locus-tag class description DN605_RS00010 PF08299 Bacterial dnaA protein helix-turn-helix DN605_RS00010 PF11638 DnaA N-terminal domain DN605_RS00010 PF00308 Bacterial dnaA protein DN605_RS00015 PF02768 DNA polymerase III beta subunit, C-terminal domain DN605_RS00015 PF02767 DNA polymerase III beta subunit, central domain DN605_RS00015 PF00712 DNA polymerase III beta subunit, N-terminal domain DN605_RS00025 PF02463 RecF/RecN/SMC N terminal domain DN605_RS00040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS00040 PF01751 Toprim domain DN605_RS00040 PF00986 DNA gyrase B subunit, carboxyl terminus DN605_RS00040 PF00204 DNA gyrase B DN605_RS00050 PF00521 DNA gyrase/topoisomerase IV, subunit A DN605_RS00050 PF03989 DNA gyrase C-terminal domain, beta-propeller DN605_RS00060 PF00075 RNase H DN605_RS00070 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN605_RS00070 PF03129 Anticodon binding domain DN605_RS00085 PF00679 Elongation factor G C-terminus DN605_RS00085 PF03144 Elongation factor Tu domain 2 DN605_RS00085 PF00009 Elongation factor Tu GTP binding domain DN605_RS00085 PF14492 Elongation Factor G, domain II DN605_RS00095 PF03551 Transcriptional regulator PadR-like family DN605_RS00110 PF00338 Ribosomal protein S10p/S20e DN605_RS00115 PF00297 Ribosomal protein L3 DN605_RS00120 PF00573 Ribosomal protein L4/L1 family DN605_RS00125 PF00276 Ribosomal protein L23 DN605_RS00130 PF00181 Ribosomal Proteins L2, RNA binding domain DN605_RS00130 PF03947 Ribosomal Proteins L2, C-terminal domain DN605_RS00135 PF00203 Ribosomal protein S19 DN605_RS00140 PF00237 Ribosomal protein L22p/L17e DN605_RS00145 PF00189 Ribosomal protein S3, C-terminal domain DN605_RS00145 PF07650 KH domain DN605_RS00150 PF00252 Ribosomal protein L16p/L10e DN605_RS00155 PF00831 Ribosomal L29 protein DN605_RS00160 PF00366 Ribosomal protein S17 DN605_RS00165 PF00238 Ribosomal protein L14p/L23e DN605_RS00170 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 DN605_RS00170 PF00467 KOW motif DN605_RS00175 PF00673 ribosomal L5P family C-terminus DN605_RS00175 PF00281 Ribosomal protein L5 DN605_RS00180 PF00253 Ribosomal protein S14p/S29e DN605_RS00185 PF00410 Ribosomal protein S8 DN605_RS00190 PF00347 Ribosomal protein L6 DN605_RS00195 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast DN605_RS00200 PF00333 Ribosomal protein S5, N-terminal domain DN605_RS00200 PF03719 Ribosomal protein S5, C-terminal domain DN605_RS00205 PF00327 Ribosomal protein L30p/L7e DN605_RS00210 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A DN605_RS00215 PF00344 SecY translocase DN605_RS00220 PF05191 Adenylate kinase, active site lid DN605_RS00225 PF00557 Metallopeptidase family M24 DN605_RS00235 PF01176 Translation initiation factor 1A / IF-1 DN605_RS00240 PF00444 Ribosomal protein L36 DN605_RS00245 PF00416 Ribosomal protein S13/S18 DN605_RS00250 PF00411 Ribosomal protein S11 DN605_RS00255 PF01479 S4 domain DN605_RS00255 PF00163 Ribosomal protein S4/S9 N-terminal domain DN605_RS00260 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN605_RS00260 PF01000 RNA polymerase Rpb3/RpoA insert domain DN605_RS00260 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN605_RS00265 PF01196 Ribosomal protein L17 DN605_RS00280 PF00005 ABC transporter DN605_RS00285 PF00392 Bacterial regulatory proteins, gntR family DN605_RS00290 PF14748 Pyrroline-5-carboxylate reductase dimerisation DN605_RS00290 PF03807 NADP oxidoreductase coenzyme F420-dependent DN605_RS00295 PF01472 PUA domain DN605_RS00295 PF00696 Amino acid kinase family DN605_RS00300 PF00171 Aldehyde dehydrogenase family DN605_RS00310 PF00132 Bacterial transferase hexapeptide (six repeats) DN605_RS00310 PF00483 Nucleotidyl transferase DN605_RS00315 PF14572 Phosphoribosyl synthetase-associated domain DN605_RS00315 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DN605_RS00320 PF01195 Peptidyl-tRNA hydrolase DN605_RS00325 PF01980 tRNA-methyltransferase O DN605_RS00325 PF18389 TrmO C-terminal domain DN605_RS00335 PF02875 Mur ligase family, glutamate ligase domain DN605_RS00335 PF08245 Mur ligase middle domain DN605_RS00340 PF01177 Asp/Glu/Hydantoin racemase DN605_RS00355 PF00842 Alanine racemase, C-terminal domain DN605_RS00355 PF01168 Alanine racemase, N-terminal domain DN605_RS00360 PF00919 Uncharacterized protein family UPF0004 DN605_RS00360 PF01938 TRAM domain DN605_RS00360 PF04055 Radical SAM superfamily DN605_RS00375 PF05192 MutS domain III DN605_RS00375 PF05188 MutS domain II DN605_RS00375 PF01624 MutS domain I DN605_RS00375 PF05190 MutS family domain IV DN605_RS00375 PF00488 MutS domain V DN605_RS00385 PF01119 DNA mismatch repair protein, C-terminal domain DN605_RS00385 PF08676 MutL C terminal dimerisation domain DN605_RS00395 PF17209 Hfq protein DN605_RS00405 PF01168 Alanine racemase, N-terminal domain DN605_RS00410 PF04472 Cell division protein SepF DN605_RS00425 PF01668 SmpB protein DN605_RS00430 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DN605_RS00440 PF01554 MatE DN605_RS00445 PF00072 Response regulator receiver domain DN605_RS00445 PF00486 Transcriptional regulatory protein, C terminal DN605_RS00450 PF02702 Osmosensitive K+ channel His kinase sensor domain DN605_RS00450 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS00450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS00450 PF13493 Domain of unknown function (DUF4118) DN605_RS00460 PF02254 TrkA-N domain DN605_RS00460 PF02080 TrkA-C domain DN605_RS00465 PF02386 Cation transport protein DN605_RS00475 PF02669 K+-transporting ATPase, c chain DN605_RS00485 PF03814 Potassium-transporting ATPase A subunit DN605_RS00495 PF13493 Domain of unknown function (DUF4118) DN605_RS00495 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS00495 PF02702 Osmosensitive K+ channel His kinase sensor domain DN605_RS00495 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS00500 PF04963 Sigma-54 factor, core binding domain DN605_RS00500 PF04552 Sigma-54, DNA binding domain DN605_RS00500 PF00309 Sigma-54 factor, Activator interacting domain (AID) DN605_RS00510 PF00085 Thioredoxin DN605_RS00515 PF00581 Rhodanese-like domain DN605_RS00535 PF01022 Bacterial regulatory protein, arsR family DN605_RS00540 PF00958 GMP synthase C terminal domain DN605_RS00540 PF02540 NAD synthase DN605_RS00540 PF00117 Glutamine amidotransferase class-I DN605_RS00550 PF00156 Phosphoribosyl transferase domain DN605_RS00555 PF01259 SAICAR synthetase DN605_RS00560 PF13537 Glutamine amidotransferase domain DN605_RS00560 PF00733 Asparagine synthase DN605_RS00565 PF18318 Glutamine synthetase C-terminal domain DN605_RS00565 PF00120 Glutamine synthetase, catalytic domain DN605_RS00565 PF12437 Glutamine synthetase type III N terminal DN605_RS00570 PF03951 Glutamine synthetase, beta-Grasp domain DN605_RS00570 PF00120 Glutamine synthetase, catalytic domain DN605_RS00575 PF03861 ANTAR domain DN605_RS00575 PF00072 Response regulator receiver domain DN605_RS00580 PF00117 Glutamine amidotransferase class-I DN605_RS00580 PF06418 CTP synthase N-terminus DN605_RS00610 PF12631 MnmE helical domain DN605_RS00610 PF10396 GTP-binding protein TrmE N-terminus DN605_RS00610 PF01926 50S ribosome-binding GTPase DN605_RS00630 PF00266 Aminotransferase class-V DN605_RS00635 PF01554 MatE DN605_RS00650 PF00072 Response regulator receiver domain DN605_RS00650 PF08769 Sporulation initiation factor Spo0A C terminal DN605_RS00660 PF08125 Mannitol dehydrogenase C-terminal domain DN605_RS00660 PF01232 Mannitol dehydrogenase Rossmann domain DN605_RS00665 PF03786 D-mannonate dehydratase (UxuA) DN605_RS00670 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DN605_RS00675 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DN605_RS00680 PF03480 Bacterial extracellular solute-binding protein, family 7 DN605_RS00685 PF08240 Alcohol dehydrogenase GroES-like domain DN605_RS00685 PF00107 Zinc-binding dehydrogenase DN605_RS00690 PF07729 FCD domain DN605_RS00690 PF00392 Bacterial regulatory proteins, gntR family DN605_RS00695 PF00535 Glycosyl transferase family 2 DN605_RS00700 PF02915 Rubrerythrin DN605_RS00705 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DN605_RS00705 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DN605_RS00705 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DN605_RS00710 PF00293 NUDIX domain DN605_RS00710 PF09297 NADH pyrophosphatase zinc ribbon domain DN605_RS00745 PF00342 Phosphoglucose isomerase DN605_RS00760 PF00589 Phage integrase family DN605_RS00760 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS00780 PF04851 Type III restriction enzyme, res subunit DN605_RS00780 PF08463 EcoEI R protein C-terminal DN605_RS00780 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DN605_RS00780 PF00271 Helicase conserved C-terminal domain DN605_RS00805 PF12161 HsdM N-terminal domain DN605_RS00805 PF02384 N-6 DNA Methylase DN605_RS00815 PF00665 Integrase core domain DN605_RS00815 PF13333 Integrase core domain DN605_RS00825 PF00535 Glycosyl transferase family 2 DN605_RS00865 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN605_RS00890 PF08671 Anti-repressor SinI DN605_RS00890 PF01381 Helix-turn-helix DN605_RS00935 PF03691 Uncharacterised protein family (UPF0167) DN605_RS00945 PF00501 AMP-binding enzyme DN605_RS00945 PF00550 Phosphopantetheine attachment site DN605_RS00945 PF07993 Male sterility protein DN605_RS00945 PF00668 Condensation domain DN605_RS00945 PF13193 AMP-binding enzyme C-terminal domain DN605_RS01045 PF03432 Relaxase/Mobilisation nuclease domain DN605_RS01090 PF08275 DNA primase catalytic core, N-terminal domain DN605_RS01090 PF01807 CHC2 zinc finger DN605_RS01100 PF01131 DNA topoisomerase DN605_RS01100 PF01751 Toprim domain DN605_RS01170 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS01170 PF03389 MobA/MobL family DN605_RS01170 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS01180 PF14492 Elongation Factor G, domain II DN605_RS01180 PF00009 Elongation factor Tu GTP binding domain DN605_RS01180 PF03764 Elongation factor G, domain IV DN605_RS01180 PF00679 Elongation factor G C-terminus DN605_RS01210 PF10548 P22AR C-terminal domain DN605_RS01210 PF02498 BRO family, N-terminal domain DN605_RS01230 PF17762 HTH domain found in ParB protein DN605_RS01230 PF02195 ParB-like nuclease domain DN605_RS01235 PF13614 AAA domain DN605_RS01245 PF12728 Helix-turn-helix domain DN605_RS01245 PF12727 PBP superfamily domain DN605_RS01265 PF11208 Protein of unknown function (DUF2992) DN605_RS01275 PF01554 MatE DN605_RS01300 PF03432 Relaxase/Mobilisation nuclease domain DN605_RS01335 PF01131 DNA topoisomerase DN605_RS01335 PF01751 Toprim domain DN605_RS01340 PF10711 Hypothetical protein (DUF2513) DN605_RS01360 PF01476 LysM domain DN605_RS01360 PF00877 NlpC/P60 family DN605_RS01365 PF00145 C-5 cytosine-specific DNA methylase DN605_RS01420 PF01807 CHC2 zinc finger DN605_RS01420 PF08275 DNA primase catalytic core, N-terminal domain DN605_RS01425 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS01425 PF03389 MobA/MobL family DN605_RS01425 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS01455 PF01381 Helix-turn-helix DN605_RS01530 PF03575 Peptidase family S51 DN605_RS01535 PF08003 Protein of unknown function (DUF1698) DN605_RS01645 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain DN605_RS01645 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain DN605_RS01645 PF01000 RNA polymerase Rpb3/RpoA insert domain DN605_RS01770 PF03747 ADP-ribosylglycohydrolase DN605_RS01860 PF00239 Resolvase, N terminal domain DN605_RS01860 PF02796 Helix-turn-helix domain of resolvase DN605_RS01925 PF01476 LysM domain DN605_RS01925 PF00877 NlpC/P60 family DN605_RS01945 PF01555 DNA methylase DN605_RS01985 PF17762 HTH domain found in ParB protein DN605_RS01985 PF02195 ParB-like nuclease domain DN605_RS02275 PF00152 tRNA synthetases class II (D, K and N) DN605_RS02275 PF01336 OB-fold nucleic acid binding domain DN605_RS02280 PF04542 Sigma-70 region 2 DN605_RS02280 PF04539 Sigma-70 region 3 DN605_RS02280 PF04545 Sigma-70, region 4 DN605_RS02295 PF00009 Elongation factor Tu GTP binding domain DN605_RS02295 PF03144 Elongation factor Tu domain 2 DN605_RS02295 PF00679 Elongation factor G C-terminus DN605_RS02295 PF06421 GTP-binding protein LepA C-terminus DN605_RS02305 PF01515 Phosphate acetyl/butaryl transferase DN605_RS02315 PF13333 Integrase core domain DN605_RS02315 PF00665 Integrase core domain DN605_RS02315 PF13276 HTH-like domain DN605_RS02320 PF13276 HTH-like domain DN605_RS02320 PF00665 Integrase core domain DN605_RS02320 PF13333 Integrase core domain DN605_RS02325 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS02325 PF17862 AAA+ lid domain DN605_RS02325 PF01434 Peptidase family M41 DN605_RS02325 PF06480 FtsH Extracellular DN605_RS02330 PF02557 D-alanyl-D-alanine carboxypeptidase DN605_RS02335 PF07722 Peptidase C26 DN605_RS02345 PF02311 AraC-like ligand binding domain DN605_RS02345 PF12833 Helix-turn-helix domain DN605_RS02355 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN605_RS02355 PF15714 Stage V sporulation protein T C-terminal, transcription factor DN605_RS02360 PF00849 RNA pseudouridylate synthase DN605_RS02360 PF01479 S4 domain DN605_RS02365 PF01252 Signal peptidase (SPase) II DN605_RS02370 PF04055 Radical SAM superfamily DN605_RS02370 PF06463 Molybdenum Cofactor Synthesis C DN605_RS02375 PF00989 PAS fold DN605_RS02375 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS02375 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS02375 PF16736 Single Cache-like DN605_RS02380 PF00072 Response regulator receiver domain DN605_RS02380 PF00486 Transcriptional regulatory protein, C terminal DN605_RS02395 PF00873 AcrB/AcrD/AcrF family DN605_RS02415 PF01244 Membrane dipeptidase (Peptidase family M19) DN605_RS02445 PF16916 Dimerisation domain of Zinc Transporter DN605_RS02445 PF01545 Cation efflux family DN605_RS02450 PF00072 Response regulator receiver domain DN605_RS02450 PF00486 Transcriptional regulatory protein, C terminal DN605_RS02455 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS02455 PF00672 HAMP domain DN605_RS02455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS02460 PF13180 PDZ domain DN605_RS02465 PF07729 FCD domain DN605_RS02465 PF00392 Bacterial regulatory proteins, gntR family DN605_RS02470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DN605_RS02470 PF00393 6-phosphogluconate dehydrogenase, C-terminal domain DN605_RS02475 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS02475 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS02480 PF08240 Alcohol dehydrogenase GroES-like domain DN605_RS02480 PF00107 Zinc-binding dehydrogenase DN605_RS02495 PF03480 Bacterial extracellular solute-binding protein, family 7 DN605_RS02500 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DN605_RS02500 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DN605_RS02505 PF04290 Tripartite ATP-independent periplasmic transporters, DctQ component DN605_RS02505 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DN605_RS02515 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DN605_RS02515 PF13378 Enolase C-terminal domain-like DN605_RS02520 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DN605_RS02520 PF08666 SAF domain DN605_RS02545 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS02545 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS02550 PF00005 ABC transporter DN605_RS02550 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN605_RS02580 PF01381 Helix-turn-helix DN605_RS02590 PF02080 TrkA-C domain DN605_RS02590 PF02254 TrkA-N domain DN605_RS02595 PF02386 Cation transport protein DN605_RS02600 PF03030 Inorganic H+ pyrophosphatase DN605_RS02605 PF05580 SpoIVB peptidase S55 DN605_RS02605 PF17820 PDZ domain DN605_RS02615 PF02082 Transcriptional regulator DN605_RS02620 PF00395 S-layer homology domain DN605_RS02625 PF02687 FtsX-like permease family DN605_RS02625 PF00005 ABC transporter DN605_RS02625 PF12704 MacB-like periplasmic core domain DN605_RS02630 PF12704 MacB-like periplasmic core domain DN605_RS02630 PF02687 FtsX-like permease family DN605_RS02630 PF00005 ABC transporter DN605_RS02635 PF16576 Barrel-sandwich domain of CusB or HlyD membrane-fusion DN605_RS02650 PF07670 Nucleoside recognition DN605_RS02650 PF17910 FeoB cytosolic helical domain DN605_RS02650 PF02421 Ferrous iron transport protein B DN605_RS02650 PF04023 FeoA domain DN605_RS02650 PF07664 Ferrous iron transport protein B C terminus DN605_RS02660 PF01032 FecCD transport family DN605_RS02665 PF00005 ABC transporter DN605_RS02675 PF01888 CbiD DN605_RS02680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN605_RS02685 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN605_RS02690 PF11760 Cobalamin synthesis G N-terminal DN605_RS02690 PF01890 Cobalamin synthesis G C-terminus DN605_RS02690 PF11761 Cobalamin biosynthesis central region DN605_RS02695 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN605_RS02700 PF02571 Precorrin-6x reductase CbiJ/CobK DN605_RS02705 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN605_RS02710 PF02570 Precorrin-8X methylmutase DN605_RS02720 PF00654 Voltage gated chloride channel DN605_RS02725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS02725 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS02730 PF00072 Response regulator receiver domain DN605_RS02730 PF00486 Transcriptional regulatory protein, C terminal DN605_RS02745 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN605_RS02745 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DN605_RS02755 PF01546 Peptidase family M20/M25/M40 DN605_RS02755 PF07687 Peptidase dimerisation domain DN605_RS02760 PF01380 SIS domain DN605_RS02760 PF01418 Helix-turn-helix domain, rpiR family DN605_RS02765 PF03606 C4-dicarboxylate anaerobic carrier DN605_RS02775 PF01791 DeoC/LacD family aldolase DN605_RS02780 PF02733 Dak1 domain DN605_RS02785 PF02734 DAK2 domain DN605_RS02785 PF02733 Dak1 domain DN605_RS02790 PF04198 Putative sugar-binding domain DN605_RS02815 PF07581 The GLUG motif DN605_RS02815 PF09479 Listeria-Bacteroides repeat domain (List_Bact_rpt) DN605_RS02825 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS02830 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS02835 PF00005 ABC transporter DN605_RS02845 PF00465 Iron-containing alcohol dehydrogenase DN605_RS02850 PF13419 Haloacid dehalogenase-like hydrolase DN605_RS02855 PF00491 Arginase family DN605_RS02860 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN605_RS02860 PF02770 Acyl-CoA dehydrogenase, middle domain DN605_RS02860 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN605_RS02865 PF07670 Nucleoside recognition DN605_RS02870 PF02515 CoA-transferase family III DN605_RS02875 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN605_RS02875 PF02770 Acyl-CoA dehydrogenase, middle domain DN605_RS02875 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN605_RS02880 PF01012 Electron transfer flavoprotein domain DN605_RS02885 PF00766 Electron transfer flavoprotein FAD-binding domain DN605_RS02885 PF01012 Electron transfer flavoprotein domain DN605_RS02895 PF01268 Formate--tetrahydrofolate ligase DN605_RS02900 PF01037 Lrp/AsnC ligand binding domain DN605_RS02905 PF01979 Amidohydrolase family DN605_RS02910 PF01175 Urocanase Rossmann-like domain DN605_RS02910 PF17391 Urocanase N-terminal domain DN605_RS02910 PF17392 Urocanase C-terminal domain DN605_RS02915 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS02915 PF03466 LysR substrate binding domain DN605_RS02920 PF07837 Formiminotransferase domain, N-terminal subdomain DN605_RS02920 PF02971 Formiminotransferase domain DN605_RS02935 PF04961 Formiminotransferase-cyclodeaminase DN605_RS02950 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN605_RS02950 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN605_RS02955 PF08245 Mur ligase middle domain DN605_RS02955 PF02875 Mur ligase family, glutamate ligase domain DN605_RS02960 PF01226 Formate/nitrite transporter DN605_RS02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS02965 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS02970 PF00072 Response regulator receiver domain DN605_RS02970 PF00486 Transcriptional regulatory protein, C terminal DN605_RS02990 PF13396 Phospholipase_D-nuclease N-terminal DN605_RS02990 PF13091 PLD-like domain DN605_RS02995 PF00156 Phosphoribosyl transferase domain DN605_RS03005 PF01381 Helix-turn-helix DN605_RS03015 PF01048 Phosphorylase superfamily DN605_RS03020 PF01979 Amidohydrolase family DN605_RS03030 PF03819 MazG nucleotide pyrophosphohydrolase domain DN605_RS03035 PF00216 Bacterial DNA-binding protein DN605_RS03040 PF01479 S4 domain DN605_RS03045 PF02424 ApbE family DN605_RS03070 PF08279 HTH domain DN605_RS03070 PF02829 3H domain DN605_RS03075 PF01661 Macro domain DN605_RS03085 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN605_RS03085 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN605_RS03100 PF03062 MBOAT, membrane-bound O-acyltransferase family DN605_RS03120 PF02653 Branched-chain amino acid transport system / permease component DN605_RS03125 PF11862 Domain of unknown function (DUF3382) DN605_RS03125 PF02653 Branched-chain amino acid transport system / permease component DN605_RS03130 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN605_RS03130 PF00005 ABC transporter DN605_RS03135 PF00005 ABC transporter DN605_RS03140 PF00155 Aminotransferase class I and II DN605_RS03145 PF00155 Aminotransferase class I and II DN605_RS03150 PF13411 MerR HTH family regulatory protein DN605_RS03150 PF06445 GyrI-like small molecule binding domain DN605_RS03160 PF01207 Dihydrouridine synthase (Dus) DN605_RS03165 PF04542 Sigma-70 region 2 DN605_RS03165 PF08281 Sigma-70, region 4 DN605_RS03175 PF02272 DHHA1 domain DN605_RS03175 PF17768 RecJ OB domain DN605_RS03175 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DN605_RS03175 PF01368 DHH family DN605_RS03180 PF02824 TGS domain DN605_RS03180 PF04607 Region found in RelA / SpoT proteins DN605_RS03180 PF13291 ACT domain DN605_RS03185 PF02580 D-Tyr-tRNA(Tyr) deacylase DN605_RS03190 PF00753 Metallo-beta-lactamase superfamily DN605_RS03195 PF04055 Radical SAM superfamily DN605_RS03200 PF00485 Phosphoribulokinase / Uridine kinase family DN605_RS03205 PF00128 Alpha amylase, catalytic domain DN605_RS03205 PF02903 Alpha amylase, N-terminal ig-like domain DN605_RS03210 PF01966 HD domain DN605_RS03210 PF12072 Domain of unknown function (DUF3552) DN605_RS03210 PF00013 KH domain DN605_RS03235 PF00380 Ribosomal protein S9/S16 DN605_RS03240 PF00572 Ribosomal protein L13 DN605_RS03245 PF01171 PP-loop family DN605_RS03255 PF01037 Lrp/AsnC ligand binding domain DN605_RS03260 PF00155 Aminotransferase class I and II DN605_RS03275 PF00288 GHMP kinases N terminal domain DN605_RS03275 PF08544 GHMP kinases C terminal DN605_RS03280 PF09551 Stage II sporulation protein R (spore_II_R) DN605_RS03285 PF06480 FtsH Extracellular DN605_RS03285 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS03285 PF17862 AAA+ lid domain DN605_RS03285 PF01434 Peptidase family M41 DN605_RS03290 PF00156 Phosphoribosyl transferase domain DN605_RS03295 PF11734 TilS substrate C-terminal domain DN605_RS03295 PF01171 PP-loop family DN605_RS03300 PF00772 DnaB-like helicase N terminal domain DN605_RS03300 PF03796 DnaB-like helicase C terminal domain DN605_RS03305 PF03948 Ribosomal protein L9, C-terminal domain DN605_RS03305 PF01281 Ribosomal protein L9, N-terminal domain DN605_RS03310 PF02272 DHHA1 domain DN605_RS03310 PF01368 DHH family DN605_RS03315 PF01063 Amino-transferase class IV DN605_RS03325 PF00589 Phage integrase family DN605_RS03325 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS03375 PF01546 Peptidase family M20/M25/M40 DN605_RS03410 PF02535 ZIP Zinc transporter DN605_RS03420 PF03466 LysR substrate binding domain DN605_RS03420 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS03425 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN605_RS03430 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS03435 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS03435 PF12911 N-terminal TM domain of oligopeptide transport permease C DN605_RS03440 PF00005 ABC transporter DN605_RS03445 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN605_RS03445 PF00005 ABC transporter DN605_RS03460 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS03460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS03475 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN605_RS03475 PF01872 RibD C-terminal domain DN605_RS03480 PF00677 Lumazine binding domain DN605_RS03485 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DN605_RS03485 PF00925 GTP cyclohydrolase II DN605_RS03490 PF00885 6,7-dimethyl-8-ribityllumazine synthase DN605_RS03505 PF07943 Penicillin-binding protein 5, C-terminal domain DN605_RS03505 PF00768 D-alanyl-D-alanine carboxypeptidase DN605_RS03515 PF00072 Response regulator receiver domain DN605_RS03515 PF00486 Transcriptional regulatory protein, C terminal DN605_RS03520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS03520 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS03520 PF00989 PAS fold DN605_RS03520 PF16736 Single Cache-like DN605_RS03530 PF01053 Cys/Met metabolism PLP-dependent enzyme DN605_RS03540 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain DN605_RS03540 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain DN605_RS03545 PF01842 ACT domain DN605_RS03545 PF10369 Small subunit of acetolactate synthase DN605_RS03550 PF00205 Thiamine pyrophosphate enzyme, central domain DN605_RS03550 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN605_RS03550 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN605_RS03555 PF10369 Small subunit of acetolactate synthase DN605_RS03560 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DN605_RS03560 PF00205 Thiamine pyrophosphate enzyme, central domain DN605_RS03560 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN605_RS03565 PF08546 Ketopantoate reductase PanE/ApbA C terminal DN605_RS03565 PF02558 Ketopantoate reductase PanE/ApbA DN605_RS03570 PF00293 NUDIX domain DN605_RS03575 PF01554 MatE DN605_RS03580 PF06874 Firmicute fructose-1,6-bisphosphatase DN605_RS03605 PF00586 AIR synthase related protein, N-terminal domain DN605_RS03605 PF02769 AIR synthase related protein, C-terminal domain DN605_RS03605 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DN605_RS03610 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN605_RS03615 PF02578 Multi-copper polyphenol oxidoreductase laccase DN605_RS03620 PF01938 TRAM domain DN605_RS03620 PF05958 tRNA (Uracil-5-)-methyltransferase DN605_RS03630 PF00817 impB/mucB/samB family DN605_RS03630 PF11799 impB/mucB/samB family C-terminal domain DN605_RS03635 PF01384 Phosphate transporter family DN605_RS03640 PF00920 Dehydratase family DN605_RS03645 PF06961 Protein of unknown function (DUF1294) DN605_RS03650 PF00436 Single-strand binding protein family DN605_RS03655 PF02508 Rnf-Nqr subunit, membrane protein DN605_RS03660 PF03116 NQR2, RnfD, RnfE family DN605_RS03665 PF10531 SLBB domain DN605_RS03665 PF13375 RnfC Barrel sandwich hybrid domain DN605_RS03665 PF13237 4Fe-4S dicluster domain DN605_RS03665 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN605_RS03680 PF00009 Elongation factor Tu GTP binding domain DN605_RS03680 PF16658 Class II release factor RF3, C-terminal domain DN605_RS03680 PF03144 Elongation factor Tu domain 2 DN605_RS03700 PF08264 Anticodon-binding domain of tRNA DN605_RS03700 PF01588 Putative tRNA binding domain DN605_RS03700 PF09334 tRNA synthetases class I (M) DN605_RS03715 PF01381 Helix-turn-helix DN605_RS03745 PF03746 LamB/YcsF family DN605_RS03755 PF02682 Carboxyltransferase domain, subdomain C and D DN605_RS03760 PF02626 Carboxyltransferase domain, subdomain A and B DN605_RS03765 PF07286 Protein of unknown function (DUF1445) DN605_RS03770 PF01327 Polypeptide deformylase DN605_RS03775 PF12850 Calcineurin-like phosphoesterase superfamily domain DN605_RS03850 PF03606 C4-dicarboxylate anaerobic carrier DN605_RS03855 PF11798 IMS family HHH motif DN605_RS03855 PF00817 impB/mucB/samB family DN605_RS03855 PF11799 impB/mucB/samB family C-terminal domain DN605_RS03955 PF09856 Predicted transcriptional regulator (DUF2083) DN605_RS03955 PF06114 IrrE N-terminal-like domain DN605_RS03955 PF01381 Helix-turn-helix DN605_RS04010 PF00589 Phage integrase family DN605_RS04010 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS04025 PF02954 Bacterial regulatory protein, Fis family DN605_RS04025 PF00158 Sigma-54 interaction domain DN605_RS04025 PF13426 PAS domain DN605_RS04035 PF02317 NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain DN605_RS04050 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DN605_RS04050 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DN605_RS04060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS04060 PF13188 PAS domain DN605_RS04060 PF08448 PAS fold DN605_RS04060 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS04060 PF00072 Response regulator receiver domain DN605_RS04070 PF00486 Transcriptional regulatory protein, C terminal DN605_RS04070 PF00072 Response regulator receiver domain DN605_RS04075 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DN605_RS04075 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DN605_RS04080 PF08218 Citrate lyase ligase C-terminal domain DN605_RS04085 PF04223 Citrate lyase, alpha subunit (CitF) DN605_RS04090 PF03328 HpcH/HpaI aldolase/citrate lyase family DN605_RS04095 PF06857 Malonate decarboxylase delta subunit (MdcD) DN605_RS04100 PF01546 Peptidase family M20/M25/M40 DN605_RS04105 PF03606 C4-dicarboxylate anaerobic carrier DN605_RS04110 PF03466 LysR substrate binding domain DN605_RS04110 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS04115 PF03466 LysR substrate binding domain DN605_RS04115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS04120 PF01926 50S ribosome-binding GTPase DN605_RS04120 PF06071 Protein of unknown function (DUF933) DN605_RS04130 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DN605_RS04130 PF00056 lactate/malate dehydrogenase, NAD binding domain DN605_RS04140 PF07969 Amidohydrolase family DN605_RS04150 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DN605_RS04175 PF00575 S1 RNA binding domain DN605_RS04180 PF01979 Amidohydrolase family DN605_RS04185 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DN605_RS04185 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DN605_RS04190 PF00005 ABC transporter DN605_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS04200 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN605_RS04205 PF00269 Small, acid-soluble spore proteins, alpha/beta type DN605_RS04215 PF01648 4'-phosphopantetheinyl transferase superfamily DN605_RS04225 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN605_RS04235 PF03960 ArsC family DN605_RS04240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS04240 PF03466 LysR substrate binding domain DN605_RS04245 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN605_RS04245 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN605_RS04250 PF01960 ArgJ family DN605_RS04255 PF00696 Amino acid kinase family DN605_RS04260 PF00202 Aminotransferase class-III DN605_RS04265 PF03553 Na+/H+ antiporter family DN605_RS04270 PF01168 Alanine racemase, N-terminal domain DN605_RS04275 PF01272 Transcription elongation factor, GreA/GreB, C-term DN605_RS04275 PF03449 Transcription elongation factor, N-terminal DN605_RS04305 PF00005 ABC transporter DN605_RS04310 PF00005 ABC transporter DN605_RS04310 PF12399 Branched-chain amino acid ATP-binding cassette transporter DN605_RS04315 PF02653 Branched-chain amino acid transport system / permease component DN605_RS04315 PF11862 Domain of unknown function (DUF3382) DN605_RS04320 PF02653 Branched-chain amino acid transport system / permease component DN605_RS04330 PF00072 Response regulator receiver domain DN605_RS04335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS04335 PF00989 PAS fold DN605_RS04335 PF17203 Single cache domain 3 DN605_RS04335 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN605_RS04340 PF00119 ATP synthase A chain DN605_RS04345 PF00137 ATP synthase subunit C DN605_RS04350 PF00430 ATP synthase B/B' CF(0) DN605_RS04355 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN605_RS04355 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN605_RS04355 PF00306 ATP synthase alpha/beta chain, C terminal domain DN605_RS04360 PF00231 ATP synthase DN605_RS04365 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN605_RS04365 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN605_RS04370 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DN605_RS04370 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DN605_RS04415 PF00392 Bacterial regulatory proteins, gntR family DN605_RS04415 PF00155 Aminotransferase class I and II DN605_RS04425 PF02272 DHHA1 domain DN605_RS04425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN605_RS04425 PF01411 tRNA synthetases class II (A) DN605_RS04435 PF02567 Phenazine biosynthesis-like protein DN605_RS04455 PF00005 ABC transporter DN605_RS04455 PF12704 MacB-like periplasmic core domain DN605_RS04455 PF02687 FtsX-like permease family DN605_RS04475 PF02677 Epoxyqueuosine reductase QueH DN605_RS04485 PF12116 Stage III sporulation protein D DN605_RS04490 PF05239 PRC-barrel domain DN605_RS04495 PF00209 Sodium:neurotransmitter symporter family DN605_RS04515 PF01554 MatE DN605_RS04535 PF06968 Biotin and Thiamin Synthesis associated domain DN605_RS04535 PF04055 Radical SAM superfamily DN605_RS04540 PF02632 BioY family DN605_RS04550 PF02653 Branched-chain amino acid transport system / permease component DN605_RS04555 PF00005 ABC transporter DN605_RS04560 PF00005 ABC transporter DN605_RS04560 PF00664 ABC transporter transmembrane region DN605_RS04565 PF00664 ABC transporter transmembrane region DN605_RS04565 PF00005 ABC transporter DN605_RS04570 PF13411 MerR HTH family regulatory protein DN605_RS04570 PF06445 GyrI-like small molecule binding domain DN605_RS04575 PF00072 Response regulator receiver domain DN605_RS04575 PF08664 YcbB domain DN605_RS04580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS04580 PF00989 PAS fold DN605_RS04580 PF17203 Single cache domain 3 DN605_RS04580 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DN605_RS04645 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN605_RS04680 PF06074 Protein of unknown function (DUF935) DN605_RS04700 PF10124 Mu-like prophage major head subunit gpT DN605_RS04820 PF13932 GidA associated domain DN605_RS04820 PF01134 Glucose inhibited division protein A DN605_RS04830 PF00753 Metallo-beta-lactamase superfamily DN605_RS04830 PF16123 Hydroxyacylglutathione hydrolase C-terminus DN605_RS04840 PF03099 Biotin/lipoate A/B protein ligase family DN605_RS04840 PF02237 Biotin protein ligase C terminal domain DN605_RS04840 PF08279 HTH domain DN605_RS04845 PF05222 Alanine dehydrogenase/PNT, N-terminal domain DN605_RS04845 PF01262 Alanine dehydrogenase/PNT, C-terminal domain DN605_RS04850 PF03553 Na+/H+ antiporter family DN605_RS04855 PF00303 Thymidylate synthase DN605_RS04860 PF00186 Dihydrofolate reductase DN605_RS04875 PF04294 VanW like protein DN605_RS04890 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DN605_RS04890 PF02844 Phosphoribosylglycinamide synthetase, N domain DN605_RS04890 PF02843 Phosphoribosylglycinamide synthetase, C domain DN605_RS04895 PF01808 AICARFT/IMPCHase bienzyme DN605_RS04895 PF02142 MGS-like domain DN605_RS04920 PF00551 Formyl transferase DN605_RS04925 PF00586 AIR synthase related protein, N-terminal domain DN605_RS04925 PF02769 AIR synthase related protein, C-terminal domain DN605_RS04930 PF00156 Phosphoribosyl transferase domain DN605_RS04935 PF01259 SAICAR synthetase DN605_RS04940 PF00731 AIR carboxylase DN605_RS04950 PF01569 PAP2 superfamily DN605_RS04965 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN605_RS04965 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN605_RS04970 PF00465 Iron-containing alcohol dehydrogenase DN605_RS04995 PF00318 Ribosomal protein S2 DN605_RS05000 PF00889 Elongation factor TS DN605_RS05015 PF03894 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase DN605_RS05015 PF09363 XFP C-terminal domain DN605_RS05015 PF09364 XFP N-terminal domain DN605_RS05020 PF08502 LeuA allosteric (dimerisation) domain DN605_RS05020 PF00682 HMGL-like DN605_RS05025 PF00924 Mechanosensitive ion channel DN605_RS05025 PF05552 Conserved TM helix DN605_RS05030 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN605_RS05030 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN605_RS05055 PF00849 RNA pseudouridylate synthase DN605_RS05055 PF01479 S4 domain DN605_RS05060 PF07905 Purine catabolism regulatory protein-like family DN605_RS05060 PF17853 GGDEF-like domain DN605_RS05060 PF13556 PucR C-terminal helix-turn-helix domain DN605_RS05065 PF00005 ABC transporter DN605_RS05070 PF18075 FtsX extracellular domain DN605_RS05070 PF02687 FtsX-like permease family DN605_RS05075 PF01551 Peptidase family M23 DN605_RS05075 PF10145 Phage-related minor tail protein DN605_RS05075 PF01464 Transglycosylase SLT domain DN605_RS05085 PF03449 Transcription elongation factor, N-terminal DN605_RS05085 PF01272 Transcription elongation factor, GreA/GreB, C-term DN605_RS05090 PF01336 OB-fold nucleic acid binding domain DN605_RS05090 PF00152 tRNA synthetases class II (D, K and N) DN605_RS05100 PF00589 Phage integrase family DN605_RS05100 PF02920 DNA binding domain of tn916 integrase DN605_RS05175 PF00149 Calcineurin-like phosphoesterase DN605_RS05210 PF00692 dUTPase DN605_RS05245 PF02511 Thymidylate synthase complementing protein DN605_RS05250 PF01471 Putative peptidoglycan binding domain DN605_RS05250 PF07486 Cell Wall Hydrolase DN605_RS05255 PF02811 PHP domain DN605_RS05255 PF14579 Helix-hairpin-helix motif DN605_RS05255 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN605_RS05255 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN605_RS05290 PF00145 C-5 cytosine-specific DNA methylase DN605_RS05295 PF00145 C-5 cytosine-specific DNA methylase DN605_RS05310 PF01476 LysM domain DN605_RS05310 PF06725 3D domain DN605_RS05380 PF04011 LemA family DN605_RS05390 PF00709 Adenylosuccinate synthetase DN605_RS05400 PF00226 DnaJ domain DN605_RS05400 PF01556 DnaJ C terminal domain DN605_RS05635 PF00589 Phage integrase family DN605_RS05670 PF00266 Aminotransferase class-V DN605_RS05705 PF00216 Bacterial DNA-binding protein DN605_RS05840 PF03237 Terminase-like family DN605_RS05910 PF00574 Clp protease DN605_RS06075 PF16569 Gram-positive pilin backbone subunit 2, Cna-B-like domain DN605_RS06075 PF18002 T6 antigen Ig like domain DN605_RS06075 PF17802 Prealbumin-like fold domain DN605_RS06075 PF00746 LPXTG cell wall anchor motif DN605_RS06100 PF00072 Response regulator receiver domain DN605_RS06130 PF13173 AAA domain DN605_RS06130 PF13635 Domain of unknown function (DUF4143) DN605_RS06150 PF01043 SecA preprotein cross-linking domain DN605_RS06150 PF07516 SecA Wing and Scaffold domain DN605_RS06150 PF07517 SecA DEAD-like domain DN605_RS06150 PF02810 SEC-C motif DN605_RS06160 PF12833 Helix-turn-helix domain DN605_RS06160 PF02311 AraC-like ligand binding domain DN605_RS06185 PF00005 ABC transporter DN605_RS06250 PF17910 FeoB cytosolic helical domain DN605_RS06250 PF07670 Nucleoside recognition DN605_RS06250 PF02421 Ferrous iron transport protein B DN605_RS06250 PF07664 Ferrous iron transport protein B C terminus DN605_RS06260 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN605_RS06260 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN605_RS06275 PF02535 ZIP Zinc transporter DN605_RS06285 PF13305 Tetracyclin repressor-like, C-terminal domain DN605_RS06285 PF00440 Bacterial regulatory proteins, tetR family DN605_RS06290 PF00664 ABC transporter transmembrane region DN605_RS06290 PF00005 ABC transporter DN605_RS06290 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06290 PF04954 Siderophore-interacting protein DN605_RS06295 PF00664 ABC transporter transmembrane region DN605_RS06295 PF00005 ABC transporter DN605_RS06310 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS06315 PF12911 N-terminal TM domain of oligopeptide transport permease C DN605_RS06315 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS06320 PF00005 ABC transporter DN605_RS06325 PF00005 ABC transporter DN605_RS06330 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN605_RS06345 PF04954 Siderophore-interacting protein DN605_RS06345 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06345 PF00005 ABC transporter DN605_RS06345 PF00664 ABC transporter transmembrane region DN605_RS06350 PF00664 ABC transporter transmembrane region DN605_RS06350 PF00005 ABC transporter DN605_RS06370 PF00005 ABC transporter DN605_RS06380 PF00664 ABC transporter transmembrane region DN605_RS06380 PF04954 Siderophore-interacting protein DN605_RS06380 PF00005 ABC transporter DN605_RS06380 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06385 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06385 PF00005 ABC transporter DN605_RS06385 PF00664 ABC transporter transmembrane region DN605_RS06385 PF04954 Siderophore-interacting protein DN605_RS06395 PF00486 Transcriptional regulatory protein, C terminal DN605_RS06395 PF00072 Response regulator receiver domain DN605_RS06405 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DN605_RS06425 PF12833 Helix-turn-helix domain DN605_RS06425 PF12852 Cupin DN605_RS06440 PF00005 ABC transporter DN605_RS06445 PF12833 Helix-turn-helix domain DN605_RS06445 PF02311 AraC-like ligand binding domain DN605_RS06460 PF00005 ABC transporter DN605_RS06505 PF12833 Helix-turn-helix domain DN605_RS06505 PF02311 AraC-like ligand binding domain DN605_RS06520 PF00005 ABC transporter DN605_RS06520 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06520 PF04954 Siderophore-interacting protein DN605_RS06520 PF00664 ABC transporter transmembrane region DN605_RS06525 PF00664 ABC transporter transmembrane region DN605_RS06525 PF04954 Siderophore-interacting protein DN605_RS06525 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06525 PF00005 ABC transporter DN605_RS06550 PF00005 ABC transporter DN605_RS06555 PF18357 Diphteria toxin repressor SH3 domain DN605_RS06555 PF01325 Iron dependent repressor, N-terminal DNA binding domain DN605_RS06555 PF02742 Iron dependent repressor, metal binding and dimerisation domain DN605_RS06560 PF00440 Bacterial regulatory proteins, tetR family DN605_RS06570 PF00664 ABC transporter transmembrane region DN605_RS06570 PF04954 Siderophore-interacting protein DN605_RS06570 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06570 PF00005 ABC transporter DN605_RS06575 PF00664 ABC transporter transmembrane region DN605_RS06575 PF00005 ABC transporter DN605_RS06585 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DN605_RS06590 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS06600 PF00005 ABC transporter DN605_RS06605 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DN605_RS06605 PF00005 ABC transporter DN605_RS06630 PF01695 IstB-like ATP binding protein DN605_RS06675 PF08241 Methyltransferase domain DN605_RS06680 PF00009 Elongation factor Tu GTP binding domain DN605_RS06680 PF14492 Elongation Factor G, domain II DN605_RS06680 PF03764 Elongation factor G, domain IV DN605_RS06680 PF00679 Elongation factor G C-terminus DN605_RS06695 PF01554 MatE DN605_RS06700 PF12833 Helix-turn-helix domain DN605_RS06705 PF00005 ABC transporter DN605_RS06705 PF00664 ABC transporter transmembrane region DN605_RS06710 PF00664 ABC transporter transmembrane region DN605_RS06710 PF00005 ABC transporter DN605_RS06750 PF01554 MatE DN605_RS06755 PF01554 MatE DN605_RS06810 PF00005 ABC transporter DN605_RS06810 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06810 PF04954 Siderophore-interacting protein DN605_RS06810 PF00664 ABC transporter transmembrane region DN605_RS06815 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06815 PF00005 ABC transporter DN605_RS06815 PF00664 ABC transporter transmembrane region DN605_RS06815 PF04954 Siderophore-interacting protein DN605_RS06825 PF00216 Bacterial DNA-binding protein DN605_RS06830 PF13649 Methyltransferase domain DN605_RS06835 PF01209 ubiE/COQ5 methyltransferase family DN605_RS06840 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN605_RS06845 PF00578 AhpC/TSA family DN605_RS06850 PF00440 Bacterial regulatory proteins, tetR family DN605_RS06855 PF08021 Siderophore-interacting FAD-binding domain DN605_RS06855 PF04954 Siderophore-interacting protein DN605_RS06855 PF00005 ABC transporter DN605_RS06855 PF00664 ABC transporter transmembrane region DN605_RS06860 PF00005 ABC transporter DN605_RS06860 PF00664 ABC transporter transmembrane region DN605_RS06900 PF06463 Molybdenum Cofactor Synthesis C DN605_RS06900 PF04055 Radical SAM superfamily DN605_RS06970 PF00005 ABC transporter DN605_RS06970 PF00664 ABC transporter transmembrane region DN605_RS06975 PF00664 ABC transporter transmembrane region DN605_RS06975 PF00005 ABC transporter DN605_RS06980 PF00005 ABC transporter DN605_RS06995 PF02311 AraC-like ligand binding domain DN605_RS06995 PF12833 Helix-turn-helix domain DN605_RS07130 PF13307 Helicase C-terminal domain DN605_RS07130 PF06733 DEAD_2 DN605_RS07290 PF14490 Helix-hairpin-helix containing domain DN605_RS07290 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN605_RS07290 PF13538 UvrD-like helicase C-terminal domain DN605_RS07375 PF00589 Phage integrase family DN605_RS07375 PF02899 Phage integrase, N-terminal SAM-like domain DN605_RS07380 PF08264 Anticodon-binding domain of tRNA DN605_RS07380 PF01588 Putative tRNA binding domain DN605_RS07380 PF09334 tRNA synthetases class I (M) DN605_RS07385 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN605_RS07385 PF00588 SpoU rRNA Methylase family DN605_RS07395 PF02481 DNA recombination-mediator protein A DN605_RS07400 PF01131 DNA topoisomerase DN605_RS07400 PF01751 Toprim domain DN605_RS07400 PF01396 Topoisomerase DNA binding C4 zinc finger DN605_RS07410 PF01381 Helix-turn-helix DN605_RS07415 PF01134 Glucose inhibited division protein A DN605_RS07425 PF02504 Fatty acid synthesis protein DN605_RS07430 PF00550 Phosphopantetheine attachment site DN605_RS07435 PF00035 Double-stranded RNA binding motif DN605_RS07435 PF14622 Ribonuclease-III-like DN605_RS07440 PF01554 MatE DN605_RS07445 PF00916 Sulfate permease family DN605_RS07445 PF01740 STAS domain DN605_RS07450 PF00132 Bacterial transferase hexapeptide (six repeats) DN605_RS07455 PF09190 DALR domain DN605_RS07455 PF01406 tRNA synthetases class I (C) catalytic domain DN605_RS07460 PF05437 Branched-chain amino acid transport protein (AzlD) DN605_RS07465 PF03591 AzlC protein DN605_RS07475 PF01595 Cyclin M transmembrane N-terminal domain DN605_RS07475 PF03471 Transporter associated domain DN605_RS07475 PF00571 CBS domain DN605_RS07510 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS07510 PF03389 MobA/MobL family DN605_RS07510 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS07515 PF01807 CHC2 zinc finger DN605_RS07515 PF10410 DnaB-helicase binding domain of primase DN605_RS07515 PF08275 DNA primase catalytic core, N-terminal domain DN605_RS07515 PF08278 DNA primase DnaG DnaB-binding DN605_RS07530 PF09035 Excisionase from transposon Tn916 DN605_RS07535 PF00589 Phage integrase family DN605_RS07535 PF02920 DNA binding domain of tn916 integrase DN605_RS07540 PF01451 Low molecular weight phosphotyrosine protein phosphatase DN605_RS07545 PF12833 Helix-turn-helix domain DN605_RS07550 PF01144 Coenzyme A transferase DN605_RS07555 PF01144 Coenzyme A transferase DN605_RS07560 PF01039 Carboxyl transferase domain DN605_RS07565 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN605_RS07570 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DN605_RS07575 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DN605_RS07580 PF00364 Biotin-requiring enzyme DN605_RS07595 PF00364 Biotin-requiring enzyme DN605_RS07595 PF00682 HMGL-like DN605_RS07595 PF02436 Conserved carboxylase domain DN605_RS07600 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DN605_RS07605 PF04960 Glutaminase DN605_RS07610 PF01566 Natural resistance-associated macrophage protein DN605_RS07615 PF01614 Bacterial transcriptional regulator DN605_RS07615 PF09339 IclR helix-turn-helix domain DN605_RS07620 PF00491 Arginase family DN605_RS07635 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS07635 PF03466 LysR substrate binding domain DN605_RS07650 PF05525 Branched-chain amino acid transport protein DN605_RS07655 PF02906 Iron only hydrogenase large subunit, C-terminal domain DN605_RS07655 PF02256 Iron hydrogenase small subunit DN605_RS07655 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DN605_RS07655 PF00037 4Fe-4S binding domain DN605_RS07660 PF00037 4Fe-4S binding domain DN605_RS07660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN605_RS07660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DN605_RS07675 PF00795 Carbon-nitrogen hydrolase DN605_RS07680 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN605_RS07680 PF03129 Anticodon binding domain DN605_RS07680 PF02824 TGS domain DN605_RS07680 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN605_RS07690 PF03023 Lipid II flippase MurJ DN605_RS07720 PF00364 Biotin-requiring enzyme DN605_RS07720 PF00682 HMGL-like DN605_RS07720 PF02436 Conserved carboxylase domain DN605_RS07725 PF08281 Sigma-70, region 4 DN605_RS07725 PF04542 Sigma-70 region 2 DN605_RS07740 PF13443 Cro/C1-type HTH DNA-binding domain DN605_RS07765 PF00149 Calcineurin-like phosphoesterase DN605_RS07785 PF13361 UvrD-like helicase C-terminal domain DN605_RS07785 PF00580 UvrD/REP helicase N-terminal domain DN605_RS07785 PF12705 PD-(D/E)XK nuclease superfamily DN605_RS07790 PF00483 Nucleotidyl transferase DN605_RS07800 PF00710 Asparaginase, N-terminal DN605_RS07800 PF17763 Glutaminase/Asparaginase C-terminal domain DN605_RS07810 PF00149 Calcineurin-like phosphoesterase DN605_RS07810 PF02872 5'-nucleotidase, C-terminal domain DN605_RS07815 PF00175 Oxidoreductase NAD-binding domain DN605_RS07815 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN605_RS07820 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN605_RS07820 PF13247 4Fe-4S dicluster domain DN605_RS07820 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DN605_RS07835 PF00486 Transcriptional regulatory protein, C terminal DN605_RS07835 PF00072 Response regulator receiver domain DN605_RS07840 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS07840 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS07850 PF00072 Response regulator receiver domain DN605_RS07850 PF00486 Transcriptional regulatory protein, C terminal DN605_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS07855 PF00672 HAMP domain DN605_RS07855 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS07860 PF07136 Protein of unknown function (DUF1385) DN605_RS07865 PF17827 PrmC N-terminal domain DN605_RS07865 PF05175 Methyltransferase small domain DN605_RS07870 PF00154 recA bacterial DNA recombination protein DN605_RS07880 PF00919 Uncharacterized protein family UPF0004 DN605_RS07880 PF18693 TRAM domain DN605_RS07880 PF04055 Radical SAM superfamily DN605_RS07885 PF01066 CDP-alcohol phosphatidyltransferase DN605_RS07895 PF01268 Formate--tetrahydrofolate ligase DN605_RS07900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS07900 PF03466 LysR substrate binding domain DN605_RS07905 PF13823 Alcohol dehydrogenase GroES-associated DN605_RS07905 PF00107 Zinc-binding dehydrogenase DN605_RS07905 PF08240 Alcohol dehydrogenase GroES-like domain DN605_RS07910 PF00830 Ribosomal L28 family DN605_RS07915 PF02603 HPr Serine kinase N terminus DN605_RS07915 PF07475 HPr Serine kinase C-terminal domain DN605_RS07920 PF00480 ROK family DN605_RS07925 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain DN605_RS07925 PF01565 FAD binding domain DN605_RS07930 PF03668 P-loop ATPase protein family DN605_RS07935 PF01933 Uncharacterised protein family UPF0052 DN605_RS07940 PF02650 WhiA C-terminal HTH domain DN605_RS07940 PF14527 WhiA LAGLIDADG-like domain DN605_RS07940 PF10298 WhiA N-terminal LAGLIDADG-like domain DN605_RS07950 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN605_RS07950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN605_RS07950 PF02811 PHP domain DN605_RS07950 PF01336 OB-fold nucleic acid binding domain DN605_RS07950 PF14579 Helix-hairpin-helix motif DN605_RS07960 PF00291 Pyridoxal-phosphate dependent enzyme DN605_RS07975 PF00884 Sulfatase DN605_RS07980 PF01027 Inhibitor of apoptosis-promoting Bax1 DN605_RS07985 PF01235 Sodium:alanine symporter family DN605_RS07995 PF03477 ATP cone domain DN605_RS08005 PF13333 Integrase core domain DN605_RS08005 PF00665 Integrase core domain DN605_RS08015 PF03483 B3/4 domain DN605_RS08015 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DN605_RS08015 PF03147 Ferredoxin-fold anticodon binding domain DN605_RS08015 PF03484 tRNA synthetase B5 domain DN605_RS08015 PF01588 Putative tRNA binding domain DN605_RS08020 PF01409 tRNA synthetases class II core domain (F) DN605_RS08020 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DN605_RS08025 PF00005 ABC transporter DN605_RS08030 PF01458 Uncharacterized protein family (UPF0051) DN605_RS08040 PF03853 YjeF-related protein N-terminus DN605_RS08040 PF01256 Carbohydrate kinase DN605_RS08050 PF01168 Alanine racemase, N-terminal domain DN605_RS08050 PF00842 Alanine racemase, C-terminal domain DN605_RS08055 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DN605_RS08080 PF13581 Histidine kinase-like ATPase domain DN605_RS08085 PF04545 Sigma-70, region 4 DN605_RS08085 PF04542 Sigma-70 region 2 DN605_RS08085 PF04539 Sigma-70 region 3 DN605_RS08095 PF07977 FabA-like domain DN605_RS08100 PF00109 Beta-ketoacyl synthase, N-terminal domain DN605_RS08100 PF02801 Beta-ketoacyl synthase, C-terminal domain DN605_RS08110 PF00698 Acyl transferase domain DN605_RS08120 PF03060 Nitronate monooxygenase DN605_RS08125 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal DN605_RS08125 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DN605_RS08130 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DN605_RS08135 PF17848 Acetyl-coA carboxylase zinc finger domain DN605_RS08135 PF01039 Carboxyl transferase domain DN605_RS08140 PF00289 Biotin carboxylase, N-terminal domain DN605_RS08140 PF02785 Biotin carboxylase C-terminal domain DN605_RS08140 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN605_RS08145 PF00364 Biotin-requiring enzyme DN605_RS08150 PF00550 Phosphopantetheine attachment site DN605_RS08155 PF00486 Transcriptional regulatory protein, C terminal DN605_RS08155 PF00072 Response regulator receiver domain DN605_RS08160 PF13493 Domain of unknown function (DUF4118) DN605_RS08160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS08160 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS08160 PF02702 Osmosensitive K+ channel His kinase sensor domain DN605_RS08165 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain DN605_RS08165 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN605_RS08175 PF02632 BioY family DN605_RS08185 PF00202 Aminotransferase class-III DN605_RS08230 PF00781 Diacylglycerol kinase catalytic domain DN605_RS08235 PF08281 Sigma-70, region 4 DN605_RS08235 PF04542 Sigma-70 region 2 DN605_RS08250 PF01026 TatD related DNase DN605_RS08270 PF01496 V-type ATPase 116kDa subunit family DN605_RS08275 PF00137 ATP synthase subunit C DN605_RS08280 PF01991 ATP synthase (E/31 kDa) subunit DN605_RS08290 PF01990 ATP synthase (F/14-kDa) subunit DN605_RS08295 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN605_RS08295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN605_RS08295 PF16886 ATPsynthase alpha/beta subunit N-term extension DN605_RS08300 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DN605_RS08300 PF02874 ATP synthase alpha/beta family, beta-barrel domain DN605_RS08305 PF01813 ATP synthase subunit D DN605_RS08310 PF02915 Rubrerythrin DN605_RS08315 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN605_RS08315 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN605_RS08320 PF00005 ABC transporter DN605_RS08325 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS08330 PF00497 Bacterial extracellular solute-binding proteins, family 3 DN605_RS08335 PF01168 Alanine racemase, N-terminal domain DN605_RS08335 PF00842 Alanine racemase, C-terminal domain DN605_RS08355 PF00750 tRNA synthetases class I (R) DN605_RS08355 PF05746 DALR anticodon binding domain DN605_RS08355 PF03485 Arginyl tRNA synthetase N terminal domain DN605_RS08365 PF00293 NUDIX domain DN605_RS08370 PF17827 PrmC N-terminal domain DN605_RS08370 PF05175 Methyltransferase small domain DN605_RS08375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DN605_RS08380 PF18277 AbrB C-terminal domain DN605_RS08380 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DN605_RS08390 PF07670 Nucleoside recognition DN605_RS08400 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN605_RS08400 PF01411 tRNA synthetases class II (A) DN605_RS08400 PF02272 DHHA1 domain DN605_RS08405 PF00381 PTS HPr component phosphorylation site DN605_RS08410 PF05524 PEP-utilising enzyme, N-terminal DN605_RS08410 PF02896 PEP-utilising enzyme, TIM barrel domain DN605_RS08410 PF00391 PEP-utilising enzyme, mobile domain DN605_RS08415 PF00588 SpoU rRNA Methylase family DN605_RS08420 PF00942 Cellulose binding domain DN605_RS08420 PF12791 Anti-sigma factor N-terminus DN605_RS08425 PF08281 Sigma-70, region 4 DN605_RS08425 PF04542 Sigma-70 region 2 DN605_RS08440 PF13545 Crp-like helix-turn-helix domain DN605_RS08440 PF00027 Cyclic nucleotide-binding domain DN605_RS08445 PF00085 Thioredoxin DN605_RS08450 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN605_RS08460 PF02683 Cytochrome C biogenesis protein transmembrane region DN605_RS08540 PF01076 Plasmid recombination enzyme DN605_RS08550 PF02796 Helix-turn-helix domain of resolvase DN605_RS08550 PF00239 Resolvase, N terminal domain DN605_RS08560 PF00183 Hsp90 protein DN605_RS08610 PF01471 Putative peptidoglycan binding domain DN605_RS08610 PF07486 Cell Wall Hydrolase DN605_RS08615 PF01029 NusB family DN605_RS08620 PF00814 Glycoprotease family DN605_RS08625 PF02601 Exonuclease VII, large subunit DN605_RS08625 PF13742 OB-fold nucleic acid binding domain DN605_RS08635 PF00348 Polyprenyl synthetase DN605_RS08645 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN605_RS08645 PF02779 Transketolase, pyrimidine binding domain DN605_RS08645 PF02780 Transketolase, C-terminal domain DN605_RS08650 PF01479 S4 domain DN605_RS08650 PF01728 FtsJ-like methyltransferase DN605_RS08655 PF01513 ATP-NAD kinase DN605_RS08660 PF02863 Arginine repressor, C-terminal domain DN605_RS08660 PF01316 Arginine repressor, DNA binding domain DN605_RS08665 PF13476 AAA domain DN605_RS08700 PF00361 Proton-conducting membrane transporter DN605_RS08705 PF00361 Proton-conducting membrane transporter DN605_RS08710 PF00361 Proton-conducting membrane transporter DN605_RS08715 PF00361 Proton-conducting membrane transporter DN605_RS08720 PF04545 Sigma-70, region 4 DN605_RS08720 PF04539 Sigma-70 region 3 DN605_RS08720 PF04542 Sigma-70 region 2 DN605_RS08725 PF02535 ZIP Zinc transporter DN605_RS08730 PF00696 Amino acid kinase family DN605_RS08735 PF01765 Ribosome recycling factor DN605_RS08740 PF01255 Putative undecaprenyl diphosphate synthase DN605_RS08750 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain DN605_RS08750 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase DN605_RS08750 PF13288 DXP reductoisomerase C-terminal domain DN605_RS08755 PF13180 PDZ domain DN605_RS08755 PF02163 Peptidase family M50 DN605_RS08760 PF04551 GcpE protein DN605_RS08765 PF11490 DNA polymerase III polC-type N-terminus II DN605_RS08765 PF07733 Bacterial DNA polymerase III alpha NTPase domain DN605_RS08765 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DN605_RS08765 PF00929 Exonuclease DN605_RS08765 PF02811 PHP domain DN605_RS08765 PF14579 Helix-hairpin-helix motif DN605_RS08780 PF02562 PhoH-like protein DN605_RS08785 PF02130 Uncharacterized protein family UPF0054 DN605_RS08795 PF07650 KH domain DN605_RS08795 PF01926 50S ribosome-binding GTPase DN605_RS08800 PF11967 Recombination protein O N terminal DN605_RS08800 PF02565 Recombination protein O C terminal DN605_RS08805 PF01432 Peptidase family M3 DN605_RS08805 PF08439 Oligopeptidase F DN605_RS08810 PF00155 Aminotransferase class I and II DN605_RS08815 PF00475 Imidazoleglycerol-phosphate dehydratase DN605_RS08820 PF13393 Histidyl-tRNA synthetase DN605_RS08825 PF01634 ATP phosphoribosyltransferase DN605_RS08830 PF00815 Histidinol dehydrogenase DN605_RS08835 PF00117 Glutamine amidotransferase class-I DN605_RS08840 PF00977 Histidine biosynthesis protein DN605_RS08845 PF00977 Histidine biosynthesis protein DN605_RS08850 PF01502 Phosphoribosyl-AMP cyclohydrolase DN605_RS08855 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DN605_RS08860 PF02811 PHP domain DN605_RS08875 PF03979 Sigma-70 factor, region 1.1 DN605_RS08875 PF04545 Sigma-70, region 4 DN605_RS08875 PF04539 Sigma-70 region 3 DN605_RS08875 PF04542 Sigma-70 region 2 DN605_RS08875 PF00140 Sigma-70 factor, region 1.2 DN605_RS08880 PF10410 DnaB-helicase binding domain of primase DN605_RS08880 PF08275 DNA primase catalytic core, N-terminal domain DN605_RS08880 PF01807 CHC2 zinc finger DN605_RS08885 PF13286 Phosphohydrolase-associated domain DN605_RS08885 PF01966 HD domain DN605_RS08890 PF00171 Aldehyde dehydrogenase family DN605_RS08895 PF01098 Cell cycle protein DN605_RS08900 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DN605_RS08920 PF00375 Sodium:dicarboxylate symporter family DN605_RS08925 PF01842 ACT domain DN605_RS08925 PF03315 Serine dehydratase beta chain DN605_RS08930 PF03313 Serine dehydratase alpha chain DN605_RS08940 PF00579 tRNA synthetases class I (W and Y) DN605_RS08945 PF00899 ThiF family DN605_RS08960 PF05173 Dihydrodipicolinate reductase, C-terminus DN605_RS08960 PF01113 Dihydrodipicolinate reductase, N-terminus DN605_RS08965 PF00701 Dihydrodipicolinate synthetase family DN605_RS08970 PF02774 Semialdehyde dehydrogenase, dimerisation domain DN605_RS08970 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN605_RS08975 PF08486 Stage II sporulation protein DN605_RS08980 PF02547 Queuosine biosynthesis protein DN605_RS08985 PF00239 Resolvase, N terminal domain DN605_RS08985 PF02796 Helix-turn-helix domain of resolvase DN605_RS08995 PF01381 Helix-turn-helix DN605_RS09045 PF01695 IstB-like ATP binding protein DN605_RS09060 PF05866 Endodeoxyribonuclease RusA DN605_RS09085 PF00436 Single-strand binding protein family DN605_RS09095 PF01139 tRNA-splicing ligase RtcB DN605_RS09155 PF00625 Guanylate kinase DN605_RS09170 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN605_RS09170 PF02772 S-adenosylmethionine synthetase, central domain DN605_RS09170 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN605_RS09210 PF04233 Phage Mu protein F like protein DN605_RS09385 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DN605_RS09385 PF01476 LysM domain DN605_RS09480 PF00692 dUTPase DN605_RS09605 PF01555 DNA methylase DN605_RS09760 PF00145 C-5 cytosine-specific DNA methylase DN605_RS09805 PF01702 Queuine tRNA-ribosyltransferase DN605_RS09810 PF02699 Preprotein translocase subunit DN605_RS09835 PF02899 Phage integrase, N-terminal SAM-like domain DN605_RS09835 PF00589 Phage integrase family DN605_RS09840 PF00005 ABC transporter DN605_RS09840 PF16326 ABC transporter C-terminal domain DN605_RS09845 PF04073 Aminoacyl-tRNA editing domain DN605_RS09855 PF00704 Glycosyl hydrolases family 18 DN605_RS09855 PF01476 LysM domain DN605_RS09870 PF10145 Phage-related minor tail protein DN605_RS09870 PF01464 Transglycosylase SLT domain DN605_RS09870 PF01551 Peptidase family M23 DN605_RS09880 PF00571 CBS domain DN605_RS09880 PF03448 MgtE intracellular N domain DN605_RS09880 PF01769 Divalent cation transporter DN605_RS09890 PF00330 Aconitase family (aconitate hydratase) DN605_RS09895 PF00694 Aconitase C-terminal domain DN605_RS09900 PF00180 Isocitrate/isopropylmalate dehydrogenase DN605_RS09905 PF00155 Aminotransferase class I and II DN605_RS09935 PF02899 Phage integrase, N-terminal SAM-like domain DN605_RS09935 PF00589 Phage integrase family DN605_RS09945 PF18073 Rubredoxin metal binding domain DN605_RS09950 PF01520 N-acetylmuramoyl-L-alanine amidase DN605_RS09955 PF05067 Manganese containing catalase DN605_RS09960 PF12652 CotJB protein DN605_RS09965 PF13361 UvrD-like helicase C-terminal domain DN605_RS09965 PF00580 UvrD/REP helicase N-terminal domain DN605_RS09995 PF01381 Helix-turn-helix DN605_RS10000 PF00390 Malic enzyme, N-terminal domain DN605_RS10000 PF03949 Malic enzyme, NAD binding domain DN605_RS10005 PF01580 FtsK/SpoIIIE family DN605_RS10005 PF09397 Ftsk gamma domain DN605_RS10005 PF17854 FtsK alpha domain DN605_RS10010 PF02673 Bacitracin resistance protein BacA DN605_RS10015 PF00574 Clp protease DN605_RS10025 PF01554 MatE DN605_RS10035 PF02127 Aminopeptidase I zinc metalloprotease (M18) DN605_RS10040 PF01121 Dephospho-CoA kinase DN605_RS10050 PF03481 Putative GTP-binding controlling metal-binding DN605_RS10050 PF01300 Telomere recombination DN605_RS10065 PF00472 RF-1 domain DN605_RS10065 PF03462 PCRF domain DN605_RS10070 PF02698 DUF218 domain DN605_RS10075 PF12848 ABC transporter DN605_RS10075 PF16326 ABC transporter C-terminal domain DN605_RS10075 PF00005 ABC transporter DN605_RS10080 PF01225 Mur ligase family, catalytic domain DN605_RS10080 PF08245 Mur ligase middle domain DN605_RS10080 PF02875 Mur ligase family, glutamate ligase domain DN605_RS10085 PF07478 D-ala D-ala ligase C-terminus DN605_RS10085 PF01820 D-ala D-ala ligase N-terminus DN605_RS10095 PF01116 Fructose-bisphosphate aldolase class-II DN605_RS10100 PF00365 Phosphofructokinase DN605_RS10105 PF01594 AI-2E family transporter DN605_RS10110 PF00206 Lyase DN605_RS10110 PF10397 Adenylosuccinate lyase C-terminus DN605_RS10120 PF00892 EamA-like transporter family DN605_RS10125 PF03120 NAD-dependent DNA ligase OB-fold domain DN605_RS10125 PF03119 NAD-dependent DNA ligase C4 zinc finger domain DN605_RS10125 PF12826 Helix-hairpin-helix motif DN605_RS10125 PF00533 BRCA1 C Terminus (BRCT) domain DN605_RS10125 PF01653 NAD-dependent DNA ligase adenylation domain DN605_RS10135 PF06838 Methionine gamma-lyase DN605_RS10140 PF05343 M42 glutamyl aminopeptidase DN605_RS10145 PF05343 M42 glutamyl aminopeptidase DN605_RS10150 PF05343 M42 glutamyl aminopeptidase DN605_RS10155 PF08245 Mur ligase middle domain DN605_RS10180 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN605_RS10180 PF07685 CobB/CobQ-like glutamine amidotransferase domain DN605_RS10185 PF07685 CobB/CobQ-like glutamine amidotransferase domain DN605_RS10185 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN605_RS10185 PF00155 Aminotransferase class I and II DN605_RS10190 PF03186 CobD/Cbib protein DN605_RS10205 PF02654 Cobalamin-5-phosphate synthase DN605_RS10215 PF02277 Phosphoribosyltransferase DN605_RS10220 PF07685 CobB/CobQ-like glutamine amidotransferase domain DN605_RS10220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN605_RS10225 PF09547 Stage IV sporulation protein A (spore_IV_A) DN605_RS10240 PF13331 Domain of unknown function (DUF4093) DN605_RS10240 PF01751 Toprim domain DN605_RS10250 PF00892 EamA-like transporter family DN605_RS10255 PF08543 Phosphomethylpyrimidine kinase DN605_RS10260 PF12705 PD-(D/E)XK nuclease superfamily DN605_RS10265 PF00486 Transcriptional regulatory protein, C terminal DN605_RS10265 PF00072 Response regulator receiver domain DN605_RS10270 PF16736 Single Cache-like DN605_RS10270 PF00989 PAS fold DN605_RS10270 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS10270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS10275 PF00571 CBS domain DN605_RS10275 PF00478 IMP dehydrogenase / GMP reductase domain DN605_RS10295 PF01183 Glycosyl hydrolases family 25 DN605_RS10300 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase DN605_RS10320 PF00005 ABC transporter DN605_RS10335 PF01467 Cytidylyltransferase-like DN605_RS10345 PF08459 UvrC Helix-hairpin-helix N-terminal DN605_RS10345 PF02151 UvrB/uvrC motif DN605_RS10345 PF01541 GIY-YIG catalytic domain DN605_RS10350 PF04294 VanW like protein DN605_RS10355 PF00381 PTS HPr component phosphorylation site DN605_RS10360 PF01713 Smr domain DN605_RS10360 PF00488 MutS domain V DN605_RS10380 PF12697 Alpha/beta hydrolase family DN605_RS10400 PF13419 Haloacid dehalogenase-like hydrolase DN605_RS10420 PF00005 ABC transporter DN605_RS10425 PF00128 Alpha amylase, catalytic domain DN605_RS10430 PF01008 Initiation factor 2 subunit family DN605_RS10435 PF00596 Class II Aldolase and Adducin N-terminal domain DN605_RS10450 PF03652 Holliday junction resolvase DN605_RS10455 PF00589 Phage integrase family DN605_RS10460 PF03553 Na+/H+ antiporter family DN605_RS10465 PF01678 Diaminopimelate epimerase DN605_RS10470 PF00120 Glutamine synthetase, catalytic domain DN605_RS10470 PF12437 Glutamine synthetase type III N terminal DN605_RS10470 PF18318 Glutamine synthetase C-terminal domain DN605_RS10480 PF01263 Aldose 1-epimerase DN605_RS10485 PF00709 Adenylosuccinate synthetase DN605_RS10490 PF17820 PDZ domain DN605_RS10490 PF03572 Peptidase family S41 DN605_RS10490 PF01471 Putative peptidoglycan binding domain DN605_RS10495 PF02492 CobW/HypB/UreG, nucleotide-binding domain DN605_RS10495 PF07683 Cobalamin synthesis protein cobW C-terminal domain DN605_RS10505 PF00753 Metallo-beta-lactamase superfamily DN605_RS10505 PF00258 Flavodoxin DN605_RS10505 PF00301 Rubredoxin DN605_RS10510 PF00301 Rubredoxin DN605_RS10520 PF00005 ABC transporter DN605_RS10520 PF00571 CBS domain DN605_RS10525 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS10530 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS10540 PF04239 Protein of unknown function (DUF421) DN605_RS10545 PF00117 Glutamine amidotransferase class-I DN605_RS10545 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DN605_RS10550 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DN605_RS10550 PF02142 MGS-like domain DN605_RS10550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DN605_RS10555 PF02540 NAD synthase DN605_RS10555 PF00958 GMP synthase C terminal domain DN605_RS10560 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS10560 PF00589 Phage integrase family DN605_RS10595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS10595 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS10595 PF00672 HAMP domain DN605_RS10600 PF00486 Transcriptional regulatory protein, C terminal DN605_RS10600 PF00072 Response regulator receiver domain DN605_RS10615 PF01641 SelR domain DN605_RS10615 PF01625 Peptide methionine sulfoxide reductase DN605_RS10635 PF00589 Phage integrase family DN605_RS10635 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS10725 PF17762 HTH domain found in ParB protein DN605_RS10725 PF02195 ParB-like nuclease domain DN605_RS10745 PF00005 ABC transporter DN605_RS10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS10750 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS10750 PF00672 HAMP domain DN605_RS10755 PF00486 Transcriptional regulatory protein, C terminal DN605_RS10755 PF00072 Response regulator receiver domain DN605_RS10765 PF00398 Ribosomal RNA adenine dimethylase DN605_RS10770 PF01293 Phosphoenolpyruvate carboxykinase DN605_RS10775 PF00636 Ribonuclease III domain DN605_RS10780 PF05670 NFACT protein RNA binding domain DN605_RS10790 PF03977 Na+-transporting oxaloacetate decarboxylase beta subunit DN605_RS10800 PF02645 Uncharacterised protein, DegV family COG1307 DN605_RS10805 PF01746 tRNA (Guanine-1)-methyltransferase DN605_RS10820 PF01053 Cys/Met metabolism PLP-dependent enzyme DN605_RS10825 PF00291 Pyridoxal-phosphate dependent enzyme DN605_RS10830 PF00266 Aminotransferase class-V DN605_RS10835 PF01592 NifU-like N terminal domain DN605_RS10840 PF04060 Putative Fe-S cluster DN605_RS10845 PF02508 Rnf-Nqr subunit, membrane protein DN605_RS10850 PF02508 Rnf-Nqr subunit, membrane protein DN605_RS10860 PF03116 NQR2, RnfD, RnfE family DN605_RS10865 PF13237 4Fe-4S dicluster domain DN605_RS10865 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DN605_RS10865 PF13375 RnfC Barrel sandwich hybrid domain DN605_RS10865 PF10531 SLBB domain DN605_RS10870 PF00963 Cohesin domain DN605_RS10870 PF00395 S-layer homology domain DN605_RS10875 PF06971 Putative DNA-binding protein N-terminus DN605_RS10875 PF02629 CoA binding domain DN605_RS10880 PF04542 Sigma-70 region 2 DN605_RS10880 PF04545 Sigma-70, region 4 DN605_RS10885 PF03419 Sporulation factor SpoIIGA DN605_RS10915 PF03193 RsgA GTPase DN605_RS10915 PF16745 RsgA N-terminal domain DN605_RS10920 PF03793 PASTA domain DN605_RS10920 PF00069 Protein kinase domain DN605_RS10930 PF04055 Radical SAM superfamily DN605_RS10935 PF01189 16S rRNA methyltransferase RsmB/F DN605_RS10935 PF01029 NusB family DN605_RS10940 PF00551 Formyl transferase DN605_RS10940 PF02911 Formyl transferase, C-terminal domain DN605_RS10945 PF01327 Polypeptide deformylase DN605_RS10950 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DN605_RS10950 PF17764 3′ DNA-binding domain (3′BD) DN605_RS10950 PF00271 Helicase conserved C-terminal domain DN605_RS10950 PF18074 Primosomal protein N C-terminal domain DN605_RS10950 PF04851 Type III restriction enzyme, res subunit DN605_RS10955 PF01192 RNA polymerase Rpb6 DN605_RS10960 PF00625 Guanylate kinase DN605_RS10965 PF04025 Domain of unknown function (DUF370) DN605_RS10970 PF08340 Domain of unknown function (DUF1732) DN605_RS10970 PF03755 YicC-like family, N-terminal region DN605_RS10980 PF00226 DnaJ domain DN605_RS10980 PF01556 DnaJ C terminal domain DN605_RS10980 PF00684 DnaJ central domain DN605_RS11000 PF02457 DisA bacterial checkpoint controller nucleotide-binding DN605_RS11005 PF00266 Aminotransferase class-V DN605_RS11015 PF02542 YgbB family DN605_RS11020 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN605_RS11025 PF02559 CarD-like/TRCF domain DN605_RS11030 PF00575 S1 RNA binding domain DN605_RS11030 PF02401 LytB protein DN605_RS11035 PF01553 Acyltransferase DN605_RS11040 PF02224 Cytidylate kinase DN605_RS11055 PF00849 RNA pseudouridylate synthase DN605_RS11055 PF01479 S4 domain DN605_RS11060 PF00768 D-alanyl-D-alanine carboxypeptidase DN605_RS11060 PF07943 Penicillin-binding protein 5, C-terminal domain DN605_RS11075 PF04079 Segregation and condensation complex subunit ScpB DN605_RS11080 PF02616 Segregation and condensation protein ScpA DN605_RS11085 PF02163 Peptidase family M50 DN605_RS11090 PF01926 50S ribosome-binding GTPase DN605_RS11095 PF05362 Lon protease (S16) C-terminal proteolytic domain DN605_RS11095 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS11095 PF02190 ATP-dependent protease La (LON) substrate-binding domain DN605_RS11100 PF06689 ClpX C4-type zinc finger DN605_RS11100 PF10431 C-terminal, D2-small domain, of ClpB protein DN605_RS11100 PF07724 AAA domain (Cdc48 subfamily) DN605_RS11105 PF00574 Clp protease DN605_RS11110 PF05697 Bacterial trigger factor protein (TF) DN605_RS11110 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase DN605_RS11110 PF05698 Bacterial trigger factor protein (TF) C-terminus DN605_RS11120 PF00291 Pyridoxal-phosphate dependent enzyme DN605_RS11125 PF02021 Uncharacterised protein family UPF0102 DN605_RS11130 PF01351 Ribonuclease HII DN605_RS11135 PF01926 50S ribosome-binding GTPase DN605_RS11140 PF01245 Ribosomal protein L19 DN605_RS11145 PF01784 NIF3 (NGG1p interacting factor 3) DN605_RS11150 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DN605_RS11170 PF04542 Sigma-70 region 2 DN605_RS11170 PF08281 Sigma-70, region 4 DN605_RS11175 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN605_RS11175 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN605_RS11175 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN605_RS11175 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN605_RS11180 PF17864 RuvB AAA lid domain DN605_RS11180 PF05491 RuvB C-terminal winged helix domain DN605_RS11180 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN605_RS11190 PF07499 RuvA, C-terminal domain DN605_RS11190 PF01330 RuvA N terminal domain DN605_RS11195 PF02075 Crossover junction endodeoxyribonuclease RuvC DN605_RS11210 PF00291 Pyridoxal-phosphate dependent enzyme DN605_RS11215 PF01087 Galactose-1-phosphate uridyl transferase, N-terminal domain DN605_RS11215 PF02744 Galactose-1-phosphate uridyl transferase, C-terminal domain DN605_RS11220 PF16363 GDP-mannose 4,6 dehydratase DN605_RS11225 PF08544 GHMP kinases C terminal DN605_RS11225 PF00288 GHMP kinases N terminal domain DN605_RS11225 PF10509 Galactokinase galactose-binding signature DN605_RS11230 PF00356 Bacterial regulatory proteins, lacI family DN605_RS11235 PF13407 Periplasmic binding protein domain DN605_RS11245 PF00672 HAMP domain DN605_RS11245 PF06580 Histidine kinase DN605_RS11245 PF02743 Cache domain DN605_RS11245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS11250 PF12833 Helix-turn-helix domain DN605_RS11250 PF00072 Response regulator receiver domain DN605_RS11255 PF02653 Branched-chain amino acid transport system / permease component DN605_RS11260 PF00005 ABC transporter DN605_RS11265 PF13407 Periplasmic binding protein domain DN605_RS11335 PF03691 Uncharacterised protein family (UPF0167) DN605_RS11600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DN605_RS11600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DN605_RS11605 PF00521 DNA gyrase/topoisomerase IV, subunit A DN605_RS11605 PF03989 DNA gyrase C-terminal domain, beta-propeller DN605_RS11615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS11615 PF00986 DNA gyrase B subunit, carboxyl terminus DN605_RS11615 PF01751 Toprim domain DN605_RS11615 PF00204 DNA gyrase B DN605_RS11625 PF00403 Heavy-metal-associated domain DN605_RS11630 PF02583 Metal-sensitive transcriptional repressor DN605_RS11635 PF00884 Sulfatase DN605_RS11645 PF01709 Transcriptional regulator DN605_RS11650 PF00689 Cation transporting ATPase, C-terminus DN605_RS11650 PF00690 Cation transporter/ATPase, N-terminus DN605_RS11675 PF01551 Peptidase family M23 DN605_RS11715 PF01381 Helix-turn-helix DN605_RS11725 PF03432 Relaxase/Mobilisation nuclease domain DN605_RS11770 PF00877 NlpC/P60 family DN605_RS11770 PF01476 LysM domain DN605_RS11790 PF01555 DNA methylase DN605_RS11830 PF08275 DNA primase catalytic core, N-terminal domain DN605_RS11830 PF01807 CHC2 zinc finger DN605_RS11835 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS11835 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS11835 PF03389 MobA/MobL family DN605_RS11845 PF03575 Peptidase family S51 DN605_RS11875 PF00753 Metallo-beta-lactamase superfamily DN605_RS11940 PF00872 Transposase, Mutator family DN605_RS12000 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS12000 PF03389 MobA/MobL family DN605_RS12000 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS12010 PF01381 Helix-turn-helix DN605_RS12040 PF03389 MobA/MobL family DN605_RS12040 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS12040 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS12105 PF00149 Calcineurin-like phosphoesterase DN605_RS12110 PF00155 Aminotransferase class I and II DN605_RS12120 PF00248 Aldo/keto reductase family DN605_RS12135 PF09186 Domain of unknown function (DUF1949) DN605_RS12135 PF01205 Uncharacterized protein family UPF0029 DN605_RS12140 PF02146 Sir2 family DN605_RS12150 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DN605_RS12165 PF07728 AAA domain (dynein-related subfamily) DN605_RS12165 PF08406 CbbQ/NirQ/NorQ C-terminal DN605_RS12175 PF00639 PPIC-type PPIASE domain DN605_RS12185 PF07724 AAA domain (Cdc48 subfamily) DN605_RS12185 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS12185 PF10431 C-terminal, D2-small domain, of ClpB protein DN605_RS12185 PF02861 Clp amino terminal domain, pathogenicity island component DN605_RS12185 PF17871 AAA lid domain DN605_RS12190 PF00011 Hsp20/alpha crystallin family DN605_RS12195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS12195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS12195 PF01842 ACT domain DN605_RS12200 PF02875 Mur ligase family, glutamate ligase domain DN605_RS12200 PF01225 Mur ligase family, catalytic domain DN605_RS12200 PF08245 Mur ligase middle domain DN605_RS12215 PF01180 Dihydroorotate dehydrogenase DN605_RS12220 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DN605_RS12235 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DN605_RS12240 PF01979 Amidohydrolase family DN605_RS12265 PF16360 GTP-binding GTPase Middle Region DN605_RS12265 PF01926 50S ribosome-binding GTPase DN605_RS12265 PF13167 GTP-binding GTPase N-terminal DN605_RS12275 PF01197 Ribosomal protein L31 DN605_RS12290 PF10458 Valyl tRNA synthetase tRNA binding arm DN605_RS12290 PF08264 Anticodon-binding domain of tRNA DN605_RS12290 PF00133 tRNA synthetases class I (I, L, M and V) DN605_RS12305 PF03816 Cell envelope-related transcriptional attenuator domain DN605_RS12310 PF01467 Cytidylyltransferase-like DN605_RS12320 PF01985 CRS1 / YhbY (CRM) domain DN605_RS12330 PF01725 Ham1 family DN605_RS12335 PF01138 3' exoribonuclease family, domain 1 DN605_RS12335 PF03725 3' exoribonuclease family, domain 2 DN605_RS12340 PF02881 SRP54-type protein, helical bundle domain DN605_RS12340 PF00448 SRP54-type protein, GTPase domain DN605_RS12360 PF02463 RecF/RecN/SMC N terminal domain DN605_RS12360 PF06470 SMC proteins Flexible Hinge Domain DN605_RS12370 PF00665 Integrase core domain DN605_RS12370 PF13333 Integrase core domain DN605_RS12375 PF10371 Domain of unknown function DN605_RS12375 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DN605_RS12375 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DN605_RS12375 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DN605_RS12375 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DN605_RS12380 PF13335 Magnesium chelatase, subunit ChlI C-terminal DN605_RS12380 PF01078 Magnesium chelatase, subunit ChlI DN605_RS12395 PF02568 Thiamine biosynthesis protein (ThiI) DN605_RS12395 PF02926 THUMP domain DN605_RS12400 PF02464 Competence-damaged protein DN605_RS12400 PF18146 Damage-inducible protein CinA KH domain DN605_RS12400 PF00994 Probable molybdopterin binding domain DN605_RS12405 PF02576 RimP N-terminal domain DN605_RS12405 PF17384 RimP C-terminal SH3 domain DN605_RS12410 PF00575 S1 RNA binding domain DN605_RS12410 PF13184 NusA-like KH domain DN605_RS12410 PF08529 NusA N-terminal domain DN605_RS12415 PF04296 Protein of unknown function (DUF448) DN605_RS12425 PF00009 Elongation factor Tu GTP binding domain DN605_RS12425 PF11987 Translation-initiation factor 2 DN605_RS12425 PF04760 Translation initiation factor IF-2, N-terminal region DN605_RS12435 PF02033 Ribosome-binding factor A DN605_RS12445 PF01509 TruB family pseudouridylate synthase (N terminal domain) DN605_RS12445 PF16198 tRNA pseudouridylate synthase B C-terminal domain DN605_RS12450 PF06574 FAD synthetase DN605_RS12450 PF01687 Riboflavin kinase DN605_RS12465 PF01098 Cell cycle protein DN605_RS12470 PF00905 Penicillin binding protein transpeptidase domain DN605_RS12470 PF03717 Penicillin-binding Protein dimerisation domain DN605_RS12485 PF13419 Haloacid dehalogenase-like hydrolase DN605_RS12490 PF02581 Thiamine monophosphate synthase DN605_RS12495 PF05525 Branched-chain amino acid transport protein DN605_RS12500 PF01230 HIT domain DN605_RS12510 PF05221 S-adenosyl-L-homocysteine hydrolase DN605_RS12510 PF00670 S-adenosyl-L-homocysteine hydrolase, NAD binding domain DN605_RS12515 PF00438 S-adenosylmethionine synthetase, N-terminal domain DN605_RS12515 PF02772 S-adenosylmethionine synthetase, central domain DN605_RS12515 PF02773 S-adenosylmethionine synthetase, C-terminal domain DN605_RS12520 PF01791 DeoC/LacD family aldolase DN605_RS12525 PF01594 AI-2E family transporter DN605_RS12535 PF03009 Glycerophosphoryl diester phosphodiesterase family DN605_RS12540 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN605_RS12540 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN605_RS12545 PF00696 Amino acid kinase family DN605_RS12550 PF01118 Semialdehyde dehydrogenase, NAD binding domain DN605_RS12555 PF14698 Argininosuccinate lyase C-terminal DN605_RS12555 PF00206 Lyase DN605_RS12560 PF00764 Arginosuccinate synthase DN605_RS12565 PF03616 Sodium/glutamate symporter DN605_RS12585 PF09546 Stage III sporulation protein AE (spore_III_AE) DN605_RS12595 PF06686 Stage III sporulation protein AC/AD protein family DN605_RS12625 PF05193 Peptidase M16 inactive domain DN605_RS12630 PF05193 Peptidase M16 inactive domain DN605_RS12630 PF00675 Insulinase (Peptidase family M16) DN605_RS12635 PF01790 Prolipoprotein diacylglyceryl transferase DN605_RS12640 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain DN605_RS12640 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain DN605_RS12650 PF00899 ThiF family DN605_RS12655 PF05690 Thiazole biosynthesis protein ThiG DN605_RS12665 PF02581 Thiamine monophosphate synthase DN605_RS12670 PF08543 Phosphomethylpyrimidine kinase DN605_RS12670 PF02581 Thiamine monophosphate synthase DN605_RS12675 PF01964 Radical SAM ThiC family DN605_RS12690 PF01070 FMN-dependent dehydrogenase DN605_RS12715 PF01869 BadF/BadG/BcrA/BcrD ATPase family DN605_RS12725 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN605_RS12725 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN605_RS12730 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DN605_RS12735 PF03477 ATP cone domain DN605_RS12735 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN605_RS12745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS12745 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS12745 PF00989 PAS fold DN605_RS12745 PF16736 Single Cache-like DN605_RS12750 PF00486 Transcriptional regulatory protein, C terminal DN605_RS12750 PF00072 Response regulator receiver domain DN605_RS12755 PF01895 PhoU domain DN605_RS12760 PF00005 ABC transporter DN605_RS12765 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS12770 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS12775 PF12849 PBP superfamily domain DN605_RS12780 PF04070 Domain of unknown function (DUF378) DN605_RS12785 PF03553 Na+/H+ antiporter family DN605_RS12805 PF00294 pfkB family carbohydrate kinase DN605_RS12810 PF01081 KDPG and KHG aldolase DN605_RS12815 PF01554 MatE DN605_RS12820 PF01979 Amidohydrolase family DN605_RS12825 PF03553 Na+/H+ antiporter family DN605_RS12830 PF01979 Amidohydrolase family DN605_RS12835 PF01177 Asp/Glu/Hydantoin racemase DN605_RS12840 PF07687 Peptidase dimerisation domain DN605_RS12840 PF01546 Peptidase family M20/M25/M40 DN605_RS12845 PF00155 Aminotransferase class I and II DN605_RS12885 PF00365 Phosphofructokinase DN605_RS12890 PF01430 Hsp33 protein DN605_RS12900 PF01371 Trp repressor protein DN605_RS12910 PF04463 Protein of unknown function (DUF523) DN605_RS12915 PF06135 IreB regulatory phosphoprotein DN605_RS12920 PF00579 tRNA synthetases class I (W and Y) DN605_RS12925 PF00953 Glycosyl transferase family 4 DN605_RS12930 PF02350 UDP-N-acetylglucosamine 2-epimerase DN605_RS12955 PF12850 Calcineurin-like phosphoesterase superfamily domain DN605_RS12960 PF13091 PLD-like domain DN605_RS12970 PF05636 HIGH Nucleotidyl Transferase DN605_RS12975 PF00871 Acetokinase family DN605_RS12995 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS12995 PF01842 ACT domain DN605_RS12995 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS13000 PF00266 Aminotransferase class-V DN605_RS13005 PF00392 Bacterial regulatory proteins, gntR family DN605_RS13010 PF00005 ABC transporter DN605_RS13010 PF13732 Domain of unknown function (DUF4162) DN605_RS13025 PF00665 Integrase core domain DN605_RS13025 PF13333 Integrase core domain DN605_RS13035 PF00365 Phosphofructokinase DN605_RS13060 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DN605_RS13060 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DN605_RS13065 PF02660 Glycerol-3-phosphate acyltransferase DN605_RS13070 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DN605_RS13070 PF01926 50S ribosome-binding GTPase DN605_RS13075 PF18509 Magnetochrome domain DN605_RS13075 PF17820 PDZ domain DN605_RS13085 PF00535 Glycosyl transferase family 2 DN605_RS13090 PF04138 GtrA-like protein DN605_RS13095 PF01381 Helix-turn-helix DN605_RS13105 PF01177 Asp/Glu/Hydantoin racemase DN605_RS13120 PF00672 HAMP domain DN605_RS13120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS13120 PF13426 PAS domain DN605_RS13120 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS13125 PF00072 Response regulator receiver domain DN605_RS13125 PF00486 Transcriptional regulatory protein, C terminal DN605_RS13130 PF00293 NUDIX domain DN605_RS13135 PF06949 Protein of unknown function (DUF1292) DN605_RS13165 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DN605_RS13170 PF00448 SRP54-type protein, GTPase domain DN605_RS13170 PF02881 SRP54-type protein, helical bundle domain DN605_RS13170 PF02978 Signal peptide binding domain DN605_RS13175 PF00886 Ribosomal protein S16 DN605_RS13185 PF01782 RimM N-terminal domain DN605_RS13185 PF05239 PRC-barrel domain DN605_RS13190 PF06397 Desulfoferrodoxin, N-terminal domain DN605_RS13190 PF01880 Desulfoferrodoxin DN605_RS13205 PF00919 Uncharacterized protein family UPF0004 DN605_RS13205 PF01938 TRAM domain DN605_RS13205 PF04055 Radical SAM superfamily DN605_RS13210 PF06107 Bacterial protein of unknown function (DUF951) DN605_RS13220 PF00072 Response regulator receiver domain DN605_RS13220 PF00486 Transcriptional regulatory protein, C terminal DN605_RS13225 PF05496 Holliday junction DNA helicase RuvB P-loop domain DN605_RS13225 PF12002 MgsA AAA+ ATPase C terminal DN605_RS13225 PF16193 AAA C-terminal domain DN605_RS13240 PF00730 HhH-GPD superfamily base excision DNA repair protein DN605_RS13240 PF00633 Helix-hairpin-helix motif DN605_RS13245 PF00464 Serine hydroxymethyltransferase DN605_RS13260 PF00005 ABC transporter DN605_RS13260 PF12704 MacB-like periplasmic core domain DN605_RS13260 PF02687 FtsX-like permease family DN605_RS13265 PF00005 ABC transporter DN605_RS13265 PF12704 MacB-like periplasmic core domain DN605_RS13265 PF02687 FtsX-like permease family DN605_RS13270 PF00395 S-layer homology domain DN605_RS13275 PF13847 Methyltransferase domain DN605_RS13280 PF00005 ABC transporter DN605_RS13295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS13295 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS13300 PF00144 Beta-lactamase DN605_RS13305 PF02954 Bacterial regulatory protein, Fis family DN605_RS13305 PF13426 PAS domain DN605_RS13305 PF00158 Sigma-54 interaction domain DN605_RS13325 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DN605_RS13325 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DN605_RS13355 PF00664 ABC transporter transmembrane region DN605_RS13355 PF00005 ABC transporter DN605_RS13360 PF00005 ABC transporter DN605_RS13360 PF08021 Siderophore-interacting FAD-binding domain DN605_RS13360 PF04954 Siderophore-interacting protein DN605_RS13360 PF00664 ABC transporter transmembrane region DN605_RS13365 PF00440 Bacterial regulatory proteins, tetR family DN605_RS13385 PF12833 Helix-turn-helix domain DN605_RS13385 PF12852 Cupin DN605_RS13395 PF02535 ZIP Zinc transporter DN605_RS13415 PF03432 Relaxase/Mobilisation nuclease domain DN605_RS13455 PF04055 Radical SAM superfamily DN605_RS13475 PF03432 Relaxase/Mobilisation nuclease domain DN605_RS13510 PF01807 CHC2 zinc finger DN605_RS13510 PF08275 DNA primase catalytic core, N-terminal domain DN605_RS13520 PF00872 Transposase, Mutator family DN605_RS13525 PF00149 Calcineurin-like phosphoesterase DN605_RS13575 PF00877 NlpC/P60 family DN605_RS13580 PF01555 DNA methylase DN605_RS13620 PF01695 IstB-like ATP binding protein DN605_RS13650 PF10706 Aminoglycoside-2''-adenylyltransferase DN605_RS13765 PF01695 IstB-like ATP binding protein DN605_RS13780 PF03389 MobA/MobL family DN605_RS13815 PF00005 ABC transporter DN605_RS13815 PF12848 ABC transporter DN605_RS13845 PF17841 BID domain of Bartonella effector protein (Bep) DN605_RS13845 PF03389 MobA/MobL family DN605_RS13845 PF01443 Viral (Superfamily 1) RNA helicase DN605_RS13855 PF14492 Elongation Factor G, domain II DN605_RS13855 PF00679 Elongation factor G C-terminus DN605_RS13855 PF00009 Elongation factor Tu GTP binding domain DN605_RS13855 PF03764 Elongation factor G, domain IV DN605_RS13890 PF07508 Recombinase DN605_RS13890 PF00239 Resolvase, N terminal domain DN605_RS13895 PF03764 Elongation factor G, domain IV DN605_RS13895 PF00679 Elongation factor G C-terminus DN605_RS13895 PF14492 Elongation Factor G, domain II DN605_RS13895 PF00009 Elongation factor Tu GTP binding domain DN605_RS13900 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS13900 PF01842 ACT domain DN605_RS13900 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS13950 PF01548 Transposase DN605_RS13950 PF02371 Transposase IS116/IS110/IS902 family DN605_RS13975 PF01165 Ribosomal protein S21 DN605_RS13980 PF13603 Leucyl-tRNA synthetase, Domain 2 DN605_RS13980 PF00133 tRNA synthetases class I (I, L, M and V) DN605_RS13980 PF09334 tRNA synthetases class I (M) DN605_RS13980 PF08264 Anticodon-binding domain of tRNA DN605_RS13985 PF02503 Polyphosphate kinase middle domain DN605_RS13985 PF13090 Polyphosphate kinase C-terminal domain 2 DN605_RS13985 PF17941 Polyphosphate kinase C-terminal domain 1 DN605_RS13985 PF13089 Polyphosphate kinase N-terminal domain DN605_RS14000 PF01554 MatE DN605_RS14005 PF03616 Sodium/glutamate symporter DN605_RS14020 PF01380 SIS domain DN605_RS14025 PF12464 Maltose acetyltransferase DN605_RS14025 PF14602 Hexapeptide repeat of succinyl-transferase DN605_RS14035 PF02833 DHHA2 domain DN605_RS14035 PF00571 CBS domain DN605_RS14035 PF01368 DHH family DN605_RS14035 PF07085 DRTGG domain DN605_RS14040 PF01202 Shikimate kinase DN605_RS14045 PF00270 DEAD/DEAH box helicase DN605_RS14045 PF00271 Helicase conserved C-terminal domain DN605_RS14050 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN605_RS14050 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN605_RS14060 PF17871 AAA lid domain DN605_RS14060 PF02861 Clp amino terminal domain, pathogenicity island component DN605_RS14060 PF10431 C-terminal, D2-small domain, of ClpB protein DN605_RS14060 PF07724 AAA domain (Cdc48 subfamily) DN605_RS14060 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS14075 PF01416 tRNA pseudouridine synthase DN605_RS14085 PF00072 Response regulator receiver domain DN605_RS14085 PF00486 Transcriptional regulatory protein, C terminal DN605_RS14090 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS14090 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS14090 PF00672 HAMP domain DN605_RS14095 PF01541 GIY-YIG catalytic domain DN605_RS14100 PF00829 Ribosomal prokaryotic L21 protein DN605_RS14110 PF01016 Ribosomal L27 protein DN605_RS14120 PF09269 Domain of unknown function (DUF1967) DN605_RS14120 PF01926 50S ribosome-binding GTPase DN605_RS14120 PF01018 GTP1/OBG DN605_RS14125 PF02901 Pyruvate formate lyase-like DN605_RS14125 PF01228 Glycine radical DN605_RS14130 PF04055 Radical SAM superfamily DN605_RS14135 PF01235 Sodium:alanine symporter family DN605_RS14140 PF07517 SecA DEAD-like domain DN605_RS14140 PF07516 SecA Wing and Scaffold domain DN605_RS14140 PF02810 SEC-C motif DN605_RS14140 PF01043 SecA preprotein cross-linking domain DN605_RS14150 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DN605_RS14150 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DN605_RS14160 PF05816 Toxic anion resistance protein (TelA) DN605_RS14170 PF00258 Flavodoxin DN605_RS14180 PF13291 ACT domain DN605_RS14180 PF00291 Pyridoxal-phosphate dependent enzyme DN605_RS14185 PF00834 Ribulose-phosphate 3 epimerase family DN605_RS14190 PF02132 RecR protein DN605_RS14190 PF13662 Toprim domain DN605_RS14195 PF06969 HemN C-terminal domain DN605_RS14195 PF04055 Radical SAM superfamily DN605_RS14200 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN605_RS14205 PF12706 Beta-lactamase superfamily domain DN605_RS14210 PF02590 Predicted SPOUT methyltransferase DN605_RS14215 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DN605_RS14215 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DN605_RS14215 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DN605_RS14215 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DN605_RS14220 PF03313 Serine dehydratase alpha chain DN605_RS14225 PF03477 ATP cone domain DN605_RS14225 PF13597 Anaerobic ribonucleoside-triphosphate reductase DN605_RS14230 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DN605_RS14230 PF02896 PEP-utilising enzyme, TIM barrel domain DN605_RS14230 PF00391 PEP-utilising enzyme, mobile domain DN605_RS14245 PF00009 Elongation factor Tu GTP binding domain DN605_RS14245 PF03144 Elongation factor Tu domain 2 DN605_RS14245 PF03143 Elongation factor Tu C-terminal domain DN605_RS14250 PF03144 Elongation factor Tu domain 2 DN605_RS14250 PF00009 Elongation factor Tu GTP binding domain DN605_RS14250 PF14492 Elongation Factor G, domain II DN605_RS14250 PF03764 Elongation factor G, domain IV DN605_RS14250 PF00679 Elongation factor G C-terminus DN605_RS14255 PF00177 Ribosomal protein S7p/S5e DN605_RS14260 PF00164 Ribosomal protein S12/S23 DN605_RS14265 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DN605_RS14280 PF13180 PDZ domain DN605_RS14285 PF01594 AI-2E family transporter DN605_RS14290 PF02645 Uncharacterised protein, DegV family COG1307 DN605_RS14295 PF05979 Bacterial protein of unknown function (DUF896) DN605_RS14300 PF17774 Putative RNA-binding domain in YlmH DN605_RS14300 PF01479 S4 domain DN605_RS14310 PF03176 MMPL family DN605_RS14335 PF00183 Hsp90 protein DN605_RS14340 PF07729 FCD domain DN605_RS14340 PF00392 Bacterial regulatory proteins, gntR family DN605_RS14345 PF00005 ABC transporter DN605_RS14370 PF01595 Cyclin M transmembrane N-terminal domain DN605_RS14370 PF03471 Transporter associated domain DN605_RS14370 PF00571 CBS domain DN605_RS14380 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DN605_RS14380 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DN605_RS14400 PF00271 Helicase conserved C-terminal domain DN605_RS14400 PF00270 DEAD/DEAH box helicase DN605_RS14410 PF12169 DNA polymerase III subunits gamma and tau domain III DN605_RS14415 PF02575 YbaB/EbfC DNA-binding family DN605_RS14435 PF04172 LrgB-like family DN605_RS14440 PF03788 LrgA family DN605_RS14445 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DN605_RS14445 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DN605_RS14450 PF00860 Permease family DN605_RS14475 PF13333 Integrase core domain DN605_RS14475 PF13276 HTH-like domain DN605_RS14475 PF00665 Integrase core domain DN605_RS14475 PF01527 Transposase DN605_RS14480 PF03600 Citrate transporter DN605_RS14485 PF06857 Malonate decarboxylase delta subunit (MdcD) DN605_RS14490 PF03328 HpcH/HpaI aldolase/citrate lyase family DN605_RS14495 PF04223 Citrate lyase, alpha subunit (CitF) DN605_RS14500 PF08218 Citrate lyase ligase C-terminal domain DN605_RS14505 PF01874 ATP:dephospho-CoA triphosphoribosyl transferase DN605_RS14505 PF03802 Apo-citrate lyase phosphoribosyl-dephospho-CoA transferase DN605_RS14510 PF01255 Putative undecaprenyl diphosphate synthase DN605_RS14515 PF01170 Putative RNA methylase family UPF0020 DN605_RS14515 PF10672 S-adenosylmethionine-dependent methyltransferase DN605_RS14515 PF02926 THUMP domain DN605_RS14520 PF00005 ABC transporter DN605_RS14525 PF00005 ABC transporter DN605_RS14530 PF02361 Cobalt transport protein DN605_RS14555 PF02887 Pyruvate kinase, alpha/beta domain DN605_RS14555 PF00224 Pyruvate kinase, barrel domain DN605_RS14555 PF00391 PEP-utilising enzyme, mobile domain DN605_RS14575 PF09285 Elongation factor P, C-terminal DN605_RS14575 PF08207 Elongation factor P (EF-P) KOW-like domain DN605_RS14575 PF01132 Elongation factor P (EF-P) OB domain DN605_RS14580 PF00557 Metallopeptidase family M24 DN605_RS14580 PF01321 Creatinase/Prolidase N-terminal domain DN605_RS14590 PF01261 Xylose isomerase-like TIM barrel DN605_RS14610 PF00209 Sodium:neurotransmitter symporter family DN605_RS14640 PF00471 Ribosomal protein L33 DN605_RS14645 PF00584 SecE/Sec61-gamma subunits of protein translocation complex DN605_RS14650 PF02357 Transcription termination factor nusG DN605_RS14650 PF00467 KOW motif DN605_RS14655 PF00298 Ribosomal protein L11, RNA binding domain DN605_RS14655 PF03946 Ribosomal protein L11, N-terminal domain DN605_RS14660 PF00687 Ribosomal protein L1p/L10e family DN605_RS14665 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DN605_RS14665 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DN605_RS14665 PF13187 4Fe-4S dicluster domain DN605_RS14695 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN605_RS14695 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN605_RS14705 PF01554 MatE DN605_RS14710 PF00999 Sodium/hydrogen exchanger family DN605_RS14710 PF03471 Transporter associated domain DN605_RS14710 PF02080 TrkA-C domain DN605_RS14715 PF06153 Cyclic-di-AMP receptor DN605_RS14720 PF08281 Sigma-70, region 4 DN605_RS14720 PF04542 Sigma-70 region 2 DN605_RS14735 PF02659 Putative manganese efflux pump DN605_RS14750 PF07670 Nucleoside recognition DN605_RS14750 PF02421 Ferrous iron transport protein B DN605_RS14750 PF17910 FeoB cytosolic helical domain DN605_RS14750 PF04023 FeoA domain DN605_RS14750 PF07664 Ferrous iron transport protein B C terminus DN605_RS14775 PF01076 Plasmid recombination enzyme DN605_RS14795 PF00145 C-5 cytosine-specific DNA methylase DN605_RS14830 PF00877 NlpC/P60 family DN605_RS14830 PF01476 LysM domain DN605_RS14845 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN605_RS14855 PF14535 AMP-binding enzyme C-terminal domain DN605_RS14855 PF00501 AMP-binding enzyme DN605_RS14860 PF02537 CrcB-like protein, Camphor Resistance (CrcB) DN605_RS14875 PF01371 Trp repressor protein DN605_RS14880 PF13193 AMP-binding enzyme C-terminal domain DN605_RS14880 PF00501 AMP-binding enzyme DN605_RS14885 PF03616 Sodium/glutamate symporter DN605_RS14890 PF02540 NAD synthase DN605_RS14890 PF00795 Carbon-nitrogen hydrolase DN605_RS14905 PF08497 Radical SAM N-terminal DN605_RS14905 PF04055 Radical SAM superfamily DN605_RS14905 PF11842 Domain of unknown function (DUF3362) DN605_RS14910 PF00155 Aminotransferase class I and II DN605_RS14915 PF00391 PEP-utilising enzyme, mobile domain DN605_RS14915 PF02896 PEP-utilising enzyme, TIM barrel domain DN605_RS14915 PF05524 PEP-utilising enzyme, N-terminal DN605_RS14920 PF00871 Acetokinase family DN605_RS14925 PF01515 Phosphate acetyl/butaryl transferase DN605_RS14930 PF00474 Sodium:solute symporter family DN605_RS14955 PF01183 Glycosyl hydrolases family 25 DN605_RS14995 PF04204 Homoserine O-succinyltransferase DN605_RS15000 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DN605_RS15015 PF03418 Germination protease DN605_RS15020 PF01649 Ribosomal protein S20 DN605_RS15025 PF03631 Virulence factor BrkB DN605_RS15030 PF01042 Endoribonuclease L-PSP DN605_RS15035 PF03840 Preprotein translocase SecG subunit DN605_RS15040 PF13419 Haloacid dehalogenase-like hydrolase DN605_RS15060 PF13291 ACT domain DN605_RS15060 PF00291 Pyridoxal-phosphate dependent enzyme DN605_RS15065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN605_RS15070 PF00085 Thioredoxin DN605_RS15075 PF07722 Peptidase C26 DN605_RS15085 PF02441 Flavoprotein DN605_RS15090 PF02607 B12 binding domain DN605_RS15090 PF02310 B12 binding domain DN605_RS15090 PF00809 Pterin binding enzyme DN605_RS15090 PF02574 Homocysteine S-methyltransferase DN605_RS15090 PF02965 Vitamin B12 dependent methionine synthase, activation domain DN605_RS15100 PF02219 Methylenetetrahydrofolate reductase DN605_RS15110 PF03372 Endonuclease/Exonuclease/phosphatase family DN605_RS15115 PF03590 Aspartate-ammonia ligase DN605_RS15160 PF00091 Tubulin/FtsZ family, GTPase domain DN605_RS15160 PF12327 FtsZ family, C-terminal domain DN605_RS15170 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN605_RS15175 PF04101 Glycosyltransferase family 28 C-terminal domain DN605_RS15175 PF03033 Glycosyltransferase family 28 N-terminal domain DN605_RS15180 PF01098 Cell cycle protein DN605_RS15185 PF00953 Glycosyl transferase family 4 DN605_RS15185 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 DN605_RS15190 PF08245 Mur ligase middle domain DN605_RS15190 PF01225 Mur ligase family, catalytic domain DN605_RS15190 PF02875 Mur ligase family, glutamate ligase domain DN605_RS15195 PF03717 Penicillin-binding Protein dimerisation domain DN605_RS15195 PF03793 PASTA domain DN605_RS15195 PF00905 Penicillin binding protein transpeptidase domain DN605_RS15205 PF01795 MraW methylase family DN605_RS15210 PF02381 MraZ protein, putative antitoxin-like DN605_RS15215 PF03167 Uracil DNA glycosylase superfamily DN605_RS15225 PF00696 Amino acid kinase family DN605_RS15225 PF13840 ACT domain DN605_RS15230 PF01842 ACT domain DN605_RS15230 PF03447 Homoserine dehydrogenase, NAD binding domain DN605_RS15230 PF00742 Homoserine dehydrogenase DN605_RS15235 PF01842 ACT domain DN605_RS15240 PF00905 Penicillin binding protein transpeptidase domain DN605_RS15240 PF00912 Transglycosylase DN605_RS15250 PF07739 TipAS antibiotic-recognition domain DN605_RS15250 PF13411 MerR HTH family regulatory protein DN605_RS15255 PF03883 Peroxide stress protein YaaA DN605_RS15260 PF00578 AhpC/TSA family DN605_RS15270 PF00580 UvrD/REP helicase N-terminal domain DN605_RS15270 PF13361 UvrD-like helicase C-terminal domain DN605_RS15275 PF17674 HHH domain DN605_RS15275 PF00575 S1 RNA binding domain DN605_RS15275 PF09371 Tex-like protein N-terminal domain DN605_RS15275 PF16921 Tex protein YqgF-like domain DN605_RS15290 PF02915 Rubrerythrin DN605_RS15295 PF04998 RNA polymerase Rpb1, domain 5 DN605_RS15295 PF00623 RNA polymerase Rpb1, domain 2 DN605_RS15295 PF05000 RNA polymerase Rpb1, domain 4 DN605_RS15295 PF04983 RNA polymerase Rpb1, domain 3 DN605_RS15295 PF04997 RNA polymerase Rpb1, domain 1 DN605_RS15300 PF04563 RNA polymerase beta subunit DN605_RS15300 PF04560 RNA polymerase Rpb2, domain 7 DN605_RS15300 PF00562 RNA polymerase Rpb2, domain 6 DN605_RS15300 PF04565 RNA polymerase Rpb2, domain 3 DN605_RS15300 PF04561 RNA polymerase Rpb2, domain 2 DN605_RS15300 PF10385 RNA polymerase beta subunit external 1 domain DN605_RS15310 PF03309 Type III pantothenate kinase DN605_RS15315 PF12822 ECF transporter, substrate-specific component DN605_RS15320 PF02441 Flavoprotein DN605_RS15320 PF04127 DNA / pantothenate metabolism flavoprotein DN605_RS15325 PF00453 Ribosomal protein L20 DN605_RS15330 PF01632 Ribosomal protein L35 DN605_RS15335 PF00707 Translation initiation factor IF-3, C-terminal domain DN605_RS15335 PF05198 Translation initiation factor IF-3, N-terminal domain DN605_RS15340 PF00814 Glycoprotease family DN605_RS15345 PF01418 Helix-turn-helix domain, rpiR family DN605_RS15345 PF01380 SIS domain DN605_RS15355 PF00155 Aminotransferase class I and II DN605_RS15360 PF03737 Aldolase/RraA DN605_RS15375 PF01367 5'-3' exonuclease, C-terminal SAM fold DN605_RS15375 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DN605_RS15375 PF00476 DNA polymerase family A DN605_RS15380 PF02525 Flavodoxin-like fold DN605_RS15385 PF00224 Pyruvate kinase, barrel domain DN605_RS15385 PF02887 Pyruvate kinase, alpha/beta domain DN605_RS15395 PF02645 Uncharacterised protein, DegV family COG1307 DN605_RS15410 PF01783 Ribosomal L32p protein family DN605_RS15420 PF00849 RNA pseudouridylate synthase DN605_RS15420 PF01479 S4 domain DN605_RS15425 PF08402 TOBE domain DN605_RS15425 PF00005 ABC transporter DN605_RS15430 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS15435 PF00528 Binding-protein-dependent transport system inner membrane component DN605_RS15445 PF00766 Electron transfer flavoprotein FAD-binding domain DN605_RS15445 PF01012 Electron transfer flavoprotein domain DN605_RS15450 PF01012 Electron transfer flavoprotein domain DN605_RS15455 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DN605_RS15455 PF02770 Acyl-CoA dehydrogenase, middle domain DN605_RS15455 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DN605_RS15460 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DN605_RS15460 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DN605_RS15465 PF02368 Bacterial Ig-like domain (group 2) DN605_RS15465 PF00754 F5/8 type C domain DN605_RS15470 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS15470 PF17866 AAA lid domain DN605_RS15475 PF00919 Uncharacterized protein family UPF0004 DN605_RS15475 PF01938 TRAM domain DN605_RS15475 PF04055 Radical SAM superfamily DN605_RS15495 PF00378 Enoyl-CoA hydratase/isomerase DN605_RS15505 PF00542 Ribosomal protein L7/L12 C-terminal domain DN605_RS15505 PF16320 Ribosomal protein L7/L12 dimerisation domain DN605_RS15510 PF00466 Ribosomal protein L10 DN605_RS15520 PF02554 Carbon starvation protein CstA DN605_RS15525 PF03808 Glycosyl transferase WecB/TagA/CpsF family DN605_RS15530 PF02223 Thymidylate kinase DN605_RS15535 PF01965 DJ-1/PfpI family DN605_RS15540 PF01812 5-formyltetrahydrofolate cyclo-ligase family DN605_RS15550 PF02618 YceG-like family DN605_RS15555 PF01136 Peptidase family U32 DN605_RS15555 PF16325 Peptidase family U32 C-terminal domain DN605_RS15560 PF01554 MatE DN605_RS15610 PF00999 Sodium/hydrogen exchanger family DN605_RS15615 PF02390 Putative methyltransferase DN605_RS15650 PF00589 Phage integrase family DN605_RS15650 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS15655 PF00589 Phage integrase family DN605_RS15655 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS15680 PF00639 PPIC-type PPIASE domain DN605_RS15680 PF09312 SurA N-terminal domain DN605_RS15705 PF00581 Rhodanese-like domain DN605_RS15715 PF04480 Protein of unknown function (DUF559) DN605_RS15715 PF03852 DNA mismatch endonuclease Vsr DN605_RS15725 PF00176 SNF2 family N-terminal domain DN605_RS15725 PF00271 Helicase conserved C-terminal domain DN605_RS15735 PF00145 C-5 cytosine-specific DNA methylase DN605_RS15770 PF00589 Phage integrase family DN605_RS15770 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS15805 PF00581 Rhodanese-like domain DN605_RS15840 PF00266 Aminotransferase class-V DN605_RS15865 PF00270 DEAD/DEAH box helicase DN605_RS15865 PF16124 RecQ zinc-binding DN605_RS15865 PF00570 HRDC domain DN605_RS15865 PF00271 Helicase conserved C-terminal domain DN605_RS15865 PF09382 RQC domain DN605_RS15870 PF18339 RapA N-terminal Tudor like domain 1 DN605_RS15870 PF00176 SNF2 family N-terminal domain DN605_RS15870 PF18337 RapA N-terminal Tudor like domain DN605_RS15870 PF00271 Helicase conserved C-terminal domain DN605_RS15870 PF12137 RNA polymerase recycling family C-terminal DN605_RS15880 PF13361 UvrD-like helicase C-terminal domain DN605_RS15880 PF00580 UvrD/REP helicase N-terminal domain DN605_RS15895 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS15895 PF00589 Phage integrase family DN605_RS15930 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DN605_RS15930 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DN605_RS15940 PF03006 Haemolysin-III related DN605_RS15945 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS15945 PF10431 C-terminal, D2-small domain, of ClpB protein DN605_RS15945 PF07724 AAA domain (Cdc48 subfamily) DN605_RS15945 PF17871 AAA lid domain DN605_RS15945 PF02861 Clp amino terminal domain, pathogenicity island component DN605_RS15950 PF12838 4Fe-4S dicluster domain DN605_RS15960 PF02446 4-alpha-glucanotransferase DN605_RS15965 PF06480 FtsH Extracellular DN605_RS15965 PF01434 Peptidase family M41 DN605_RS15965 PF17862 AAA+ lid domain DN605_RS15965 PF00004 ATPase family associated with various cellular activities (AAA) DN605_RS15970 PF00588 SpoU rRNA Methylase family DN605_RS15970 PF08032 RNA 2'-O ribose methyltransferase substrate binding DN605_RS15990 PF02386 Cation transport protein DN605_RS15995 PF02254 TrkA-N domain DN605_RS15995 PF02080 TrkA-C domain DN605_RS16000 PF01906 Putative heavy-metal-binding DN605_RS16040 PF00571 CBS domain DN605_RS16050 PF03275 UDP-galactopyranose mutase DN605_RS16055 PF00535 Glycosyl transferase family 2 DN605_RS16060 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN605_RS16060 PF09180 Prolyl-tRNA synthetase, C-terminal DN605_RS16060 PF03129 Anticodon binding domain DN605_RS16070 PF01022 Bacterial regulatory protein, arsR family DN605_RS16085 PF00440 Bacterial regulatory proteins, tetR family DN605_RS16090 PF05977 Transmembrane secretion effector DN605_RS16125 PF00472 RF-1 domain DN605_RS16125 PF03462 PCRF domain DN605_RS16130 PF00072 Response regulator receiver domain DN605_RS16130 PF00486 Transcriptional regulatory protein, C terminal DN605_RS16135 PF02702 Osmosensitive K+ channel His kinase sensor domain DN605_RS16135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS16135 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS16135 PF13493 Domain of unknown function (DUF4118) DN605_RS16160 PF16868 NMT1-like family DN605_RS16165 PF04545 Sigma-70, region 4 DN605_RS16165 PF04542 Sigma-70 region 2 DN605_RS16170 PF02796 Helix-turn-helix domain of resolvase DN605_RS16170 PF00239 Resolvase, N terminal domain DN605_RS16190 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN605_RS16190 PF14490 Helix-hairpin-helix containing domain DN605_RS16190 PF13538 UvrD-like helicase C-terminal domain DN605_RS16240 PF11799 impB/mucB/samB family C-terminal domain DN605_RS16240 PF00817 impB/mucB/samB family DN605_RS16270 PF00239 Resolvase, N terminal domain DN605_RS16270 PF02796 Helix-turn-helix domain of resolvase DN605_RS16285 PF01381 Helix-turn-helix DN605_RS16395 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DN605_RS16395 PF04101 Glycosyltransferase family 28 C-terminal domain DN605_RS16405 PF01594 AI-2E family transporter DN605_RS16425 PF02275 Linear amide C-N hydrolases, choloylglycine hydrolase family DN605_RS16430 PF00872 Transposase, Mutator family DN605_RS16450 PF01743 Poly A polymerase head domain DN605_RS16450 PF12627 Probable RNA and SrmB- binding site of polymerase A DN605_RS16450 PF13735 tRNA nucleotidyltransferase domain 2 putative DN605_RS16455 PF10127 RNA repair pathway DNA polymerase beta family DN605_RS16460 PF01139 tRNA-splicing ligase RtcB DN605_RS16510 PF01420 Type I restriction modification DNA specificity domain DN605_RS16520 PF02899 Phage integrase, N-terminal SAM-like domain DN605_RS16520 PF00589 Phage integrase family DN605_RS16525 PF01420 Type I restriction modification DNA specificity domain DN605_RS16530 PF02384 N-6 DNA Methylase DN605_RS16530 PF12161 HsdM N-terminal domain DN605_RS16535 PF00271 Helicase conserved C-terminal domain DN605_RS16535 PF08463 EcoEI R protein C-terminal DN605_RS16535 PF13588 Type I restriction enzyme R protein N terminus (HSDR_N) DN605_RS16535 PF04851 Type III restriction enzyme, res subunit DN605_RS16570 PF01336 OB-fold nucleic acid binding domain DN605_RS16570 PF01966 HD domain DN605_RS16765 PF13811 Domain of unknown function (DUF4186) DN605_RS16780 PF01661 Macro domain DN605_RS16795 PF07804 HipA-like C-terminal domain DN605_RS16940 PF01613 Flavin reductase like domain DN605_RS16945 PF01638 HxlR-like helix-turn-helix DN605_RS16950 PF01047 MarR family DN605_RS16990 PF09856 Predicted transcriptional regulator (DUF2083) DN605_RS16990 PF06114 IrrE N-terminal-like domain DN605_RS16990 PF01381 Helix-turn-helix DN605_RS17000 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS17000 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS17005 PF17853 GGDEF-like domain DN605_RS17005 PF05651 Putative sugar diacid recognition DN605_RS17005 PF13556 PucR C-terminal helix-turn-helix domain DN605_RS17010 PF05161 MOFRL family DN605_RS17010 PF13660 Domain of unknown function (DUF4147) DN605_RS17015 PF07687 Peptidase dimerisation domain DN605_RS17015 PF01546 Peptidase family M20/M25/M40 DN605_RS17030 PF03169 OPT oligopeptide transporter protein DN605_RS17060 PF00113 Enolase, C-terminal TIM barrel domain DN605_RS17060 PF03952 Enolase, N-terminal domain DN605_RS17065 PF06415 BPG-independent PGAM N-terminus (iPGM_N) DN605_RS17065 PF01676 Metalloenzyme superfamily DN605_RS17070 PF00121 Triosephosphate isomerase DN605_RS17075 PF00162 Phosphoglycerate kinase DN605_RS17080 PF00588 SpoU rRNA Methylase family DN605_RS17095 PF01554 MatE DN605_RS17100 PF03448 MgtE intracellular N domain DN605_RS17100 PF01769 Divalent cation transporter DN605_RS17100 PF00571 CBS domain DN605_RS17105 PF00849 RNA pseudouridylate synthase DN605_RS17110 PF02779 Transketolase, pyrimidine binding domain DN605_RS17110 PF13292 1-deoxy-D-xylulose-5-phosphate synthase DN605_RS17110 PF02780 Transketolase, C-terminal domain DN605_RS17115 PF00456 Transketolase, thiamine diphosphate binding domain DN605_RS17120 PF03764 Elongation factor G, domain IV DN605_RS17120 PF03144 Elongation factor Tu domain 2 DN605_RS17120 PF00009 Elongation factor Tu GTP binding domain DN605_RS17120 PF00679 Elongation factor G C-terminus DN605_RS17120 PF14492 Elongation Factor G, domain II DN605_RS17155 PF08281 Sigma-70, region 4 DN605_RS17155 PF04542 Sigma-70 region 2 DN605_RS17165 PF13735 tRNA nucleotidyltransferase domain 2 putative DN605_RS17165 PF12627 Probable RNA and SrmB- binding site of polymerase A DN605_RS17165 PF01743 Poly A polymerase head domain DN605_RS17185 PF00403 Heavy-metal-associated domain DN605_RS17190 PF00665 Integrase core domain DN605_RS17190 PF13276 HTH-like domain DN605_RS17190 PF13333 Integrase core domain DN605_RS17200 PF00149 Calcineurin-like phosphoesterase DN605_RS17240 PF00589 Phage integrase family DN605_RS17240 PF14659 Phage integrase, N-terminal SAM-like domain DN605_RS17310 PF01048 Phosphorylase superfamily DN605_RS17325 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN605_RS17325 PF02824 TGS domain DN605_RS17325 PF03129 Anticodon binding domain DN605_RS17325 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DN605_RS17330 PF03471 Transporter associated domain DN605_RS17330 PF00571 CBS domain DN605_RS17330 PF01595 Cyclin M transmembrane N-terminal domain DN605_RS17340 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN605_RS17340 PF00753 Metallo-beta-lactamase superfamily DN605_RS17340 PF10996 Beta-Casp domain DN605_RS17375 PF07687 Peptidase dimerisation domain DN605_RS17375 PF01546 Peptidase family M20/M25/M40 DN605_RS17380 PF01726 LexA DNA binding domain DN605_RS17380 PF00717 Peptidase S24-like DN605_RS17390 PF00664 ABC transporter transmembrane region DN605_RS17390 PF00005 ABC transporter DN605_RS17395 PF00005 ABC transporter DN605_RS17395 PF00664 ABC transporter transmembrane region DN605_RS17405 PF03062 MBOAT, membrane-bound O-acyltransferase family DN605_RS17420 PF13333 Integrase core domain DN605_RS17420 PF00665 Integrase core domain DN605_RS17435 PF01207 Dihydrouridine synthase (Dus) DN605_RS17440 PF07992 Pyridine nucleotide-disulphide oxidoreductase DN605_RS17445 PF01084 Ribosomal protein S18 DN605_RS17450 PF00436 Single-strand binding protein family DN605_RS17455 PF01250 Ribosomal protein S6 DN605_RS17465 PF00749 tRNA synthetases class I (E and Q), catalytic domain DN605_RS17470 PF01235 Sodium:alanine symporter family DN605_RS17480 PF00005 ABC transporter DN605_RS17490 PF01032 FecCD transport family DN605_RS17495 PF00005 ABC transporter DN605_RS17505 PF00111 2Fe-2S iron-sulfur cluster binding domain DN605_RS17505 PF01799 [2Fe-2S] binding domain DN605_RS17510 PF01799 [2Fe-2S] binding domain DN605_RS17510 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DN605_RS17510 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DN605_RS17515 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase DN605_RS17520 PF00005 ABC transporter DN605_RS17525 PF01032 FecCD transport family DN605_RS17540 PF06180 Cobalt chelatase (CbiK) DN605_RS17545 PF18152 DAHP synthase ferredoxin-like domain DN605_RS17545 PF00793 DAHP synthetase I family DN605_RS17550 PF02153 Prephenate dehydrogenase DN605_RS17555 PF01761 3-dehydroquinate synthase DN605_RS17560 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DN605_RS17565 PF01264 Chorismate synthase DN605_RS17570 PF01817 Chorismate mutase type II DN605_RS17570 PF00800 Prephenate dehydratase DN605_RS17575 PF08501 Shikimate dehydrogenase substrate binding domain DN605_RS17575 PF01488 Shikimate / quinate 5-dehydrogenase DN605_RS17575 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DN605_RS17580 PF01220 Dehydroquinase class II DN605_RS17595 PF00690 Cation transporter/ATPase, N-terminus DN605_RS17595 PF00689 Cation transporting ATPase, C-terminus DN605_RS17620 PF05167 Uncharacterised ACR (DUF711) DN605_RS17625 PF03444 Winged helix-turn-helix transcription repressor, HrcA DNA-binding DN605_RS17625 PF01628 HrcA protein C terminal domain DN605_RS17630 PF01025 GrpE DN605_RS17635 PF00012 Hsp70 protein DN605_RS17640 PF01556 DnaJ C terminal domain DN605_RS17640 PF00684 DnaJ central domain DN605_RS17640 PF00226 DnaJ domain DN605_RS17645 PF00753 Metallo-beta-lactamase superfamily DN605_RS17645 PF17770 Ribonuclease J C-terminal domain DN605_RS17645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DN605_RS17660 PF00486 Transcriptional regulatory protein, C terminal DN605_RS17660 PF00072 Response regulator receiver domain DN605_RS17665 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS17665 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS17670 PF14815 NUDIX domain DN605_RS17670 PF00730 HhH-GPD superfamily base excision DNA repair protein DN605_RS17675 PF01872 RibD C-terminal domain DN605_RS17685 PF00270 DEAD/DEAH box helicase DN605_RS17685 PF17191 RecG wedge domain DN605_RS17685 PF00271 Helicase conserved C-terminal domain DN605_RS17795 PF00768 D-alanyl-D-alanine carboxypeptidase DN605_RS17795 PF07943 Penicillin-binding protein 5, C-terminal domain DN605_RS17800 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DN605_RS17800 PF02806 Alpha amylase, C-terminal all-beta domain DN605_RS17800 PF00128 Alpha amylase, catalytic domain DN605_RS17805 PF00132 Bacterial transferase hexapeptide (six repeats) DN605_RS17805 PF00483 Nucleotidyl transferase DN605_RS17810 PF00483 Nucleotidyl transferase DN605_RS17815 PF00534 Glycosyl transferases group 1 DN605_RS17815 PF08323 Starch synthase catalytic domain DN605_RS17820 PF00343 Carbohydrate phosphorylase DN605_RS17825 PF02502 Ribose/Galactose Isomerase DN605_RS17830 PF03606 C4-dicarboxylate anaerobic carrier DN605_RS17835 PF01979 Amidohydrolase family DN605_RS17840 PF03606 C4-dicarboxylate anaerobic carrier DN605_RS17850 PF01522 Polysaccharide deacetylase DN605_RS17855 PF01235 Sodium:alanine symporter family DN605_RS17870 PF06808 Tripartite ATP-independent periplasmic transporter, DctM component DN605_RS17880 PF03480 Bacterial extracellular solute-binding protein, family 7 DN605_RS17885 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DN605_RS17885 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DN605_RS17890 PF01791 DeoC/LacD family aldolase DN605_RS17895 PF00107 Zinc-binding dehydrogenase DN605_RS17895 PF08240 Alcohol dehydrogenase GroES-like domain DN605_RS17900 PF01380 SIS domain DN605_RS17900 PF01418 Helix-turn-helix domain, rpiR family DN605_RS17905 PF06827 Zinc finger found in FPG and IleRS DN605_RS17905 PF08264 Anticodon-binding domain of tRNA DN605_RS17905 PF00133 tRNA synthetases class I (I, L, M and V) DN605_RS17915 PF02690 Na+/Pi-cotransporter DN605_RS17920 PF00005 ABC transporter DN605_RS17920 PF12848 ABC transporter DN605_RS17955 PF10609 NUBPL iron-transfer P-loop NTPase DN605_RS17960 PF00905 Penicillin binding protein transpeptidase domain DN605_RS17960 PF03717 Penicillin-binding Protein dimerisation domain DN605_RS17975 PF02545 Maf-like protein DN605_RS17985 PF00692 dUTPase DN605_RS17990 PF01136 Peptidase family U32 DN605_RS17990 PF12392 Collagenase DN605_RS17995 PF05164 Cell division protein ZapA DN605_RS18000 PF03749 Sugar fermentation stimulation protein RE domain DN605_RS18000 PF17746 SfsA N-terminal OB domain DN605_RS18025 PF11258 Protein of unknown function (DUF3048) N-terminal domain DN605_RS18025 PF17479 Protein of unknown function (DUF3048) C-terminal domain DN605_RS18030 PF01614 Bacterial transcriptional regulator DN605_RS18030 PF09339 IclR helix-turn-helix domain DN605_RS18035 PF01081 KDPG and KHG aldolase DN605_RS18040 PF00294 pfkB family carbohydrate kinase DN605_RS18055 PF02001 Protein of unknown function DUF134 DN605_RS18070 PF01544 CorA-like Mg2+ transporter protein DN605_RS18075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DN605_RS18075 PF00512 His Kinase A (phospho-acceptor) domain DN605_RS18080 PF00072 Response regulator receiver domain DN605_RS18080 PF00486 Transcriptional regulatory protein, C terminal DN605_RS18090 PF02371 Transposase IS116/IS110/IS902 family DN605_RS18090 PF01548 Transposase DN605_RS18110 PF12804 MobA-like NTP transferase domain DN605_RS18110 PF00132 Bacterial transferase hexapeptide (six repeats) DN605_RS18125 PF10502 Signal peptidase, peptidase S26 DN605_RS18135 PF00149 Calcineurin-like phosphoesterase DN605_RS18140 PF13277 YmdB-like protein DN605_RS18145 PF08486 Stage II sporulation protein DN605_RS18160 PF00156 Phosphoribosyl transferase domain DN605_RS18165 PF04002 RadC-like JAB domain DN605_RS18170 PF00271 Helicase conserved C-terminal domain DN605_RS18170 PF04851 Type III restriction enzyme, res subunit DN605_RS18170 PF02151 UvrB/uvrC motif DN605_RS18170 PF12344 Ultra-violet resistance protein B DN605_RS18170 PF17757 UvrB interaction domain DN605_RS18185 PF04073 Aminoacyl-tRNA editing domain DN605_RS18200 PF00583 Acetyltransferase (GNAT) family DN605_RS18210 PF17755 UvrA DNA-binding domain DN605_RS18210 PF17760 UvrA interaction domain DN605_RS18220 PF01381 Helix-turn-helix DN605_RS18240 PF14490 Helix-hairpin-helix containing domain DN605_RS18240 PF13538 UvrD-like helicase C-terminal domain DN605_RS18240 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DN605_RS18250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS18250 PF03466 LysR substrate binding domain DN605_RS18255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS18255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS18255 PF01842 ACT domain DN605_RS18260 PF03737 Aldolase/RraA DN605_RS18275 PF02080 TrkA-C domain DN605_RS18275 PF03600 Citrate transporter DN605_RS18285 PF00395 S-layer homology domain DN605_RS18285 PF00331 Glycosyl hydrolase family 10 DN605_RS18285 PF02018 Carbohydrate binding domain DN605_RS18285 PF06452 Carbohydrate family 9 binding domain-like DN605_RS18295 PF00118 TCP-1/cpn60 chaperonin family DN605_RS18300 PF00166 Chaperonin 10 Kd subunit DN605_RS18305 PF01170 Putative RNA methylase family UPF0020 DN605_RS18305 PF02926 THUMP domain DN605_RS18315 PF01145 SPFH domain / Band 7 family DN605_RS18335 PF01522 Polysaccharide deacetylase DN605_RS18340 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DN605_RS18340 PF03466 LysR substrate binding domain DN605_RS18345 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DN605_RS18345 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DN605_RS18405 PF03323 Bacillus/Clostridium GerA spore germination protein DN605_RS18430 PF08903 Domain of unknown function (DUF1846) DN605_RS18435 PF01925 Sulfite exporter TauE/SafE DN605_RS18440 PF14437 MafB19-like deaminase DN605_RS18445 PF00270 DEAD/DEAH box helicase DN605_RS18445 PF02559 CarD-like/TRCF domain DN605_RS18445 PF00271 Helicase conserved C-terminal domain DN605_RS18445 PF03461 TRCF domain DN605_RS18445 PF17757 UvrB interaction domain DN605_RS18455 PF02803 Thiolase, C-terminal domain DN605_RS18455 PF00108 Thiolase, N-terminal domain DN605_RS18460 PF00013 KH domain DN605_RS18460 PF01138 3' exoribonuclease family, domain 1 DN605_RS18460 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain DN605_RS18460 PF03725 3' exoribonuclease family, domain 2 DN605_RS18460 PF00575 S1 RNA binding domain DN605_RS18465 PF00312 Ribosomal protein S15 DN605_RS18480 PF02734 DAK2 domain DN605_RS18480 PF13684 Dihydroxyacetone kinase family DN605_RS18490 PF02653 Branched-chain amino acid transport system / permease component DN605_RS18495 PF02653 Branched-chain amino acid transport system / permease component DN605_RS18500 PF00005 ABC transporter DN605_RS18510 PF00156 Phosphoribosyl transferase domain DN605_RS18515 PF00375 Sodium:dicarboxylate symporter family DN605_RS18520 PF17762 HTH domain found in ParB protein DN605_RS18520 PF02195 ParB-like nuclease domain DN605_RS18525 PF13614 AAA domain DN605_RS18530 PF17762 HTH domain found in ParB protein DN605_RS18530 PF02195 ParB-like nuclease domain DN605_RS18540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DN605_RS18540 PF02403 Seryl-tRNA synthetase N-terminal domain DN605_RS18550 PF01741 Large-conductance mechanosensitive channel, MscL DN605_RS18560 PF02527 rRNA small subunit methyltransferase G DN605_RS18565 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DN605_RS18570 PF02142 MGS-like domain DN605_RS18575 PF03129 Anticodon binding domain DN605_RS18575 PF13393 Histidyl-tRNA synthetase DN605_RS18590 PF02938 GAD domain DN605_RS18590 PF01336 OB-fold nucleic acid binding domain DN605_RS18590 PF00152 tRNA synthetases class II (D, K and N) DN605_RS18595 PF00933 Glycosyl hydrolase family 3 N terminal domain DN605_RS18605 PF04468 PSP1 C-terminal conserved region DN605_RS18610 PF12169 DNA polymerase III subunits gamma and tau domain III DN605_RS18615 PF01276 Orn/Lys/Arg decarboxylase, major domain DN605_RS18615 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DN605_RS18620 PF01424 R3H domain DN605_RS18620 PF14804 Jag N-terminus DN605_RS18625 PF02096 60Kd inner membrane protein DN605_RS18625 PF14849 YidC periplasmic domain DN605_RS18630 PF01809 Putative membrane protein insertion efficiency factor DN605_RS18635 PF00825 Ribonuclease P DN605_RS18640 PF00468 Ribosomal protein L34