CMS_RS00005 PF00308 Bacterial dnaA protein CMS_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CMS_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CMS_RS00010 PF02767 DNA polymerase III beta subunit, central domain CMS_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CMS_RS00020 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CMS_RS00020 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CMS_RS00025 PF02463 RecF/RecN/SMC N terminal domain CMS_RS00030 PF05258 CMS_RS00030 CMS_RS00035 PF00204 DNA gyrase B CMS_RS00035 PF00986 DNA gyrase B subunit, carboxyl terminus CMS_RS00035 PF01751 Toprim domain CMS_RS00035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS00040 PF00521 DNA gyrase/topoisomerase IV, subunit A CMS_RS00040 PF03989 DNA gyrase C-terminal domain, beta-propeller CMS_RS00045 PF12089 CMS_RS00045 CMS_RS00065 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CMS_RS00070 PF01694 Rhomboid family CMS_RS00075 PF06781 CMS_RS00075 CMS_RS00080 PF04203 Sortase family CMS_RS00090 PF00117 Glutamine amidotransferase class-I CMS_RS00095 PF00069 Protein kinase domain CMS_RS00095 PF03793 PASTA domain CMS_RS00100 PF00069 Protein kinase domain CMS_RS00105 PF00905 Penicillin binding protein transpeptidase domain CMS_RS00110 PF01098 CMS_RS00110 CMS_RS00115 PF13672 Protein phosphatase 2C CMS_RS00120 PF16697 CMS_RS00120 CMS_RS00125 PF12401 Protein of unknown function (DUF2662) CMS_RS00125 PF16697 CMS_RS00125 CMS_RS00135 PF09924 Uncharacterized conserved protein (DUF2156) CMS_RS00145 PF00072 Response regulator receiver domain CMS_RS00145 PF00196 Bacterial regulatory proteins, luxR family CMS_RS00150 PF07730 Histidine kinase CMS_RS00160 PF00444 Ribosomal protein L36 CMS_RS00165 PF07683 Cobalamin synthesis protein cobW C-terminal domain CMS_RS00170 PF00270 DEAD/DEAH box helicase CMS_RS00170 PF00271 Helicase conserved C-terminal domain CMS_RS00170 PF12073 CMS_RS00170 CMS_RS00170 PF16124 CMS_RS00170 CMS_RS00180 PF05593 CMS_RS00180 CMS_RS00195 PF01741 Large-conductance mechanosensitive channel, MscL CMS_RS00205 PF01812 5-formyltetrahydrofolate cyclo-ligase family CMS_RS00210 PF00483 Nucleotidyl transferase CMS_RS00215 PF13302 Acetyltransferase (GNAT) domain CMS_RS00235 PF05175 Methyltransferase small domain CMS_RS00240 PF11255 CMS_RS00240 CMS_RS00250 PF00356 Bacterial regulatory proteins, lacI family CMS_RS00250 PF13377 Periplasmic binding protein-like domain CMS_RS00255 PF13416 Bacterial extracellular solute-binding protein CMS_RS00260 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS00265 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS00270 PF06964 Alpha-L-arabinofuranosidase C-terminus CMS_RS00275 PF00665 Integrase core domain CMS_RS00275 PF13936 Helix-turn-helix domain CMS_RS00280 PF00270 DEAD/DEAH box helicase CMS_RS00280 PF00271 Helicase conserved C-terminal domain CMS_RS00280 PF00570 HRDC domain CMS_RS00280 PF09382 RQC domain CMS_RS00280 PF16124 CMS_RS00280 CMS_RS00285 PF07944 Putative glycosyl hydrolase of unknown function (DUF1680) CMS_RS00290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMS_RS00295 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS00300 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS00305 PF00005 ABC transporter CMS_RS00305 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CMS_RS00310 PF00005 ABC transporter CMS_RS00310 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CMS_RS00315 PF00561 alpha/beta hydrolase fold CMS_RS00320 PF00557 Metallopeptidase family M24 CMS_RS00320 PF05195 Aminopeptidase P, N-terminal domain CMS_RS00325 PF01266 FAD dependent oxidoreductase CMS_RS00330 PF13510 2Fe-2S iron-sulfur cluster binding domain CMS_RS00335 PF04324 BFD-like [2Fe-2S] binding domain CMS_RS00335 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS00340 PF00701 Dihydrodipicolinate synthetase family CMS_RS00345 PF05544 Proline racemase CMS_RS00350 PF00171 Aldehyde dehydrogenase family CMS_RS00355 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS00355 PF01756 Acyl-CoA oxidase CMS_RS00355 PF02770 Acyl-CoA dehydrogenase, middle domain CMS_RS00365 PF07081 Protein of unknown function (DUF1349) CMS_RS00370 PF02452 PemK-like protein CMS_RS00385 PF00561 alpha/beta hydrolase fold CMS_RS00390 PF01467 Cytidylyltransferase CMS_RS00395 PF07602 CMS_RS00395 CMS_RS00395 PF13229 Right handed beta helix region CMS_RS00400 PF13229 Right handed beta helix region CMS_RS00405 PF02397 CMS_RS00405 CMS_RS00405 PF13727 CoA-binding domain CMS_RS00410 PF09314 CMS_RS00410 CMS_RS00420 PF13439 Glycosyltransferase Family 4 CMS_RS00420 PF13692 Glycosyl transferases group 1 CMS_RS00430 PF00665 Integrase core domain CMS_RS00430 PF13011 CMS_RS00430 CMS_RS00435 PF00331 Glycosyl hydrolase family 10 CMS_RS00440 PF01370 NAD dependent epimerase/dehydratase family CMS_RS00450 PF01047 MarR family CMS_RS00455 PF09844 CMS_RS00455 CMS_RS00460 PF00723 Glycosyl hydrolases family 15 CMS_RS00465 PF01661 Macro domain CMS_RS00485 PF01551 Peptidase family M23 CMS_RS00490 PF00877 NlpC/P60 family CMS_RS00495 PF00719 Inorganic pyrophosphatase CMS_RS00500 PF01171 PP-loop family CMS_RS00500 PF09179 TilS substrate binding domain CMS_RS00505 PF00156 Phosphoribosyl transferase domain CMS_RS00510 PF00004 ATPase family associated with various cellular activities (AAA) CMS_RS00510 PF01434 Peptidase family M41 CMS_RS00515 PF01227 GTP cyclohydrolase I CMS_RS00520 PF00809 Pterin binding enzyme CMS_RS00530 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CMS_RS00530 PF02152 Dihydroneopterin aldolase CMS_RS00535 PF11377 CMS_RS00535 CMS_RS00540 PF03703 CMS_RS00540 CMS_RS00545 PF03703 CMS_RS00545 CMS_RS00550 PF10727 Rossmann-like domain CMS_RS00550 PF10728 Domain of unknown function (DUF2520) CMS_RS00555 PF02569 Pantoate-beta-alanine ligase CMS_RS00560 PF00152 tRNA synthetases class II (D, K and N) CMS_RS00560 PF01336 OB-fold nucleic acid binding domain CMS_RS00570 PF00004 ATPase family associated with various cellular activities (AAA) CMS_RS00570 PF02151 UvrB/uvrC motif CMS_RS00570 PF02861 Clp amino terminal domain CMS_RS00570 PF07724 AAA domain (Cdc48 subfamily) CMS_RS00570 PF10431 C-terminal, D2-small domain, of ClpB protein CMS_RS00575 PF01370 NAD dependent epimerase/dehydratase family CMS_RS00580 PF00248 Aldo/keto reductase family CMS_RS00585 PF00466 Ribosomal protein L10 CMS_RS00590 PF00542 Ribosomal protein L7/L12 C-terminal domain CMS_RS00590 PF16320 CMS_RS00590 CMS_RS00595 PF00196 Bacterial regulatory proteins, luxR family CMS_RS00600 PF12802 MarR family CMS_RS00605 PF07690 Major Facilitator Superfamily CMS_RS00610 PF00356 Bacterial regulatory proteins, lacI family CMS_RS00610 PF13377 Periplasmic binding protein-like domain CMS_RS00615 PF01547 Bacterial extracellular solute-binding protein CMS_RS00620 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS00625 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS00630 PF00005 ABC transporter CMS_RS00630 PF00664 ABC transporter transmembrane region CMS_RS00635 PF03713 Domain of unknown function (DUF305) CMS_RS00640 PF11303 CMS_RS00640 CMS_RS00645 PF00291 Pyridoxal-phosphate dependent enzyme CMS_RS00645 PF00571 CBS domain CMS_RS00650 PF01053 Cys/Met metabolism PLP-dependent enzyme CMS_RS00655 PF00075 RNase H CMS_RS00655 PF01402 Ribbon-helix-helix protein, copG family CMS_RS00660 PF00356 Bacterial regulatory proteins, lacI family CMS_RS00660 PF13377 Periplasmic binding protein-like domain CMS_RS00665 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CMS_RS00665 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CMS_RS00670 PF00596 Class II Aldolase and Adducin N-terminal domain CMS_RS00675 PF02610 L-arabinose isomerase CMS_RS00675 PF11762 L-arabinose isomerase C-terminal domain CMS_RS00680 PF13407 Periplasmic binding protein domain CMS_RS00685 PF00005 ABC transporter CMS_RS00690 PF02653 CMS_RS00690 CMS_RS00705 PF01381 Helix-turn-helix CMS_RS00715 PF01261 Xylose isomerase-like TIM barrel CMS_RS00720 PF00232 Glycosyl hydrolase family 1 CMS_RS00725 PF13302 Acetyltransferase (GNAT) domain CMS_RS00730 PF01047 MarR family CMS_RS00735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS00735 PF03466 LysR substrate binding domain CMS_RS00740 PF00266 Aminotransferase class-V CMS_RS00745 PF07690 Major Facilitator Superfamily CMS_RS00750 PF07786 CMS_RS00750 CMS_RS00755 PF04655 Aminoglycoside/hydroxyurea antibiotic resistance kinase CMS_RS00770 PF00196 Bacterial regulatory proteins, luxR family CMS_RS00775 PF13460 NADH(P)-binding CMS_RS00780 PF01515 Phosphate acetyl/butaryl transferase CMS_RS00780 PF07085 DRTGG domain CMS_RS00780 PF13500 AAA domain CMS_RS00785 PF00871 Acetokinase family CMS_RS00800 PF05090 CMS_RS00800 CMS_RS00805 PF12169 DNA polymerase III subunits gamma and tau domain III CMS_RS00805 PF13177 DNA polymerase III, delta subunit CMS_RS00810 PF02132 RecR protein CMS_RS00810 PF13662 Toprim domain CMS_RS00815 PF00696 Amino acid kinase family CMS_RS00815 PF01842 ACT domain CMS_RS00815 PF13840 ACT domain CMS_RS00820 PF01118 Semialdehyde dehydrogenase, NAD binding domain CMS_RS00820 PF02774 Semialdehyde dehydrogenase, dimerisation domain CMS_RS00825 PF06039 CMS_RS00825 CMS_RS00840 PF00265 Thymidine kinase CMS_RS00845 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CMS_RS00845 PF02706 Chain length determinant protein CMS_RS00855 PF13196 CMS_RS00855 CMS_RS00870 PF04892 CMS_RS00870 CMS_RS00875 PF00296 Luciferase-like monooxygenase CMS_RS00880 PF00905 Penicillin binding protein transpeptidase domain CMS_RS00880 PF00912 Transglycosylase CMS_RS00885 PF01757 CMS_RS00885 CMS_RS00900 PF00149 Calcineurin-like phosphoesterase CMS_RS00905 PF00905 Penicillin binding protein transpeptidase domain CMS_RS00905 PF00912 Transglycosylase CMS_RS00905 PF03793 PASTA domain CMS_RS00915 PF14588 YjgF/chorismate_mutase-like, putative endoribonuclease CMS_RS00920 PF00501 AMP-binding enzyme CMS_RS00920 PF13193 AMP-binding enzyme C-terminal domain CMS_RS00920 PF16177 CMS_RS00920 CMS_RS00925 PF00437 Type II/IV secretion system protein CMS_RS00930 PF00482 Type II secretion system (T2SS), protein F CMS_RS00950 PF01131 DNA topoisomerase CMS_RS00950 PF01751 Toprim domain CMS_RS00950 PF13368 CMS_RS00950 CMS_RS00955 PF02223 Thymidylate kinase CMS_RS00960 PF13177 DNA polymerase III, delta subunit CMS_RS00965 PF00561 alpha/beta hydrolase fold CMS_RS00975 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CMS_RS00980 PF00857 Isochorismatase family CMS_RS00985 PF00171 Aldehyde dehydrogenase family CMS_RS00990 PF00588 SpoU rRNA Methylase family CMS_RS00995 PF11196 CMS_RS00995 CMS_RS01000 PF00005 ABC transporter CMS_RS01000 PF00664 ABC transporter transmembrane region CMS_RS01005 PF00005 ABC transporter CMS_RS01010 PF01061 CMS_RS01010 CMS_RS01020 PF07690 Major Facilitator Superfamily CMS_RS01025 PF00294 pfkB family carbohydrate kinase CMS_RS01035 PF01381 Helix-turn-helix CMS_RS01060 PF00083 Sugar (and other) transporter CMS_RS01065 PF00083 Sugar (and other) transporter CMS_RS01080 PF00583 Acetyltransferase (GNAT) family CMS_RS01085 PF01370 NAD dependent epimerase/dehydratase family CMS_RS01090 PF04229 GrpB protein CMS_RS01095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CMS_RS01105 PF03537 Glycoside-hydrolase family GH114 CMS_RS01110 PF00665 Integrase core domain CMS_RS01110 PF13011 CMS_RS01110 CMS_RS01115 PF04266 ASCH domain CMS_RS01120 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS01130 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS01130 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS01130 PF08448 PAS fold CMS_RS01140 PF00072 Response regulator receiver domain CMS_RS01140 PF00486 Transcriptional regulatory protein, C terminal CMS_RS01150 PF03372 Endonuclease/Exonuclease/phosphatase family CMS_RS01160 PF03780 CMS_RS01160 CMS_RS01165 PF04542 Sigma-70 region 2 CMS_RS01165 PF08281 Sigma-70, region 4 CMS_RS01170 PF03780 CMS_RS01170 CMS_RS01175 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CMS_RS01175 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CMS_RS01180 PF00156 Phosphoribosyl transferase domain CMS_RS01185 PF13845 CMS_RS01185 CMS_RS01190 PF07690 Major Facilitator Superfamily CMS_RS01195 PF05977 Transmembrane secretion effector CMS_RS01200 PF13242 HAD-hyrolase-like CMS_RS01200 PF13344 Haloacid dehalogenase-like hydrolase CMS_RS01205 PF00149 Calcineurin-like phosphoesterase CMS_RS01210 PF05532 CsbD-like CMS_RS01215 PF13396 CMS_RS01215 CMS_RS01220 PF00270 DEAD/DEAH box helicase CMS_RS01220 PF00271 Helicase conserved C-terminal domain CMS_RS01225 PF01555 DNA methylase CMS_RS01235 PF13828 CMS_RS01235 CMS_RS01240 PF00266 Aminotransferase class-V CMS_RS01245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS01250 PF00534 Glycosyl transferases group 1 CMS_RS01255 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CMS_RS01265 PF14403 CMS_RS01265 CMS_RS01270 PF04168 CMS_RS01270 CMS_RS01275 PF01841 Transglutaminase-like superfamily CMS_RS01275 PF08379 CMS_RS01275 CMS_RS01285 PF00583 Acetyltransferase (GNAT) family CMS_RS01305 PF00082 Subtilase family CMS_RS01305 PF09286 Pro-kumamolisin, activation domain CMS_RS01315 PF00440 Bacterial regulatory proteins, tetR family CMS_RS01320 PF04185 Phosphoesterase family CMS_RS01320 PF05506 CMS_RS01320 CMS_RS01325 PF13532 2OG-Fe(II) oxygenase superfamily CMS_RS01335 PF00665 Integrase core domain CMS_RS01335 PF13011 CMS_RS01335 CMS_RS01340 PF00753 Metallo-beta-lactamase superfamily CMS_RS01345 PF00562 RNA polymerase Rpb2, domain 6 CMS_RS01345 PF04560 RNA polymerase Rpb2, domain 7 CMS_RS01345 PF04561 RNA polymerase Rpb2, domain 2 CMS_RS01345 PF04563 RNA polymerase beta subunit CMS_RS01345 PF04565 RNA polymerase Rpb2, domain 3 CMS_RS01345 PF10385 RNA polymerase beta subunit external 1 domain CMS_RS01350 PF00623 RNA polymerase Rpb1, domain 2 CMS_RS01350 PF04983 RNA polymerase Rpb1, domain 3 CMS_RS01350 PF04997 RNA polymerase Rpb1, domain 1 CMS_RS01350 PF04998 RNA polymerase Rpb1, domain 5 CMS_RS01350 PF05000 RNA polymerase Rpb1, domain 4 CMS_RS01360 PF00497 Bacterial extracellular solute-binding proteins, family 3 CMS_RS01365 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS01370 PF00005 ABC transporter CMS_RS01385 PF00164 Ribosomal protein S12/S23 CMS_RS01390 PF00177 Ribosomal protein S7p/S5e CMS_RS01395 PF00009 Elongation factor Tu GTP binding domain CMS_RS01395 PF00679 Elongation factor G C-terminus CMS_RS01395 PF03144 Elongation factor Tu domain 2 CMS_RS01395 PF03764 Elongation factor G, domain IV CMS_RS01395 PF14492 Elongation Factor G, domain II CMS_RS01400 PF00009 Elongation factor Tu GTP binding domain CMS_RS01400 PF03143 Elongation factor Tu C-terminal domain CMS_RS01400 PF03144 Elongation factor Tu domain 2 CMS_RS01405 PF01028 Eukaryotic DNA topoisomerase I, catalytic core CMS_RS01410 PF00338 Ribosomal protein S10p/S20e CMS_RS01415 PF00297 Ribosomal protein L3 CMS_RS01420 PF00573 Ribosomal protein L4/L1 family CMS_RS01425 PF00276 Ribosomal protein L23 CMS_RS01430 PF00181 Ribosomal Proteins L2, RNA binding domain CMS_RS01430 PF03947 Ribosomal Proteins L2, C-terminal domain CMS_RS01435 PF00203 Ribosomal protein S19 CMS_RS01440 PF00237 Ribosomal protein L22p/L17e CMS_RS01445 PF00189 Ribosomal protein S3, C-terminal domain CMS_RS01445 PF07650 KH domain CMS_RS01450 PF00252 Ribosomal protein L16p/L10e CMS_RS01455 PF00831 Ribosomal L29 protein CMS_RS01460 PF00366 Ribosomal protein S17 CMS_RS01465 PF00238 Ribosomal protein L14p/L23e CMS_RS01470 PF17136 CMS_RS01470 CMS_RS01475 PF00281 Ribosomal protein L5 CMS_RS01475 PF00673 ribosomal L5P family C-terminus CMS_RS01480 PF00410 Ribosomal protein S8 CMS_RS01485 PF00347 Ribosomal protein L6 CMS_RS01490 PF00861 Ribosomal L18p/L5e family CMS_RS01495 PF00333 Ribosomal protein S5, N-terminal domain CMS_RS01495 PF03719 Ribosomal protein S5, C-terminal domain CMS_RS01500 PF00327 Ribosomal protein L30p/L7e CMS_RS01505 PF00828 Ribosomal protein L18e/L15 CMS_RS01510 PF00344 SecY translocase CMS_RS01515 PF00406 Adenylate kinase CMS_RS01520 PF00557 Metallopeptidase family M24 CMS_RS01525 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CMS_RS01525 PF00874 PRD domain CMS_RS01525 PF08279 HTH domain CMS_RS01530 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CMS_RS01535 PF00381 PTS HPr component phosphorylation site CMS_RS01540 PF00391 PEP-utilising enzyme, mobile domain CMS_RS01540 PF02896 PEP-utilising enzyme, TIM barrel domain CMS_RS01540 PF05524 PEP-utilising enzyme, N-terminal CMS_RS01545 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CMS_RS01545 PF02378 Phosphotransferase system, EIIC CMS_RS01550 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CMS_RS01555 PF01232 Mannitol dehydrogenase Rossmann domain CMS_RS01555 PF08125 Mannitol dehydrogenase C-terminal domain CMS_RS01560 PF01176 Translation initiation factor 1A / IF-1 CMS_RS01565 PF00444 Ribosomal protein L36 CMS_RS01570 PF00416 Ribosomal protein S13/S18 CMS_RS01575 PF00411 Ribosomal protein S11 CMS_RS01580 PF01000 RNA polymerase Rpb3/RpoA insert domain CMS_RS01580 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CMS_RS01580 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CMS_RS01585 PF01196 Ribosomal protein L17 CMS_RS01590 PF00583 Acetyltransferase (GNAT) family CMS_RS01595 PF01416 tRNA pseudouridine synthase CMS_RS01600 PF00572 Ribosomal protein L13 CMS_RS01605 PF00380 Ribosomal protein S9/S16 CMS_RS01610 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CMS_RS01610 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CMS_RS01610 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CMS_RS01610 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CMS_RS01615 PF00665 Integrase core domain CMS_RS01615 PF13011 CMS_RS01615 CMS_RS01625 PF08922 Domain of unknown function (DUF1905) CMS_RS01625 PF13376 CMS_RS01625 CMS_RS01630 PF13443 Cro/C1-type HTH DNA-binding domain CMS_RS01640 PF04940 Sensors of blue-light using FAD CMS_RS01660 PF00704 Glycosyl hydrolases family 18 CMS_RS01675 PF00005 ABC transporter CMS_RS01680 PF01497 Periplasmic binding protein CMS_RS01685 PF01032 FecCD transport family CMS_RS01690 PF07730 Histidine kinase CMS_RS01695 PF00072 Response regulator receiver domain CMS_RS01695 PF00196 Bacterial regulatory proteins, luxR family CMS_RS01700 PF12158 CMS_RS01700 CMS_RS01710 PF14552 Tautomerase enzyme CMS_RS01715 PF00583 Acetyltransferase (GNAT) family CMS_RS01725 PF00753 Metallo-beta-lactamase superfamily CMS_RS01725 PF07521 RNA-metabolising metallo-beta-lactamase CMS_RS01730 PF00916 CMS_RS01730 CMS_RS01730 PF01740 STAS domain CMS_RS01740 PF00171 Aldehyde dehydrogenase family CMS_RS01755 PF00155 Aminotransferase class I and II CMS_RS01760 PF01717 Cobalamin-independent synthase, Catalytic domain CMS_RS01765 PF01053 Cys/Met metabolism PLP-dependent enzyme CMS_RS01770 PF02661 Fic/DOC family CMS_RS01775 PF00440 Bacterial regulatory proteins, tetR family CMS_RS01780 PF07690 Major Facilitator Superfamily CMS_RS01785 PF12697 Alpha/beta hydrolase family CMS_RS01790 PF00440 Bacterial regulatory proteins, tetR family CMS_RS01790 PF13305 WHG domain CMS_RS01800 PF00440 Bacterial regulatory proteins, tetR family CMS_RS01805 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS01815 PF01547 Bacterial extracellular solute-binding protein CMS_RS01820 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS01825 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS01840 PF00703 Glycosyl hydrolases family 2 CMS_RS01840 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CMS_RS01840 PF02837 Glycosyl hydrolases family 2, sugar binding domain CMS_RS01850 PF03176 MMPL family CMS_RS01855 PF00440 Bacterial regulatory proteins, tetR family CMS_RS01855 PF16859 CMS_RS01855 CMS_RS01865 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS01870 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS01880 PF00296 Luciferase-like monooxygenase CMS_RS01885 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS01890 PF02770 Acyl-CoA dehydrogenase, middle domain CMS_RS01890 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CMS_RS01890 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS01895 PF01569 PAP2 superfamily CMS_RS01905 PF00472 RF-1 domain CMS_RS01920 PF09966 Uncharacterized protein conserved in bacteria (DUF2200) CMS_RS01925 PF00440 Bacterial regulatory proteins, tetR family CMS_RS01930 PF00107 Zinc-binding dehydrogenase CMS_RS01930 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS01935 PF00665 Integrase core domain CMS_RS01935 PF13011 CMS_RS01935 CMS_RS01950 PF00881 Nitroreductase family CMS_RS01960 PF00144 Beta-lactamase CMS_RS01965 PF01569 PAP2 superfamily CMS_RS01970 PF01425 Amidase CMS_RS01975 PF04024 CMS_RS01975 CMS_RS01980 PF03861 ANTAR domain CMS_RS01985 PF04539 Sigma-70 region 3 CMS_RS01985 PF04542 Sigma-70 region 2 CMS_RS01985 PF04545 Sigma-70, region 4 CMS_RS01990 PF13520 Amino acid permease CMS_RS01995 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CMS_RS01995 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CMS_RS02000 PF00270 DEAD/DEAH box helicase CMS_RS02000 PF00271 Helicase conserved C-terminal domain CMS_RS02000 PF06224 CMS_RS02000 CMS_RS02000 PF08494 CMS_RS02000 CMS_RS02005 PF02230 Phospholipase/Carboxylesterase CMS_RS02010 PF16262 CMS_RS02010 CMS_RS02015 PF00440 Bacterial regulatory proteins, tetR family CMS_RS02020 PF00270 DEAD/DEAH box helicase CMS_RS02020 PF00271 Helicase conserved C-terminal domain CMS_RS02025 PF07920 Protein of unknown function (DUF1684) CMS_RS02035 PF01878 EVE domain CMS_RS02040 PF04029 2-phosphosulpholactate phosphatase CMS_RS02045 PF04248 Domain of unknown function (DUF427) CMS_RS02050 PF07336 Protein of unknown function (DUF1470) CMS_RS02050 PF11706 CGNR zinc finger CMS_RS02055 PF10263 CMS_RS02055 CMS_RS02065 PF07995 Glucose / Sorbosone dehydrogenase CMS_RS02075 PF00665 Integrase core domain CMS_RS02075 PF13011 CMS_RS02075 CMS_RS02080 PF03099 Biotin/lipoate A/B protein ligase family CMS_RS02085 PF14542 GCN5-related N-acetyl-transferase CMS_RS02090 PF01833 IPT/TIG domain CMS_RS02090 PF12671 CMS_RS02090 CMS_RS02095 PF10990 CMS_RS02095 CMS_RS02100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CMS_RS02100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CMS_RS02100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CMS_RS02100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CMS_RS02105 PF00800 Prephenate dehydratase CMS_RS02105 PF01842 ACT domain CMS_RS02110 PF13520 Amino acid permease CMS_RS02115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMS_RS02115 PF02403 Seryl-tRNA synthetase N-terminal domain CMS_RS02120 PF08282 haloacid dehalogenase-like hydrolase CMS_RS02130 PF03816 Cell envelope-related transcriptional attenuator domain CMS_RS02145 PF00665 Integrase core domain CMS_RS02145 PF13011 CMS_RS02145 CMS_RS02150 PF00356 Bacterial regulatory proteins, lacI family CMS_RS02150 PF13377 Periplasmic binding protein-like domain CMS_RS02155 PF06283 Trehalose utilisation CMS_RS02160 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS02170 PF00128 Alpha amylase, catalytic domain CMS_RS02180 PF00196 Bacterial regulatory proteins, luxR family CMS_RS02190 PF03551 Transcriptional regulator PadR-like family CMS_RS02200 PF02096 60Kd inner membrane protein CMS_RS02215 PF00665 Integrase core domain CMS_RS02215 PF13011 CMS_RS02215 CMS_RS02220 PF00248 Aldo/keto reductase family CMS_RS02225 PF01553 Acyltransferase CMS_RS02230 PF02261 Aspartate decarboxylase CMS_RS02235 PF03631 CMS_RS02235 CMS_RS02240 PF00875 DNA photolyase CMS_RS02240 PF03441 FAD binding domain of DNA photolyase CMS_RS02265 PF06271 CMS_RS02265 CMS_RS02270 PF13472 GDSL-like Lipase/Acylhydrolase family CMS_RS02275 PF00072 Response regulator receiver domain CMS_RS02275 PF00486 Transcriptional regulatory protein, C terminal CMS_RS02285 PF02669 CMS_RS02285 CMS_RS02290 PF00122 E1-E2 ATPase CMS_RS02290 PF00702 haloacid dehalogenase-like hydrolase CMS_RS02295 PF03814 CMS_RS02295 CMS_RS02300 PF09604 CMS_RS02300 CMS_RS02315 PF07804 HipA-like C-terminal domain CMS_RS02315 PF13657 HipA N-terminal domain CMS_RS02320 PF13560 Helix-turn-helix domain CMS_RS02325 PF01925 CMS_RS02325 CMS_RS02330 PF03807 NADP oxidoreductase coenzyme F420-dependent CMS_RS02335 PF03861 ANTAR domain CMS_RS02340 PF03861 ANTAR domain CMS_RS02340 PF13185 GAF domain CMS_RS02345 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS02360 PF00072 Response regulator receiver domain CMS_RS02360 PF00196 Bacterial regulatory proteins, luxR family CMS_RS02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS02365 PF07730 Histidine kinase CMS_RS02375 PF00005 ABC transporter CMS_RS02385 PF13020 CMS_RS02385 CMS_RS02390 PF00271 Helicase conserved C-terminal domain CMS_RS02410 PF00392 Bacterial regulatory proteins, gntR family CMS_RS02425 PF01037 AsnC family CMS_RS02425 PF13404 AsnC-type helix-turn-helix domain CMS_RS02430 PF02274 Amidinotransferase CMS_RS02435 PF00202 Aminotransferase class-III CMS_RS02450 PF01370 NAD dependent epimerase/dehydratase family CMS_RS02465 PF01551 Peptidase family M23 CMS_RS02475 PF03364 Polyketide cyclase / dehydrase and lipid transport CMS_RS02490 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CMS_RS02495 PF00072 Response regulator receiver domain CMS_RS02495 PF00196 Bacterial regulatory proteins, luxR family CMS_RS02500 PF07730 Histidine kinase CMS_RS02505 PF09656 CMS_RS02505 CMS_RS02510 PF00440 Bacterial regulatory proteins, tetR family CMS_RS02515 PF07690 Major Facilitator Superfamily CMS_RS02525 PF00296 Luciferase-like monooxygenase CMS_RS02530 PF00107 Zinc-binding dehydrogenase CMS_RS02530 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS02545 PF00291 Pyridoxal-phosphate dependent enzyme CMS_RS02550 PF00132 Bacterial transferase hexapeptide (six repeats) CMS_RS02555 PF00588 SpoU rRNA Methylase family CMS_RS02565 PF00665 Integrase core domain CMS_RS02565 PF13011 CMS_RS02565 CMS_RS02570 PF00485 Phosphoribulokinase / Uridine kinase family CMS_RS02575 PF01380 SIS domain CMS_RS02575 PF13522 Glutamine amidotransferase domain CMS_RS02580 PF01648 4'-phosphopantetheinyl transferase superfamily CMS_RS02585 PF00842 Alanine racemase, C-terminal domain CMS_RS02585 PF01168 Alanine racemase, N-terminal domain CMS_RS02590 PF00842 Alanine racemase, C-terminal domain CMS_RS02590 PF01168 Alanine racemase, N-terminal domain CMS_RS02590 PF02367 Uncharacterised P-loop hydrolase UPF0079 CMS_RS02595 PF00814 Glycoprotease family CMS_RS02600 PF00814 Glycoprotease family CMS_RS02600 PF13673 Acetyltransferase (GNAT) domain CMS_RS02615 PF00166 Chaperonin 10 Kd subunit CMS_RS02620 PF00892 EamA-like transporter family CMS_RS02625 PF13458 Periplasmic binding protein CMS_RS02630 PF00005 ABC transporter CMS_RS02635 PF00005 ABC transporter CMS_RS02635 PF12399 Branched-chain amino acid ATP-binding cassette transporter CMS_RS02640 PF02653 CMS_RS02640 CMS_RS02645 PF02653 CMS_RS02645 CMS_RS02650 PF00478 IMP dehydrogenase / GMP reductase domain CMS_RS02650 PF00571 CBS domain CMS_RS02660 PF00478 IMP dehydrogenase / GMP reductase domain CMS_RS02665 PF02080 TrkA-C domain CMS_RS02670 PF00999 Sodium/hydrogen exchanger family CMS_RS02675 PF02104 CMS_RS02675 CMS_RS02680 PF12823 CMS_RS02680 CMS_RS02685 PF00117 Glutamine amidotransferase class-I CMS_RS02685 PF00958 GMP synthase C terminal domain CMS_RS02685 PF02540 NAD synthase CMS_RS02695 PF03009 Glycerophosphoryl diester phosphodiesterase family CMS_RS02720 PF02624 YcaO-like family CMS_RS02725 PF00881 Nitroreductase family CMS_RS02730 PF00005 ABC transporter CMS_RS02740 PF01261 Xylose isomerase-like TIM barrel CMS_RS02740 PF07582 AP endonuclease family 2 C terminus CMS_RS02750 PF03741 CMS_RS02750 CMS_RS02755 PF00072 Response regulator receiver domain CMS_RS02755 PF00486 Transcriptional regulatory protein, C terminal CMS_RS02760 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS02760 PF00672 HAMP domain CMS_RS02760 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS02770 PF00583 Acetyltransferase (GNAT) family CMS_RS02785 PF01022 Bacterial regulatory protein, arsR family CMS_RS02790 PF06745 KaiC CMS_RS02790 PF13541 Subunit ChlI of Mg-chelatase CMS_RS02800 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CMS_RS02810 PF00665 Integrase core domain CMS_RS02810 PF13011 CMS_RS02810 CMS_RS02815 PF00005 ABC transporter CMS_RS02820 PF10099 CMS_RS02820 CMS_RS02825 PF04542 Sigma-70 region 2 CMS_RS02825 PF08281 Sigma-70, region 4 CMS_RS02885 PF00665 Integrase core domain CMS_RS02885 PF13011 CMS_RS02885 CMS_RS02890 PF01263 Aldose 1-epimerase CMS_RS02895 PF00455 CMS_RS02895 CMS_RS02895 PF08220 DeoR-like helix-turn-helix domain CMS_RS02900 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain CMS_RS02900 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain CMS_RS02905 PF00288 GHMP kinases N terminal domain CMS_RS02905 PF08544 GHMP kinases C terminal CMS_RS02905 PF10509 Galactokinase galactose-binding signature CMS_RS02915 PF00132 Bacterial transferase hexapeptide (six repeats) CMS_RS02920 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CMS_RS02920 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CMS_RS02925 PF00464 Serine hydroxymethyltransferase CMS_RS02930 PF11941 Domain of unknown function (DUF3459) CMS_RS02940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS02940 PF03466 LysR substrate binding domain CMS_RS02945 PF05977 Transmembrane secretion effector CMS_RS02960 PF01325 Iron dependent repressor, N-terminal DNA binding domain CMS_RS02960 PF02742 Iron dependent repressor, metal binding and dimerisation domain CMS_RS02960 PF04023 FeoA domain CMS_RS02965 PF01566 CMS_RS02965 CMS_RS02975 PF07690 Major Facilitator Superfamily CMS_RS02980 PF00551 Formyl transferase CMS_RS02980 PF01842 ACT domain CMS_RS02985 PF00082 Subtilase family CMS_RS02985 PF02225 PA domain CMS_RS02985 PF05922 Peptidase inhibitor I9 CMS_RS02985 PF16640 CMS_RS02985 CMS_RS02990 PF00082 Subtilase family CMS_RS02990 PF02225 PA domain CMS_RS02990 PF05922 Peptidase inhibitor I9 CMS_RS02990 PF16640 CMS_RS02990 CMS_RS02995 PF00180 Isocitrate/isopropylmalate dehydrogenase CMS_RS03000 PF00583 Acetyltransferase (GNAT) family CMS_RS03010 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CMS_RS03015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CMS_RS03025 PF13411 MerR HTH family regulatory protein CMS_RS03030 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CMS_RS03030 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CMS_RS03030 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CMS_RS03030 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CMS_RS03035 PF01048 Phosphorylase superfamily CMS_RS03040 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMS_RS03040 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS03045 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CMS_RS03045 PF00364 Biotin-requiring enzyme CMS_RS03045 PF02785 Biotin carboxylase C-terminal domain CMS_RS03045 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMS_RS03055 PF02545 Maf-like protein CMS_RS03060 PF01938 TRAM domain CMS_RS03060 PF05958 tRNA (Uracil-5-)-methyltransferase CMS_RS03065 PF00072 Response regulator receiver domain CMS_RS03065 PF00196 Bacterial regulatory proteins, luxR family CMS_RS03070 PF00665 Integrase core domain CMS_RS03070 PF13011 CMS_RS03070 CMS_RS03085 PF13822 CMS_RS03085 CMS_RS03090 PF01039 Carboxyl transferase domain CMS_RS03095 PF02237 Biotin protein ligase C terminal domain CMS_RS03095 PF03099 Biotin/lipoate A/B protein ligase family CMS_RS03100 PF03703 CMS_RS03100 CMS_RS03105 PF04138 CMS_RS03105 CMS_RS03110 PF02222 ATP-grasp domain CMS_RS03115 PF00731 AIR carboxylase CMS_RS03120 PF03816 Cell envelope-related transcriptional attenuator domain CMS_RS03125 PF13579 Glycosyl transferase 4-like domain CMS_RS03125 PF13692 Glycosyl transferases group 1 CMS_RS03130 PF00005 ABC transporter CMS_RS03135 PF01061 CMS_RS03135 CMS_RS03140 PF04321 RmlD substrate binding domain CMS_RS03145 PF16363 CMS_RS03145 CMS_RS03150 PF04138 CMS_RS03150 CMS_RS03155 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CMS_RS03160 PF00483 Nucleotidyl transferase CMS_RS03165 PF00535 Glycosyl transferase family 2 CMS_RS03175 PF13641 Glycosyltransferase like family 2 CMS_RS03190 PF00535 Glycosyl transferase family 2 CMS_RS03195 PF03275 UDP-galactopyranose mutase CMS_RS03195 PF13450 NAD(P)-binding Rossmann-like domain CMS_RS03200 PF13641 Glycosyltransferase like family 2 CMS_RS03210 PF04138 CMS_RS03210 CMS_RS03215 PF04932 CMS_RS03215 CMS_RS03220 PF04932 CMS_RS03220 CMS_RS03225 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS03225 PF02770 Acyl-CoA dehydrogenase, middle domain CMS_RS03225 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CMS_RS03230 PF01238 Phosphomannose isomerase type I CMS_RS03235 PF01370 NAD dependent epimerase/dehydratase family CMS_RS03245 PF02467 CMS_RS03245 CMS_RS03250 PF13641 Glycosyltransferase like family 2 CMS_RS03265 PF12005 CMS_RS03265 CMS_RS03270 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CMS_RS03270 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CMS_RS03270 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CMS_RS03270 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CMS_RS03275 PF02583 Metal-sensitive transcriptional repressor CMS_RS03280 PF00403 Heavy-metal-associated domain CMS_RS03285 PF00122 E1-E2 ATPase CMS_RS03285 PF00403 Heavy-metal-associated domain CMS_RS03285 PF00702 haloacid dehalogenase-like hydrolase CMS_RS03290 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CMS_RS03290 PF05221 S-adenosyl-L-homocysteine hydrolase CMS_RS03295 PF06271 CMS_RS03295 CMS_RS03305 PF00933 Glycosyl hydrolase family 3 N terminal domain CMS_RS03305 PF01915 Glycosyl hydrolase family 3 C-terminal domain CMS_RS03305 PF07691 PA14 domain CMS_RS03305 PF14310 Fibronectin type III-like domain CMS_RS03310 PF13347 MFS/sugar transport protein CMS_RS03315 PF00440 Bacterial regulatory proteins, tetR family CMS_RS03320 PF01882 CMS_RS03320 CMS_RS03325 PF00665 Integrase core domain CMS_RS03325 PF13011 CMS_RS03325 CMS_RS03330 PF07726 ATPase family associated with various cellular activities (AAA) CMS_RS03340 PF13559 CMS_RS03340 CMS_RS03350 PF00072 Response regulator receiver domain CMS_RS03350 PF00486 Transcriptional regulatory protein, C terminal CMS_RS03355 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS03355 PF00672 HAMP domain CMS_RS03355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS03360 PF10646 CMS_RS03360 CMS_RS03360 PF10647 CMS_RS03360 CMS_RS03365 PF00156 Phosphoribosyl transferase domain CMS_RS03370 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CMS_RS03370 PF16321 CMS_RS03370 CMS_RS03375 PF01043 SecA preprotein cross-linking domain CMS_RS03375 PF07516 SecA Wing and Scaffold domain CMS_RS03375 PF07517 SecA DEAD-like domain CMS_RS03390 PF13144 SAF-like CMS_RS03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS03400 PF07568 CMS_RS03400 CMS_RS03400 PF08448 PAS fold CMS_RS03400 PF12282 Signal transduction histidine kinase CMS_RS03405 PF02467 CMS_RS03405 CMS_RS03415 PF00578 AhpC/TSA family CMS_RS03425 PF02559 CarD-like/TRCF domain CMS_RS03435 PF07510 CMS_RS03435 CMS_RS03445 PF00324 Amino acid permease CMS_RS03455 PF05977 Transmembrane secretion effector CMS_RS03460 PF12802 MarR family CMS_RS03470 PF00665 Integrase core domain CMS_RS03470 PF13011 CMS_RS03470 CMS_RS03475 PF13649 Methyltransferase domain CMS_RS03480 PF13631 Cytochrome b(N-terminal)/b6/petB CMS_RS03485 PF00355 Rieske [2Fe-2S] domain CMS_RS03490 PF13442 Cytochrome C oxidase, cbb3-type, subunit III CMS_RS03495 PF00510 Cytochrome c oxidase subunit III CMS_RS03500 PF00591 Glycosyl transferase family, a/b domain CMS_RS03500 PF02885 Glycosyl transferase family, helical bundle domain CMS_RS03505 PF02586 Uncharacterised ACR, COG2135 CMS_RS03515 PF00230 Major intrinsic protein CMS_RS03520 PF02733 Dak1 domain CMS_RS03525 PF02734 DAK2 domain CMS_RS03530 PF00381 PTS HPr component phosphorylation site CMS_RS03530 PF03610 PTS system fructose IIA component CMS_RS03540 PF04978 Protein of unknown function (DUF664) CMS_RS03545 PF00255 Glutathione peroxidase CMS_RS03550 PF01266 FAD dependent oxidoreductase CMS_RS03550 PF16901 CMS_RS03550 CMS_RS03555 PF04198 Putative sugar-binding domain CMS_RS03580 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMS_RS03580 PF03129 Anticodon binding domain CMS_RS03580 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CMS_RS03585 PF01230 HIT domain CMS_RS03590 PF01680 SOR/SNZ family CMS_RS03595 PF01174 SNO glutamine amidotransferase family CMS_RS03600 PF01709 Transcriptional regulator CMS_RS03605 PF02075 Crossover junction endodeoxyribonuclease RuvC CMS_RS03610 PF01330 RuvA N terminal domain CMS_RS03610 PF07499 RuvA, C-terminal domain CMS_RS03610 PF14520 Helix-hairpin-helix domain CMS_RS03615 PF05491 Holliday junction DNA helicase ruvB C-terminus CMS_RS03615 PF05496 Holliday junction DNA helicase ruvB N-terminus CMS_RS03620 PF02699 Preprotein translocase subunit CMS_RS03625 PF02355 Protein export membrane protein CMS_RS03630 PF02355 Protein export membrane protein CMS_RS03635 PF00581 Rhodanese-like domain CMS_RS03640 PF02824 TGS domain CMS_RS03640 PF04607 Region found in RelA / SpoT proteins CMS_RS03640 PF13291 ACT domain CMS_RS03640 PF13328 HD domain CMS_RS03650 PF03993 CMS_RS03650 CMS_RS03660 PF00004 ATPase family associated with various cellular activities (AAA) CMS_RS03660 PF12002 MgsA AAA+ ATPase C terminal CMS_RS03660 PF16193 CMS_RS03660 CMS_RS03665 PF00163 Ribosomal protein S4/S9 N-terminal domain CMS_RS03665 PF01479 S4 domain CMS_RS03675 PF01411 tRNA synthetases class II (A) CMS_RS03675 PF02272 DHHA1 domain CMS_RS03675 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CMS_RS03680 PF03652 Uncharacterised protein family (UPF0081) CMS_RS03685 PF02618 YceG-like family CMS_RS03690 PF01488 Shikimate / quinate 5-dehydrogenase CMS_RS03690 PF08501 Shikimate dehydrogenase substrate binding domain CMS_RS03695 PF01264 Chorismate synthase CMS_RS03700 PF01202 Shikimate kinase CMS_RS03705 PF01761 3-dehydroquinate synthase CMS_RS03710 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS03715 PF00665 Integrase core domain CMS_RS03715 PF13011 CMS_RS03715 CMS_RS03720 PF03602 Conserved hypothetical protein 95 CMS_RS03725 PF07726 ATPase family associated with various cellular activities (AAA) CMS_RS03730 PF01882 CMS_RS03730 CMS_RS03740 PF00270 DEAD/DEAH box helicase CMS_RS03740 PF00271 Helicase conserved C-terminal domain CMS_RS03740 PF17191 CMS_RS03740 CMS_RS03745 PF01467 Cytidylyltransferase CMS_RS03750 PF02620 CMS_RS03750 CMS_RS03755 PF01783 Ribosomal L32p protein family CMS_RS03760 PF00035 Double-stranded RNA binding motif CMS_RS03760 PF14622 Ribonuclease-III-like CMS_RS03765 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CMS_RS03765 PF06827 Zinc finger found in FPG and IleRS CMS_RS03765 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CMS_RS03770 PF00583 Acetyltransferase (GNAT) family CMS_RS03775 PF02463 RecF/RecN/SMC N terminal domain CMS_RS03775 PF06470 SMC proteins Flexible Hinge Domain CMS_RS03780 PF00448 SRP54-type protein, GTPase domain CMS_RS03780 PF02881 SRP54-type protein, helical bundle domain CMS_RS03785 PF00448 SRP54-type protein, GTPase domain CMS_RS03785 PF02881 SRP54-type protein, helical bundle domain CMS_RS03785 PF02978 Signal peptide binding domain CMS_RS03790 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS03795 PF02674 CMS_RS03795 CMS_RS03795 PF13365 Trypsin-like peptidase domain CMS_RS03800 PF04107 Glutamate-cysteine ligase family 2(GCS2) CMS_RS03805 PF00886 Ribosomal protein S16 CMS_RS03810 PF13083 KH domain CMS_RS03815 PF01782 RimM N-terminal domain CMS_RS03820 PF01746 tRNA (Guanine-1)-methyltransferase CMS_RS03825 PF00557 Metallopeptidase family M24 CMS_RS03835 PF01245 Ribosomal protein L19 CMS_RS03840 PF00717 Peptidase S24-like CMS_RS03840 PF10502 Signal peptidase, peptidase S26 CMS_RS03845 PF01351 Ribonuclease HII CMS_RS03850 PF10611 CMS_RS03850 CMS_RS03855 PF02021 Uncharacterised protein family UPF0102 CMS_RS03860 PF01078 Magnesium chelatase, subunit ChlI CMS_RS03860 PF13335 CMS_RS03860 CMS_RS03860 PF13541 Subunit ChlI of Mg-chelatase CMS_RS03865 PF02481 DNA recombination-mediator protein A CMS_RS03870 PF00589 Phage integrase family CMS_RS03870 PF02899 Phage integrase, N-terminal SAM-like domain CMS_RS03875 PF01551 Peptidase family M23 CMS_RS03880 PF00083 Sugar (and other) transporter CMS_RS03885 PF00318 Ribosomal protein S2 CMS_RS03890 PF00889 Elongation factor TS CMS_RS03895 PF00696 Amino acid kinase family CMS_RS03900 PF01765 Ribosome recycling factor CMS_RS03905 PF01148 Cytidylyltransferase family CMS_RS03920 PF00999 Sodium/hydrogen exchanger family CMS_RS03935 PF01594 CMS_RS03935 CMS_RS03950 PF00085 Thioredoxin CMS_RS03950 PF14561 Tetratricopeptide repeat CMS_RS03955 PF00128 Alpha amylase, catalytic domain CMS_RS03955 PF02806 Alpha amylase, C-terminal all-beta domain CMS_RS03955 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CMS_RS03960 PF11896 Domain of unknown function (DUF3416) CMS_RS03965 PF00665 Integrase core domain CMS_RS03965 PF13011 CMS_RS03965 CMS_RS03970 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS03975 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CMS_RS03990 PF01266 FAD dependent oxidoreductase CMS_RS04000 PF05448 Acetyl xylan esterase (AXE1) CMS_RS04005 PF00440 Bacterial regulatory proteins, tetR family CMS_RS04005 PF13977 Bacterial transcriptional repressor CMS_RS04010 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CMS_RS04010 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CMS_RS04015 PF00005 ABC transporter CMS_RS04015 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CMS_RS04020 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04025 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04040 PF08279 HTH domain CMS_RS04040 PF13280 CMS_RS04040 CMS_RS04075 PF00106 short chain dehydrogenase CMS_RS04080 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS04095 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CMS_RS04095 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CMS_RS04100 PF04542 Sigma-70 region 2 CMS_RS04100 PF08281 Sigma-70, region 4 CMS_RS04105 PF00072 Response regulator receiver domain CMS_RS04115 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS04115 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CMS_RS04125 PF07987 Domain of unkown function (DUF1775) CMS_RS04130 PF03929 CMS_RS04130 CMS_RS04135 PF00356 Bacterial regulatory proteins, lacI family CMS_RS04135 PF13377 Periplasmic binding protein-like domain CMS_RS04145 PF13439 Glycosyltransferase Family 4 CMS_RS04145 PF13692 Glycosyl transferases group 1 CMS_RS04150 PF02698 DUF218 domain CMS_RS04155 PF14117 CMS_RS04155 CMS_RS04160 PF02537 CMS_RS04160 CMS_RS04165 PF02537 CMS_RS04165 CMS_RS04170 PF00583 Acetyltransferase (GNAT) family CMS_RS04175 PF00293 NUDIX domain CMS_RS04180 PF01820 D-ala D-ala ligase N-terminus CMS_RS04180 PF07478 D-ala D-ala ligase C-terminus CMS_RS04190 PF01872 RibD C-terminal domain CMS_RS04195 PF13416 Bacterial extracellular solute-binding protein CMS_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04205 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04210 PF06283 Trehalose utilisation CMS_RS04215 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS04220 PF00480 ROK family CMS_RS04220 PF09339 IclR helix-turn-helix domain CMS_RS04225 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS04235 PF01817 Chorismate mutase type II CMS_RS04240 PF02694 CMS_RS04240 CMS_RS04245 PF16571 CMS_RS04245 CMS_RS04265 PF00892 EamA-like transporter family CMS_RS04270 PF00440 Bacterial regulatory proteins, tetR family CMS_RS04275 PF01230 HIT domain CMS_RS04280 PF08000 Bacterial PH domain CMS_RS04285 PF04264 YceI-like domain CMS_RS04290 PF08279 HTH domain CMS_RS04290 PF13280 CMS_RS04290 CMS_RS04295 PF00107 Zinc-binding dehydrogenase CMS_RS04295 PF16884 CMS_RS04295 CMS_RS04300 PF04542 Sigma-70 region 2 CMS_RS04300 PF08281 Sigma-70, region 4 CMS_RS04305 PF13490 Putative zinc-finger CMS_RS04320 PF07690 Major Facilitator Superfamily CMS_RS04335 PF12688 Tetratrico peptide repeat CMS_RS04340 PF00356 Bacterial regulatory proteins, lacI family CMS_RS04340 PF13377 Periplasmic binding protein-like domain CMS_RS04345 PF13416 Bacterial extracellular solute-binding protein CMS_RS04350 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04355 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04360 PF00933 Glycosyl hydrolase family 3 N terminal domain CMS_RS04360 PF01915 Glycosyl hydrolase family 3 C-terminal domain CMS_RS04360 PF14310 Fibronectin type III-like domain CMS_RS04370 PF13560 Helix-turn-helix domain CMS_RS04375 PF00106 short chain dehydrogenase CMS_RS04385 PF13302 Acetyltransferase (GNAT) domain CMS_RS04395 PF00144 Beta-lactamase CMS_RS04410 PF06964 Alpha-L-arabinofuranosidase C-terminus CMS_RS04415 PF11774 Lsr2 CMS_RS04420 PF07683 Cobalamin synthesis protein cobW C-terminal domain CMS_RS04430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS04435 PF00004 ATPase family associated with various cellular activities (AAA) CMS_RS04435 PF07724 AAA domain (Cdc48 subfamily) CMS_RS04435 PF10431 C-terminal, D2-small domain, of ClpB protein CMS_RS04440 PF00005 ABC transporter CMS_RS04465 PF02065 Melibiase CMS_RS04465 PF16875 CMS_RS04465 CMS_RS04475 PF00248 Aldo/keto reductase family CMS_RS04480 PF01244 Membrane dipeptidase (Peptidase family M19) CMS_RS04485 PF00583 Acetyltransferase (GNAT) family CMS_RS04490 PF09972 CMS_RS04490 CMS_RS04500 PF13354 Beta-lactamase enzyme family CMS_RS04505 PF01471 Putative peptidoglycan binding domain CMS_RS04505 PF08924 Domain of unknown function (DUF1906) CMS_RS04535 PF03780 CMS_RS04535 CMS_RS04540 PF12833 Helix-turn-helix domain CMS_RS04545 PF13668 Ferritin-like domain CMS_RS04550 PF00665 Integrase core domain CMS_RS04550 PF13011 CMS_RS04550 CMS_RS04565 PF00392 Bacterial regulatory proteins, gntR family CMS_RS04565 PF07702 UTRA domain CMS_RS04570 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CMS_RS04580 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CMS_RS04585 PF01979 Amidohydrolase family CMS_RS04590 PF01074 Glycosyl hydrolases family 38 N-terminal domain CMS_RS04590 PF07748 Glycosyl hydrolases family 38 C-terminal domain CMS_RS04590 PF09261 Alpha mannosidase, middle domain CMS_RS04595 PF02056 Family 4 glycosyl hydrolase CMS_RS04595 PF11975 Family 4 glycosyl hydrolase C-terminal domain CMS_RS04600 PF00455 CMS_RS04600 CMS_RS04600 PF08220 DeoR-like helix-turn-helix domain CMS_RS04605 PF00294 pfkB family carbohydrate kinase CMS_RS04610 PF13416 Bacterial extracellular solute-binding protein CMS_RS04615 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04620 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04625 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CMS_RS04630 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CMS_RS04630 PF02837 Glycosyl hydrolases family 2, sugar binding domain CMS_RS04630 PF02929 Beta galactosidase small chain CMS_RS04630 PF16353 CMS_RS04630 CMS_RS04635 PF13279 Thioesterase-like superfamily CMS_RS04640 PF03358 NADPH-dependent FMN reductase CMS_RS04645 PF01497 Periplasmic binding protein CMS_RS04650 PF01032 FecCD transport family CMS_RS04655 PF00005 ABC transporter CMS_RS04665 PF00293 NUDIX domain CMS_RS04670 PF00356 Bacterial regulatory proteins, lacI family CMS_RS04670 PF13377 Periplasmic binding protein-like domain CMS_RS04675 PF00665 Integrase core domain CMS_RS04675 PF13011 CMS_RS04675 CMS_RS04680 PF13416 Bacterial extracellular solute-binding protein CMS_RS04685 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04690 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS04695 PF00251 Glycosyl hydrolases family 32 N-terminal domain CMS_RS04700 PF00251 Glycosyl hydrolases family 32 N-terminal domain CMS_RS04700 PF08244 Glycosyl hydrolases family 32 C terminal CMS_RS04705 PF03780 CMS_RS04705 CMS_RS04710 PF00230 Major intrinsic protein CMS_RS04725 PF05656 CMS_RS04725 CMS_RS04735 PF12698 ABC-2 family transporter protein CMS_RS04740 PF00005 ABC transporter CMS_RS04740 PF13732 CMS_RS04740 CMS_RS04750 PF08450 SMP-30/Gluconolaconase/LRE-like region CMS_RS04755 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS04760 PF00106 short chain dehydrogenase CMS_RS04770 PF07690 Major Facilitator Superfamily CMS_RS04790 PF00072 Response regulator receiver domain CMS_RS04790 PF00196 Bacterial regulatory proteins, luxR family CMS_RS04795 PF07730 Histidine kinase CMS_RS04810 PF07690 Major Facilitator Superfamily CMS_RS04830 PF01593 Flavin containing amine oxidoreductase CMS_RS04835 PF01040 UbiA prenyltransferase family CMS_RS04840 PF03033 Glycosyltransferase family 28 N-terminal domain CMS_RS04845 PF00106 short chain dehydrogenase CMS_RS04850 PF13411 MerR HTH family regulatory protein CMS_RS04870 PF01047 MarR family CMS_RS04875 PF02566 OsmC-like protein CMS_RS04885 PF08808 CMS_RS04885 CMS_RS04915 PF12697 Alpha/beta hydrolase family CMS_RS04920 PF00665 Integrase core domain CMS_RS04920 PF13936 Helix-turn-helix domain CMS_RS04925 PF00665 Integrase core domain CMS_RS04925 PF13011 CMS_RS04925 CMS_RS04930 PF12146 Putative lysophospholipase CMS_RS04945 PF01370 NAD dependent epimerase/dehydratase family CMS_RS04950 PF04235 CMS_RS04950 CMS_RS04955 PF00005 ABC transporter CMS_RS04960 PF12698 ABC-2 family transporter protein CMS_RS04965 PF07730 Histidine kinase CMS_RS04970 PF00072 Response regulator receiver domain CMS_RS04970 PF00196 Bacterial regulatory proteins, luxR family CMS_RS04975 PF13407 Periplasmic binding protein domain CMS_RS04980 PF00005 ABC transporter CMS_RS04985 PF02653 CMS_RS04985 CMS_RS05005 PF12389 CMS_RS05005 CMS_RS05015 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS05015 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS05020 PF02028 BCCT family transporter CMS_RS05025 PF00781 Diacylglycerol kinase catalytic domain CMS_RS05030 PF13304 AAA domain CMS_RS05035 PF00487 CMS_RS05035 CMS_RS05040 PF00107 Zinc-binding dehydrogenase CMS_RS05040 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS05050 PF04978 Protein of unknown function (DUF664) CMS_RS05055 PF00665 Integrase core domain CMS_RS05055 PF13011 CMS_RS05055 CMS_RS05060 PF01074 Glycosyl hydrolases family 38 N-terminal domain CMS_RS05060 PF07748 Glycosyl hydrolases family 38 C-terminal domain CMS_RS05060 PF09261 Alpha mannosidase, middle domain CMS_RS05065 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS05070 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS05075 PF01547 Bacterial extracellular solute-binding protein CMS_RS05080 PF00480 ROK family CMS_RS05080 PF12802 MarR family CMS_RS05085 PF14518 Iron-containing redox enzyme CMS_RS05090 PF09360 Iron-binding zinc finger CDGSH type CMS_RS05095 PF00665 Integrase core domain CMS_RS05095 PF13011 CMS_RS05095 CMS_RS05100 PF00571 CBS domain CMS_RS05100 PF01595 CMS_RS05100 CMS_RS05100 PF03471 Transporter associated domain CMS_RS05110 PF01494 FAD binding domain CMS_RS05115 PF12802 MarR family CMS_RS05120 PF00535 Glycosyl transferase family 2 CMS_RS05135 PF01259 SAICAR synthetase CMS_RS05140 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CMS_RS05140 PF02843 Phosphoribosylglycinamide synthetase, C domain CMS_RS05140 PF02844 Phosphoribosylglycinamide synthetase, N domain CMS_RS05155 PF00156 Phosphoribosyl transferase domain CMS_RS05155 PF13522 Glutamine amidotransferase domain CMS_RS05160 PF00586 AIR synthase related protein, N-terminal domain CMS_RS05160 PF02769 AIR synthase related protein, C-terminal domain CMS_RS05165 PF11273 CMS_RS05165 CMS_RS05170 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS05175 PF12277 CMS_RS05175 CMS_RS05180 PF07332 CMS_RS05180 CMS_RS05190 PF13520 Amino acid permease CMS_RS05200 PF00155 Aminotransferase class I and II CMS_RS05200 PF00392 Bacterial regulatory proteins, gntR family CMS_RS05210 PF00128 Alpha amylase, catalytic domain CMS_RS05210 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CMS_RS05215 PF00665 Integrase core domain CMS_RS05215 PF13011 CMS_RS05215 CMS_RS05220 PF00343 Carbohydrate phosphorylase CMS_RS05220 PF11897 CMS_RS05220 CMS_RS05230 PF00128 Alpha amylase, catalytic domain CMS_RS05230 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CMS_RS05235 PF00266 Aminotransferase class-V CMS_RS05240 PF03054 tRNA methyl transferase CMS_RS05245 PF01653 NAD-dependent DNA ligase adenylation domain CMS_RS05245 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CMS_RS05245 PF03120 NAD-dependent DNA ligase OB-fold domain CMS_RS05245 PF12826 Helix-hairpin-helix motif CMS_RS05250 PF06259 Alpha/beta hydrolase CMS_RS05255 PF02686 Glu-tRNAGln amidotransferase C subunit CMS_RS05260 PF01425 Amidase CMS_RS05265 PF02637 GatB domain CMS_RS05265 PF02934 GatB/GatE catalytic domain CMS_RS05270 PF00005 ABC transporter CMS_RS05285 PF00665 Integrase core domain CMS_RS05285 PF13011 CMS_RS05285 CMS_RS05290 PF00501 AMP-binding enzyme CMS_RS05290 PF13193 AMP-binding enzyme C-terminal domain CMS_RS05295 PF10604 Polyketide cyclase / dehydrase and lipid transport CMS_RS05315 PF08817 WXG100 protein secretion system (Wss), protein YukD CMS_RS05325 PF06271 CMS_RS05325 CMS_RS05330 PF06013 Proteins of 100 residues with WXG CMS_RS05370 PF13450 NAD(P)-binding Rossmann-like domain CMS_RS05375 PF00106 short chain dehydrogenase CMS_RS05380 PF00501 AMP-binding enzyme CMS_RS05380 PF13193 AMP-binding enzyme C-terminal domain CMS_RS05385 PF00106 short chain dehydrogenase CMS_RS05395 PF01546 Peptidase family M20/M25/M40 CMS_RS05395 PF07687 Peptidase dimerisation domain CMS_RS05400 PF00665 Integrase core domain CMS_RS05400 PF13011 CMS_RS05400 CMS_RS05405 PF00326 Prolyl oligopeptidase family CMS_RS05410 PF00702 haloacid dehalogenase-like hydrolase CMS_RS05415 PF07920 Protein of unknown function (DUF1684) CMS_RS05420 PF00205 Thiamine pyrophosphate enzyme, central domain CMS_RS05420 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CMS_RS05420 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CMS_RS05425 PF03992 Antibiotic biosynthesis monooxygenase CMS_RS05430 PF00107 Zinc-binding dehydrogenase CMS_RS05430 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS05445 PF13409 Glutathione S-transferase, N-terminal domain CMS_RS05445 PF13410 Glutathione S-transferase, C-terminal domain CMS_RS05450 PF00176 SNF2 family N-terminal domain CMS_RS05450 PF00271 Helicase conserved C-terminal domain CMS_RS05455 PF00665 Integrase core domain CMS_RS05455 PF13936 Helix-turn-helix domain CMS_RS05470 PF00083 Sugar (and other) transporter CMS_RS05475 PF07883 Cupin domain CMS_RS05480 PF02581 Thiamine monophosphate synthase/TENI CMS_RS05480 PF03070 TENA/THI-4/PQQC family CMS_RS05480 PF08543 Phosphomethylpyrimidine kinase CMS_RS05485 PF02110 Hydroxyethylthiazole kinase family CMS_RS05490 PF00326 Prolyl oligopeptidase family CMS_RS05490 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CMS_RS05505 PF00462 Glutaredoxin CMS_RS05510 PF01565 FAD binding domain CMS_RS05510 PF04030 D-arabinono-1,4-lactone oxidase CMS_RS05515 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CMS_RS05515 PF02837 Glycosyl hydrolases family 2, sugar binding domain CMS_RS05515 PF02929 Beta galactosidase small chain CMS_RS05515 PF16353 CMS_RS05515 CMS_RS05520 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS05525 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS05535 PF17032 CMS_RS05535 CMS_RS05540 PF01957 NfeD-like C-terminal, partner-binding CMS_RS05545 PF01145 SPFH domain / Band 7 family CMS_RS05545 PF15975 CMS_RS05545 CMS_RS05550 PF05977 Transmembrane secretion effector CMS_RS05565 PF00753 Metallo-beta-lactamase superfamily CMS_RS05570 PF00355 Rieske [2Fe-2S] domain CMS_RS05585 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS05605 PF00282 Pyridoxal-dependent decarboxylase conserved domain CMS_RS05610 PF13434 L-lysine 6-monooxygenase (NADPH-requiring) CMS_RS05615 PF04183 IucA / IucC family CMS_RS05615 PF06276 Ferric iron reductase FhuF-like transporter CMS_RS05615 PF13523 Acetyltransferase (GNAT) domain CMS_RS05620 PF00011 Hsp20/alpha crystallin family CMS_RS05630 PF00106 short chain dehydrogenase CMS_RS05635 PF13463 Winged helix DNA-binding domain CMS_RS05640 PF05368 NmrA-like family CMS_RS05645 PF00107 Zinc-binding dehydrogenase CMS_RS05645 PF16884 CMS_RS05645 CMS_RS05650 PF03631 CMS_RS05650 CMS_RS05655 PF01928 CYTH domain CMS_RS05655 PF05235 CHAD domain CMS_RS05660 PF00135 Carboxylesterase family CMS_RS05665 PF01384 CMS_RS05665 CMS_RS05675 PF00860 Permease family CMS_RS05680 PF01566 CMS_RS05680 CMS_RS05685 PF04138 CMS_RS05685 CMS_RS05690 PF00535 Glycosyl transferase family 2 CMS_RS05695 PF04250 CMS_RS05695 CMS_RS05700 PF00206 Lyase CMS_RS05700 PF10415 Fumarase C C-terminus CMS_RS05710 PF01557 Fumarylacetoacetate (FAA) hydrolase family CMS_RS05720 PF02735 Ku70/Ku80 beta-barrel domain CMS_RS05735 PF06029 AlkA N-terminal domain CMS_RS05740 PF01565 FAD binding domain CMS_RS05740 PF02913 FAD linked oxidases, C-terminal domain CMS_RS05745 PF13367 CMS_RS05745 CMS_RS05750 PF11272 CMS_RS05750 CMS_RS05755 PF00239 Resolvase, N terminal domain CMS_RS05760 PF02113 D-Ala-D-Ala carboxypeptidase 3 (S13) family CMS_RS05765 PF00072 Response regulator receiver domain CMS_RS05765 PF00196 Bacterial regulatory proteins, luxR family CMS_RS05770 PF07730 Histidine kinase CMS_RS05775 PF11160 CMS_RS05775 CMS_RS05785 PF00210 Ferritin-like domain CMS_RS05790 PF08450 SMP-30/Gluconolaconase/LRE-like region CMS_RS05795 PF01965 DJ-1/PfpI family CMS_RS05805 PF01252 CMS_RS05805 CMS_RS05810 PF00248 Aldo/keto reductase family CMS_RS05815 PF13398 Peptidase M50B-like CMS_RS05820 PF00156 Phosphoribosyl transferase domain CMS_RS05825 PF01717 Cobalamin-independent synthase, Catalytic domain CMS_RS05830 PF04892 CMS_RS05830 CMS_RS05835 PF13245 Part of AAA domain CMS_RS05835 PF13538 UvrD-like helicase C-terminal domain CMS_RS05840 PF00939 Sodium:sulfate symporter transmembrane region CMS_RS05845 PF07510 CMS_RS05845 CMS_RS05850 PF05977 Transmembrane secretion effector CMS_RS05855 PF00312 Ribosomal protein S15 CMS_RS05860 PF00013 KH domain CMS_RS05860 PF00575 S1 RNA binding domain CMS_RS05860 PF01138 3' exoribonuclease family, domain 1 CMS_RS05860 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CMS_RS05870 PF01161 Phosphatidylethanolamine-binding protein CMS_RS05875 PF00248 Aldo/keto reductase family CMS_RS05890 PF00675 Insulinase (Peptidase family M16) CMS_RS05890 PF05193 Peptidase M16 inactive domain CMS_RS05895 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS05900 PF01113 Dihydrodipicolinate reductase, N-terminus CMS_RS05900 PF05173 Dihydrodipicolinate reductase, C-terminus CMS_RS05910 PF01370 NAD dependent epimerase/dehydratase family CMS_RS05910 PF08338 Domain of unknown function (DUF1731) CMS_RS05915 PF02511 Thymidylate synthase complementing protein CMS_RS05920 PF00701 Dihydrodipicolinate synthetase family CMS_RS05925 PF00753 Metallo-beta-lactamase superfamily CMS_RS05925 PF07521 RNA-metabolising metallo-beta-lactamase CMS_RS05935 PF00005 ABC transporter CMS_RS05940 PF02687 CMS_RS05940 CMS_RS05940 PF12704 MacB-like periplasmic core domain CMS_RS05945 PF01580 FtsK/SpoIIIE family CMS_RS05945 PF09397 Ftsk gamma domain CMS_RS05945 PF13491 CMS_RS05945 CMS_RS05950 PF01066 CDP-alcohol phosphatidyltransferase CMS_RS05955 PF02464 Competence-damaged protein CMS_RS05960 PF13560 Helix-turn-helix domain CMS_RS05965 PF11248 CMS_RS05965 CMS_RS05970 PF00154 recA bacterial DNA recombination protein CMS_RS05975 PF02631 RecX family CMS_RS05980 PF00919 Uncharacterized protein family UPF0004 CMS_RS05980 PF04055 Radical SAM superfamily CMS_RS05985 PF01715 IPP transferase CMS_RS05990 PF01678 Diaminopimelate epimerase CMS_RS05995 PF05175 Methyltransferase small domain CMS_RS06000 PF01926 50S ribosome-binding GTPase CMS_RS06000 PF13167 CMS_RS06000 CMS_RS06000 PF16360 CMS_RS06000 CMS_RS06005 PF00717 Peptidase S24-like CMS_RS06005 PF01726 LexA DNA binding domain CMS_RS06015 PF00475 Imidazoleglycerol-phosphate dehydratase CMS_RS06020 PF00117 Glutamine amidotransferase class-I CMS_RS06025 PF00977 Histidine biosynthesis protein CMS_RS06030 PF07179 CMS_RS06030 CMS_RS06040 PF00707 Translation initiation factor IF-3, C-terminal domain CMS_RS06040 PF05198 Translation initiation factor IF-3, N-terminal domain CMS_RS06045 PF01632 Ribosomal protein L35 CMS_RS06050 PF00453 Ribosomal protein L20 CMS_RS06055 PF00588 SpoU rRNA Methylase family CMS_RS06055 PF08032 RNA 2'-O ribose methyltransferase substrate binding CMS_RS06060 PF00005 ABC transporter CMS_RS06065 PF00497 Bacterial extracellular solute-binding proteins, family 3 CMS_RS06070 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS06075 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS06080 PF01409 tRNA synthetases class II core domain (F) CMS_RS06080 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CMS_RS06085 PF01588 Putative tRNA binding domain CMS_RS06085 PF03147 Ferredoxin-fold anticodon binding domain CMS_RS06085 PF03483 B3/4 domain CMS_RS06085 PF03484 tRNA synthetase B5 domain CMS_RS06090 PF01118 Semialdehyde dehydrogenase, NAD binding domain CMS_RS06090 PF02774 Semialdehyde dehydrogenase, dimerisation domain CMS_RS06095 PF01960 ArgJ family CMS_RS06100 PF00696 Amino acid kinase family CMS_RS06105 PF00202 Aminotransferase class-III CMS_RS06110 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CMS_RS06110 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CMS_RS06115 PF00764 Arginosuccinate synthase CMS_RS06120 PF00206 Lyase CMS_RS06120 PF14698 Argininosuccinate lyase C-terminal CMS_RS06125 PF02245 Methylpurine-DNA glycosylase (MPG) CMS_RS06140 PF00579 tRNA synthetases class I (W and Y) CMS_RS06140 PF01479 S4 domain CMS_RS06165 PF13242 HAD-hyrolase-like CMS_RS06165 PF13344 Haloacid dehalogenase-like hydrolase CMS_RS06175 PF01479 S4 domain CMS_RS06175 PF01728 FtsJ-like methyltransferase CMS_RS06180 PF01513 ATP-NAD kinase CMS_RS06185 PF02463 RecF/RecN/SMC N terminal domain CMS_RS06190 PF00117 Glutamine amidotransferase class-I CMS_RS06190 PF06418 CTP synthase N-terminus CMS_RS06195 PF00293 NUDIX domain CMS_RS06200 PF00589 Phage integrase family CMS_RS06200 PF02899 Phage integrase, N-terminal SAM-like domain CMS_RS06205 PF13614 AAA domain CMS_RS06210 PF02616 ScpA/B protein CMS_RS06215 PF04079 Putative transcriptional regulators (Ypuh-like) CMS_RS06220 PF00849 RNA pseudouridylate synthase CMS_RS06220 PF01479 S4 domain CMS_RS06225 PF02153 Prephenate dehydrogenase CMS_RS06230 PF02224 Cytidylate kinase CMS_RS06235 PF01926 50S ribosome-binding GTPase CMS_RS06235 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CMS_RS06240 PF00665 Integrase core domain CMS_RS06240 PF13011 CMS_RS06240 CMS_RS06250 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS06270 PF06114 Domain of unknown function (DUF955) CMS_RS06270 PF13560 Helix-turn-helix domain CMS_RS06275 PF03793 PASTA domain CMS_RS06275 PF10708 CMS_RS06275 CMS_RS06285 PF13673 Acetyltransferase (GNAT) domain CMS_RS06290 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMS_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS06300 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS06310 PF00296 Luciferase-like monooxygenase CMS_RS06320 PF02627 Carboxymuconolactone decarboxylase family CMS_RS06325 PF13468 Glyoxalase-like domain CMS_RS06335 PF07690 Major Facilitator Superfamily CMS_RS06340 PF00296 Luciferase-like monooxygenase CMS_RS06345 PF02770 Acyl-CoA dehydrogenase, middle domain CMS_RS06345 PF08028 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS06355 PF07681 CMS_RS06355 CMS_RS06365 PF03413 Peptidase propeptide and YPEB domain CMS_RS06370 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS06370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS06380 PF06738 CMS_RS06380 CMS_RS06380 PF12821 CMS_RS06380 CMS_RS06400 PF00293 NUDIX domain CMS_RS06405 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS06410 PF00561 alpha/beta hydrolase fold CMS_RS06415 PF00501 AMP-binding enzyme CMS_RS06415 PF13193 AMP-binding enzyme C-terminal domain CMS_RS06420 PF04299 Putative FMN-binding domain CMS_RS06425 PF07969 Amidohydrolase family CMS_RS06430 PF00107 Zinc-binding dehydrogenase CMS_RS06430 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS06440 PF03853 YjeF-related protein N-terminus CMS_RS06450 PF00296 Luciferase-like monooxygenase CMS_RS06455 PF07690 Major Facilitator Superfamily CMS_RS06460 PF01019 Gamma-glutamyltranspeptidase CMS_RS06465 PF01592 NifU-like N terminal domain CMS_RS06480 PF01569 PAP2 superfamily CMS_RS06485 PF01979 Amidohydrolase family CMS_RS06505 PF02625 XdhC and CoxI family CMS_RS06505 PF13478 XdhC Rossmann domain CMS_RS06510 PF13520 Amino acid permease CMS_RS06515 PF00111 2Fe-2S iron-sulfur cluster binding domain CMS_RS06515 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CMS_RS06515 PF01799 [2Fe-2S] binding domain CMS_RS06515 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CMS_RS06520 PF00941 FAD binding domain in molybdopterin dehydrogenase CMS_RS06540 PF00226 DnaJ domain CMS_RS06560 PF01479 S4 domain CMS_RS06565 PF01593 Flavin containing amine oxidoreductase CMS_RS06565 PF13450 NAD(P)-binding Rossmann-like domain CMS_RS06580 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS06580 PF13602 Zinc-binding dehydrogenase CMS_RS06590 PF00293 NUDIX domain CMS_RS06600 PF00459 Inositol monophosphatase family CMS_RS06600 PF03009 Glycerophosphoryl diester phosphodiesterase family CMS_RS06605 PF00005 ABC transporter CMS_RS06610 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS06615 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS06620 PF13416 Bacterial extracellular solute-binding protein CMS_RS06630 PF11296 CMS_RS06630 CMS_RS06640 PF01447 Thermolysin metallopeptidase, catalytic domain CMS_RS06640 PF02868 Thermolysin metallopeptidase, alpha-helical domain CMS_RS06645 PF00072 Response regulator receiver domain CMS_RS06645 PF04703 FaeA-like protein CMS_RS06650 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS06650 PF13188 PAS domain CMS_RS06650 PF17203 CMS_RS06650 CMS_RS06655 PF00375 Sodium:dicarboxylate symporter family CMS_RS06660 PF16697 CMS_RS06660 CMS_RS06665 PF13411 MerR HTH family regulatory protein CMS_RS06670 PF13411 MerR HTH family regulatory protein CMS_RS06675 PF13614 AAA domain CMS_RS06680 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CMS_RS06680 PF00364 Biotin-requiring enzyme CMS_RS06680 PF00682 HMGL-like CMS_RS06680 PF02436 Conserved carboxylase domain CMS_RS06680 PF02785 Biotin carboxylase C-terminal domain CMS_RS06680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMS_RS06685 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMS_RS06685 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS06690 PF01327 Polypeptide deformylase CMS_RS06695 PF00501 AMP-binding enzyme CMS_RS06700 PF00480 ROK family CMS_RS06705 PF01553 Acyltransferase CMS_RS06710 PF01474 Class-II DAHP synthetase family CMS_RS06715 PF00665 Integrase core domain CMS_RS06715 PF13936 Helix-turn-helix domain CMS_RS06720 PF00069 Protein kinase domain CMS_RS06720 PF03793 PASTA domain CMS_RS06725 PF01476 LysM domain CMS_RS06735 PF00348 Polyprenyl synthetase CMS_RS06740 PF11239 CMS_RS06740 CMS_RS06745 PF02381 MraZ protein CMS_RS06750 PF01795 MraW methylase family CMS_RS06760 PF00905 Penicillin binding protein transpeptidase domain CMS_RS06760 PF03717 Penicillin-binding Protein dimerisation domain CMS_RS06765 PF01225 Mur ligase family, catalytic domain CMS_RS06765 PF02875 Mur ligase family, glutamate ligase domain CMS_RS06765 PF08245 Mur ligase middle domain CMS_RS06770 PF01225 Mur ligase family, catalytic domain CMS_RS06770 PF02875 Mur ligase family, glutamate ligase domain CMS_RS06770 PF08245 Mur ligase middle domain CMS_RS06775 PF00953 Glycosyl transferase family 4 CMS_RS06780 PF02875 Mur ligase family, glutamate ligase domain CMS_RS06780 PF08245 Mur ligase middle domain CMS_RS06785 PF01098 CMS_RS06785 CMS_RS06790 PF03033 Glycosyltransferase family 28 N-terminal domain CMS_RS06790 PF04101 Glycosyltransferase family 28 C-terminal domain CMS_RS06795 PF01225 Mur ligase family, catalytic domain CMS_RS06795 PF02875 Mur ligase family, glutamate ligase domain CMS_RS06795 PF08245 Mur ligase middle domain CMS_RS06800 PF03799 Cell division protein FtsQ CMS_RS06800 PF08478 POTRA domain, FtsQ-type CMS_RS06805 PF00091 Tubulin/FtsZ family, GTPase domain CMS_RS06805 PF12327 FtsZ family, C-terminal domain CMS_RS06810 PF01168 Alanine racemase, N-terminal domain CMS_RS06815 PF04472 Protein of unknown function (DUF552) CMS_RS06820 PF02325 CMS_RS06820 CMS_RS06825 PF05103 DivIVA protein CMS_RS06830 PF00849 RNA pseudouridylate synthase CMS_RS06835 PF01336 OB-fold nucleic acid binding domain CMS_RS06835 PF02811 PHP domain CMS_RS06835 PF07733 Bacterial DNA polymerase III alpha subunit CMS_RS06835 PF14579 Helix-hairpin-helix motif CMS_RS06840 PF01613 Flavin reductase like domain CMS_RS06845 PF00815 Histidinol dehydrogenase CMS_RS06850 PF03477 ATP cone domain CMS_RS06855 PF01180 Dihydroorotate dehydrogenase CMS_RS06860 PF11241 CMS_RS06860 CMS_RS06865 PF01546 Peptidase family M20/M25/M40 CMS_RS06865 PF07687 Peptidase dimerisation domain CMS_RS06870 PF01521 Iron-sulphur cluster biosynthesis CMS_RS06875 PF00116 Cytochrome C oxidase subunit II, periplasmic domain CMS_RS06880 PF00115 Cytochrome C and Quinol oxidase polypeptide I CMS_RS06885 PF12270 CMS_RS06885 CMS_RS06890 PF13673 Acetyltransferase (GNAT) domain CMS_RS06895 PF00665 Integrase core domain CMS_RS06895 PF13011 CMS_RS06895 CMS_RS06910 PF02040 CMS_RS06910 CMS_RS06915 PF00440 Bacterial regulatory proteins, tetR family CMS_RS06920 PF03176 MMPL family CMS_RS06935 PF03992 Antibiotic biosynthesis monooxygenase CMS_RS06940 PF01261 Xylose isomerase-like TIM barrel CMS_RS06945 PF03881 Fructosamine kinase CMS_RS06950 PF00982 Glycosyltransferase family 20 CMS_RS06955 PF02358 Trehalose-phosphatase CMS_RS06960 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CMS_RS06960 PF00662 NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus CMS_RS06960 PF04039 CMS_RS06960 CMS_RS06960 PF13244 CMS_RS06960 CMS_RS06965 PF00420 NADH-ubiquinone/plastoquinone oxidoreductase chain 4L CMS_RS06970 PF00361 NADH-Ubiquinone/plastoquinone (complex I), various chains CMS_RS06975 PF01899 CMS_RS06975 CMS_RS06980 PF04066 CMS_RS06980 CMS_RS06985 PF03334 CMS_RS06985 CMS_RS06990 PF00920 Dehydratase family CMS_RS06995 PF00205 Thiamine pyrophosphate enzyme, central domain CMS_RS06995 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CMS_RS06995 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CMS_RS07000 PF10369 Small subunit of acetolactate synthase CMS_RS07000 PF13710 ACT domain CMS_RS07005 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CMS_RS07005 PF07991 Acetohydroxy acid isomeroreductase, catalytic domain CMS_RS07020 PF13564 CMS_RS07020 CMS_RS07025 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CMS_RS07025 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CMS_RS07030 PF00440 Bacterial regulatory proteins, tetR family CMS_RS07035 PF07690 Major Facilitator Superfamily CMS_RS07045 PF00180 Isocitrate/isopropylmalate dehydrogenase CMS_RS07050 PF01063 Aminotransferase class IV CMS_RS07055 PF01557 Fumarylacetoacetate (FAA) hydrolase family CMS_RS07055 PF10370 Domain of unknown function (DUF2437) CMS_RS07065 PF00749 tRNA synthetases class I (E and Q), catalytic domain CMS_RS07070 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS07085 PF00248 Aldo/keto reductase family CMS_RS07090 PF00440 Bacterial regulatory proteins, tetR family CMS_RS07090 PF16925 CMS_RS07090 CMS_RS07095 PF00106 short chain dehydrogenase CMS_RS07100 PF03741 CMS_RS07100 CMS_RS07110 PF13483 Beta-lactamase superfamily domain CMS_RS07120 PF03575 Peptidase family S51 CMS_RS07125 PF03167 Uracil DNA glycosylase superfamily CMS_RS07130 PF13420 Acetyltransferase (GNAT) domain CMS_RS07145 PF01370 NAD dependent epimerase/dehydratase family CMS_RS07150 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CMS_RS07155 PF01380 SIS domain CMS_RS07160 PF00196 Bacterial regulatory proteins, luxR family CMS_RS07165 PF00149 Calcineurin-like phosphoesterase CMS_RS07165 PF02872 5'-nucleotidase, C-terminal domain CMS_RS07170 PF01425 Amidase CMS_RS07175 PF01925 CMS_RS07175 CMS_RS07180 PF04954 Siderophore-interacting protein CMS_RS07180 PF08021 Siderophore-interacting FAD-binding domain CMS_RS07185 PF04954 Siderophore-interacting protein CMS_RS07190 PF00106 short chain dehydrogenase CMS_RS07200 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMS_RS07200 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS07205 PF00378 Enoyl-CoA hydratase/isomerase family CMS_RS07210 PF00491 Arginase family CMS_RS07215 PF03807 NADP oxidoreductase coenzyme F420-dependent CMS_RS07220 PF04012 CMS_RS07220 CMS_RS07230 PF13563 2'-5' RNA ligase superfamily CMS_RS07235 PF14013 CMS_RS07235 CMS_RS07245 PF03793 PASTA domain CMS_RS07255 PF01243 Pyridoxamine 5'-phosphate oxidase CMS_RS07255 PF10590 Pyridoxine 5'-phosphate oxidase C-terminal dimerisation region CMS_RS07260 PF07722 Peptidase C26 CMS_RS07265 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS07270 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS07275 PF07690 Major Facilitator Superfamily CMS_RS07280 PF01522 Polysaccharide deacetylase CMS_RS07285 PF00710 Asparaginase CMS_RS07290 PF00356 Bacterial regulatory proteins, lacI family CMS_RS07290 PF13377 Periplasmic binding protein-like domain CMS_RS07295 PF01841 Transglutaminase-like superfamily CMS_RS07305 PF00750 tRNA synthetases class I (R) CMS_RS07305 PF03485 Arginyl tRNA synthetase N terminal domain CMS_RS07305 PF05746 DALR anticodon binding domain CMS_RS07310 PF11209 CMS_RS07310 CMS_RS07315 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CMS_RS07315 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CMS_RS07320 PF00742 Homoserine dehydrogenase CMS_RS07320 PF01842 ACT domain CMS_RS07320 PF03447 Homoserine dehydrogenase, NAD binding domain CMS_RS07325 PF00291 Pyridoxal-phosphate dependent enzyme CMS_RS07330 PF00288 GHMP kinases N terminal domain CMS_RS07330 PF08544 GHMP kinases C terminal CMS_RS07340 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMS_RS07340 PF07497 Rho termination factor, RNA-binding domain CMS_RS07340 PF07498 Rho termination factor, N-terminal domain CMS_RS07345 PF00472 RF-1 domain CMS_RS07345 PF03462 PCRF domain CMS_RS07350 PF05175 Methyltransferase small domain CMS_RS07360 PF01300 Telomere recombination CMS_RS07365 PF00953 Glycosyl transferase family 4 CMS_RS07375 PF00665 Integrase core domain CMS_RS07375 PF13011 CMS_RS07375 CMS_RS07380 PF01152 Bacterial-like globin CMS_RS07385 PF00924 Mechanosensitive ion channel CMS_RS07390 PF01433 Peptidase family M1 CMS_RS07390 PF11838 ERAP1-like C-terminal domain CMS_RS07395 PF01323 DSBA-like thioredoxin domain CMS_RS07400 PF02502 Ribose/Galactose Isomerase CMS_RS07405 PF01149 Formamidopyrimidine-DNA glycosylase N-terminal domain CMS_RS07405 PF06827 Zinc finger found in FPG and IleRS CMS_RS07405 PF06831 Formamidopyrimidine-DNA glycosylase H2TH domain CMS_RS07410 PF00210 Ferritin-like domain CMS_RS07430 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CMS_RS07430 PF05697 Bacterial trigger factor protein (TF) CMS_RS07430 PF05698 Bacterial trigger factor protein (TF) C-terminus CMS_RS07435 PF00574 Clp protease CMS_RS07440 PF00574 Clp protease CMS_RS07445 PF00296 Luciferase-like monooxygenase CMS_RS07450 PF06689 ClpX C4-type zinc finger CMS_RS07450 PF07724 AAA domain (Cdc48 subfamily) CMS_RS07450 PF10431 C-terminal, D2-small domain, of ClpB protein CMS_RS07455 PF01432 Peptidase family M3 CMS_RS07460 PF13847 Methyltransferase domain CMS_RS07470 PF00583 Acetyltransferase (GNAT) family CMS_RS07475 PF00133 tRNA synthetases class I (I, L, M and V) CMS_RS07475 PF08264 Anticodon-binding domain of tRNA CMS_RS07480 PF00821 Phosphoenolpyruvate carboxykinase CMS_RS07480 PF17297 CMS_RS07480 CMS_RS07485 PF12844 Helix-turn-helix domain CMS_RS07490 PF00005 ABC transporter CMS_RS07490 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CMS_RS07495 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS07500 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS07505 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMS_RS07510 PF00440 Bacterial regulatory proteins, tetR family CMS_RS07515 PF08241 Methyltransferase domain CMS_RS07520 PF00665 Integrase core domain CMS_RS07520 PF13011 CMS_RS07520 CMS_RS07525 PF12850 Calcineurin-like phosphoesterase superfamily domain CMS_RS07530 PF00583 Acetyltransferase (GNAT) family CMS_RS07540 PF00970 Oxidoreductase FAD-binding domain CMS_RS07545 PF08002 Protein of unknown function (DUF1697) CMS_RS07550 PF09995 CMS_RS07550 CMS_RS07555 PF00817 impB/mucB/samB family CMS_RS07555 PF11799 impB/mucB/samB family C-terminal domain CMS_RS07565 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CMS_RS07565 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CMS_RS07565 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CMS_RS07570 PF00128 Alpha amylase, catalytic domain CMS_RS07570 PF11941 Domain of unknown function (DUF3459) CMS_RS07575 PF00128 Alpha amylase, catalytic domain CMS_RS07590 PF09819 CMS_RS07590 CMS_RS07595 PF00005 ABC transporter CMS_RS07600 PF02361 Cobalt transport protein CMS_RS07615 PF06262 Possibl zinc metallo-peptidase CMS_RS07625 PF00929 Exonuclease CMS_RS07645 PF02540 NAD synthase CMS_RS07660 PF01625 Peptide methionine sulfoxide reductase CMS_RS07670 PF12802 MarR family CMS_RS07680 PF00005 ABC transporter CMS_RS07680 PF12848 ABC transporter CMS_RS07685 PF13279 Thioesterase-like superfamily CMS_RS07690 PF13622 Thioesterase-like superfamily CMS_RS07705 PF04832 SOUL heme-binding protein CMS_RS07710 PF04073 Aminoacyl-tRNA editing domain CMS_RS07715 PF01323 DSBA-like thioredoxin domain CMS_RS07725 PF01207 Dihydrouridine synthase (Dus) CMS_RS07730 PF01966 HD domain CMS_RS07730 PF13286 Phosphohydrolase-associated domain CMS_RS07735 PF01807 CHC2 zinc finger CMS_RS07735 PF08275 DNA primase catalytic core, N-terminal domain CMS_RS07735 PF08278 DNA primase DnaG DnaB-binding CMS_RS07735 PF10410 DnaB-helicase binding domain of primase CMS_RS07735 PF13662 Toprim domain CMS_RS07740 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMS_RS07745 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS07750 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS07755 PF00005 ABC transporter CMS_RS07755 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CMS_RS07760 PF00005 ABC transporter CMS_RS07765 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CMS_RS07770 PF10282 Lactonase, 7-bladed beta-propeller CMS_RS07795 PF02624 YcaO-like family CMS_RS07800 PF02624 YcaO-like family CMS_RS07805 PF01032 FecCD transport family CMS_RS07810 PF00005 ABC transporter CMS_RS07815 PF01497 Periplasmic binding protein CMS_RS07820 PF05977 Transmembrane secretion effector CMS_RS07835 PF01327 Polypeptide deformylase CMS_RS07840 PF05653 CMS_RS07840 CMS_RS07845 PF00534 Glycosyl transferases group 1 CMS_RS07845 PF13439 Glycosyltransferase Family 4 CMS_RS07855 PF01757 CMS_RS07855 CMS_RS07860 PF01370 NAD dependent epimerase/dehydratase family CMS_RS07865 PF16363 CMS_RS07865 CMS_RS07870 PF13579 Glycosyl transferase 4-like domain CMS_RS07870 PF13692 Glycosyl transferases group 1 CMS_RS07880 PF13439 Glycosyltransferase Family 4 CMS_RS07880 PF13692 Glycosyl transferases group 1 CMS_RS07895 PF04230 CMS_RS07895 CMS_RS07900 PF13579 Glycosyl transferase 4-like domain CMS_RS07900 PF13692 Glycosyl transferases group 1 CMS_RS07905 PF01943 CMS_RS07905 CMS_RS07910 PF02397 CMS_RS07910 CMS_RS07910 PF13727 CoA-binding domain CMS_RS07920 PF00313 'Cold-shock' DNA-binding domain CMS_RS07925 PF00476 DNA polymerase family A CMS_RS07935 PF07920 Protein of unknown function (DUF1684) CMS_RS07940 PF03551 Transcriptional regulator PadR-like family CMS_RS07945 PF11343 CMS_RS07945 CMS_RS07950 PF00109 Beta-ketoacyl synthase, N-terminal domain CMS_RS07950 PF02801 Beta-ketoacyl synthase, C-terminal domain CMS_RS07955 PF00550 Phosphopantetheine attachment site CMS_RS07960 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CMS_RS07960 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CMS_RS07965 PF00698 Acyl transferase domain CMS_RS07970 PF13556 PucR C-terminal helix-turn-helix domain CMS_RS07975 PF00456 Transketolase, thiamine diphosphate binding domain CMS_RS07980 PF00578 AhpC/TSA family CMS_RS07995 PF00440 Bacterial regulatory proteins, tetR family CMS_RS07995 PF02909 Tetracyclin repressor, C-terminal all-alpha domain CMS_RS08000 PF02632 BioY family CMS_RS08005 PF00005 ABC transporter CMS_RS08010 PF02361 Cobalt transport protein CMS_RS08020 PF01784 NIF3 (NGG1p interacting factor 3) CMS_RS08030 PF00480 ROK family CMS_RS08040 PF02548 Ketopantoate hydroxymethyltransferase CMS_RS08045 PF00120 Glutamine synthetase, catalytic domain CMS_RS08045 PF03951 Glutamine synthetase, beta-Grasp domain CMS_RS08050 PF03710 Glutamate-ammonia ligase adenylyltransferase CMS_RS08050 PF08335 GlnD PII-uridylyltransferase CMS_RS08055 PF00120 Glutamine synthetase, catalytic domain CMS_RS08055 PF03951 Glutamine synthetase, beta-Grasp domain CMS_RS08070 PF13829 CMS_RS08070 CMS_RS08075 PF00069 Protein kinase domain CMS_RS08080 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CMS_RS08080 PF00364 Biotin-requiring enzyme CMS_RS08080 PF02817 e3 binding domain CMS_RS08085 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMS_RS08085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS08090 PF00883 Cytosol aminopeptidase family, catalytic domain CMS_RS08090 PF02789 Cytosol aminopeptidase family, N-terminal domain CMS_RS08095 PF09754 PAC2 family CMS_RS08100 PF07690 Major Facilitator Superfamily CMS_RS08105 PF00140 Sigma-70 factor, region 1 CMS_RS08105 PF04539 Sigma-70 region 3 CMS_RS08105 PF04542 Sigma-70 region 2 CMS_RS08105 PF04545 Sigma-70, region 4 CMS_RS08110 PF08245 Mur ligase middle domain CMS_RS08110 PF08353 CMS_RS08110 CMS_RS08115 PF07685 CobB/CobQ-like glutamine amidotransferase domain CMS_RS08125 PF00204 DNA gyrase B CMS_RS08125 PF00986 DNA gyrase B subunit, carboxyl terminus CMS_RS08125 PF01751 Toprim domain CMS_RS08125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS08130 PF00521 DNA gyrase/topoisomerase IV, subunit A CMS_RS08130 PF03989 DNA gyrase C-terminal domain, beta-propeller CMS_RS08135 PF01663 Type I phosphodiesterase / nucleotide pyrophosphatase CMS_RS08140 PF11268 CMS_RS08140 CMS_RS08145 PF13834 CMS_RS08145 CMS_RS08150 PF00665 Integrase core domain CMS_RS08150 PF13011 CMS_RS08150 CMS_RS08155 PF11292 CMS_RS08155 CMS_RS08160 PF00692 dUTPase CMS_RS08165 PF12502 CMS_RS08165 CMS_RS08170 PF11361 CMS_RS08170 CMS_RS08175 PF00330 Aconitase family (aconitate hydratase) CMS_RS08175 PF00694 Aconitase C-terminal domain CMS_RS08180 PF02779 Transketolase, pyrimidine binding domain CMS_RS08180 PF02780 Transketolase, C-terminal domain CMS_RS08180 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CMS_RS08185 PF00378 Enoyl-CoA hydratase/isomerase family CMS_RS08185 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CMS_RS08185 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CMS_RS08190 PF00108 Thiolase, N-terminal domain CMS_RS08190 PF02803 Thiolase, C-terminal domain CMS_RS08195 PF00570 HRDC domain CMS_RS08195 PF01612 3'-5' exonuclease CMS_RS08200 PF11452 CMS_RS08200 CMS_RS08205 PF01872 RibD C-terminal domain CMS_RS08210 PF02657 Fe-S metabolism associated domain CMS_RS08215 PF00581 Rhodanese-like domain CMS_RS08220 PF03969 AFG1-like ATPase CMS_RS08225 PF00909 Ammonium Transporter Family CMS_RS08230 PF00248 Aldo/keto reductase family CMS_RS08240 PF05175 Methyltransferase small domain CMS_RS08245 PF00665 Integrase core domain CMS_RS08245 PF13011 CMS_RS08245 CMS_RS08255 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CMS_RS08260 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS08265 PF00005 ABC transporter CMS_RS08270 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS08275 PF00226 DnaJ domain CMS_RS08280 PF01370 NAD dependent epimerase/dehydratase family CMS_RS08285 PF01544 CorA-like Mg2+ transporter protein CMS_RS08295 PF01546 Peptidase family M20/M25/M40 CMS_RS08295 PF07687 Peptidase dimerisation domain CMS_RS08300 PF02673 CMS_RS08300 CMS_RS08305 PF01406 tRNA synthetases class I (C) catalytic domain CMS_RS08310 PF09754 PAC2 family CMS_RS08315 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS08320 PF08704 tRNA methyltransferase complex GCD14 subunit CMS_RS08320 PF14801 tRNA methyltransferase complex GCD14 subunit N-term CMS_RS08325 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CMS_RS08330 PF13280 CMS_RS08330 CMS_RS08335 PF13280 CMS_RS08335 CMS_RS08345 PF00902 Sec-independent protein translocase protein (TatC) CMS_RS08350 PF00270 DEAD/DEAH box helicase CMS_RS08350 PF00271 Helicase conserved C-terminal domain CMS_RS08350 PF08148 DSHCT (NUC185) domain CMS_RS08350 PF13234 rRNA-processing arch domain CMS_RS08355 PF00795 Carbon-nitrogen hydrolase CMS_RS08360 PF13397 Domain of unknown function (DUF4109) CMS_RS08365 PF03009 Glycerophosphoryl diester phosphodiesterase family CMS_RS08375 PF00106 short chain dehydrogenase CMS_RS08380 PF00326 Prolyl oligopeptidase family CMS_RS08380 PF07676 WD40-like Beta Propeller Repeat CMS_RS08385 PF00293 NUDIX domain CMS_RS08390 PF01738 Dienelactone hydrolase family CMS_RS08395 PF00356 Bacterial regulatory proteins, lacI family CMS_RS08395 PF13377 Periplasmic binding protein-like domain CMS_RS08400 PF04616 Glycosyl hydrolases family 43 CMS_RS08405 PF01547 Bacterial extracellular solute-binding protein CMS_RS08410 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS08430 PF00933 Glycosyl hydrolase family 3 N terminal domain CMS_RS08430 PF01915 Glycosyl hydrolase family 3 C-terminal domain CMS_RS08430 PF14310 Fibronectin type III-like domain CMS_RS08435 PF07690 Major Facilitator Superfamily CMS_RS08440 PF00933 Glycosyl hydrolase family 3 N terminal domain CMS_RS08440 PF01915 Glycosyl hydrolase family 3 C-terminal domain CMS_RS08440 PF14310 Fibronectin type III-like domain CMS_RS08445 PF00356 Bacterial regulatory proteins, lacI family CMS_RS08445 PF13377 Periplasmic binding protein-like domain CMS_RS08450 PF00703 Glycosyl hydrolases family 2 CMS_RS08450 PF02836 Glycosyl hydrolases family 2, TIM barrel domain CMS_RS08450 PF02837 Glycosyl hydrolases family 2, sugar binding domain CMS_RS08450 PF16355 CMS_RS08450 CMS_RS08460 PF00893 Small Multidrug Resistance protein CMS_RS08465 PF00893 Small Multidrug Resistance protein CMS_RS08470 PF00440 Bacterial regulatory proteins, tetR family CMS_RS08475 PF00581 Rhodanese-like domain CMS_RS08475 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMS_RS08475 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS08480 PF00581 Rhodanese-like domain CMS_RS08485 PF02583 Metal-sensitive transcriptional repressor CMS_RS08500 PF13460 NADH(P)-binding CMS_RS08505 PF00665 Integrase core domain CMS_RS08505 PF13011 CMS_RS08505 CMS_RS08515 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMS_RS08515 PF03129 Anticodon binding domain CMS_RS08520 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS08520 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CMS_RS08525 PF01255 Putative undecaprenyl diphosphate synthase CMS_RS08530 PF02565 Recombination protein O C terminal CMS_RS08530 PF11967 Recombination protein O N terminal CMS_RS08535 PF03458 CMS_RS08535 CMS_RS08540 PF00682 HMGL-like CMS_RS08540 PF08502 LeuA allosteric (dimerisation) domain CMS_RS08545 PF09924 Uncharacterized conserved protein (DUF2156) CMS_RS08550 PF00756 Putative esterase CMS_RS08555 PF00072 Response regulator receiver domain CMS_RS08555 PF00196 Bacterial regulatory proteins, luxR family CMS_RS08560 PF07730 Histidine kinase CMS_RS08565 PF01926 50S ribosome-binding GTPase CMS_RS08565 PF07650 KH domain CMS_RS08570 PF00571 CBS domain CMS_RS08570 PF01595 CMS_RS08570 CMS_RS08570 PF03471 Transporter associated domain CMS_RS08575 PF02130 Uncharacterized protein family UPF0054 CMS_RS08580 PF02562 PhoH-like protein CMS_RS08585 PF01230 HIT domain CMS_RS08590 PF04452 RNA methyltransferase CMS_RS08595 PF00226 DnaJ domain CMS_RS08595 PF00684 DnaJ central domain CMS_RS08595 PF01556 DnaJ C terminal domain CMS_RS08605 PF09685 CMS_RS08605 CMS_RS08615 PF04055 Radical SAM superfamily CMS_RS08620 PF13242 HAD-hyrolase-like CMS_RS08625 PF09348 CMS_RS08625 CMS_RS08650 PF00009 Elongation factor Tu GTP binding domain CMS_RS08650 PF00679 Elongation factor G C-terminus CMS_RS08650 PF06421 GTP-binding protein LepA C-terminus CMS_RS08660 PF04542 Sigma-70 region 2 CMS_RS08660 PF08281 Sigma-70, region 4 CMS_RS08665 PF01370 NAD dependent epimerase/dehydratase family CMS_RS08665 PF08338 Domain of unknown function (DUF1731) CMS_RS08670 PF01979 Amidohydrolase family CMS_RS08675 PF00293 NUDIX domain CMS_RS08680 PF01649 Ribosomal protein S20 CMS_RS08705 PF10531 SLBB domain CMS_RS08705 PF12836 Helix-hairpin-helix motif CMS_RS08710 PF00133 tRNA synthetases class I (I, L, M and V) CMS_RS08710 PF08264 Anticodon-binding domain of tRNA CMS_RS08710 PF09334 tRNA synthetases class I (M) CMS_RS08710 PF13603 Leucyl-tRNA synthetase, Domain 2 CMS_RS08715 PF00425 chorismate binding enzyme CMS_RS08720 PF01063 Aminotransferase class IV CMS_RS08725 PF00005 ABC transporter CMS_RS08725 PF00664 ABC transporter transmembrane region CMS_RS08730 PF00005 ABC transporter CMS_RS08730 PF00664 ABC transporter transmembrane region CMS_RS08735 PF00665 Integrase core domain CMS_RS08735 PF13011 CMS_RS08735 CMS_RS08740 PF02322 CMS_RS08740 CMS_RS08745 PF01654 CMS_RS08745 CMS_RS08755 PF00583 Acetyltransferase (GNAT) family CMS_RS08760 PF00583 Acetyltransferase (GNAT) family CMS_RS08765 PF01040 UbiA prenyltransferase family CMS_RS08770 PF01494 FAD binding domain CMS_RS08775 PF13649 Methyltransferase domain CMS_RS08780 PF00195 Chalcone and stilbene synthases, N-terminal domain CMS_RS08780 PF02797 Chalcone and stilbene synthases, C-terminal domain CMS_RS08785 PF12277 CMS_RS08785 CMS_RS08790 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CMS_RS08795 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS08800 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS08805 PF00005 ABC transporter CMS_RS08810 PF02586 Uncharacterised ACR, COG2135 CMS_RS08815 PF09949 CMS_RS08815 CMS_RS08820 PF00248 Aldo/keto reductase family CMS_RS08830 PF04973 CMS_RS08830 CMS_RS08835 PF03816 Cell envelope-related transcriptional attenuator domain CMS_RS08840 PF01738 Dienelactone hydrolase family CMS_RS08845 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CMS_RS08845 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CMS_RS08855 PF06081 CMS_RS08855 CMS_RS08860 PF12697 Alpha/beta hydrolase family CMS_RS08865 PF00561 alpha/beta hydrolase fold CMS_RS08875 PF00107 Zinc-binding dehydrogenase CMS_RS08875 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS08880 PF00665 Integrase core domain CMS_RS08880 PF13011 CMS_RS08880 CMS_RS08885 PF07690 Major Facilitator Superfamily CMS_RS08895 PF12697 Alpha/beta hydrolase family CMS_RS08900 PF00155 Aminotransferase class I and II CMS_RS08905 PF00106 short chain dehydrogenase CMS_RS08910 PF00270 DEAD/DEAH box helicase CMS_RS08910 PF00271 Helicase conserved C-terminal domain CMS_RS08910 PF12029 CMS_RS08910 CMS_RS08920 PF00106 short chain dehydrogenase CMS_RS08925 PF00381 PTS HPr component phosphorylation site CMS_RS08930 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CMS_RS08930 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CMS_RS08935 PF00294 pfkB family carbohydrate kinase CMS_RS08940 PF00455 CMS_RS08940 CMS_RS08940 PF08220 DeoR-like helix-turn-helix domain CMS_RS08945 PF13472 GDSL-like Lipase/Acylhydrolase family CMS_RS08955 PF08378 CMS_RS08955 CMS_RS08965 PF13453 CMS_RS08965 CMS_RS08970 PF02410 Oligomerisation domain CMS_RS08980 PF01467 Cytidylyltransferase CMS_RS08990 PF00171 Aldehyde dehydrogenase family CMS_RS08995 PF00696 Amino acid kinase family CMS_RS09000 PF01018 GTP1/OBG CMS_RS09000 PF01926 50S ribosome-binding GTPase CMS_RS09000 PF09269 Domain of unknown function (DUF1967) CMS_RS09005 PF01016 Ribosomal L27 protein CMS_RS09010 PF00829 Ribosomal prokaryotic L21 protein CMS_RS09015 PF13223 CMS_RS09015 CMS_RS09020 PF10150 Ribonuclease E/G family CMS_RS09025 PF07884 Vitamin K epoxide reductase family CMS_RS09030 PF00334 Nucleoside diphosphate kinase CMS_RS09035 PF14017 CMS_RS09035 CMS_RS09040 PF02875 Mur ligase family, glutamate ligase domain CMS_RS09040 PF08245 Mur ligase middle domain CMS_RS09045 PF00133 tRNA synthetases class I (I, L, M and V) CMS_RS09045 PF08264 Anticodon-binding domain of tRNA CMS_RS09050 PF00665 Integrase core domain CMS_RS09050 PF13011 CMS_RS09050 CMS_RS09060 PF13472 GDSL-like Lipase/Acylhydrolase family CMS_RS09070 PF11066 CMS_RS09070 CMS_RS09070 PF13460 NADH(P)-binding CMS_RS09075 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CMS_RS09080 PF00480 ROK family CMS_RS09085 PF07690 Major Facilitator Superfamily CMS_RS09090 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CMS_RS09105 PF01687 Riboflavin kinase CMS_RS09105 PF06574 FAD synthetase CMS_RS09120 PF01509 TruB family pseudouridylate synthase (N terminal domain) CMS_RS09120 PF09142 tRNA Pseudouridine synthase II, C terminal CMS_RS09120 PF16198 CMS_RS09120 CMS_RS09125 PF02558 Ketopantoate reductase PanE/ApbA CMS_RS09125 PF08546 Ketopantoate reductase PanE/ApbA C terminal CMS_RS09135 PF00633 Helix-hairpin-helix motif CMS_RS09135 PF00730 HhH-GPD superfamily base excision DNA repair protein CMS_RS09135 PF10576 Iron-sulfur binding domain of endonuclease III CMS_RS09140 PF02033 Ribosome-binding factor A CMS_RS09145 PF00009 Elongation factor Tu GTP binding domain CMS_RS09145 PF04760 Translation initiation factor IF-2, N-terminal region CMS_RS09145 PF11987 Translation-initiation factor 2 CMS_RS09150 PF04296 Protein of unknown function (DUF448) CMS_RS09155 PF08529 NusA N-terminal domain CMS_RS09155 PF13184 NusA-like KH domain CMS_RS09160 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CMS_RS09160 PF03129 Anticodon binding domain CMS_RS09160 PF04073 Aminoacyl-tRNA editing domain CMS_RS09165 PF01370 NAD dependent epimerase/dehydratase family CMS_RS09170 PF00501 AMP-binding enzyme CMS_RS09170 PF00561 alpha/beta hydrolase fold CMS_RS09175 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CMS_RS09175 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CMS_RS09180 PF04551 GcpE protein CMS_RS09185 PF02163 Peptidase family M50 CMS_RS09185 PF13180 PDZ domain CMS_RS09190 PF00069 Protein kinase domain CMS_RS09200 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CMS_RS09200 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal CMS_RS09200 PF13288 DXP reductoisomerase C-terminal domain CMS_RS09205 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CMS_RS09210 PF00665 Integrase core domain CMS_RS09210 PF13011 CMS_RS09210 CMS_RS09220 PF13649 Methyltransferase domain CMS_RS09225 PF13803 CMS_RS09225 CMS_RS09230 PF00270 DEAD/DEAH box helicase CMS_RS09230 PF00271 Helicase conserved C-terminal domain CMS_RS09230 PF03880 DbpA RNA binding domain CMS_RS09235 PF00665 Integrase core domain CMS_RS09235 PF13936 Helix-turn-helix domain CMS_RS09250 PF13302 Acetyltransferase (GNAT) domain CMS_RS09255 PF12697 Alpha/beta hydrolase family CMS_RS09260 PF00135 Carboxylesterase family CMS_RS09265 PF00440 Bacterial regulatory proteins, tetR family CMS_RS09265 PF13977 Bacterial transcriptional repressor CMS_RS09270 PF01451 Low molecular weight phosphotyrosine protein phosphatase CMS_RS09275 PF12840 Helix-turn-helix domain CMS_RS09280 PF01545 Cation efflux family CMS_RS09300 PF12823 CMS_RS09300 CMS_RS09305 PF02588 CMS_RS09305 CMS_RS09325 PF07691 PA14 domain CMS_RS09330 PF07691 PA14 domain CMS_RS09335 PF04954 Siderophore-interacting protein CMS_RS09335 PF08021 Siderophore-interacting FAD-binding domain CMS_RS09340 PF03099 Biotin/lipoate A/B protein ligase family CMS_RS09345 PF04055 Radical SAM superfamily CMS_RS09345 PF16881 CMS_RS09345 CMS_RS09350 PF03551 Transcriptional regulator PadR-like family CMS_RS09355 PF03109 CMS_RS09355 CMS_RS09370 PF03699 CMS_RS09370 CMS_RS09375 PF05362 Lon protease (S16) C-terminal proteolytic domain CMS_RS09375 PF13180 PDZ domain CMS_RS09380 PF10103 Uncharacterised conserved protein (DUF2342) CMS_RS09390 PF13245 Part of AAA domain CMS_RS09390 PF13361 UvrD-like helicase C-terminal domain CMS_RS09395 PF00293 NUDIX domain CMS_RS09395 PF09296 NADH pyrophosphatase-like rudimentary NUDIX domain CMS_RS09395 PF09297 NADH pyrophosphatase zinc ribbon domain CMS_RS09400 PF01636 Phosphotransferase enzyme family CMS_RS09405 PF00580 UvrD/REP helicase N-terminal domain CMS_RS09405 PF12705 PD-(D/E)XK nuclease superfamily CMS_RS09405 PF13361 UvrD-like helicase C-terminal domain CMS_RS09410 PF12705 PD-(D/E)XK nuclease superfamily CMS_RS09410 PF13245 Part of AAA domain CMS_RS09415 PF11305 CMS_RS09415 CMS_RS09425 PF13794 tRNA-(MS[2]IO[6]A)-hydroxylase (MiaE)-like CMS_RS09430 PF00270 DEAD/DEAH box helicase CMS_RS09430 PF00271 Helicase conserved C-terminal domain CMS_RS09435 PF00665 Integrase core domain CMS_RS09435 PF13011 CMS_RS09435 CMS_RS09440 PF02811 PHP domain CMS_RS09450 PF00557 Metallopeptidase family M24 CMS_RS09450 PF05195 Aminopeptidase P, N-terminal domain CMS_RS09460 PF00571 CBS domain CMS_RS09460 PF03448 MgtE intracellular N domain CMS_RS09465 PF06210 CMS_RS09465 CMS_RS09470 PF01883 Domain of unknown function DUF59 CMS_RS09470 PF10609 ParA/MinD ATPase like CMS_RS09475 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS09475 PF03466 LysR substrate binding domain CMS_RS09485 PF01596 O-methyltransferase CMS_RS09490 PF00665 Integrase core domain CMS_RS09490 PF13011 CMS_RS09490 CMS_RS09500 PF01546 Peptidase family M20/M25/M40 CMS_RS09500 PF07687 Peptidase dimerisation domain CMS_RS09505 PF14602 Hexapeptide repeat of succinyl-transferase CMS_RS09505 PF14789 Tetrahydrodipicolinate N-succinyltransferase middle CMS_RS09510 PF13672 Protein phosphatase 2C CMS_RS09520 PF01037 AsnC family CMS_RS09520 PF13404 AsnC-type helix-turn-helix domain CMS_RS09525 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CMS_RS09525 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CMS_RS09530 PF03352 Methyladenine glycosylase CMS_RS09535 PF03883 CMS_RS09535 CMS_RS09540 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CMS_RS09545 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMS_RS09545 PF02874 ATP synthase alpha/beta family, beta-barrel domain CMS_RS09550 PF00231 ATP synthase CMS_RS09555 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CMS_RS09555 PF00306 ATP synthase alpha/beta chain, C terminal domain CMS_RS09555 PF02874 ATP synthase alpha/beta family, beta-barrel domain CMS_RS09560 PF00213 ATP synthase delta (OSCP) subunit CMS_RS09565 PF00430 ATP synthase B/B' CF(0) CMS_RS09570 PF00137 ATP synthase subunit C CMS_RS09575 PF00119 ATP synthase A chain CMS_RS09585 PF01212 Beta-eliminating lyase CMS_RS09590 PF07751 CMS_RS09590 CMS_RS09595 PF00311 Phosphoenolpyruvate carboxylase CMS_RS09600 PF07690 Major Facilitator Superfamily CMS_RS09605 PF01370 NAD dependent epimerase/dehydratase family CMS_RS09610 PF00196 Bacterial regulatory proteins, luxR family CMS_RS09630 PF04851 Type III restriction enzyme, res subunit CMS_RS09635 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CMS_RS09635 PF02770 Acyl-CoA dehydrogenase, middle domain CMS_RS09635 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CMS_RS09640 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS09645 PF13472 GDSL-like Lipase/Acylhydrolase family CMS_RS09650 PF00768 D-alanyl-D-alanine carboxypeptidase CMS_RS09655 PF00588 SpoU rRNA Methylase family CMS_RS09660 PF02146 Sir2 family CMS_RS09665 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS09670 PF00534 Glycosyl transferases group 1 CMS_RS09670 PF13439 Glycosyltransferase Family 4 CMS_RS09675 PF12697 Alpha/beta hydrolase family CMS_RS09680 PF00128 Alpha amylase, catalytic domain CMS_RS09680 PF16657 CMS_RS09680 CMS_RS09685 PF00929 Exonuclease CMS_RS09690 PF01197 Ribosomal protein L31 CMS_RS09695 PF00005 ABC transporter CMS_RS09700 PF00534 Glycosyl transferases group 1 CMS_RS09700 PF13439 Glycosyltransferase Family 4 CMS_RS09705 PF00483 Nucleotidyl transferase CMS_RS09710 PF12710 haloacid dehalogenase-like hydrolase CMS_RS09715 PF01636 Phosphotransferase enzyme family CMS_RS09720 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS09735 PF02104 CMS_RS09735 CMS_RS09740 PF00005 ABC transporter CMS_RS09740 PF12848 ABC transporter CMS_RS09745 PF01883 Domain of unknown function DUF59 CMS_RS09750 PF00005 ABC transporter CMS_RS09755 PF00355 Rieske [2Fe-2S] domain CMS_RS09760 PF01458 Uncharacterized protein family (UPF0051) CMS_RS09765 PF01458 Uncharacterized protein family (UPF0051) CMS_RS09770 PF02628 CMS_RS09770 CMS_RS09775 PF01040 UbiA prenyltransferase family CMS_RS09780 PF00456 Transketolase, thiamine diphosphate binding domain CMS_RS09780 PF02779 Transketolase, pyrimidine binding domain CMS_RS09780 PF02780 Transketolase, C-terminal domain CMS_RS09785 PF00923 Transaldolase CMS_RS09795 PF00479 Glucose-6-phosphate dehydrogenase, NAD binding domain CMS_RS09795 PF02781 Glucose-6-phosphate dehydrogenase, C-terminal domain CMS_RS09800 PF10128 CMS_RS09800 CMS_RS09805 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CMS_RS09810 PF13397 Domain of unknown function (DUF4109) CMS_RS09815 PF03840 Preprotein translocase SecG subunit CMS_RS09820 PF00121 Triosephosphate isomerase CMS_RS09825 PF00162 Phosphoglycerate kinase CMS_RS09830 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CMS_RS09830 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CMS_RS09835 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CMS_RS09835 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CMS_RS09840 PF02650 WhiA C-terminal HTH domain CMS_RS09840 PF10298 WhiA N-terminal LAGLIDADG-like domain CMS_RS09840 PF14527 WhiA LAGLIDADG-like domain CMS_RS09845 PF03668 CMS_RS09845 CMS_RS09850 PF01541 GIY-YIG catalytic domain CMS_RS09850 PF02151 UvrB/uvrC motif CMS_RS09850 PF08459 UvrC Helix-hairpin-helix N-terminal CMS_RS09850 PF14520 Helix-hairpin-helix domain CMS_RS09855 PF00005 ABC transporter CMS_RS09860 PF00271 Helicase conserved C-terminal domain CMS_RS09860 PF02151 UvrB/uvrC motif CMS_RS09860 PF04851 Type III restriction enzyme, res subunit CMS_RS09860 PF12344 Ultra-violet resistance protein B CMS_RS09865 PF01121 Dephospho-CoA kinase CMS_RS09870 PF00575 S1 RNA binding domain CMS_RS09875 PF05960 Bacterial protein of unknown function (DUF885) CMS_RS09880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CMS_RS09885 PF00476 DNA polymerase family A CMS_RS09885 PF01367 5'-3' exonuclease, C-terminal SAM fold CMS_RS09885 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CMS_RS09890 PF03061 Thioesterase superfamily CMS_RS09895 PF00665 Integrase core domain CMS_RS09895 PF13011 CMS_RS09895 CMS_RS09905 PF00072 Response regulator receiver domain CMS_RS09905 PF03861 ANTAR domain CMS_RS09915 PF00224 Pyruvate kinase, barrel domain CMS_RS09915 PF02887 Pyruvate kinase, alpha/beta domain CMS_RS09920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS09920 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CMS_RS09925 PF00310 Glutamine amidotransferases class-II CMS_RS09925 PF01493 GXGXG motif CMS_RS09925 PF01645 Conserved region in glutamate synthase CMS_RS09925 PF04898 Glutamate synthase central domain CMS_RS09930 PF01790 CMS_RS09930 CMS_RS09935 PF00290 Tryptophan synthase alpha chain CMS_RS09940 PF00291 Pyridoxal-phosphate dependent enzyme CMS_RS09945 PF00218 Indole-3-glycerol phosphate synthase CMS_RS09960 PF00425 chorismate binding enzyme CMS_RS09960 PF04715 Anthranilate synthase component I, N terminal region CMS_RS09965 PF01502 Phosphoribosyl-AMP cyclohydrolase CMS_RS09970 PF00977 Histidine biosynthesis protein CMS_RS09975 PF01634 ATP phosphoribosyltransferase CMS_RS09975 PF08029 HisG, C-terminal domain CMS_RS09980 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CMS_RS09990 PF00834 Ribulose-phosphate 3 epimerase family CMS_RS09995 PF01029 NusB family CMS_RS09995 PF01189 NOL1/NOP2/sun family CMS_RS10000 PF00551 Formyl transferase CMS_RS10000 PF02911 Formyl transferase, C-terminal domain CMS_RS10010 PF00438 S-adenosylmethionine synthetase, N-terminal domain CMS_RS10010 PF02772 S-adenosylmethionine synthetase, central domain CMS_RS10010 PF02773 S-adenosylmethionine synthetase, C-terminal domain CMS_RS10015 PF02441 Flavoprotein CMS_RS10015 PF04127 DNA / pantothenate metabolism flavoprotein CMS_RS10020 PF01192 RNA polymerase Rpb6 CMS_RS10025 PF00625 Guanylate kinase CMS_RS10030 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CMS_RS10035 PF02142 MGS-like domain CMS_RS10035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMS_RS10035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CMS_RS10040 PF00117 Glutamine amidotransferase class-I CMS_RS10040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CMS_RS10050 PF01979 Amidohydrolase family CMS_RS10055 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CMS_RS10055 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CMS_RS10060 PF00156 Phosphoribosyl transferase domain CMS_RS10065 PF00501 AMP-binding enzyme CMS_RS10065 PF13193 AMP-binding enzyme C-terminal domain CMS_RS10065 PF16177 CMS_RS10065 CMS_RS10070 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS10075 PF09084 NMT1/THI5 like CMS_RS10080 PF00005 ABC transporter CMS_RS10085 PF00932 Lamin Tail Domain CMS_RS10085 PF13449 Esterase-like activity of phytase CMS_RS10090 PF01029 NusB family CMS_RS10095 PF01132 Elongation factor P (EF-P) OB domain CMS_RS10095 PF08207 Elongation factor P (EF-P) KOW-like domain CMS_RS10095 PF09285 Elongation factor P, C-terminal CMS_RS10100 PF01220 Dehydroquinase class II CMS_RS10110 PF00586 AIR synthase related protein, N-terminal domain CMS_RS10115 PF12028 CMS_RS10115 CMS_RS10120 PF00535 Glycosyl transferase family 2 CMS_RS10125 PF01820 D-ala D-ala ligase N-terminus CMS_RS10125 PF07478 D-ala D-ala ligase C-terminus CMS_RS10130 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CMS_RS10130 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CMS_RS10135 PF01553 Acyltransferase CMS_RS10140 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CMS_RS10145 PF00694 Aconitase C-terminal domain CMS_RS10150 PF00330 Aconitase family (aconitate hydratase) CMS_RS10155 PF13672 Protein phosphatase 2C CMS_RS10160 PF03741 CMS_RS10160 CMS_RS10165 PF00440 Bacterial regulatory proteins, tetR family CMS_RS10170 PF00106 short chain dehydrogenase CMS_RS10175 PF01053 Cys/Met metabolism PLP-dependent enzyme CMS_RS10180 PF00561 alpha/beta hydrolase fold CMS_RS10185 PF00072 Response regulator receiver domain CMS_RS10185 PF08281 Sigma-70, region 4 CMS_RS10205 PF00072 Response regulator receiver domain CMS_RS10205 PF00196 Bacterial regulatory proteins, luxR family CMS_RS10210 PF07690 Major Facilitator Superfamily CMS_RS10215 PF01910 Domain of unknown function DUF77 CMS_RS10220 PF04264 YceI-like domain CMS_RS10225 PF01256 Carbohydrate kinase CMS_RS10230 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CMS_RS10235 PF00571 CBS domain CMS_RS10235 PF01595 CMS_RS10235 CMS_RS10240 PF00571 CBS domain CMS_RS10240 PF01595 CMS_RS10240 CMS_RS10240 PF03471 Transporter associated domain CMS_RS10250 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CMS_RS10250 PF00676 Dehydrogenase E1 component CMS_RS10250 PF02779 Transketolase, pyrimidine binding domain CMS_RS10250 PF16078 CMS_RS10250 CMS_RS10250 PF16870 CMS_RS10250 CMS_RS10255 PF00583 Acetyltransferase (GNAT) family CMS_RS10260 PF13490 Putative zinc-finger CMS_RS10265 PF04542 Sigma-70 region 2 CMS_RS10265 PF08281 Sigma-70, region 4 CMS_RS10270 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CMS_RS10275 PF03193 Protein of unknown function, DUF258 CMS_RS10280 PF00459 Inositol monophosphatase family CMS_RS10290 PF13343 Bacterial extracellular solute-binding protein CMS_RS10295 PF00005 ABC transporter CMS_RS10295 PF08402 TOBE domain CMS_RS10305 PF01668 SmpB protein CMS_RS10310 PF02687 CMS_RS10310 CMS_RS10315 PF00005 ABC transporter CMS_RS10320 PF00472 RF-1 domain CMS_RS10320 PF03462 PCRF domain CMS_RS10325 PF07690 Major Facilitator Superfamily CMS_RS10330 PF13400 CMS_RS10330 CMS_RS10340 PF07811 CMS_RS10340 CMS_RS10355 PF00482 Type II secretion system (T2SS), protein F CMS_RS10360 PF00437 Type II/IV secretion system protein CMS_RS10365 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CMS_RS10365 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CMS_RS10375 PF00291 Pyridoxal-phosphate dependent enzyme CMS_RS10380 PF09335 CMS_RS10380 CMS_RS10385 PF01545 Cation efflux family CMS_RS10390 PF01725 Ham1 family CMS_RS10395 PF01138 3' exoribonuclease family, domain 1 CMS_RS10395 PF03725 3' exoribonuclease family, domain 2 CMS_RS10400 PF01177 Asp/Glu/Hydantoin racemase CMS_RS10405 PF04244 Deoxyribodipyrimidine photo-lyase-related protein CMS_RS10415 PF11238 CMS_RS10415 CMS_RS10425 PF00005 ABC transporter CMS_RS10430 PF12804 MobA-like NTP transferase domain CMS_RS10435 PF01061 CMS_RS10435 CMS_RS10440 PF00005 ABC transporter CMS_RS10450 PF01381 Helix-turn-helix CMS_RS10465 PF00535 Glycosyl transferase family 2 CMS_RS10470 PF01066 CDP-alcohol phosphatidyltransferase CMS_RS10475 PF00535 Glycosyl transferase family 2 CMS_RS10480 PF13180 PDZ domain CMS_RS10480 PF13365 Trypsin-like peptidase domain CMS_RS10495 PF00155 Aminotransferase class I and II CMS_RS10500 PF00005 ABC transporter CMS_RS10505 PF12679 CMS_RS10505 CMS_RS10510 PF07730 Histidine kinase CMS_RS10515 PF00072 Response regulator receiver domain CMS_RS10515 PF00196 Bacterial regulatory proteins, luxR family CMS_RS10520 PF02617 ATP-dependent Clp protease adaptor protein ClpS CMS_RS10525 PF09438 CMS_RS10525 CMS_RS10530 PF01370 NAD dependent epimerase/dehydratase family CMS_RS10535 PF08713 DNA alkylation repair enzyme CMS_RS10540 PF04228 CMS_RS10540 CMS_RS10545 PF00665 Integrase core domain CMS_RS10545 PF13011 CMS_RS10545 CMS_RS10555 PF00072 Response regulator receiver domain CMS_RS10555 PF00486 Transcriptional regulatory protein, C terminal CMS_RS10560 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS10560 PF00672 HAMP domain CMS_RS10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS10565 PF14367 CMS_RS10565 CMS_RS10570 PF06114 Domain of unknown function (DUF955) CMS_RS10575 PF12697 Alpha/beta hydrolase family CMS_RS10580 PF04940 Sensors of blue-light using FAD CMS_RS10585 PF13671 AAA domain CMS_RS10590 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS10595 PF01047 MarR family CMS_RS10600 PF00709 Adenylosuccinate synthetase CMS_RS10605 PF11349 CMS_RS10605 CMS_RS10610 PF00149 Calcineurin-like phosphoesterase CMS_RS10610 PF12320 Type 5 capsule protein repressor C-terminal domain CMS_RS10615 PF13476 AAA domain CMS_RS10615 PF13558 Putative exonuclease SbcCD, C subunit CMS_RS10640 PF00440 Bacterial regulatory proteins, tetR family CMS_RS10650 PF12698 ABC-2 family transporter protein CMS_RS10660 PF01966 HD domain CMS_RS10665 PF00149 Calcineurin-like phosphoesterase CMS_RS10665 PF13385 Concanavalin A-like lectin/glucanases superfamily CMS_RS10670 PF01381 Helix-turn-helix CMS_RS10675 PF07804 HipA-like C-terminal domain CMS_RS10675 PF13657 HipA N-terminal domain CMS_RS10680 PF01613 Flavin reductase like domain CMS_RS10685 PF00037 4Fe-4S binding domain CMS_RS10690 PF00376 MerR family regulatory protein CMS_RS10690 PF09278 MerR, DNA binding CMS_RS10695 PF00665 Integrase core domain CMS_RS10695 PF13011 CMS_RS10695 CMS_RS10700 PF00270 DEAD/DEAH box helicase CMS_RS10700 PF00271 Helicase conserved C-terminal domain CMS_RS10715 PF10013 CMS_RS10715 CMS_RS10715 PF11625 Protein of unknown function (DUF3253) CMS_RS10725 PF13515 CMS_RS10725 CMS_RS10735 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS10735 PF03466 LysR substrate binding domain CMS_RS10745 PF09852 CMS_RS10745 CMS_RS10750 PF03600 Citrate transporter CMS_RS10760 PF00072 Response regulator receiver domain CMS_RS10760 PF09339 IclR helix-turn-helix domain CMS_RS10770 PF00293 NUDIX domain CMS_RS10780 PF00561 alpha/beta hydrolase fold CMS_RS10785 PF00295 Glycosyl hydrolases family 28 CMS_RS10800 PF13646 HEAT repeats CMS_RS10805 PF01988 CMS_RS10805 CMS_RS10810 PF01435 Peptidase family M48 CMS_RS10815 PF01047 MarR family CMS_RS10820 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS10830 PF01939 Protein of unknown function DUF91 CMS_RS10835 PF01402 Ribbon-helix-helix protein, copG family CMS_RS10840 PF00892 EamA-like transporter family CMS_RS10845 PF12697 Alpha/beta hydrolase family CMS_RS10850 PF13302 Acetyltransferase (GNAT) domain CMS_RS10855 PF00665 Integrase core domain CMS_RS10855 PF13011 CMS_RS10855 CMS_RS10860 PF00665 Integrase core domain CMS_RS10860 PF13011 CMS_RS10860 CMS_RS10865 PF02566 OsmC-like protein CMS_RS10870 PF00202 Aminotransferase class-III CMS_RS10875 PF06089 CMS_RS10875 CMS_RS10880 PF01580 FtsK/SpoIIIE family CMS_RS10890 PF01882 CMS_RS10890 CMS_RS10895 PF07726 ATPase family associated with various cellular activities (AAA) CMS_RS10910 PF00285 Citrate synthase CMS_RS10915 PF00155 Aminotransferase class I and II CMS_RS10920 PF00037 4Fe-4S binding domain CMS_RS10925 PF02585 GlcNAc-PI de-N-acetylase CMS_RS10930 PF03239 CMS_RS10930 CMS_RS10935 PF09375 Imelysin CMS_RS10940 PF04261 Dyp-type peroxidase family CMS_RS10950 PF00009 Elongation factor Tu GTP binding domain CMS_RS10950 PF00679 Elongation factor G C-terminus CMS_RS10950 PF03144 Elongation factor Tu domain 2 CMS_RS10955 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMS_RS10960 PF00005 ABC transporter CMS_RS10960 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CMS_RS10965 PF10756 CMS_RS10965 CMS_RS10975 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS10985 PF02517 CAAX protease self-immunity CMS_RS10990 PF04341 CMS_RS10990 CMS_RS10995 PF00474 Sodium:solute symporter family CMS_RS11000 PF02347 Glycine cleavage system P-protein CMS_RS11005 PF01597 Glycine cleavage H-protein CMS_RS11010 PF01571 Aminomethyltransferase folate-binding domain CMS_RS11010 PF08669 Glycine cleavage T-protein C-terminal barrel domain CMS_RS11015 PF07179 CMS_RS11015 CMS_RS11020 PF03965 Penicillinase repressor CMS_RS11025 PF00665 Integrase core domain CMS_RS11025 PF13011 CMS_RS11025 CMS_RS11030 PF02567 Phenazine biosynthesis-like protein CMS_RS11035 PF06724 CMS_RS11035 CMS_RS11040 PF01594 CMS_RS11040 CMS_RS11045 PF02474 CMS_RS11045 CMS_RS11050 PF00583 Acetyltransferase (GNAT) family CMS_RS11060 PF03211 Pectate lyase CMS_RS11065 PF00199 Catalase CMS_RS11065 PF06628 Catalase-related immune-responsive CMS_RS11070 PF01475 Ferric uptake regulator family CMS_RS11075 PF00248 Aldo/keto reductase family CMS_RS11080 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain CMS_RS11085 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS11090 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS11095 PF04055 Radical SAM superfamily CMS_RS11100 PF09334 tRNA synthetases class I (M) CMS_RS11110 PF00795 Carbon-nitrogen hydrolase CMS_RS11115 PF00392 Bacterial regulatory proteins, gntR family CMS_RS11115 PF07729 FCD domain CMS_RS11120 PF07690 Major Facilitator Superfamily CMS_RS11125 PF11010 CMS_RS11125 CMS_RS11130 PF02700 Phosphoribosylformylglycinamidine (FGAM) synthase CMS_RS11135 PF13507 CobB/CobQ-like glutamine amidotransferase domain CMS_RS11140 PF00586 AIR synthase related protein, N-terminal domain CMS_RS11140 PF02769 AIR synthase related protein, C-terminal domain CMS_RS11145 PF01738 Dienelactone hydrolase family CMS_RS11150 PF03372 Endonuclease/Exonuclease/phosphatase family CMS_RS11155 PF13472 GDSL-like Lipase/Acylhydrolase family CMS_RS11160 PF01757 CMS_RS11160 CMS_RS11165 PF01757 CMS_RS11165 CMS_RS11170 PF02706 Chain length determinant protein CMS_RS11170 PF13614 AAA domain CMS_RS11175 PF01451 Low molecular weight phosphotyrosine protein phosphatase CMS_RS11180 PF02397 CMS_RS11180 CMS_RS11180 PF13727 CoA-binding domain CMS_RS11185 PF00534 Glycosyl transferases group 1 CMS_RS11190 PF13692 Glycosyl transferases group 1 CMS_RS11200 PF04230 CMS_RS11200 CMS_RS11210 PF00665 Integrase core domain CMS_RS11210 PF13011 CMS_RS11210 CMS_RS11220 PF13196 CMS_RS11220 CMS_RS11225 PF02698 DUF218 domain CMS_RS11230 PF03372 Endonuclease/Exonuclease/phosphatase family CMS_RS11240 PF07690 Major Facilitator Superfamily CMS_RS11245 PF00156 Phosphoribosyl transferase domain CMS_RS11250 PF00834 Ribulose-phosphate 3 epimerase family CMS_RS11255 PF00156 Phosphoribosyl transferase domain CMS_RS11255 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CMS_RS11270 PF13377 Periplasmic binding protein-like domain CMS_RS11275 PF01817 Chorismate mutase type II CMS_RS11280 PF02566 OsmC-like protein CMS_RS11285 PF00072 Response regulator receiver domain CMS_RS11285 PF00196 Bacterial regulatory proteins, luxR family CMS_RS11290 PF07730 Histidine kinase CMS_RS11295 PF00144 Beta-lactamase CMS_RS11300 PF13669 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS11315 PF13302 Acetyltransferase (GNAT) domain CMS_RS11320 PF00665 Integrase core domain CMS_RS11320 PF13011 CMS_RS11320 CMS_RS11325 PF04234 CopC domain CMS_RS11330 PF00266 Aminotransferase class-V CMS_RS11335 PF01592 NifU-like N terminal domain CMS_RS11340 PF06150 ChaB CMS_RS11345 PF13302 Acetyltransferase (GNAT) domain CMS_RS11350 PF14311 CMS_RS11350 CMS_RS11355 PF10544 CMS_RS11355 CMS_RS11370 PF13520 Amino acid permease CMS_RS11375 PF00582 Universal stress protein family CMS_RS11385 PF00665 Integrase core domain CMS_RS11385 PF13011 CMS_RS11385 CMS_RS11390 PF00892 EamA-like transporter family CMS_RS11395 PF00288 GHMP kinases N terminal domain CMS_RS11395 PF08544 GHMP kinases C terminal CMS_RS11400 PF00398 Ribosomal RNA adenine dimethylase CMS_RS11405 PF01026 TatD related DNase CMS_RS11410 PF08264 Anticodon-binding domain of tRNA CMS_RS11410 PF09334 tRNA synthetases class I (M) CMS_RS11425 PF00285 Citrate synthase CMS_RS11430 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CMS_RS11430 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS11445 PF08242 Methyltransferase domain CMS_RS11445 PF12623 RNA repair, ligase-Pnkp-associating, region of Hen1 CMS_RS11450 PF00149 Calcineurin-like phosphoesterase CMS_RS11450 PF13671 AAA domain CMS_RS11450 PF16536 CMS_RS11450 CMS_RS11450 PF16542 CMS_RS11450 CMS_RS11455 PF13714 Phosphoenolpyruvate phosphomutase CMS_RS11460 PF03972 MmgE/PrpD family CMS_RS11465 PF00583 Acetyltransferase (GNAT) family CMS_RS11475 PF13350 Tyrosine phosphatase family CMS_RS11485 PF06081 CMS_RS11485 CMS_RS11490 PF00892 EamA-like transporter family CMS_RS11495 PF07336 Protein of unknown function (DUF1470) CMS_RS11495 PF11706 CGNR zinc finger CMS_RS11500 PF00665 Integrase core domain CMS_RS11500 PF13011 CMS_RS11500 CMS_RS11505 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CMS_RS11515 PF07681 CMS_RS11515 CMS_RS11520 PF00128 Alpha amylase, catalytic domain CMS_RS11535 PF02366 CMS_RS11535 CMS_RS11535 PF16192 CMS_RS11535 CMS_RS11540 PF03601 CMS_RS11540 CMS_RS11545 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS11550 PF08279 HTH domain CMS_RS11550 PF13280 CMS_RS11550 CMS_RS11560 PF13380 CoA binding domain CMS_RS11565 PF00665 Integrase core domain CMS_RS11565 PF13011 CMS_RS11565 CMS_RS11570 PF04248 Domain of unknown function (DUF427) CMS_RS11575 PF04226 CMS_RS11575 CMS_RS11585 PF03313 CMS_RS11585 CMS_RS11585 PF03315 Serine dehydratase beta chain CMS_RS11590 PF13630 CMS_RS11590 CMS_RS11605 PF01614 Bacterial transcriptional regulator CMS_RS11605 PF09339 IclR helix-turn-helix domain CMS_RS11610 PF01370 NAD dependent epimerase/dehydratase family CMS_RS11615 PF01547 Bacterial extracellular solute-binding protein CMS_RS11620 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS11625 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS11630 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CMS_RS11630 PF13378 Enolase C-terminal domain-like CMS_RS11635 PF00701 Dihydrodipicolinate synthetase family CMS_RS11640 PF00665 Integrase core domain CMS_RS11640 PF13011 CMS_RS11640 CMS_RS11645 PF03190 Protein of unknown function, DUF255 CMS_RS11650 PF01544 CorA-like Mg2+ transporter protein CMS_RS11660 PF00501 AMP-binding enzyme CMS_RS11660 PF13193 AMP-binding enzyme C-terminal domain CMS_RS11665 PF00270 DEAD/DEAH box helicase CMS_RS11665 PF00271 Helicase conserved C-terminal domain CMS_RS11665 PF04408 Helicase associated domain (HA2) CMS_RS11665 PF07717 Oligonucleotide/oligosaccharide-binding (OB)-fold CMS_RS11665 PF11898 CMS_RS11665 CMS_RS11675 PF00392 Bacterial regulatory proteins, gntR family CMS_RS11675 PF07729 FCD domain CMS_RS11680 PF00289 Carbamoyl-phosphate synthase L chain, N-terminal domain CMS_RS11680 PF00364 Biotin-requiring enzyme CMS_RS11680 PF02626 Allophanate hydrolase subunit 2 CMS_RS11680 PF02682 Allophanate hydrolase subunit 1 CMS_RS11680 PF02785 Biotin carboxylase C-terminal domain CMS_RS11680 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CMS_RS11685 PF01425 Amidase CMS_RS11690 PF13238 AAA domain CMS_RS11695 PF00581 Rhodanese-like domain CMS_RS11700 PF00583 Acetyltransferase (GNAT) family CMS_RS11705 PF00268 Ribonucleotide reductase, small chain CMS_RS11710 PF00317 Ribonucleotide reductase, all-alpha domain CMS_RS11710 PF02867 Ribonucleotide reductase, barrel domain CMS_RS11710 PF03477 ATP cone domain CMS_RS11715 PF07690 Major Facilitator Superfamily CMS_RS11725 PF00248 Aldo/keto reductase family CMS_RS11735 PF13180 PDZ domain CMS_RS11735 PF13365 Trypsin-like peptidase domain CMS_RS11740 PF00665 Integrase core domain CMS_RS11740 PF13936 Helix-turn-helix domain CMS_RS11745 PF00392 Bacterial regulatory proteins, gntR family CMS_RS11745 PF07729 FCD domain CMS_RS11750 PF00121 Triosephosphate isomerase CMS_RS11755 PF02502 Ribose/Galactose Isomerase CMS_RS11760 PF02733 Dak1 domain CMS_RS11760 PF02734 DAK2 domain CMS_RS11765 PF00392 Bacterial regulatory proteins, gntR family CMS_RS11765 PF07702 UTRA domain CMS_RS11770 PF00005 ABC transporter CMS_RS11775 PF02653 CMS_RS11775 CMS_RS11785 PF13440 CMS_RS11785 CMS_RS11785 PF14667 Polysaccharide biosynthesis C-terminal domain CMS_RS11795 PF00535 Glycosyl transferase family 2 CMS_RS11795 PF13641 Glycosyltransferase like family 2 CMS_RS11805 PF03441 FAD binding domain of DNA photolyase CMS_RS11810 PF01381 Helix-turn-helix CMS_RS11815 PF00156 Phosphoribosyl transferase domain CMS_RS11820 PF12728 Helix-turn-helix domain CMS_RS11835 PF02706 Chain length determinant protein CMS_RS11835 PF10609 ParA/MinD ATPase like CMS_RS11850 PF08534 Redoxin CMS_RS11855 PF00324 Amino acid permease CMS_RS11860 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS11865 PF11290 CMS_RS11865 CMS_RS11875 PF01926 50S ribosome-binding GTPase CMS_RS11875 PF06071 Protein of unknown function (DUF933) CMS_RS11880 PF00929 Exonuclease CMS_RS11885 PF02646 CMS_RS11885 CMS_RS11890 PF01116 Fructose-bisphosphate aldolase class-II CMS_RS11900 PF02401 LytB protein CMS_RS11905 PF02601 CMS_RS11905 CMS_RS11905 PF13742 CMS_RS11905 CMS_RS11910 PF02609 Exonuclease VII small subunit CMS_RS11915 PF14030 CMS_RS11915 CMS_RS11920 PF00484 Carbonic anhydrase CMS_RS11925 PF00206 Lyase CMS_RS11925 PF10415 Fumarase C C-terminus CMS_RS11935 PF02562 PhoH-like protein CMS_RS11935 PF13638 PIN domain CMS_RS11940 PF01255 Putative undecaprenyl diphosphate synthase CMS_RS11945 PF03006 CMS_RS11945 CMS_RS11950 PF13416 Bacterial extracellular solute-binding protein CMS_RS11955 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS11960 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS11970 PF02585 GlcNAc-PI de-N-acetylase CMS_RS11975 PF14155 CMS_RS11975 CMS_RS11980 PF01272 Transcription elongation factor, GreA/GreB, C-term CMS_RS11980 PF03449 Transcription elongation factor, N-terminal CMS_RS11985 PF00291 Pyridoxal-phosphate dependent enzyme CMS_RS11985 PF01842 ACT domain CMS_RS11990 PF01594 CMS_RS11990 CMS_RS11995 PF06224 CMS_RS11995 CMS_RS12005 PF04011 LemA family CMS_RS12010 PF00232 Glycosyl hydrolase family 1 CMS_RS12020 PF13520 Amino acid permease CMS_RS12025 PF13668 Ferritin-like domain CMS_RS12030 PF10129 CMS_RS12030 CMS_RS12035 PF13581 Histidine kinase-like ATPase domain CMS_RS12040 PF01740 STAS domain CMS_RS12045 PF00535 Glycosyl transferase family 2 CMS_RS12045 PF13632 Glycosyl transferase family group 2 CMS_RS12050 PF07228 Stage II sporulation protein E (SpoIIE) CMS_RS12050 PF13185 GAF domain CMS_RS12055 PF01757 CMS_RS12055 CMS_RS12075 PF13274 CMS_RS12075 CMS_RS12085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS12090 PF00082 Subtilase family CMS_RS12095 PF04417 CMS_RS12095 CMS_RS12100 PF04977 Septum formation initiator CMS_RS12105 PF00113 Enolase, C-terminal TIM barrel domain CMS_RS12105 PF03952 Enolase, N-terminal domain CMS_RS12110 PF13393 Histidyl-tRNA synthetase CMS_RS12120 PF03819 MazG nucleotide pyrophosphohydrolase domain CMS_RS12125 PF06965 Na+/H+ antiporter 1 CMS_RS12135 PF00270 DEAD/DEAH box helicase CMS_RS12135 PF00271 Helicase conserved C-terminal domain CMS_RS12135 PF02559 CarD-like/TRCF domain CMS_RS12135 PF03461 TRCF domain CMS_RS12140 PF01195 Peptidyl-tRNA hydrolase CMS_RS12145 PF01386 Ribosomal L25p family CMS_RS12145 PF14693 Ribosomal protein TL5, C-terminal domain CMS_RS12155 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain CMS_RS12155 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CMS_RS12165 PF13396 CMS_RS12165 CMS_RS12175 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CMS_RS12175 PF14572 Phosphoribosyl synthetase-associated domain CMS_RS12180 PF00132 Bacterial transferase hexapeptide (six repeats) CMS_RS12180 PF12804 MobA-like NTP transferase domain CMS_RS12190 PF12802 MarR family CMS_RS12195 PF01258 Prokaryotic dksA/traR C4-type zinc finger CMS_RS12200 PF00296 Luciferase-like monooxygenase CMS_RS12205 PF01810 CMS_RS12205 CMS_RS12215 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS12220 PF00005 ABC transporter CMS_RS12220 PF09383 NIL domain CMS_RS12225 PF03180 NLPA lipoprotein CMS_RS12240 PF00005 ABC transporter CMS_RS12245 PF07690 Major Facilitator Superfamily CMS_RS12255 PF00005 ABC transporter CMS_RS12270 PF02391 MoaE protein CMS_RS12275 PF00994 Probable molybdopterin binding domain CMS_RS12280 PF01967 MoaC family CMS_RS12285 PF00994 Probable molybdopterin binding domain CMS_RS12285 PF03453 MoeA N-terminal region (domain I and II) CMS_RS12285 PF03454 MoeA C-terminal region (domain IV) CMS_RS12295 PF13714 Phosphoenolpyruvate phosphomutase CMS_RS12300 PF01758 Sodium Bile acid symporter family CMS_RS12305 PF13738 Pyridine nucleotide-disulphide oxidoreductase CMS_RS12310 PF01048 Phosphorylase superfamily CMS_RS12315 PF01370 NAD dependent epimerase/dehydratase family CMS_RS12325 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS12335 PF07876 Stress responsive A/B Barrel Domain CMS_RS12355 PF03773 CMS_RS12355 CMS_RS12360 PF09323 CMS_RS12360 CMS_RS12370 PF01494 FAD binding domain CMS_RS12380 PF07883 Cupin domain CMS_RS12390 PF03551 Transcriptional regulator PadR-like family CMS_RS12405 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS12405 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS12410 PF00072 Response regulator receiver domain CMS_RS12410 PF00486 Transcriptional regulatory protein, C terminal CMS_RS12415 PF00535 Glycosyl transferase family 2 CMS_RS12420 PF09837 Uncharacterized protein conserved in bacteria (DUF2064) CMS_RS12435 PF00174 Oxidoreductase molybdopterin binding domain CMS_RS12440 PF09594 CMS_RS12440 CMS_RS12445 PF00005 ABC transporter CMS_RS12450 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS12455 PF13531 Bacterial extracellular solute-binding protein CMS_RS12460 PF03459 TOBE domain CMS_RS12465 PF04055 Radical SAM superfamily CMS_RS12465 PF06463 Molybdenum Cofactor Synthesis C CMS_RS12465 PF13353 4Fe-4S single cluster domain CMS_RS12470 PF02597 ThiS family CMS_RS12475 PF06983 3-demethylubiquinone-9 3-methyltransferase CMS_RS12480 PF07853 CMS_RS12480 CMS_RS12485 PF00392 Bacterial regulatory proteins, gntR family CMS_RS12490 PF00356 Bacterial regulatory proteins, lacI family CMS_RS12490 PF13377 Periplasmic binding protein-like domain CMS_RS12495 PF00248 Aldo/keto reductase family CMS_RS12495 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS12500 PF12802 MarR family CMS_RS12520 PF00581 Rhodanese-like domain CMS_RS12520 PF00899 ThiF family CMS_RS12530 PF00561 alpha/beta hydrolase fold CMS_RS12535 PF11706 CGNR zinc finger CMS_RS12545 PF00665 Integrase core domain CMS_RS12545 PF13011 CMS_RS12545 CMS_RS12550 PF12802 MarR family CMS_RS12555 PF00486 Transcriptional regulatory protein, C terminal CMS_RS12560 PF14681 Uracil phosphoribosyltransferase CMS_RS12565 PF14437 CMS_RS12565 CMS_RS12575 PF01545 Cation efflux family CMS_RS12580 PF03807 NADP oxidoreductase coenzyme F420-dependent CMS_RS12580 PF14748 Pyrroline-5-carboxylate reductase dimerisation CMS_RS12585 PF02080 TrkA-C domain CMS_RS12585 PF02254 TrkA-N domain CMS_RS12590 PF02386 Cation transport protein CMS_RS12595 PF12840 Helix-turn-helix domain CMS_RS12600 PF12728 Helix-turn-helix domain CMS_RS12605 PF12710 haloacid dehalogenase-like hydrolase CMS_RS12610 PF05768 Glutaredoxin-like domain (DUF836) CMS_RS12615 PF07876 Stress responsive A/B Barrel Domain CMS_RS12620 PF00005 ABC transporter CMS_RS12640 PF03816 Cell envelope-related transcriptional attenuator domain CMS_RS12645 PF00152 tRNA synthetases class II (D, K and N) CMS_RS12645 PF01336 OB-fold nucleic acid binding domain CMS_RS12650 PF03746 LamB/YcsF family CMS_RS12655 PF02682 Allophanate hydrolase subunit 1 CMS_RS12660 PF02626 Allophanate hydrolase subunit 2 CMS_RS12665 PF10708 CMS_RS12665 CMS_RS12670 PF00005 ABC transporter CMS_RS12680 PF02449 Beta-galactosidase CMS_RS12680 PF08532 Beta-galactosidase trimerisation domain CMS_RS12680 PF08533 Beta-galactosidase C-terminal domain CMS_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS12700 PF00356 Bacterial regulatory proteins, lacI family CMS_RS12700 PF13377 Periplasmic binding protein-like domain CMS_RS12705 PF00140 Sigma-70 factor, region 1 CMS_RS12705 PF04539 Sigma-70 region 3 CMS_RS12705 PF04542 Sigma-70 region 2 CMS_RS12705 PF04545 Sigma-70, region 4 CMS_RS12710 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS12715 PF00578 AhpC/TSA family CMS_RS12720 PF02683 CMS_RS12720 CMS_RS12725 PF05140 CMS_RS12725 CMS_RS12730 PF01578 CMS_RS12730 CMS_RS12735 PF13378 Enolase C-terminal domain-like CMS_RS12740 PF00378 Enoyl-CoA hydratase/isomerase family CMS_RS12745 PF00501 AMP-binding enzyme CMS_RS12750 PF05532 CsbD-like CMS_RS12765 PF00005 ABC transporter CMS_RS12765 PF00664 ABC transporter transmembrane region CMS_RS12770 PF00005 ABC transporter CMS_RS12770 PF00664 ABC transporter transmembrane region CMS_RS12775 PF02274 Amidinotransferase CMS_RS12795 PF01808 AICARFT/IMPCHase bienzyme CMS_RS12795 PF02142 MGS-like domain CMS_RS12800 PF00551 Formyl transferase CMS_RS12810 PF00549 CoA-ligase CMS_RS12810 PF02629 CoA binding domain CMS_RS12815 PF00549 CoA-ligase CMS_RS12815 PF08442 ATP-grasp domain CMS_RS12820 PF09995 CMS_RS12820 CMS_RS12835 PF00580 UvrD/REP helicase N-terminal domain CMS_RS12835 PF13361 UvrD-like helicase C-terminal domain CMS_RS12855 PF01040 UbiA prenyltransferase family CMS_RS12870 PF00494 Squalene/phytoene synthase CMS_RS12870 PF01593 Flavin containing amine oxidoreductase CMS_RS12875 PF00348 Polyprenyl synthetase CMS_RS12880 PF00293 NUDIX domain CMS_RS12885 PF00665 Integrase core domain CMS_RS12885 PF13936 Helix-turn-helix domain CMS_RS12890 PF00128 Alpha amylase, catalytic domain CMS_RS12895 PF00248 Aldo/keto reductase family CMS_RS12920 PF13452 N-terminal half of MaoC dehydratase CMS_RS12925 PF01575 MaoC like domain CMS_RS12930 PF01565 FAD binding domain CMS_RS12930 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CMS_RS12935 PF00155 Aminotransferase class I and II CMS_RS12945 PF00584 SecE/Sec61-gamma subunits of protein translocation complex CMS_RS12950 PF02357 Transcription termination factor nusG CMS_RS12955 PF00298 Ribosomal protein L11, RNA binding domain CMS_RS12955 PF03946 Ribosomal protein L11, N-terminal domain CMS_RS12960 PF00687 Ribosomal protein L1p/L10e family CMS_RS12965 PF00583 Acetyltransferase (GNAT) family CMS_RS12970 PF08240 Alcohol dehydrogenase GroES-like domain CMS_RS12970 PF13602 Zinc-binding dehydrogenase CMS_RS12980 PF00665 Integrase core domain CMS_RS12980 PF13011 CMS_RS12980 CMS_RS12985 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS12985 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CMS_RS12990 PF06283 Trehalose utilisation CMS_RS12995 PF01261 Xylose isomerase-like TIM barrel CMS_RS13020 PF04226 CMS_RS13020 CMS_RS13025 PF00072 Response regulator receiver domain CMS_RS13025 PF00196 Bacterial regulatory proteins, luxR family CMS_RS13035 PF02661 Fic/DOC family CMS_RS13045 PF02016 LD-carboxypeptidase CMS_RS13055 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CMS_RS13060 PF09335 CMS_RS13060 CMS_RS13080 PF01047 MarR family CMS_RS13090 PF03372 Endonuclease/Exonuclease/phosphatase family CMS_RS13100 PF13304 AAA domain CMS_RS13105 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CMS_RS13105 PF13242 HAD-hyrolase-like CMS_RS13115 PF00534 Glycosyl transferases group 1 CMS_RS13115 PF13439 Glycosyltransferase Family 4 CMS_RS13115 PF13580 SIS domain CMS_RS13120 PF00294 pfkB family carbohydrate kinase CMS_RS13120 PF01467 Cytidylyltransferase CMS_RS13125 PF00106 short chain dehydrogenase CMS_RS13150 PF06259 Alpha/beta hydrolase CMS_RS13155 PF01075 Glycosyltransferase family 9 (heptosyltransferase) CMS_RS13160 PF00356 Bacterial regulatory proteins, lacI family CMS_RS13160 PF13377 Periplasmic binding protein-like domain CMS_RS13165 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS13170 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS13175 PF01547 Bacterial extracellular solute-binding protein CMS_RS13180 PF01301 Glycosyl hydrolases family 35 CMS_RS13185 PF06250 CMS_RS13185 CMS_RS13190 PF00171 Aldehyde dehydrogenase family CMS_RS13200 PF11387 CMS_RS13200 CMS_RS13215 PF09860 CMS_RS13215 CMS_RS13220 PF06414 Zeta toxin CMS_RS13230 PF06414 Zeta toxin CMS_RS13240 PF12728 Helix-turn-helix domain CMS_RS13245 PF01551 Peptidase family M23 CMS_RS13255 PF13614 AAA domain CMS_RS13290 PF02534 Type IV secretory system Conjugative DNA transfer CMS_RS13290 PF12696 TraM recognition site of TraD and TraG CMS_RS13295 PF16259 CMS_RS13295 CMS_RS13305 PF01590 GAF domain CMS_RS13305 PF07228 Stage II sporulation protein E (SpoIIE) CMS_RS13310 PF07228 Stage II sporulation protein E (SpoIIE) CMS_RS13315 PF13581 Histidine kinase-like ATPase domain CMS_RS13320 PF13466 STAS domain CMS_RS13330 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS13340 PF00881 Nitroreductase family CMS_RS13360 PF13508 Acetyltransferase (GNAT) domain CMS_RS13365 PF11999 Protein of unknown function (DUF3494) CMS_RS13370 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS13375 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS13380 PF07804 HipA-like C-terminal domain CMS_RS13385 PF13560 Helix-turn-helix domain CMS_RS13390 PF00893 Small Multidrug Resistance protein CMS_RS13395 PF13416 Bacterial extracellular solute-binding protein CMS_RS13400 PF07859 alpha/beta hydrolase fold CMS_RS13405 PF03320 Bacterial fructose-1,6-bisphosphatase, glpX-encoded CMS_RS13410 PF01594 CMS_RS13410 CMS_RS13420 PF00665 Integrase core domain CMS_RS13420 PF13011 CMS_RS13420 CMS_RS13425 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS13430 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS13435 PF12849 PBP superfamily domain CMS_RS13440 PF00293 NUDIX domain CMS_RS13440 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS13445 PF02503 Polyphosphate kinase middle domain CMS_RS13445 PF13089 Polyphosphate kinase N-terminal domain CMS_RS13445 PF13090 Polyphosphate kinase C-terminal domain CMS_RS13450 PF00583 Acetyltransferase (GNAT) family CMS_RS13455 PF00486 Transcriptional regulatory protein, C terminal CMS_RS13470 PF08768 Domain of unknown function (DUF1794) CMS_RS13475 PF01571 Aminomethyltransferase folate-binding domain CMS_RS13475 PF08669 Glycine cleavage T-protein C-terminal barrel domain CMS_RS13485 PF10462 Peptidase M66 CMS_RS13490 PF13649 Methyltransferase domain CMS_RS13495 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS13500 PF01895 PhoU domain CMS_RS13505 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS13505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS13510 PF00072 Response regulator receiver domain CMS_RS13510 PF00486 Transcriptional regulatory protein, C terminal CMS_RS13520 PF02559 CarD-like/TRCF domain CMS_RS13525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CMS_RS13525 PF02542 YgbB family CMS_RS13530 PF01406 tRNA synthetases class I (C) catalytic domain CMS_RS13530 PF09190 DALR domain CMS_RS13535 PF00588 SpoU rRNA Methylase family CMS_RS13535 PF08032 RNA 2'-O ribose methyltransferase substrate binding CMS_RS13540 PF06293 Lipopolysaccharide kinase (Kdo/WaaP) family CMS_RS13540 PF13224 CMS_RS13540 CMS_RS13545 PF00005 ABC transporter CMS_RS13545 PF03459 TOBE domain CMS_RS13550 PF13462 Thioredoxin CMS_RS13560 PF00881 Nitroreductase family CMS_RS13565 PF01641 SelR domain CMS_RS13570 PF11662 CMS_RS13570 CMS_RS13575 PF13399 LytR cell envelope-related transcriptional attenuator CMS_RS13580 PF00313 'Cold-shock' DNA-binding domain CMS_RS13585 PF00118 TCP-1/cpn60 chaperonin family CMS_RS13590 PF06013 Proteins of 100 residues with WXG CMS_RS13595 PF00512 His Kinase A (phospho-acceptor) domain CMS_RS13595 PF00672 HAMP domain CMS_RS13595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CMS_RS13600 PF00072 Response regulator receiver domain CMS_RS13600 PF00486 Transcriptional regulatory protein, C terminal CMS_RS13605 PF04851 Type III restriction enzyme, res subunit CMS_RS13605 PF13625 CMS_RS13605 CMS_RS13605 PF16203 CMS_RS13605 CMS_RS13610 PF13625 CMS_RS13610 CMS_RS13620 PF00313 'Cold-shock' DNA-binding domain CMS_RS13625 PF11228 CMS_RS13625 CMS_RS13630 PF00266 Aminotransferase class-V CMS_RS13635 PF01325 Iron dependent repressor, N-terminal DNA binding domain CMS_RS13635 PF02742 Iron dependent repressor, metal binding and dimerisation domain CMS_RS13640 PF00877 NlpC/P60 family CMS_RS13645 PF14279 CMS_RS13645 CMS_RS13650 PF00326 Prolyl oligopeptidase family CMS_RS13650 PF02897 Prolyl oligopeptidase, N-terminal beta-propeller domain CMS_RS13655 PF03704 Bacterial transcriptional activator domain CMS_RS13665 PF11774 Lsr2 CMS_RS13670 PF01300 Telomere recombination CMS_RS13675 PF01968 Hydantoinase/oxoprolinase CMS_RS13675 PF05378 CMS_RS13675 CMS_RS13680 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CMS_RS13705 PF09848 Uncharacterized conserved protein (DUF2075) CMS_RS13710 PF12643 CMS_RS13710 CMS_RS13715 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) CMS_RS13720 PF10412 Type IV secretion-system coupling protein DNA-binding domain CMS_RS13755 PF01934 Protein of unknown function DUF86 CMS_RS13760 PF01381 Helix-turn-helix CMS_RS13760 PF01909 Nucleotidyltransferase domain CMS_RS13790 PF13385 Concanavalin A-like lectin/glucanases superfamily CMS_RS13795 PF12680 SnoaL-like domain CMS_RS13805 PF12389 CMS_RS13805 CMS_RS13810 PF00717 Peptidase S24-like CMS_RS13820 PF12389 CMS_RS13820 CMS_RS13830 PF00012 Hsp70 protein CMS_RS13835 PF01025 GrpE CMS_RS13840 PF00226 DnaJ domain CMS_RS13840 PF01556 DnaJ C terminal domain CMS_RS13845 PF13411 MerR HTH family regulatory protein CMS_RS13850 PF05175 Methyltransferase small domain CMS_RS13865 PF01433 Peptidase family M1 CMS_RS13870 PF13191 AAA ATPase domain CMS_RS13885 PF00583 Acetyltransferase (GNAT) family CMS_RS13890 PF00171 Aldehyde dehydrogenase family CMS_RS13890 PF01619 Proline dehydrogenase CMS_RS13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS13895 PF03466 LysR substrate binding domain CMS_RS13900 PF04234 CopC domain CMS_RS13905 PF07987 Domain of unkown function (DUF1775) CMS_RS13915 PF02435 Levansucrase/Invertase CMS_RS13920 PF00251 Glycosyl hydrolases family 32 N-terminal domain CMS_RS13920 PF08244 Glycosyl hydrolases family 32 C terminal CMS_RS13925 PF01047 MarR family CMS_RS13930 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS13935 PF01263 Aldose 1-epimerase CMS_RS13940 PF13462 Thioredoxin CMS_RS13950 PF13191 AAA ATPase domain CMS_RS13960 PF00365 Phosphofructokinase CMS_RS13965 PF00107 Zinc-binding dehydrogenase CMS_RS13970 PF06993 CMS_RS13970 CMS_RS13975 PF01126 Heme oxygenase CMS_RS13980 PF01223 DNA/RNA non-specific endonuclease CMS_RS13990 PF00202 Aminotransferase class-III CMS_RS13995 PF00490 Delta-aminolevulinic acid dehydratase CMS_RS14000 PF02602 Uroporphyrinogen-III synthase HemD CMS_RS14005 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CMS_RS14005 PF03900 Porphobilinogen deaminase, C-terminal domain CMS_RS14010 PF00762 Ferrochelatase CMS_RS14015 PF06778 Chlorite dismutase CMS_RS14020 PF11716 Mycothiol maleylpyruvate isomerase N-terminal domain CMS_RS14030 PF12277 CMS_RS14030 CMS_RS14035 PF07332 CMS_RS14035 CMS_RS14045 PF01593 Flavin containing amine oxidoreductase CMS_RS14050 PF01208 Uroporphyrinogen decarboxylase (URO-D) CMS_RS14055 PF00745 Glutamyl-tRNAGlu reductase, dimerisation domain CMS_RS14055 PF01488 Shikimate / quinate 5-dehydrogenase CMS_RS14055 PF05201 Glutamyl-tRNAGlu reductase, N-terminal domain CMS_RS14060 PF13302 Acetyltransferase (GNAT) domain CMS_RS14065 PF13302 Acetyltransferase (GNAT) domain CMS_RS14075 PF00665 Integrase core domain CMS_RS14075 PF13011 CMS_RS14075 CMS_RS14080 PF00962 Adenosine/AMP deaminase CMS_RS14085 PF01156 Inosine-uridine preferring nucleoside hydrolase CMS_RS14090 PF00591 Glycosyl transferase family, a/b domain CMS_RS14090 PF02885 Glycosyl transferase family, helical bundle domain CMS_RS14090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CMS_RS14095 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CMS_RS14100 PF02653 CMS_RS14100 CMS_RS14105 PF02653 CMS_RS14105 CMS_RS14110 PF00005 ABC transporter CMS_RS14115 PF02608 Basic membrane protein CMS_RS14120 PF02608 Basic membrane protein CMS_RS14125 PF00483 Nucleotidyl transferase CMS_RS14125 PF01050 Mannose-6-phosphate isomerase CMS_RS14130 PF00534 Glycosyl transferases group 1 CMS_RS14130 PF13439 Glycosyltransferase Family 4 CMS_RS14135 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CMS_RS14140 PF01127 Succinate dehydrogenase/Fumarate reductase transmembrane subunit CMS_RS14145 PF00890 FAD binding domain CMS_RS14145 PF02910 Fumarate reductase flavoprotein C-term CMS_RS14150 PF13085 2Fe-2S iron-sulfur cluster binding domain CMS_RS14150 PF13183 4Fe-4S dicluster domain CMS_RS14155 PF00391 PEP-utilising enzyme, mobile domain CMS_RS14155 PF02896 PEP-utilising enzyme, TIM barrel domain CMS_RS14155 PF05524 PEP-utilising enzyme, N-terminal CMS_RS14160 PF03631 CMS_RS14160 CMS_RS14165 PF03372 Endonuclease/Exonuclease/phosphatase family CMS_RS14170 PF00579 tRNA synthetases class I (W and Y) CMS_RS14175 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS14185 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CMS_RS14185 PF01872 RibD C-terminal domain CMS_RS14190 PF00677 Lumazine binding domain CMS_RS14195 PF00925 GTP cyclohydrolase II CMS_RS14195 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CMS_RS14200 PF00885 6,7-dimethyl-8-ribityllumazine synthase CMS_RS14205 PF00005 ABC transporter CMS_RS14210 PF00005 ABC transporter CMS_RS14215 PF07690 Major Facilitator Superfamily CMS_RS14220 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CMS_RS14225 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS14230 PF00665 Integrase core domain CMS_RS14230 PF13011 CMS_RS14230 CMS_RS14235 PF03547 CMS_RS14235 CMS_RS14240 PF00328 Histidine phosphatase superfamily (branch 2) CMS_RS14250 PF07804 HipA-like C-terminal domain CMS_RS14250 PF13657 HipA N-terminal domain CMS_RS14260 PF08327 Activator of Hsp90 ATPase homolog 1-like protein CMS_RS14265 PF07690 Major Facilitator Superfamily CMS_RS14270 PF00440 Bacterial regulatory proteins, tetR family CMS_RS14275 PF11829 Protein of unknown function (DUF3349) CMS_RS14285 PF01384 CMS_RS14285 CMS_RS14290 PF13302 Acetyltransferase (GNAT) domain CMS_RS14300 PF00106 short chain dehydrogenase CMS_RS14315 PF08922 Domain of unknown function (DUF1905) CMS_RS14320 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CMS_RS14325 PF00665 Integrase core domain CMS_RS14325 PF13011 CMS_RS14325 CMS_RS14330 PF07690 Major Facilitator Superfamily CMS_RS14340 PF13649 Methyltransferase domain CMS_RS14360 PF13620 Carboxypeptidase regulatory-like domain CMS_RS14365 PF13620 Carboxypeptidase regulatory-like domain CMS_RS14370 PF13620 Carboxypeptidase regulatory-like domain CMS_RS14375 PF13620 Carboxypeptidase regulatory-like domain CMS_RS14385 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase CMS_RS14385 PF09363 XFP C-terminal domain CMS_RS14385 PF09364 XFP N-terminal domain CMS_RS14395 PF00665 Integrase core domain CMS_RS14395 PF13936 Helix-turn-helix domain CMS_RS14400 PF01734 Patatin-like phospholipase CMS_RS14405 PF01047 MarR family CMS_RS14410 PF03176 MMPL family CMS_RS14420 PF00857 Isochorismatase family CMS_RS14430 PF01262 Alanine dehydrogenase/PNT, C-terminal domain CMS_RS14430 PF05222 Alanine dehydrogenase/PNT, N-terminal domain CMS_RS14435 PF01037 AsnC family CMS_RS14435 PF13404 AsnC-type helix-turn-helix domain CMS_RS14440 PF00665 Integrase core domain CMS_RS14440 PF13011 CMS_RS14440 CMS_RS14445 PF13302 Acetyltransferase (GNAT) domain CMS_RS14455 PF12833 Helix-turn-helix domain CMS_RS14455 PF12852 Cupin CMS_RS14460 PF00106 short chain dehydrogenase CMS_RS14470 PF04266 ASCH domain CMS_RS14475 PF04191 Phospholipid methyltransferase CMS_RS14480 PF00248 Aldo/keto reductase family CMS_RS14485 PF01554 MatE CMS_RS14515 PF12802 MarR family CMS_RS14535 PF05787 Bacterial protein of unknown function (DUF839) CMS_RS14540 PF13561 Enoyl-(Acyl carrier protein) reductase CMS_RS14545 PF03992 Antibiotic biosynthesis monooxygenase CMS_RS14550 PF00005 ABC transporter CMS_RS14555 PF02653 CMS_RS14555 CMS_RS14560 PF13407 Periplasmic binding protein domain CMS_RS14565 PF00356 Bacterial regulatory proteins, lacI family CMS_RS14565 PF13377 Periplasmic binding protein-like domain CMS_RS14570 PF00294 pfkB family carbohydrate kinase CMS_RS14585 PF13460 NADH(P)-binding CMS_RS14590 PF02656 CMS_RS14590 CMS_RS14600 PF00892 EamA-like transporter family CMS_RS14605 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CMS_RS14605 PF03466 LysR substrate binding domain CMS_RS14610 PF02517 CAAX protease self-immunity CMS_RS14620 PF02517 CAAX protease self-immunity CMS_RS14625 PF00881 Nitroreductase family CMS_RS14630 PF02624 YcaO-like family CMS_RS14645 PF01061 CMS_RS14645 CMS_RS14650 PF00005 ABC transporter CMS_RS14655 PF00248 Aldo/keto reductase family CMS_RS14660 PF07690 Major Facilitator Superfamily CMS_RS14665 PF01638 HxlR-like helix-turn-helix CMS_RS14670 PF05368 NmrA-like family CMS_RS14675 PF02574 Homocysteine S-methyltransferase CMS_RS14680 PF12802 MarR family CMS_RS14685 PF13419 Haloacid dehalogenase-like hydrolase CMS_RS14700 PF11774 Lsr2 CMS_RS14705 PF12728 Helix-turn-helix domain CMS_RS14715 PF07411 Domain of unknown function (DUF1508) CMS_RS14730 PF00239 Resolvase, N terminal domain CMS_RS14730 PF02796 Helix-turn-helix domain of resolvase CMS_RS14750 PF00392 Bacterial regulatory proteins, gntR family CMS_RS14750 PF07729 FCD domain CMS_RS14755 PF02133 Permease for cytosine/purines, uracil, thiamine, allantoin CMS_RS14760 PF00857 Isochorismatase family CMS_RS14770 PF00860 Permease family CMS_RS14775 PF00665 Integrase core domain CMS_RS14775 PF13011 CMS_RS14775 CMS_RS14780 PF00665 Integrase core domain CMS_RS14780 PF13011 CMS_RS14780 CMS_RS14795 PF00459 Inositol monophosphatase family CMS_RS14800 PF06912 CMS_RS14800 CMS_RS14805 PF00248 Aldo/keto reductase family CMS_RS14815 PF04461 Protein of unknown function (DUF520) CMS_RS14820 PF13091 PLD-like domain CMS_RS14820 PF13396 CMS_RS14820 CMS_RS14825 PF01047 MarR family CMS_RS14835 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS14840 PF00348 Polyprenyl synthetase CMS_RS14845 PF01209 ubiE/COQ5 methyltransferase family CMS_RS14850 PF00425 chorismate binding enzyme CMS_RS14855 PF07690 Major Facilitator Superfamily CMS_RS14860 PF12840 Helix-turn-helix domain CMS_RS14865 PF13350 Tyrosine phosphatase family CMS_RS14870 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CMS_RS14875 PF13396 CMS_RS14875 CMS_RS14880 PF14012 CMS_RS14880 CMS_RS14890 PF01040 UbiA prenyltransferase family CMS_RS14895 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS14900 PF13354 Beta-lactamase enzyme family CMS_RS14905 PF01431 Peptidase family M13 CMS_RS14905 PF05649 Peptidase family M13 CMS_RS14910 PF00665 Integrase core domain CMS_RS14910 PF13011 CMS_RS14910 CMS_RS14925 PF00692 dUTPase CMS_RS14945 PF02447 CMS_RS14945 CMS_RS14955 PF00356 Bacterial regulatory proteins, lacI family CMS_RS14955 PF13377 Periplasmic binding protein-like domain CMS_RS14960 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS14965 PF00528 Binding-protein-dependent transport system inner membrane component CMS_RS14970 PF13416 Bacterial extracellular solute-binding protein CMS_RS14975 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS14975 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CMS_RS14980 PF03358 NADPH-dependent FMN reductase CMS_RS15000 PF05067 Manganese containing catalase CMS_RS15005 PF00753 Metallo-beta-lactamase superfamily CMS_RS15010 PF00300 Histidine phosphatase superfamily (branch 1) CMS_RS15015 PF01256 Carbohydrate kinase CMS_RS15030 PF01791 DeoC/LacD family aldolase CMS_RS15035 PF02127 Aminopeptidase I zinc metalloprotease (M18) CMS_RS15040 PF03713 Domain of unknown function (DUF305) CMS_RS15045 PF01738 Dienelactone hydrolase family CMS_RS15050 PF14325 CMS_RS15050 CMS_RS15060 PF05970 CMS_RS15060 CMS_RS15070 PF06983 3-demethylubiquinone-9 3-methyltransferase CMS_RS15075 PF00005 ABC transporter CMS_RS15080 PF01032 FecCD transport family CMS_RS15085 PF01032 FecCD transport family CMS_RS15090 PF01497 Periplasmic binding protein CMS_RS15095 PF06197 CMS_RS15095 CMS_RS15100 PF05425 CMS_RS15100 CMS_RS15100 PF09678 CMS_RS15100 CMS_RS15105 PF00216 Bacterial DNA-binding protein CMS_RS15110 PF00253 Ribosomal protein S14p/S29e CMS_RS15115 PF00471 Ribosomal protein L33 CMS_RS15120 PF00830 Ribosomal L28 family CMS_RS15125 PF01475 Ferric uptake regulator family CMS_RS15130 PF00950 CMS_RS15130 CMS_RS15140 PF01297 Periplasmic solute binding protein family CMS_RS15145 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CMS_RS15145 PF00364 Biotin-requiring enzyme CMS_RS15145 PF02817 e3 binding domain CMS_RS15150 PF02779 Transketolase, pyrimidine binding domain CMS_RS15150 PF02780 Transketolase, C-terminal domain CMS_RS15155 PF00676 Dehydrogenase E1 component CMS_RS15160 PF00155 Aminotransferase class I and II CMS_RS15165 PF04020 CMS_RS15165 CMS_RS15180 PF01451 Low molecular weight phosphotyrosine protein phosphatase CMS_RS15185 PF00206 Lyase CMS_RS15185 PF08328 Adenylosuccinate lyase C-terminal CMS_RS15205 PF00480 ROK family CMS_RS15210 PF02595 Glycerate kinase family CMS_RS15215 PF00534 Glycosyl transferases group 1 CMS_RS15215 PF13439 Glycosyltransferase Family 4 CMS_RS15220 PF13411 MerR HTH family regulatory protein CMS_RS15225 PF00009 Elongation factor Tu GTP binding domain CMS_RS15225 PF03144 Elongation factor Tu domain 2 CMS_RS15225 PF16658 CMS_RS15225 CMS_RS15230 PF05495 CHY zinc finger CMS_RS15235 PF00772 DnaB-like helicase N terminal domain CMS_RS15235 PF03796 DnaB-like helicase C terminal domain CMS_RS15240 PF01281 Ribosomal protein L9, N-terminal domain CMS_RS15240 PF03948 Ribosomal protein L9, C-terminal domain CMS_RS15245 PF01084 Ribosomal protein S18 CMS_RS15250 PF00436 Single-strand binding protein family CMS_RS15255 PF01250 Ribosomal protein S6 CMS_RS15260 PF01743 Poly A polymerase head domain CMS_RS15260 PF01966 HD domain CMS_RS15260 PF12627 Probable RNA and SrmB- binding site of polymerase A CMS_RS15270 PF03023 CMS_RS15270 CMS_RS15275 PF07992 Pyridine nucleotide-disulphide oxidoreductase CMS_RS15280 PF00085 Thioredoxin CMS_RS15285 PF00155 Aminotransferase class I and II CMS_RS15290 PF01820 D-ala D-ala ligase N-terminus CMS_RS15290 PF07478 D-ala D-ala ligase C-terminus CMS_RS15295 PF02195 ParB-like nuclease domain CMS_RS15300 PF13614 AAA domain CMS_RS15305 PF02527 rRNA small subunit methyltransferase G CMS_RS15310 PF01424 R3H domain CMS_RS15315 PF02096 60Kd inner membrane protein CMS_RS15320 PF01809 CMS_RS15320 CMS_RS15325 PF00825 Ribonuclease P CMS_RS15330 PF00468 Ribosomal protein L34 CMS_RS15350 PF07927 YcfA-like protein CMS_RS15360 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CMS_RS15420 PF07510 CMS_RS15420 CMS_RS15430 PF00665 Integrase core domain CMS_RS15430 PF13011 CMS_RS15430 CMS_RS15475 PF01402 Ribbon-helix-helix protein, copG family CMS_RS15525 PF02195 ParB-like nuclease domain CMS_RS15540 PF08401 CMS_RS15540 CMS_RS15545 PF00436 Single-strand binding protein family CMS_RS15555 PF07510 CMS_RS15555 CMS_RS15570 PF00150 Cellulase (glycosyl hydrolase family 5) CMS_RS15570 PF00553 Cellulose binding domain CMS_RS15570 PF01357 Pollen allergen CMS_RS15570 PF03330 Rare lipoprotein A (RlpA)-like double-psi beta-barrel CMS_RS15585 PF00239 Resolvase, N terminal domain CMS_RS15585 PF02796 Helix-turn-helix domain of resolvase CMS_RS15610 PF02481 DNA recombination-mediator protein A CMS_RS15615 PF12728 Helix-turn-helix domain CMS_RS15620 PF11774 Lsr2 CMS_RS15625 PF07690 Major Facilitator Superfamily CMS_RS15635 PF00005 ABC transporter CMS_RS15640 PF04738 CMS_RS15640 CMS_RS15640 PF14028 CMS_RS15640 CMS_RS15645 PF05147 Lanthionine synthetase C-like protein CMS_RS15680 PF07510 CMS_RS15680 CMS_RS15695 PF00665 Integrase core domain CMS_RS15695 PF13011 CMS_RS15695 CMS_RS15770 PF01935 Domain of unknown function DUF87 CMS_RS15770 PF05872 CMS_RS15770 CMS_RS15805 PF01580 FtsK/SpoIIIE family CMS_RS15815 PF14216 CMS_RS15815 CMS_RS15840 PF07510 CMS_RS15840 CMS_RS15870 PF01478 Type IV leader peptidase family CMS_RS15875 PF01476 LysM domain CMS_RS15915 PF00482 Type II secretion system (T2SS), protein F CMS_RS15920 PF00437 Type II/IV secretion system protein CMS_RS15930 PF08666 SAF domain CMS_RS15935 PF12840 Helix-turn-helix domain CMS_RS15950 PF12642 Conjugative transposon protein TcpC CMS_RS15965 PF12846 AAA-like domain CMS_RS16010 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CMS_RS16030 PF13328 HD domain CMS_RS16035 PF04607 Region found in RelA / SpoT proteins CMS_RS16120 PF01551 Peptidase family M23 CMS_RS16130 PF01636 Phosphotransferase enzyme family CMS_RS16145 PF13472 GDSL-like Lipase/Acylhydrolase family CMS_RS16150 PF01551 Peptidase family M23 CMS_RS16160 PF00583 Acetyltransferase (GNAT) family CMS_RS16165 PF01381 Helix-turn-helix CMS_RS16180 PF00106 short chain dehydrogenase CMS_RS16185 PF13930 DNA/RNA non-specific endonuclease CMS_RS16195 PF04536 TLP18 CMS_RS16220 PF00665 Integrase core domain CMS_RS16220 PF13011 CMS_RS16220 CMS_RS16225 PF11298 CMS_RS16225 CMS_RS16240 PF12710 haloacid dehalogenase-like hydrolase CMS_RS16245 PF01202 Shikimate kinase CMS_RS16245 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CMS_RS16245 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CMS_RS16255 PF02517 CAAX protease self-immunity CMS_RS16260 PF02661 Fic/DOC family CMS_RS16265 PF10544 CMS_RS16265 CMS_RS16265 PF10708 CMS_RS16265 CMS_RS16265 PF13250 CMS_RS16265 CMS_RS16280 PF13560 Helix-turn-helix domain CMS_RS16295 PF08242 Methyltransferase domain CMS_RS16335 PF01381 Helix-turn-helix CMS_RS16345 PF01936 NYN domain CMS_RS16350 PF00145 C-5 cytosine-specific DNA methylase CMS_RS16360 PF00877 NlpC/P60 family CMS_RS16365 PF00665 Integrase core domain CMS_RS16365 PF13011 CMS_RS16365 CMS_RS16370 PF00665 Integrase core domain CMS_RS16370 PF13011 CMS_RS16370 CMS_RS16380 PF00665 Integrase core domain CMS_RS16380 PF13011 CMS_RS16380 CMS_RS16385 PF09723 CMS_RS16385 CMS_RS16395 PF01381 Helix-turn-helix CMS_RS16400 PF00665 Integrase core domain CMS_RS16400 PF13011 CMS_RS16400 CMS_RS16410 PF14029 CMS_RS16410 CMS_RS16415 PF00665 Integrase core domain CMS_RS16415 PF13011 CMS_RS16415 CMS_RS16420 PF10783 CMS_RS16420 CMS_RS16430 PF00665 Integrase core domain CMS_RS16430 PF13011 CMS_RS16430 CMS_RS16440 PF08808 CMS_RS16440 CMS_RS16450 PF00665 Integrase core domain CMS_RS16450 PF13011 CMS_RS16450 CMS_RS16455 PF00665 Integrase core domain CMS_RS16455 PF13011 CMS_RS16455 CMS_RS16460 PF00665 Integrase core domain CMS_RS16460 PF13011 CMS_RS16460 CMS_RS16465 PF00665 Integrase core domain CMS_RS16465 PF13011 CMS_RS16465 CMS_RS16470 PF05901 CMS_RS16470 CMS_RS16475 PF00248 Aldo/keto reductase family CMS_RS16480 PF00665 Integrase core domain CMS_RS16480 PF13011 CMS_RS16480 CMS_RS16485 PF00665 Integrase core domain CMS_RS16485 PF13011 CMS_RS16485 CMS_RS16505 PF14350 CMS_RS16505 CMS_RS16510 PF13031 CMS_RS16510 CMS_RS16515 PF00665 Integrase core domain CMS_RS16515 PF13011 CMS_RS16515 CMS_RS16540 PF13289 CMS_RS16540 CMS_RS16545 PF00665 Integrase core domain CMS_RS16545 PF13011 CMS_RS16545 CMS_RS16550 PF00665 Integrase core domain CMS_RS16550 PF13011 CMS_RS16550 CMS_RS16555 PF00665 Integrase core domain CMS_RS16555 PF13011 CMS_RS16555 CMS_RS16560 PF02517 CAAX protease self-immunity CMS_RS16565 PF00665 Integrase core domain CMS_RS16565 PF13011 CMS_RS16565 CMS_RS16575 PF00665 Integrase core domain CMS_RS16575 PF13011 CMS_RS16575 CMS_RS16580 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CMS_RS16580 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CMS_RS16585 PF00665 Integrase core domain CMS_RS16585 PF13011 CMS_RS16585 CMS_RS16610 PF15526 Putative toxin 46 CMS_RS16615 PF13671 AAA domain CMS_RS16620 PF11314 CMS_RS16620 CMS_RS16625 PF00665 Integrase core domain CMS_RS16625 PF13011 CMS_RS16625 CMS_RS16630 PF13365 Trypsin-like peptidase domain CMS_RS16635 PF00665 Integrase core domain CMS_RS16635 PF13011 CMS_RS16635 CMS_RS16640 PF00665 Integrase core domain CMS_RS16640 PF13011 CMS_RS16640 CMS_RS16645 PF00665 Integrase core domain CMS_RS16645 PF13011 CMS_RS16645 CMS_RS16655 PF00665 Integrase core domain CMS_RS16655 PF13011 CMS_RS16655 CMS_RS16660 PF00356 Bacterial regulatory proteins, lacI family CMS_RS16665 PF11457 CMS_RS16665 CMS_RS16670 PF00665 Integrase core domain CMS_RS16670 PF13011 CMS_RS16670 CMS_RS16685 PF00665 Integrase core domain CMS_RS16685 PF13011 CMS_RS16685 CMS_RS16690 PF00665 Integrase core domain CMS_RS16690 PF13011 CMS_RS16690 CMS_RS16695 PF13304 AAA domain CMS_RS16700 PF09683 Bacteriocin (Lactococcin_972) CMS_RS16705 PF13304 AAA domain CMS_RS16710 PF08213 CMS_RS16710 CMS_RS16715 PF00665 Integrase core domain CMS_RS16715 PF13011 CMS_RS16715 CMS_RS16725 PF00665 Integrase core domain CMS_RS16725 PF13011 CMS_RS16725 CMS_RS16730 PF03693 Uncharacterised protein family (UPF0156) CMS_RS16735 PF14280 CMS_RS16735 CMS_RS16745 PF13707 CMS_RS16745 CMS_RS16750 PF01391 Collagen triple helix repeat (20 copies) CMS_RS16770 PF00665 Integrase core domain CMS_RS16770 PF13011 CMS_RS16770 CMS_RS16775 PF00665 Integrase core domain CMS_RS16775 PF13011 CMS_RS16775 CMS_RS16780 PF00665 Integrase core domain CMS_RS16780 PF13011 CMS_RS16780 CMS_RS16790 PF03629 Domain of unknown function (DUF303) CMS_RS16815 PF01381 Helix-turn-helix CMS_RS16830 PF00089 Trypsin CMS_RS16840 PF02086 D12 class N6 adenine-specific DNA methyltransferase CMS_RS16845 PF01555 DNA methylase CMS_RS16850 PF00665 Integrase core domain CMS_RS16850 PF13011 CMS_RS16850 CMS_RS16860 PF00089 Trypsin CMS_RS16875 PF00665 Integrase core domain CMS_RS16875 PF13011 CMS_RS16875 CMS_RS16950 PF00665 Integrase core domain CMS_RS16950 PF13011 CMS_RS16950 CMS_RS16960 PF12686 CMS_RS16960 CMS_RS16975 PF12957 CMS_RS16975 CMS_RS17000 PF13365 Trypsin-like peptidase domain