locus-tag class description C3348_RS00005 PF00308 Bacterial dnaA protein C3348_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix C3348_RS00005 PF11638 DnaA N-terminal domain C3348_RS00010 PF02767 DNA polymerase III beta subunit, central domain C3348_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain C3348_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain C3348_RS00020 PF02463 RecF/RecN/SMC N terminal domain C3348_RS00025 PF00204 DNA gyrase B C3348_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus C3348_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS00025 PF01751 Toprim domain C3348_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A C3348_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller C3348_RS00045 PF01740 STAS domain C3348_RS00050 PF13581 Histidine kinase-like ATPase domain C3348_RS00055 PF04545 Sigma-70, region 4 C3348_RS00055 PF04539 Sigma-70 region 3 C3348_RS00055 PF04542 Sigma-70 region 2 C3348_RS00105 PF08279 HTH domain C3348_RS00105 PF02829 3H domain C3348_RS00110 PF05552 Conserved TM helix C3348_RS00110 PF00924 Mechanosensitive ion channel C3348_RS00115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3348_RS00115 PF02403 Seryl-tRNA synthetase N-terminal domain C3348_RS00120 PF14437 MafB19-like deaminase C3348_RS00135 PF12169 DNA polymerase III subunits gamma and tau domain III C3348_RS00140 PF02575 YbaB/EbfC DNA-binding family C3348_RS00145 PF13662 Toprim domain C3348_RS00145 PF02132 RecR protein C3348_RS00155 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C3348_RS00155 PF00534 Glycosyl transferases group 1 C3348_RS00395 PF00682 HMGL-like C3348_RS00395 PF02436 Conserved carboxylase domain C3348_RS00395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3348_RS00395 PF00364 Biotin-requiring enzyme C3348_RS00395 PF00289 Biotin carboxylase, N-terminal domain C3348_RS00395 PF02785 Biotin carboxylase C-terminal domain C3348_RS00400 PF00009 Elongation factor Tu GTP binding domain C3348_RS00400 PF03764 Elongation factor G, domain IV C3348_RS00400 PF14492 Elongation Factor G, domain II C3348_RS00400 PF03144 Elongation factor Tu domain 2 C3348_RS00400 PF00679 Elongation factor G C-terminus C3348_RS00405 PF17727 CtsR C-terminal dimerization domain C3348_RS00405 PF05848 CtsR N-terminal HTH domain C3348_RS00410 PF02151 UvrB/uvrC motif C3348_RS00415 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain C3348_RS00420 PF10431 C-terminal, D2-small domain, of ClpB protein C3348_RS00420 PF02861 Clp amino terminal domain, pathogenicity island component C3348_RS00420 PF17871 AAA lid domain C3348_RS00420 PF07724 AAA domain (Cdc48 subfamily) C3348_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS00425 PF18073 Rubredoxin metal binding domain C3348_RS00430 PF10635 DisA bacterial checkpoint controller linker region C3348_RS00430 PF02457 DisA bacterial checkpoint controller nucleotide-binding C3348_RS00455 PF04616 Glycosyl hydrolases family 43 C3348_RS00455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain C3348_RS00465 PF04198 Putative sugar-binding domain C3348_RS00470 PF00676 Dehydrogenase E1 component C3348_RS00475 PF02779 Transketolase, pyrimidine binding domain C3348_RS00475 PF02780 Transketolase, C-terminal domain C3348_RS00480 PF02817 e3 binding domain C3348_RS00480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) C3348_RS00480 PF00364 Biotin-requiring enzyme C3348_RS00485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3348_RS00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS00490 PF00158 Sigma-54 interaction domain C3348_RS00490 PF03610 PTS system fructose IIA component C3348_RS00490 PF00874 PRD domain C3348_RS00500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS00505 PF03611 PTS system sugar-specific permease component C3348_RS00515 PF00596 Class II Aldolase and Adducin N-terminal domain C3348_RS00520 PF03099 Biotin/lipoate A/B protein ligase family C3348_RS00520 PF10437 Bacterial lipoate protein ligase C-terminus C3348_RS00525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase C3348_RS00530 PF02542 YgbB family C3348_RS00535 PF03129 Anticodon binding domain C3348_RS00535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3348_RS00535 PF04073 Aminoacyl-tRNA editing domain C3348_RS00540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3348_RS00540 PF09180 Prolyl-tRNA synthetase, C-terminal C3348_RS00540 PF03129 Anticodon binding domain C3348_RS00545 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3348_RS00555 PF01406 tRNA synthetases class I (C) catalytic domain C3348_RS00555 PF09190 DALR domain C3348_RS00560 PF00636 Ribonuclease III domain C3348_RS00570 PF00303 Thymidylate synthase C3348_RS00575 PF00186 Dihydrofolate reductase C3348_RS00585 PF01964 Radical SAM ThiC family C3348_RS00590 PF02511 Thymidylate synthase complementing protein C3348_RS00595 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3348_RS00595 PF00588 SpoU rRNA Methylase family C3348_RS00600 PF05991 YacP-like NYN domain C3348_RS00605 PF08281 Sigma-70, region 4 C3348_RS00605 PF04542 Sigma-70 region 2 C3348_RS00610 PF03143 Elongation factor Tu C-terminal domain C3348_RS00610 PF03144 Elongation factor Tu domain 2 C3348_RS00610 PF00009 Elongation factor Tu GTP binding domain C3348_RS00615 PF00471 Ribosomal protein L33 C3348_RS00625 PF00467 KOW motif C3348_RS00625 PF02357 Transcription termination factor nusG C3348_RS00630 PF03946 Ribosomal protein L11, N-terminal domain C3348_RS00630 PF00298 Ribosomal protein L11, RNA binding domain C3348_RS00635 PF00687 Ribosomal protein L1p/L10e family C3348_RS00640 PF00466 Ribosomal protein L10 C3348_RS00645 PF16320 Ribosomal protein L7/L12 dimerisation domain C3348_RS00645 PF00542 Ribosomal protein L7/L12 C-terminal domain C3348_RS00655 PF00562 RNA polymerase Rpb2, domain 6 C3348_RS00655 PF04561 RNA polymerase Rpb2, domain 2 C3348_RS00655 PF04565 RNA polymerase Rpb2, domain 3 C3348_RS00655 PF04560 RNA polymerase Rpb2, domain 7 C3348_RS00655 PF10385 RNA polymerase beta subunit external 1 domain C3348_RS00655 PF04563 RNA polymerase beta subunit C3348_RS00660 PF04997 RNA polymerase Rpb1, domain 1 C3348_RS00660 PF05000 RNA polymerase Rpb1, domain 4 C3348_RS00660 PF00623 RNA polymerase Rpb1, domain 2 C3348_RS00660 PF04983 RNA polymerase Rpb1, domain 3 C3348_RS00660 PF04998 RNA polymerase Rpb1, domain 5 C3348_RS00665 PF00164 Ribosomal protein S12/S23 C3348_RS00670 PF00177 Ribosomal protein S7p/S5e C3348_RS00675 PF14492 Elongation Factor G, domain II C3348_RS00675 PF00009 Elongation factor Tu GTP binding domain C3348_RS00675 PF03764 Elongation factor G, domain IV C3348_RS00675 PF03144 Elongation factor Tu domain 2 C3348_RS00675 PF00679 Elongation factor G C-terminus C3348_RS00680 PF00009 Elongation factor Tu GTP binding domain C3348_RS00680 PF03144 Elongation factor Tu domain 2 C3348_RS00680 PF03143 Elongation factor Tu C-terminal domain C3348_RS00685 PF00338 Ribosomal protein S10p/S20e C3348_RS00690 PF00297 Ribosomal protein L3 C3348_RS00695 PF00573 Ribosomal protein L4/L1 family C3348_RS00700 PF00276 Ribosomal protein L23 C3348_RS00705 PF03947 Ribosomal Proteins L2, C-terminal domain C3348_RS00705 PF00181 Ribosomal Proteins L2, RNA binding domain C3348_RS00710 PF00203 Ribosomal protein S19 C3348_RS00715 PF00237 Ribosomal protein L22p/L17e C3348_RS00720 PF00189 Ribosomal protein S3, C-terminal domain C3348_RS00720 PF07650 KH domain C3348_RS00725 PF00252 Ribosomal protein L16p/L10e C3348_RS00730 PF00831 Ribosomal L29 protein C3348_RS00735 PF00366 Ribosomal protein S17 C3348_RS00740 PF00238 Ribosomal protein L14p/L23e C3348_RS00745 PF00467 KOW motif C3348_RS00745 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 C3348_RS00750 PF00673 ribosomal L5P family C-terminus C3348_RS00750 PF00281 Ribosomal protein L5 C3348_RS00755 PF00253 Ribosomal protein S14p/S29e C3348_RS00760 PF00410 Ribosomal protein S8 C3348_RS00765 PF00347 Ribosomal protein L6 C3348_RS00770 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast C3348_RS00775 PF03719 Ribosomal protein S5, C-terminal domain C3348_RS00775 PF00333 Ribosomal protein S5, N-terminal domain C3348_RS00780 PF00327 Ribosomal protein L30p/L7e C3348_RS00785 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A C3348_RS00790 PF00344 SecY translocase C3348_RS00795 PF05191 Adenylate kinase, active site lid C3348_RS00800 PF00557 Metallopeptidase family M24 C3348_RS00810 PF01176 Translation initiation factor 1A / IF-1 C3348_RS00815 PF00444 Ribosomal protein L36 C3348_RS00820 PF00416 Ribosomal protein S13/S18 C3348_RS00825 PF00411 Ribosomal protein S11 C3348_RS00830 PF01479 S4 domain C3348_RS00830 PF00163 Ribosomal protein S4/S9 N-terminal domain C3348_RS00835 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain C3348_RS00835 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain C3348_RS00835 PF01000 RNA polymerase Rpb3/RpoA insert domain C3348_RS00840 PF01196 Ribosomal protein L17 C3348_RS00845 PF00005 ABC transporter C3348_RS00850 PF00005 ABC transporter C3348_RS00855 PF02361 Cobalt transport protein C3348_RS00860 PF01416 tRNA pseudouridine synthase C3348_RS00865 PF00572 Ribosomal protein L13 C3348_RS00870 PF00380 Ribosomal protein S9/S16 C3348_RS00875 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS01010 PF00155 Aminotransferase class I and II C3348_RS01015 PF03477 ATP cone domain C3348_RS01015 PF13597 Anaerobic ribonucleoside-triphosphate reductase C3348_RS01020 PF04055 Radical SAM superfamily C3348_RS01120 PF02457 DisA bacterial checkpoint controller nucleotide-binding C3348_RS01135 PF01515 Phosphate acetyl/butaryl transferase C3348_RS01140 PF00871 Acetokinase family C3348_RS01170 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3348_RS01170 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3348_RS01170 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3348_RS01170 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3348_RS01175 PF01380 SIS domain C3348_RS01180 PF00581 Rhodanese-like domain C3348_RS01190 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3348_RS01195 PF08486 Stage II sporulation protein C3348_RS01205 PF12116 Stage III sporulation protein D C3348_RS01215 PF07977 FabA-like domain C3348_RS01220 PF06866 Protein of unknown function (DUF1256) C3348_RS01225 PF02772 S-adenosylmethionine synthetase, central domain C3348_RS01225 PF02773 S-adenosylmethionine synthetase, C-terminal domain C3348_RS01225 PF00438 S-adenosylmethionine synthetase, N-terminal domain C3348_RS01235 PF14490 Helix-hairpin-helix containing domain C3348_RS01235 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain C3348_RS01235 PF13538 UvrD-like helicase C-terminal domain C3348_RS01245 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS01245 PF08279 HTH domain C3348_RS01245 PF05043 Mga helix-turn-helix domain C3348_RS01245 PF00874 PRD domain C3348_RS01250 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3348_RS01255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS01260 PF02378 Phosphotransferase system, EIIC C3348_RS01270 PF01112 Asparaginase C3348_RS01275 PF01546 Peptidase family M20/M25/M40 C3348_RS01280 PF03932 CutC family C3348_RS01285 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C3348_RS01285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3348_RS01290 PF07516 SecA Wing and Scaffold domain C3348_RS01290 PF02810 SEC-C motif C3348_RS01290 PF01043 SecA preprotein cross-linking domain C3348_RS01290 PF07517 SecA DEAD-like domain C3348_RS01295 PF00472 RF-1 domain C3348_RS01295 PF03462 PCRF domain C3348_RS01300 PF17674 HHH domain C3348_RS01300 PF00575 S1 RNA binding domain C3348_RS01300 PF09371 Tex-like protein N-terminal domain C3348_RS01300 PF16921 Tex protein YqgF-like domain C3348_RS01305 PF01979 Amidohydrolase family C3348_RS01320 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE C3348_RS01325 PF00814 Glycoprotease family C3348_RS01330 PF00583 Acetyltransferase (GNAT) family C3348_RS01335 PF00814 Glycoprotease family C3348_RS01340 PF02901 Pyruvate formate lyase-like C3348_RS01340 PF01228 Glycine radical C3348_RS01345 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal C3348_RS01345 PF18524 High potential iron-sulfur protein like C3348_RS01350 PF04055 Radical SAM superfamily C3348_RS01370 PF04397 LytTr DNA-binding domain C3348_RS01370 PF00072 Response regulator receiver domain C3348_RS01375 PF00005 ABC transporter C3348_RS01405 PF13520 Amino acid permease C3348_RS01410 PF01546 Peptidase family M20/M25/M40 C3348_RS01410 PF07687 Peptidase dimerisation domain C3348_RS01415 PF00158 Sigma-54 interaction domain C3348_RS01415 PF13426 PAS domain C3348_RS01415 PF02954 Bacterial regulatory protein, Fis family C3348_RS01430 PF01554 MatE C3348_RS01435 PF12848 ABC transporter C3348_RS01435 PF00005 ABC transporter C3348_RS01435 PF16326 ABC transporter C-terminal domain C3348_RS01440 PF06971 Putative DNA-binding protein N-terminus C3348_RS01440 PF02629 CoA binding domain C3348_RS01450 PF12838 4Fe-4S dicluster domain C3348_RS01460 PF03063 Prismane/CO dehydrogenase family C3348_RS01470 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS01485 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain C3348_RS01485 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase C3348_RS01490 PF05569 BlaR1 peptidase M56 C3348_RS01490 PF00905 Penicillin binding protein transpeptidase domain C3348_RS01505 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain C3348_RS01505 PF00877 NlpC/P60 family C3348_RS01510 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3348_RS01510 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3348_RS01515 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C3348_RS01520 PF01180 Dihydroorotate dehydrogenase C3348_RS01525 PF00156 Phosphoribosyl transferase domain C3348_RS01530 PF02558 Ketopantoate reductase PanE/ApbA C3348_RS01530 PF08546 Ketopantoate reductase PanE/ApbA C terminal C3348_RS01535 PF03466 LysR substrate binding domain C3348_RS01535 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS01540 PF03601 Conserved hypothetical protein 698 C3348_RS01550 PF13396 Phospholipase_D-nuclease N-terminal C3348_RS01550 PF13091 PLD-like domain C3348_RS01555 PF00166 Chaperonin 10 Kd subunit C3348_RS01560 PF00118 TCP-1/cpn60 chaperonin family C3348_RS01565 PF00731 AIR carboxylase C3348_RS01570 PF01969 Protein of unknown function DUF111 C3348_RS01575 PF01969 Protein of unknown function DUF111 C3348_RS01580 PF02540 NAD synthase C3348_RS01580 PF00958 GMP synthase C terminal domain C3348_RS01580 PF00117 Glutamine amidotransferase class-I C3348_RS01595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS01615 PF00005 ABC transporter C3348_RS01615 PF17755 UvrA DNA-binding domain C3348_RS01615 PF17760 UvrA interaction domain C3348_RS01620 PF00563 EAL domain C3348_RS01620 PF00196 Bacterial regulatory proteins, luxR family C3348_RS01640 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS01650 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS01665 PF00881 Nitroreductase family C3348_RS01670 PF00731 AIR carboxylase C3348_RS01675 PF01259 SAICAR synthetase C3348_RS01680 PF00156 Phosphoribosyl transferase domain C3348_RS01685 PF02769 AIR synthase related protein, C-terminal domain C3348_RS01685 PF00586 AIR synthase related protein, N-terminal domain C3348_RS01690 PF00551 Formyl transferase C3348_RS01695 PF01808 AICARFT/IMPCHase bienzyme C3348_RS01695 PF02142 MGS-like domain C3348_RS01700 PF02843 Phosphoribosylglycinamide synthetase, C domain C3348_RS01700 PF02844 Phosphoribosylglycinamide synthetase, N domain C3348_RS01700 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain C3348_RS01705 PF02769 AIR synthase related protein, C-terminal domain C3348_RS01705 PF00586 AIR synthase related protein, N-terminal domain C3348_RS01705 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain C3348_RS01710 PF04321 RmlD substrate binding domain C3348_RS01715 PF00483 Nucleotidyl transferase C3348_RS01720 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase C3348_RS01725 PF16363 GDP-mannose 4,6 dehydratase C3348_RS01730 PF01464 Transglycosylase SLT domain C3348_RS01740 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3348_RS01765 PF02623 FliW protein C3348_RS01770 PF02599 Global regulator protein family C3348_RS01785 PF02465 Flagellar hook-associated protein 2 N-terminus C3348_RS01785 PF07195 Flagellar hook-associated protein 2 C-terminus C3348_RS01795 PF00669 Bacterial flagellin N-terminal helical region C3348_RS01795 PF00700 Bacterial flagellin C-terminal helical region C3348_RS01800 PF00535 Glycosyl transferase family 2 C3348_RS01805 PF00535 Glycosyl transferase family 2 C3348_RS01820 PF01820 D-ala D-ala ligase N-terminus C3348_RS01820 PF07478 D-ala D-ala ligase C-terminus C3348_RS01830 PF05523 WxcM-like, C-terminal C3348_RS01835 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family C3348_RS01840 PF00460 Flagella basal body rod protein C3348_RS01840 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3348_RS01845 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3348_RS01845 PF00460 Flagella basal body rod protein C3348_RS01850 PF02049 Flagellar hook-basal body complex protein FliE C3348_RS01855 PF01514 Secretory protein of YscJ/FliF family C3348_RS01855 PF08345 Flagellar M-ring protein C-terminal C3348_RS01860 PF01706 FliG C-terminal domain C3348_RS01860 PF14842 FliG N-terminal domain C3348_RS01860 PF14841 FliG middle domain C3348_RS01870 PF18269 T3SS EscN ATPase C-terminal domain C3348_RS01870 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3348_RS01870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3348_RS01885 PF03963 Flagellar hook capping protein - N-terminal region C3348_RS01890 PF00460 Flagella basal body rod protein C3348_RS01890 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3348_RS01900 PF01618 MotA/TolQ/ExbB proton channel family C3348_RS01905 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3348_RS01905 PF00691 OmpA family C3348_RS01920 PF00813 FliP family C3348_RS01925 PF01313 Bacterial export proteins, family 3 C3348_RS01930 PF01312 FlhB HrpN YscU SpaS Family C3348_RS01935 PF00771 FHIPEP family C3348_RS01940 PF00448 SRP54-type protein, GTPase domain C3348_RS01945 PF10609 NUBPL iron-transfer P-loop NTPase C3348_RS01950 PF04539 Sigma-70 region 3 C3348_RS01950 PF04545 Sigma-70, region 4 C3348_RS01950 PF04542 Sigma-70 region 2 C3348_RS01965 PF00460 Flagella basal body rod protein C3348_RS01965 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3348_RS01970 PF06429 Flagellar basal body rod FlgEFG protein C-terminal C3348_RS01970 PF00460 Flagella basal body rod protein C3348_RS01980 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term C3348_RS01980 PF04509 CheC-like family C3348_RS01990 PF00183 Hsp90 protein C3348_RS01995 PF00465 Iron-containing alcohol dehydrogenase C3348_RS02000 PF04055 Radical SAM superfamily C3348_RS02005 PF12833 Helix-turn-helix domain C3348_RS02015 PF01638 HxlR-like helix-turn-helix C3348_RS02035 PF03610 PTS system fructose IIA component C3348_RS02035 PF00874 PRD domain C3348_RS02035 PF00158 Sigma-54 interaction domain C3348_RS02040 PF00874 PRD domain C3348_RS02040 PF03610 PTS system fructose IIA component C3348_RS02040 PF00158 Sigma-54 interaction domain C3348_RS02055 PF03830 PTS system sorbose subfamily IIB component C3348_RS02060 PF03609 PTS system sorbose-specific iic component C3348_RS02065 PF03613 PTS system mannose/fructose/sorbose family IID component C3348_RS02075 PF01546 Peptidase family M20/M25/M40 C3348_RS02080 PF01381 Helix-turn-helix C3348_RS02085 PF13396 Phospholipase_D-nuclease N-terminal C3348_RS02090 PF13732 Domain of unknown function (DUF4162) C3348_RS02090 PF00005 ABC transporter C3348_RS02110 PF04055 Radical SAM superfamily C3348_RS02110 PF06968 Biotin and Thiamin Synthesis associated domain C3348_RS02115 PF00356 Bacterial regulatory proteins, lacI family C3348_RS02120 PF00294 pfkB family carbohydrate kinase C3348_RS02125 PF13407 Periplasmic binding protein domain C3348_RS02130 PF00005 ABC transporter C3348_RS02135 PF02653 Branched-chain amino acid transport system / permease component C3348_RS02140 PF07687 Peptidase dimerisation domain C3348_RS02140 PF01546 Peptidase family M20/M25/M40 C3348_RS02150 PF01546 Peptidase family M20/M25/M40 C3348_RS02205 PF01022 Bacterial regulatory protein, arsR family C3348_RS02210 PF00403 Heavy-metal-associated domain C3348_RS02230 PF09335 SNARE associated Golgi protein C3348_RS02250 PF00005 ABC transporter C3348_RS02260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02260 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS02265 PF00072 Response regulator receiver domain C3348_RS02265 PF00486 Transcriptional regulatory protein, C terminal C3348_RS02285 PF01891 Cobalt uptake substrate-specific transmembrane region C3348_RS02290 PF02553 Cobalt transport protein component CbiN C3348_RS02295 PF02361 Cobalt transport protein C3348_RS02300 PF00005 ABC transporter C3348_RS02305 PF13361 UvrD-like helicase C-terminal domain C3348_RS02305 PF00580 UvrD/REP helicase N-terminal domain C3348_RS02310 PF02127 Aminopeptidase I zinc metalloprotease (M18) C3348_RS02320 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD C3348_RS02340 PF00571 CBS domain C3348_RS02340 PF02833 DHHA2 domain C3348_RS02340 PF07085 DRTGG domain C3348_RS02340 PF01368 DHH family C3348_RS02345 PF00171 Aldehyde dehydrogenase family C3348_RS02345 PF00465 Iron-containing alcohol dehydrogenase C3348_RS02355 PF00005 ABC transporter C3348_RS02365 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain C3348_RS02365 PF17203 Single cache domain 3 C3348_RS02365 PF00989 PAS fold C3348_RS02365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02370 PF04397 LytTr DNA-binding domain C3348_RS02370 PF00072 Response regulator receiver domain C3348_RS02395 PF16123 Hydroxyacylglutathione hydrolase C-terminus C3348_RS02395 PF00753 Metallo-beta-lactamase superfamily C3348_RS02400 PF04607 Region found in RelA / SpoT proteins C3348_RS02445 PF00367 phosphotransferase system, EIIB C3348_RS02445 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS02445 PF02378 Phosphotransferase system, EIIC C3348_RS02450 PF00232 Glycosyl hydrolase family 1 C3348_RS02455 PF00874 PRD domain C3348_RS02455 PF03123 CAT RNA binding domain C3348_RS02465 PF00733 Asparagine synthase C3348_RS02465 PF13537 Glutamine amidotransferase domain C3348_RS02480 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3348_RS02480 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3348_RS02485 PF02515 CoA-transferase family III C3348_RS02490 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3348_RS02495 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C3348_RS02500 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C3348_RS02505 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3348_RS02505 PF02770 Acyl-CoA dehydrogenase, middle domain C3348_RS02505 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3348_RS02510 PF01012 Electron transfer flavoprotein domain C3348_RS02515 PF01012 Electron transfer flavoprotein domain C3348_RS02515 PF00766 Electron transfer flavoprotein FAD-binding domain C3348_RS02515 PF13237 4Fe-4S dicluster domain C3348_RS02520 PF00158 Sigma-54 interaction domain C3348_RS02520 PF13188 PAS domain C3348_RS02520 PF02954 Bacterial regulatory protein, Fis family C3348_RS02525 PF01116 Fructose-bisphosphate aldolase class-II C3348_RS02545 PF12323 Helix-turn-helix domain C3348_RS02545 PF01385 Probable transposase C3348_RS02545 PF07282 Putative transposase DNA-binding domain C3348_RS02555 PF05958 tRNA (Uracil-5-)-methyltransferase C3348_RS02580 PF00665 Integrase core domain C3348_RS02580 PF13333 Integrase core domain C3348_RS02595 PF02954 Bacterial regulatory protein, Fis family C3348_RS02595 PF13426 PAS domain C3348_RS02595 PF00158 Sigma-54 interaction domain C3348_RS02610 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS02615 PF16552 D-ornithine 4,5-aminomutase alpha-subunit C3348_RS02620 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase C3348_RS02620 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit C3348_RS02620 PF02310 B12 binding domain C3348_RS02625 PF13941 MutL protein C3348_RS02630 PF01168 Alanine racemase, N-terminal domain C3348_RS02635 PF03553 Na+/H+ antiporter family C3348_RS02650 PF12833 Helix-turn-helix domain C3348_RS02655 PF13538 UvrD-like helicase C-terminal domain C3348_RS02660 PF17760 UvrA interaction domain C3348_RS02660 PF17755 UvrA DNA-binding domain C3348_RS02660 PF00005 ABC transporter C3348_RS02670 PF00905 Penicillin binding protein transpeptidase domain C3348_RS02675 PF00005 ABC transporter C3348_RS02685 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS02685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02685 PF00989 PAS fold C3348_RS02690 PF00072 Response regulator receiver domain C3348_RS02690 PF00486 Transcriptional regulatory protein, C terminal C3348_RS02720 PF00753 Metallo-beta-lactamase superfamily C3348_RS02730 PF01380 SIS domain C3348_RS02730 PF01418 Helix-turn-helix domain, rpiR family C3348_RS02745 PF00128 Alpha amylase, catalytic domain C3348_RS02750 PF00367 phosphotransferase system, EIIB C3348_RS02750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS02750 PF02378 Phosphotransferase system, EIIC C3348_RS02755 PF00905 Penicillin binding protein transpeptidase domain C3348_RS02755 PF05569 BlaR1 peptidase M56 C3348_RS02760 PF03965 Penicillinase repressor C3348_RS02765 PF03358 NADPH-dependent FMN reductase C3348_RS02795 PF00005 ABC transporter C3348_RS02810 PF00072 Response regulator receiver domain C3348_RS02810 PF00486 Transcriptional regulatory protein, C terminal C3348_RS02815 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS02815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02815 PF13426 PAS domain C3348_RS02815 PF00672 HAMP domain C3348_RS02825 PF00005 ABC transporter C3348_RS02825 PF02687 FtsX-like permease family C3348_RS02825 PF12704 MacB-like periplasmic core domain C3348_RS02830 PF01066 CDP-alcohol phosphatidyltransferase C3348_RS02835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02835 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS02840 PF00486 Transcriptional regulatory protein, C terminal C3348_RS02840 PF00072 Response regulator receiver domain C3348_RS02845 PF00795 Carbon-nitrogen hydrolase C3348_RS02850 PF00893 Small Multidrug Resistance protein C3348_RS02855 PF01259 SAICAR synthetase C3348_RS02860 PF00107 Zinc-binding dehydrogenase C3348_RS02860 PF08240 Alcohol dehydrogenase GroES-like domain C3348_RS02870 PF03830 PTS system sorbose subfamily IIB component C3348_RS02880 PF03613 PTS system mannose/fructose/sorbose family IID component C3348_RS02885 PF00486 Transcriptional regulatory protein, C terminal C3348_RS02885 PF00072 Response regulator receiver domain C3348_RS02890 PF00989 PAS fold C3348_RS02890 PF18698 Histidine kinase sensor domain C3348_RS02890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02890 PF00672 HAMP domain C3348_RS02890 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS02900 PF07943 Penicillin-binding protein 5, C-terminal domain C3348_RS02900 PF00768 D-alanyl-D-alanine carboxypeptidase C3348_RS02905 PF00158 Sigma-54 interaction domain C3348_RS02905 PF00874 PRD domain C3348_RS02905 PF03610 PTS system fructose IIA component C3348_RS02925 PF13493 Domain of unknown function (DUF4118) C3348_RS02925 PF02702 Osmosensitive K+ channel His kinase sensor domain C3348_RS02925 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS02925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS02930 PF00072 Response regulator receiver domain C3348_RS02930 PF00486 Transcriptional regulatory protein, C terminal C3348_RS02940 PF03707 Bacterial signalling protein N terminal repeat C3348_RS02940 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS02940 PF00563 EAL domain C3348_RS02950 PF07687 Peptidase dimerisation domain C3348_RS02950 PF01546 Peptidase family M20/M25/M40 C3348_RS02955 PF03806 AbgT putative transporter family C3348_RS02980 PF13280 WYL domain C3348_RS02980 PF08279 HTH domain C3348_RS02990 PF00072 Response regulator receiver domain C3348_RS02995 PF04509 CheC-like family C3348_RS03000 PF03975 CheD chemotactic sensory transduction C3348_RS03005 PF01584 CheW-like domain C3348_RS03010 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS03010 PF00072 Response regulator receiver domain C3348_RS03015 PF02203 Tar ligand binding domain homologue C3348_RS03015 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain C3348_RS03015 PF00672 HAMP domain C3348_RS03020 PF01627 Hpt domain C3348_RS03020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS03020 PF07194 P2 response regulator binding domain C3348_RS03020 PF02895 Signal transducing histidine kinase, homodimeric domain C3348_RS03020 PF01584 CheW-like domain C3348_RS03025 PF01584 CheW-like domain C3348_RS03030 PF03705 CheR methyltransferase, all-alpha domain C3348_RS03030 PF01739 CheR methyltransferase, SAM binding domain C3348_RS03035 PF01339 CheB methylesterase C3348_RS03035 PF00072 Response regulator receiver domain C3348_RS03045 PF02423 Ornithine cyclodeaminase/mu-crystallin family C3348_RS03060 PF03965 Penicillinase repressor C3348_RS03065 PF05569 BlaR1 peptidase M56 C3348_RS03065 PF00905 Penicillin binding protein transpeptidase domain C3348_RS03085 PF13367 PrsW family intramembrane metalloprotease C3348_RS03090 PF17126 RsmF rRNA methyltransferase first C-terminal domain C3348_RS03090 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF C3348_RS03090 PF01189 16S rRNA methyltransferase RsmB/F C3348_RS03095 PF10502 Signal peptidase, peptidase S26 C3348_RS03100 PF10502 Signal peptidase, peptidase S26 C3348_RS03110 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3348_RS03110 PF03129 Anticodon binding domain C3348_RS03110 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3348_RS03115 PF04960 Glutaminase C3348_RS03125 PF01261 Xylose isomerase-like TIM barrel C3348_RS03145 PF08331 Domain of unknown function (DUF1730) C3348_RS03150 PF13654 AAA domain C3348_RS03150 PF05362 Lon protease (S16) C-terminal proteolytic domain C3348_RS03155 PF10576 Iron-sulfur binding domain of endonuclease III C3348_RS03155 PF00633 Helix-hairpin-helix motif C3348_RS03155 PF00730 HhH-GPD superfamily base excision DNA repair protein C3348_RS03160 PF00588 SpoU rRNA Methylase family C3348_RS03165 PF02645 Uncharacterised protein, DegV family COG1307 C3348_RS03170 PF02608 ABC transporter substrate-binding protein PnrA-like C3348_RS03175 PF02608 ABC transporter substrate-binding protein PnrA-like C3348_RS03190 PF04286 Protein of unknown function (DUF445) C3348_RS03195 PF03129 Anticodon binding domain C3348_RS03195 PF02824 TGS domain C3348_RS03195 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3348_RS03195 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3348_RS03215 PF01385 Probable transposase C3348_RS03215 PF07282 Putative transposase DNA-binding domain C3348_RS03215 PF12323 Helix-turn-helix domain C3348_RS03240 PF03551 Transcriptional regulator PadR-like family C3348_RS03270 PF00171 Aldehyde dehydrogenase family C3348_RS03275 PF00440 Bacterial regulatory proteins, tetR family C3348_RS03275 PF17932 Tetracyclin repressor-like, C-terminal domain C3348_RS03280 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C3348_RS03280 PF00391 PEP-utilising enzyme, mobile domain C3348_RS03315 PF01385 Probable transposase C3348_RS03315 PF12323 Helix-turn-helix domain C3348_RS03315 PF07282 Putative transposase DNA-binding domain C3348_RS03325 PF09397 Ftsk gamma domain C3348_RS03325 PF17854 FtsK alpha domain C3348_RS03325 PF01580 FtsK/SpoIIIE family C3348_RS03350 PF01507 Phosphoadenosine phosphosulfate reductase family C3348_RS03350 PF11922 Domain of unknown function (DUF3440) C3348_RS03355 PF02195 ParB-like nuclease domain C3348_RS03370 PF05067 Manganese containing catalase C3348_RS03380 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain C3348_RS03380 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain C3348_RS03405 PF04229 GrpB protein C3348_RS03420 PF07282 Putative transposase DNA-binding domain C3348_RS03420 PF12323 Helix-turn-helix domain C3348_RS03420 PF01385 Probable transposase C3348_RS03425 PF00654 Voltage gated chloride channel C3348_RS03445 PF04397 LytTr DNA-binding domain C3348_RS03445 PF00072 Response regulator receiver domain C3348_RS03450 PF02687 FtsX-like permease family C3348_RS03455 PF00005 ABC transporter C3348_RS03480 PF13411 MerR HTH family regulatory protein C3348_RS03480 PF06445 GyrI-like small molecule binding domain C3348_RS03530 PF03796 DnaB-like helicase C terminal domain C3348_RS03530 PF00772 DnaB-like helicase N terminal domain C3348_RS03550 PF00664 ABC transporter transmembrane region C3348_RS03550 PF00005 ABC transporter C3348_RS03555 PF13545 Crp-like helix-turn-helix domain C3348_RS03555 PF00027 Cyclic nucleotide-binding domain C3348_RS03560 PF01554 MatE C3348_RS03575 PF08713 DNA alkylation repair enzyme C3348_RS03585 PF12697 Alpha/beta hydrolase family C3348_RS03630 PF00486 Transcriptional regulatory protein, C terminal C3348_RS03630 PF00072 Response regulator receiver domain C3348_RS03635 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS03635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS03640 PF00005 ABC transporter C3348_RS03650 PF12728 Helix-turn-helix domain C3348_RS03650 PF02661 Fic/DOC family C3348_RS03655 PF07729 FCD domain C3348_RS03655 PF00392 Bacterial regulatory proteins, gntR family C3348_RS03660 PF00326 Prolyl oligopeptidase family C3348_RS03660 PF07676 WD40-like Beta Propeller Repeat C3348_RS03665 PF00326 Prolyl oligopeptidase family C3348_RS03665 PF07676 WD40-like Beta Propeller Repeat C3348_RS03685 PF00155 Aminotransferase class I and II C3348_RS03685 PF00392 Bacterial regulatory proteins, gntR family C3348_RS03690 PF00005 ABC transporter C3348_RS03705 PF00654 Voltage gated chloride channel C3348_RS03725 PF12918 TcdB toxin N-terminal helical domain C3348_RS03725 PF01473 Putative cell wall binding repeat C3348_RS03725 PF11713 Peptidase C80 family C3348_RS03725 PF12920 TcdA/TcdB pore forming domain C3348_RS03725 PF12919 TcdA/TcdB catalytic glycosyltransferase domain C3348_RS03730 PF05105 Bacteriophage holin family C3348_RS03745 PF01473 Putative cell wall binding repeat C3348_RS03745 PF12919 TcdA/TcdB catalytic glycosyltransferase domain C3348_RS03745 PF12920 TcdA/TcdB pore forming domain C3348_RS03745 PF12918 TcdB toxin N-terminal helical domain C3348_RS03745 PF11713 Peptidase C80 family C3348_RS03780 PF00005 ABC transporter C3348_RS03785 PF00486 Transcriptional regulatory protein, C terminal C3348_RS03785 PF00072 Response regulator receiver domain C3348_RS03790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS03790 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS03830 PF08281 Sigma-70, region 4 C3348_RS03830 PF04542 Sigma-70 region 2 C3348_RS03845 PF07969 Amidohydrolase family C3348_RS03865 PF00083 Sugar (and other) transporter C3348_RS03875 PF00356 Bacterial regulatory proteins, lacI family C3348_RS03880 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS03880 PF17862 AAA+ lid domain C3348_RS03880 PF01434 Peptidase family M41 C3348_RS03885 PF05198 Translation initiation factor IF-3, N-terminal domain C3348_RS03885 PF00707 Translation initiation factor IF-3, C-terminal domain C3348_RS03890 PF01632 Ribosomal protein L35 C3348_RS03895 PF00453 Ribosomal protein L20 C3348_RS03925 PF09278 MerR, DNA binding C3348_RS03925 PF00376 MerR family regulatory protein C3348_RS03945 PF02386 Cation transport protein C3348_RS03950 PF02080 TrkA-C domain C3348_RS03950 PF02254 TrkA-N domain C3348_RS03955 PF00588 SpoU rRNA Methylase family C3348_RS03955 PF08032 RNA 2'-O ribose methyltransferase substrate binding C3348_RS03960 PF01409 tRNA synthetases class II core domain (F) C3348_RS03960 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain C3348_RS03965 PF03147 Ferredoxin-fold anticodon binding domain C3348_RS03965 PF03484 tRNA synthetase B5 domain C3348_RS03965 PF03483 B3/4 domain C3348_RS03965 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3348_RS03965 PF01588 Putative tRNA binding domain C3348_RS03980 PF01136 Peptidase family U32 C3348_RS03980 PF12392 Collagenase C3348_RS03990 PF00293 NUDIX domain C3348_RS04000 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS04000 PF17158 Membrane-associated sensor, integral membrane domain C3348_RS04005 PF01546 Peptidase family M20/M25/M40 C3348_RS04005 PF07687 Peptidase dimerisation domain C3348_RS04010 PF00488 MutS domain V C3348_RS04010 PF01713 Smr domain C3348_RS04015 PF04463 Protein of unknown function (DUF523) C3348_RS04020 PF05746 DALR anticodon binding domain C3348_RS04020 PF03485 Arginyl tRNA synthetase N terminal domain C3348_RS04020 PF00750 tRNA synthetases class I (R) C3348_RS04035 PF02310 B12 binding domain C3348_RS04035 PF04055 Radical SAM superfamily C3348_RS04050 PF01515 Phosphate acetyl/butaryl transferase C3348_RS04055 PF03063 Prismane/CO dehydrogenase family C3348_RS04060 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3348_RS04065 PF01268 Formate--tetrahydrofolate ligase C3348_RS04070 PF04961 Formiminotransferase-cyclodeaminase C3348_RS04075 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain C3348_RS04075 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain C3348_RS04085 PF02574 Homocysteine S-methyltransferase C3348_RS04085 PF02219 Methylenetetrahydrofolate reductase C3348_RS04090 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3348_RS04090 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS04100 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit C3348_RS04105 PF04060 Putative Fe-S cluster C3348_RS04105 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit C3348_RS04110 PF00809 Pterin binding enzyme C3348_RS04115 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain C3348_RS04115 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit C3348_RS04120 PF01597 Glycine cleavage H-protein C3348_RS04135 PF04055 Radical SAM superfamily C3348_RS04135 PF06968 Biotin and Thiamin Synthesis associated domain C3348_RS04140 PF03099 Biotin/lipoate A/B protein ligase family C3348_RS04160 PF02811 PHP domain C3348_RS04175 PF00266 Aminotransferase class-V C3348_RS04175 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS04180 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3348_RS04180 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3348_RS04185 PF04346 Ethanolamine utilisation protein, EutH C3348_RS04190 PF08220 DeoR-like helix-turn-helix domain C3348_RS04190 PF00455 DeoR C terminal sensor domain C3348_RS04200 PF01618 MotA/TolQ/ExbB proton channel family C3348_RS04205 PF13677 Membrane MotB of proton-channel complex MotA/MotB C3348_RS04205 PF00691 OmpA family C3348_RS04220 PF00563 EAL domain C3348_RS04220 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS04220 PF03707 Bacterial signalling protein N terminal repeat C3348_RS04225 PF00580 UvrD/REP helicase N-terminal domain C3348_RS04225 PF13361 UvrD-like helicase C-terminal domain C3348_RS04230 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3348_RS04235 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS04240 PF00005 ABC transporter C3348_RS04245 PF00266 Aminotransferase class-V C3348_RS04250 PF02568 Thiamine biosynthesis protein (ThiI) C3348_RS04250 PF02926 THUMP domain C3348_RS04255 PF07963 Prokaryotic N-terminal methylation motif C3348_RS04255 PF00114 Pilin (bacterial filament) C3348_RS04260 PF00881 Nitroreductase family C3348_RS04265 PF03707 Bacterial signalling protein N terminal repeat C3348_RS04265 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS04265 PF00563 EAL domain C3348_RS04270 PF04055 Radical SAM superfamily C3348_RS04275 PF01228 Glycine radical C3348_RS04275 PF02901 Pyruvate formate lyase-like C3348_RS04280 PF01699 Sodium/calcium exchanger protein C3348_RS04285 PF00270 DEAD/DEAH box helicase C3348_RS04285 PF00271 Helicase conserved C-terminal domain C3348_RS04300 PF03608 PTS system enzyme II sorbitol-specific factor C3348_RS04305 PF07663 Sorbitol phosphotransferase enzyme II C-terminus C3348_RS04305 PF03612 Sorbitol phosphotransferase enzyme II N-terminus C3348_RS04310 PF07663 Sorbitol phosphotransferase enzyme II C-terminus C3348_RS04310 PF03612 Sorbitol phosphotransferase enzyme II N-terminus C3348_RS04315 PF03829 PTS system glucitol/sorbitol-specific IIA component C3348_RS04320 PF00106 short chain dehydrogenase C3348_RS04335 PF07282 Putative transposase DNA-binding domain C3348_RS04335 PF01385 Probable transposase C3348_RS04335 PF12323 Helix-turn-helix domain C3348_RS04340 PF01568 Molydopterin dinucleotide binding domain C3348_RS04340 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3348_RS04340 PF00384 Molybdopterin oxidoreductase C3348_RS04345 PF01740 STAS domain C3348_RS04350 PF13581 Histidine kinase-like ATPase domain C3348_RS04355 PF04545 Sigma-70, region 4 C3348_RS04355 PF04542 Sigma-70 region 2 C3348_RS04355 PF04539 Sigma-70 region 3 C3348_RS04360 PF03862 SpoVAC/SpoVAEB sporulation membrane protein C3348_RS04365 PF07451 Stage V sporulation protein AD (SpoVAD) C3348_RS04375 PF00356 Bacterial regulatory proteins, lacI family C3348_RS04390 PF01546 Peptidase family M20/M25/M40 C3348_RS04405 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3348_RS04410 PF00905 Penicillin binding protein transpeptidase domain C3348_RS04410 PF00912 Transglycosylase C3348_RS04420 PF17820 PDZ domain C3348_RS04420 PF05580 SpoIVB peptidase S55 C3348_RS04425 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS04425 PF08239 Bacterial SH3 domain C3348_RS04430 PF12848 ABC transporter C3348_RS04430 PF00005 ABC transporter C3348_RS04445 PF16360 GTP-binding GTPase Middle Region C3348_RS04445 PF13167 GTP-binding GTPase N-terminal C3348_RS04445 PF01926 50S ribosome-binding GTPase C3348_RS04460 PF09186 Domain of unknown function (DUF1949) C3348_RS04460 PF01205 Uncharacterized protein family UPF0029 C3348_RS04470 PF01925 Sulfite exporter TauE/SafE C3348_RS04475 PF02540 NAD synthase C3348_RS04480 PF01709 Transcriptional regulator C3348_RS04485 PF00356 Bacterial regulatory proteins, lacI family C3348_RS04490 PF00682 HMGL-like C3348_RS04500 PF02515 CoA-transferase family III C3348_RS04505 PF00378 Enoyl-CoA hydratase/isomerase C3348_RS04515 PF02515 CoA-transferase family III C3348_RS04520 PF02770 Acyl-CoA dehydrogenase, middle domain C3348_RS04520 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3348_RS04520 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3348_RS04525 PF01012 Electron transfer flavoprotein domain C3348_RS04530 PF01012 Electron transfer flavoprotein domain C3348_RS04530 PF13237 4Fe-4S dicluster domain C3348_RS04530 PF00766 Electron transfer flavoprotein FAD-binding domain C3348_RS04535 PF13426 PAS domain C3348_RS04535 PF00158 Sigma-54 interaction domain C3348_RS04535 PF02954 Bacterial regulatory protein, Fis family C3348_RS04555 PF12724 Flavodoxin domain C3348_RS04560 PF03707 Bacterial signalling protein N terminal repeat C3348_RS04560 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS04560 PF00563 EAL domain C3348_RS04575 PF00392 Bacterial regulatory proteins, gntR family C3348_RS04575 PF07729 FCD domain C3348_RS04580 PF07690 Major Facilitator Superfamily C3348_RS04585 PF02378 Phosphotransferase system, EIIC C3348_RS04585 PF00367 phosphotransferase system, EIIB C3348_RS04585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS04590 PF00232 Glycosyl hydrolase family 1 C3348_RS04595 PF00874 PRD domain C3348_RS04595 PF03123 CAT RNA binding domain C3348_RS04600 PF00486 Transcriptional regulatory protein, C terminal C3348_RS04600 PF00072 Response regulator receiver domain C3348_RS04605 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS04605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS04610 PF00005 ABC transporter C3348_RS04625 PF02915 Rubrerythrin C3348_RS04635 PF01880 Desulfoferrodoxin C3348_RS04640 PF01645 Conserved region in glutamate synthase C3348_RS04655 PF00270 DEAD/DEAH box helicase C3348_RS04655 PF00271 Helicase conserved C-terminal domain C3348_RS04660 PF00682 HMGL-like C3348_RS04665 PF00330 Aconitase family (aconitate hydratase) C3348_RS04670 PF00180 Isocitrate/isopropylmalate dehydrogenase C3348_RS04670 PF18324 Hypothetical protein TT1725 C3348_RS04675 PF01047 MarR family C3348_RS04700 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3348_RS04705 PF01808 AICARFT/IMPCHase bienzyme C3348_RS04705 PF02142 MGS-like domain C3348_RS04715 PF00534 Glycosyl transferases group 1 C3348_RS04715 PF13439 Glycosyltransferase Family 4 C3348_RS04745 PF01546 Peptidase family M20/M25/M40 C3348_RS04750 PF01106 NifU-like domain C3348_RS04765 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS04770 PF12911 N-terminal TM domain of oligopeptide transport permease C C3348_RS04770 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS04775 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3348_RS04780 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3348_RS04780 PF00005 ABC transporter C3348_RS04785 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3348_RS04785 PF00005 ABC transporter C3348_RS04790 PF00158 Sigma-54 interaction domain C3348_RS04790 PF00874 PRD domain C3348_RS04790 PF03610 PTS system fructose IIA component C3348_RS04805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS04810 PF02378 Phosphotransferase system, EIIC C3348_RS04820 PF02056 Family 4 glycosyl hydrolase C3348_RS04820 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3348_RS04825 PF01661 Macro domain C3348_RS04830 PF12146 Serine aminopeptidase, S33 C3348_RS04840 PF12727 PBP superfamily domain C3348_RS04840 PF12728 Helix-turn-helix domain C3348_RS04850 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS04855 PF12857 TOBE-like domain C3348_RS04855 PF17850 CysA C-terminal regulatory domain C3348_RS04855 PF00005 ABC transporter C3348_RS04860 PF14602 Hexapeptide repeat of succinyl-transferase C3348_RS04860 PF12464 Maltose acetyltransferase C3348_RS04870 PF09383 NIL domain C3348_RS04870 PF00005 ABC transporter C3348_RS04875 PF02653 Branched-chain amino acid transport system / permease component C3348_RS04880 PF04392 ABC transporter substrate binding protein C3348_RS04885 PF00005 ABC transporter C3348_RS04895 PF03853 YjeF-related protein N-terminus C3348_RS04895 PF01256 Carbohydrate kinase C3348_RS04910 PF07282 Putative transposase DNA-binding domain C3348_RS04910 PF12323 Helix-turn-helix domain C3348_RS04910 PF01385 Probable transposase C3348_RS04920 PF01145 SPFH domain / Band 7 family C3348_RS04925 PF00483 Nucleotidyl transferase C3348_RS04930 PF00483 Nucleotidyl transferase C3348_RS04935 PF08323 Starch synthase catalytic domain C3348_RS04935 PF00534 Glycosyl transferases group 1 C3348_RS04940 PF00343 Carbohydrate phosphorylase C3348_RS04945 PF00395 S-layer homology domain C3348_RS04945 PF02903 Alpha amylase, N-terminal ig-like domain C3348_RS04945 PF00128 Alpha amylase, catalytic domain C3348_RS04950 PF07729 FCD domain C3348_RS04950 PF00392 Bacterial regulatory proteins, gntR family C3348_RS04955 PF01276 Orn/Lys/Arg decarboxylase, major domain C3348_RS04955 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C3348_RS04960 PF02675 S-adenosylmethionine decarboxylase C3348_RS04965 PF17284 Spermidine synthase tetramerisation domain C3348_RS04970 PF00491 Arginase family C3348_RS04975 PF00313 'Cold-shock' DNA-binding domain C3348_RS04985 PF13187 4Fe-4S dicluster domain C3348_RS04985 PF02906 Iron only hydrogenase large subunit, C-terminal domain C3348_RS05000 PF01385 Probable transposase C3348_RS05000 PF07282 Putative transposase DNA-binding domain C3348_RS05000 PF12323 Helix-turn-helix domain C3348_RS05020 PF08903 Domain of unknown function (DUF1846) C3348_RS05025 PF11798 IMS family HHH motif C3348_RS05025 PF11799 impB/mucB/samB family C-terminal domain C3348_RS05025 PF00817 impB/mucB/samB family C3348_RS05030 PF00005 ABC transporter C3348_RS05030 PF00571 CBS domain C3348_RS05035 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS05040 PF16916 Dimerisation domain of Zinc Transporter C3348_RS05040 PF01545 Cation efflux family C3348_RS05070 PF01554 MatE C3348_RS05075 PF00575 S1 RNA binding domain C3348_RS05075 PF02401 LytB protein C3348_RS05090 PF08502 LeuA allosteric (dimerisation) domain C3348_RS05090 PF00682 HMGL-like C3348_RS05095 PF00330 Aconitase family (aconitate hydratase) C3348_RS05100 PF00694 Aconitase C-terminal domain C3348_RS05105 PF00180 Isocitrate/isopropylmalate dehydrogenase C3348_RS05115 PF00266 Aminotransferase class-V C3348_RS05120 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain C3348_RS05120 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain C3348_RS05135 PF08448 PAS fold C3348_RS05135 PF00563 EAL domain C3348_RS05135 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS05135 PF05231 MASE1 C3348_RS05135 PF08447 PAS fold C3348_RS05135 PF13426 PAS domain C3348_RS05140 PF11842 Domain of unknown function (DUF3362) C3348_RS05140 PF04055 Radical SAM superfamily C3348_RS05140 PF08497 Radical SAM N-terminal C3348_RS05155 PF00005 ABC transporter C3348_RS05160 PF04073 Aminoacyl-tRNA editing domain C3348_RS05165 PF05681 Fumarate hydratase (Fumerase) C3348_RS05175 PF00390 Malic enzyme, N-terminal domain C3348_RS05175 PF03949 Malic enzyme, NAD binding domain C3348_RS05185 PF00486 Transcriptional regulatory protein, C terminal C3348_RS05185 PF00072 Response regulator receiver domain C3348_RS05190 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS05190 PF00672 HAMP domain C3348_RS05190 PF00989 PAS fold C3348_RS05190 PF18698 Histidine kinase sensor domain C3348_RS05190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS05195 PF00005 ABC transporter C3348_RS05195 PF12704 MacB-like periplasmic core domain C3348_RS05195 PF02687 FtsX-like permease family C3348_RS05210 PF00392 Bacterial regulatory proteins, gntR family C3348_RS05210 PF07702 UTRA domain C3348_RS05215 PF01979 Amidohydrolase family C3348_RS05220 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase C3348_RS05230 PF00486 Transcriptional regulatory protein, C terminal C3348_RS05230 PF00072 Response regulator receiver domain C3348_RS05235 PF16736 Single Cache-like C3348_RS05235 PF00989 PAS fold C3348_RS05235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS05235 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS05240 PF13426 PAS domain C3348_RS05240 PF00563 EAL domain C3348_RS05240 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS05250 PF13411 MerR HTH family regulatory protein C3348_RS05250 PF06445 GyrI-like small molecule binding domain C3348_RS05255 PF00664 ABC transporter transmembrane region C3348_RS05255 PF00005 ABC transporter C3348_RS05260 PF00005 ABC transporter C3348_RS05260 PF00664 ABC transporter transmembrane region C3348_RS05290 PF08402 TOBE domain C3348_RS05290 PF00005 ABC transporter C3348_RS05295 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS05300 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS05305 PF13416 Bacterial extracellular solute-binding protein C3348_RS05315 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) C3348_RS05325 PF03170 Bacterial cellulose synthase subunit C3348_RS05335 PF02350 UDP-N-acetylglucosamine 2-epimerase C3348_RS05340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C3348_RS05340 PF01476 LysM domain C3348_RS05365 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS05365 PF08239 Bacterial SH3 domain C3348_RS05370 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS05370 PF04122 Putative cell wall binding repeat 2 C3348_RS05380 PF13361 UvrD-like helicase C-terminal domain C3348_RS05380 PF00580 UvrD/REP helicase N-terminal domain C3348_RS05390 PF12705 PD-(D/E)XK nuclease superfamily C3348_RS05395 PF13361 UvrD-like helicase C-terminal domain C3348_RS05395 PF12705 PD-(D/E)XK nuclease superfamily C3348_RS05395 PF00580 UvrD/REP helicase N-terminal domain C3348_RS05400 PF00149 Calcineurin-like phosphoesterase C3348_RS05400 PF12320 Type 5 capsule protein repressor C-terminal domain C3348_RS05405 PF13175 AAA ATPase domain C3348_RS05410 PF00571 CBS domain C3348_RS05410 PF01595 Cyclin M transmembrane N-terminal domain C3348_RS05410 PF03471 Transporter associated domain C3348_RS05420 PF01546 Peptidase family M20/M25/M40 C3348_RS05420 PF07687 Peptidase dimerisation domain C3348_RS05430 PF12850 Calcineurin-like phosphoesterase superfamily domain C3348_RS05435 PF01513 ATP-NAD kinase C3348_RS05440 PF00005 ABC transporter C3348_RS05460 PF04073 Aminoacyl-tRNA editing domain C3348_RS05465 PF00441 Acyl-CoA dehydrogenase, C-terminal domain C3348_RS05465 PF02771 Acyl-CoA dehydrogenase, N-terminal domain C3348_RS05465 PF02770 Acyl-CoA dehydrogenase, middle domain C3348_RS05470 PF01012 Electron transfer flavoprotein domain C3348_RS05475 PF00766 Electron transfer flavoprotein FAD-binding domain C3348_RS05475 PF01012 Electron transfer flavoprotein domain C3348_RS05480 PF00378 Enoyl-CoA hydratase/isomerase C3348_RS05485 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain C3348_RS05485 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain C3348_RS05490 PF00108 Thiolase, N-terminal domain C3348_RS05490 PF02803 Thiolase, C-terminal domain C3348_RS05495 PF00849 RNA pseudouridylate synthase C3348_RS05495 PF01479 S4 domain C3348_RS05505 PF00550 Phosphopantetheine attachment site C3348_RS05530 PF00356 Bacterial regulatory proteins, lacI family C3348_RS05560 PF02811 PHP domain C3348_RS05565 PF00155 Aminotransferase class I and II C3348_RS05570 PF05979 Bacterial protein of unknown function (DUF896) C3348_RS05575 PF02127 Aminopeptidase I zinc metalloprotease (M18) C3348_RS05580 PF07702 UTRA domain C3348_RS05580 PF00392 Bacterial regulatory proteins, gntR family C3348_RS05595 PF03830 PTS system sorbose subfamily IIB component C3348_RS05600 PF03609 PTS system sorbose-specific iic component C3348_RS05605 PF03613 PTS system mannose/fructose/sorbose family IID component C3348_RS05610 PF03466 LysR substrate binding domain C3348_RS05610 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS05620 PF00994 Probable molybdopterin binding domain C3348_RS05620 PF03454 MoeA C-terminal region (domain IV) C3348_RS05620 PF03453 MoeA N-terminal region (domain I and II) C3348_RS05625 PF02606 Tetraacyldisaccharide-1-P 4'-kinase C3348_RS05630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS05635 PF00664 ABC transporter transmembrane region C3348_RS05635 PF00005 ABC transporter C3348_RS05645 PF07687 Peptidase dimerisation domain C3348_RS05645 PF01546 Peptidase family M20/M25/M40 C3348_RS05650 PF02535 ZIP Zinc transporter C3348_RS05660 PF00072 Response regulator receiver domain C3348_RS05660 PF04397 LytTr DNA-binding domain C3348_RS05675 PF02901 Pyruvate formate lyase-like C3348_RS05675 PF01228 Glycine radical C3348_RS05680 PF13187 4Fe-4S dicluster domain C3348_RS05680 PF04055 Radical SAM superfamily C3348_RS05685 PF07883 Cupin domain C3348_RS05685 PF01381 Helix-turn-helix C3348_RS05710 PF12833 Helix-turn-helix domain C3348_RS05710 PF06445 GyrI-like small molecule binding domain C3348_RS05730 PF07282 Putative transposase DNA-binding domain C3348_RS05730 PF12323 Helix-turn-helix domain C3348_RS05730 PF01385 Probable transposase C3348_RS05750 PF03062 MBOAT, membrane-bound O-acyltransferase family C3348_RS05765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain C3348_RS05765 PF01367 5'-3' exonuclease, C-terminal SAM fold C3348_RS05765 PF00476 DNA polymerase family A C3348_RS05770 PF01121 Dephospho-CoA kinase C3348_RS05780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3348_RS05795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3348_RS05800 PF00877 NlpC/P60 family C3348_RS05810 PF13237 4Fe-4S dicluster domain C3348_RS05810 PF10531 SLBB domain C3348_RS05810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3348_RS05810 PF13375 RnfC Barrel sandwich hybrid domain C3348_RS05815 PF03116 NQR2, RnfD, RnfE family C3348_RS05820 PF04205 FMN-binding domain C3348_RS05825 PF02508 Rnf-Nqr subunit, membrane protein C3348_RS05830 PF02508 Rnf-Nqr subunit, membrane protein C3348_RS05835 PF04060 Putative Fe-S cluster C3348_RS05835 PF13187 4Fe-4S dicluster domain C3348_RS05835 PF00037 4Fe-4S binding domain C3348_RS05840 PF02545 Maf-like protein C3348_RS05845 PF04002 RadC-like JAB domain C3348_RS05865 PF00905 Penicillin binding protein transpeptidase domain C3348_RS05870 PF03775 Septum formation inhibitor MinC, C-terminal domain C3348_RS05875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3348_RS05880 PF03776 Septum formation topological specificity factor MinE C3348_RS05885 PF01098 Cell cycle protein C3348_RS05890 PF02142 MGS-like domain C3348_RS05895 PF03551 Transcriptional regulator PadR-like family C3348_RS05910 PF00258 Flavodoxin C3348_RS05910 PF00753 Metallo-beta-lactamase superfamily C3348_RS05925 PF10150 Ribonuclease E/G family C3348_RS05925 PF00575 S1 RNA binding domain C3348_RS05930 PF00829 Ribosomal prokaryotic L21 protein C3348_RS05940 PF01016 Ribosomal L27 protein C3348_RS05945 PF09269 Domain of unknown function (DUF1967) C3348_RS05945 PF01926 50S ribosome-binding GTPase C3348_RS05945 PF01018 GTP1/OBG C3348_RS05955 PF00742 Homoserine dehydrogenase C3348_RS05955 PF01842 ACT domain C3348_RS05955 PF03447 Homoserine dehydrogenase, NAD binding domain C3348_RS05965 PF07670 Nucleoside recognition C3348_RS05970 PF07729 FCD domain C3348_RS05970 PF00392 Bacterial regulatory proteins, gntR family C3348_RS05975 PF09861 Lactate racemase N-terminal domain C3348_RS05980 PF01012 Electron transfer flavoprotein domain C3348_RS05985 PF01012 Electron transfer flavoprotein domain C3348_RS05985 PF00766 Electron transfer flavoprotein FAD-binding domain C3348_RS05990 PF02913 FAD linked oxidases, C-terminal domain C3348_RS05990 PF01565 FAD binding domain C3348_RS05995 PF05636 HIGH Nucleotidyl Transferase C3348_RS06000 PF00871 Acetokinase family C3348_RS06010 PF01783 Ribosomal L32p protein family C3348_RS06020 PF02504 Fatty acid synthesis protein C3348_RS06025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3348_RS06025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal C3348_RS06030 PF03060 Nitronate monooxygenase C3348_RS06035 PF00698 Acyl transferase domain C3348_RS06045 PF00550 Phosphopantetheine attachment site C3348_RS06050 PF02801 Beta-ketoacyl synthase, C-terminal domain C3348_RS06050 PF00109 Beta-ketoacyl synthase, N-terminal domain C3348_RS06055 PF07694 5TMR of 5TMR-LYT C3348_RS06055 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS06060 PF13426 PAS domain C3348_RS06060 PF02954 Bacterial regulatory protein, Fis family C3348_RS06060 PF00158 Sigma-54 interaction domain C3348_RS06070 PF07722 Peptidase C26 C3348_RS06075 PF13520 Amino acid permease C3348_RS06085 PF06874 Firmicute fructose-1,6-bisphosphatase C3348_RS06125 PF12685 SpoIIIAH-like protein C3348_RS06130 PF03780 Asp23 family, cell envelope-related function C3348_RS06135 PF01029 NusB family C3348_RS06140 PF00814 Glycoprotease family C3348_RS06145 PF02601 Exonuclease VII, large subunit C3348_RS06145 PF13742 OB-fold nucleic acid binding domain C3348_RS06155 PF00348 Polyprenyl synthetase C3348_RS06160 PF02681 Divergent PAP2 family C3348_RS06165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase C3348_RS06165 PF02780 Transketolase, C-terminal domain C3348_RS06165 PF02779 Transketolase, pyrimidine binding domain C3348_RS06170 PF01479 S4 domain C3348_RS06170 PF01728 FtsJ-like methyltransferase C3348_RS06175 PF02463 RecF/RecN/SMC N terminal domain C3348_RS06185 PF00583 Acetyltransferase (GNAT) family C3348_RS06190 PF00583 Acetyltransferase (GNAT) family C3348_RS06195 PF05580 SpoIVB peptidase S55 C3348_RS06195 PF17820 PDZ domain C3348_RS06200 PF08769 Sporulation initiation factor Spo0A C terminal C3348_RS06200 PF00072 Response regulator receiver domain C3348_RS06215 PF00535 Glycosyl transferase family 2 C3348_RS06230 PF00293 NUDIX domain C3348_RS06240 PF02899 Phage integrase, N-terminal SAM-like domain C3348_RS06240 PF00589 Phage integrase family C3348_RS06245 PF01676 Metalloenzyme superfamily C3348_RS06250 PF01048 Phosphorylase superfamily C3348_RS06255 PF00591 Glycosyl transferase family, a/b domain C3348_RS06255 PF02885 Glycosyl transferase family, helical bundle domain C3348_RS06255 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain C3348_RS06260 PF02618 YceG-like family C3348_RS06265 PF01596 O-methyltransferase C3348_RS06270 PF01136 Peptidase family U32 C3348_RS06270 PF16325 Peptidase family U32 C-terminal domain C3348_RS06275 PF03793 PASTA domain C3348_RS06275 PF03717 Penicillin-binding Protein dimerisation domain C3348_RS06275 PF00905 Penicillin binding protein transpeptidase domain C3348_RS06310 PF13333 Integrase core domain C3348_RS06310 PF00665 Integrase core domain C3348_RS06385 PF04892 VanZ like family C3348_RS06395 PF04542 Sigma-70 region 2 C3348_RS06395 PF04545 Sigma-70, region 4 C3348_RS06425 PF08207 Elongation factor P (EF-P) KOW-like domain C3348_RS06425 PF01132 Elongation factor P (EF-P) OB domain C3348_RS06425 PF09285 Elongation factor P, C-terminal C3348_RS06435 PF14622 Ribonuclease-III-like C3348_RS06435 PF00035 Double-stranded RNA binding motif C3348_RS06445 PF06470 SMC proteins Flexible Hinge Domain C3348_RS06445 PF02463 RecF/RecN/SMC N terminal domain C3348_RS06450 PF00448 SRP54-type protein, GTPase domain C3348_RS06450 PF02881 SRP54-type protein, helical bundle domain C3348_RS06455 PF04297 Putative helix-turn-helix protein, YlxM / p13 like C3348_RS06460 PF02978 Signal peptide binding domain C3348_RS06460 PF00448 SRP54-type protein, GTPase domain C3348_RS06460 PF02881 SRP54-type protein, helical bundle domain C3348_RS06465 PF00886 Ribosomal protein S16 C3348_RS06475 PF05239 PRC-barrel domain C3348_RS06475 PF01782 RimM N-terminal domain C3348_RS06480 PF01746 tRNA (Guanine-1)-methyltransferase C3348_RS06485 PF01245 Ribosomal protein L19 C3348_RS06490 PF01926 50S ribosome-binding GTPase C3348_RS06495 PF05525 Branched-chain amino acid transport protein C3348_RS06500 PF05525 Branched-chain amino acid transport protein C3348_RS06505 PF00317 Ribonucleotide reductase, all-alpha domain C3348_RS06505 PF02867 Ribonucleotide reductase, barrel domain C3348_RS06505 PF03477 ATP cone domain C3348_RS06510 PF01351 Ribonuclease HII C3348_RS06515 PF01070 FMN-dependent dehydrogenase C3348_RS06540 PF00005 ABC transporter C3348_RS06545 PF00072 Response regulator receiver domain C3348_RS06545 PF00196 Bacterial regulatory proteins, luxR family C3348_RS06550 PF07730 Histidine kinase C3348_RS06555 PF02021 Uncharacterised protein family UPF0102 C3348_RS06560 PF13335 Magnesium chelatase, subunit ChlI C-terminal C3348_RS06560 PF01078 Magnesium chelatase, subunit ChlI C3348_RS06565 PF17782 DprA winged helix domain C3348_RS06565 PF02481 DNA recombination-mediator protein A C3348_RS06570 PF01751 Toprim domain C3348_RS06570 PF01396 Topoisomerase DNA binding C4 zinc finger C3348_RS06570 PF01131 DNA topoisomerase C3348_RS06575 PF06018 CodY GAF-like domain C3348_RS06575 PF08222 CodY helix-turn-helix domain C3348_RS06580 PF16193 AAA C-terminal domain C3348_RS06580 PF12002 MgsA AAA+ ATPase C terminal C3348_RS06580 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3348_RS06590 PF02082 Transcriptional regulator C3348_RS06595 PF00266 Aminotransferase class-V C3348_RS06600 PF01592 NifU-like N terminal domain C3348_RS06610 PF02272 DHHA1 domain C3348_RS06610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3348_RS06610 PF01411 tRNA synthetases class II (A) C3348_RS06615 PF06135 IreB regulatory phosphoprotein C3348_RS06625 PF03652 Holliday junction resolvase C3348_RS06630 PF06949 Protein of unknown function (DUF1292) C3348_RS06635 PF01475 Ferric uptake regulator family C3348_RS06645 PF00753 Metallo-beta-lactamase superfamily C3348_RS06645 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain C3348_RS06645 PF17770 Ribonuclease J C-terminal domain C3348_RS06655 PF07943 Penicillin-binding protein 5, C-terminal domain C3348_RS06655 PF00768 D-alanyl-D-alanine carboxypeptidase C3348_RS06665 PF12833 Helix-turn-helix domain C3348_RS06665 PF02311 AraC-like ligand binding domain C3348_RS06670 PF02163 Peptidase family M50 C3348_RS06675 PF02616 Segregation and condensation protein ScpA C3348_RS06680 PF04079 Segregation and condensation complex subunit ScpB C3348_RS06700 PF00883 Cytosol aminopeptidase family, catalytic domain C3348_RS06700 PF02789 Cytosol aminopeptidase family, N-terminal domain C3348_RS06720 PF02146 Sir2 family C3348_RS06725 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C3348_RS06725 PF13457 GW (Gly-Tryp) dipeptide domain C3348_RS06730 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3348_RS06730 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3348_RS06730 PF14579 Helix-hairpin-helix motif C3348_RS06730 PF02811 PHP domain C3348_RS06730 PF00929 Exonuclease C3348_RS06730 PF01336 OB-fold nucleic acid binding domain C3348_RS06730 PF11490 DNA polymerase III polC-type N-terminus II C3348_RS06735 PF17384 RimP C-terminal SH3 domain C3348_RS06735 PF02576 RimP N-terminal domain C3348_RS06740 PF08529 NusA N-terminal domain C3348_RS06740 PF00575 S1 RNA binding domain C3348_RS06740 PF13184 NusA-like KH domain C3348_RS06745 PF04296 Protein of unknown function (DUF448) C3348_RS06750 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family C3348_RS06755 PF11987 Translation-initiation factor 2 C3348_RS06755 PF00009 Elongation factor Tu GTP binding domain C3348_RS06755 PF04760 Translation initiation factor IF-2, N-terminal region C3348_RS06760 PF02033 Ribosome-binding factor A C3348_RS06765 PF02272 DHHA1 domain C3348_RS06765 PF01368 DHH family C3348_RS06770 PF16198 tRNA pseudouridylate synthase B C-terminal domain C3348_RS06770 PF01509 TruB family pseudouridylate synthase (N terminal domain) C3348_RS06775 PF06574 FAD synthetase C3348_RS06775 PF01687 Riboflavin kinase C3348_RS06785 PF00312 Ribosomal protein S15 C3348_RS06790 PF02645 Uncharacterised protein, DegV family COG1307 C3348_RS06795 PF00575 S1 RNA binding domain C3348_RS06795 PF01138 3' exoribonuclease family, domain 1 C3348_RS06795 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain C3348_RS06795 PF03725 3' exoribonuclease family, domain 2 C3348_RS06795 PF00013 KH domain C3348_RS06800 PF01522 Polysaccharide deacetylase C3348_RS06800 PF13739 Deacetylase PdaC C3348_RS06800 PF11738 Protein of unknown function (DUF3298) C3348_RS06805 PF00675 Insulinase (Peptidase family M16) C3348_RS06805 PF05193 Peptidase M16 inactive domain C3348_RS06810 PF05239 PRC-barrel domain C3348_RS06815 PF13840 ACT domain C3348_RS06815 PF00696 Amino acid kinase family C3348_RS06820 PF00574 Clp protease C3348_RS06825 PF01580 FtsK/SpoIIIE family C3348_RS06825 PF17854 FtsK alpha domain C3348_RS06825 PF09397 Ftsk gamma domain C3348_RS06835 PF18693 TRAM domain C3348_RS06835 PF04055 Radical SAM superfamily C3348_RS06835 PF00919 Uncharacterized protein family UPF0004 C3348_RS06840 PF01066 CDP-alcohol phosphatidyltransferase C3348_RS06845 PF00154 recA bacterial DNA recombination protein C3348_RS06850 PF12072 Domain of unknown function (DUF3552) C3348_RS06850 PF01966 HD domain C3348_RS06850 PF00013 KH domain C3348_RS06860 PF10502 Signal peptidase, peptidase S26 C3348_RS06865 PF02673 Bacitracin resistance protein BacA C3348_RS06875 PF10415 Fumarase C C-terminus C3348_RS06875 PF00206 Lyase C3348_RS06885 PF00367 phosphotransferase system, EIIB C3348_RS06885 PF02378 Phosphotransferase system, EIIC C3348_RS06890 PF01418 Helix-turn-helix domain, rpiR family C3348_RS06890 PF01380 SIS domain C3348_RS06895 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3348_RS06895 PF02056 Family 4 glycosyl hydrolase C3348_RS06900 PF00155 Aminotransferase class I and II C3348_RS06910 PF03372 Endonuclease/Exonuclease/phosphatase family C3348_RS06925 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C3348_RS06925 PF00534 Glycosyl transferases group 1 C3348_RS06930 PF03551 Transcriptional regulator PadR-like family C3348_RS06950 PF00005 ABC transporter C3348_RS06965 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS06965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS06980 PF00313 'Cold-shock' DNA-binding domain C3348_RS07010 PF01381 Helix-turn-helix C3348_RS07055 PF00877 NlpC/P60 family C3348_RS07055 PF01476 LysM domain C3348_RS07055 PF08239 Bacterial SH3 domain C3348_RS07070 PF04865 Baseplate J-like protein C3348_RS07075 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) C3348_RS07120 PF01381 Helix-turn-helix C3348_RS07125 PF07690 Major Facilitator Superfamily C3348_RS07135 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3348_RS07135 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3348_RS07140 PF03600 Citrate transporter C3348_RS07140 PF02080 TrkA-C domain C3348_RS07145 PF03746 LamB/YcsF family C3348_RS07150 PF01566 Natural resistance-associated macrophage protein C3348_RS07155 PF02682 Carboxyltransferase domain, subdomain C and D C3348_RS07160 PF02626 Carboxyltransferase domain, subdomain A and B C3348_RS07165 PF01381 Helix-turn-helix C3348_RS07165 PF08671 Anti-repressor SinI C3348_RS07170 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain C3348_RS07170 PF13378 Enolase C-terminal domain-like C3348_RS07180 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain C3348_RS07180 PF02129 X-Pro dipeptidyl-peptidase (S15 family) C3348_RS07210 PF18389 TrmO C-terminal domain C3348_RS07210 PF01980 tRNA-methyltransferase O C3348_RS07215 PF01546 Peptidase family M20/M25/M40 C3348_RS07215 PF07687 Peptidase dimerisation domain C3348_RS07220 PF17676 LD-carboxypeptidase C-terminal domain C3348_RS07220 PF02016 LD-carboxypeptidase N-terminal domain C3348_RS07235 PF03009 Glycerophosphoryl diester phosphodiesterase family C3348_RS07240 PF13193 AMP-binding enzyme C-terminal domain C3348_RS07240 PF00501 AMP-binding enzyme C3348_RS07240 PF00550 Phosphopantetheine attachment site C3348_RS07240 PF00668 Condensation domain C3348_RS07255 PF00005 ABC transporter C3348_RS07255 PF16326 ABC transporter C-terminal domain C3348_RS07255 PF12848 ABC transporter C3348_RS07265 PF00392 Bacterial regulatory proteins, gntR family C3348_RS07265 PF00155 Aminotransferase class I and II C3348_RS07270 PF01820 D-ala D-ala ligase N-terminus C3348_RS07270 PF07478 D-ala D-ala ligase C-terminus C3348_RS07275 PF02464 Competence-damaged protein C3348_RS07275 PF18146 Damage-inducible protein CinA KH domain C3348_RS07275 PF00994 Probable molybdopterin binding domain C3348_RS07290 PF00158 Sigma-54 interaction domain C3348_RS07290 PF13188 PAS domain C3348_RS07290 PF02954 Bacterial regulatory protein, Fis family C3348_RS07300 PF04055 Radical SAM superfamily C3348_RS07300 PF16199 Radical_SAM C-terminal domain C3348_RS07335 PF00665 Integrase core domain C3348_RS07335 PF13333 Integrase core domain C3348_RS07340 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS07340 PF08447 PAS fold C3348_RS07340 PF08448 PAS fold C3348_RS07340 PF13426 PAS domain C3348_RS07340 PF00563 EAL domain C3348_RS07340 PF05231 MASE1 C3348_RS07345 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS07350 PF03707 Bacterial signalling protein N terminal repeat C3348_RS07350 PF00563 EAL domain C3348_RS07350 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS07355 PF13411 MerR HTH family regulatory protein C3348_RS07355 PF06445 GyrI-like small molecule binding domain C3348_RS07370 PF02308 MgtC family C3348_RS07375 PF00857 Isochorismatase family C3348_RS07400 PF12833 Helix-turn-helix domain C3348_RS07400 PF02311 AraC-like ligand binding domain C3348_RS07405 PF01522 Polysaccharide deacetylase C3348_RS07410 PF00929 Exonuclease C3348_RS07410 PF13307 Helicase C-terminal domain C3348_RS07415 PF00075 RNase H C3348_RS07420 PF00578 AhpC/TSA family C3348_RS07420 PF10417 C-terminal domain of 1-Cys peroxiredoxin C3348_RS07435 PF04294 VanW like protein C3348_RS07440 PF02954 Bacterial regulatory protein, Fis family C3348_RS07440 PF00158 Sigma-54 interaction domain C3348_RS07440 PF13188 PAS domain C3348_RS07450 PF03788 LrgA family C3348_RS07455 PF04172 LrgB-like family C3348_RS07460 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3348_RS07460 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3348_RS07470 PF00188 Cysteine-rich secretory protein family C3348_RS07475 PF01522 Polysaccharide deacetylase C3348_RS07475 PF13739 Deacetylase PdaC C3348_RS07475 PF11738 Protein of unknown function (DUF3298) C3348_RS07480 PF00117 Glutamine amidotransferase class-I C3348_RS07485 PF00425 chorismate binding enzyme C3348_RS07485 PF04715 Anthranilate synthase component I, N terminal region C3348_RS07490 PF01063 Amino-transferase class IV C3348_RS07500 PF01227 GTP cyclohydrolase I C3348_RS07505 PF00809 Pterin binding enzyme C3348_RS07510 PF02152 Dihydroneopterin aldolase C3348_RS07515 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) C3348_RS07520 PF18152 DAHP synthase ferredoxin-like domain C3348_RS07520 PF00793 DAHP synthetase I family C3348_RS07525 PF01807 CHC2 zinc finger C3348_RS07525 PF08275 DNA primase catalytic core, N-terminal domain C3348_RS07525 PF10410 DnaB-helicase binding domain of primase C3348_RS07530 PF03979 Sigma-70 factor, region 1.1 C3348_RS07530 PF04545 Sigma-70, region 4 C3348_RS07530 PF04539 Sigma-70 region 3 C3348_RS07530 PF04542 Sigma-70 region 2 C3348_RS07530 PF00140 Sigma-70 factor, region 1.2 C3348_RS07535 PF04816 tRNA (adenine(22)-N(1))-methyltransferase C3348_RS07540 PF01784 NIF3 (NGG1p interacting factor 3) C3348_RS07545 PF03358 NADPH-dependent FMN reductase C3348_RS07565 PF00155 Aminotransferase class I and II C3348_RS07565 PF00392 Bacterial regulatory proteins, gntR family C3348_RS07575 PF00072 Response regulator receiver domain C3348_RS07575 PF00486 Transcriptional regulatory protein, C terminal C3348_RS07580 PF00672 HAMP domain C3348_RS07580 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS07580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS07585 PF00005 ABC transporter C3348_RS07585 PF02687 FtsX-like permease family C3348_RS07585 PF12704 MacB-like periplasmic core domain C3348_RS07600 PF00144 Beta-lactamase C3348_RS07605 PF00581 Rhodanese-like domain C3348_RS07605 PF17773 UPF0176 acylphosphatase like domain C3348_RS07610 PF01061 ABC-2 type transporter C3348_RS07615 PF00005 ABC transporter C3348_RS07615 PF00664 ABC transporter transmembrane region C3348_RS07620 PF00005 ABC transporter C3348_RS07620 PF00664 ABC transporter transmembrane region C3348_RS07625 PF02915 Rubrerythrin C3348_RS07640 PF01738 Dienelactone hydrolase family C3348_RS07655 PF07664 Ferrous iron transport protein B C terminus C3348_RS07655 PF17910 FeoB cytosolic helical domain C3348_RS07655 PF02421 Ferrous iron transport protein B C3348_RS07655 PF07670 Nucleoside recognition C3348_RS07670 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS07675 PF00005 ABC transporter C3348_RS07710 PF12323 Helix-turn-helix domain C3348_RS07710 PF01385 Probable transposase C3348_RS07710 PF07282 Putative transposase DNA-binding domain C3348_RS07715 PF00005 ABC transporter C3348_RS07715 PF09383 NIL domain C3348_RS07720 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS07725 PF03180 NLPA lipoprotein C3348_RS07730 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS07730 PF16736 Single Cache-like C3348_RS07730 PF00989 PAS fold C3348_RS07730 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS07735 PF02245 Methylpurine-DNA glycosylase (MPG) C3348_RS07745 PF03807 NADP oxidoreductase coenzyme F420-dependent C3348_RS07745 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3348_RS07750 PF06207 Protein of unknown function (DUF1002) C3348_RS07760 PF00140 Sigma-70 factor, region 1.2 C3348_RS07760 PF03979 Sigma-70 factor, region 1.1 C3348_RS07760 PF04542 Sigma-70 region 2 C3348_RS07760 PF04539 Sigma-70 region 3 C3348_RS07760 PF04545 Sigma-70, region 4 C3348_RS07765 PF03023 Lipid II flippase MurJ C3348_RS07770 PF01791 DeoC/LacD family aldolase C3348_RS07780 PF00005 ABC transporter C3348_RS07790 PF01554 MatE C3348_RS07805 PF12801 4Fe-4S binding domain C3348_RS07805 PF04205 FMN-binding domain C3348_RS07835 PF02569 Pantoate-beta-alanine ligase C3348_RS07840 PF02548 Ketopantoate hydroxymethyltransferase C3348_RS07850 PF00563 EAL domain C3348_RS07850 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS07850 PF13426 PAS domain C3348_RS07860 PF13411 MerR HTH family regulatory protein C3348_RS07860 PF06445 GyrI-like small molecule binding domain C3348_RS07865 PF17910 FeoB cytosolic helical domain C3348_RS07865 PF02421 Ferrous iron transport protein B C3348_RS07865 PF07670 Nucleoside recognition C3348_RS07865 PF07664 Ferrous iron transport protein B C terminus C3348_RS07885 PF01479 S4 domain C3348_RS07885 PF00579 tRNA synthetases class I (W and Y) C3348_RS07890 PF01522 Polysaccharide deacetylase C3348_RS07890 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain C3348_RS07900 PF02915 Rubrerythrin C3348_RS07905 PF04015 Domain of unknown function (DUF362) C3348_RS07910 PF01979 Amidohydrolase family C3348_RS07915 PF02687 FtsX-like permease family C3348_RS07915 PF12704 MacB-like periplasmic core domain C3348_RS07920 PF00005 ABC transporter C3348_RS07920 PF12704 MacB-like periplasmic core domain C3348_RS07920 PF02687 FtsX-like permease family C3348_RS07930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS07935 PF00486 Transcriptional regulatory protein, C terminal C3348_RS07935 PF00072 Response regulator receiver domain C3348_RS07940 PF00005 ABC transporter C3348_RS07945 PF02687 FtsX-like permease family C3348_RS07960 PF00175 Oxidoreductase NAD-binding domain C3348_RS07960 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C3348_RS07965 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS07965 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3348_RS07965 PF13247 4Fe-4S dicluster domain C3348_RS07970 PF00563 EAL domain C3348_RS07970 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS07970 PF03707 Bacterial signalling protein N terminal repeat C3348_RS07975 PF00005 ABC transporter C3348_RS07980 PF02687 FtsX-like permease family C3348_RS07985 PF01554 MatE C3348_RS07995 PF02525 Flavodoxin-like fold C3348_RS08010 PF03006 Haemolysin-III related C3348_RS08020 PF13393 Histidyl-tRNA synthetase C3348_RS08025 PF01634 ATP phosphoribosyltransferase C3348_RS08030 PF00155 Aminotransferase class I and II C3348_RS08035 PF00475 Imidazoleglycerol-phosphate dehydratase C3348_RS08040 PF00117 Glutamine amidotransferase class-I C3348_RS08045 PF00977 Histidine biosynthesis protein C3348_RS08050 PF00977 Histidine biosynthesis protein C3348_RS08055 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase C3348_RS08055 PF01502 Phosphoribosyl-AMP cyclohydrolase C3348_RS08060 PF13520 Amino acid permease C3348_RS08065 PF01522 Polysaccharide deacetylase C3348_RS08075 PF08281 Sigma-70, region 4 C3348_RS08075 PF04542 Sigma-70 region 2 C3348_RS08080 PF11738 Protein of unknown function (DUF3298) C3348_RS08080 PF13739 Deacetylase PdaC C3348_RS08085 PF11738 Protein of unknown function (DUF3298) C3348_RS08085 PF13739 Deacetylase PdaC C3348_RS08090 PF02625 XdhC and CoxI family C3348_RS08090 PF13478 XdhC Rossmann domain C3348_RS08105 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain C3348_RS08105 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain C3348_RS08110 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3348_RS08110 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain C3348_RS08110 PF00205 Thiamine pyrophosphate enzyme, central domain C3348_RS08115 PF00589 Phage integrase family C3348_RS08115 PF14659 Phage integrase, N-terminal SAM-like domain C3348_RS08135 PF01381 Helix-turn-helix C3348_RS08165 PF01381 Helix-turn-helix C3348_RS08245 PF10668 Phage terminase small subunit C3348_RS08320 PF09393 Phage tail tube protein C3348_RS08390 PF10934 Protein of unknown function (DUF2634) C3348_RS08395 PF04865 Baseplate J-like protein C3348_RS08445 PF08460 Bacterial SH3 domain C3348_RS08445 PF05257 CHAP domain C3348_RS08445 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS08460 PF05067 Manganese containing catalase C3348_RS08465 PF03190 Protein of unknown function, DUF255 C3348_RS08495 PF12146 Serine aminopeptidase, S33 C3348_RS08500 PF01381 Helix-turn-helix C3348_RS08510 PF01476 LysM domain C3348_RS08510 PF06725 3D domain C3348_RS08520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3348_RS08520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3348_RS08520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3348_RS08520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3348_RS08525 PF03631 Virulence factor BrkB C3348_RS08530 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS08530 PF18698 Histidine kinase sensor domain C3348_RS08530 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS08530 PF00989 PAS fold C3348_RS08530 PF00672 HAMP domain C3348_RS08535 PF00742 Homoserine dehydrogenase C3348_RS08535 PF01842 ACT domain C3348_RS08535 PF03447 Homoserine dehydrogenase, NAD binding domain C3348_RS08545 PF00815 Histidinol dehydrogenase C3348_RS08550 PF00561 alpha/beta hydrolase fold C3348_RS08565 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3348_RS08575 PF00005 ABC transporter C3348_RS08580 PF02653 Branched-chain amino acid transport system / permease component C3348_RS08585 PF13407 Periplasmic binding protein domain C3348_RS08590 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3348_RS08590 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3348_RS08600 PF03814 Potassium-transporting ATPase A subunit C3348_RS08610 PF02669 K+-transporting ATPase, c chain C3348_RS08615 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS08620 PF00132 Bacterial transferase hexapeptide (six repeats) C3348_RS08630 PF00557 Metallopeptidase family M24 C3348_RS08630 PF02810 SEC-C motif C3348_RS08635 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain C3348_RS08640 PF01541 GIY-YIG catalytic domain C3348_RS08645 PF08543 Phosphomethylpyrimidine kinase C3348_RS08650 PF02110 Hydroxyethylthiazole kinase family C3348_RS08655 PF02581 Thiamine monophosphate synthase C3348_RS08660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS08670 PF00005 ABC transporter C3348_RS08670 PF13732 Domain of unknown function (DUF4162) C3348_RS08680 PF00392 Bacterial regulatory proteins, gntR family C3348_RS08685 PF08402 TOBE domain C3348_RS08685 PF00005 ABC transporter C3348_RS08710 PF01979 Amidohydrolase family C3348_RS08720 PF00005 ABC transporter C3348_RS08725 PF12679 ABC-2 family transporter protein C3348_RS08730 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS08730 PF03707 Bacterial signalling protein N terminal repeat C3348_RS08730 PF00563 EAL domain C3348_RS08735 PF00392 Bacterial regulatory proteins, gntR family C3348_RS08740 PF00005 ABC transporter C3348_RS08755 PF00924 Mechanosensitive ion channel C3348_RS08755 PF05552 Conserved TM helix C3348_RS08765 PF00258 Flavodoxin C3348_RS08765 PF00753 Metallo-beta-lactamase superfamily C3348_RS08770 PF00486 Transcriptional regulatory protein, C terminal C3348_RS08770 PF00072 Response regulator receiver domain C3348_RS08775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS08775 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS08780 PF01820 D-ala D-ala ligase N-terminus C3348_RS08780 PF07478 D-ala D-ala ligase C-terminus C3348_RS08785 PF02557 D-alanyl-D-alanine carboxypeptidase C3348_RS08790 PF01168 Alanine racemase, N-terminal domain C3348_RS08790 PF00842 Alanine racemase, C-terminal domain C3348_RS08790 PF01757 Acyltransferase family C3348_RS08805 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain C3348_RS08805 PF02777 Iron/manganese superoxide dismutases, C-terminal domain C3348_RS08810 PF13537 Glutamine amidotransferase domain C3348_RS08810 PF00733 Asparagine synthase C3348_RS08815 PF13180 PDZ domain C3348_RS08820 PF02342 TerD domain C3348_RS08825 PF02342 TerD domain C3348_RS08830 PF02342 TerD domain C3348_RS08835 PF00689 Cation transporting ATPase, C-terminus C3348_RS08835 PF00690 Cation transporter/ATPase, N-terminus C3348_RS08840 PF14266 Putative component of 'biosynthetic module' C3348_RS08845 PF05816 Toxic anion resistance protein (TelA) C3348_RS08875 PF05684 Protein of unknown function (DUF819) C3348_RS08880 PF01244 Membrane dipeptidase (Peptidase family M19) C3348_RS08885 PF01032 FecCD transport family C3348_RS08890 PF01032 FecCD transport family C3348_RS08895 PF00005 ABC transporter C3348_RS08900 PF01497 Periplasmic binding protein C3348_RS08905 PF00563 EAL domain C3348_RS08905 PF01590 GAF domain C3348_RS08905 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS08905 PF00360 Phytochrome region C3348_RS08910 PF02342 TerD domain C3348_RS08915 PF03180 NLPA lipoprotein C3348_RS08920 PF10437 Bacterial lipoate protein ligase C-terminus C3348_RS08920 PF03099 Biotin/lipoate A/B protein ligase family C3348_RS08925 PF03553 Na+/H+ antiporter family C3348_RS08940 PF02347 Glycine cleavage system P-protein C3348_RS08945 PF02347 Glycine cleavage system P-protein C3348_RS08955 PF06865 Pyrimidine/purine nucleoside phosphorylase C3348_RS08970 PF01979 Amidohydrolase family C3348_RS08985 PF01381 Helix-turn-helix C3348_RS08985 PF07883 Cupin domain C3348_RS08990 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS08995 PF03009 Glycerophosphoryl diester phosphodiesterase family C3348_RS09000 PF12464 Maltose acetyltransferase C3348_RS09000 PF14602 Hexapeptide repeat of succinyl-transferase C3348_RS09015 PF00005 ABC transporter C3348_RS09025 PF00072 Response regulator receiver domain C3348_RS09025 PF00486 Transcriptional regulatory protein, C terminal C3348_RS09030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS09030 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS09045 PF01638 HxlR-like helix-turn-helix C3348_RS09050 PF01470 Pyroglutamyl peptidase C3348_RS09080 PF08359 YsiA-like protein, C-terminal region C3348_RS09080 PF00440 Bacterial regulatory proteins, tetR family C3348_RS09085 PF01156 Inosine-uridine preferring nucleoside hydrolase C3348_RS09115 PF00072 Response regulator receiver domain C3348_RS09115 PF00486 Transcriptional regulatory protein, C terminal C3348_RS09120 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS09120 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS09125 PF00085 Thioredoxin C3348_RS09130 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS09135 PF01022 Bacterial regulatory protein, arsR family C3348_RS09150 PF03600 Citrate transporter C3348_RS09155 PF01235 Sodium:alanine symporter family C3348_RS09160 PF00885 6,7-dimethyl-8-ribityllumazine synthase C3348_RS09165 PF00925 GTP cyclohydrolase II C3348_RS09165 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase C3348_RS09170 PF00677 Lumazine binding domain C3348_RS09175 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3348_RS09175 PF01872 RibD C-terminal domain C3348_RS09180 PF00570 HRDC domain C3348_RS09180 PF16124 RecQ zinc-binding C3348_RS09180 PF00270 DEAD/DEAH box helicase C3348_RS09180 PF09382 RQC domain C3348_RS09180 PF00271 Helicase conserved C-terminal domain C3348_RS09185 PF01964 Radical SAM ThiC family C3348_RS09195 PF00581 Rhodanese-like domain C3348_RS09195 PF00899 ThiF family C3348_RS09200 PF05690 Thiazole biosynthesis protein ThiG C3348_RS09205 PF06968 Biotin and Thiamin Synthesis associated domain C3348_RS09205 PF04055 Radical SAM superfamily C3348_RS09215 PF03606 C4-dicarboxylate anaerobic carrier C3348_RS09225 PF12804 MobA-like NTP transferase domain C3348_RS09235 PF01906 Putative heavy-metal-binding C3348_RS09240 PF00994 Probable molybdopterin binding domain C3348_RS09245 PF06463 Molybdenum Cofactor Synthesis C C3348_RS09245 PF04055 Radical SAM superfamily C3348_RS09250 PF01967 MoaC family C3348_RS09290 PF01553 Acyltransferase C3348_RS09325 PF02690 Na+/Pi-cotransporter C3348_RS09340 PF10609 NUBPL iron-transfer P-loop NTPase C3348_RS09350 PF02607 B12 binding domain C3348_RS09350 PF02310 B12 binding domain C3348_RS09355 PF01208 Uroporphyrinogen decarboxylase (URO-D) C3348_RS09365 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS09370 PF01381 Helix-turn-helix C3348_RS09370 PF07883 Cupin domain C3348_RS09375 PF02447 GntP family permease C3348_RS09380 PF13426 PAS domain C3348_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS09380 PF13188 PAS domain C3348_RS09380 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS09380 PF00989 PAS fold C3348_RS09385 PF02954 Bacterial regulatory protein, Fis family C3348_RS09385 PF00072 Response regulator receiver domain C3348_RS09385 PF00158 Sigma-54 interaction domain C3348_RS09390 PF09338 Glycine/sarcosine/betaine reductase component B subunits C3348_RS09405 PF03616 Sodium/glutamate symporter C3348_RS09410 PF00962 Adenosine/AMP deaminase C3348_RS09415 PF12787 EcsC protein family C3348_RS09420 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component C3348_RS09425 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3348_RS09430 PF08486 Stage II sporulation protein C3348_RS09430 PF04122 Putative cell wall binding repeat 2 C3348_RS09440 PF00440 Bacterial regulatory proteins, tetR family C3348_RS09445 PF00005 ABC transporter C3348_RS09465 PF01327 Polypeptide deformylase C3348_RS09495 PF11208 Protein of unknown function (DUF2992) C3348_RS09500 PF06961 Protein of unknown function (DUF1294) C3348_RS09515 PF00293 NUDIX domain C3348_RS09525 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3348_RS09525 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3348_RS09540 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3348_RS09565 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3348_RS09570 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS09575 PF00005 ABC transporter C3348_RS09580 PF03960 ArsC family C3348_RS09590 PF02540 NAD synthase C3348_RS09595 PF02926 THUMP domain C3348_RS09595 PF01170 Putative RNA methylase family UPF0020 C3348_RS09605 PF00072 Response regulator receiver domain C3348_RS09605 PF00486 Transcriptional regulatory protein, C terminal C3348_RS09610 PF00672 HAMP domain C3348_RS09610 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS09610 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS09615 PF01416 tRNA pseudouridine synthase C3348_RS09620 PF00764 Arginosuccinate synthase C3348_RS09630 PF13411 MerR HTH family regulatory protein C3348_RS09630 PF07739 TipAS antibiotic-recognition domain C3348_RS09640 PF04239 Protein of unknown function (DUF421) C3348_RS09655 PF01370 NAD dependent epimerase/dehydratase family C3348_RS09675 PF13187 4Fe-4S dicluster domain C3348_RS09675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3348_RS09675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3348_RS09680 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3348_RS09680 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS09685 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS09685 PF03466 LysR substrate binding domain C3348_RS09690 PF02342 TerD domain C3348_RS09695 PF02342 TerD domain C3348_RS09700 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3348_RS09700 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3348_RS09715 PF00356 Bacterial regulatory proteins, lacI family C3348_RS09715 PF13407 Periplasmic binding protein domain C3348_RS09725 PF08244 Glycosyl hydrolases family 32 C terminal C3348_RS09725 PF00251 Glycosyl hydrolases family 32 N-terminal domain C3348_RS09730 PF00294 pfkB family carbohydrate kinase C3348_RS09745 PF07690 Major Facilitator Superfamily C3348_RS09750 PF07690 Major Facilitator Superfamily C3348_RS09775 PF00300 Histidine phosphatase superfamily (branch 1) C3348_RS09785 PF02224 Cytidylate kinase C3348_RS09790 PF01553 Acyltransferase C3348_RS09795 PF02401 LytB protein C3348_RS09805 PF13382 Adenine deaminase C-terminal domain C3348_RS09805 PF01979 Amidohydrolase family C3348_RS09810 PF00578 AhpC/TSA family C3348_RS09815 PF03883 Peroxide stress protein YaaA C3348_RS09820 PF00690 Cation transporter/ATPase, N-terminus C3348_RS09820 PF00689 Cation transporting ATPase, C-terminus C3348_RS09825 PF01053 Cys/Met metabolism PLP-dependent enzyme C3348_RS09830 PF04204 Homoserine O-succinyltransferase C3348_RS09835 PF01047 MarR family C3348_RS09840 PF17862 AAA+ lid domain C3348_RS09840 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS09840 PF01434 Peptidase family M41 C3348_RS09840 PF06480 FtsH Extracellular C3348_RS09845 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS09845 PF02702 Osmosensitive K+ channel His kinase sensor domain C3348_RS09845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS09845 PF13493 Domain of unknown function (DUF4118) C3348_RS09850 PF00072 Response regulator receiver domain C3348_RS09850 PF00486 Transcriptional regulatory protein, C terminal C3348_RS09855 PF01544 CorA-like Mg2+ transporter protein C3348_RS09865 PF18152 DAHP synthase ferredoxin-like domain C3348_RS09865 PF00793 DAHP synthetase I family C3348_RS09870 PF01761 3-dehydroquinate synthase C3348_RS09875 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) C3348_RS09880 PF01264 Chorismate synthase C3348_RS09885 PF00800 Prephenate dehydratase C3348_RS09885 PF01817 Chorismate mutase type II C3348_RS09890 PF08501 Shikimate dehydrogenase substrate binding domain C3348_RS09895 PF01202 Shikimate kinase C3348_RS09900 PF02153 Prephenate dehydrogenase C3348_RS09905 PF00563 EAL domain C3348_RS09905 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS09905 PF03707 Bacterial signalling protein N terminal repeat C3348_RS09910 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS09910 PF17158 Membrane-associated sensor, integral membrane domain C3348_RS09940 PF08241 Methyltransferase domain C3348_RS09945 PF04073 Aminoacyl-tRNA editing domain C3348_RS09970 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS09975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3348_RS10000 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS10010 PF00239 Resolvase, N terminal domain C3348_RS10010 PF02796 Helix-turn-helix domain of resolvase C3348_RS10020 PF00465 Iron-containing alcohol dehydrogenase C3348_RS10025 PF00936 BMC domain C3348_RS10030 PF10662 Ethanolamine utilisation - propanediol utilisation C3348_RS10035 PF00072 Response regulator receiver domain C3348_RS10035 PF03861 ANTAR domain C3348_RS10040 PF12282 Signal transduction histidine kinase C3348_RS10040 PF07568 Histidine kinase C3348_RS10040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS10045 PF06277 Ethanolamine utilisation protein EutA C3348_RS10050 PF06751 Ethanolamine ammonia lyase large subunit (EutB) C3348_RS10055 PF05985 Ethanolamine ammonia-lyase light chain (EutC) C3348_RS10060 PF00936 BMC domain C3348_RS10065 PF00936 BMC domain C3348_RS10070 PF00171 Aldehyde dehydrogenase family C3348_RS10070 PF00465 Iron-containing alcohol dehydrogenase C3348_RS10075 PF00936 BMC domain C3348_RS10085 PF06130 Phosphate propanoyltransferase C3348_RS10095 PF03319 Ethanolamine utilisation protein EutN/carboxysome C3348_RS10105 PF04346 Ethanolamine utilisation protein, EutH C3348_RS10110 PF06249 Ethanolamine utilisation protein EutQ C3348_RS10120 PF07687 Peptidase dimerisation domain C3348_RS10120 PF01546 Peptidase family M20/M25/M40 C3348_RS10125 PF03806 AbgT putative transporter family C3348_RS10130 PF00155 Aminotransferase class I and II C3348_RS10135 PF00005 ABC transporter C3348_RS10155 PF00717 Peptidase S24-like C3348_RS10155 PF01726 LexA DNA binding domain C3348_RS10160 PF02899 Phage integrase, N-terminal SAM-like domain C3348_RS10160 PF00589 Phage integrase family C3348_RS10175 PF04232 Stage V sporulation protein S (SpoVS) C3348_RS10180 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit C3348_RS10185 PF01039 Carboxyl transferase domain C3348_RS10185 PF17848 Acetyl-coA carboxylase zinc finger domain C3348_RS10190 PF02785 Biotin carboxylase C-terminal domain C3348_RS10190 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3348_RS10190 PF00289 Biotin carboxylase, N-terminal domain C3348_RS10195 PF00364 Biotin-requiring enzyme C3348_RS10215 PF02390 Putative methyltransferase C3348_RS10240 PF00005 ABC transporter C3348_RS10250 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS10250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS10255 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3348_RS10255 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3348_RS10260 PF13302 Acetyltransferase (GNAT) domain C3348_RS10265 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS10265 PF03466 LysR substrate binding domain C3348_RS10280 PF00005 ABC transporter C3348_RS10285 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS10285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS10285 PF07689 KaiB domain C3348_RS10290 PF00072 Response regulator receiver domain C3348_RS10290 PF00486 Transcriptional regulatory protein, C terminal C3348_RS10295 PF13486 Reductive dehalogenase subunit C3348_RS10295 PF12838 4Fe-4S dicluster domain C3348_RS10300 PF00072 Response regulator receiver domain C3348_RS10300 PF00486 Transcriptional regulatory protein, C terminal C3348_RS10305 PF16736 Single Cache-like C3348_RS10305 PF00989 PAS fold C3348_RS10305 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS10305 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS10310 PF02687 FtsX-like permease family C3348_RS10310 PF00005 ABC transporter C3348_RS10310 PF12704 MacB-like periplasmic core domain C3348_RS10345 PF04474 Protein of unknown function (DUF554) C3348_RS10350 PF04073 Aminoacyl-tRNA editing domain C3348_RS10365 PF01546 Peptidase family M20/M25/M40 C3348_RS10370 PF06838 Methionine gamma-lyase C3348_RS10375 PF17209 Hfq protein C3348_RS10385 PF08676 MutL C terminal dimerisation domain C3348_RS10385 PF01119 DNA mismatch repair protein, C-terminal domain C3348_RS10390 PF05190 MutS family domain IV C3348_RS10390 PF05192 MutS domain III C3348_RS10390 PF05188 MutS domain II C3348_RS10390 PF01624 MutS domain I C3348_RS10390 PF00488 MutS domain V C3348_RS10395 PF00005 ABC transporter C3348_RS10400 PF09084 NMT1/THI5 like C3348_RS10405 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS10420 PF01638 HxlR-like helix-turn-helix C3348_RS10430 PF07282 Putative transposase DNA-binding domain C3348_RS10430 PF01385 Probable transposase C3348_RS10430 PF12323 Helix-turn-helix domain C3348_RS10435 PF02567 Phenazine biosynthesis-like protein C3348_RS10440 PF02567 Phenazine biosynthesis-like protein C3348_RS10445 PF00293 NUDIX domain C3348_RS10455 PF01938 TRAM domain C3348_RS10455 PF00919 Uncharacterized protein family UPF0004 C3348_RS10455 PF04055 Radical SAM superfamily C3348_RS10460 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS10460 PF04122 Putative cell wall binding repeat 2 C3348_RS10470 PF17099 Tryptophan transporter TrpP C3348_RS10495 PF00313 'Cold-shock' DNA-binding domain C3348_RS10520 PF02627 Carboxymuconolactone decarboxylase family C3348_RS10540 PF01925 Sulfite exporter TauE/SafE C3348_RS10545 PF12833 Helix-turn-helix domain C3348_RS10550 PF13411 MerR HTH family regulatory protein C3348_RS10555 PF03328 HpcH/HpaI aldolase/citrate lyase family C3348_RS10560 PF00258 Flavodoxin C3348_RS10565 PF00082 Subtilase family C3348_RS10570 PF00920 Dehydratase family C3348_RS10580 PF04892 VanZ like family C3348_RS10600 PF12833 Helix-turn-helix domain C3348_RS10605 PF07690 Major Facilitator Superfamily C3348_RS10610 PF10431 C-terminal, D2-small domain, of ClpB protein C3348_RS10610 PF02861 Clp amino terminal domain, pathogenicity island component C3348_RS10610 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS10610 PF07724 AAA domain (Cdc48 subfamily) C3348_RS10610 PF17871 AAA lid domain C3348_RS10625 PF00392 Bacterial regulatory proteins, gntR family C3348_RS10630 PF00005 ABC transporter C3348_RS10645 PF07687 Peptidase dimerisation domain C3348_RS10645 PF01546 Peptidase family M20/M25/M40 C3348_RS10650 PF01177 Asp/Glu/Hydantoin racemase C3348_RS10660 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain C3348_RS10660 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain C3348_RS10665 PF00202 Aminotransferase class-III C3348_RS10670 PF00696 Amino acid kinase family C3348_RS10675 PF01960 ArgJ family C3348_RS10680 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3348_RS10680 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3348_RS10685 PF14268 YoaP-like C3348_RS10685 PF00583 Acetyltransferase (GNAT) family C3348_RS10695 PF00440 Bacterial regulatory proteins, tetR family C3348_RS10695 PF13305 Tetracyclin repressor-like, C-terminal domain C3348_RS10720 PF13443 Cro/C1-type HTH DNA-binding domain C3348_RS10735 PF01418 Helix-turn-helix domain, rpiR family C3348_RS10735 PF01380 SIS domain C3348_RS10740 PF06962 Putative rRNA methylase C3348_RS10745 PF01479 S4 domain C3348_RS10745 PF00849 RNA pseudouridylate synthase C3348_RS10750 PF01594 AI-2E family transporter C3348_RS10760 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain C3348_RS10760 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain C3348_RS10765 PF01842 ACT domain C3348_RS10765 PF00696 Amino acid kinase family C3348_RS10765 PF13840 ACT domain C3348_RS10795 PF00749 tRNA synthetases class I (E and Q), catalytic domain C3348_RS10795 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain C3348_RS10800 PF00781 Diacylglycerol kinase catalytic domain C3348_RS10830 PF00589 Phage integrase family C3348_RS10830 PF14659 Phage integrase, N-terminal SAM-like domain C3348_RS10840 PF12848 ABC transporter C3348_RS10840 PF00005 ABC transporter C3348_RS10865 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3348_RS10865 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C3348_RS10865 PF01799 [2Fe-2S] binding domain C3348_RS10875 PF00860 Permease family C3348_RS10890 PF01180 Dihydroorotate dehydrogenase C3348_RS10895 PF01979 Amidohydrolase family C3348_RS10900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3348_RS10900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C3348_RS10910 PF01799 [2Fe-2S] binding domain C3348_RS10910 PF00111 2Fe-2S iron-sulfur cluster binding domain C3348_RS10915 PF01979 Amidohydrolase family C3348_RS10920 PF01979 Amidohydrolase family C3348_RS10925 PF07687 Peptidase dimerisation domain C3348_RS10925 PF01546 Peptidase family M20/M25/M40 C3348_RS10930 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS10940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C3348_RS10940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3348_RS10945 PF00111 2Fe-2S iron-sulfur cluster binding domain C3348_RS10945 PF01799 [2Fe-2S] binding domain C3348_RS10950 PF01979 Amidohydrolase family C3348_RS10955 PF00860 Permease family C3348_RS10960 PF00860 Permease family C3348_RS10965 PF02954 Bacterial regulatory protein, Fis family C3348_RS10965 PF13188 PAS domain C3348_RS10965 PF00158 Sigma-54 interaction domain C3348_RS10975 PF07728 AAA domain (dynein-related subfamily) C3348_RS10975 PF12102 Domain of unknown function (DUF3578) C3348_RS10990 PF06177 QueT transporter C3348_RS11000 PF01799 [2Fe-2S] binding domain C3348_RS11000 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C3348_RS11000 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3348_RS11005 PF00111 2Fe-2S iron-sulfur cluster binding domain C3348_RS11005 PF01799 [2Fe-2S] binding domain C3348_RS11015 PF00999 Sodium/hydrogen exchanger family C3348_RS11035 PF00005 ABC transporter C3348_RS11040 PF00270 DEAD/DEAH box helicase C3348_RS11040 PF00271 Helicase conserved C-terminal domain C3348_RS11045 PF00860 Permease family C3348_RS11050 PF01554 MatE C3348_RS11060 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3348_RS11065 PF08220 DeoR-like helix-turn-helix domain C3348_RS11065 PF00455 DeoR C terminal sensor domain C3348_RS11075 PF00672 HAMP domain C3348_RS11075 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS11075 PF13426 PAS domain C3348_RS11075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS11080 PF00072 Response regulator receiver domain C3348_RS11080 PF00486 Transcriptional regulatory protein, C terminal C3348_RS11085 PF00403 Heavy-metal-associated domain C3348_RS11100 PF00679 Elongation factor G C-terminus C3348_RS11100 PF14492 Elongation Factor G, domain II C3348_RS11100 PF00009 Elongation factor Tu GTP binding domain C3348_RS11100 PF03144 Elongation factor Tu domain 2 C3348_RS11105 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS11110 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS11110 PF14821 Threonine synthase N terminus C3348_RS11115 PF08544 GHMP kinases C terminal C3348_RS11115 PF00288 GHMP kinases N terminal domain C3348_RS11145 PF00583 Acetyltransferase (GNAT) family C3348_RS11170 PF04551 GcpE protein C3348_RS11175 PF17820 PDZ domain C3348_RS11175 PF02163 Peptidase family M50 C3348_RS11180 PF13288 DXP reductoisomerase C-terminal domain C3348_RS11180 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase C3348_RS11180 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain C3348_RS11195 PF03707 Bacterial signalling protein N terminal repeat C3348_RS11195 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS11195 PF00563 EAL domain C3348_RS11210 PF01255 Putative undecaprenyl diphosphate synthase C3348_RS11220 PF01765 Ribosome recycling factor C3348_RS11225 PF00696 Amino acid kinase family C3348_RS11230 PF00889 Elongation factor TS C3348_RS11235 PF00318 Ribosomal protein S2 C3348_RS11240 PF07943 Penicillin-binding protein 5, C-terminal domain C3348_RS11240 PF00768 D-alanyl-D-alanine carboxypeptidase C3348_RS11255 PF02659 Putative manganese efflux pump C3348_RS11260 PF00488 MutS domain V C3348_RS11260 PF01713 Smr domain C3348_RS11265 PF01139 tRNA-splicing ligase RtcB C3348_RS11275 PF04294 VanW like protein C3348_RS11295 PF05343 M42 glutamyl aminopeptidase C3348_RS11305 PF01926 50S ribosome-binding GTPase C3348_RS11305 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3348_RS11310 PF04055 Radical SAM superfamily C3348_RS11310 PF06968 Biotin and Thiamin Synthesis associated domain C3348_RS11325 PF00202 Aminotransferase class-III C3348_RS11335 PF04892 VanZ like family C3348_RS11350 PF01411 tRNA synthetases class II (A) C3348_RS11350 PF02272 DHHA1 domain C3348_RS11350 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain C3348_RS11360 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain C3348_RS11360 PF00056 lactate/malate dehydrogenase, NAD binding domain C3348_RS11370 PF01641 SelR domain C3348_RS11370 PF01625 Peptide methionine sulfoxide reductase C3348_RS11375 PF01734 Patatin-like phospholipase C3348_RS11380 PF03063 Prismane/CO dehydrogenase family C3348_RS11400 PF00375 Sodium:dicarboxylate symporter family C3348_RS11405 PF00005 ABC transporter C3348_RS11410 PF07687 Peptidase dimerisation domain C3348_RS11410 PF01546 Peptidase family M20/M25/M40 C3348_RS11415 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3348_RS11420 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS11425 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS11430 PF00497 Bacterial extracellular solute-binding proteins, family 3 C3348_RS11435 PF13247 4Fe-4S dicluster domain C3348_RS11435 PF12800 4Fe-4S binding domain C3348_RS11440 PF00384 Molybdopterin oxidoreductase C3348_RS11440 PF01568 Molydopterin dinucleotide binding domain C3348_RS11440 PF04879 Molybdopterin oxidoreductase Fe4S4 domain C3348_RS11445 PF04434 SWIM zinc finger C3348_RS11445 PF00271 Helicase conserved C-terminal domain C3348_RS11445 PF00176 SNF2 family N-terminal domain C3348_RS11450 PF00561 alpha/beta hydrolase fold C3348_RS11455 PF03880 DbpA RNA binding domain C3348_RS11455 PF00270 DEAD/DEAH box helicase C3348_RS11455 PF00271 Helicase conserved C-terminal domain C3348_RS11480 PF13457 GW (Gly-Tryp) dipeptide domain C3348_RS11480 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase C3348_RS11485 PF03633 Glycosyl hydrolase family 65, C-terminal domain C3348_RS11485 PF03636 Glycosyl hydrolase family 65, N-terminal domain C3348_RS11485 PF03632 Glycosyl hydrolase family 65 central catalytic domain C3348_RS11490 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS11495 PF16657 Maltogenic Amylase, C-terminal domain C3348_RS11495 PF02903 Alpha amylase, N-terminal ig-like domain C3348_RS11495 PF00128 Alpha amylase, catalytic domain C3348_RS11500 PF02811 PHP domain C3348_RS11510 PF04122 Putative cell wall binding repeat 2 C3348_RS11510 PF08486 Stage II sporulation protein C3348_RS11515 PF00480 ROK family C3348_RS11520 PF00210 Ferritin-like domain C3348_RS11525 PF13607 Succinyl-CoA ligase like flavodoxin domain C3348_RS11525 PF13380 CoA binding domain C3348_RS11540 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3348_RS11540 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3348_RS11540 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3348_RS11550 PF00155 Aminotransferase class I and II C3348_RS11565 PF00440 Bacterial regulatory proteins, tetR family C3348_RS11570 PF00756 Putative esterase C3348_RS11575 PF01594 AI-2E family transporter C3348_RS11580 PF00171 Aldehyde dehydrogenase family C3348_RS11595 PF01926 50S ribosome-binding GTPase C3348_RS11595 PF13167 GTP-binding GTPase N-terminal C3348_RS11595 PF16360 GTP-binding GTPase Middle Region C3348_RS11600 PF00664 ABC transporter transmembrane region C3348_RS11600 PF00005 ABC transporter C3348_RS11605 PF00664 ABC transporter transmembrane region C3348_RS11605 PF00005 ABC transporter C3348_RS11620 PF00484 Carbonic anhydrase C3348_RS11640 PF01487 Type I 3-dehydroquinase C3348_RS11650 PF00132 Bacterial transferase hexapeptide (six repeats) C3348_RS11655 PF00919 Uncharacterized protein family UPF0004 C3348_RS11655 PF04055 Radical SAM superfamily C3348_RS11655 PF01938 TRAM domain C3348_RS11670 PF01226 Formate/nitrite transporter C3348_RS11675 PF13187 4Fe-4S dicluster domain C3348_RS11675 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain C3348_RS11675 PF01077 Nitrite and sulphite reductase 4Fe-4S domain C3348_RS11680 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B C3348_RS11680 PF00175 Oxidoreductase NAD-binding domain C3348_RS11685 PF17179 4Fe-4S dicluster domain C3348_RS11690 PF13545 Crp-like helix-turn-helix domain C3348_RS11690 PF00027 Cyclic nucleotide-binding domain C3348_RS11695 PF01418 Helix-turn-helix domain, rpiR family C3348_RS11695 PF01380 SIS domain C3348_RS11700 PF00480 ROK family C3348_RS11715 PF00474 Sodium:solute symporter family C3348_RS11720 PF00701 Dihydrodipicolinate synthetase family C3348_RS11725 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase C3348_RS11740 PF00563 EAL domain C3348_RS11740 PF01590 GAF domain C3348_RS11740 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS11740 PF00360 Phytochrome region C3348_RS11745 PF00152 tRNA synthetases class II (D, K and N) C3348_RS11745 PF01336 OB-fold nucleic acid binding domain C3348_RS11755 PF00082 Subtilase family C3348_RS11755 PF13860 FlgD Ig-like domain C3348_RS11755 PF02225 PA domain C3348_RS11755 PF05922 Peptidase inhibitor I9 C3348_RS11760 PF00082 Subtilase family C3348_RS11770 PF01434 Peptidase family M41 C3348_RS11770 PF06480 FtsH Extracellular C3348_RS11770 PF17862 AAA+ lid domain C3348_RS11770 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS11785 PF12544 Lysine-2,3-aminomutase C3348_RS11785 PF04055 Radical SAM superfamily C3348_RS11790 PF00155 Aminotransferase class I and II C3348_RS11790 PF00392 Bacterial regulatory proteins, gntR family C3348_RS11795 PF01177 Asp/Glu/Hydantoin racemase C3348_RS11815 PF07883 Cupin domain C3348_RS11820 PF00854 POT family C3348_RS11825 PF00557 Metallopeptidase family M24 C3348_RS11825 PF01321 Creatinase/Prolidase N-terminal domain C3348_RS11830 PF00854 POT family C3348_RS11850 PF00355 Rieske [2Fe-2S] domain C3348_RS11850 PF01266 FAD dependent oxidoreductase C3348_RS11860 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS11860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS11865 PF00294 pfkB family carbohydrate kinase C3348_RS11870 PF08279 HTH domain C3348_RS11870 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS11870 PF00874 PRD domain C3348_RS11870 PF05043 Mga helix-turn-helix domain C3348_RS11875 PF13350 Tyrosine phosphatase family C3348_RS11880 PF01594 AI-2E family transporter C3348_RS11890 PF01131 DNA topoisomerase C3348_RS11890 PF01751 Toprim domain C3348_RS11895 PF01235 Sodium:alanine symporter family C3348_RS11900 PF00596 Class II Aldolase and Adducin N-terminal domain C3348_RS11905 PF00596 Class II Aldolase and Adducin N-terminal domain C3348_RS11910 PF08240 Alcohol dehydrogenase GroES-like domain C3348_RS11910 PF00107 Zinc-binding dehydrogenase C3348_RS11915 PF03611 PTS system sugar-specific permease component C3348_RS11920 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS11925 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS11925 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS11925 PF02378 Phosphotransferase system, EIIC C3348_RS11930 PF00158 Sigma-54 interaction domain C3348_RS11930 PF00874 PRD domain C3348_RS11930 PF03610 PTS system fructose IIA component C3348_RS11950 PF00155 Aminotransferase class I and II C3348_RS11950 PF00392 Bacterial regulatory proteins, gntR family C3348_RS11955 PF03591 AzlC protein C3348_RS11965 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS11965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS11965 PF16736 Single Cache-like C3348_RS11965 PF00989 PAS fold C3348_RS11975 PF00072 Response regulator receiver domain C3348_RS11975 PF00486 Transcriptional regulatory protein, C terminal C3348_RS12010 PF01381 Helix-turn-helix C3348_RS12015 PF00665 Integrase core domain C3348_RS12015 PF13333 Integrase core domain C3348_RS12030 PF00313 'Cold-shock' DNA-binding domain C3348_RS12040 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS12045 PF08402 TOBE domain C3348_RS12045 PF00005 ABC transporter C3348_RS12060 PF00072 Response regulator receiver domain C3348_RS12060 PF00486 Transcriptional regulatory protein, C terminal C3348_RS12065 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS12065 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS12070 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3348_RS12070 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3348_RS12070 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3348_RS12070 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3348_RS12075 PF00834 Ribulose-phosphate 3 epimerase family C3348_RS12080 PF02502 Ribose/Galactose Isomerase C3348_RS12085 PF02779 Transketolase, pyrimidine binding domain C3348_RS12085 PF02780 Transketolase, C-terminal domain C3348_RS12090 PF00456 Transketolase, thiamine diphosphate binding domain C3348_RS12095 PF00107 Zinc-binding dehydrogenase C3348_RS12095 PF08240 Alcohol dehydrogenase GroES-like domain C3348_RS12100 PF08240 Alcohol dehydrogenase GroES-like domain C3348_RS12100 PF00107 Zinc-binding dehydrogenase C3348_RS12105 PF03611 PTS system sugar-specific permease component C3348_RS12110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS12120 PF03610 PTS system fructose IIA component C3348_RS12120 PF00158 Sigma-54 interaction domain C3348_RS12120 PF00874 PRD domain C3348_RS12125 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3348_RS12130 PF00156 Phosphoribosyl transferase domain C3348_RS12135 PF08125 Mannitol dehydrogenase C-terminal domain C3348_RS12135 PF01232 Mannitol dehydrogenase Rossmann domain C3348_RS12140 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS12145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS12145 PF00874 PRD domain C3348_RS12145 PF05043 Mga helix-turn-helix domain C3348_RS12145 PF08279 HTH domain C3348_RS12145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS12150 PF02378 Phosphotransferase system, EIIC C3348_RS12150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS12155 PF00571 CBS domain C3348_RS12155 PF00478 IMP dehydrogenase / GMP reductase domain C3348_RS12160 PF05816 Toxic anion resistance protein (TelA) C3348_RS12170 PF00465 Iron-containing alcohol dehydrogenase C3348_RS12175 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C3348_RS12175 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C3348_RS12185 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal C3348_RS12185 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal C3348_RS12190 PF00171 Aldehyde dehydrogenase family C3348_RS12195 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain C3348_RS12195 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain C3348_RS12200 PF02080 TrkA-C domain C3348_RS12200 PF06826 Predicted Permease Membrane Region C3348_RS12200 PF06826 Predicted Permease Membrane Region C3348_RS12200 PF02080 TrkA-C domain C3348_RS12205 PF03466 LysR substrate binding domain C3348_RS12205 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS12215 PF01321 Creatinase/Prolidase N-terminal domain C3348_RS12215 PF00557 Metallopeptidase family M24 C3348_RS12220 PF02504 Fatty acid synthesis protein C3348_RS12225 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C3348_RS12240 PF09338 Glycine/sarcosine/betaine reductase component B subunits C3348_RS12245 PF00085 Thioredoxin C3348_RS12250 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS12280 PF00005 ABC transporter C3348_RS12290 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS12330 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain C3348_RS12330 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain C3348_RS12335 PF00890 FAD binding domain C3348_RS12340 PF02445 Quinolinate synthetase A protein C3348_RS12345 PF02554 Carbon starvation protein CstA C3348_RS12360 PF01594 AI-2E family transporter C3348_RS12365 PF00293 NUDIX domain C3348_RS12375 PF00871 Acetokinase family C3348_RS12395 PF02954 Bacterial regulatory protein, Fis family C3348_RS12395 PF00158 Sigma-54 interaction domain C3348_RS12395 PF13426 PAS domain C3348_RS12400 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS12405 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS12420 PF01070 FMN-dependent dehydrogenase C3348_RS12430 PF05569 BlaR1 peptidase M56 C3348_RS12430 PF00905 Penicillin binding protein transpeptidase domain C3348_RS12435 PF03965 Penicillinase repressor C3348_RS12445 PF05569 BlaR1 peptidase M56 C3348_RS12445 PF00905 Penicillin binding protein transpeptidase domain C3348_RS12450 PF03965 Penicillinase repressor C3348_RS12460 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain C3348_RS12460 PF03484 tRNA synthetase B5 domain C3348_RS12460 PF01588 Putative tRNA binding domain C3348_RS12460 PF03147 Ferredoxin-fold anticodon binding domain C3348_RS12460 PF03483 B3/4 domain C3348_RS12465 PF00912 Transglycosylase C3348_RS12470 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3348_RS12470 PF00929 Exonuclease C3348_RS12470 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3348_RS12470 PF02811 PHP domain C3348_RS12470 PF14579 Helix-hairpin-helix motif C3348_RS12490 PF01171 PP-loop family C3348_RS12505 PF05067 Manganese containing catalase C3348_RS12510 PF08239 Bacterial SH3 domain C3348_RS12510 PF00877 NlpC/P60 family C3348_RS12510 PF01476 LysM domain C3348_RS12515 PF00692 dUTPase C3348_RS12520 PF01751 Toprim domain C3348_RS12520 PF01131 DNA topoisomerase C3348_RS12535 PF00873 AcrB/AcrD/AcrF family C3348_RS12545 PF13276 HTH-like domain C3348_RS12545 PF00665 Integrase core domain C3348_RS12545 PF13333 Integrase core domain C3348_RS12560 PF02896 PEP-utilising enzyme, TIM barrel domain C3348_RS12560 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain C3348_RS12560 PF00391 PEP-utilising enzyme, mobile domain C3348_RS12565 PF03618 Kinase/pyrophosphorylase C3348_RS12570 PF08279 HTH domain C3348_RS12570 PF00571 CBS domain C3348_RS12590 PF00874 PRD domain C3348_RS12590 PF05043 Mga helix-turn-helix domain C3348_RS12590 PF08279 HTH domain C3348_RS12590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS12595 PF03612 Sorbitol phosphotransferase enzyme II N-terminus C3348_RS12595 PF07663 Sorbitol phosphotransferase enzyme II C-terminus C3348_RS12600 PF03608 PTS system enzyme II sorbitol-specific factor C3348_RS12605 PF12833 Helix-turn-helix domain C3348_RS12615 PF01546 Peptidase family M20/M25/M40 C3348_RS12615 PF07687 Peptidase dimerisation domain C3348_RS12620 PF01235 Sodium:alanine symporter family C3348_RS12625 PF07690 Major Facilitator Superfamily C3348_RS12630 PF00155 Aminotransferase class I and II C3348_RS12635 PF01515 Phosphate acetyl/butaryl transferase C3348_RS12640 PF00871 Acetokinase family C3348_RS12655 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3348_RS12655 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3348_RS12655 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3348_RS12665 PF09339 IclR helix-turn-helix domain C3348_RS12665 PF01614 Bacterial transcriptional regulator C3348_RS12675 PF02092 Glycyl-tRNA synthetase beta subunit C3348_RS12675 PF05746 DALR anticodon binding domain C3348_RS12680 PF02091 Glycyl-tRNA synthetase alpha subunit C3348_RS12690 PF11967 Recombination protein O N terminal C3348_RS12690 PF02565 Recombination protein O C terminal C3348_RS12700 PF00571 CBS domain C3348_RS12700 PF01769 Divalent cation transporter C3348_RS12700 PF03448 MgtE intracellular N domain C3348_RS12705 PF01926 50S ribosome-binding GTPase C3348_RS12705 PF07650 KH domain C3348_RS12710 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region C3348_RS12715 PF01219 Prokaryotic diacylglycerol kinase C3348_RS12720 PF02130 Uncharacterized protein family UPF0054 C3348_RS12725 PF02562 PhoH-like protein C3348_RS12740 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus C3348_RS12740 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein C3348_RS12745 PF03073 TspO/MBR family C3348_RS12750 PF09424 Yqey-like protein C3348_RS12755 PF01165 Ribosomal protein S21 C3348_RS12760 PF01230 HIT domain C3348_RS12765 PF01938 TRAM domain C3348_RS12765 PF04055 Radical SAM superfamily C3348_RS12765 PF00919 Uncharacterized protein family UPF0004 C3348_RS12770 PF04452 RNA methyltransferase C3348_RS12780 PF18395 Cas3 C-terminal domain C3348_RS12780 PF00270 DEAD/DEAH box helicase C3348_RS12780 PF18019 HD domain C3348_RS12805 PF00005 ABC transporter C3348_RS12805 PF17912 MalK OB fold domain C3348_RS12805 PF03459 TOBE domain C3348_RS12810 PF17853 GGDEF-like domain C3348_RS12810 PF13556 PucR C-terminal helix-turn-helix domain C3348_RS12810 PF07905 Purine catabolism regulatory protein-like family C3348_RS12815 PF07690 Major Facilitator Superfamily C3348_RS12820 PF00480 ROK family C3348_RS12830 PF00684 DnaJ central domain C3348_RS12830 PF01556 DnaJ C terminal domain C3348_RS12830 PF00226 DnaJ domain C3348_RS12835 PF00012 Hsp70 protein C3348_RS12840 PF01025 GrpE C3348_RS12845 PF01628 HrcA protein C terminal domain C3348_RS12850 PF04055 Radical SAM superfamily C3348_RS12850 PF06969 HemN C-terminal domain C3348_RS12855 PF13520 Amino acid permease C3348_RS12860 PF01743 Poly A polymerase head domain C3348_RS12860 PF12627 Probable RNA and SrmB- binding site of polymerase A C3348_RS12860 PF13735 tRNA nucleotidyltransferase domain 2 putative C3348_RS12865 PF03144 Elongation factor Tu domain 2 C3348_RS12865 PF00009 Elongation factor Tu GTP binding domain C3348_RS12865 PF06421 GTP-binding protein LepA C-terminus C3348_RS12865 PF00679 Elongation factor G C-terminus C3348_RS12880 PF03418 Germination protease C3348_RS12895 PF01649 Ribosomal protein S20 C3348_RS12905 PF03772 Competence protein C3348_RS12905 PF13567 Domain of unknown function (DUF4131) C3348_RS12905 PF00753 Metallo-beta-lactamase superfamily C3348_RS12925 PF00899 ThiF family C3348_RS12930 PF01476 LysM domain C3348_RS12930 PF06725 3D domain C3348_RS12935 PF03167 Uracil DNA glycosylase superfamily C3348_RS12945 PF02424 ApbE family C3348_RS12950 PF00155 Aminotransferase class I and II C3348_RS12955 PF00557 Metallopeptidase family M24 C3348_RS12955 PF01321 Creatinase/Prolidase N-terminal domain C3348_RS12960 PF02378 Phosphotransferase system, EIIC C3348_RS12965 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS12970 PF02896 PEP-utilising enzyme, TIM barrel domain C3348_RS12970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS12970 PF00381 PTS HPr component phosphorylation site C3348_RS12970 PF00391 PEP-utilising enzyme, mobile domain C3348_RS12970 PF05524 PEP-utilising enzyme, N-terminal C3348_RS12975 PF08279 HTH domain C3348_RS12975 PF05043 Mga helix-turn-helix domain C3348_RS12975 PF00874 PRD domain C3348_RS12975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS12980 PF01546 Peptidase family M20/M25/M40 C3348_RS12985 PF01238 Phosphomannose isomerase type I C3348_RS12990 PF00672 HAMP domain C3348_RS12990 PF00989 PAS fold C3348_RS12990 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS12990 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS12990 PF18698 Histidine kinase sensor domain C3348_RS12995 PF09106 Elongation factor SelB, winged helix C3348_RS12995 PF09107 Elongation factor SelB, winged helix C3348_RS12995 PF00009 Elongation factor Tu GTP binding domain C3348_RS12995 PF09105 Elongation factor SelB, winged helix C3348_RS12995 PF03144 Elongation factor Tu domain 2 C3348_RS13000 PF12390 Selenocysteine synthase N terminal C3348_RS13000 PF03841 L-seryl-tRNA selenium transferase C3348_RS13015 PF07943 Penicillin-binding protein 5, C-terminal domain C3348_RS13015 PF00768 D-alanyl-D-alanine carboxypeptidase C3348_RS13025 PF00206 Lyase C3348_RS13025 PF14698 Argininosuccinate lyase C-terminal C3348_RS13035 PF00155 Aminotransferase class I and II C3348_RS13040 PF00689 Cation transporting ATPase, C-terminus C3348_RS13040 PF00690 Cation transporter/ATPase, N-terminus C3348_RS13045 PF02557 D-alanyl-D-alanine carboxypeptidase C3348_RS13050 PF00440 Bacterial regulatory proteins, tetR family C3348_RS13055 PF07690 Major Facilitator Superfamily C3348_RS13065 PF12833 Helix-turn-helix domain C3348_RS13065 PF02311 AraC-like ligand binding domain C3348_RS13070 PF02056 Family 4 glycosyl hydrolase C3348_RS13070 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3348_RS13075 PF00367 phosphotransferase system, EIIB C3348_RS13075 PF02378 Phosphotransferase system, EIIC C3348_RS13080 PF03123 CAT RNA binding domain C3348_RS13080 PF00874 PRD domain C3348_RS13085 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS13090 PF01042 Endoribonuclease L-PSP C3348_RS13095 PF13291 ACT domain C3348_RS13095 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS13100 PF00155 Aminotransferase class I and II C3348_RS13105 PF17763 Glutaminase/Asparaginase C-terminal domain C3348_RS13105 PF00710 Asparaginase, N-terminal C3348_RS13120 PF13603 Leucyl-tRNA synthetase, Domain 2 C3348_RS13120 PF09334 tRNA synthetases class I (M) C3348_RS13120 PF08264 Anticodon-binding domain of tRNA C3348_RS13120 PF00133 tRNA synthetases class I (I, L, M and V) C3348_RS13130 PF01966 HD domain C3348_RS13135 PF01467 Cytidylyltransferase-like C3348_RS13140 PF02631 RecX family C3348_RS13145 PF00128 Alpha amylase, catalytic domain C3348_RS13145 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) C3348_RS13145 PF02806 Alpha amylase, C-terminal all-beta domain C3348_RS13165 PF00266 Aminotransferase class-V C3348_RS13175 PF12704 MacB-like periplasmic core domain C3348_RS13175 PF00005 ABC transporter C3348_RS13175 PF02687 FtsX-like permease family C3348_RS13180 PF00672 HAMP domain C3348_RS13180 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS13180 PF18698 Histidine kinase sensor domain C3348_RS13180 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS13185 PF00486 Transcriptional regulatory protein, C terminal C3348_RS13185 PF00072 Response regulator receiver domain C3348_RS13190 PF00149 Calcineurin-like phosphoesterase C3348_RS13190 PF02872 5'-nucleotidase, C-terminal domain C3348_RS13200 PF12706 Beta-lactamase superfamily domain C3348_RS13205 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3348_RS13205 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS13210 PF00375 Sodium:dicarboxylate symporter family C3348_RS13220 PF03062 MBOAT, membrane-bound O-acyltransferase family C3348_RS13235 PF03425 Carbohydrate binding domain (family 11) C3348_RS13235 PF00404 Dockerin type I domain C3348_RS13235 PF02156 Glycosyl hydrolase family 26 C3348_RS13235 PF00150 Cellulase (glycosyl hydrolase family 5) C3348_RS13245 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS13250 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS13265 PF13580 SIS domain C3348_RS13270 PF03611 PTS system sugar-specific permease component C3348_RS13275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS13280 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS13290 PF01467 Cytidylyltransferase-like C3348_RS13300 PF17191 RecG wedge domain C3348_RS13300 PF00270 DEAD/DEAH box helicase C3348_RS13300 PF00271 Helicase conserved C-terminal domain C3348_RS13305 PF02734 DAK2 domain C3348_RS13305 PF13684 Dihydroxyacetone kinase family C3348_RS13310 PF03780 Asp23 family, cell envelope-related function C3348_RS13315 PF00830 Ribosomal L28 family C3348_RS13330 PF13411 MerR HTH family regulatory protein C3348_RS13330 PF07739 TipAS antibiotic-recognition domain C3348_RS13335 PF00874 PRD domain C3348_RS13335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS13335 PF05043 Mga helix-turn-helix domain C3348_RS13335 PF08279 HTH domain C3348_RS13340 PF08279 HTH domain C3348_RS13340 PF05043 Mga helix-turn-helix domain C3348_RS13340 PF00874 PRD domain C3348_RS13340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS13345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS13355 PF01074 Glycosyl hydrolases family 38 N-terminal domain C3348_RS13355 PF07748 Glycosyl hydrolases family 38 C-terminal domain C3348_RS13355 PF09261 Alpha mannosidase middle domain C3348_RS13360 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS13360 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS13365 PF00486 Transcriptional regulatory protein, C terminal C3348_RS13365 PF00072 Response regulator receiver domain C3348_RS13380 PF04263 Thiamin pyrophosphokinase, catalytic domain C3348_RS13380 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain C3348_RS13385 PF00834 Ribulose-phosphate 3 epimerase family C3348_RS13390 PF16745 RsgA N-terminal domain C3348_RS13390 PF03193 RsgA GTPase C3348_RS13400 PF03793 PASTA domain C3348_RS13400 PF00069 Protein kinase domain C3348_RS13410 PF04055 Radical SAM superfamily C3348_RS13415 PF01189 16S rRNA methyltransferase RsmB/F C3348_RS13415 PF01029 NusB family C3348_RS13420 PF04298 Putative neutral zinc metallopeptidase C3348_RS13430 PF00551 Formyl transferase C3348_RS13430 PF02911 Formyl transferase, C-terminal domain C3348_RS13435 PF01327 Polypeptide deformylase C3348_RS13440 PF00271 Helicase conserved C-terminal domain C3348_RS13440 PF18074 Primosomal protein N C-terminal domain C3348_RS13440 PF17764 3′ DNA-binding domain (3′BD) C3348_RS13440 PF04851 Type III restriction enzyme, res subunit C3348_RS13440 PF18319 PriA DNA helicase Cys-rich region (CRR) domain C3348_RS13445 PF04127 DNA / pantothenate metabolism flavoprotein C3348_RS13445 PF02441 Flavoprotein C3348_RS13450 PF01192 RNA polymerase Rpb6 C3348_RS13455 PF00625 Guanylate kinase C3348_RS13460 PF08340 Domain of unknown function (DUF1732) C3348_RS13460 PF03755 YicC-like family, N-terminal region C3348_RS13465 PF01678 Diaminopimelate epimerase C3348_RS13470 PF01212 Beta-eliminating lyase C3348_RS13475 PF05670 NFACT protein RNA binding domain C3348_RS13480 PF16326 ABC transporter C-terminal domain C3348_RS13480 PF12848 ABC transporter C3348_RS13480 PF00005 ABC transporter C3348_RS13485 PF00860 Permease family C3348_RS13490 PF00156 Phosphoribosyl transferase domain C3348_RS13495 PF01479 S4 domain C3348_RS13495 PF00849 RNA pseudouridylate synthase C3348_RS13500 PF01252 Signal peptidase (SPase) II C3348_RS13505 PF01522 Polysaccharide deacetylase C3348_RS13510 PF01258 Prokaryotic dksA/traR C4-type zinc finger C3348_RS13515 PF02554 Carbon starvation protein CstA C3348_RS13520 PF00072 Response regulator receiver domain C3348_RS13520 PF04397 LytTr DNA-binding domain C3348_RS13525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS13525 PF06580 Histidine kinase C3348_RS13525 PF07694 5TMR of 5TMR-LYT C3348_RS13540 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain C3348_RS13540 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 C3348_RS13540 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 C3348_RS13540 PF07691 PA14 domain C3348_RS13545 PF00579 tRNA synthetases class I (W and Y) C3348_RS13550 PF01048 Phosphorylase superfamily C3348_RS13555 PF13520 Amino acid permease C3348_RS13560 PF00557 Metallopeptidase family M24 C3348_RS13560 PF01321 Creatinase/Prolidase N-terminal domain C3348_RS13565 PF02645 Uncharacterised protein, DegV family COG1307 C3348_RS13570 PF08360 QacR-like protein, C-terminal region C3348_RS13570 PF00440 Bacterial regulatory proteins, tetR family C3348_RS13580 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3348_RS13580 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3348_RS13585 PF07282 Putative transposase DNA-binding domain C3348_RS13585 PF01385 Probable transposase C3348_RS13585 PF12323 Helix-turn-helix domain C3348_RS13595 PF08264 Anticodon-binding domain of tRNA C3348_RS13595 PF00133 tRNA synthetases class I (I, L, M and V) C3348_RS13600 PF05103 DivIVA protein C3348_RS13605 PF01479 S4 domain C3348_RS13605 PF17774 Putative RNA-binding domain in YlmH C3348_RS13615 PF04472 Cell division protein SepF C3348_RS13620 PF01168 Alanine racemase, N-terminal domain C3348_RS13635 PF05167 Uncharacterised ACR (DUF711) C3348_RS13650 PF09547 Stage IV sporulation protein A (spore_IV_A) C3348_RS13655 PF07690 Major Facilitator Superfamily C3348_RS13660 PF13520 Amino acid permease C3348_RS13665 PF01321 Creatinase/Prolidase N-terminal domain C3348_RS13665 PF00557 Metallopeptidase family M24 C3348_RS13670 PF00440 Bacterial regulatory proteins, tetR family C3348_RS13675 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus C3348_RS13675 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus C3348_RS13680 PF02660 Glycerol-3-phosphate acyltransferase C3348_RS13685 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal C3348_RS13685 PF01926 50S ribosome-binding GTPase C3348_RS13700 PF14045 YIEGIA protein C3348_RS13705 PF14045 YIEGIA protein C3348_RS13710 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS13710 PF00989 PAS fold C3348_RS13710 PF16736 Single Cache-like C3348_RS13710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS13715 PF00486 Transcriptional regulatory protein, C terminal C3348_RS13715 PF00072 Response regulator receiver domain C3348_RS13720 PF02578 Multi-copper polyphenol oxidoreductase laccase C3348_RS13725 PF03477 ATP cone domain C3348_RS13730 PF05239 PRC-barrel domain C3348_RS13735 PF04545 Sigma-70, region 4 C3348_RS13735 PF04539 Sigma-70 region 3 C3348_RS13735 PF04542 Sigma-70 region 2 C3348_RS13740 PF04545 Sigma-70, region 4 C3348_RS13740 PF04542 Sigma-70 region 2 C3348_RS13745 PF03419 Sporulation factor SpoIIGA C3348_RS13755 PF00091 Tubulin/FtsZ family, GTPase domain C3348_RS13755 PF12327 FtsZ family, C-terminal domain C3348_RS13760 PF06947 Protein of unknown function (DUF1290) C3348_RS13775 PF03799 Cell division protein FtsQ C3348_RS13775 PF08478 POTRA domain, FtsQ-type C3348_RS13780 PF03033 Glycosyltransferase family 28 N-terminal domain C3348_RS13780 PF04101 Glycosyltransferase family 28 C-terminal domain C3348_RS13785 PF01098 Cell cycle protein C3348_RS13790 PF08245 Mur ligase middle domain C3348_RS13790 PF02875 Mur ligase family, glutamate ligase domain C3348_RS13795 PF00953 Glycosyl transferase family 4 C3348_RS13795 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 C3348_RS13800 PF08245 Mur ligase middle domain C3348_RS13800 PF02875 Mur ligase family, glutamate ligase domain C3348_RS13800 PF01225 Mur ligase family, catalytic domain C3348_RS13805 PF03717 Penicillin-binding Protein dimerisation domain C3348_RS13805 PF03793 PASTA domain C3348_RS13805 PF00905 Penicillin binding protein transpeptidase domain C3348_RS13815 PF01795 MraW methylase family C3348_RS13820 PF01790 Prolipoprotein diacylglyceryl transferase C3348_RS13825 PF00675 Insulinase (Peptidase family M16) C3348_RS13825 PF05193 Peptidase M16 inactive domain C3348_RS13835 PF06071 Protein of unknown function (DUF933) C3348_RS13835 PF01926 50S ribosome-binding GTPase C3348_RS13840 PF03707 Bacterial signalling protein N terminal repeat C3348_RS13840 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS13840 PF00563 EAL domain C3348_RS13845 PF01225 Mur ligase family, catalytic domain C3348_RS13845 PF02875 Mur ligase family, glutamate ligase domain C3348_RS13845 PF08245 Mur ligase middle domain C3348_RS13850 PF12833 Helix-turn-helix domain C3348_RS13855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS13855 PF02378 Phosphotransferase system, EIIC C3348_RS13855 PF00367 phosphotransferase system, EIIB C3348_RS13860 PF00874 PRD domain C3348_RS13860 PF03123 CAT RNA binding domain C3348_RS13865 PF00999 Sodium/hydrogen exchanger family C3348_RS13870 PF00005 ABC transporter C3348_RS13870 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3348_RS13875 PF08352 Oligopeptide/dipeptide transporter, C-terminal region C3348_RS13875 PF00005 ABC transporter C3348_RS13880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle C3348_RS13885 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS13890 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS13890 PF12911 N-terminal TM domain of oligopeptide transport permease C C3348_RS13895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS13895 PF03466 LysR substrate binding domain C3348_RS13900 PF02803 Thiolase, C-terminal domain C3348_RS13900 PF00108 Thiolase, N-terminal domain C3348_RS13905 PF01144 Coenzyme A transferase C3348_RS13910 PF01144 Coenzyme A transferase C3348_RS13925 PF00188 Cysteine-rich secretory protein family C3348_RS13935 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase C3348_RS13935 PF10371 Domain of unknown function C3348_RS13935 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain C3348_RS13935 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg C3348_RS13935 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II C3348_RS13940 PF06130 Phosphate propanoyltransferase C3348_RS13970 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3348_RS13980 PF01569 PAP2 superfamily C3348_RS13985 PF00156 Phosphoribosyl transferase domain C3348_RS13990 PF00155 Aminotransferase class I and II C3348_RS14005 PF03590 Aspartate-ammonia ligase C3348_RS14010 PF00155 Aminotransferase class I and II C3348_RS14015 PF07687 Peptidase dimerisation domain C3348_RS14015 PF01546 Peptidase family M20/M25/M40 C3348_RS14025 PF07670 Nucleoside recognition C3348_RS14030 PF02954 Bacterial regulatory protein, Fis family C3348_RS14030 PF00158 Sigma-54 interaction domain C3348_RS14030 PF13426 PAS domain C3348_RS14040 PF05525 Branched-chain amino acid transport protein C3348_RS14050 PF00860 Permease family C3348_RS14055 PF01979 Amidohydrolase family C3348_RS14065 PF07690 Major Facilitator Superfamily C3348_RS14070 PF08501 Shikimate dehydrogenase substrate binding domain C3348_RS14070 PF18317 Shikimate 5'-dehydrogenase C-terminal domain C3348_RS14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS14075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3348_RS14085 PF03466 LysR substrate binding domain C3348_RS14085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS14095 PF01476 LysM domain C3348_RS14095 PF03734 L,D-transpeptidase catalytic domain C3348_RS14100 PF16363 GDP-mannose 4,6 dehydratase C3348_RS14105 PF00483 Nucleotidyl transferase C3348_RS14130 PF04203 Sortase domain C3348_RS14150 PF01522 Polysaccharide deacetylase C3348_RS14160 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS14165 PF00072 Response regulator receiver domain C3348_RS14165 PF00486 Transcriptional regulatory protein, C terminal C3348_RS14175 PF01522 Polysaccharide deacetylase C3348_RS14180 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase C3348_RS14180 PF04101 Glycosyltransferase family 28 C-terminal domain C3348_RS14185 PF00464 Serine hydroxymethyltransferase C3348_RS14205 PF02583 Metal-sensitive transcriptional repressor C3348_RS14215 PF00158 Sigma-54 interaction domain C3348_RS14215 PF02954 Bacterial regulatory protein, Fis family C3348_RS14215 PF13426 PAS domain C3348_RS14220 PF00155 Aminotransferase class I and II C3348_RS14225 PF03553 Na+/H+ antiporter family C3348_RS14235 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14235 PF04122 Putative cell wall binding repeat 2 C3348_RS14240 PF03466 LysR substrate binding domain C3348_RS14240 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS14245 PF00795 Carbon-nitrogen hydrolase C3348_RS14255 PF02938 GAD domain C3348_RS14255 PF00152 tRNA synthetases class II (D, K and N) C3348_RS14255 PF01336 OB-fold nucleic acid binding domain C3348_RS14260 PF03129 Anticodon binding domain C3348_RS14260 PF13393 Histidyl-tRNA synthetase C3348_RS14265 PF04055 Radical SAM superfamily C3348_RS14270 PF00753 Metallo-beta-lactamase superfamily C3348_RS14275 PF02580 D-Tyr-tRNA(Tyr) deacylase C3348_RS14280 PF13291 ACT domain C3348_RS14280 PF02824 TGS domain C3348_RS14280 PF04607 Region found in RelA / SpoT proteins C3348_RS14285 PF00156 Phosphoribosyl transferase domain C3348_RS14290 PF10141 Single-strand DNA-specific exonuclease, C terminal domain C3348_RS14290 PF17768 RecJ OB domain C3348_RS14290 PF02272 DHHA1 domain C3348_RS14290 PF01368 DHH family C3348_RS14295 PF03109 ABC1 family C3348_RS14300 PF00132 Bacterial transferase hexapeptide (six repeats) C3348_RS14330 PF05524 PEP-utilising enzyme, N-terminal C3348_RS14330 PF02896 PEP-utilising enzyme, TIM barrel domain C3348_RS14330 PF00391 PEP-utilising enzyme, mobile domain C3348_RS14335 PF00381 PTS HPr component phosphorylation site C3348_RS14345 PF07669 Eco57I restriction-modification methylase C3348_RS14345 PF12950 TaqI-like C-terminal specificity domain C3348_RS14355 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS14355 PF00563 EAL domain C3348_RS14355 PF03707 Bacterial signalling protein N terminal repeat C3348_RS14360 PF08239 Bacterial SH3 domain C3348_RS14360 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14365 PF01255 Putative undecaprenyl diphosphate synthase C3348_RS14380 PF03816 Cell envelope-related transcriptional attenuator domain C3348_RS14385 PF03816 Cell envelope-related transcriptional attenuator domain C3348_RS14390 PF02638 Glycosyl hydrolase-like 10 C3348_RS14395 PF00877 NlpC/P60 family C3348_RS14400 PF02719 Polysaccharide biosynthesis protein C3348_RS14405 PF13439 Glycosyltransferase Family 4 C3348_RS14405 PF00534 Glycosyl transferases group 1 C3348_RS14410 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain C3348_RS14410 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain C3348_RS14410 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain C3348_RS14415 PF00535 Glycosyl transferase family 2 C3348_RS14420 PF00535 Glycosyl transferase family 2 C3348_RS14425 PF00535 Glycosyl transferase family 2 C3348_RS14430 PF00535 Glycosyl transferase family 2 C3348_RS14430 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase C3348_RS14435 PF00535 Glycosyl transferase family 2 C3348_RS14450 PF00483 Nucleotidyl transferase C3348_RS14450 PF01050 Mannose-6-phosphate isomerase C3348_RS14455 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III C3348_RS14455 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I C3348_RS14455 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II C3348_RS14455 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain C3348_RS14460 PF03023 Lipid II flippase MurJ C3348_RS14465 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14465 PF04122 Putative cell wall binding repeat 2 C3348_RS14470 PF02397 Bacterial sugar transferase C3348_RS14475 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14475 PF08239 Bacterial SH3 domain C3348_RS14490 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14490 PF04122 Putative cell wall binding repeat 2 C3348_RS14500 PF04138 GtrA-like protein C3348_RS14505 PF04122 Putative cell wall binding repeat 2 C3348_RS14505 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14520 PF07517 SecA DEAD-like domain C3348_RS14520 PF07516 SecA Wing and Scaffold domain C3348_RS14520 PF01043 SecA preprotein cross-linking domain C3348_RS14555 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS14555 PF04122 Putative cell wall binding repeat 2 C3348_RS14570 PF02699 Preprotein translocase subunit C3348_RS14575 PF01702 Queuine tRNA-ribosyltransferase C3348_RS14585 PF02547 Queuosine biosynthesis protein C3348_RS14590 PF05496 Holliday junction DNA helicase RuvB P-loop domain C3348_RS14590 PF05491 RuvB C-terminal winged helix domain C3348_RS14590 PF17864 RuvB AAA lid domain C3348_RS14595 PF07499 RuvA, C-terminal domain C3348_RS14595 PF01330 RuvA N terminal domain C3348_RS14600 PF02075 Crossover junction endodeoxyribonuclease RuvC C3348_RS14625 PF02447 GntP family permease C3348_RS14630 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase C3348_RS14630 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase C3348_RS14635 PF00392 Bacterial regulatory proteins, gntR family C3348_RS14635 PF07729 FCD domain C3348_RS14650 PF00664 ABC transporter transmembrane region C3348_RS14650 PF00005 ABC transporter C3348_RS14655 PF00005 ABC transporter C3348_RS14655 PF00664 ABC transporter transmembrane region C3348_RS14665 PF01872 RibD C-terminal domain C3348_RS14675 PF13276 HTH-like domain C3348_RS14675 PF00665 Integrase core domain C3348_RS14675 PF13333 Integrase core domain C3348_RS14685 PF07670 Nucleoside recognition C3348_RS14690 PF07670 Nucleoside recognition C3348_RS14695 PF01546 Peptidase family M20/M25/M40 C3348_RS14695 PF07687 Peptidase dimerisation domain C3348_RS14715 PF07282 Putative transposase DNA-binding domain C3348_RS14715 PF01385 Probable transposase C3348_RS14715 PF12323 Helix-turn-helix domain C3348_RS14730 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3348_RS14730 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS14740 PF00155 Aminotransferase class I and II C3348_RS14745 PF00892 EamA-like transporter family C3348_RS14750 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain C3348_RS14760 PF01545 Cation efflux family C3348_RS14760 PF16916 Dimerisation domain of Zinc Transporter C3348_RS14770 PF00690 Cation transporter/ATPase, N-terminus C3348_RS14770 PF00689 Cation transporting ATPase, C-terminus C3348_RS14775 PF00464 Serine hydroxymethyltransferase C3348_RS14780 PF03806 AbgT putative transporter family C3348_RS14785 PF07687 Peptidase dimerisation domain C3348_RS14785 PF01546 Peptidase family M20/M25/M40 C3348_RS14795 PF08769 Sporulation initiation factor Spo0A C terminal C3348_RS14795 PF00072 Response regulator receiver domain C3348_RS14805 PF02403 Seryl-tRNA synthetase N-terminal domain C3348_RS14805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) C3348_RS14810 PF07969 Amidohydrolase family C3348_RS14815 PF00795 Carbon-nitrogen hydrolase C3348_RS14820 PF08240 Alcohol dehydrogenase GroES-like domain C3348_RS14820 PF00107 Zinc-binding dehydrogenase C3348_RS14830 PF02915 Rubrerythrin C3348_RS14835 PF13171 Protein of unknown function (DUF4004) C3348_RS14850 PF00266 Aminotransferase class-V C3348_RS14850 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS14855 PF00455 DeoR C terminal sensor domain C3348_RS14855 PF08220 DeoR-like helix-turn-helix domain C3348_RS14860 PF00550 Phosphopantetheine attachment site C3348_RS14865 PF03062 MBOAT, membrane-bound O-acyltransferase family C3348_RS14870 PF00501 AMP-binding enzyme C3348_RS14870 PF13193 AMP-binding enzyme C-terminal domain C3348_RS14880 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3348_RS14880 PF02894 Oxidoreductase family, C-terminal alpha/beta domain C3348_RS14890 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS14895 PF00571 CBS domain C3348_RS14895 PF01595 Cyclin M transmembrane N-terminal domain C3348_RS14895 PF03471 Transporter associated domain C3348_RS14900 PF07969 Amidohydrolase family C3348_RS14920 PF00989 PAS fold C3348_RS14920 PF00158 Sigma-54 interaction domain C3348_RS14920 PF02954 Bacterial regulatory protein, Fis family C3348_RS14925 PF00561 alpha/beta hydrolase fold C3348_RS14925 PF08386 TAP-like protein C3348_RS14935 PF02687 FtsX-like permease family C3348_RS14940 PF00005 ABC transporter C3348_RS14950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS14955 PF00072 Response regulator receiver domain C3348_RS14955 PF00486 Transcriptional regulatory protein, C terminal C3348_RS14960 PF01523 Putative modulator of DNA gyrase C3348_RS14965 PF01523 Putative modulator of DNA gyrase C3348_RS14970 PF01266 FAD dependent oxidoreductase C3348_RS14975 PF02954 Bacterial regulatory protein, Fis family C3348_RS14975 PF00158 Sigma-54 interaction domain C3348_RS14975 PF13426 PAS domain C3348_RS14980 PF03812 2-keto-3-deoxygluconate permease C3348_RS14990 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C3348_RS15000 PF01554 MatE C3348_RS15005 PF00005 ABC transporter C3348_RS15010 PF01032 FecCD transport family C3348_RS15015 PF01032 FecCD transport family C3348_RS15030 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3348_RS15035 PF04794 YdjC-like protein C3348_RS15040 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3348_RS15040 PF02056 Family 4 glycosyl hydrolase C3348_RS15045 PF02378 Phosphotransferase system, EIIC C3348_RS15050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15055 PF07702 UTRA domain C3348_RS15055 PF00392 Bacterial regulatory proteins, gntR family C3348_RS15060 PF01554 MatE C3348_RS15065 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS15070 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS15075 PF00005 ABC transporter C3348_RS15075 PF08402 TOBE domain C3348_RS15085 PF01813 ATP synthase subunit D C3348_RS15090 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3348_RS15090 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3348_RS15095 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3348_RS15095 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3348_RS15095 PF16886 ATPsynthase alpha/beta subunit N-term extension C3348_RS15100 PF01990 ATP synthase (F/14-kDa) subunit C3348_RS15110 PF01991 ATP synthase (E/31 kDa) subunit C3348_RS15115 PF00137 ATP synthase subunit C C3348_RS15120 PF01496 V-type ATPase 116kDa subunit family C3348_RS15145 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS15145 PF03707 Bacterial signalling protein N terminal repeat C3348_RS15145 PF00563 EAL domain C3348_RS15150 PF00465 Iron-containing alcohol dehydrogenase C3348_RS15150 PF00171 Aldehyde dehydrogenase family C3348_RS15160 PF02441 Flavoprotein C3348_RS15170 PF00501 AMP-binding enzyme C3348_RS15170 PF13193 AMP-binding enzyme C-terminal domain C3348_RS15175 PF00108 Thiolase, N-terminal domain C3348_RS15175 PF02803 Thiolase, C-terminal domain C3348_RS15180 PF02632 BioY family C3348_RS15195 PF09827 CRISPR associated protein Cas2 C3348_RS15200 PF01867 CRISPR associated protein Cas1 C3348_RS15210 PF18019 HD domain C3348_RS15210 PF00271 Helicase conserved C-terminal domain C3348_RS15210 PF00270 DEAD/DEAH box helicase C3348_RS15240 PF02687 FtsX-like permease family C3348_RS15245 PF00005 ABC transporter C3348_RS15250 PF02673 Bacitracin resistance protein BacA C3348_RS15255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS15260 PF00072 Response regulator receiver domain C3348_RS15260 PF00486 Transcriptional regulatory protein, C terminal C3348_RS15270 PF00005 ABC transporter C3348_RS15275 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS15290 PF00268 Ribonucleotide reductase, small chain C3348_RS15295 PF08343 Ribonucleotide reductase N-terminal C3348_RS15295 PF00317 Ribonucleotide reductase, all-alpha domain C3348_RS15295 PF02867 Ribonucleotide reductase, barrel domain C3348_RS15305 PF00005 ABC transporter C3348_RS15310 PF01032 FecCD transport family C3348_RS15315 PF12323 Helix-turn-helix domain C3348_RS15315 PF01385 Probable transposase C3348_RS15315 PF07282 Putative transposase DNA-binding domain C3348_RS15330 PF01032 FecCD transport family C3348_RS15340 PF00701 Dihydrodipicolinate synthetase family C3348_RS15345 PF01557 Fumarylacetoacetate (FAA) hydrolase family C3348_RS15350 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus C3348_RS15360 PF03812 2-keto-3-deoxygluconate permease C3348_RS15370 PF00465 Iron-containing alcohol dehydrogenase C3348_RS15375 PF03734 L,D-transpeptidase catalytic domain C3348_RS15385 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain C3348_RS15385 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS15390 PF02683 Cytochrome C biogenesis protein transmembrane region C3348_RS15395 PF01638 HxlR-like helix-turn-helix C3348_RS15400 PF09261 Alpha mannosidase middle domain C3348_RS15400 PF07748 Glycosyl hydrolases family 38 C-terminal domain C3348_RS15400 PF01074 Glycosyl hydrolases family 38 N-terminal domain C3348_RS15410 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS15420 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS15420 PF05043 Mga helix-turn-helix domain C3348_RS15420 PF08279 HTH domain C3348_RS15420 PF00874 PRD domain C3348_RS15425 PF06800 Sugar transport protein C3348_RS15460 PF08331 Domain of unknown function (DUF1730) C3348_RS15470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS15475 PF01380 SIS domain C3348_RS15475 PF00571 CBS domain C3348_RS15480 PF00155 Aminotransferase class I and II C3348_RS15485 PF00367 phosphotransferase system, EIIB C3348_RS15485 PF02378 Phosphotransferase system, EIIC C3348_RS15490 PF03123 CAT RNA binding domain C3348_RS15490 PF00874 PRD domain C3348_RS15495 PF00266 Aminotransferase class-V C3348_RS15500 PF00085 Thioredoxin C3348_RS15510 PF02567 Phenazine biosynthesis-like protein C3348_RS15515 PF00854 POT family C3348_RS15530 PF10431 C-terminal, D2-small domain, of ClpB protein C3348_RS15530 PF02861 Clp amino terminal domain, pathogenicity island component C3348_RS15530 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS15530 PF07724 AAA domain (Cdc48 subfamily) C3348_RS15530 PF17871 AAA lid domain C3348_RS15540 PF00561 alpha/beta hydrolase fold C3348_RS15555 PF01418 Helix-turn-helix domain, rpiR family C3348_RS15555 PF01380 SIS domain C3348_RS15560 PF01869 BadF/BadG/BcrA/BcrD ATPase family C3348_RS15565 PF13580 SIS domain C3348_RS15575 PF02378 Phosphotransferase system, EIIC C3348_RS15590 PF03702 Anhydro-N-acetylmuramic acid kinase C3348_RS15600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS15605 PF00486 Transcriptional regulatory protein, C terminal C3348_RS15605 PF00072 Response regulator receiver domain C3348_RS15615 PF00005 ABC transporter C3348_RS15625 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS15635 PF02056 Family 4 glycosyl hydrolase C3348_RS15635 PF11975 Family 4 glycosyl hydrolase C-terminal domain C3348_RS15640 PF00367 phosphotransferase system, EIIB C3348_RS15640 PF02378 Phosphotransferase system, EIIC C3348_RS15655 PF01261 Xylose isomerase-like TIM barrel C3348_RS15660 PF00370 FGGY family of carbohydrate kinases, N-terminal domain C3348_RS15660 PF02782 FGGY family of carbohydrate kinases, C-terminal domain C3348_RS15665 PF00480 ROK family C3348_RS15675 PF03610 PTS system fructose IIA component C3348_RS15675 PF03830 PTS system sorbose subfamily IIB component C3348_RS15680 PF03613 PTS system mannose/fructose/sorbose family IID component C3348_RS15685 PF03609 PTS system sorbose-specific iic component C3348_RS15690 PF01055 Glycosyl hydrolases family 31 C3348_RS15710 PF00271 Helicase conserved C-terminal domain C3348_RS15710 PF08463 EcoEI R protein C-terminal C3348_RS15710 PF04851 Type III restriction enzyme, res subunit C3348_RS15710 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) C3348_RS15735 PF02384 N-6 DNA Methylase C3348_RS15740 PF01116 Fructose-bisphosphate aldolase class-II C3348_RS15745 PF02378 Phosphotransferase system, EIIC C3348_RS15745 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS15745 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15750 PF00294 pfkB family carbohydrate kinase C3348_RS15765 PF00232 Glycosyl hydrolase family 1 C3348_RS15775 PF02378 Phosphotransferase system, EIIC C3348_RS15780 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15785 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15785 PF02378 Phosphotransferase system, EIIC C3348_RS15785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS15790 PF02595 Glycerate kinase family C3348_RS15795 PF01074 Glycosyl hydrolases family 38 N-terminal domain C3348_RS15795 PF07748 Glycosyl hydrolases family 38 C-terminal domain C3348_RS15795 PF09261 Alpha mannosidase middle domain C3348_RS15800 PF02378 Phosphotransferase system, EIIC C3348_RS15800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS15800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS15805 PF01418 Helix-turn-helix domain, rpiR family C3348_RS15805 PF01380 SIS domain C3348_RS15810 PF04794 YdjC-like protein C3348_RS15815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS15815 PF00367 phosphotransferase system, EIIB C3348_RS15815 PF02378 Phosphotransferase system, EIIC C3348_RS15820 PF00392 Bacterial regulatory proteins, gntR family C3348_RS15820 PF07702 UTRA domain C3348_RS15825 PF16657 Maltogenic Amylase, C-terminal domain C3348_RS15825 PF00128 Alpha amylase, catalytic domain C3348_RS15830 PF13520 Amino acid permease C3348_RS15835 PF07722 Peptidase C26 C3348_RS15840 PF02954 Bacterial regulatory protein, Fis family C3348_RS15840 PF13426 PAS domain C3348_RS15840 PF00158 Sigma-54 interaction domain C3348_RS15850 PF00232 Glycosyl hydrolase family 1 C3348_RS15855 PF00367 phosphotransferase system, EIIB C3348_RS15855 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS15855 PF02378 Phosphotransferase system, EIIC C3348_RS15860 PF00874 PRD domain C3348_RS15860 PF03123 CAT RNA binding domain C3348_RS15870 PF03606 C4-dicarboxylate anaerobic carrier C3348_RS15875 PF00367 phosphotransferase system, EIIB C3348_RS15875 PF02378 Phosphotransferase system, EIIC C3348_RS15880 PF01546 Peptidase family M20/M25/M40 C3348_RS15885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS15895 PF00465 Iron-containing alcohol dehydrogenase C3348_RS15900 PF00923 Transaldolase/Fructose-6-phosphate aldolase C3348_RS15905 PF05043 Mga helix-turn-helix domain C3348_RS15905 PF00874 PRD domain C3348_RS15905 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS15905 PF08279 HTH domain C3348_RS15910 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 C3348_RS15910 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) C3348_RS15915 PF00834 Ribulose-phosphate 3 epimerase family C3348_RS15920 PF00365 Phosphofructokinase C3348_RS15940 PF01385 Probable transposase C3348_RS15940 PF07282 Putative transposase DNA-binding domain C3348_RS15940 PF12323 Helix-turn-helix domain C3348_RS15950 PF07687 Peptidase dimerisation domain C3348_RS15950 PF01546 Peptidase family M20/M25/M40 C3348_RS15955 PF01546 Peptidase family M20/M25/M40 C3348_RS15965 PF00232 Glycosyl hydrolase family 1 C3348_RS15970 PF02378 Phosphotransferase system, EIIC C3348_RS15970 PF00367 phosphotransferase system, EIIB C3348_RS15970 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS15985 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase C3348_RS16035 PF00724 NADH:flavin oxidoreductase / NADH oxidase family C3348_RS16035 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS16040 PF07690 Major Facilitator Superfamily C3348_RS16045 PF03551 Transcriptional regulator PadR-like family C3348_RS16045 PF10400 Virulence activator alpha C-term C3348_RS16055 PF01022 Bacterial regulatory protein, arsR family C3348_RS16060 PF00881 Nitroreductase family C3348_RS16065 PF00232 Glycosyl hydrolase family 1 C3348_RS16070 PF02378 Phosphotransferase system, EIIC C3348_RS16070 PF00367 phosphotransferase system, EIIB C3348_RS16070 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 C3348_RS16075 PF03123 CAT RNA binding domain C3348_RS16075 PF00874 PRD domain C3348_RS16080 PF02378 Phosphotransferase system, EIIC C3348_RS16080 PF00367 phosphotransferase system, EIIB C3348_RS16085 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS16090 PF03636 Glycosyl hydrolase family 65, N-terminal domain C3348_RS16090 PF03632 Glycosyl hydrolase family 65 central catalytic domain C3348_RS16090 PF03633 Glycosyl hydrolase family 65, C-terminal domain C3348_RS16095 PF00232 Glycosyl hydrolase family 1 C3348_RS16100 PF12833 Helix-turn-helix domain C3348_RS16105 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS16105 PF02378 Phosphotransferase system, EIIC C3348_RS16105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS16110 PF08279 HTH domain C3348_RS16110 PF05043 Mga helix-turn-helix domain C3348_RS16110 PF00874 PRD domain C3348_RS16110 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS16110 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS16115 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 C3348_RS16115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS16120 PF01116 Fructose-bisphosphate aldolase class-II C3348_RS16125 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS16130 PF00005 ABC transporter C3348_RS16130 PF08402 TOBE domain C3348_RS16160 PF01965 DJ-1/PfpI family C3348_RS16210 PF13333 Integrase core domain C3348_RS16210 PF00665 Integrase core domain C3348_RS16240 PF18395 Cas3 C-terminal domain C3348_RS16240 PF18019 HD domain C3348_RS16240 PF00270 DEAD/DEAH box helicase C3348_RS16275 PF03796 DnaB-like helicase C terminal domain C3348_RS16275 PF00772 DnaB-like helicase N terminal domain C3348_RS16295 PF01381 Helix-turn-helix C3348_RS16315 PF14659 Phage integrase, N-terminal SAM-like domain C3348_RS16315 PF00589 Phage integrase family C3348_RS16350 PF01668 SmpB protein C3348_RS16375 PF13732 Domain of unknown function (DUF4162) C3348_RS16375 PF00005 ABC transporter C3348_RS16385 PF00773 RNB domain C3348_RS16385 PF08206 Ribonuclease B OB domain C3348_RS16385 PF17876 Cold shock domain C3348_RS16385 PF00575 S1 RNA binding domain C3348_RS16400 PF01161 Phosphatidylethanolamine-binding protein C3348_RS16430 PF03952 Enolase, N-terminal domain C3348_RS16430 PF00113 Enolase, C-terminal TIM barrel domain C3348_RS16435 PF01676 Metalloenzyme superfamily C3348_RS16435 PF06415 BPG-independent PGAM N-terminus (iPGM_N) C3348_RS16440 PF00121 Triosephosphate isomerase C3348_RS16445 PF00162 Phosphoglycerate kinase C3348_RS16450 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain C3348_RS16450 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain C3348_RS16455 PF04198 Putative sugar-binding domain C3348_RS16460 PF04963 Sigma-54 factor, core binding domain C3348_RS16460 PF04552 Sigma-54, DNA binding domain C3348_RS16460 PF00309 Sigma-54 factor, Activator interacting domain (AID) C3348_RS16465 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase C3348_RS16465 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain C3348_RS16470 PF01979 Amidohydrolase family C3348_RS16475 PF01180 Dihydroorotate dehydrogenase C3348_RS16480 PF00860 Permease family C3348_RS16485 PF01979 Amidohydrolase family C3348_RS16490 PF07969 Amidohydrolase family C3348_RS16495 PF07687 Peptidase dimerisation domain C3348_RS16495 PF01546 Peptidase family M20/M25/M40 C3348_RS16500 PF00291 Pyridoxal-phosphate dependent enzyme C3348_RS16510 PF02954 Bacterial regulatory protein, Fis family C3348_RS16510 PF13188 PAS domain C3348_RS16510 PF00158 Sigma-54 interaction domain C3348_RS16515 PF01042 Endoribonuclease L-PSP C3348_RS16530 PF02525 Flavodoxin-like fold C3348_RS16535 PF13411 MerR HTH family regulatory protein C3348_RS16545 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS16545 PF04122 Putative cell wall binding repeat 2 C3348_RS16550 PF00005 ABC transporter C3348_RS16555 PF02687 FtsX-like permease family C3348_RS16565 PF00072 Response regulator receiver domain C3348_RS16565 PF00196 Bacterial regulatory proteins, luxR family C3348_RS16575 PF12833 Helix-turn-helix domain C3348_RS16580 PF00005 ABC transporter C3348_RS16580 PF17760 UvrA interaction domain C3348_RS16580 PF17755 UvrA DNA-binding domain C3348_RS16590 PF13411 MerR HTH family regulatory protein C3348_RS16595 PF07690 Major Facilitator Superfamily C3348_RS16610 PF00005 ABC transporter C3348_RS16615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS16615 PF00672 HAMP domain C3348_RS16615 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS16620 PF00072 Response regulator receiver domain C3348_RS16620 PF00486 Transcriptional regulatory protein, C terminal C3348_RS16625 PF02096 60Kd inner membrane protein C3348_RS16635 PF00881 Nitroreductase family C3348_RS16645 PF01554 MatE C3348_RS16670 PF13649 Methyltransferase domain C3348_RS16685 PF00571 CBS domain C3348_RS16685 PF00005 ABC transporter C3348_RS16690 PF04069 Substrate binding domain of ABC-type glycine betaine transport system C3348_RS16695 PF17755 UvrA DNA-binding domain C3348_RS16695 PF00005 ABC transporter C3348_RS16695 PF17760 UvrA interaction domain C3348_RS16705 PF01430 Hsp33 protein C3348_RS16710 PF13649 Methyltransferase domain C3348_RS16720 PF01546 Peptidase family M20/M25/M40 C3348_RS16720 PF07687 Peptidase dimerisation domain C3348_RS16725 PF03315 Serine dehydratase beta chain C3348_RS16725 PF03313 Serine dehydratase alpha chain C3348_RS16730 PF00701 Dihydrodipicolinate synthetase family C3348_RS16735 PF02774 Semialdehyde dehydrogenase, dimerisation domain C3348_RS16735 PF01118 Semialdehyde dehydrogenase, NAD binding domain C3348_RS16740 PF00701 Dihydrodipicolinate synthetase family C3348_RS16745 PF05173 Dihydrodipicolinate reductase, C-terminus C3348_RS16745 PF01113 Dihydrodipicolinate reductase, N-terminus C3348_RS16750 PF00132 Bacterial transferase hexapeptide (six repeats) C3348_RS16750 PF14602 Hexapeptide repeat of succinyl-transferase C3348_RS16750 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal C3348_RS16760 PF01113 Dihydrodipicolinate reductase, N-terminus C3348_RS16760 PF05173 Dihydrodipicolinate reductase, C-terminus C3348_RS16770 PF00156 Phosphoribosyl transferase domain C3348_RS16775 PF03313 Serine dehydratase alpha chain C3348_RS16785 PF13188 PAS domain C3348_RS16785 PF02954 Bacterial regulatory protein, Fis family C3348_RS16785 PF00158 Sigma-54 interaction domain C3348_RS16790 PF01209 ubiE/COQ5 methyltransferase family C3348_RS16805 PF05544 Proline racemase C3348_RS16815 PF09338 Glycine/sarcosine/betaine reductase component B subunits C3348_RS16820 PF09338 Glycine/sarcosine/betaine reductase component B subunits C3348_RS16835 PF09338 Glycine/sarcosine/betaine reductase component B subunits C3348_RS16845 PF13426 PAS domain C3348_RS16845 PF00158 Sigma-54 interaction domain C3348_RS16845 PF02954 Bacterial regulatory protein, Fis family C3348_RS16855 PF10531 SLBB domain C3348_RS16855 PF13375 RnfC Barrel sandwich hybrid domain C3348_RS16855 PF13237 4Fe-4S dicluster domain C3348_RS16855 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3348_RS16865 PF01522 Polysaccharide deacetylase C3348_RS16870 PF00269 Small, acid-soluble spore proteins, alpha/beta type C3348_RS16890 PF08245 Mur ligase middle domain C3348_RS16900 PF00072 Response regulator receiver domain C3348_RS16900 PF04397 LytTr DNA-binding domain C3348_RS16905 PF00133 tRNA synthetases class I (I, L, M and V) C3348_RS16905 PF08264 Anticodon-binding domain of tRNA C3348_RS16905 PF10458 Valyl tRNA synthetase tRNA binding arm C3348_RS16915 PF01522 Polysaccharide deacetylase C3348_RS16930 PF01895 PhoU domain C3348_RS16935 PF00005 ABC transporter C3348_RS16940 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS16945 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS16955 PF13732 Domain of unknown function (DUF4162) C3348_RS16955 PF00005 ABC transporter C3348_RS16960 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS16960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS16965 PF00072 Response regulator receiver domain C3348_RS16965 PF00486 Transcriptional regulatory protein, C terminal C3348_RS16970 PF00486 Transcriptional regulatory protein, C terminal C3348_RS16970 PF00072 Response regulator receiver domain C3348_RS16975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS16975 PF18698 Histidine kinase sensor domain C3348_RS16975 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS16975 PF00672 HAMP domain C3348_RS16980 PF00486 Transcriptional regulatory protein, C terminal C3348_RS16980 PF00072 Response regulator receiver domain C3348_RS16985 PF12849 PBP superfamily domain C3348_RS16990 PF01432 Peptidase family M3 C3348_RS16990 PF08439 Oligopeptidase F C3348_RS16995 PF02308 MgtC family C3348_RS17015 PF07664 Ferrous iron transport protein B C terminus C3348_RS17015 PF07670 Nucleoside recognition C3348_RS17015 PF02421 Ferrous iron transport protein B C3348_RS17015 PF17910 FeoB cytosolic helical domain C3348_RS17020 PF13580 SIS domain C3348_RS17025 PF03613 PTS system mannose/fructose/sorbose family IID component C3348_RS17030 PF03609 PTS system sorbose-specific iic component C3348_RS17035 PF03610 PTS system fructose IIA component C3348_RS17035 PF03830 PTS system sorbose subfamily IIB component C3348_RS17040 PF03830 PTS system sorbose subfamily IIB component C3348_RS17045 PF00158 Sigma-54 interaction domain C3348_RS17045 PF00874 PRD domain C3348_RS17050 PF03807 NADP oxidoreductase coenzyme F420-dependent C3348_RS17050 PF14748 Pyrroline-5-carboxylate reductase dimerisation C3348_RS17055 PF02901 Pyruvate formate lyase-like C3348_RS17055 PF01228 Glycine radical C3348_RS17060 PF04055 Radical SAM superfamily C3348_RS17065 PF13180 PDZ domain C3348_RS17070 PF00342 Phosphoglucose isomerase C3348_RS17075 PF02690 Na+/Pi-cotransporter C3348_RS17095 PF05225 helix-turn-helix, Psq domain C3348_RS17095 PF02810 SEC-C motif C3348_RS17115 PF07963 Prokaryotic N-terminal methylation motif C3348_RS17115 PF00114 Pilin (bacterial filament) C3348_RS17120 PF00482 Type II secretion system (T2SS), protein F C3348_RS17125 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3348_RS17125 PF00437 Type II/IV secretion system protein C3348_RS17140 PF07690 Major Facilitator Superfamily C3348_RS17145 PF01926 50S ribosome-binding GTPase C3348_RS17150 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS17150 PF05362 Lon protease (S16) C-terminal proteolytic domain C3348_RS17150 PF02190 ATP-dependent protease La (LON) substrate-binding domain C3348_RS17160 PF02417 Chromate transporter C3348_RS17165 PF07724 AAA domain (Cdc48 subfamily) C3348_RS17165 PF06689 ClpX C4-type zinc finger C3348_RS17165 PF10431 C-terminal, D2-small domain, of ClpB protein C3348_RS17170 PF00574 Clp protease C3348_RS17175 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase C3348_RS17175 PF05698 Bacterial trigger factor protein (TF) C-terminus C3348_RS17175 PF05697 Bacterial trigger factor protein (TF) C3348_RS17185 PF01138 3' exoribonuclease family, domain 1 C3348_RS17185 PF03725 3' exoribonuclease family, domain 2 C3348_RS17190 PF03119 NAD-dependent DNA ligase C4 zinc finger domain C3348_RS17190 PF00533 BRCA1 C Terminus (BRCT) domain C3348_RS17190 PF12826 Helix-hairpin-helix motif C3348_RS17190 PF01653 NAD-dependent DNA ligase adenylation domain C3348_RS17190 PF03120 NAD-dependent DNA ligase OB-fold domain C3348_RS17210 PF13247 4Fe-4S dicluster domain C3348_RS17210 PF07992 Pyridine nucleotide-disulphide oxidoreductase C3348_RS17210 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster C3348_RS17215 PF02906 Iron only hydrogenase large subunit, C-terminal domain C3348_RS17215 PF02256 Iron hydrogenase small subunit C3348_RS17215 PF00037 4Fe-4S binding domain C3348_RS17215 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3348_RS17220 PF12800 4Fe-4S binding domain C3348_RS17220 PF13247 4Fe-4S dicluster domain C3348_RS17230 PF02634 FdhD/NarQ family C3348_RS17245 PF00072 Response regulator receiver domain C3348_RS17245 PF00486 Transcriptional regulatory protein, C terminal C3348_RS17265 PF00005 ABC transporter C3348_RS17265 PF13732 Domain of unknown function (DUF4162) C3348_RS17290 PF04397 LytTr DNA-binding domain C3348_RS17290 PF00072 Response regulator receiver domain C3348_RS17320 PF00535 Glycosyl transferase family 2 C3348_RS17320 PF13181 Tetratricopeptide repeat C3348_RS17325 PF00574 Clp protease C3348_RS17330 PF12833 Helix-turn-helix domain C3348_RS17335 PF00392 Bacterial regulatory proteins, gntR family C3348_RS17335 PF00155 Aminotransferase class I and II C3348_RS17345 PF00881 Nitroreductase family C3348_RS17350 PF01638 HxlR-like helix-turn-helix C3348_RS17355 PF01965 DJ-1/PfpI family C3348_RS17360 PF01037 Lrp/AsnC ligand binding domain C3348_RS17365 PF12848 ABC transporter C3348_RS17365 PF00005 ABC transporter C3348_RS17370 PF00486 Transcriptional regulatory protein, C terminal C3348_RS17370 PF00072 Response regulator receiver domain C3348_RS17390 PF00005 ABC transporter C3348_RS17395 PF17156 Gammaproteobacterial periplasmic sensor domain C3348_RS17395 PF00990 Diguanylate cyclase, GGDEF domain C3348_RS17410 PF03193 RsgA GTPase C3348_RS17435 PF02796 Helix-turn-helix domain of resolvase C3348_RS17435 PF00239 Resolvase, N terminal domain C3348_RS17455 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS17455 PF00672 HAMP domain C3348_RS17460 PF00486 Transcriptional regulatory protein, C terminal C3348_RS17460 PF00072 Response regulator receiver domain C3348_RS17470 PF00005 ABC transporter C3348_RS17480 PF04205 FMN-binding domain C3348_RS17480 PF12801 4Fe-4S binding domain C3348_RS17490 PF08534 Redoxin C3348_RS17500 PF03432 Relaxase/Mobilisation nuclease domain C3348_RS17520 PF02463 RecF/RecN/SMC N terminal domain C3348_RS17545 PF01131 DNA topoisomerase C3348_RS17545 PF01751 Toprim domain C3348_RS17610 PF04397 LytTr DNA-binding domain C3348_RS17610 PF00072 Response regulator receiver domain C3348_RS17625 PF04055 Radical SAM superfamily C3348_RS17670 PF01807 CHC2 zinc finger C3348_RS17670 PF08275 DNA primase catalytic core, N-terminal domain C3348_RS17670 PF10410 DnaB-helicase binding domain of primase C3348_RS17670 PF08278 DNA primase DnaG DnaB-binding C3348_RS17725 PF05958 tRNA (Uracil-5-)-methyltransferase C3348_RS17730 PF02887 Pyruvate kinase, alpha/beta domain C3348_RS17730 PF00224 Pyruvate kinase, barrel domain C3348_RS17730 PF00391 PEP-utilising enzyme, mobile domain C3348_RS17735 PF00365 Phosphofructokinase C3348_RS17740 PF07733 Bacterial DNA polymerase III alpha NTPase domain C3348_RS17740 PF17657 Bacterial DNA polymerase III alpha subunit finger domain C3348_RS17740 PF14579 Helix-hairpin-helix motif C3348_RS17740 PF01336 OB-fold nucleic acid binding domain C3348_RS17740 PF02811 PHP domain C3348_RS17745 PF02650 WhiA C-terminal HTH domain C3348_RS17745 PF10298 WhiA N-terminal LAGLIDADG-like domain C3348_RS17745 PF14527 WhiA LAGLIDADG-like domain C3348_RS17750 PF00293 NUDIX domain C3348_RS17755 PF01933 Uncharacterised protein family UPF0052 C3348_RS17760 PF03668 P-loop ATPase protein family C3348_RS17765 PF02811 PHP domain C3348_RS17770 PF01565 FAD binding domain C3348_RS17770 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain C3348_RS17775 PF01226 Formate/nitrite transporter C3348_RS17780 PF13091 PLD-like domain C3348_RS17780 PF13396 Phospholipase_D-nuclease N-terminal C3348_RS17790 PF00037 4Fe-4S binding domain C3348_RS17790 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region C3348_RS17790 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit C3348_RS17795 PF02906 Iron only hydrogenase large subunit, C-terminal domain C3348_RS17795 PF02256 Iron hydrogenase small subunit C3348_RS17795 PF00037 4Fe-4S binding domain C3348_RS17795 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region C3348_RS17800 PF01624 MutS domain I C3348_RS17800 PF05188 MutS domain II C3348_RS17800 PF00488 MutS domain V C3348_RS17800 PF05190 MutS family domain IV C3348_RS17800 PF05192 MutS domain III C3348_RS17805 PF07475 HPr Serine kinase C-terminal domain C3348_RS17805 PF02603 HPr Serine kinase N terminus C3348_RS17810 PF01541 GIY-YIG catalytic domain C3348_RS17810 PF08459 UvrC Helix-hairpin-helix N-terminal C3348_RS17810 PF02151 UvrB/uvrC motif C3348_RS17810 PF12826 Helix-hairpin-helix motif C3348_RS17815 PF17755 UvrA DNA-binding domain C3348_RS17815 PF17760 UvrA interaction domain C3348_RS17820 PF12344 Ultra-violet resistance protein B C3348_RS17820 PF17757 UvrB interaction domain C3348_RS17820 PF02151 UvrB/uvrC motif C3348_RS17820 PF04851 Type III restriction enzyme, res subunit C3348_RS17820 PF00271 Helicase conserved C-terminal domain C3348_RS17830 PF13416 Bacterial extracellular solute-binding protein C3348_RS17835 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS17840 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS17845 PF00005 ABC transporter C3348_RS17845 PF17912 MalK OB fold domain C3348_RS17845 PF03459 TOBE domain C3348_RS17865 PF14824 Sirohaem biosynthesis protein central C3348_RS17865 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS17865 PF10414 Sirohaem synthase dimerisation region C3348_RS17870 PF00490 Delta-aminolevulinic acid dehydratase C3348_RS17875 PF02602 Uroporphyrinogen-III synthase HemD C3348_RS17875 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS17880 PF03900 Porphobilinogen deaminase, C-terminal domain C3348_RS17880 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain C3348_RS17885 PF06180 Cobalt chelatase (CbiK) C3348_RS17890 PF02571 Precorrin-6x reductase CbiJ/CobK C3348_RS17895 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS17900 PF01890 Cobalamin synthesis G C-terminus C3348_RS17900 PF11760 Cobalamin synthesis G N-terminal C3348_RS17900 PF11761 Cobalamin biosynthesis central region C3348_RS17905 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS17910 PF05175 Methyltransferase small domain C3348_RS17915 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS17920 PF01888 CbiD C3348_RS17925 PF02570 Precorrin-8X methylmutase C3348_RS17930 PF00288 GHMP kinases N terminal domain C3348_RS17935 PF00155 Aminotransferase class I and II C3348_RS17940 PF03186 CobD/Cbib protein C3348_RS17945 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain C3348_RS17945 PF07685 CobB/CobQ-like glutamine amidotransferase domain C3348_RS17950 PF07685 CobB/CobQ-like glutamine amidotransferase domain C3348_RS17955 PF00300 Histidine phosphatase superfamily (branch 1) C3348_RS17960 PF02654 Cobalamin-5-phosphate synthase C3348_RS17965 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase C3348_RS17970 PF02277 Phosphoribosyltransferase C3348_RS17990 PF00155 Aminotransferase class I and II C3348_RS17995 PF00557 Metallopeptidase family M24 C3348_RS17995 PF01321 Creatinase/Prolidase N-terminal domain C3348_RS18000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS18000 PF02378 Phosphotransferase system, EIIC C3348_RS18005 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS18010 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3348_RS18015 PF05343 M42 glutamyl aminopeptidase C3348_RS18020 PF03123 CAT RNA binding domain C3348_RS18020 PF00874 PRD domain C3348_RS18025 PF01116 Fructose-bisphosphate aldolase class-II C3348_RS18030 PF01380 SIS domain C3348_RS18035 PF01408 Oxidoreductase family, NAD-binding Rossmann fold C3348_RS18040 PF00294 pfkB family carbohydrate kinase C3348_RS18045 PF00392 Bacterial regulatory proteins, gntR family C3348_RS18045 PF07702 UTRA domain C3348_RS18050 PF01979 Amidohydrolase family C3348_RS18085 PF02796 Helix-turn-helix domain of resolvase C3348_RS18085 PF00239 Resolvase, N terminal domain C3348_RS18105 PF01520 N-acetylmuramoyl-L-alanine amidase C3348_RS18150 PF00872 Transposase, Mutator family C3348_RS18155 PF17820 PDZ domain C3348_RS18155 PF01471 Putative peptidoglycan binding domain C3348_RS18155 PF03572 Peptidase family S41 C3348_RS18160 PF01812 5-formyltetrahydrofolate cyclo-ligase family C3348_RS18175 PF02779 Transketolase, pyrimidine binding domain C3348_RS18175 PF02780 Transketolase, C-terminal domain C3348_RS18180 PF00456 Transketolase, thiamine diphosphate binding domain C3348_RS18185 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system C3348_RS18195 PF00842 Alanine racemase, C-terminal domain C3348_RS18195 PF01168 Alanine racemase, N-terminal domain C3348_RS18205 PF00478 IMP dehydrogenase / GMP reductase domain C3348_RS18205 PF00571 CBS domain C3348_RS18210 PF01648 4'-phosphopantetheinyl transferase superfamily C3348_RS18215 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain C3348_RS18215 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain C3348_RS18220 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3348_RS18220 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3348_RS18225 PF00231 ATP synthase C3348_RS18230 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3348_RS18230 PF00306 ATP synthase alpha/beta chain, C terminal domain C3348_RS18230 PF02874 ATP synthase alpha/beta family, beta-barrel domain C3348_RS18235 PF00213 ATP synthase delta (OSCP) subunit C3348_RS18240 PF00430 ATP synthase B/B' CF(0) C3348_RS18245 PF00137 ATP synthase subunit C C3348_RS18250 PF00119 ATP synthase A chain C3348_RS18275 PF02625 XdhC and CoxI family C3348_RS18275 PF13478 XdhC Rossmann domain C3348_RS18285 PF02502 Ribose/Galactose Isomerase C3348_RS18290 PF01451 Low molecular weight phosphotyrosine protein phosphatase C3348_RS18295 PF01300 Telomere recombination C3348_RS18295 PF03481 Putative GTP-binding controlling metal-binding C3348_RS18305 PF03462 PCRF domain C3348_RS18305 PF00472 RF-1 domain C3348_RS18310 PF05175 Methyltransferase small domain C3348_RS18310 PF17827 PrmC N-terminal domain C3348_RS18315 PF07136 Protein of unknown function (DUF1385) C3348_RS18320 PF01197 Ribosomal protein L31 C3348_RS18325 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain C3348_RS18325 PF07498 Rho termination factor, N-terminal domain C3348_RS18325 PF07497 Rho termination factor, RNA-binding domain C3348_RS18330 PF00483 Nucleotidyl transferase C3348_RS18335 PF01432 Peptidase family M3 C3348_RS18335 PF08439 Oligopeptidase F C3348_RS18340 PF07228 Stage II sporulation protein E (SpoIIE) C3348_RS18345 PF02541 Ppx/GppA phosphatase family C3348_RS18365 PF01479 S4 domain C3348_RS18370 PF00216 Bacterial DNA-binding protein C3348_RS18375 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS18375 PF03819 MazG nucleotide pyrophosphohydrolase domain C3348_RS18380 PF14667 Polysaccharide biosynthesis C-terminal domain C3348_RS18380 PF01943 Polysaccharide biosynthesis protein C3348_RS18385 PF15714 Stage V sporulation protein T C-terminal, transcription factor C3348_RS18385 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin C3348_RS18390 PF05698 Bacterial trigger factor protein (TF) C-terminus C3348_RS18395 PF17757 UvrB interaction domain C3348_RS18395 PF03461 TRCF domain C3348_RS18395 PF00270 DEAD/DEAH box helicase C3348_RS18395 PF00271 Helicase conserved C-terminal domain C3348_RS18395 PF02559 CarD-like/TRCF domain C3348_RS18400 PF01195 Peptidyl-tRNA hydrolase C3348_RS18410 PF06750 Bacterial Peptidase A24 N-terminal domain C3348_RS18410 PF01478 Type IV leader peptidase family C3348_RS18415 PF00437 Type II/IV secretion system protein C3348_RS18445 PF00482 Type II secretion system (T2SS), protein F C3348_RS18450 PF00437 Type II/IV secretion system protein C3348_RS18450 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain C3348_RS18460 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase C3348_RS18460 PF14572 Phosphoribosyl synthetase-associated domain C3348_RS18465 PF00132 Bacterial transferase hexapeptide (six repeats) C3348_RS18465 PF14602 Hexapeptide repeat of succinyl-transferase C3348_RS18465 PF00483 Nucleotidyl transferase C3348_RS18470 PF04026 SpoVG C3348_RS18475 PF00156 Phosphoribosyl transferase domain C3348_RS18475 PF09182 Bacterial purine repressor, N-terminal C3348_RS18480 PF08245 Mur ligase middle domain C3348_RS18480 PF01225 Mur ligase family, catalytic domain C3348_RS18480 PF02875 Mur ligase family, glutamate ligase domain C3348_RS18490 PF16916 Dimerisation domain of Zinc Transporter C3348_RS18490 PF01545 Cation efflux family C3348_RS18495 PF01546 Peptidase family M20/M25/M40 C3348_RS18495 PF07687 Peptidase dimerisation domain C3348_RS18505 PF00398 Ribosomal RNA adenine dimethylase C3348_RS18510 PF13331 Domain of unknown function (DUF4093) C3348_RS18510 PF01751 Toprim domain C3348_RS18530 PF00528 Binding-protein-dependent transport system inner membrane component C3348_RS18535 PF00005 ABC transporter C3348_RS18540 PF02811 PHP domain C3348_RS18545 PF07969 Amidohydrolase family C3348_RS18550 PF00005 ABC transporter C3348_RS18555 PF00005 ABC transporter C3348_RS18560 PF06007 Phosphonate metabolism protein PhnJ C3348_RS18565 PF05861 Bacterial phosphonate metabolism protein (PhnI) C3348_RS18580 PF01026 TatD related DNase C3348_RS18585 PF08264 Anticodon-binding domain of tRNA C3348_RS18585 PF01588 Putative tRNA binding domain C3348_RS18585 PF09334 tRNA synthetases class I (M) C3348_RS18590 PF07670 Nucleoside recognition C3348_RS18600 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family C3348_RS18600 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain C3348_RS18600 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain C3348_RS18605 PF01037 Lrp/AsnC ligand binding domain C3348_RS18610 PF01966 HD domain C3348_RS18610 PF01743 Poly A polymerase head domain C3348_RS18610 PF12627 Probable RNA and SrmB- binding site of polymerase A C3348_RS18615 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases C3348_RS18620 PF05175 Methyltransferase small domain C3348_RS18625 PF04468 PSP1 C-terminal conserved region C3348_RS18630 PF09115 DNA polymerase III, delta subunit, C terminal C3348_RS18635 PF02223 Thymidylate kinase C3348_RS18640 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain C3348_RS18640 PF01276 Orn/Lys/Arg decarboxylase, major domain C3348_RS18645 PF04070 Domain of unknown function (DUF378) C3348_RS18670 PF00152 tRNA synthetases class II (D, K and N) C3348_RS18670 PF01336 OB-fold nucleic acid binding domain C3348_RS18675 PF01272 Transcription elongation factor, GreA/GreB, C-term C3348_RS18675 PF03449 Transcription elongation factor, N-terminal C3348_RS18680 PF01207 Dihydrouridine synthase (Dus) C3348_RS18685 PF03309 Type III pantothenate kinase C3348_RS18695 PF03576 Peptidase family S58 C3348_RS18700 PF03099 Biotin/lipoate A/B protein ligase family C3348_RS18700 PF02237 Biotin protein ligase C terminal domain C3348_RS18700 PF08279 HTH domain C3348_RS18705 PF00004 ATPase family associated with various cellular activities (AAA) C3348_RS18705 PF17862 AAA+ lid domain C3348_RS18705 PF01434 Peptidase family M41 C3348_RS18710 PF01171 PP-loop family C3348_RS18710 PF11734 TilS substrate C-terminal domain C3348_RS18720 PF01177 Asp/Glu/Hydantoin racemase C3348_RS18725 PF01471 Putative peptidoglycan binding domain C3348_RS18725 PF07486 Cell Wall Hydrolase C3348_RS18730 PF09551 Stage II sporulation protein R (spore_II_R) C3348_RS18735 PF07729 FCD domain C3348_RS18735 PF00392 Bacterial regulatory proteins, gntR family C3348_RS18740 PF08544 GHMP kinases C terminal C3348_RS18740 PF00288 GHMP kinases N terminal domain C3348_RS18755 PF05582 YabG peptidase U57 C3348_RS18770 PF07516 SecA Wing and Scaffold domain C3348_RS18770 PF01043 SecA preprotein cross-linking domain C3348_RS18770 PF07517 SecA DEAD-like domain C3348_RS18770 PF02810 SEC-C motif C3348_RS18795 PF07690 Major Facilitator Superfamily C3348_RS18800 PF01053 Cys/Met metabolism PLP-dependent enzyme C3348_RS18805 PF02796 Helix-turn-helix domain of resolvase C3348_RS18805 PF00239 Resolvase, N terminal domain C3348_RS18820 PF10672 S-adenosylmethionine-dependent methyltransferase C3348_RS18825 PF01479 S4 domain C3348_RS18825 PF00849 RNA pseudouridylate synthase C3348_RS18830 PF06445 GyrI-like small molecule binding domain C3348_RS18830 PF13411 MerR HTH family regulatory protein C3348_RS18840 PF12704 MacB-like periplasmic core domain C3348_RS18840 PF00005 ABC transporter C3348_RS18840 PF02687 FtsX-like permease family C3348_RS18845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS18845 PF00672 HAMP domain C3348_RS18845 PF00989 PAS fold C3348_RS18845 PF18698 Histidine kinase sensor domain C3348_RS18845 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS18850 PF00486 Transcriptional regulatory protein, C terminal C3348_RS18850 PF00072 Response regulator receiver domain C3348_RS18855 PF02142 MGS-like domain C3348_RS18855 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3348_RS18855 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3348_RS18860 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3348_RS18860 PF00117 Glutamine amidotransferase class-I C3348_RS18865 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain C3348_RS18865 PF02142 MGS-like domain C3348_RS18865 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain C3348_RS18870 PF00117 Glutamine amidotransferase class-I C3348_RS18870 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain C3348_RS18875 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family C3348_RS18890 PF02073 Thermophilic metalloprotease (M29) C3348_RS18895 PF02310 B12 binding domain C3348_RS18895 PF02607 B12 binding domain C3348_RS18895 PF02965 Vitamin B12 dependent methionine synthase, activation domain C3348_RS18895 PF02574 Homocysteine S-methyltransferase C3348_RS18895 PF00809 Pterin binding enzyme C3348_RS18905 PF02664 S-Ribosylhomocysteinase (LuxS) C3348_RS18910 PF00512 His Kinase A (phospho-acceptor) domain C3348_RS18910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase C3348_RS18915 PF00486 Transcriptional regulatory protein, C terminal C3348_RS18915 PF00072 Response regulator receiver domain C3348_RS18920 PF02557 D-alanyl-D-alanine carboxypeptidase C3348_RS18925 PF01171 PP-loop family C3348_RS18930 PF00149 Calcineurin-like phosphoesterase C3348_RS18930 PF10518 TAT (twin-arginine translocation) pathway signal sequence C3348_RS18935 PF01370 NAD dependent epimerase/dehydratase family C3348_RS18940 PF13419 Haloacid dehalogenase-like hydrolase C3348_RS18950 PF01979 Amidohydrolase family C3348_RS18960 PF00005 ABC transporter C3348_RS18960 PF12857 TOBE-like domain C3348_RS18970 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily C3348_RS18975 PF01554 MatE C3348_RS19035 PF02486 Replication initiation factor C3348_RS19035 PF18106 Rolling Circle replication initiation protein N-terminal domain C3348_RS19050 PF00302 Chloramphenicol acetyltransferase C3348_RS19085 PF00877 NlpC/P60 family C3348_RS19105 PF00005 ABC transporter C3348_RS19120 PF16916 Dimerisation domain of Zinc Transporter C3348_RS19120 PF01545 Cation efflux family C3348_RS19145 PF00589 Phage integrase family C3348_RS19145 PF02920 DNA binding domain of tn916 integrase C3348_RS19150 PF06445 GyrI-like small molecule binding domain C3348_RS19150 PF13411 MerR HTH family regulatory protein C3348_RS19155 PF03471 Transporter associated domain C3348_RS19155 PF00999 Sodium/hydrogen exchanger family C3348_RS19155 PF02080 TrkA-C domain C3348_RS19160 PF07282 Putative transposase DNA-binding domain C3348_RS19160 PF01385 Probable transposase C3348_RS19160 PF12323 Helix-turn-helix domain C3348_RS19180 PF10026 Predicted Zn-dependent protease (DUF2268) C3348_RS19190 PF00117 Glutamine amidotransferase class-I C3348_RS19190 PF00958 GMP synthase C terminal domain C3348_RS19190 PF13302 Acetyltransferase (GNAT) domain C3348_RS19190 PF13673 Acetyltransferase (GNAT) domain C3348_RS19190 PF03352 Methyladenine glycosylase C3348_RS19200 PF00805 Pentapeptide repeats (8 copies) C3348_RS19205 PF08274 PhnA Zinc-Ribbon C3348_RS19205 PF03831 PhnA domain C3348_RS19210 PF00005 ABC transporter C3348_RS19220 PF02581 Thiamine monophosphate synthase C3348_RS19225 PF00701 Dihydrodipicolinate synthetase family C3348_RS19230 PF00571 CBS domain C3348_RS19230 PF01380 SIS domain C3348_RS19240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS19275 PF03466 LysR substrate binding domain C3348_RS19275 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family C3348_RS19280 PF00294 pfkB family carbohydrate kinase C3348_RS19285 PF07071 KDGP aldolase C3348_RS19290 PF03841 L-seryl-tRNA selenium transferase C3348_RS19295 PF01979 Amidohydrolase family C3348_RS19305 PF02378 Phosphotransferase system, EIIC C3348_RS19310 PF00392 Bacterial regulatory proteins, gntR family C3348_RS19310 PF07702 UTRA domain C3348_RS19315 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit C3348_RS19320 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit C3348_RS19325 PF02590 Predicted SPOUT methyltransferase C3348_RS19330 PF02378 Phosphotransferase system, EIIC C3348_RS19335 PF00753 Metallo-beta-lactamase superfamily C3348_RS19350 PF01695 IstB-like ATP binding protein C3348_RS19375 PF00709 Adenylosuccinate synthetase C3348_RS19385 PF03796 DnaB-like helicase C terminal domain C3348_RS19385 PF00772 DnaB-like helicase N terminal domain C3348_RS19390 PF01281 Ribosomal protein L9, N-terminal domain C3348_RS19390 PF03948 Ribosomal protein L9, C-terminal domain C3348_RS19395 PF02272 DHHA1 domain C3348_RS19395 PF01368 DHH family C3348_RS19410 PF01084 Ribosomal protein S18 C3348_RS19415 PF00436 Single-strand binding protein family C3348_RS19420 PF01250 Ribosomal protein S6 C3348_RS19425 PF00155 Aminotransferase class I and II C3348_RS19440 PF01206 Sulfurtransferase TusA C3348_RS19455 PF00266 Aminotransferase class-V C3348_RS19460 PF17762 HTH domain found in ParB protein C3348_RS19460 PF02195 ParB-like nuclease domain C3348_RS19465 PF13614 AAA domain C3348_RS19470 PF17762 HTH domain found in ParB protein C3348_RS19470 PF02195 ParB-like nuclease domain C3348_RS19475 PF02527 rRNA small subunit methyltransferase G C3348_RS19480 PF13932 GidA associated domain C3348_RS19480 PF01134 Glucose inhibited division protein A C3348_RS19485 PF01926 50S ribosome-binding GTPase C3348_RS19485 PF12631 MnmE helical domain C3348_RS19485 PF10396 GTP-binding protein TrmE N-terminus C3348_RS19490 PF01424 R3H domain C3348_RS19490 PF14804 Jag N-terminus C3348_RS19495 PF02096 60Kd inner membrane protein C3348_RS19500 PF01809 Putative membrane protein insertion efficiency factor C3348_RS19505 PF00825 Ribonuclease P C3348_RS19510 PF00468 Ribosomal protein L34