein FD428_RS13460 PF00216 Bacterial DNA-binding protein FD428_RS13465 PF00575 S1 RNA binding domain FD428_RS13470 PF02224 Cytidylate kinase FD428_RS13475 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) FD428_RS13480 PF00266 Aminotransferase class-V FD428_RS13485 PF02624 YcaO cyclodehydratase, ATP-ad Mg2+-binding FD428_RS13485 PF18381 YcaO cyclodehydratase C-terminal domain FD428_RS13490 PF01226 Formate/nitrite transporter FD428_RS13495 PF02901 Pyruvate formate lyase-like FD428_RS13495 PF01228 Glycine radical FD428_RS13515 PF02413 Caudovirales tail fibre assembly protein, lambda gpK FD428_RS13670 PF02899 Phage integrase, N-terminal SAM-like domain FD428_RS13670 PF00589 Phage integrase family FD428_RS13675 PF04055 Radical SAM superfamily FD428_RS13680 PF07690 Major Facilitator Superfamily FD428_RS13685 PF00857 Isochorismatase family FD428_RS13690 PF04976 DMSO reductase anchor subunit (DmsC) FD428_RS13695 PF13247 4Fe-4S dicluster domain FD428_RS13695 PF12800 4Fe-4S binding domain FD428_RS13700 PF04879 Molybdopterin oxidoreductase Fe4S4 domain FD428_RS13700 PF00384 Molybdopterin oxidoreductase FD428_RS13700 PF01568 Molydopterin dinucleotide binding domain FD428_RS13705 PF02403 Seryl-tRNA synthetase N-terminal domain FD428_RS13705 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FD428_RS13710 PF00004 ATPase family associated with various cellular activities (AAA) FD428_RS13710 PF16193 AAA C-terminal domain FD428_RS13710 PF12002 MgsA AAA+ ATPase C terminal FD428_RS13715 PF03548 Outer membrane lipoprotein carrier protein LolA FD428_RS13720 PF01580 FtsK/SpoIIIE family FD428_RS13720 PF17854 FtsK alpha domain FD428_RS13720 PF09397 Ftsk gamma domain FD428_RS13720 PF13491 4TM region of DNA translocase FtsK/SpoIIIE FD428_RS13725 PF01037 Lrp/AsnC ligand binding domain FD428_RS13730 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS13735 PF00005 ABC transporter FD428_RS13735 PF00664 ABC transporter transmembrane region FD428_RS13740 PF00005 ABC transporter FD428_RS13740 PF00664 ABC transporter transmembrane region FD428_RS13745 PF03588 Leucyl/phenylalanyl-tRNA protein transferase FD428_RS13755 PF01176 Translation initiation factor 1A / IF-1 FD428_RS13760 PF03466 LysR substrate binding domain FD428_RS13760 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS13765 PF05726 Pirin C-terminal cupin domain FD428_RS13765 PF02678 Pirin FD428_RS13770 PF00857 Isochorismatase family FD428_RS13780 PF09618 CRISPR-associated protein (Cas_Csy4) FD428_RS13785 PF09615 CRISPR-associated protein (Cas_Csy3) FD428_RS13790 PF09614 CRISPR-associated protein (Cas_Csy2) FD428_RS13795 PF09611 CRISPR-associated protein (Cas_Csy1) FD428_RS13805 PF01867 CRISPR associated protein Cas1 FD428_RS13810 PF17871 AAA lid domain FD428_RS13810 PF10431 C-terminal, D2-small domain, of ClpB protein FD428_RS13810 PF00004 ATPase family associated with various cellular activities (AAA) FD428_RS13810 PF07724 AAA domain (Cdc48 subfamily) FD428_RS13810 PF02861 Clp amino terminal domain, pathogenicity island component FD428_RS13815 PF02617 ATP-dependent Clp protease adaptor protein ClpS FD428_RS13820 PF00313 'Cold-shock' DNA-binding domain FD428_RS13825 PF00005 ABC transporter FD428_RS13825 PF02687 FtsX-like permease family FD428_RS13825 PF12704 MacB-like periplasmic core domain FD428_RS13830 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS13835 PF11398 Protein of unknown function (DUF2813) FD428_RS13840 PF00230 Major intrinsic protein FD428_RS13845 PF03956 Lysine exporter LysO FD428_RS13850 PF03063 Prismane/CO dehydrogenase family FD428_RS13855 PF00111 2Fe-2S iron-sulfur cluster binding domain FD428_RS13855 PF00970 Oxidoreductase FAD-binding domain FD428_RS13855 PF00175 Oxidoreductase NAD-binding domain FD428_RS13865 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS13865 PF00205 Thiamine pyrophosphate enzyme, central domain FD428_RS13865 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS13870 PF01212 Beta-eliminating lyase FD428_RS13875 PF11066 Protein of unknown function (DUF2867) FD428_RS13875 PF13460 NAD(P)H-binding FD428_RS13880 PF01370 NAD dependent epimerase/dehydratase family FD428_RS13885 PF03067 Lytic polysaccharide mono-oxygenase, cellulose-degrading FD428_RS13885 PF18416 N-acetylglucosamine binding protein domain 2 FD428_RS13890 PF01464 Transglycosylase SLT domain FD428_RS13895 PF00704 Glycosyl hydrolases family 18 FD428_RS13895 PF08329 Chitinase A, N-terminal domain FD428_RS13900 PF06750 Bacterial Peptidase A24 N-terminal domain FD428_RS13900 PF01478 Type IV leader peptidase family FD428_RS13910 PF12693 GspL periplasmic domain FD428_RS13910 PF05134 Type II secretion system (T2SS), protein L FD428_RS13915 PF03934 Type II secretion system (T2SS), protein K FD428_RS13920 PF11612 Type II secretion system (T2SS), protein J FD428_RS13920 PF07963 Prokaryotic N-terminal methylation motif FD428_RS13925 PF02501 Type II secretion system (T2SS), protein I FD428_RS13925 PF07963 Prokaryotic N-terminal methylation motif FD428_RS13930 PF07963 Prokaryotic N-terminal methylation motif FD428_RS13935 PF08334 Type II secretion system (T2SS), protein G FD428_RS13935 PF07963 Prokaryotic N-terminal methylation motif FD428_RS13940 PF00482 Type II secretion system (T2SS), protein F FD428_RS13945 PF00437 Type II/IV secretion system protein FD428_RS13950 PF00263 Bacterial type II and III secretion system protein FD428_RS13950 PF03958 Bacterial type II/III secretion system short domain FD428_RS13970 PF15977 Winged helix-turn-helix DNA binding FD428_RS13975 PF01510 N-acetylmuramoyl-L-alanine amidase FD428_RS13980 PF01906 Putative heavy-metal-binding FD428_RS13985 PF12883 Protein of unknown function (DUF3828) FD428_RS13990 PF00005 ABC transporter FD428_RS13995 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS14000 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14005 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14010 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS14015 PF00989 PAS fold FD428_RS14015 PF16736 Single Cache-like FD428_RS14015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS14015 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS14020 PF00486 Transcriptional regulatory protein, C terminal FD428_RS14020 PF00072 Response regulator receiver domain FD428_RS14025 PF05958 tRNA (Uracil-5-)-methyltransferase FD428_RS14030 PF10767 Protein of unknown function (DUF2593) FD428_RS14035 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14040 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14045 PF00005 ABC transporter FD428_RS14045 PF08402 TOBE domain FD428_RS14050 PF13416 Bacterial extracellular solute-binding protein FD428_RS14055 PF10722 Putative bacterial sensory transduction regulator FD428_RS14060 PF18030 RimK PreATP-grasp domain FD428_RS14060 PF08443 RimK-like ATP-grasp domain FD428_RS14065 PF00881 Nitroreductase family FD428_RS14070 PF07214 Protein of unknown function (DUF1418) FD428_RS14075 PF00462 Glutaredoxin FD428_RS14080 PF11045 Putative inner membrane protein of Enterobacteriaceae FD428_RS14085 PF06826 Predicted Permease Membrane Region FD428_RS14085 PF02080 TrkA-C domain FD428_RS14090 PF00440 Bacterial regulatory proteins, tetR family FD428_RS14095 PF07690 Major Facilitator Superfamily FD428_RS14105 PF07690 Major Facilitator Superfamily FD428_RS14110 PF01569 PAP2 superfamily FD428_RS14115 PF08220 DeoR-like helix-turn-helix domain FD428_RS14115 PF00455 DeoR C terminal sensor domain FD428_RS14120 PF07943 Penicillin-binding protein 5, C-terminal domain FD428_RS14120 PF00768 D-alanyl-D-alanine carboxypeptidase FD428_RS14125 PF13417 Glutathione S-transferase, N-terminal domain FD428_RS14125 PF00043 Glutathione S-transferase, C-terminal domain FD428_RS14130 PF07995 Glucose / Sorbosone dehydrogenase FD428_RS14135 PF10799 Biofilm formation protein (YliH/bssR) FD428_RS14140 PF00919 Uncharacterized protein family UPF0004 FD428_RS14140 PF04055 Radical SAM superfamily FD428_RS14140 PF18693 TRAM domain FD428_RS14145 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14145 PF12911 N-terminal TM domain of oligopeptide transport permease C FD428_RS14150 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14155 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS14160 PF08352 Oligopeptide/dipeptide transporter, C-terminal region FD428_RS14160 PF00005 ABC transporter FD428_RS14165 PF01112 Asparaginase FD428_RS14170 PF03453 MoeA N-terminal region (domain I and II) FD428_RS14170 PF03454 MoeA C-terminal region (domain IV) FD428_RS14170 PF00994 Probable molybdopterin binding domain FD428_RS14175 PF00899 ThiF family FD428_RS14180 PF00923 Transaldolase/Fructose-6-phosphate aldolase FD428_RS14185 PF04055 Radical SAM superfamily FD428_RS14190 PF01228 Glycine radical FD428_RS14190 PF02901 Pyruvate formate lyase-like FD428_RS14205 PF07350 Protein of unknown function (DUF1479) FD428_RS14210 PF00356 Bacterial regulatory proteins, lacI family FD428_RS14215 PF07690 Major Facilitator Superfamily FD428_RS14220 PF13802 Galactose mutarotase-like FD428_RS14220 PF16338 Domain of unknown function (DUF4968) FD428_RS14220 PF17137 Domain of unknown function (DUF5110) FD428_RS14220 PF01055 Glycosyl hydrolases family 31 FD428_RS14230 PF00005 ABC transporter FD428_RS14230 PF12848 ABC transporter FD428_RS14235 PF17969 L,D-transpeptidase C-terminal domain FD428_RS14235 PF03734 L,D-transpeptidase catalytic domain FD428_RS14240 PF03600 Citrate transporter FD428_RS14245 PF02742 Iron dependent repressor, metal binding and dimerisation domain FD428_RS14245 PF01325 Iron dependent repressor, N-terminal DNA binding domain FD428_RS14255 PF00884 Sulfatase FD428_RS14260 PF13505 Outer membrane protein beta-barrel domain FD428_RS14265 PF00892 EamA-like transporter family FD428_RS14270 PF00210 Ferritin-like domain FD428_RS14275 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS14280 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14285 PF00005 ABC transporter FD428_RS14290 PF00924 Mechanosensitive ion channel FD428_RS14295 PF05971 RNA methyltransferase FD428_RS14300 PF07338 Protein of unknown function (DUF1471) FD428_RS14305 PF01258 Prokaryotic dksA/traR C4-type zinc finger FD428_RS14310 PF07338 Protein of unknown function (DUF1471) FD428_RS14315 PF02885 Glycosyl transferase family, helical bundle domain FD428_RS14325 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS14325 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS14330 PF13953 PapC C-terminal domain FD428_RS14330 PF13954 PapC N-terminal domain FD428_RS14330 PF00577 Outer membrane usher protein FD428_RS14345 PF13307 Helicase C-terminal domain FD428_RS14345 PF06733 DEAD_2 FD428_RS14350 PF00271 Helicase conserved C-terminal domain FD428_RS14350 PF00270 DEAD/DEAH box helicase FD428_RS14355 PF09209 Tetracyclin repressor-like, C-terminal domain FD428_RS14355 PF00440 Bacterial regulatory proteins, tetR family FD428_RS14360 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS14365 PF00005 ABC transporter FD428_RS14380 PF11076 Putative inner membrane protein YbhQ FD428_RS14385 PF03372 Endonuclease/Exonuclease/phosphatase family FD428_RS14390 PF13091 PLD-like domain FD428_RS14395 PF03706 Lysylphosphatidylglycerol synthase TM region FD428_RS14400 PF01027 Inhibitor of apoptosis-promoting Bax1 FD428_RS14405 PF02391 MoaE protein FD428_RS14410 PF02597 ThiS family FD428_RS14415 PF01967 MoaC family FD428_RS14420 PF00994 Probable molybdopterin binding domain FD428_RS14425 PF06463 Molybdenum Cofactor Synthesis C FD428_RS14425 PF04055 Radical SAM superfamily FD428_RS14430 PF01933 Uncharacterised protein family UPF0052 FD428_RS14435 PF17757 UvrB interaction domain FD428_RS14435 PF12344 Ultra-violet resistance protein B FD428_RS14435 PF02151 UvrB/uvrC motif FD428_RS14435 PF04851 Type III restriction enzyme, res subunit FD428_RS14435 PF00271 Helicase conserved C-terminal domain FD428_RS14445 PF08241 Methyltransferase domain FD428_RS14450 PF00155 Aminotransferase class I and II FD428_RS14455 PF06968 Biotin and Thiamin Synthesis associated domain FD428_RS14455 PF04055 Radical SAM superfamily FD428_RS14460 PF00202 Aminotransferase class-III FD428_RS14465 PF01161 Phosphatidylethanolamine-binding protein FD428_RS14470 PF00221 Aromatic amino acid lyase FD428_RS14475 PF17391 Urocanase N-terminal domain FD428_RS14475 PF01175 Urocanase Rossmann-like domain FD428_RS14475 PF17392 Urocanase C-terminal domain FD428_RS14480 PF07702 UTRA domain FD428_RS14480 PF00392 Bacterial regulatory proteins, gntR family FD428_RS14485 PF00491 Arginase family FD428_RS14490 PF01979 Amidohydrolase family FD428_RS14495 PF01095 Pectinesterase FD428_RS14500 PF00330 Aconitase family (aconitate hydratase) FD428_RS14500 PF00694 Aconitase C-terminal domain FD428_RS14505 PF00939 Sodium:sulfate symporter transmembrane region FD428_RS14510 PF04303 PrpF protein FD428_RS14515 PF03466 LysR substrate binding domain FD428_RS14515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS14520 PF10282 Lactonase, 7-bladed beta-propeller FD428_RS14530 PF00005 ABC transporter FD428_RS14530 PF03459 TOBE domain FD428_RS14535 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS14545 PF10766 Multidrug efflux pump-associated protein AcrZ FD428_RS14550 PF03459 TOBE domain FD428_RS14550 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS14555 PF00005 ABC transporter FD428_RS14560 PF16363 GDP-mannose 4,6 dehydratase FD428_RS14565 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain FD428_RS14565 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain FD428_RS14570 PF10509 Galactokinase galactose-binding signature FD428_RS14570 PF00288 GHMP kinases N terminal domain FD428_RS14570 PF08544 GHMP kinases C terminal FD428_RS14575 PF01263 Aldose 1-epimerase FD428_RS14580 PF00300 Histidine phosphatase superfamily (branch 1) FD428_RS14590 PF00005 ABC transporter FD428_RS14595 PF01032 FecCD transport family FD428_RS14605 PF07715 TonB-dependent Receptor Plug Domain FD428_RS14605 PF00593 TonB dependent receptor FD428_RS14610 PF00793 DAHP synthetase I family FD428_RS14615 PF13985 YbgS-like protein FD428_RS14620 PF01545 Cation efflux family FD428_RS14625 PF04973 Nicotinamide mononucleotide transporter FD428_RS14630 PF02445 Quinolinate synthetase A protein FD428_RS14660 PF16331 TolA binding protein trimerisation FD428_RS14660 PF13174 Tetratricopeptide repeat FD428_RS14665 PF00691 OmpA family FD428_RS14670 PF04052 TolB amino-terminal domain FD428_RS14670 PF07676 WD40-like Beta Propeller Repeat FD428_RS14675 PF06519 TolA C-terminal FD428_RS14680 PF02472 Biopolymer transport protein ExbD/TolR FD428_RS14685 PF01618 MotA/TolQ/ExbB proton channel family FD428_RS14690 PF03061 Thioesterase superfamily FD428_RS14695 PF09600 Cyd operon protein YbgE (Cyd_oper_YbgE) FD428_RS14700 PF08173 Membrane bound YbgT-like protein FD428_RS14705 PF02322 Cytochrome bd terminal oxidase subunit II FD428_RS14710 PF01654 Cytochrome bd terminal oxidase subunit I FD428_RS14715 PF09261 Alpha mannosidase middle domain FD428_RS14715 PF07748 Glycosyl hydrolases family 38 C-terminal domain FD428_RS14715 PF01074 Glycosyl hydrolases family 38 N-terminal domain FD428_RS14720 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS14720 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS14720 PF02378 Phosphotransferase system, EIIC FD428_RS14725 PF00392 Bacterial regulatory proteins, gntR family FD428_RS14725 PF07702 UTRA domain FD428_RS14730 PF02310 B12 binding domain FD428_RS14735 PF13941 MutL protein FD428_RS14740 PF06368 Methylaspartate mutase E chain (MutE) FD428_RS14745 PF05034 Methylaspartate ammonia-lyase N-terminus FD428_RS14745 PF07476 Methylaspartate ammonia-lyase C-terminus FD428_RS14760 PF00375 Sodium:dicarboxylate symporter family FD428_RS14765 PF05683 Fumarase C-terminus FD428_RS14765 PF05681 Fumarate hydratase (Fumerase) FD428_RS14770 PF02572 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP FD428_RS14775 PF03466 LysR substrate binding domain FD428_RS14775 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS14780 PF00549 CoA-ligase FD428_RS14780 PF02629 CoA binding domain FD428_RS14785 PF08442 ATP-grasp domain FD428_RS14785 PF00549 CoA-ligase FD428_RS14790 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FD428_RS14790 PF00364 Biotin-requiring enzyme FD428_RS14790 PF02817 e3 binding domain FD428_RS14795 PF16078 2-oxoglutarate dehydrogenase N-terminus FD428_RS14795 PF00676 Dehydrogenase E1 component FD428_RS14795 PF02779 Transketolase, pyrimidine binding domain FD428_RS14795 PF16870 2-oxoglutarate dehydrogenase C-terminal FD428_RS14800 PF13085 2Fe-2S iron-sulfur cluster binding domain FD428_RS14805 PF02910 Fumarate reductase flavoprotein C-term FD428_RS14805 PF00890 FAD binding domain FD428_RS14810 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FD428_RS14815 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit FD428_RS14820 PF00285 Citrate synthase, C-terminal domain FD428_RS14825 PF05145 Transition state regulatory protein AbrB FD428_RS14835 PF07470 Glycosyl Hydrolase Family 88 FD428_RS14840 PF01306 LacY proton/sugar symporter FD428_RS14850 PF12833 Helix-turn-helix domain FD428_RS14850 PF02311 AraC-like ligand binding domain FD428_RS14855 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain FD428_RS14855 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain FD428_RS14855 PF06827 Zinc finger found in FPG and IleRS FD428_RS14860 PF01470 Pyroglutamyl peptidase FD428_RS14875 PF03746 LamB/YcsF family FD428_RS14880 PF02626 Carboxyltransferase domain, subdomain A and B FD428_RS14885 PF02682 Carboxyltransferase domain, subdomain C and D FD428_RS14890 PF01784 NIF3 (NGG1p interacting factor 3) FD428_RS14895 PF00854 POT family FD428_RS14900 PF10725 Protein of unknown function (DUF2517) FD428_RS14905 PF09604 F subunit of K+-transporting ATPase (Potass_KdpF) FD428_RS14910 PF03814 Potassium-transporting ATPase A subunit FD428_RS14920 PF02669 K+-transporting ATPase, c chain FD428_RS14925 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS14925 PF13492 GAF domain FD428_RS14925 PF13493 Domain of unknown function (DUF4118) FD428_RS14925 PF02702 Osmosensitive K+ channel His kinase sensor domain FD428_RS14925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS14930 PF00072 Response regulator receiver domain FD428_RS14930 PF00486 Transcriptional regulatory protein, C terminal FD428_RS14945 PF01276 Orn/Lys/Arg decarboxylase, major domain FD428_RS14945 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FD428_RS14945 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FD428_RS14950 PF13520 Amino acid permease FD428_RS14955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I FD428_RS14955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II FD428_RS14955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain FD428_RS14955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III FD428_RS14960 PF17206 SeqA protein N-terminal domain FD428_RS14960 PF03925 SeqA protein C-terminal domain FD428_RS14965 PF12697 Alpha/beta hydrolase family FD428_RS14970 PF01402 Ribbon-helix-helix protein, copG family FD428_RS14975 PF00258 Flavodoxin FD428_RS14985 PF01475 Ferric uptake regulator family FD428_RS14990 PF13982 YbfN-like lipoprotein FD428_RS14995 PF03573 outer membrane porin, OprD family FD428_RS15000 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain FD428_RS15000 PF00749 tRNA synthetases class I (E and Q), catalytic domain FD428_RS15005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 FD428_RS15005 PF00367 phosphotransferase system, EIIB FD428_RS15005 PF02378 Phosphotransferase system, EIIC FD428_RS15010 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase FD428_RS15015 PF01979 Amidohydrolase family FD428_RS15020 PF01047 MarR family FD428_RS15020 PF00480 ROK family FD428_RS15025 PF13344 Haloacid dehalogenase-like hydrolase FD428_RS15030 PF00733 Asparagine synthase FD428_RS15030 PF13537 Glutamine amidotransferase domain FD428_RS15070 PF01494 FAD binding domain FD428_RS15075 PF00919 Uncharacterized protein family UPF0004 FD428_RS15075 PF01938 TRAM domain FD428_RS15075 PF04055 Radical SAM superfamily FD428_RS15080 PF02562 PhoH-like protein FD428_RS15085 PF02130 Uncharacterized protein family UPF0054 FD428_RS15090 PF03471 Transporter associated domain FD428_RS15090 PF00571 CBS domain FD428_RS15095 PF00795 Carbon-nitrogen hydrolase FD428_RS15100 PF00497 Bacterial extracellular solute-binding proteins, family 3 FD428_RS15105 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS15110 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS15115 PF00005 ABC transporter FD428_RS15120 PF01156 Inosine-uridine preferring nucleoside hydrolase FD428_RS15125 PF07295 Zinc-ribbon containing domain FD428_RS15130 PF13603 Leucyl-tRNA synthetase, Domain 2 FD428_RS15130 PF08264 Anticodon-binding domain of tRNA FD428_RS15130 PF00133 tRNA synthetases class I (I, L, M and V) FD428_RS15135 PF04390 Lipopolysaccharide-assembly FD428_RS15140 PF06144 DNA polymerase III, delta subunit FD428_RS15140 PF14840 Processivity clamp loader gamma complex DNA pol III C-term FD428_RS15145 PF01467 Cytidylyltransferase-like FD428_RS15150 PF00155 Aminotransferase class I and II FD428_RS15155 PF00300 Histidine phosphatase superfamily (branch 1) FD428_RS15165 PF02590 Predicted SPOUT methyltransferase FD428_RS15170 PF00905 Penicillin binding protein transpeptidase domain FD428_RS15170 PF03717 Penicillin-binding Protein dimerisation domain FD428_RS15175 PF01098 Cell cycle protein FD428_RS15180 PF05036 Sporulation related domain FD428_RS15180 PF03330 Lytic transglycolase FD428_RS15185 PF07943 Penicillin-binding protein 5, C-terminal domain FD428_RS15185 PF00768 D-alanyl-D-alanine carboxypeptidase FD428_RS15190 PF04359 Protein of unknown function (DUF493) FD428_RS15195 PF03099 Biotin/lipoate A/B protein ligase family FD428_RS15200 PF03466 LysR substrate binding domain FD428_RS15200 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS15205 PF16881 N-terminal domain of lipoyl synthase of Radical_SAM family FD428_RS15205 PF04055 Radical SAM superfamily FD428_RS15210 PF02416 mttA/Hcf106 family FD428_RS15215 PF00795 Carbon-nitrogen hydrolase FD428_RS15220 PF02537 CrcB-like protein, Camphor Resistance (CrcB) FD428_RS15225 PF00313 'Cold-shock' DNA-binding domain FD428_RS15230 PF07017 Antimicrobial peptide resistance and lipid A acylation protein PagP FD428_RS15235 PF03606 C4-dicarboxylate anaerobic carrier FD428_RS15240 PF00072 Response regulator receiver domain FD428_RS15240 PF12431 Transcriptional regulator FD428_RS15245 PF17203 Single cache domain 3 FD428_RS15245 PF00989 PAS fold FD428_RS15245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS15245 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FD428_RS15255 PF06857 Malonate decarboxylase delta subunit (MdcD) FD428_RS15260 PF03328 HpcH/HpaI aldolase/citrate lyase family FD428_RS15265 PF04223 Citrate lyase, alpha subunit (CitF) FD428_RS15270 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase FD428_RS15275 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase FD428_RS15280 PF00939 Sodium:sulfate symporter transmembrane region FD428_RS15285 PF00445 Ribonuclease T2 family FD428_RS15290 PF14760 Rnk N-terminus FD428_RS15290 PF01272 Transcription elongation factor, GreA/GreB, C-term FD428_RS15295 PF00582 Universal stress protein family FD428_RS15300 PF13192 Thioredoxin domain FD428_RS15300 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS15305 PF10417 C-terminal domain of 1-Cys peroxiredoxin FD428_RS15305 PF00578 AhpC/TSA family FD428_RS15310 PF13098 Thioredoxin-like domain FD428_RS15315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS15315 PF03466 LysR substrate binding domain FD428_RS15320 PF11922 Domain of unknown function (DUF3440) FD428_RS15320 PF01507 Phosphoadenosine phosphosulfate reductase family FD428_RS15325 PF02195 ParB-like nuclease domain FD428_RS15330 PF00155 Aminotransferase class I and II FD428_RS15335 PF00465 Iron-containing alcohol dehydrogenase FD428_RS15340 PF04328 Selenoprotein, putative FD428_RS15345 PF13722 5TM C-terminal transporter carbon starvation CstA FD428_RS15345 PF02554 Carbon starvation protein CstA FD428_RS15350 PF03061 Thioesterase superfamily FD428_RS15360 PF00857 Isochorismatase family FD428_RS15360 PF00550 Phosphopantetheine attachment site FD428_RS15365 PF13193 AMP-binding enzyme C-terminal domain FD428_RS15365 PF00501 AMP-binding enzyme FD428_RS15370 PF00425 chorismate binding enzyme FD428_RS15375 PF01497 Periplasmic binding protein FD428_RS15380 PF05977 Transmembrane secretion effector FD428_RS15385 PF01032 FecCD transport family FD428_RS15390 PF01032 FecCD transport family FD428_RS15395 PF00005 ABC transporter FD428_RS15400 PF02706 Chain length determinant protein FD428_RS15405 PF00975 Thioesterase domain FD428_RS15405 PF00550 Phosphopantetheine attachment site FD428_RS15405 PF00668 Condensation domain FD428_RS15405 PF13193 AMP-binding enzyme C-terminal domain FD428_RS15405 PF00501 AMP-binding enzyme FD428_RS15410 PF03621 MbtH-like protein FD428_RS15415 PF00756 Putative esterase FD428_RS15415 PF11806 Domain of unknown function (DUF3327) FD428_RS15420 PF07715 TonB-dependent Receptor Plug Domain FD428_RS15420 PF00593 TonB dependent receptor FD428_RS15425 PF01648 4'-phosphopantetheinyl transferase superfamily FD428_RS15425 PF17837 4'-phosphopantetheinyl transferase N-terminal domain FD428_RS15430 PF02028 BCCT, betaine/carnitine/choline family transporter FD428_RS15435 PF00440 Bacterial regulatory proteins, tetR family FD428_RS15435 PF13977 BetI-type transcriptional repressor, C-terminal FD428_RS15440 PF00171 Aldehyde dehydrogenase family FD428_RS15445 PF00732 GMC oxidoreductase FD428_RS15445 PF05199 GMC oxidoreductase FD428_RS15450 PF04107 Glutamate-cysteine ligase family 2(GCS2) FD428_RS15455 PF06643 Protein of unknown function (DUF1158) FD428_RS15465 PF00593 TonB dependent receptor FD428_RS15465 PF07715 TonB-dependent Receptor Plug Domain FD428_RS15470 PF12833 Helix-turn-helix domain FD428_RS15475 PF12706 Beta-lactamase superfamily domain FD428_RS15480 PF00440 Bacterial regulatory proteins, tetR family FD428_RS15480 PF16295 Tetracyclin repressor-like, C-terminal domain FD428_RS15485 PF04237 YjbR FD428_RS15490 PF00881 Nitroreductase family FD428_RS15500 PF07690 Major Facilitator Superfamily FD428_RS15505 PF00924 Mechanosensitive ion channel FD428_RS15510 PF00356 Bacterial regulatory proteins, lacI family FD428_RS15525 PF03825 Nucleoside H+ symporter FD428_RS15530 PF00324 Amino acid permease FD428_RS15550 PF00873 AcrB/AcrD/AcrF family FD428_RS15555 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS15555 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS15560 PF11604 Copper binding periplasmic protein CusF FD428_RS15565 PF02321 Outer membrane efflux protein FD428_RS15570 PF00072 Response regulator receiver domain FD428_RS15570 PF00486 Transcriptional regulatory protein, C terminal FD428_RS15575 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS15575 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS15575 PF00672 HAMP domain FD428_RS15590 PF00196 Bacterial regulatory proteins, luxR family FD428_RS15605 PF00072 Response regulator receiver domain FD428_RS15605 PF00196 Bacterial regulatory proteins, luxR family FD428_RS15610 PF00419 Fimbrial protein FD428_RS15615 PF00419 Fimbrial protein FD428_RS15620 PF00577 Outer membrane usher protein FD428_RS15620 PF13954 PapC N-terminal domain FD428_RS15620 PF13953 PapC C-terminal domain FD428_RS15625 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS15625 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS15635 PF00419 Fimbrial protein FD428_RS15640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain FD428_RS15640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain FD428_RS15650 PF01406 tRNA synthetases class I (C) catalytic domain FD428_RS15650 PF09190 DALR domain FD428_RS15655 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD FD428_RS15660 PF12850 Calcineurin-like phosphoesterase superfamily domain FD428_RS15665 PF00731 AIR carboxylase FD428_RS15670 PF02222 ATP-grasp domain FD428_RS15670 PF17769 Phosphoribosylaminoimidazole carboxylase C-terminal domain FD428_RS15680 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS15685 PF00005 ABC transporter FD428_RS15685 PF09383 NIL domain FD428_RS15690 PF03180 NLPA lipoprotein FD428_RS15695 PF00267 Gram-negative porin FD428_RS15705 PF00005 ABC transporter FD428_RS15710 PF13472 GDSL-like Lipase/Acylhydrolase family FD428_RS15715 PF00106 short chain dehydrogenase FD428_RS15720 PF00085 Thioredoxin FD428_RS15725 PF03649 Uncharacterised protein family (UPF0014) FD428_RS15730 PF00005 ABC transporter FD428_RS15735 PF16200 C-terminal region of band_7 FD428_RS15735 PF01145 SPFH domain / Band 7 family FD428_RS15740 PF01957 NfeD-like C-terminal, partner-binding FD428_RS15745 PF13411 MerR HTH family regulatory protein FD428_RS15750 PF07715 TonB-dependent Receptor Plug Domain FD428_RS15755 PF01497 Periplasmic binding protein FD428_RS15760 PF04055 Radical SAM superfamily FD428_RS15765 PF06228 Haem utilisation ChuX/HutX FD428_RS15775 PF01032 FecCD transport family FD428_RS15780 PF00005 ABC transporter FD428_RS15785 PF00083 Sugar (and other) transporter FD428_RS15785 PF07690 Major Facilitator Superfamily FD428_RS15790 PF00356 Bacterial regulatory proteins, lacI family FD428_RS15795 PF01156 Inosine-uridine preferring nucleoside hydrolase FD428_RS15800 PF02308 MgtC family FD428_RS15805 PF00403 Heavy-metal-associated domain FD428_RS15810 PF01963 TraB family FD428_RS15815 PF04073 Aminoacyl-tRNA editing domain FD428_RS15820 PF00149 Calcineurin-like phosphoesterase FD428_RS15820 PF02872 5'-nucleotidase, C-terminal domain FD428_RS15825 PF07690 Major Facilitator Superfamily FD428_RS15830 PF00999 Sodium/hydrogen exchanger family FD428_RS15830 PF02254 TrkA-N domain FD428_RS15840 PF00294 pfkB family carbohydrate kinase FD428_RS15845 PF07859 alpha/beta hydrolase fold FD428_RS15850 PF00762 Ferrochelatase FD428_RS15855 PF05191 Adenylate kinase, active site lid FD428_RS15860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS15860 PF00183 Hsp90 protein FD428_RS15865 PF02132 RecR protein FD428_RS15865 PF13662 Toprim domain FD428_RS15870 PF02575 YbaB/EbfC DNA-binding family FD428_RS15875 PF12170 DNA polymerase III tau subunit V interacting with alpha FD428_RS15875 PF12169 DNA polymerase III subunits gamma and tau domain III FD428_RS15875 PF12168 DNA polymerase III subunits tau domain IV DnaB-binding FD428_RS15880 PF00156 Phosphoribosyl transferase domain FD428_RS15885 PF04304 Protein of unknown function (DUF454) FD428_RS15890 PF07445 Primosomal replication protein priC FD428_RS15895 PF10689 Protein of unknown function (DUF2496) FD428_RS15900 PF04754 Putative transposase, YhgA-like FD428_RS15905 PF00924 Mechanosensitive ion channel FD428_RS15905 PF12795 Mechanosensitive ion channel porin domain FD428_RS15905 PF12794 Mechanosensitive ion channel inner membrane domain 1 FD428_RS15910 PF00440 Bacterial regulatory proteins, tetR family FD428_RS15910 PF08361 MAATS-type transcriptional repressor, C-terminal region FD428_RS15915 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS15915 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS15920 PF00873 AcrB/AcrD/AcrF family FD428_RS15925 PF10757 Biofilm formation regulator YbaJ FD428_RS15930 PF05321 Haemolysin expression modulating protein FD428_RS15935 PF14602 Hexapeptide repeat of succinyl-transferase FD428_RS15935 PF12464 Maltose acetyltransferase FD428_RS15940 PF10777 Inner membrane protein YlaC FD428_RS15945 PF00444 Ribosomal protein L36 FD428_RS15950 PF01197 Ribosomal protein L31 FD428_RS15955 PF12792 CSS motif domain associated with EAL FD428_RS15955 PF00563 EAL domain FD428_RS15960 PF07237 Protein of unknown function (DUF1428) FD428_RS15970 PF00155 Aminotransferase class I and II FD428_RS15970 PF00392 Bacterial regulatory proteins, gntR family FD428_RS15990 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain FD428_RS15995 PF09619 Type III secretion system lipoprotein chaperone (YscW) FD428_RS16005 PF00909 Ammonium Transporter Family FD428_RS16010 PF00543 Nitrogen regulatory protein P-II FD428_RS16020 PF00005 ABC transporter FD428_RS16020 PF00664 ABC transporter transmembrane region FD428_RS16025 PF00005 ABC transporter FD428_RS16025 PF00664 ABC transporter transmembrane region FD428_RS16030 PF13404 AsnC-type helix-turn-helix domain FD428_RS16030 PF01037 Lrp/AsnC ligand binding domain FD428_RS16035 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS16045 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS16045 PF12793 Sugar transport-related sRNA regulator N-term FD428_RS16050 PF06508 Queuosine biosynthesis protein QueC FD428_RS16065 PF13145 PPIC-type PPIASE domain FD428_RS16070 PF00216 Bacterial DNA-binding protein FD428_RS16075 PF00004 ATPase family associated with various cellular activities (AAA) FD428_RS16075 PF02190 ATP-dependent protease La (LON) substrate-binding domain FD428_RS16075 PF05362 Lon protease (S16) C-terminal proteolytic domain FD428_RS16080 PF10431 C-terminal, D2-small domain, of ClpB protein FD428_RS16080 PF07724 AAA domain (Cdc48 subfamily) FD428_RS16080 PF06689 ClpX C4-type zinc finger FD428_RS16085 PF00574 Clp protease FD428_RS16090 PF05697 Bacterial trigger factor protein (TF) FD428_RS16090 PF05698 Bacterial trigger factor protein (TF) C-terminus FD428_RS16090 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD428_RS16100 PF01722 BolA-like protein FD428_RS16105 PF08139 Prokaryotic membrane lipoprotein lipid attachment site FD428_RS16105 PF03923 Uncharacterized lipoprotein FD428_RS16110 PF07690 Major Facilitator Superfamily FD428_RS16115 PF06481 COX Aromatic Rich Motif FD428_RS16115 PF00116 Cytochrome C oxidase subunit II, periplasmic domain FD428_RS16120 PF00115 Cytochrome C and Quinol oxidase polypeptide I FD428_RS16125 PF00510 Cytochrome c oxidase subunit III FD428_RS16130 PF03626 Prokaryotic Cytochrome C oxidase subunit IV FD428_RS16135 PF01040 UbiA prenyltransferase family FD428_RS16155 PF07690 Major Facilitator Superfamily FD428_RS16160 PF04461 Protein of unknown function (DUF520) FD428_RS16165 PF08546 Ketopantoate reductase PanE/ApbA C terminal FD428_RS16165 PF02558 Ketopantoate reductase PanE/ApbA FD428_RS16170 PF01965 DJ-1/PfpI family FD428_RS16175 PF02926 THUMP domain FD428_RS16175 PF02568 Thiamine biosynthesis protein (ThiI) FD428_RS16180 PF02609 Exonuclease VII small subunit FD428_RS16185 PF00348 Polyprenyl synthetase FD428_RS16190 PF02779 Transketolase, pyrimidine binding domain FD428_RS16190 PF02780 Transketolase, C-terminal domain FD428_RS16190 PF13292 1-deoxy-D-xylulose-5-phosphate synthase FD428_RS16195 PF00248 Aldo/keto reductase family FD428_RS16200 PF04608 Phosphatidylglycerophosphatase A FD428_RS16205 PF02769 AIR synthase related protein, C-terminal domain FD428_RS16205 PF00586 AIR synthase related protein, N-terminal domain FD428_RS16210 PF01029 NusB family FD428_RS16215 PF00885 6,7-dimethyl-8-ribityllumazine synthase FD428_RS16220 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region FD428_RS16220 PF01872 RibD C-terminal domain FD428_RS16225 PF03477 ATP cone domain FD428_RS16230 PF11622 Protein of unknown function (DUF3251) FD428_RS16235 PF03502 Nucleoside-specific channel-forming protein, Tsx FD428_RS16240 PF01844 HNH endonuclease FD428_RS16245 PF02355 Protein export membrane protein FD428_RS16245 PF07549 SecD/SecF GG Motif FD428_RS16250 PF07549 SecD/SecF GG Motif FD428_RS16250 PF13721 SecD export protein N-terminal TM region FD428_RS16250 PF02355 Protein export membrane protein FD428_RS16255 PF02699 Preprotein translocase subunit FD428_RS16260 PF01702 Queuine tRNA-ribosyltransferase FD428_RS16265 PF02547 Queuosine biosynthesis protein FD428_RS16270 PF04336 Acyl carrier protein phosphodiesterase FD428_RS16275 PF10417 C-terminal domain of 1-Cys peroxiredoxin FD428_RS16275 PF00578 AhpC/TSA family FD428_RS16290 PF03466 LysR substrate binding domain FD428_RS16290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS16295 PF00128 Alpha amylase, catalytic domain FD428_RS16295 PF02903 Alpha amylase, N-terminal ig-like domain FD428_RS16300 PF00324 Amino acid permease FD428_RS16305 PF05525 Branched-chain amino acid transport protein FD428_RS16310 PF00989 PAS fold FD428_RS16310 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS16310 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS16310 PF11808 Phosphate regulon sensor protein PhoR FD428_RS16315 PF00072 Response regulator receiver domain FD428_RS16315 PF00486 Transcriptional regulatory protein, C terminal FD428_RS16320 PF12320 Type 5 capsule protein repressor C-terminal domain FD428_RS16320 PF00149 Calcineurin-like phosphoesterase FD428_RS16325 PF13476 AAA domain FD428_RS16330 PF00480 ROK family FD428_RS16335 PF04381 Putative exonuclease, RdgC FD428_RS16340 PF06865 Pyrimidine/purine nucleoside phosphorylase FD428_RS16345 PF07302 AroM protein FD428_RS16350 PF16362 YaiA protein FD428_RS16355 PF01202 Shikimate kinase FD428_RS16360 PF02639 Uncharacterized BCR, YaiI/YqxD family COG1671 FD428_RS16365 PF03807 NADP oxidoreductase coenzyme F420-dependent FD428_RS16365 PF14748 Pyrroline-5-carboxylate reductase dimerisation FD428_RS16370 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS16370 PF05230 MASE2 domain FD428_RS16375 PF07769 psiF repeat FD428_RS16380 PF00245 Alkaline phosphatase FD428_RS16385 PF10796 Sigma-S stabilisation anti-adaptor protein FD428_RS16390 PF00356 Bacterial regulatory proteins, lacI family FD428_RS16395 PF07690 Major Facilitator Superfamily FD428_RS16400 PF00106 short chain dehydrogenase FD428_RS16405 PF00083 Sugar (and other) transporter FD428_RS16405 PF07690 Major Facilitator Superfamily FD428_RS16415 PF01820 D-ala D-ala ligase N-terminus FD428_RS16415 PF07478 D-ala D-ala ligase C-terminus FD428_RS16420 PF10953 Protein of unknown function (DUF2754) FD428_RS16425 PF10954 Protein of unknown function (DUF2755) FD428_RS16430 PF07759 Protein of unknown function (DUF1615) FD428_RS16435 PF05992 SbmA/BacA-like family FD428_RS16440 PF00144 Beta-lactamase FD428_RS16445 PF15977 Winged helix-turn-helix DNA binding FD428_RS16450 PF03797 Autotransporter beta-domain FD428_RS16455 PF00490 Delta-aminolevulinic acid dehydratase FD428_RS16465 PF02668 Taurine catabolism dioxygenase TauD, TfdA family FD428_RS16470 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS16475 PF00005 ABC transporter FD428_RS16480 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FD428_RS16485 PF00196 Bacterial regulatory proteins, luxR family FD428_RS16485 PF00072 Response regulator receiver domain FD428_RS16490 PF05231 MASE1 FD428_RS16490 PF07730 Histidine kinase FD428_RS16490 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS16495 PF07690 Major Facilitator Superfamily FD428_RS16505 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS16510 PF08402 TOBE domain FD428_RS16510 PF00005 ABC transporter FD428_RS16515 PF02574 Homocysteine S-methyltransferase FD428_RS16520 PF00356 Bacterial regulatory proteins, lacI family FD428_RS16525 PF02837 Glycosyl hydrolases family 2, sugar binding domain FD428_RS16525 PF02836 Glycosyl hydrolases family 2, TIM barrel domain FD428_RS16525 PF00703 Glycosyl hydrolases family 2 FD428_RS16525 PF02929 Beta galactosidase small chain FD428_RS16525 PF16353 Domain of unknown function(DUF4981) FD428_RS16530 PF13193 AMP-binding enzyme C-terminal domain FD428_RS16530 PF16177 Acetyl-coenzyme A synthetase N-terminus FD428_RS16530 PF00501 AMP-binding enzyme FD428_RS16535 PF03972 MmgE/PrpD family FD428_RS16540 PF00285 Citrate synthase, C-terminal domain FD428_RS16550 PF02954 Bacterial regulatory protein, Fis family FD428_RS16550 PF06506 Propionate catabolism activator FD428_RS16550 PF00158 Sigma-54 interaction domain FD428_RS16555 PF07338 Protein of unknown function (DUF1471) FD428_RS16560 PF01810 LysE type translocator FD428_RS16565 PF07690 Major Facilitator Superfamily FD428_RS16570 PF02321 Outer membrane efflux protein FD428_RS16575 PF00873 AcrB/AcrD/AcrF family FD428_RS16580 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS16580 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS16585 PF00440 Bacterial regulatory proteins, tetR family FD428_RS16585 PF17932 Tetracyclin repressor-like, C-terminal domain FD428_RS16590 PF01418 Helix-turn-helix domain, rpiR family FD428_RS16590 PF01380 SIS domain FD428_RS16600 PF01032 FecCD transport family FD428_RS16605 PF01032 FecCD transport family FD428_RS16610 PF00005 ABC transporter FD428_RS16615 PF07715 TonB-dependent Receptor Plug Domain FD428_RS16625 PF01212 Beta-eliminating lyase FD428_RS16630 PF03222 Tryptophan/tyrosine permease family FD428_RS16640 PF06406 StbA protein FD428_RS16645 PF00877 NlpC/P60 family FD428_RS16650 PF00691 OmpA family FD428_RS16650 PF13677 Membrane MotB of proton-channel complex MotA/MotB FD428_RS16655 PF01618 MotA/TolQ/ExbB proton channel family FD428_RS16660 PF04542 Sigma-70 region 2 FD428_RS16660 PF04545 Sigma-70, region 4 FD428_RS16685 PF07196 Flagellin hook IN motif FD428_RS16685 PF07195 Flagellar hook-associated protein 2 C-terminus FD428_RS16685 PF02465 Flagellar hook-associated protein 2 N-terminus FD428_RS16690 PF00669 Bacterial flagellin N-terminal helical region FD428_RS16690 PF00700 Bacterial flagellin C-terminal helical region FD428_RS16695 PF00669 Bacterial flagellin N-terminal helical region FD428_RS16695 PF00700 Bacterial flagellin C-terminal helical region FD428_RS16720 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS16720 PF00460 Flagella basal body rod protein FD428_RS16730 PF02119 Flagellar P-ring protein FD428_RS16735 PF02107 Flagellar L-ring protein FD428_RS16740 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS16740 PF00460 Flagella basal body rod protein FD428_RS16745 PF00460 Flagella basal body rod protein FD428_RS16745 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS16750 PF07559 Flagellar basal body protein FlaE FD428_RS16750 PF00460 Flagella basal body rod protein FD428_RS16750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS16760 PF00460 Flagella basal body rod protein FD428_RS16760 PF06429 Flagellar basal body rod FlgEFG protein C-terminal FD428_RS16765 PF00460 Flagella basal body rod protein FD428_RS16785 PF01209 ubiE/COQ5 methyltransferase family FD428_RS16790 PF01501 Glycosyl transferase family 8 FD428_RS16790 PF00535 Glycosyl transferase family 2 FD428_RS16815 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD428_RS16815 PF18269 T3SS EscN ATPase C-terminal domain FD428_RS16825 PF01706 FliG C-terminal domain FD428_RS16825 PF14841 FliG middle domain FD428_RS16825 PF14842 FliG N-terminal domain FD428_RS16830 PF01514 Secretory protein of YscJ/FliF family FD428_RS16830 PF08345 Flagellar M-ring protein C-terminal FD428_RS16835 PF02049 Flagellar hook-basal body complex protein FliE FD428_RS16840 PF02954 Bacterial regulatory protein, Fis family FD428_RS16840 PF00072 Response regulator receiver domain FD428_RS16840 PF00158 Sigma-54 interaction domain FD428_RS16850 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term FD428_RS16855 PF00813 FliP family FD428_RS16860 PF01313 Bacterial export proteins, family 3 FD428_RS16865 PF01311 Bacterial export proteins, family 1 FD428_RS16870 PF01312 FlhB HrpN YscU SpaS Family FD428_RS16875 PF00771 FHIPEP family FD428_RS16890 PF12792 CSS motif domain associated with EAL FD428_RS16890 PF00563 EAL domain FD428_RS16910 PF02311 AraC-like ligand binding domain FD428_RS16910 PF12833 Helix-turn-helix domain FD428_RS16925 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS16925 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS16930 PF00577 Outer membrane usher protein FD428_RS16930 PF13953 PapC C-terminal domain FD428_RS16930 PF13954 PapC N-terminal domain FD428_RS16960 PF04069 Substrate binding domain of ABC-type glycine betaine transport system FD428_RS16965 PF00221 Aromatic amino acid lyase FD428_RS16970 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS16975 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS16980 PF00005 ABC transporter FD428_RS16980 PF00571 CBS domain FD428_RS16985 PF02423 Ornithine cyclodeaminase/mu-crystallin family FD428_RS16995 PF03466 LysR substrate binding domain FD428_RS16995 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS17000 PF02653 Branched-chain amino acid transport system / permease component FD428_RS17005 PF11862 Domain of unknown function (DUF3382) FD428_RS17005 PF02653 Branched-chain amino acid transport system / permease component FD428_RS17010 PF00005 ABC transporter FD428_RS17010 PF12399 Branched-chain amino acid ATP-binding cassette transporter FD428_RS17015 PF00005 ABC transporter FD428_RS17020 PF13458 Periplasmic binding protein FD428_RS17030 PF01546 Peptidase family M20/M25/M40 FD428_RS17030 PF07687 Peptidase dimerisation domain FD428_RS17040 PF08267 Cobalamin-independent synthase, N-terminal domain FD428_RS17040 PF01717 Cobalamin-independent synthase, Catalytic domain FD428_RS17050 PF01043 SecA preprotein cross-linking domain FD428_RS17050 PF07517 SecA DEAD-like domain FD428_RS17050 PF02810 SEC-C motif FD428_RS17050 PF07516 SecA Wing and Scaffold domain FD428_RS17100 PF13356 Arm DNA-binding domain FD428_RS17100 PF14659 Phage integrase, N-terminal SAM-like domain FD428_RS17100 PF00589 Phage integrase family FD428_RS17110 PF00171 Aldehyde dehydrogenase family FD428_RS17115 PF00696 Amino acid kinase family FD428_RS17115 PF01472 PUA domain FD428_RS17120 PF00267 Gram-negative porin FD428_RS17130 PF06500 Alpha/beta hydrolase of unknown function (DUF1100) FD428_RS17135 PF00156 Phosphoribosyl transferase domain FD428_RS17140 PF01546 Peptidase family M20/M25/M40 FD428_RS17140 PF07687 Peptidase dimerisation domain FD428_RS17145 PF11799 impB/mucB/samB family C-terminal domain FD428_RS17145 PF00817 impB/mucB/samB family FD428_RS17145 PF11798 IMS family HHH motif FD428_RS17150 PF03734 L,D-transpeptidase catalytic domain FD428_RS17155 PF13230 Glutamine amidotransferases class-II FD428_RS17160 PF13580 SIS domain FD428_RS17165 PF09317 Domain of unknown function (DUF1974) FD428_RS17165 PF02770 Acyl-CoA dehydrogenase, middle domain FD428_RS17165 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD428_RS17165 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD428_RS17170 PF00795 Carbon-nitrogen hydrolase FD428_RS17180 PF00929 Exonuclease FD428_RS17185 PF00075 RNase H FD428_RS17190 PF08241 Methyltransferase domain FD428_RS17195 PF16123 Hydroxyacylglutathione hydrolase C-terminus FD428_RS17195 PF00753 Metallo-beta-lactamase superfamily FD428_RS17200 PF01476 LysM domain FD428_RS17200 PF01464 Transglycosylase SLT domain FD428_RS17205 PF08241 Methyltransferase domain FD428_RS17210 PF03372 Endonuclease/Exonuclease/phosphatase family FD428_RS17215 PF03466 LysR substrate binding domain FD428_RS17215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS17220 PF00248 Aldo/keto reductase family FD428_RS17255 PF00005 ABC transporter FD428_RS17255 PF09383 NIL domain FD428_RS17260 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS17265 PF03180 NLPA lipoprotein FD428_RS17270 PF16358 RcsF lipoprotein FD428_RS17275 PF18389 TrmO C-terminal domain FD428_RS17275 PF01980 tRNA-methyltransferase O FD428_RS17280 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) FD428_RS17280 PF04073 Aminoacyl-tRNA editing domain FD428_RS17280 PF03129 Anticodon binding domain FD428_RS17285 PF17185 NlpE C-terminal OB domain FD428_RS17285 PF04170 NlpE N-terminal domain FD428_RS17290 PF00472 RF-1 domain FD428_RS17295 PF07152 YaeQ protein FD428_RS17300 PF06786 Uncharacterised protein family (UPF0253) FD428_RS17305 PF07073 Modulator of Rho-dependent transcription termination (ROF) FD428_RS17310 PF11734 TilS substrate C-terminal domain FD428_RS17310 PF01171 PP-loop family FD428_RS17310 PF09179 TilS substrate binding domain FD428_RS17315 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily FD428_RS17320 PF01276 Orn/Lys/Arg decarboxylase, major domain FD428_RS17320 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain FD428_RS17320 PF03709 Orn/Lys/Arg decarboxylase, N-terminal domain FD428_RS17325 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit FD428_RS17330 PF07733 Bacterial DNA polymerase III alpha NTPase domain FD428_RS17330 PF17657 Bacterial DNA polymerase III alpha subunit finger domain FD428_RS17330 PF14579 Helix-hairpin-helix motif FD428_RS17330 PF02811 PHP domain FD428_RS17330 PF01336 OB-fold nucleic acid binding domain FD428_RS17335 PF01351 Ribonuclease HII FD428_RS17340 PF02684 Lipid-A-disaccharide synthetase FD428_RS17345 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS17345 PF13720 Udp N-acetylglucosamine O-acyltransferase; Domain 2 FD428_RS17350 PF07977 FabA-like domain FD428_RS17355 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS17355 PF04613 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, LpxD FD428_RS17360 PF03938 Outer membrane protein (OmpH-like) FD428_RS17365 PF07244 Surface antigen variable number repeat FD428_RS17365 PF01103 Surface antigen FD428_RS17370 PF17820 PDZ domain FD428_RS17370 PF02163 Peptidase family M50 FD428_RS17380 PF01255 Putative undecaprenyl diphosphate synthase FD428_RS17385 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase FD428_RS17385 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain FD428_RS17385 PF13288 DXP reductoisomerase C-terminal domain FD428_RS17390 PF01765 Ribosome recycling factor FD428_RS17395 PF00696 Amino acid kinase family FD428_RS17400 PF00889 Elongation factor TS FD428_RS17405 PF00318 Ribosomal protein S2 FD428_RS17410 PF00557 Metallopeptidase family M24 FD428_RS17415 PF01842 ACT domain FD428_RS17415 PF08335 GlnD PII-uridylyltransferase FD428_RS17415 PF01966 HD domain FD428_RS17415 PF01909 Nucleotidyltransferase domain FD428_RS17420 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS17420 PF14805 Tetrahydrodipicolinate N-succinyltransferase N-terminal FD428_RS17420 PF14602 Hexapeptide repeat of succinyl-transferase FD428_RS17425 PF11944 Protein of unknown function (DUF3461) FD428_RS17430 PF17853 GGDEF-like domain FD428_RS17430 PF05651 Putative sugar diacid recognition FD428_RS17430 PF13556 PucR C-terminal helix-turn-helix domain FD428_RS17435 PF00595 PDZ domain FD428_RS17440 PF13286 Phosphohydrolase-associated domain FD428_RS17440 PF01966 HD domain FD428_RS17445 PF01048 Phosphorylase superfamily FD428_RS17450 PF01497 Periplasmic binding protein FD428_RS17455 PF03458 UPF0126 domain FD428_RS17460 PF01521 Iron-sulphur cluster biosynthesis FD428_RS17465 PF00654 Voltage gated chloride channel FD428_RS17470 PF00202 Aminotransferase class-III FD428_RS17475 PF01032 FecCD transport family FD428_RS17480 PF01497 Periplasmic binding protein FD428_RS17485 PF00005 ABC transporter FD428_RS17490 PF00593 TonB dependent receptor FD428_RS17490 PF07715 TonB-dependent Receptor Plug Domain FD428_RS17495 PF14814 Bifunctional transglycosylase second domain FD428_RS17495 PF00905 Penicillin binding protein transpeptidase domain FD428_RS17495 PF00912 Transglycosylase FD428_RS17495 PF14812 Transmembrane domain of transglycosylase PBP1 at N-terminal FD428_RS17500 PF00270 DEAD/DEAH box helicase FD428_RS17500 PF04408 Helicase associated domain (HA2) FD428_RS17500 PF00271 Helicase conserved C-terminal domain FD428_RS17500 PF08482 ATP-dependent helicase C-terminal FD428_RS17505 PF02834 LigT like Phosphoesterase FD428_RS17510 PF17746 SfsA N-terminal OB domain FD428_RS17510 PF03749 Sugar fermentation stimulation protein RE domain FD428_RS17515 PF01258 Prokaryotic dksA/traR C4-type zinc finger FD428_RS17520 PF00749 tRNA synthetases class I (E and Q), catalytic domain FD428_RS17525 PF12627 Probable RNA and SrmB- binding site of polymerase A FD428_RS17525 PF12626 Polymerase A arginine-rich C-terminus FD428_RS17525 PF01743 Poly A polymerase head domain FD428_RS17530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) FD428_RS17535 PF02548 Ketopantoate hydroxymethyltransferase FD428_RS17540 PF02569 Pantoate-beta-alanine ligase FD428_RS17545 PF02261 Aspartate decarboxylase FD428_RS17555 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS17555 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS17560 PF00577 Outer membrane usher protein FD428_RS17560 PF13954 PapC N-terminal domain FD428_RS17560 PF13953 PapC C-terminal domain FD428_RS17585 PF03610 PTS system fructose IIA component FD428_RS17590 PF01061 ABC-2 type transporter FD428_RS17595 PF00005 ABC transporter FD428_RS17600 PF00484 Carbonic anhydrase FD428_RS17605 PF00156 Phosphoribosyl transferase domain FD428_RS17610 PF01011 PQQ enzyme repeat FD428_RS17615 PF07731 Multicopper oxidase FD428_RS17615 PF00394 Multicopper oxidase FD428_RS17615 PF07732 Multicopper oxidase FD428_RS17620 PF09691 Type II secretion system pilotin lipoprotein (PulS_OutS) FD428_RS17625 PF17284 Spermidine synthase tetramerisation domain FD428_RS17630 PF02675 S-adenosylmethionine decarboxylase FD428_RS17635 PF06062 Uncharacterised protein family (UPF0231) FD428_RS17640 PF11791 Aconitate B N-terminal domain FD428_RS17640 PF06434 Aconitate hydratase 2 N-terminus FD428_RS17640 PF00330 Aconitase family (aconitate hydratase) FD428_RS17645 PF11737 Protein of unknown function (DUF3300) FD428_RS17655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FD428_RS17655 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS17660 PF02817 e3 binding domain FD428_RS17660 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) FD428_RS17660 PF00364 Biotin-requiring enzyme FD428_RS17665 PF17831 Pyruvate dehydrogenase E1 component middle domain FD428_RS17665 PF00456 Transketolase, thiamine diphosphate binding domain FD428_RS17670 PF00392 Bacterial regulatory proteins, gntR family FD428_RS17670 PF07729 FCD domain FD428_RS17675 PF00324 Amino acid permease FD428_RS17685 PF05270 Alpha-L-arabinofuranosidase B (ABFB) domain FD428_RS17685 PF04616 Glycosyl hydrolases family 43 FD428_RS17690 PF17113 Regulatory signalling modulator protein AmpE FD428_RS17695 PF01510 N-acetylmuramoyl-L-alanine amidase FD428_RS17700 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain FD428_RS17700 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain FD428_RS17705 PF07963 Prokaryotic N-terminal methylation motif FD428_RS17710 PF00437 Type II/IV secretion system protein FD428_RS17710 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain FD428_RS17715 PF00482 Type II secretion system (T2SS), protein F FD428_RS17720 PF00478 IMP dehydrogenase / GMP reductase domain FD428_RS17725 PF01121 Dephospho-CoA kinase FD428_RS17730 PF07072 Cell division protein FD428_RS17735 PF03884 DNA gyrase inhibitor YacG FD428_RS17740 PF00293 NUDIX domain FD428_RS17745 PF07517 SecA DEAD-like domain FD428_RS17745 PF02810 SEC-C motif FD428_RS17745 PF01043 SecA preprotein cross-linking domain FD428_RS17745 PF07516 SecA Wing and Scaffold domain FD428_RS17750 PF06558 Secretion monitor precursor protein (SecM) FD428_RS17755 PF03331 UDP-3-O-acyl N-acetylglycosamine deacetylase FD428_RS17760 PF12327 FtsZ family, C-terminal domain FD428_RS17760 PF00091 Tubulin/FtsZ family, GTPase domain FD428_RS17765 PF02491 SHS2 domain inserted in FTSA FD428_RS17770 PF08478 POTRA domain, FtsQ-type FD428_RS17770 PF03799 Cell division protein FtsQ FD428_RS17775 PF01820 D-ala D-ala ligase N-terminus FD428_RS17775 PF07478 D-ala D-ala ligase C-terminus FD428_RS17780 PF01225 Mur ligase family, catalytic domain FD428_RS17780 PF02875 Mur ligase family, glutamate ligase domain FD428_RS17780 PF08245 Mur ligase middle domain FD428_RS17785 PF03033 Glycosyltransferase family 28 N-terminal domain FD428_RS17785 PF04101 Glycosyltransferase family 28 C-terminal domain FD428_RS17790 PF01098 Cell cycle protein FD428_RS17795 PF08245 Mur ligase middle domain FD428_RS17795 PF02875 Mur ligase family, glutamate ligase domain FD428_RS17800 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 FD428_RS17800 PF00953 Glycosyl transferase family 4 FD428_RS17805 PF08245 Mur ligase middle domain FD428_RS17805 PF02875 Mur ligase family, glutamate ligase domain FD428_RS17805 PF01225 Mur ligase family, catalytic domain FD428_RS17810 PF01225 Mur ligase family, catalytic domain FD428_RS17810 PF08245 Mur ligase middle domain FD428_RS17810 PF02875 Mur ligase family, glutamate ligase domain FD428_RS17815 PF03717 Penicillin-binding Protein dimerisation domain FD428_RS17815 PF00905 Penicillin binding protein transpeptidase domain FD428_RS17820 PF04999 Cell division protein FtsL FD428_RS17825 PF01795 MraW methylase family FD428_RS17830 PF02381 MraZ protein, putative antitoxin-like FD428_RS17835 PF00532 Periplasmic binding proteins and sugar binding domain of LacI family FD428_RS17835 PF00356 Bacterial regulatory proteins, lacI family FD428_RS17840 PF10369 Small subunit of acetolactate synthase FD428_RS17845 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS17845 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS17845 PF00205 Thiamine pyrophosphate enzyme, central domain FD428_RS17850 PF03466 LysR substrate binding domain FD428_RS17850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS17855 PF08054 Leucine operon leader peptide FD428_RS17860 PF08502 LeuA allosteric (dimerisation) domain FD428_RS17860 PF00682 HMGL-like FD428_RS17865 PF00180 Isocitrate/isopropylmalate dehydrogenase FD428_RS17870 PF00330 Aconitase family (aconitate hydratase) FD428_RS17875 PF00694 Aconitase C-terminal domain FD428_RS17880 PF07690 Major Facilitator Superfamily FD428_RS17890 PF12793 Sugar transport-related sRNA regulator N-term FD428_RS17890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle FD428_RS17900 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS17905 PF00005 ABC transporter FD428_RS17910 PF09335 SNARE associated Golgi protein FD428_RS17915 PF12833 Helix-turn-helix domain FD428_RS17915 PF02311 AraC-like ligand binding domain FD428_RS17920 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS17925 PF11762 L-arabinose isomerase C-terminal domain FD428_RS17925 PF02610 L-arabinose isomerase FD428_RS17930 PF00596 Class II Aldolase and Adducin N-terminal domain FD428_RS17935 PF00136 DNA polymerase family B FD428_RS17935 PF03104 DNA polymerase family B, exonuclease domain FD428_RS17940 PF00176 SNF2 family N-terminal domain FD428_RS17940 PF12137 RNA polymerase recycling family C-terminal FD428_RS17940 PF18337 RapA N-terminal Tudor like domain FD428_RS17940 PF18339 RapA N-terminal Tudor like domain 1 FD428_RS17940 PF00271 Helicase conserved C-terminal domain FD428_RS17945 PF00849 RNA pseudouridylate synthase FD428_RS17950 PF00226 DnaJ domain FD428_RS17950 PF05099 Tellurite resistance protein TerB FD428_RS17955 PF04453 LPS transport system D FD428_RS17955 PF03968 OstA-like protein FD428_RS17960 PF09312 SurA N-terminal domain FD428_RS17960 PF00639 PPIC-type PPIASE domain FD428_RS17965 PF04166 Pyridoxal phosphate biosynthetic protein PdxA FD428_RS17970 PF00398 Ribosomal RNA adenine dimethylase FD428_RS17975 PF04379 ApaG domain FD428_RS17980 PF00149 Calcineurin-like phosphoesterase FD428_RS17985 PF00186 Dihydrofolate reductase FD428_RS17990 PF00999 Sodium/hydrogen exchanger family FD428_RS17990 PF02254 TrkA-N domain FD428_RS17995 PF02525 Flavodoxin-like fold FD428_RS18000 PF06004 Bacterial protein of unknown function (DUF903) FD428_RS18005 PF00083 Sugar (and other) transporter FD428_RS18015 PF01494 FAD binding domain FD428_RS18020 PF00766 Electron transfer flavoprotein FAD-binding domain FD428_RS18020 PF01012 Electron transfer flavoprotein domain FD428_RS18025 PF01012 Electron transfer flavoprotein domain FD428_RS18030 PF02028 BCCT, betaine/carnitine/choline family transporter FD428_RS18035 PF02771 Acyl-CoA dehydrogenase, N-terminal domain FD428_RS18035 PF02770 Acyl-CoA dehydrogenase, middle domain FD428_RS18035 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD428_RS18045 PF02515 CoA-transferase family III FD428_RS18050 PF13193 AMP-binding enzyme C-terminal domain FD428_RS18050 PF00501 AMP-binding enzyme FD428_RS18055 PF00378 Enoyl-CoA hydratase/isomerase FD428_RS18060 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS18065 PF07180 CaiF/GrlA transcriptional regulator FD428_RS18070 PF02142 MGS-like domain FD428_RS18070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain FD428_RS18070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain FD428_RS18075 PF00117 Glutamine amidotransferase class-I FD428_RS18075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain FD428_RS18080 PF01113 Dihydrodipicolinate reductase, N-terminus FD428_RS18080 PF05173 Dihydrodipicolinate reductase, C-terminus FD428_RS18090 PF03466 LysR substrate binding domain FD428_RS18090 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS18095 PF01156 Inosine-uridine preferring nucleoside hydrolase FD428_RS18100 PF01557 Fumarylacetoacetate (FAA) hydrolase family FD428_RS18105 PF03390 2-hydroxycarboxylate transporter family FD428_RS18110 PF17203 Single cache domain 3 FD428_RS18110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS18115 PF12431 Transcriptional regulator FD428_RS18115 PF00072 Response regulator receiver domain FD428_RS18120 PF02401 LytB protein FD428_RS18125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD428_RS18130 PF01252 Signal peptidase (SPase) II FD428_RS18135 PF00133 tRNA synthetases class I (I, L, M and V) FD428_RS18135 PF06827 Zinc finger found in FPG and IleRS FD428_RS18135 PF08264 Anticodon-binding domain of tRNA FD428_RS18140 PF06574 FAD synthetase FD428_RS18140 PF01687 Riboflavin kinase FD428_RS18145 PF10837 Protein of unknown function (DUF2575) FD428_RS18150 PF01649 Ribosomal protein S20 FD428_RS18155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS18155 PF03466 LysR substrate binding domain FD428_RS18160 PF06965 Na+/H+ antiporter 1 FD428_RS18165 PF00684 DnaJ central domain FD428_RS18165 PF01556 DnaJ C terminal domain FD428_RS18165 PF00226 DnaJ domain FD428_RS18170 PF00012 Hsp70 protein FD428_RS18175 PF01184 GPR1/FUN34/yaaH family FD428_RS18180 PF07690 Major Facilitator Superfamily FD428_RS18185 PF00994 Probable molybdopterin binding domain FD428_RS18190 PF00923 Transaldolase/Fructose-6-phosphate aldolase FD428_RS18195 PF01235 Sodium:alanine symporter family FD428_RS18200 PF03883 Peroxide stress protein YaaA FD428_RS18205 PF10697 Protein of unknown function (DUF2502) FD428_RS18210 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS18210 PF14821 Threonine synthase N terminus FD428_RS18215 PF00288 GHMP kinases N terminal domain FD428_RS18215 PF08544 GHMP kinases C terminal FD428_RS18220 PF01842 ACT domain FD428_RS18220 PF00742 Homoserine dehydrogenase FD428_RS18220 PF13840 ACT domain FD428_RS18220 PF00696 Amino acid kinase family FD428_RS18220 PF03447 Homoserine dehydrogenase, NAD binding domain FD428_RS18225 PF08254 Threonine leader peptide FD428_RS18230 PF00588 SpoU rRNA Methylase family FD428_RS18240 PF00486 Transcriptional regulatory protein, C terminal FD428_RS18240 PF00072 Response regulator receiver domain FD428_RS18245 PF05981 CreA protein FD428_RS18250 PF12833 Helix-turn-helix domain FD428_RS18250 PF06445 GyrI-like small molecule binding domain FD428_RS18255 PF00300 Histidine phosphatase superfamily (branch 1) FD428_RS18260 PF01931 Protein of unknown function DUF84 FD428_RS18265 PF01371 Trp repressor protein FD428_RS18270 PF14718 Soluble lytic murein transglycosylase L domain FD428_RS18270 PF01464 Transglycosylase SLT domain FD428_RS18275 PF00005 ABC transporter FD428_RS18275 PF12848 ABC transporter FD428_RS18280 PF01381 Helix-turn-helix FD428_RS18280 PF13521 AAA domain FD428_RS18285 PF18073 Rubredoxin metal binding domain FD428_RS18290 PF18429 Domain of unknown function (DUF5609) FD428_RS18295 PF10144 Bacterial virulence factor haemolysin FD428_RS18300 PF03099 Biotin/lipoate A/B protein ligase family FD428_RS18300 PF10437 Bacterial lipoate protein ligase C-terminus FD428_RS18310 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS18315 PF13954 PapC N-terminal domain FD428_RS18315 PF13953 PapC C-terminal domain FD428_RS18315 PF00577 Outer membrane usher protein FD428_RS18325 PF01048 Phosphorylase superfamily FD428_RS18330 PF01676 Metalloenzyme superfamily FD428_RS18335 PF02885 Glycosyl transferase family, helical bundle domain FD428_RS18335 PF00591 Glycosyl transferase family, a/b domain FD428_RS18335 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain FD428_RS18340 PF01791 DeoC/LacD family aldolase FD428_RS18345 PF11230 Protein of unknown function (DUF3029) FD428_RS18350 PF04055 Radical SAM superfamily FD428_RS18355 PF01026 TatD related DNase FD428_RS18360 PF01734 Patatin-like phospholipase FD428_RS18365 PF07043 Protein of unknown function (DUF1328) FD428_RS18370 PF04972 BON domain FD428_RS18375 PF03144 Elongation factor Tu domain 2 FD428_RS18375 PF00009 Elongation factor Tu GTP binding domain FD428_RS18375 PF16658 Class II release factor RF3, C-terminal domain FD428_RS18380 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS18385 PF00583 Acetyltransferase (GNAT) family FD428_RS18390 PF03603 DNA polymerase III psi subunit FD428_RS18395 PF08468 Methyltransferase small domain N-terminal FD428_RS18395 PF05175 Methyltransferase small domain FD428_RS18420 PF07256 Protein of unknown function (DUF1435) FD428_RS18425 PF00990 Diguanylate cyclase, GGDEF domain FD428_RS18430 PF06276 Ferric iron reductase FhuF-like transporter FD428_RS18430 PF11575 FhuF 2Fe-2S C-terminal domain FD428_RS18435 PF02378 Phosphotransferase system, EIIC FD428_RS18440 PF04073 Aminoacyl-tRNA editing domain FD428_RS18445 PF00196 Bacterial regulatory proteins, luxR family FD428_RS18450 PF00196 Bacterial regulatory proteins, luxR family FD428_RS18455 PF06738 Putative threonine/serine exporter FD428_RS18460 PF12821 Threonine/Serine exporter, ThrE FD428_RS18465 PF17948 DnaT DNA-binding domain FD428_RS18470 PF01695 IstB-like ATP binding protein FD428_RS18475 PF10696 Protein of unknown function (DUF2501) FD428_RS18480 PF00884 Sulfatase FD428_RS18485 PF00583 Acetyltransferase (GNAT) family FD428_RS18490 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS18490 PF00672 HAMP domain FD428_RS18490 PF02203 Tar ligand binding domain homologue FD428_RS18495 PF13722 5TM C-terminal transporter carbon starvation CstA FD428_RS18495 PF02554 Carbon starvation protein CstA FD428_RS18500 PF04328 Selenoprotein, putative FD428_RS18505 PF07683 Cobalamin synthesis protein cobW C-terminal domain FD428_RS18505 PF02492 CobW/HypB/UreG, nucleotide-binding domain FD428_RS18515 PF04851 Type III restriction enzyme, res subunit FD428_RS18515 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) FD428_RS18515 PF00271 Helicase conserved C-terminal domain FD428_RS18515 PF08463 EcoEI R protein C-terminal FD428_RS18520 PF12161 HsdM N-terminal domain FD428_RS18520 PF02384 N-6 DNA Methylase FD428_RS18525 PF01420 Type I restriction modification DNA specificity domain FD428_RS18530 PF08845 Toxin SymE, type I toxin-antitoxin system FD428_RS18540 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion FD428_RS18540 PF00529 HlyD membrane-fusion protein of T1SS FD428_RS18550 PF06568 Domain of unknown function (DUF1127) FD428_RS18555 PF00155 Aminotransferase class I and II FD428_RS18555 PF00392 Bacterial regulatory proteins, gntR family FD428_RS18565 PF07690 Major Facilitator Superfamily FD428_RS18570 PF04286 Protein of unknown function (DUF445) FD428_RS18575 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component FD428_RS18580 PF01869 BadF/BadG/BcrA/BcrD ATPase family FD428_RS18585 PF11823 Protein of unknown function (DUF3343) FD428_RS18590 PF06779 Uncharacterised MFS-type transporter YbfB FD428_RS18595 PF00579 tRNA synthetases class I (W and Y) FD428_RS18600 PF03222 Tryptophan/tyrosine permease family FD428_RS18605 PF01212 Beta-eliminating lyase FD428_RS18615 PF09553 Eco47II restriction endonuclease FD428_RS18620 PF13411 MerR HTH family regulatory protein FD428_RS18620 PF00145 C-5 cytosine-specific DNA methylase FD428_RS18685 PF16124 RecQ zinc-binding FD428_RS18685 PF09382 RQC domain FD428_RS18685 PF00271 Helicase conserved C-terminal domain FD428_RS18685 PF00270 DEAD/DEAH box helicase FD428_RS18685 PF00570 HRDC domain FD428_RS18690 PF02796 Helix-turn-helix domain of resolvase FD428_RS18690 PF00239 Resolvase, N terminal domain FD428_RS18705 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS18705 PF00107 Zinc-binding dehydrogenase FD428_RS18710 PF05872 Bacterial protein of unknown function (DUF853) FD428_RS18715 PF03739 Lipopolysaccharide export system permease LptF/LptG FD428_RS18720 PF03739 Lipopolysaccharide export system permease LptF/LptG FD428_RS18725 PF00883 Cytosol aminopeptidase family, catalytic domain FD428_RS18725 PF02789 Cytosol aminopeptidase family, N-terminal domain FD428_RS18730 PF04364 DNA polymerase III chi subunit, HolC FD428_RS18735 PF00133 tRNA synthetases class I (I, L, M and V) FD428_RS18735 PF10458 Valyl tRNA synthetase tRNA binding arm FD428_RS18735 PF08264 Anticodon-binding domain of tRNA FD428_RS18740 PF00583 Acetyltransferase (GNAT) family FD428_RS18745 PF06877 Regulator of ribonuclease activity B FD428_RS18750 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FD428_RS18750 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FD428_RS18755 PF04074 YhcH/YjgK/YiaL FD428_RS18765 PF00696 Amino acid kinase family FD428_RS18770 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FD428_RS18770 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FD428_RS18775 PF03606 C4-dicarboxylate anaerobic carrier FD428_RS18780 PF01316 Arginine repressor, DNA binding domain FD428_RS18780 PF02863 Arginine repressor, C-terminal domain FD428_RS18790 PF08052 PyrBI operon leader peptide FD428_RS18795 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain FD428_RS18795 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain FD428_RS18800 PF02748 Aspartate carbamoyltransferase regulatory chain, metal binding domain FD428_RS18800 PF01948 Aspartate carbamoyltransferase regulatory chain, allosteric domain FD428_RS18805 PF01042 Endoribonuclease L-PSP FD428_RS18810 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FD428_RS18820 PF00689 Cation transporting ATPase, C-terminus FD428_RS18820 PF00690 Cation transporter/ATPase, N-terminus FD428_RS18825 PF00356 Bacterial regulatory proteins, lacI family FD428_RS18830 PF00367 phosphotransferase system, EIIB FD428_RS18830 PF02378 Phosphotransferase system, EIIC FD428_RS18835 PF00128 Alpha amylase, catalytic domain FD428_RS18835 PF11941 Domain of unknown function (DUF3459) FD428_RS18845 PF01380 SIS domain FD428_RS18845 PF01418 Helix-turn-helix domain, rpiR family FD428_RS18850 PF02378 Phosphotransferase system, EIIC FD428_RS18855 PF01074 Glycosyl hydrolases family 38 N-terminal domain FD428_RS18855 PF09261 Alpha mannosidase middle domain FD428_RS18855 PF07748 Glycosyl hydrolases family 38 C-terminal domain FD428_RS18860 PF00128 Alpha amylase, catalytic domain FD428_RS18865 PF02378 Phosphotransferase system, EIIC FD428_RS18865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS18865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS18870 PF03477 ATP cone domain FD428_RS18870 PF13597 Anaerobic ribonucleoside-triphosphate reductase FD428_RS18880 PF08279 HTH domain FD428_RS18880 PF05043 Mga helix-turn-helix domain FD428_RS18880 PF00874 PRD domain FD428_RS18880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS18885 PF07071 KDGP aldolase FD428_RS18890 PF03841 L-seryl-tRNA selenium transferase FD428_RS18895 PF01979 Amidohydrolase family FD428_RS18925 PF07361 Cytochrome b562 FD428_RS18930 PF01523 Putative modulator of DNA gyrase FD428_RS18935 PF04751 Protein of unknown function (DUF615) FD428_RS18940 PF01225 Mur ligase family, catalytic domain FD428_RS18940 PF02875 Mur ligase family, glutamate ligase domain FD428_RS18940 PF08245 Mur ligase middle domain FD428_RS18945 PF00316 Fructose-1-6-bisphosphatase, N-terminal domain FD428_RS18950 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS18950 PF02203 Tar ligand binding domain homologue FD428_RS18950 PF00672 HAMP domain FD428_RS18955 PF02653 Branched-chain amino acid transport system / permease component FD428_RS18960 PF02653 Branched-chain amino acid transport system / permease component FD428_RS18965 PF00005 ABC transporter FD428_RS18970 PF13407 Periplasmic binding protein domain FD428_RS18975 PF00719 Inorganic pyrophosphatase FD428_RS18980 PF06094 Gamma-glutamyl cyclotransferase, AIG2-like FD428_RS18985 PF04357 TamB, inner membrane protein subunit of TAM complex FD428_RS18990 PF17243 POTRA domain TamA domain 1 FD428_RS18990 PF07244 Surface antigen variable number repeat FD428_RS18990 PF01103 Surface antigen FD428_RS18995 PF01625 Peptide methionine sulfoxide reductase FD428_RS19000 PF00571 CBS domain FD428_RS19000 PF03471 Transporter associated domain FD428_RS19000 PF01595 Cyclin M transmembrane N-terminal domain FD428_RS19005 PF06526 Protein of unknown function (DUF1107) FD428_RS19010 PF09695 Bacterial protein of unknown function (YtfJ_HI0045) FD428_RS19015 PF00459 Inositol monophosphatase family FD428_RS19020 PF02872 5'-nucleotidase, C-terminal domain FD428_RS19020 PF00149 Calcineurin-like phosphoesterase FD428_RS19025 PF01638 HxlR-like helix-turn-helix FD428_RS19030 PF05368 NmrA-like family FD428_RS19040 PF00892 EamA-like transporter family FD428_RS19045 PF00672 HAMP domain FD428_RS19045 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS19045 PF02203 Tar ligand binding domain homologue FD428_RS19050 PF04405 Domain of Unknown function (DUF542) FD428_RS19050 PF01814 Hemerythrin HHE cation binding domain FD428_RS19055 PF00324 Amino acid permease FD428_RS19060 PF01346 Domain amino terminal to FKBP-type peptidyl-prolyl isomerase FD428_RS19060 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase FD428_RS19065 PF08525 Opacity-associated protein A N-terminal motif FD428_RS19065 PF04225 Opacity-associated protein A LysM-like domain FD428_RS19075 PF01281 Ribosomal protein L9, N-terminal domain FD428_RS19075 PF03948 Ribosomal protein L9, C-terminal domain FD428_RS19080 PF01084 Ribosomal protein S18 FD428_RS19085 PF00436 Single-strand binding protein family FD428_RS19090 PF01250 Ribosomal protein S6 FD428_RS19095 PF07338 Protein of unknown function (DUF1471) FD428_RS19100 PF00596 Class II Aldolase and Adducin N-terminal domain FD428_RS19105 PF01261 Xylose isomerase-like TIM barrel FD428_RS19110 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family FD428_RS19115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS19120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS19125 PF03611 PTS system sugar-specific permease component FD428_RS19135 PF00455 DeoR C terminal sensor domain FD428_RS19135 PF08220 DeoR-like helix-turn-helix domain FD428_RS19140 PF00326 Prolyl oligopeptidase family FD428_RS19145 PF07338 Protein of unknown function (DUF1471) FD428_RS19150 PF07338 Protein of unknown function (DUF1471) FD428_RS19155 PF18158 Adaptive response protein AidB N-terminal domain FD428_RS19155 PF02770 Acyl-CoA dehydrogenase, middle domain FD428_RS19155 PF00441 Acyl-CoA dehydrogenase, C-terminal domain FD428_RS19160 PF08032 RNA 2'-O ribose methyltransferase substrate binding FD428_RS19160 PF00588 SpoU rRNA Methylase family FD428_RS19165 PF00575 S1 RNA binding domain FD428_RS19165 PF00773 RNB domain FD428_RS19165 PF08206 Ribonuclease B OB domain FD428_RS19165 PF08461 Ribonuclease R winged-helix domain FD428_RS19165 PF17876 Cold shock domain FD428_RS19170 PF02082 Transcriptional regulator FD428_RS19175 PF00709 Adenylosuccinate synthetase FD428_RS19180 PF09838 Uncharacterized protein conserved in bacteria (DUF2065) FD428_RS19185 PF01145 SPFH domain / Band 7 family FD428_RS19190 PF12221 Bacterial membrane protein N terminal FD428_RS19190 PF01145 SPFH domain / Band 7 family FD428_RS19195 PF13167 GTP-binding GTPase N-terminal FD428_RS19195 PF01926 50S ribosome-binding GTPase FD428_RS19195 PF16360 GTP-binding GTPase Middle Region FD428_RS19200 PF17209 Hfq protein FD428_RS19210 PF08676 MutL C terminal dimerisation domain FD428_RS19210 PF01119 DNA mismatch repair protein, C-terminal domain FD428_RS19215 PF01520 N-acetylmuramoyl-L-alanine amidase FD428_RS19220 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE FD428_RS19225 PF01256 Carbohydrate kinase FD428_RS19225 PF03853 YjeF-related protein N-terminus FD428_RS19230 PF08331 Domain of unknown function (DUF1730) FD428_RS19250 PF00929 Exonuclease FD428_RS19255 PF03193 RsgA GTPase FD428_RS19260 PF02666 Phosphatidylserine decarboxylase FD428_RS19265 PF12795 Mechanosensitive ion channel porin domain FD428_RS19265 PF00924 Mechanosensitive ion channel FD428_RS19265 PF12794 Mechanosensitive ion channel inner membrane domain 1 FD428_RS19270 PF10840 Protein of unknown function (DUF2645) FD428_RS19280 PF13520 Amino acid permease FD428_RS19285 PF00152 tRNA synthetases class II (D, K and N) FD428_RS19290 PF00890 FAD binding domain FD428_RS19290 PF02910 Fumarate reductase flavoprotein C-term FD428_RS19295 PF13183 4Fe-4S dicluster domain FD428_RS19295 PF13085 2Fe-2S iron-sulfur cluster binding domain FD428_RS19300 PF02300 Fumarate reductase subunit C FD428_RS19305 PF02313 Fumarate reductase subunit D FD428_RS19310 PF08212 Lipocalin-like domain FD428_RS19315 PF00893 Small Multidrug Resistance protein FD428_RS19325 PF00196 Bacterial regulatory proteins, luxR family FD428_RS19330 PF08085 Entericidin EcnA/B family FD428_RS19335 PF08085 Entericidin EcnA/B family FD428_RS19340 PF08207 Elongation factor P (EF-P) KOW-like domain FD428_RS19340 PF01132 Elongation factor P (EF-P) OB domain FD428_RS19340 PF09285 Elongation factor P, C-terminal FD428_RS19345 PF04055 Radical SAM superfamily FD428_RS19350 PF15922 YjeJ-like FD428_RS19355 PF13698 Domain of unknown function (DUF4156) FD428_RS19360 PF00118 TCP-1/cpn60 chaperonin family FD428_RS19365 PF00166 Chaperonin 10 Kd subunit FD428_RS19370 PF13520 Amino acid permease FD428_RS19375 PF04186 FxsA cytoplasmic membrane protein FD428_RS19380 PF00206 Lyase FD428_RS19380 PF10415 Fumarase C C-terminus FD428_RS19385 PF03605 Anaerobic c4-dicarboxylate membrane transporter FD428_RS19390 PF03091 CutA1 divalent ion tolerance protein FD428_RS19395 PF11412 Disulphide bond corrector protein DsbC FD428_RS19395 PF02683 Cytochrome C biogenesis protein transmembrane region FD428_RS19415 PF00589 Phage integrase family FD428_RS19420 PF00589 Phage integrase family FD428_RS19425 PF00419 Fimbrial protein FD428_RS19430 PF00419 Fimbrial protein FD428_RS19435 PF02753 Pili assembly chaperone PapD, C-terminal domain FD428_RS19435 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS19440 PF13954 PapC N-terminal domain FD428_RS19440 PF00577 Outer membrane usher protein FD428_RS19440 PF13953 PapC C-terminal domain FD428_RS19445 PF00419 Fimbrial protein FD428_RS19455 PF00419 Fimbrial protein FD428_RS19455 PF09160 FimH, mannose binding FD428_RS19465 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain FD428_RS19465 PF00672 HAMP domain FD428_RS19465 PF02203 Tar ligand binding domain homologue FD428_RS19470 PF00390 Malic enzyme, N-terminal domain FD428_RS19470 PF03949 Malic enzyme, NAD binding domain FD428_RS19475 PF03606 C4-dicarboxylate anaerobic carrier FD428_RS19480 PF01380 SIS domain FD428_RS19480 PF01418 Helix-turn-helix domain, rpiR family FD428_RS19485 PF10397 Adenylosuccinate lyase C-terminus FD428_RS19485 PF00206 Lyase FD428_RS19490 PF00267 Gram-negative porin FD428_RS19500 PF00593 TonB dependent receptor FD428_RS19500 PF07715 TonB-dependent Receptor Plug Domain FD428_RS19505 PF00356 Bacterial regulatory proteins, lacI family FD428_RS19520 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component FD428_RS19530 PF08125 Mannitol dehydrogenase C-terminal domain FD428_RS19530 PF01232 Mannitol dehydrogenase Rossmann domain FD428_RS19540 PF02614 Glucuronate isomerase FD428_RS19545 PF03786 D-mannonate dehydratase (UxuA) FD428_RS19560 PF00593 TonB dependent receptor FD428_RS19560 PF07715 TonB-dependent Receptor Plug Domain FD428_RS19565 PF05171 Haemin-degrading HemS.ChuX domain FD428_RS19570 PF01497 Periplasmic binding protein FD428_RS19575 PF01032 FecCD transport family FD428_RS19580 PF00005 ABC transporter FD428_RS19585 PF03824 High-affinity nickel-transport protein FD428_RS19590 PF17203 Single cache domain 3 FD428_RS19590 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS19590 PF00989 PAS fold FD428_RS19590 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain FD428_RS19595 PF00072 Response regulator receiver domain FD428_RS19600 PF03605 Anaerobic c4-dicarboxylate membrane transporter FD428_RS19605 PF05681 Fumarate hydratase (Fumerase) FD428_RS19605 PF05683 Fumarase C-terminus FD428_RS19610 PF00884 Sulfatase FD428_RS19610 PF08019 Phosphoethanolamine transferase EptA/EptB FD428_RS19615 PF00486 Transcriptional regulatory protein, C terminal FD428_RS19615 PF00072 Response regulator receiver domain FD428_RS19620 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS19620 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS19630 PF08946 Osmosensory transporter coiled coil FD428_RS19630 PF00083 Sugar (and other) transporter FD428_RS19635 PF03812 2-keto-3-deoxygluconate permease FD428_RS19640 PF13990 YjcZ-like protein FD428_RS19645 PF00350 Dynamin family FD428_RS19650 PF08274 PhnA Zinc-Ribbon FD428_RS19650 PF03831 PhnA domain FD428_RS19655 PF06983 3-demethylubiquinone-9 3-methyltransferase FD428_RS19660 PF00005 ABC transporter FD428_RS19670 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS19675 PF07702 UTRA domain FD428_RS19675 PF00392 Bacterial regulatory proteins, gntR family FD428_RS19680 PF06754 Phosphonate metabolism protein PhnG FD428_RS19685 PF05845 Bacterial phosphonate metabolism protein (PhnH) FD428_RS19690 PF05861 Bacterial phosphonate metabolism protein (PhnI) FD428_RS19695 PF06007 Phosphonate metabolism protein PhnJ FD428_RS19700 PF00005 ABC transporter FD428_RS19710 PF00005 ABC transporter FD428_RS19715 PF07969 Amidohydrolase family FD428_RS19725 PF00583 Acetyltransferase (GNAT) family FD428_RS19730 PF12706 Beta-lactamase superfamily domain FD428_RS19740 PF02502 Ribose/Galactose Isomerase FD428_RS19745 PF01380 SIS domain FD428_RS19745 PF01418 Helix-turn-helix domain, rpiR family FD428_RS19750 PF13407 Periplasmic binding protein domain FD428_RS19755 PF00005 ABC transporter FD428_RS19760 PF02653 Branched-chain amino acid transport system / permease component FD428_RS19765 PF00834 Ribulose-phosphate 3 epimerase family FD428_RS19770 PF00480 ROK family FD428_RS19775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS19775 PF13426 PAS domain FD428_RS19775 PF00072 Response regulator receiver domain FD428_RS19785 PF00005 ABC transporter FD428_RS19790 PF02653 Branched-chain amino acid transport system / permease component FD428_RS19795 PF13407 Periplasmic binding protein domain FD428_RS19805 PF01116 Fructose-bisphosphate aldolase class-II FD428_RS19810 PF01467 Cytidylyltransferase-like FD428_RS19810 PF00294 pfkB family carbohydrate kinase FD428_RS19815 PF00486 Transcriptional regulatory protein, C terminal FD428_RS19815 PF00072 Response regulator receiver domain FD428_RS19825 PF08238 Sel1 repeat FD428_RS19830 PF00375 Sodium:dicarboxylate symporter family FD428_RS19840 PF03918 Cytochrome C biogenesis protein FD428_RS19845 PF16327 Cytochrome c-type biogenesis protein CcmF C-terminal FD428_RS19845 PF01578 Cytochrome C assembly protein FD428_RS19850 PF03916 Polysulphide reductase, NrfD FD428_RS19855 PF00037 4Fe-4S binding domain FD428_RS19855 PF13247 4Fe-4S dicluster domain FD428_RS19860 PF09699 Doubled CXXCH motif (Paired_CXXCH_1) FD428_RS19860 PF13435 Cytochrome c554 and c-prime FD428_RS19865 PF02335 Cytochrome c552 FD428_RS19870 PF13193 AMP-binding enzyme C-terminal domain FD428_RS19870 PF00501 AMP-binding enzyme FD428_RS19870 PF16177 Acetyl-coenzyme A synthetase N-terminus FD428_RS19875 PF04341 Protein of unknown function, DUF485 FD428_RS19880 PF00474 Sodium:solute symporter family FD428_RS19885 PF04172 LrgB-like family FD428_RS19890 PF03788 LrgA family FD428_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS19895 PF03466 LysR substrate binding domain FD428_RS19900 PF00999 Sodium/hydrogen exchanger family FD428_RS19905 PF00860 Permease family FD428_RS19910 PF00043 Glutathione S-transferase, C-terminal domain FD428_RS19910 PF02798 Glutathione S-transferase, N-terminal domain FD428_RS19915 PF00376 MerR family regulatory protein FD428_RS19915 PF09278 MerR, DNA binding FD428_RS19920 PF12833 Helix-turn-helix domain FD428_RS19925 PF12792 CSS motif domain associated with EAL FD428_RS19925 PF00563 EAL domain FD428_RS19930 PF15940 Family of unknown function FD428_RS19935 PF04542 Sigma-70 region 2 FD428_RS19935 PF08281 Sigma-70, region 4 FD428_RS19940 PF04773 FecR protein FD428_RS19940 PF16220 Domain of unknown function (DUF4880) FD428_RS19945 PF00593 TonB dependent receptor FD428_RS19945 PF07660 Secretin and TonB N terminus short domain FD428_RS19945 PF07715 TonB-dependent Receptor Plug Domain FD428_RS19950 PF01497 Periplasmic binding protein FD428_RS19955 PF01032 FecCD transport family FD428_RS19960 PF01032 FecCD transport family FD428_RS19965 PF00005 ABC transporter FD428_RS19970 PF00690 Cation transporter/ATPase, N-terminus FD428_RS19970 PF00689 Cation transporting ATPase, C-terminus FD428_RS19975 PF00582 Universal stress protein family FD428_RS19980 PF00436 Single-strand binding protein family FD428_RS19990 PF00005 ABC transporter FD428_RS19990 PF17755 UvrA DNA-binding domain FD428_RS19990 PF17760 UvrA interaction domain FD428_RS19995 PF04237 YjbR FD428_RS20000 PF03767 HAD superfamily, subfamily IIIB (Acid phosphatase) FD428_RS20005 PF00155 Aminotransferase class I and II FD428_RS20010 PF00842 Alanine racemase, C-terminal domain FD428_RS20010 PF01168 Alanine racemase, N-terminal domain FD428_RS20015 PF03796 DnaB-like helicase C terminal domain FD428_RS20015 PF00772 DnaB-like helicase N terminal domain FD428_RS20020 PF00107 Zinc-binding dehydrogenase FD428_RS20020 PF08240 Alcohol dehydrogenase GroES-like domain FD428_RS20025 PF09583 Phage shock protein G (Phageshock_PspG) FD428_RS20030 PF01207 Dihydrouridine synthase (Dus) FD428_RS20045 PF05638 Type VI secretion system effector, Hcp FD428_RS20050 PF01475 Ferric uptake regulator family FD428_RS20055 PF05532 CsbD-like FD428_RS20060 PF01554 MatE FD428_RS20065 PF00717 Peptidase S24-like FD428_RS20065 PF01726 LexA DNA binding domain FD428_RS20070 PF01219 Prokaryotic diacylglycerol kinase FD428_RS20075 PF01553 Acyltransferase FD428_RS20080 PF01040 UbiA prenyltransferase family FD428_RS20085 PF04345 Chorismate lyase FD428_RS20090 PF07148 Maltose operon periplasmic protein precursor (MalM) FD428_RS20095 PF02264 LamB porin FD428_RS20100 PF17912 MalK OB fold domain FD428_RS20100 PF00005 ABC transporter FD428_RS20105 PF01547 Bacterial extracellular solute-binding protein FD428_RS20110 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS20110 PF14785 Maltose transport system permease protein MalF P2 domain FD428_RS20115 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS20120 PF06146 Phosphate-starvation-inducible E FD428_RS20125 PF14602 Hexapeptide repeat of succinyl-transferase FD428_RS20125 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS20125 PF12464 Maltose acetyltransferase FD428_RS20130 PF06082 Exopolysaccharide biosynthesis protein YbjH FD428_RS20135 PF06251 Capsule biosynthesis GfcC FD428_RS20140 PF11102 Group 4 capsule polysaccharide lipoprotein gfcB, YjbF FD428_RS20145 PF11106 Exopolysaccharide production protein YjbE FD428_RS20150 PF00342 Phosphoglucose isomerase FD428_RS20155 PF00696 Amino acid kinase family FD428_RS20155 PF01842 ACT domain FD428_RS20160 PF01758 Sodium Bile acid symporter family FD428_RS20165 PF11656 YjbD family (DUF3811) FD428_RS20170 PF01479 S4 domain FD428_RS20170 PF00849 RNA pseudouridylate synthase FD428_RS20175 PF03575 Peptidase family S51 FD428_RS20180 PF02690 Na+/Pi-cotransporter FD428_RS20185 PF02574 Homocysteine S-methyltransferase FD428_RS20185 PF00809 Pterin binding enzyme FD428_RS20185 PF02965 Vitamin B12 dependent methionine synthase, activation domain FD428_RS20185 PF02607 B12 binding domain FD428_RS20185 PF02310 B12 binding domain FD428_RS20190 PF09339 IclR helix-turn-helix domain FD428_RS20190 PF01614 Bacterial transcriptional regulator FD428_RS20195 PF06315 Isocitrate dehydrogenase kinase/phosphatase (AceK) FD428_RS20200 PF00463 Isocitrate lyase family FD428_RS20205 PF01274 Malate synthase FD428_RS20210 PF04204 Homoserine O-succinyltransferase FD428_RS20215 PF13673 Acetyltransferase (GNAT) domain FD428_RS20240 PF02142 MGS-like domain FD428_RS20240 PF01808 AICARFT/IMPCHase bienzyme FD428_RS20245 PF02843 Phosphoribosylglycinamide synthetase, C domain FD428_RS20245 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain FD428_RS20245 PF02844 Phosphoribosylglycinamide synthetase, N domain FD428_RS20250 PF07356 Protein of unknown function (DUF1481) FD428_RS20255 PF00216 Bacterial DNA-binding protein FD428_RS20260 PF04222 Protein of unknown function (DUF416) FD428_RS20265 PF04493 Endonuclease V FD428_RS20270 PF01208 Uroporphyrinogen decarboxylase (URO-D) FD428_RS20275 PF09297 NADH pyrophosphatase zinc ribbon domain FD428_RS20275 PF00293 NUDIX domain FD428_RS20280 PF04353 Regulator of RNA polymerase sigma(70) subunit, Rsd/AlgQ FD428_RS20285 PF13667 ThiC-associated domain FD428_RS20285 PF01964 Radical SAM ThiC family FD428_RS20290 PF02581 Thiamine monophosphate synthase FD428_RS20295 PF00899 ThiF family FD428_RS20300 PF02597 ThiS family FD428_RS20305 PF05690 Thiazole biosynthesis protein ThiG FD428_RS20310 PF04055 Radical SAM superfamily FD428_RS20310 PF06968 Biotin and Thiamin Synthesis associated domain FD428_RS20320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS20325 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit FD428_RS20340 PF04983 RNA polymerase Rpb1, domain 3 FD428_RS20340 PF00623 RNA polymerase Rpb1, domain 2 FD428_RS20340 PF04997 RNA polymerase Rpb1, domain 1 FD428_RS20340 PF05000 RNA polymerase Rpb1, domain 4 FD428_RS20340 PF04998 RNA polymerase Rpb1, domain 5 FD428_RS20345 PF04565 RNA polymerase Rpb2, domain 3 FD428_RS20345 PF04561 RNA polymerase Rpb2, domain 2 FD428_RS20345 PF10385 RNA polymerase beta subunit external 1 domain FD428_RS20345 PF00562 RNA polymerase Rpb2, domain 6 FD428_RS20345 PF04563 RNA polymerase beta subunit FD428_RS20345 PF04560 RNA polymerase Rpb2, domain 7 FD428_RS20350 PF00542 Ribosomal protein L7/L12 C-terminal domain FD428_RS20350 PF16320 Ribosomal protein L7/L12 dimerisation domain FD428_RS20355 PF00466 Ribosomal protein L10 FD428_RS20360 PF00687 Ribosomal protein L1p/L10e family FD428_RS20365 PF03946 Ribosomal protein L11, N-terminal domain FD428_RS20365 PF00298 Ribosomal protein L11, RNA binding domain FD428_RS20370 PF02357 Transcription termination factor nusG FD428_RS20370 PF00467 KOW motif FD428_RS20375 PF00584 SecE/Sec61-gamma subunits of protein translocation complex FD428_RS20380 PF03144 Elongation factor Tu domain 2 FD428_RS20380 PF00009 Elongation factor Tu GTP binding domain FD428_RS20380 PF03143 Elongation factor Tu C-terminal domain FD428_RS20410 PF00485 Phosphoribulokinase / Uridine kinase family FD428_RS20415 PF03099 Biotin/lipoate A/B protein ligase family FD428_RS20415 PF08279 HTH domain FD428_RS20415 PF02237 Biotin protein ligase C terminal domain FD428_RS20420 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain FD428_RS20420 PF01565 FAD binding domain FD428_RS20450 PF01177 Asp/Glu/Hydantoin racemase FD428_RS20455 PF07715 TonB-dependent Receptor Plug Domain FD428_RS20455 PF00593 TonB dependent receptor FD428_RS20460 PF05958 tRNA (Uracil-5-)-methyltransferase FD428_RS20465 PF07226 Protein of unknown function (DUF1422) FD428_RS20470 PF00440 Bacterial regulatory proteins, tetR family FD428_RS20475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain FD428_RS20475 PF07992 Pyridine nucleotide-disulphide oxidoreductase FD428_RS20480 PF03466 LysR substrate binding domain FD428_RS20480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS20485 PF00206 Lyase FD428_RS20485 PF14698 Argininosuccinate lyase C-terminal FD428_RS20490 PF00696 Amino acid kinase family FD428_RS20495 PF01118 Semialdehyde dehydrogenase, NAD binding domain FD428_RS20495 PF02774 Semialdehyde dehydrogenase, dimerisation domain FD428_RS20500 PF07687 Peptidase dimerisation domain FD428_RS20500 PF01546 Peptidase family M20/M25/M40 FD428_RS20505 PF00311 Phosphoenolpyruvate carboxylase FD428_RS20510 PF00884 Sulfatase FD428_RS20515 PF12833 Helix-turn-helix domain FD428_RS20520 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS20525 PF04055 Radical SAM superfamily FD428_RS20530 PF01228 Glycine radical FD428_RS20530 PF02901 Pyruvate formate lyase-like FD428_RS20535 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit FD428_RS20545 PF00391 PEP-utilising enzyme, mobile domain FD428_RS20545 PF05524 PEP-utilising enzyme, N-terminal FD428_RS20545 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 FD428_RS20545 PF00381 PTS HPr component phosphorylation site FD428_RS20545 PF02896 PEP-utilising enzyme, TIM barrel domain FD428_RS20550 PF00923 Transaldolase/Fructose-6-phosphate aldolase FD428_RS20555 PF00465 Iron-containing alcohol dehydrogenase FD428_RS20560 PF00141 Peroxidase FD428_RS20565 PF02219 Methylenetetrahydrofolate reductase FD428_RS20570 PF03466 LysR substrate binding domain FD428_RS20570 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS20580 PF00742 Homoserine dehydrogenase FD428_RS20580 PF00696 Amino acid kinase family FD428_RS20580 PF03447 Homoserine dehydrogenase, NAD binding domain FD428_RS20585 PF01053 Cys/Met metabolism PLP-dependent enzyme FD428_RS20590 PF01340 Met Apo-repressor, MetJ FD428_RS20595 PF01197 Ribosomal protein L31 FD428_RS20600 PF00270 DEAD/DEAH box helicase FD428_RS20600 PF00271 Helicase conserved C-terminal domain FD428_RS20600 PF17764 3′ DNA-binding domain (3′BD) FD428_RS20600 PF18074 Primosomal protein N C-terminal domain FD428_RS20600 PF18319 PriA DNA helicase Cys-rich region (CRR) domain FD428_RS20605 PF00356 Bacterial regulatory proteins, lacI family FD428_RS20610 PF05036 Sporulation related domain FD428_RS20615 PF00227 Proteasome subunit FD428_RS20620 PF10431 C-terminal, D2-small domain, of ClpB protein FD428_RS20620 PF07724 AAA domain (Cdc48 subfamily) FD428_RS20620 PF00004 ATPase family associated with various cellular activities (AAA) FD428_RS20625 PF01040 UbiA prenyltransferase family FD428_RS20630 PF03737 Aldolase/RraA FD428_RS20635 PF06005 Cell division protein ZapB FD428_RS20640 PF00230 Major intrinsic protein FD428_RS20645 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS20645 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS20650 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded FD428_RS20655 PF00970 Oxidoreductase FAD-binding domain FD428_RS20655 PF00175 Oxidoreductase NAD-binding domain FD428_RS20660 PF05656 Protein of unknown function (DUF805) FD428_RS20665 PF07305 Protein of unknown function (DUF1454) FD428_RS20670 PF00121 Triosephosphate isomerase FD428_RS20680 PF02611 CDP-diacylglycerol pyrophosphatase FD428_RS20690 PF00365 Phosphofructokinase FD428_RS20695 PF01545 Cation efflux family FD428_RS20695 PF16916 Dimerisation domain of Zinc Transporter FD428_RS20700 PF07813 LTXXQ motif family protein FD428_RS20705 PF00072 Response regulator receiver domain FD428_RS20705 PF00486 Transcriptional regulatory protein, C terminal FD428_RS20710 PF16527 Two-component sensor protein CpxA, periplasmic domain FD428_RS20710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS20710 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS20710 PF00672 HAMP domain FD428_RS20715 PF03473 MOSC domain FD428_RS20715 PF03475 3-alpha domain FD428_RS20720 PF00701 Dihydrodipicolinate synthetase family FD428_RS20725 PF03812 2-keto-3-deoxygluconate permease FD428_RS20730 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain FD428_RS20730 PF02777 Iron/manganese superoxide dismutases, C-terminal domain FD428_RS20735 PF06379 L-rhamnose-proton symport protein (RhaT) FD428_RS20740 PF02311 AraC-like ligand binding domain FD428_RS20740 PF12833 Helix-turn-helix domain FD428_RS20745 PF02311 AraC-like ligand binding domain FD428_RS20745 PF12833 Helix-turn-helix domain FD428_RS20750 PF02782 FGGY family of carbohydrate kinases, C-terminal domain FD428_RS20750 PF00370 FGGY family of carbohydrate kinases, N-terminal domain FD428_RS20755 PF06134 L-rhamnose isomerase (RhaA) FD428_RS20760 PF00596 Class II Aldolase and Adducin N-terminal domain FD428_RS20770 PF00465 Iron-containing alcohol dehydrogenase FD428_RS20775 PF05336 L-rhamnose mutarotase FD428_RS20785 PF03591 AzlC protein FD428_RS20800 PF02634 FdhD/NarQ family FD428_RS20810 PF00577 Outer membrane usher protein FD428_RS20810 PF13953 PapC C-terminal domain FD428_RS20810 PF13954 PapC N-terminal domain FD428_RS20815 PF00345 Pili and flagellar-assembly chaperone, PapD N-terminal domain FD428_RS20830 PF13247 4Fe-4S dicluster domain FD428_RS20830 PF09163 Formate dehydrogenase N, transmembrane FD428_RS20835 PF01292 Prokaryotic cytochrome b561 FD428_RS20840 PF04216 Protein involved in formate dehydrogenase formation FD428_RS20855 PF09500 Putative thioesterase (yiiD_Cterm) FD428_RS20855 PF00583 Acetyltransferase (GNAT) family FD428_RS20860 PF02580 D-Tyr-tRNA(Tyr) deacylase FD428_RS20865 PF03631 Virulence factor BrkB FD428_RS20870 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS20875 PF03797 Autotransporter beta-domain FD428_RS20880 PF08220 DeoR-like helix-turn-helix domain FD428_RS20880 PF00455 DeoR C terminal sensor domain FD428_RS20885 PF00294 pfkB family carbohydrate kinase FD428_RS20890 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase FD428_RS20890 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase FD428_RS20895 PF01791 DeoC/LacD family aldolase FD428_RS20905 PF01055 Glycosyl hydrolases family 31 FD428_RS20920 PF06178 Oligogalacturonate-specific porin protein (KdgM) FD428_RS20935 PF00679 Elongation factor G C-terminus FD428_RS20935 PF03144 Elongation factor Tu domain 2 FD428_RS20935 PF00009 Elongation factor Tu GTP binding domain FD428_RS20940 PF00120 Glutamine synthetase, catalytic domain FD428_RS20940 PF03951 Glutamine synthetase, beta-Grasp domain FD428_RS20945 PF00989 PAS fold FD428_RS20945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase FD428_RS20945 PF00512 His Kinase A (phospho-acceptor) domain FD428_RS20950 PF00072 Response regulator receiver domain FD428_RS20950 PF00158 Sigma-54 interaction domain FD428_RS20950 PF02954 Bacterial regulatory protein, Fis family FD428_RS20960 PF04055 Radical SAM superfamily FD428_RS20960 PF06969 HemN C-terminal domain FD428_RS20965 PF04220 Der GTPase activator (YihI) FD428_RS20975 PF01926 50S ribosome-binding GTPase FD428_RS20980 PF00476 DNA polymerase family A FD428_RS20980 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain FD428_RS20980 PF01367 5'-3' exonuclease, C-terminal SAM fold FD428_RS20980 PF01612 3'-5' exonuclease FD428_RS20985 PF01553 Acyltransferase FD428_RS20990 PF01323 DSBA-like thioredoxin domain FD428_RS20995 PF01636 Phosphotransferase enzyme family FD428_RS21000 PF06288 Protein of unknown function (DUF1040) FD428_RS21005 PF12804 MobA-like NTP transferase domain FD428_RS21010 PF03205 Molybdopterin guanine dinucleotide synthesis protein B FD428_RS21035 PF12724 Flavodoxin domain FD428_RS21040 PF02386 Cation transport protein FD428_RS21045 PF01205 Uncharacterized protein family UPF0029 FD428_RS21045 PF09186 Domain of unknown function (DUF1949) FD428_RS21050 PF00557 Metallopeptidase family M24 FD428_RS21055 PF00378 Enoyl-CoA hydratase/isomerase FD428_RS21055 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain FD428_RS21055 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain FD428_RS21060 PF00108 Thiolase, N-terminal domain FD428_RS21060 PF02803 Thiolase, C-terminal domain FD428_RS21065 PF00175 Oxidoreductase NAD-binding domain FD428_RS21065 PF00970 Oxidoreductase FAD-binding domain FD428_RS21070 PF01977 3-octaprenyl-4-hydroxybenzoate carboxy-lyase FD428_RS21075 PF02357 Transcription termination factor nusG FD428_RS21080 PF01026 TatD related DNase FD428_RS21085 PF00902 Sec-independent protein translocase protein (TatC) FD428_RS21095 PF02416 mttA/Hcf106 family FD428_RS21100 PF03109 ABC1 family FD428_RS21105 PF02036 SCP-2 sterol transfer family FD428_RS21110 PF01209 ubiE/COQ5 methyltransferase family FD428_RS21115 PF02646 RmuC family FD428_RS21120 PF01048 Phosphorylase superfamily FD428_RS21125 PF01738 Dienelactone hydrolase family FD428_RS21130 PF01717 Cobalamin-independent synthase, Catalytic domain FD428_RS21130 PF08267 Cobalamin-independent synthase, N-terminal domain FD428_RS21135 PF03466 LysR substrate binding domain FD428_RS21135 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS21140 PF00892 EamA-like transporter family FD428_RS21155 PF01810 LysE type translocator FD428_RS21160 PF04754 Putative transposase, YhgA-like FD428_RS21165 PF01810 LysE type translocator FD428_RS21170 PF00270 DEAD/DEAH box helicase FD428_RS21170 PF00271 Helicase conserved C-terminal domain FD428_RS21170 PF00570 HRDC domain FD428_RS21170 PF16124 RecQ zinc-binding FD428_RS21170 PF09382 RQC domain FD428_RS21175 PF02253 Phospholipase A1 FD428_RS21180 PF03061 Thioesterase superfamily FD428_RS21185 PF00892 EamA-like transporter family FD428_RS21190 PF01544 CorA-like Mg2+ transporter protein FD428_RS21195 PF13361 UvrD-like helicase C-terminal domain FD428_RS21195 PF00580 UvrD/REP helicase N-terminal domain FD428_RS21200 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS21205 PF02899 Phage integrase, N-terminal SAM-like domain FD428_RS21205 PF00589 Phage integrase family FD428_RS21210 PF04340 Protein of unknown function, DUF484 FD428_RS21215 PF01678 Diaminopimelate epimerase FD428_RS21220 PF13627 Prokaryotic lipoprotein-attachment site FD428_RS21225 PF01491 Frataxin-like domain FD428_RS21230 PF01295 Adenylate cyclase, class-I FD428_RS21230 PF12633 Adenylate cyclase NT domain FD428_RS21235 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain FD428_RS21235 PF03900 Porphobilinogen deaminase, C-terminal domain FD428_RS21240 PF02602 Uroporphyrinogen-III synthase HemD FD428_RS21245 PF04375 HemX, putative uroporphyrinogen-III C-methyltransferase FD428_RS21250 PF07219 HemY protein N-terminus FD428_RS21250 PF07719 Tetratricopeptide repeat FD428_RS21275 PF00324 Amino acid permease FD428_RS21280 PF03808 Glycosyl transferase WecB/TagA/CpsF family FD428_RS21285 PF06899 WzyE protein, O-antigen assembly polymerase FD428_RS21290 PF07429 4-alpha-L-fucosyltransferase glycosyl transferase group 56 FD428_RS21295 PF01943 Polysaccharide biosynthesis protein FD428_RS21300 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family FD428_RS21310 PF00483 Nucleotidyl transferase FD428_RS21315 PF16363 GDP-mannose 4,6 dehydratase FD428_RS21320 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain FD428_RS21320 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain FD428_RS21320 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain FD428_RS21325 PF02350 UDP-N-acetylglucosamine 2-epimerase FD428_RS21330 PF02706 Chain length determinant protein FD428_RS21335 PF00953 Glycosyl transferase family 4 FD428_RS21340 PF07498 Rho termination factor, N-terminal domain FD428_RS21340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD428_RS21340 PF07497 Rho termination factor, RNA-binding domain FD428_RS21345 PF00085 Thioredoxin FD428_RS21350 PF00271 Helicase conserved C-terminal domain FD428_RS21350 PF00270 DEAD/DEAH box helicase FD428_RS21355 PF02541 Ppx/GppA phosphatase family FD428_RS21360 PF00580 UvrD/REP helicase N-terminal domain FD428_RS21360 PF13361 UvrD-like helicase C-terminal domain FD428_RS21365 PF04973 Nicotinamide mononucleotide transporter FD428_RS21370 PF01048 Phosphorylase superfamily FD428_RS21385 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain FD428_RS21385 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain FD428_RS21390 PF03466 LysR substrate binding domain FD428_RS21390 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS21395 PF00585 C-terminal regulatory domain of Threonine dehydratase FD428_RS21395 PF00291 Pyridoxal-phosphate dependent enzyme FD428_RS21400 PF00920 Dehydratase family FD428_RS21405 PF01063 Amino-transferase class IV FD428_RS21415 PF00205 Thiamine pyrophosphate enzyme, central domain FD428_RS21415 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain FD428_RS21415 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain FD428_RS21420 PF08046 IlvGEDA operon leader peptide FD428_RS21425 PF01078 Magnesium chelatase, subunit ChlI FD428_RS21425 PF13335 Magnesium chelatase, subunit ChlI C-terminal FD428_RS21430 PF04219 Protein of unknown function, DUF FD428_RS21435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS21435 PF03466 LysR substrate binding domain FD428_RS21475 PF00392 Bacterial regulatory proteins, gntR family FD428_RS21475 PF07729 FCD domain FD428_RS21480 PF07690 Major Facilitator Superfamily FD428_RS21485 PF00356 Bacterial regulatory proteins, lacI family FD428_RS21490 PF00294 pfkB family carbohydrate kinase FD428_RS21495 PF13407 Periplasmic binding protein domain FD428_RS21500 PF02653 Branched-chain amino acid transport system / permease component FD428_RS21505 PF00005 ABC transporter FD428_RS21510 PF05025 RbsD / FucU transport protein family FD428_RS21515 PF02705 K+ potassium transporter FD428_RS21520 PF07728 AAA domain (dynein-related subfamily) FD428_RS21520 PF17868 AAA lid domain FD428_RS21520 PF12592 Protein of unknown function (DUF3763) FD428_RS21525 PF05762 VWA domain containing CoxE-like protein FD428_RS21530 PF03590 Aspartate-ammonia ligase FD428_RS21535 PF01037 Lrp/AsnC ligand binding domain FD428_RS21540 PF00258 Flavodoxin FD428_RS21545 PF01134 Glucose inhibited division protein A FD428_RS21545 PF13932 GidA associated domain FD428_RS21550 PF02527 rRNA small subunit methyltransferase G FD428_RS21555 PF03899 ATP synthase I chain FD428_RS21560 PF00119 ATP synthase A chain FD428_RS21565 PF00137 ATP synthase subunit C FD428_RS21570 PF00430 ATP synthase B/B' CF(0) FD428_RS21575 PF00213 ATP synthase delta (OSCP) subunit FD428_RS21580 PF00306 ATP synthase alpha/beta chain, C terminal domain FD428_RS21580 PF02874 ATP synthase alpha/beta family, beta-barrel domain FD428_RS21580 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD428_RS21585 PF00231 ATP synthase FD428_RS21590 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain FD428_RS21590 PF02874 ATP synthase alpha/beta family, beta-barrel domain FD428_RS21595 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain FD428_RS21595 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain FD428_RS21600 PF12804 MobA-like NTP transferase domain FD428_RS21600 PF14602 Hexapeptide repeat of succinyl-transferase FD428_RS21600 PF00132 Bacterial transferase hexapeptide (six repeats) FD428_RS21605 PF01380 SIS domain FD428_RS21610 PF12849 PBP superfamily domain FD428_RS21615 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS21620 PF00528 Binding-protein-dependent transport system inner membrane component FD428_RS21625 PF00005 ABC transporter FD428_RS21630 PF01895 PhoU domain FD428_RS21635 PF13419 Haloacid dehalogenase-like hydrolase FD428_RS21640 PF00860 Permease family FD428_RS21645 PF03358 NADPH-dependent FMN reductase FD428_RS21655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family FD428_RS21655 PF03466 LysR substrate binding domain FD428_RS21660 PF07690 Major Facilitator Superfamily FD428_RS21670 PF12631 MnmE helical domain FD428_RS21670 PF10396 GTP-binding protein TrmE N-terminus FD428_RS21670 PF01926 50S ribosome-binding GTPase FD428_RS21675 PF14849 YidC periplasmic domain FD428_RS21675 PF02096 60Kd inner membrane protein FD428_RS21680 PF01809 Putative membrane protein insertion efficiency factor FD428_RS21685 PF00825 Ribonuclease P FD428_RS21690 PF00468 Ribosomal protein L34