locus-tag class description JMW47_RS00035 PF00484 Carbonic anhydrase JMW47_RS00050 PF00005 ABC transporter JMW47_RS00050 PF00664 ABC transporter transmembrane region JMW47_RS00075 PF01594 AI-2E family transporter JMW47_RS00080 PF00756 Putative esterase JMW47_RS00085 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS00100 PF00155 Aminotransferase class I and II JMW47_RS00130 PF00210 Ferritin-like domain JMW47_RS00135 PF00480 ROK family JMW47_RS00150 PF02811 PHP domain JMW47_RS00155 PF02903 Alpha amylase, N-terminal ig-like domain JMW47_RS00155 PF16657 Maltogenic Amylase, C-terminal domain JMW47_RS00155 PF00128 Alpha amylase, catalytic domain JMW47_RS00165 PF12323 Helix-turn-helix domain JMW47_RS00165 PF07282 Putative transposase DNA-binding domain JMW47_RS00165 PF01385 Probable transposase JMW47_RS00170 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS00175 PF03636 Glycosyl hydrolase family 65, N-terminal domain JMW47_RS00175 PF03632 Glycosyl hydrolase family 65 central catalytic domain JMW47_RS00175 PF03633 Glycosyl hydrolase family 65, C-terminal domain JMW47_RS00180 PF13457 GW (Gly-Tryp) dipeptide domain JMW47_RS00180 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMW47_RS00200 PF00271 Helicase conserved C-terminal domain JMW47_RS00200 PF00270 DEAD/DEAH box helicase JMW47_RS00200 PF03880 DbpA RNA binding domain JMW47_RS00205 PF00561 alpha/beta hydrolase fold JMW47_RS00210 PF00176 SNF2 family N-terminal domain JMW47_RS00210 PF04434 SWIM zinc finger JMW47_RS00210 PF00271 Helicase conserved C-terminal domain JMW47_RS00215 PF10518 TAT (twin-arginine translocation) pathway signal sequence JMW47_RS00215 PF01568 Molydopterin dinucleotide binding domain JMW47_RS00215 PF00384 Molybdopterin oxidoreductase JMW47_RS00215 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JMW47_RS00220 PF13247 4Fe-4S dicluster domain JMW47_RS00220 PF12800 4Fe-4S binding domain JMW47_RS00225 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMW47_RS00230 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS00235 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS00240 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMW47_RS00245 PF07687 Peptidase dimerisation domain JMW47_RS00245 PF01546 Peptidase family M20/M25/M40 JMW47_RS00250 PF00005 ABC transporter JMW47_RS00255 PF00375 Sodium:dicarboxylate symporter family JMW47_RS00275 PF03063 Prismane/CO dehydrogenase family JMW47_RS00280 PF01734 Patatin-like phospholipase JMW47_RS00285 PF01641 SelR domain JMW47_RS00285 PF01625 Peptide methionine sulfoxide reductase JMW47_RS00295 PF00056 lactate/malate dehydrogenase, NAD binding domain JMW47_RS00295 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain JMW47_RS00300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMW47_RS00300 PF01411 tRNA synthetases class II (A) JMW47_RS00300 PF02272 DHHA1 domain JMW47_RS00315 PF04892 VanZ like family JMW47_RS00325 PF00202 Aminotransferase class-III JMW47_RS00340 PF04055 Radical SAM superfamily JMW47_RS00340 PF06968 Biotin and Thiamin Synthesis associated domain JMW47_RS00345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JMW47_RS00345 PF01926 50S ribosome-binding GTPase JMW47_RS00355 PF05343 M42 glutamyl aminopeptidase JMW47_RS00375 PF04294 VanW like protein JMW47_RS00385 PF01139 tRNA-splicing ligase RtcB JMW47_RS00390 PF00488 MutS domain V JMW47_RS00390 PF01713 Smr domain JMW47_RS00410 PF00768 D-alanyl-D-alanine carboxypeptidase JMW47_RS00410 PF07943 Penicillin-binding protein 5, C-terminal domain JMW47_RS00415 PF00318 Ribosomal protein S2 JMW47_RS00420 PF00889 Elongation factor TS JMW47_RS00425 PF00696 Amino acid kinase family JMW47_RS00430 PF01765 Ribosome recycling factor JMW47_RS00440 PF01255 Putative undecaprenyl diphosphate synthase JMW47_RS00465 PF00563 EAL domain JMW47_RS00465 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS00465 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS00505 PF01867 CRISPR associated protein Cas1 JMW47_RS00510 PF09827 CRISPR associated protein Cas2 JMW47_RS00520 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain JMW47_RS00520 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase JMW47_RS00520 PF13288 DXP reductoisomerase C-terminal domain JMW47_RS00525 PF02163 Peptidase family M50 JMW47_RS00525 PF17820 PDZ domain JMW47_RS00530 PF04551 GcpE protein JMW47_RS00550 PF00583 Acetyltransferase (GNAT) family JMW47_RS00585 PF00288 GHMP kinases N terminal domain JMW47_RS00585 PF08544 GHMP kinases C terminal JMW47_RS00590 PF14821 Threonine synthase N terminus JMW47_RS00590 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS00595 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS00600 PF00009 Elongation factor Tu GTP binding domain JMW47_RS00600 PF03144 Elongation factor Tu domain 2 JMW47_RS00600 PF14492 Elongation Factor G, domain II JMW47_RS00600 PF00679 Elongation factor G C-terminus JMW47_RS00615 PF00403 Heavy-metal-associated domain JMW47_RS00620 PF00072 Response regulator receiver domain JMW47_RS00620 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS00625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS00625 PF00672 HAMP domain JMW47_RS00625 PF13426 PAS domain JMW47_RS00625 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS00635 PF08220 DeoR-like helix-turn-helix domain JMW47_RS00635 PF00455 DeoR C terminal sensor domain JMW47_RS00640 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMW47_RS00650 PF01554 MatE JMW47_RS00655 PF00860 Permease family JMW47_RS00660 PF00271 Helicase conserved C-terminal domain JMW47_RS00660 PF00270 DEAD/DEAH box helicase JMW47_RS00665 PF00005 ABC transporter JMW47_RS00685 PF00999 Sodium/hydrogen exchanger family JMW47_RS00695 PF00111 2Fe-2S iron-sulfur cluster binding domain JMW47_RS00695 PF01799 [2Fe-2S] binding domain JMW47_RS00700 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JMW47_RS00700 PF01799 [2Fe-2S] binding domain JMW47_RS00700 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JMW47_RS00710 PF06177 QueT transporter JMW47_RS00725 PF12102 Domain of unknown function (DUF3578) JMW47_RS00725 PF07728 AAA domain (dynein-related subfamily) JMW47_RS00735 PF02954 Bacterial regulatory protein, Fis family JMW47_RS00735 PF13188 PAS domain JMW47_RS00735 PF00158 Sigma-54 interaction domain JMW47_RS00740 PF00860 Permease family JMW47_RS00745 PF00860 Permease family JMW47_RS00750 PF01979 Amidohydrolase family JMW47_RS00755 PF01799 [2Fe-2S] binding domain JMW47_RS00755 PF00111 2Fe-2S iron-sulfur cluster binding domain JMW47_RS00760 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JMW47_RS00760 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JMW47_RS00770 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS00775 PF07687 Peptidase dimerisation domain JMW47_RS00775 PF01546 Peptidase family M20/M25/M40 JMW47_RS00780 PF01979 Amidohydrolase family JMW47_RS00785 PF01979 Amidohydrolase family JMW47_RS00790 PF00111 2Fe-2S iron-sulfur cluster binding domain JMW47_RS00790 PF01799 [2Fe-2S] binding domain JMW47_RS00800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JMW47_RS00800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JMW47_RS00805 PF01979 Amidohydrolase family JMW47_RS00810 PF01180 Dihydroorotate dehydrogenase JMW47_RS00820 PF00860 Permease family JMW47_RS00830 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JMW47_RS00830 PF01799 [2Fe-2S] binding domain JMW47_RS00830 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JMW47_RS00855 PF00005 ABC transporter JMW47_RS00855 PF12848 ABC transporter JMW47_RS00865 PF14659 Phage integrase, N-terminal SAM-like domain JMW47_RS00865 PF00589 Phage integrase family JMW47_RS00895 PF00781 Diacylglycerol kinase catalytic domain JMW47_RS00900 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain JMW47_RS00900 PF00749 tRNA synthetases class I (E and Q), catalytic domain JMW47_RS00925 PF00696 Amino acid kinase family JMW47_RS00925 PF01842 ACT domain JMW47_RS00925 PF13840 ACT domain JMW47_RS00930 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain JMW47_RS00930 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain JMW47_RS00940 PF01594 AI-2E family transporter JMW47_RS00945 PF00849 RNA pseudouridylate synthase JMW47_RS00945 PF01479 S4 domain JMW47_RS00950 PF06962 Putative rRNA methylase JMW47_RS00955 PF01380 SIS domain JMW47_RS00955 PF01418 Helix-turn-helix domain, rpiR family JMW47_RS00975 PF13443 Cro/C1-type HTH DNA-binding domain JMW47_RS01000 PF13305 Tetracyclin repressor-like, C-terminal domain JMW47_RS01000 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS01010 PF00583 Acetyltransferase (GNAT) family JMW47_RS01010 PF14268 YoaP-like JMW47_RS01015 PF02774 Semialdehyde dehydrogenase, dimerisation domain JMW47_RS01015 PF01118 Semialdehyde dehydrogenase, NAD binding domain JMW47_RS01020 PF01960 ArgJ family JMW47_RS01025 PF00696 Amino acid kinase family JMW47_RS01030 PF00202 Aminotransferase class-III JMW47_RS01035 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JMW47_RS01035 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JMW47_RS01045 PF01177 Asp/Glu/Hydantoin racemase JMW47_RS01050 PF07687 Peptidase dimerisation domain JMW47_RS01050 PF01546 Peptidase family M20/M25/M40 JMW47_RS01065 PF00005 ABC transporter JMW47_RS01070 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS01085 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS01085 PF07724 AAA domain (Cdc48 subfamily) JMW47_RS01085 PF02861 Clp amino terminal domain, pathogenicity island component JMW47_RS01085 PF17871 AAA lid domain JMW47_RS01085 PF10431 C-terminal, D2-small domain, of ClpB protein JMW47_RS01090 PF07690 Major Facilitator Superfamily JMW47_RS01095 PF12833 Helix-turn-helix domain JMW47_RS01115 PF04892 VanZ like family JMW47_RS01125 PF00920 Dehydratase family JMW47_RS01130 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS01130 PF18665 Tetracyclin repressor-like, C-terminal domain JMW47_RS01135 PF00561 alpha/beta hydrolase fold JMW47_RS01140 PF00082 Subtilase family JMW47_RS01145 PF00258 Flavodoxin JMW47_RS01150 PF03328 HpcH/HpaI aldolase/citrate lyase family JMW47_RS01155 PF13411 MerR HTH family regulatory protein JMW47_RS01160 PF02742 Iron dependent repressor, metal binding and dimerisation domain JMW47_RS01160 PF01325 Iron dependent repressor, N-terminal DNA binding domain JMW47_RS01165 PF12833 Helix-turn-helix domain JMW47_RS01170 PF01925 Sulfite exporter TauE/SafE JMW47_RS01290 PF17099 Tryptophan transporter TrpP JMW47_RS01295 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS01295 PF04122 Putative cell wall binding repeat 2 JMW47_RS01300 PF00919 Uncharacterized protein family UPF0004 JMW47_RS01300 PF01938 TRAM domain JMW47_RS01300 PF04055 Radical SAM superfamily JMW47_RS01310 PF00293 NUDIX domain JMW47_RS01315 PF02567 Phenazine biosynthesis-like protein JMW47_RS01320 PF01638 HxlR-like helix-turn-helix JMW47_RS01345 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS01350 PF09084 NMT1/THI5 like JMW47_RS01355 PF00005 ABC transporter JMW47_RS01360 PF01624 MutS domain I JMW47_RS01360 PF05188 MutS domain II JMW47_RS01360 PF05192 MutS domain III JMW47_RS01360 PF05190 MutS family domain IV JMW47_RS01360 PF00488 MutS domain V JMW47_RS01365 PF01119 DNA mismatch repair protein, C-terminal domain JMW47_RS01365 PF08676 MutL C terminal dimerisation domain JMW47_RS01375 PF17209 Hfq protein JMW47_RS01380 PF06838 Methionine gamma-lyase JMW47_RS01385 PF01546 Peptidase family M20/M25/M40 JMW47_RS01400 PF04073 Aminoacyl-tRNA editing domain JMW47_RS01405 PF04474 Protein of unknown function (DUF554) JMW47_RS01445 PF12704 MacB-like periplasmic core domain JMW47_RS01445 PF02687 FtsX-like permease family JMW47_RS01445 PF00005 ABC transporter JMW47_RS01450 PF16736 Single Cache-like JMW47_RS01450 PF00989 PAS fold JMW47_RS01450 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS01450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS01455 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS01455 PF00072 Response regulator receiver domain JMW47_RS01460 PF13486 Reductive dehalogenase subunit JMW47_RS01460 PF12838 4Fe-4S dicluster domain JMW47_RS01465 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS01465 PF00072 Response regulator receiver domain JMW47_RS01470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS01470 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS01475 PF00005 ABC transporter JMW47_RS01475 PF12704 MacB-like periplasmic core domain JMW47_RS01475 PF02687 FtsX-like permease family JMW47_RS01490 PF03466 LysR substrate binding domain JMW47_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS01495 PF13302 Acetyltransferase (GNAT) domain JMW47_RS01500 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMW47_RS01500 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMW47_RS01505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS01505 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS01515 PF00005 ABC transporter JMW47_RS01525 PF02390 Putative methyltransferase JMW47_RS01545 PF00364 Biotin-requiring enzyme JMW47_RS01550 PF02785 Biotin carboxylase C-terminal domain JMW47_RS01550 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMW47_RS01550 PF00289 Biotin carboxylase, N-terminal domain JMW47_RS01555 PF01039 Carboxyl transferase domain JMW47_RS01555 PF17848 Acetyl-coA carboxylase zinc finger domain JMW47_RS01560 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit JMW47_RS01565 PF04232 Stage V sporulation protein S (SpoVS) JMW47_RS01580 PF00589 Phage integrase family JMW47_RS01580 PF02899 Phage integrase, N-terminal SAM-like domain JMW47_RS01585 PF00717 Peptidase S24-like JMW47_RS01585 PF01726 LexA DNA binding domain JMW47_RS01605 PF00005 ABC transporter JMW47_RS01625 PF06249 Ethanolamine utilisation protein EutQ JMW47_RS01630 PF04346 Ethanolamine utilisation protein, EutH JMW47_RS01640 PF03319 Ethanolamine utilisation protein EutN/carboxysome JMW47_RS01650 PF06130 Phosphate propanoyltransferase JMW47_RS01660 PF00936 BMC domain JMW47_RS01665 PF00171 Aldehyde dehydrogenase family JMW47_RS01665 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS01670 PF00936 BMC domain JMW47_RS01675 PF00936 BMC domain JMW47_RS01680 PF05985 Ethanolamine ammonia-lyase light chain (EutC) JMW47_RS01685 PF06751 Ethanolamine ammonia lyase large subunit (EutB) JMW47_RS01690 PF06277 Ethanolamine utilisation protein EutA JMW47_RS01695 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS01695 PF12282 Signal transduction histidine kinase JMW47_RS01695 PF07568 Histidine kinase JMW47_RS01700 PF00072 Response regulator receiver domain JMW47_RS01700 PF03861 ANTAR domain JMW47_RS01705 PF10662 Ethanolamine utilisation - propanediol utilisation JMW47_RS01710 PF00936 BMC domain JMW47_RS01715 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS01725 PF00239 Resolvase, N terminal domain JMW47_RS01725 PF02796 Helix-turn-helix domain of resolvase JMW47_RS01730 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS01800 PF01726 LexA DNA binding domain JMW47_RS01800 PF00717 Peptidase S24-like JMW47_RS01805 PF11799 impB/mucB/samB family C-terminal domain JMW47_RS01805 PF00817 impB/mucB/samB family JMW47_RS01815 PF01381 Helix-turn-helix JMW47_RS01820 PF00872 Transposase, Mutator family JMW47_RS01835 PF04237 YjbR JMW47_RS01845 PF03432 Relaxase/Mobilisation nuclease domain JMW47_RS01855 PF04055 Radical SAM superfamily JMW47_RS01875 PF03432 Relaxase/Mobilisation nuclease domain JMW47_RS01895 PF01751 Toprim domain JMW47_RS01895 PF01131 DNA topoisomerase JMW47_RS01915 PF01443 Viral (Superfamily 1) RNA helicase JMW47_RS01915 PF03389 MobA/MobL family JMW47_RS01915 PF17841 BID domain of Bartonella effector protein (Bep) JMW47_RS01965 PF07690 Major Facilitator Superfamily JMW47_RS01970 PF01348 Type II intron maturase JMW47_RS01970 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) JMW47_RS01995 PF01807 CHC2 zinc finger JMW47_RS01995 PF08275 DNA primase catalytic core, N-terminal domain JMW47_RS02005 PF01381 Helix-turn-helix JMW47_RS02020 PF01076 Plasmid recombination enzyme JMW47_RS02040 PF00561 alpha/beta hydrolase fold JMW47_RS02045 PF04439 Streptomycin adenylyltransferase JMW47_RS02075 PF04203 Sortase domain JMW47_RS02080 PF12848 ABC transporter JMW47_RS02080 PF00005 ABC transporter JMW47_RS02090 PF04002 RadC-like JAB domain JMW47_RS02115 PF01751 Toprim domain JMW47_RS02115 PF01131 DNA topoisomerase JMW47_RS02120 PF05063 MT-A70 JMW47_RS02135 PF00877 NlpC/P60 family JMW47_RS02135 PF01476 LysM domain JMW47_RS02170 PF01695 IstB-like ATP binding protein JMW47_RS02205 PF02195 ParB-like nuclease domain JMW47_RS02205 PF17762 HTH domain found in ParB protein JMW47_RS02210 PF13614 AAA domain JMW47_RS02220 PF13302 Acetyltransferase (GNAT) domain JMW47_RS02260 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMW47_RS02265 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS02290 PF04073 Aminoacyl-tRNA editing domain JMW47_RS02295 PF08241 Methyltransferase domain JMW47_RS02320 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS02320 PF08448 PAS fold JMW47_RS02320 PF00563 EAL domain JMW47_RS02325 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS02325 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS02325 PF00563 EAL domain JMW47_RS02330 PF02153 Prephenate dehydrogenase JMW47_RS02335 PF01202 Shikimate kinase JMW47_RS02340 PF08501 Shikimate dehydrogenase substrate binding domain JMW47_RS02345 PF01817 Chorismate mutase type II JMW47_RS02345 PF00800 Prephenate dehydratase JMW47_RS02350 PF01264 Chorismate synthase JMW47_RS02355 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMW47_RS02360 PF01761 3-dehydroquinate synthase JMW47_RS02365 PF18152 DAHP synthase ferredoxin-like domain JMW47_RS02365 PF00793 DAHP synthetase I family JMW47_RS02370 PF01544 CorA-like Mg2+ transporter protein JMW47_RS02375 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS02375 PF00072 Response regulator receiver domain JMW47_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS02380 PF13493 Domain of unknown function (DUF4118) JMW47_RS02380 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS02380 PF02702 Osmosensitive K+ channel His kinase sensor domain JMW47_RS02385 PF06480 FtsH Extracellular JMW47_RS02385 PF01434 Peptidase family M41 JMW47_RS02385 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS02385 PF17862 AAA+ lid domain JMW47_RS02390 PF01047 MarR family JMW47_RS02395 PF04204 Homoserine O-succinyltransferase JMW47_RS02400 PF01053 Cys/Met metabolism PLP-dependent enzyme JMW47_RS02405 PF00689 Cation transporting ATPase, C-terminus JMW47_RS02405 PF00690 Cation transporter/ATPase, N-terminus JMW47_RS02410 PF03883 Peroxide stress protein YaaA JMW47_RS02415 PF00578 AhpC/TSA family JMW47_RS02420 PF13382 Adenine deaminase C-terminal domain JMW47_RS02420 PF01979 Amidohydrolase family JMW47_RS02430 PF02401 LytB protein JMW47_RS02435 PF01553 Acyltransferase JMW47_RS02440 PF02224 Cytidylate kinase JMW47_RS02450 PF00300 Histidine phosphatase superfamily (branch 1) JMW47_RS02480 PF07690 Major Facilitator Superfamily JMW47_RS02490 PF00294 pfkB family carbohydrate kinase JMW47_RS02495 PF00251 Glycosyl hydrolases family 32 N-terminal domain JMW47_RS02495 PF08244 Glycosyl hydrolases family 32 C terminal JMW47_RS02500 PF02378 Phosphotransferase system, EIIC JMW47_RS02500 PF00367 phosphotransferase system, EIIB JMW47_RS02505 PF13407 Periplasmic binding protein domain JMW47_RS02505 PF00356 Bacterial regulatory proteins, lacI family JMW47_RS02515 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMW47_RS02515 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMW47_RS02520 PF02342 TerD domain JMW47_RS02525 PF02342 TerD domain JMW47_RS02530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS02530 PF03466 LysR substrate binding domain JMW47_RS02535 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS02535 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMW47_RS02540 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JMW47_RS02540 PF13187 4Fe-4S dicluster domain JMW47_RS02540 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JMW47_RS02560 PF01370 NAD dependent epimerase/dehydratase family JMW47_RS02575 PF04239 Protein of unknown function (DUF421) JMW47_RS02585 PF13411 MerR HTH family regulatory protein JMW47_RS02585 PF07739 TipAS antibiotic-recognition domain JMW47_RS02595 PF00764 Arginosuccinate synthase JMW47_RS02600 PF01416 tRNA pseudouridine synthase JMW47_RS02605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS02605 PF00672 HAMP domain JMW47_RS02605 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS02610 PF00072 Response regulator receiver domain JMW47_RS02610 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS02620 PF02926 THUMP domain JMW47_RS02620 PF01170 Putative RNA methylase family UPF0020 JMW47_RS02625 PF02540 NAD synthase JMW47_RS02635 PF03960 ArsC family JMW47_RS02640 PF00005 ABC transporter JMW47_RS02645 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS02650 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMW47_RS02675 PF01869 BadF/BadG/BcrA/BcrD ATPase family JMW47_RS02685 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JMW47_RS02685 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMW47_RS02695 PF00293 NUDIX domain JMW47_RS02705 PF06961 Protein of unknown function (DUF1294) JMW47_RS02710 PF11208 Protein of unknown function (DUF2992) JMW47_RS02740 PF01327 Polypeptide deformylase JMW47_RS02760 PF00005 ABC transporter JMW47_RS02765 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS02780 PF01869 BadF/BadG/BcrA/BcrD ATPase family JMW47_RS02785 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JMW47_RS02795 PF01385 Probable transposase JMW47_RS02795 PF07282 Putative transposase DNA-binding domain JMW47_RS02795 PF12323 Helix-turn-helix domain JMW47_RS02810 PF00962 Adenosine/AMP deaminase JMW47_RS02815 PF03616 Sodium/glutamate symporter JMW47_RS02835 PF00072 Response regulator receiver domain JMW47_RS02835 PF04397 LytTr DNA-binding domain JMW47_RS02845 PF09338 Glycine/sarcosine/betaine reductase component B subunits JMW47_RS02850 PF00158 Sigma-54 interaction domain JMW47_RS02850 PF02954 Bacterial regulatory protein, Fis family JMW47_RS02850 PF00072 Response regulator receiver domain JMW47_RS02855 PF13426 PAS domain JMW47_RS02855 PF13188 PAS domain JMW47_RS02855 PF00989 PAS fold JMW47_RS02855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS02855 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS02860 PF02447 GntP family permease JMW47_RS02865 PF07883 Cupin domain JMW47_RS02865 PF01381 Helix-turn-helix JMW47_RS02870 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS02880 PF01208 Uroporphyrinogen decarboxylase (URO-D) JMW47_RS02885 PF02310 B12 binding domain JMW47_RS02885 PF02607 B12 binding domain JMW47_RS02895 PF10609 NUBPL iron-transfer P-loop NTPase JMW47_RS02910 PF07282 Putative transposase DNA-binding domain JMW47_RS02910 PF01385 Probable transposase JMW47_RS02910 PF12323 Helix-turn-helix domain JMW47_RS02920 PF00148 Nitrogenase component 1 type Oxidoreductase JMW47_RS02925 PF00005 ABC transporter JMW47_RS02930 PF01032 FecCD transport family JMW47_RS02935 PF01497 Periplasmic binding protein JMW47_RS02940 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family JMW47_RS02945 PF12833 Helix-turn-helix domain JMW47_RS02945 PF17853 GGDEF-like domain JMW47_RS02950 PF02690 Na+/Pi-cotransporter JMW47_RS02985 PF01553 Acyltransferase JMW47_RS03025 PF01967 MoaC family JMW47_RS03030 PF06463 Molybdenum Cofactor Synthesis C JMW47_RS03030 PF04055 Radical SAM superfamily JMW47_RS03035 PF00994 Probable molybdopterin binding domain JMW47_RS03040 PF01906 Putative heavy-metal-binding JMW47_RS03050 PF12804 MobA-like NTP transferase domain JMW47_RS03060 PF03606 C4-dicarboxylate anaerobic carrier JMW47_RS03075 PF05690 Thiazole biosynthesis protein ThiG JMW47_RS03080 PF00899 ThiF family JMW47_RS03080 PF00581 Rhodanese-like domain JMW47_RS03090 PF01964 Radical SAM ThiC family JMW47_RS03095 PF00270 DEAD/DEAH box helicase JMW47_RS03095 PF09382 RQC domain JMW47_RS03095 PF16124 RecQ zinc-binding JMW47_RS03095 PF00570 HRDC domain JMW47_RS03095 PF00271 Helicase conserved C-terminal domain JMW47_RS03100 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMW47_RS03100 PF01872 RibD C-terminal domain JMW47_RS03105 PF00677 Lumazine binding domain JMW47_RS03110 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase JMW47_RS03110 PF00925 GTP cyclohydrolase II JMW47_RS03115 PF00885 6,7-dimethyl-8-ribityllumazine synthase JMW47_RS03125 PF01235 Sodium:alanine symporter family JMW47_RS03130 PF03600 Citrate transporter JMW47_RS03145 PF01022 Bacterial regulatory protein, arsR family JMW47_RS03150 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS03155 PF00085 Thioredoxin JMW47_RS03160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS03160 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS03165 PF00072 Response regulator receiver domain JMW47_RS03165 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS03195 PF01156 Inosine-uridine preferring nucleoside hydrolase JMW47_RS03200 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS03200 PF08359 YsiA-like protein, C-terminal region JMW47_RS03225 PF01470 Pyroglutamyl peptidase JMW47_RS03230 PF01638 HxlR-like helix-turn-helix JMW47_RS03245 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS03245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS03250 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS03250 PF00072 Response regulator receiver domain JMW47_RS03260 PF00005 ABC transporter JMW47_RS03275 PF03009 Glycerophosphoryl diester phosphodiesterase family JMW47_RS03280 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS03285 PF01381 Helix-turn-helix JMW47_RS03285 PF07883 Cupin domain JMW47_RS03305 PF07282 Putative transposase DNA-binding domain JMW47_RS03305 PF12323 Helix-turn-helix domain JMW47_RS03305 PF01385 Probable transposase JMW47_RS03315 PF06865 Pyrimidine/purine nucleoside phosphorylase JMW47_RS03325 PF02347 Glycine cleavage system P-protein JMW47_RS03330 PF02347 Glycine cleavage system P-protein JMW47_RS03340 PF03553 Na+/H+ antiporter family JMW47_RS03345 PF10437 Bacterial lipoate protein ligase C-terminus JMW47_RS03345 PF03099 Biotin/lipoate A/B protein ligase family JMW47_RS03350 PF03180 NLPA lipoprotein JMW47_RS03355 PF02342 TerD domain JMW47_RS03360 PF01590 GAF domain JMW47_RS03360 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS03360 PF00563 EAL domain JMW47_RS03360 PF00360 Phytochrome region JMW47_RS03365 PF01497 Periplasmic binding protein JMW47_RS03370 PF00005 ABC transporter JMW47_RS03375 PF01032 FecCD transport family JMW47_RS03380 PF01032 FecCD transport family JMW47_RS03385 PF01244 Membrane dipeptidase (Peptidase family M19) JMW47_RS03390 PF05684 Protein of unknown function (DUF819) JMW47_RS03420 PF05816 Toxic anion resistance protein (TelA) JMW47_RS03425 PF14266 Putative component of 'biosynthetic module' JMW47_RS03430 PF00689 Cation transporting ATPase, C-terminus JMW47_RS03430 PF00690 Cation transporter/ATPase, N-terminus JMW47_RS03435 PF02342 TerD domain JMW47_RS03440 PF02342 TerD domain JMW47_RS03445 PF02342 TerD domain JMW47_RS03450 PF13180 PDZ domain JMW47_RS03455 PF00733 Asparagine synthase JMW47_RS03455 PF13537 Glutamine amidotransferase domain JMW47_RS03460 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain JMW47_RS03460 PF02777 Iron/manganese superoxide dismutases, C-terminal domain JMW47_RS03475 PF00258 Flavodoxin JMW47_RS03475 PF00753 Metallo-beta-lactamase superfamily JMW47_RS03485 PF00924 Mechanosensitive ion channel JMW47_RS03485 PF05552 Conserved TM helix JMW47_RS03500 PF00005 ABC transporter JMW47_RS03505 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS03510 PF00563 EAL domain JMW47_RS03510 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS03510 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS03515 PF12679 ABC-2 family transporter protein JMW47_RS03520 PF00005 ABC transporter JMW47_RS03530 PF01979 Amidohydrolase family JMW47_RS03555 PF00005 ABC transporter JMW47_RS03560 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS03570 PF13732 Domain of unknown function (DUF4162) JMW47_RS03570 PF00005 ABC transporter JMW47_RS03580 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS03585 PF02581 Thiamine monophosphate synthase JMW47_RS03590 PF02110 Hydroxyethylthiazole kinase family JMW47_RS03595 PF08543 Phosphomethylpyrimidine kinase JMW47_RS03600 PF01541 GIY-YIG catalytic domain JMW47_RS03605 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain JMW47_RS03610 PF00557 Metallopeptidase family M24 JMW47_RS03620 PF00132 Bacterial transferase hexapeptide (six repeats) JMW47_RS03625 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS03630 PF02669 K+-transporting ATPase, c chain JMW47_RS03640 PF03814 Potassium-transporting ATPase A subunit JMW47_RS03650 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMW47_RS03650 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMW47_RS03670 PF00561 alpha/beta hydrolase fold JMW47_RS03675 PF00815 Histidinol dehydrogenase JMW47_RS03685 PF01842 ACT domain JMW47_RS03685 PF03447 Homoserine dehydrogenase, NAD binding domain JMW47_RS03685 PF00742 Homoserine dehydrogenase JMW47_RS03690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS03690 PF18698 Histidine kinase sensor domain JMW47_RS03690 PF00989 PAS fold JMW47_RS03690 PF00672 HAMP domain JMW47_RS03690 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS03695 PF03631 Virulence factor BrkB JMW47_RS03700 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMW47_RS03700 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMW47_RS03700 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMW47_RS03700 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMW47_RS03710 PF01476 LysM domain JMW47_RS03710 PF06725 3D domain JMW47_RS03720 PF01381 Helix-turn-helix JMW47_RS03730 PF00005 ABC transporter JMW47_RS03735 PF12146 Serine aminopeptidase, S33 JMW47_RS03745 PF03190 Protein of unknown function, DUF255 JMW47_RS03750 PF05067 Manganese containing catalase JMW47_RS03755 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMW47_RS03755 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain JMW47_RS03755 PF00205 Thiamine pyrophosphate enzyme, central domain JMW47_RS03760 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain JMW47_RS03760 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain JMW47_RS03775 PF13478 XdhC Rossmann domain JMW47_RS03775 PF02625 XdhC and CoxI family JMW47_RS03785 PF11738 Protein of unknown function (DUF3298) JMW47_RS03785 PF13739 Deacetylase PdaC JMW47_RS03790 PF04542 Sigma-70 region 2 JMW47_RS03790 PF08281 Sigma-70, region 4 JMW47_RS03800 PF01522 Polysaccharide deacetylase JMW47_RS03805 PF13520 Amino acid permease JMW47_RS03810 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase JMW47_RS03810 PF01502 Phosphoribosyl-AMP cyclohydrolase JMW47_RS03815 PF00977 Histidine biosynthesis protein JMW47_RS03820 PF00977 Histidine biosynthesis protein JMW47_RS03825 PF00117 Glutamine amidotransferase class-I JMW47_RS03830 PF00475 Imidazoleglycerol-phosphate dehydratase JMW47_RS03835 PF00155 Aminotransferase class I and II JMW47_RS03840 PF01634 ATP phosphoribosyltransferase JMW47_RS03845 PF13393 Histidyl-tRNA synthetase JMW47_RS03855 PF03006 Haemolysin-III related JMW47_RS03870 PF02525 Flavodoxin-like fold JMW47_RS03880 PF01554 MatE JMW47_RS03885 PF02687 FtsX-like permease family JMW47_RS03890 PF00005 ABC transporter JMW47_RS03895 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS03895 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS03895 PF00563 EAL domain JMW47_RS03900 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JMW47_RS03900 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS03900 PF13247 4Fe-4S dicluster domain JMW47_RS03905 PF00175 Oxidoreductase NAD-binding domain JMW47_RS03905 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JMW47_RS03920 PF02687 FtsX-like permease family JMW47_RS03925 PF00005 ABC transporter JMW47_RS03930 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS03930 PF00072 Response regulator receiver domain JMW47_RS03935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS03945 PF00005 ABC transporter JMW47_RS03945 PF02687 FtsX-like permease family JMW47_RS03945 PF12704 MacB-like periplasmic core domain JMW47_RS03950 PF02687 FtsX-like permease family JMW47_RS03950 PF12704 MacB-like periplasmic core domain JMW47_RS03955 PF01979 Amidohydrolase family JMW47_RS03960 PF04015 Domain of unknown function (DUF362) JMW47_RS03965 PF02915 Rubrerythrin JMW47_RS03975 PF01522 Polysaccharide deacetylase JMW47_RS03975 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain JMW47_RS03980 PF00579 tRNA synthetases class I (W and Y) JMW47_RS03980 PF01479 S4 domain JMW47_RS04000 PF07664 Ferrous iron transport protein B C terminus JMW47_RS04000 PF17910 FeoB cytosolic helical domain JMW47_RS04000 PF07670 Nucleoside recognition JMW47_RS04000 PF02421 Ferrous iron transport protein B JMW47_RS04005 PF13411 MerR HTH family regulatory protein JMW47_RS04005 PF06445 GyrI-like small molecule binding domain JMW47_RS04010 PF13426 PAS domain JMW47_RS04010 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS04010 PF00563 EAL domain JMW47_RS04020 PF02548 Ketopantoate hydroxymethyltransferase JMW47_RS04025 PF02569 Pantoate-beta-alanine ligase JMW47_RS04050 PF12801 4Fe-4S binding domain JMW47_RS04050 PF04205 FMN-binding domain JMW47_RS04065 PF01554 MatE JMW47_RS04075 PF00005 ABC transporter JMW47_RS04085 PF01791 DeoC/LacD family aldolase JMW47_RS04090 PF03023 Lipid II flippase MurJ JMW47_RS04100 PF03773 Predicted permease JMW47_RS04105 PF07683 Cobalamin synthesis protein cobW C-terminal domain JMW47_RS04105 PF02492 CobW/HypB/UreG, nucleotide-binding domain JMW47_RS04110 PF00950 ABC 3 transport family JMW47_RS04115 PF00005 ABC transporter JMW47_RS04120 PF01297 Zinc-uptake complex component A periplasmic JMW47_RS04130 PF04542 Sigma-70 region 2 JMW47_RS04130 PF04539 Sigma-70 region 3 JMW47_RS04130 PF04545 Sigma-70, region 4 JMW47_RS04130 PF00140 Sigma-70 factor, region 1.2 JMW47_RS04130 PF03979 Sigma-70 factor, region 1.1 JMW47_RS04140 PF06207 Protein of unknown function (DUF1002) JMW47_RS04145 PF03807 NADP oxidoreductase coenzyme F420-dependent JMW47_RS04145 PF14748 Pyrroline-5-carboxylate reductase dimerisation JMW47_RS04155 PF02245 Methylpurine-DNA glycosylase (MPG) JMW47_RS04160 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS04160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS04160 PF00989 PAS fold JMW47_RS04160 PF16736 Single Cache-like JMW47_RS04165 PF03180 NLPA lipoprotein JMW47_RS04170 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS04175 PF00005 ABC transporter JMW47_RS04175 PF09383 NIL domain JMW47_RS04205 PF00005 ABC transporter JMW47_RS04210 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS04225 PF07664 Ferrous iron transport protein B C terminus JMW47_RS04225 PF17910 FeoB cytosolic helical domain JMW47_RS04225 PF07670 Nucleoside recognition JMW47_RS04225 PF02421 Ferrous iron transport protein B JMW47_RS04240 PF00563 EAL domain JMW47_RS04240 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS04240 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS04245 PF01738 Dienelactone hydrolase family JMW47_RS04250 PF02915 Rubrerythrin JMW47_RS04255 PF00005 ABC transporter JMW47_RS04255 PF00664 ABC transporter transmembrane region JMW47_RS04260 PF00664 ABC transporter transmembrane region JMW47_RS04260 PF00005 ABC transporter JMW47_RS04265 PF01061 ABC-2 type transporter JMW47_RS04270 PF00581 Rhodanese-like domain JMW47_RS04270 PF17773 UPF0176 acylphosphatase like domain JMW47_RS04270 PF12368 Rhodanase C-terminal JMW47_RS04275 PF00144 Beta-lactamase JMW47_RS04290 PF02687 FtsX-like permease family JMW47_RS04290 PF12704 MacB-like periplasmic core domain JMW47_RS04290 PF00005 ABC transporter JMW47_RS04295 PF00672 HAMP domain JMW47_RS04295 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS04295 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS04300 PF00072 Response regulator receiver domain JMW47_RS04300 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS04310 PF00155 Aminotransferase class I and II JMW47_RS04310 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS04330 PF03358 NADPH-dependent FMN reductase JMW47_RS04335 PF01784 NIF3 (NGG1p interacting factor 3) JMW47_RS04340 PF04816 tRNA (adenine(22)-N(1))-methyltransferase JMW47_RS04345 PF00140 Sigma-70 factor, region 1.2 JMW47_RS04345 PF04545 Sigma-70, region 4 JMW47_RS04345 PF03979 Sigma-70 factor, region 1.1 JMW47_RS04345 PF04539 Sigma-70 region 3 JMW47_RS04345 PF04542 Sigma-70 region 2 JMW47_RS04350 PF10410 DnaB-helicase binding domain of primase JMW47_RS04350 PF01807 CHC2 zinc finger JMW47_RS04350 PF08275 DNA primase catalytic core, N-terminal domain JMW47_RS04355 PF00793 DAHP synthetase I family JMW47_RS04355 PF18152 DAHP synthase ferredoxin-like domain JMW47_RS04360 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) JMW47_RS04365 PF02152 Dihydroneopterin aldolase JMW47_RS04370 PF00809 Pterin binding enzyme JMW47_RS04375 PF01227 GTP cyclohydrolase I JMW47_RS04385 PF01063 Amino-transferase class IV JMW47_RS04390 PF04715 Anthranilate synthase component I, N terminal region JMW47_RS04390 PF00425 chorismate binding enzyme JMW47_RS04395 PF00117 Glutamine amidotransferase class-I JMW47_RS04400 PF01522 Polysaccharide deacetylase JMW47_RS04400 PF13739 Deacetylase PdaC JMW47_RS04400 PF11738 Protein of unknown function (DUF3298) JMW47_RS04405 PF00188 Cysteine-rich secretory protein family JMW47_RS04415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMW47_RS04415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMW47_RS04420 PF04172 LrgB-like family JMW47_RS04425 PF03788 LrgA family JMW47_RS04435 PF13188 PAS domain JMW47_RS04435 PF00158 Sigma-54 interaction domain JMW47_RS04435 PF02954 Bacterial regulatory protein, Fis family JMW47_RS04440 PF04294 VanW like protein JMW47_RS04455 PF00578 AhpC/TSA family JMW47_RS04455 PF10417 C-terminal domain of 1-Cys peroxiredoxin JMW47_RS04460 PF00075 RNase H JMW47_RS04465 PF13307 Helicase C-terminal domain JMW47_RS04465 PF00929 Exonuclease JMW47_RS04470 PF01522 Polysaccharide deacetylase JMW47_RS04480 PF02308 MgtC family JMW47_RS04490 PF06445 GyrI-like small molecule binding domain JMW47_RS04490 PF13411 MerR HTH family regulatory protein JMW47_RS04495 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS04495 PF00563 EAL domain JMW47_RS04495 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS04500 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS04505 PF00563 EAL domain JMW47_RS04505 PF13426 PAS domain JMW47_RS04505 PF08447 PAS fold JMW47_RS04505 PF08448 PAS fold JMW47_RS04505 PF05231 MASE1 JMW47_RS04505 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS04510 PF00589 Phage integrase family JMW47_RS04510 PF02899 Phage integrase, N-terminal SAM-like domain JMW47_RS04535 PF04055 Radical SAM superfamily JMW47_RS04535 PF16199 Radical_SAM C-terminal domain JMW47_RS04545 PF00158 Sigma-54 interaction domain JMW47_RS04545 PF13188 PAS domain JMW47_RS04545 PF02954 Bacterial regulatory protein, Fis family JMW47_RS04560 PF00994 Probable molybdopterin binding domain JMW47_RS04560 PF18146 Damage-inducible protein CinA KH domain JMW47_RS04560 PF02464 Competence-damaged protein JMW47_RS04565 PF01820 D-ala D-ala ligase N-terminus JMW47_RS04565 PF07478 D-ala D-ala ligase C-terminus JMW47_RS04570 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS04570 PF00155 Aminotransferase class I and II JMW47_RS04605 PF00501 AMP-binding enzyme JMW47_RS04605 PF13193 AMP-binding enzyme C-terminal domain JMW47_RS04605 PF00668 Condensation domain JMW47_RS04605 PF00550 Phosphopantetheine attachment site JMW47_RS04610 PF03009 Glycerophosphoryl diester phosphodiesterase family JMW47_RS04625 PF17676 LD-carboxypeptidase C-terminal domain JMW47_RS04625 PF02016 LD-carboxypeptidase N-terminal domain JMW47_RS04630 PF07687 Peptidase dimerisation domain JMW47_RS04630 PF01546 Peptidase family M20/M25/M40 JMW47_RS04635 PF01980 tRNA-methyltransferase O JMW47_RS04635 PF18389 TrmO C-terminal domain JMW47_RS04665 PF02129 X-Pro dipeptidyl-peptidase (S15 family) JMW47_RS04665 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain JMW47_RS04675 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain JMW47_RS04675 PF13378 Enolase C-terminal domain-like JMW47_RS04680 PF01381 Helix-turn-helix JMW47_RS04680 PF08671 Anti-repressor SinI JMW47_RS04685 PF02626 Carboxyltransferase domain, subdomain A and B JMW47_RS04690 PF02682 Carboxyltransferase domain, subdomain C and D JMW47_RS04695 PF01566 Natural resistance-associated macrophage protein JMW47_RS04700 PF03746 LamB/YcsF family JMW47_RS04705 PF03600 Citrate transporter JMW47_RS04705 PF02080 TrkA-C domain JMW47_RS04710 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMW47_RS04710 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMW47_RS04720 PF07690 Major Facilitator Superfamily JMW47_RS04725 PF01381 Helix-turn-helix JMW47_RS04740 PF01381 Helix-turn-helix JMW47_RS04770 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) JMW47_RS04775 PF04865 Baseplate J-like protein JMW47_RS04790 PF01476 LysM domain JMW47_RS04790 PF08239 Bacterial SH3 domain JMW47_RS04790 PF00877 NlpC/P60 family JMW47_RS04830 PF01381 Helix-turn-helix JMW47_RS04855 PF00313 'Cold-shock' DNA-binding domain JMW47_RS04870 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS04870 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS04885 PF00005 ABC transporter JMW47_RS04905 PF03551 Transcriptional regulator PadR-like family JMW47_RS04910 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JMW47_RS04910 PF04101 Glycosyltransferase family 28 C-terminal domain JMW47_RS04925 PF03372 Endonuclease/Exonuclease/phosphatase family JMW47_RS04935 PF00155 Aminotransferase class I and II JMW47_RS04945 PF00206 Lyase JMW47_RS04945 PF10415 Fumarase C C-terminus JMW47_RS04955 PF02673 Bacitracin resistance protein BacA JMW47_RS04960 PF10502 Signal peptidase, peptidase S26 JMW47_RS04970 PF12323 Helix-turn-helix domain JMW47_RS04970 PF01385 Probable transposase JMW47_RS04970 PF07282 Putative transposase DNA-binding domain JMW47_RS04980 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS04980 PF13426 PAS domain JMW47_RS04980 PF00563 EAL domain JMW47_RS04985 PF12072 Domain of unknown function (DUF3552) JMW47_RS04985 PF00013 KH domain JMW47_RS04985 PF01966 HD domain JMW47_RS04990 PF00154 recA bacterial DNA recombination protein JMW47_RS04995 PF01066 CDP-alcohol phosphatidyltransferase JMW47_RS05000 PF04055 Radical SAM superfamily JMW47_RS05000 PF18693 TRAM domain JMW47_RS05000 PF00919 Uncharacterized protein family UPF0004 JMW47_RS05010 PF17854 FtsK alpha domain JMW47_RS05010 PF09397 Ftsk gamma domain JMW47_RS05010 PF01580 FtsK/SpoIIIE family JMW47_RS05015 PF00574 Clp protease JMW47_RS05020 PF13840 ACT domain JMW47_RS05020 PF00696 Amino acid kinase family JMW47_RS05025 PF05239 PRC-barrel domain JMW47_RS05030 PF00675 Insulinase (Peptidase family M16) JMW47_RS05030 PF05193 Peptidase M16 inactive domain JMW47_RS05035 PF01522 Polysaccharide deacetylase JMW47_RS05035 PF11738 Protein of unknown function (DUF3298) JMW47_RS05035 PF13739 Deacetylase PdaC JMW47_RS05040 PF00575 S1 RNA binding domain JMW47_RS05040 PF03725 3' exoribonuclease family, domain 2 JMW47_RS05040 PF01138 3' exoribonuclease family, domain 1 JMW47_RS05040 PF00013 KH domain JMW47_RS05040 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain JMW47_RS05045 PF02645 Uncharacterised protein, DegV family COG1307 JMW47_RS05050 PF00312 Ribosomal protein S15 JMW47_RS05055 PF01687 Riboflavin kinase JMW47_RS05055 PF06574 FAD synthetase JMW47_RS05060 PF16198 tRNA pseudouridylate synthase B C-terminal domain JMW47_RS05060 PF01509 TruB family pseudouridylate synthase (N terminal domain) JMW47_RS05065 PF02272 DHHA1 domain JMW47_RS05065 PF01368 DHH family JMW47_RS05070 PF02033 Ribosome-binding factor A JMW47_RS05075 PF00009 Elongation factor Tu GTP binding domain JMW47_RS05075 PF11987 Translation-initiation factor 2 JMW47_RS05075 PF04760 Translation initiation factor IF-2, N-terminal region JMW47_RS05080 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family JMW47_RS05085 PF04296 Protein of unknown function (DUF448) JMW47_RS05090 PF08529 NusA N-terminal domain JMW47_RS05090 PF00575 S1 RNA binding domain JMW47_RS05090 PF13184 NusA-like KH domain JMW47_RS05095 PF17384 RimP C-terminal SH3 domain JMW47_RS05095 PF02576 RimP N-terminal domain JMW47_RS05100 PF01336 OB-fold nucleic acid binding domain JMW47_RS05100 PF02811 PHP domain JMW47_RS05100 PF00929 Exonuclease JMW47_RS05100 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMW47_RS05100 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMW47_RS05100 PF14579 Helix-hairpin-helix motif JMW47_RS05100 PF11490 DNA polymerase III polC-type N-terminus II JMW47_RS05105 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMW47_RS05105 PF13457 GW (Gly-Tryp) dipeptide domain JMW47_RS05110 PF02146 Sir2 family JMW47_RS05130 PF02789 Cytosol aminopeptidase family, N-terminal domain JMW47_RS05130 PF00883 Cytosol aminopeptidase family, catalytic domain JMW47_RS05150 PF04079 Segregation and condensation complex subunit ScpB JMW47_RS05155 PF02616 Segregation and condensation protein ScpA JMW47_RS05160 PF02163 Peptidase family M50 JMW47_RS05165 PF12833 Helix-turn-helix domain JMW47_RS05165 PF02311 AraC-like ligand binding domain JMW47_RS05175 PF07943 Penicillin-binding protein 5, C-terminal domain JMW47_RS05175 PF00768 D-alanyl-D-alanine carboxypeptidase JMW47_RS05185 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain JMW47_RS05185 PF00753 Metallo-beta-lactamase superfamily JMW47_RS05185 PF17770 Ribonuclease J C-terminal domain JMW47_RS05195 PF01475 Ferric uptake regulator family JMW47_RS05200 PF06949 Protein of unknown function (DUF1292) JMW47_RS05205 PF03652 Holliday junction resolvase JMW47_RS05215 PF06135 IreB regulatory phosphoprotein JMW47_RS05220 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMW47_RS05220 PF02272 DHHA1 domain JMW47_RS05220 PF01411 tRNA synthetases class II (A) JMW47_RS05230 PF01592 NifU-like N terminal domain JMW47_RS05235 PF00266 Aminotransferase class-V JMW47_RS05240 PF02082 Transcriptional regulator JMW47_RS05250 PF16193 AAA C-terminal domain JMW47_RS05250 PF12002 MgsA AAA+ ATPase C terminal JMW47_RS05250 PF05496 Holliday junction DNA helicase RuvB P-loop domain JMW47_RS05255 PF08222 CodY helix-turn-helix domain JMW47_RS05255 PF06018 CodY GAF-like domain JMW47_RS05260 PF01751 Toprim domain JMW47_RS05260 PF01396 Topoisomerase DNA binding C4 zinc finger JMW47_RS05260 PF01131 DNA topoisomerase JMW47_RS05265 PF17782 DprA winged helix domain JMW47_RS05265 PF02481 DNA recombination-mediator protein A JMW47_RS05270 PF13335 Magnesium chelatase, subunit ChlI C-terminal JMW47_RS05270 PF01078 Magnesium chelatase, subunit ChlI JMW47_RS05275 PF02021 Uncharacterised protein family UPF0102 JMW47_RS05280 PF07730 Histidine kinase JMW47_RS05285 PF00072 Response regulator receiver domain JMW47_RS05285 PF00196 Bacterial regulatory proteins, luxR family JMW47_RS05290 PF00005 ABC transporter JMW47_RS05315 PF01070 FMN-dependent dehydrogenase JMW47_RS05320 PF01351 Ribonuclease HII JMW47_RS05325 PF02867 Ribonucleotide reductase, barrel domain JMW47_RS05325 PF03477 ATP cone domain JMW47_RS05325 PF00317 Ribonucleotide reductase, all-alpha domain JMW47_RS05330 PF05525 Branched-chain amino acid transport protein JMW47_RS05335 PF05525 Branched-chain amino acid transport protein JMW47_RS05340 PF01926 50S ribosome-binding GTPase JMW47_RS05345 PF01245 Ribosomal protein L19 JMW47_RS05350 PF01746 tRNA (Guanine-1)-methyltransferase JMW47_RS05355 PF05239 PRC-barrel domain JMW47_RS05355 PF01782 RimM N-terminal domain JMW47_RS05365 PF00886 Ribosomal protein S16 JMW47_RS05370 PF02881 SRP54-type protein, helical bundle domain JMW47_RS05370 PF00448 SRP54-type protein, GTPase domain JMW47_RS05370 PF02978 Signal peptide binding domain JMW47_RS05375 PF04297 Putative helix-turn-helix protein, YlxM / p13 like JMW47_RS05380 PF00448 SRP54-type protein, GTPase domain JMW47_RS05380 PF02881 SRP54-type protein, helical bundle domain JMW47_RS05385 PF06470 SMC proteins Flexible Hinge Domain JMW47_RS05385 PF02463 RecF/RecN/SMC N terminal domain JMW47_RS05395 PF00035 Double-stranded RNA binding motif JMW47_RS05395 PF14622 Ribonuclease-III-like JMW47_RS05405 PF09285 Elongation factor P, C-terminal JMW47_RS05405 PF08207 Elongation factor P (EF-P) KOW-like domain JMW47_RS05405 PF01132 Elongation factor P (EF-P) OB domain JMW47_RS05430 PF04542 Sigma-70 region 2 JMW47_RS05430 PF04545 Sigma-70, region 4 JMW47_RS05440 PF04892 VanZ like family JMW47_RS05495 PF04542 Sigma-70 region 2 JMW47_RS05495 PF04545 Sigma-70, region 4 JMW47_RS05500 PF03793 PASTA domain JMW47_RS05500 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS05500 PF03717 Penicillin-binding Protein dimerisation domain JMW47_RS05505 PF16325 Peptidase family U32 C-terminal domain JMW47_RS05505 PF01136 Peptidase family U32 JMW47_RS05510 PF01596 O-methyltransferase JMW47_RS05515 PF02618 YceG-like family JMW47_RS05520 PF00591 Glycosyl transferase family, a/b domain JMW47_RS05520 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain JMW47_RS05520 PF02885 Glycosyl transferase family, helical bundle domain JMW47_RS05525 PF01048 Phosphorylase superfamily JMW47_RS05530 PF01676 Metalloenzyme superfamily JMW47_RS05535 PF00589 Phage integrase family JMW47_RS05535 PF02899 Phage integrase, N-terminal SAM-like domain JMW47_RS05545 PF00293 NUDIX domain JMW47_RS05560 PF00535 Glycosyl transferase family 2 JMW47_RS05575 PF00072 Response regulator receiver domain JMW47_RS05575 PF08769 Sporulation initiation factor Spo0A C terminal JMW47_RS05580 PF05580 SpoIVB peptidase S55 JMW47_RS05580 PF17820 PDZ domain JMW47_RS05585 PF00583 Acetyltransferase (GNAT) family JMW47_RS05590 PF00583 Acetyltransferase (GNAT) family JMW47_RS05600 PF02463 RecF/RecN/SMC N terminal domain JMW47_RS05605 PF01479 S4 domain JMW47_RS05605 PF01728 FtsJ-like methyltransferase JMW47_RS05610 PF13292 1-deoxy-D-xylulose-5-phosphate synthase JMW47_RS05610 PF02779 Transketolase, pyrimidine binding domain JMW47_RS05610 PF02780 Transketolase, C-terminal domain JMW47_RS05615 PF02681 Divergent PAP2 family JMW47_RS05620 PF00348 Polyprenyl synthetase JMW47_RS05625 PF02609 Exonuclease VII small subunit JMW47_RS05630 PF02601 Exonuclease VII, large subunit JMW47_RS05630 PF13742 OB-fold nucleic acid binding domain JMW47_RS05635 PF00814 Glycoprotease family JMW47_RS05640 PF01029 NusB family JMW47_RS05645 PF03780 Asp23 family, cell envelope-related function JMW47_RS05650 PF12685 SpoIIIAH-like protein JMW47_RS05690 PF06874 Firmicute fructose-1,6-bisphosphatase JMW47_RS05700 PF13520 Amino acid permease JMW47_RS05705 PF07722 Peptidase C26 JMW47_RS05715 PF02954 Bacterial regulatory protein, Fis family JMW47_RS05715 PF13426 PAS domain JMW47_RS05715 PF00158 Sigma-54 interaction domain JMW47_RS05720 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS05720 PF07694 5TMR of 5TMR-LYT JMW47_RS05725 PF00109 Beta-ketoacyl synthase, N-terminal domain JMW47_RS05725 PF02801 Beta-ketoacyl synthase, C-terminal domain JMW47_RS05730 PF00550 Phosphopantetheine attachment site JMW47_RS05740 PF00698 Acyl transferase domain JMW47_RS05745 PF03060 Nitronate monooxygenase JMW47_RS05750 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JMW47_RS05750 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal JMW47_RS05755 PF02504 Fatty acid synthesis protein JMW47_RS05765 PF01783 Ribosomal L32p protein family JMW47_RS05775 PF00871 Acetokinase family JMW47_RS05780 PF05636 HIGH Nucleotidyl Transferase JMW47_RS05785 PF02913 FAD linked oxidases, C-terminal domain JMW47_RS05785 PF01565 FAD binding domain JMW47_RS05790 PF00766 Electron transfer flavoprotein FAD-binding domain JMW47_RS05790 PF01012 Electron transfer flavoprotein domain JMW47_RS05795 PF01012 Electron transfer flavoprotein domain JMW47_RS05800 PF09861 Lactate racemase N-terminal domain JMW47_RS05805 PF07729 FCD domain JMW47_RS05805 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS05810 PF07670 Nucleoside recognition JMW47_RS05820 PF01842 ACT domain JMW47_RS05820 PF00742 Homoserine dehydrogenase JMW47_RS05820 PF03447 Homoserine dehydrogenase, NAD binding domain JMW47_RS05830 PF01018 GTP1/OBG JMW47_RS05830 PF01926 50S ribosome-binding GTPase JMW47_RS05830 PF09269 Domain of unknown function (DUF1967) JMW47_RS05835 PF01016 Ribosomal L27 protein JMW47_RS05845 PF00829 Ribosomal prokaryotic L21 protein JMW47_RS05850 PF10150 Ribonuclease E/G family JMW47_RS05850 PF00575 S1 RNA binding domain JMW47_RS05865 PF00753 Metallo-beta-lactamase superfamily JMW47_RS05865 PF00258 Flavodoxin JMW47_RS05880 PF03551 Transcriptional regulator PadR-like family JMW47_RS05885 PF02142 MGS-like domain JMW47_RS05890 PF01098 Cell cycle protein JMW47_RS05895 PF03776 Septum formation topological specificity factor MinE JMW47_RS05900 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JMW47_RS05905 PF03775 Septum formation inhibitor MinC, C-terminal domain JMW47_RS05910 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS05930 PF04002 RadC-like JAB domain JMW47_RS05935 PF02545 Maf-like protein JMW47_RS05940 PF04060 Putative Fe-S cluster JMW47_RS05940 PF00037 4Fe-4S binding domain JMW47_RS05940 PF13187 4Fe-4S dicluster domain JMW47_RS05945 PF02508 Rnf-Nqr subunit, membrane protein JMW47_RS05950 PF02508 Rnf-Nqr subunit, membrane protein JMW47_RS05955 PF04205 FMN-binding domain JMW47_RS05960 PF03116 NQR2, RnfD, RnfE family JMW47_RS05965 PF10531 SLBB domain JMW47_RS05965 PF13375 RnfC Barrel sandwich hybrid domain JMW47_RS05965 PF13237 4Fe-4S dicluster domain JMW47_RS05965 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JMW47_RS05975 PF00877 NlpC/P60 family JMW47_RS05980 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMW47_RS05995 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMW47_RS06005 PF01121 Dephospho-CoA kinase JMW47_RS06010 PF00476 DNA polymerase family A JMW47_RS06010 PF01367 5'-3' exonuclease, C-terminal SAM fold JMW47_RS06010 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain JMW47_RS06020 PF03062 MBOAT, membrane-bound O-acyltransferase family JMW47_RS06045 PF12833 Helix-turn-helix domain JMW47_RS06045 PF06445 GyrI-like small molecule binding domain JMW47_RS06070 PF07883 Cupin domain JMW47_RS06070 PF01381 Helix-turn-helix JMW47_RS06075 PF04055 Radical SAM superfamily JMW47_RS06080 PF02901 Pyruvate formate lyase-like JMW47_RS06080 PF01228 Glycine radical JMW47_RS06095 PF00072 Response regulator receiver domain JMW47_RS06095 PF04397 LytTr DNA-binding domain JMW47_RS06105 PF02535 ZIP Zinc transporter JMW47_RS06110 PF07687 Peptidase dimerisation domain JMW47_RS06110 PF01546 Peptidase family M20/M25/M40 JMW47_RS06120 PF00005 ABC transporter JMW47_RS06120 PF00664 ABC transporter transmembrane region JMW47_RS06125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS06130 PF02606 Tetraacyldisaccharide-1-P 4'-kinase JMW47_RS06135 PF03453 MoeA N-terminal region (domain I and II) JMW47_RS06135 PF00994 Probable molybdopterin binding domain JMW47_RS06135 PF03454 MoeA C-terminal region (domain IV) JMW47_RS06145 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS06145 PF03466 LysR substrate binding domain JMW47_RS06150 PF03613 PTS system mannose/fructose/sorbose family IID component JMW47_RS06155 PF03609 PTS system sorbose-specific iic component JMW47_RS06160 PF03830 PTS system sorbose subfamily IIB component JMW47_RS06175 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS06175 PF07702 UTRA domain JMW47_RS06180 PF02127 Aminopeptidase I zinc metalloprotease (M18) JMW47_RS06185 PF05979 Bacterial protein of unknown function (DUF896) JMW47_RS06190 PF00155 Aminotransferase class I and II JMW47_RS06195 PF02811 PHP domain JMW47_RS06225 PF00356 Bacterial regulatory proteins, lacI family JMW47_RS06250 PF00550 Phosphopantetheine attachment site JMW47_RS06260 PF00849 RNA pseudouridylate synthase JMW47_RS06265 PF02803 Thiolase, C-terminal domain JMW47_RS06265 PF00108 Thiolase, N-terminal domain JMW47_RS06270 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain JMW47_RS06270 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain JMW47_RS06275 PF00378 Enoyl-CoA hydratase/isomerase JMW47_RS06280 PF00766 Electron transfer flavoprotein FAD-binding domain JMW47_RS06280 PF01012 Electron transfer flavoprotein domain JMW47_RS06285 PF01012 Electron transfer flavoprotein domain JMW47_RS06290 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JMW47_RS06290 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JMW47_RS06290 PF02770 Acyl-CoA dehydrogenase, middle domain JMW47_RS06295 PF04073 Aminoacyl-tRNA editing domain JMW47_RS06310 PF00005 ABC transporter JMW47_RS06315 PF01513 ATP-NAD kinase JMW47_RS06320 PF12850 Calcineurin-like phosphoesterase superfamily domain JMW47_RS06330 PF01546 Peptidase family M20/M25/M40 JMW47_RS06330 PF07687 Peptidase dimerisation domain JMW47_RS06335 PF01594 AI-2E family transporter JMW47_RS06340 PF03471 Transporter associated domain JMW47_RS06340 PF01595 Cyclin M transmembrane N-terminal domain JMW47_RS06340 PF00571 CBS domain JMW47_RS06345 PF13175 AAA ATPase domain JMW47_RS06350 PF00149 Calcineurin-like phosphoesterase JMW47_RS06350 PF12320 Type 5 capsule protein repressor C-terminal domain JMW47_RS06355 PF12705 PD-(D/E)XK nuclease superfamily JMW47_RS06355 PF00580 UvrD/REP helicase N-terminal domain JMW47_RS06355 PF13361 UvrD-like helicase C-terminal domain JMW47_RS06360 PF12705 PD-(D/E)XK nuclease superfamily JMW47_RS06370 PF13361 UvrD-like helicase C-terminal domain JMW47_RS06370 PF00580 UvrD/REP helicase N-terminal domain JMW47_RS06380 PF04122 Putative cell wall binding repeat 2 JMW47_RS06380 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS06385 PF08239 Bacterial SH3 domain JMW47_RS06385 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS06410 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase JMW47_RS06410 PF01476 LysM domain JMW47_RS06415 PF02350 UDP-N-acetylglucosamine 2-epimerase JMW47_RS06425 PF03170 Bacterial cellulose synthase subunit JMW47_RS06435 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) JMW47_RS06445 PF13416 Bacterial extracellular solute-binding protein JMW47_RS06450 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS06455 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS06460 PF00005 ABC transporter JMW47_RS06460 PF08402 TOBE domain JMW47_RS06490 PF00005 ABC transporter JMW47_RS06490 PF00664 ABC transporter transmembrane region JMW47_RS06495 PF00005 ABC transporter JMW47_RS06495 PF00664 ABC transporter transmembrane region JMW47_RS06500 PF13411 MerR HTH family regulatory protein JMW47_RS06500 PF06445 GyrI-like small molecule binding domain JMW47_RS06510 PF00563 EAL domain JMW47_RS06510 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS06510 PF13426 PAS domain JMW47_RS06515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS06515 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS06515 PF00989 PAS fold JMW47_RS06515 PF16736 Single Cache-like JMW47_RS06520 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS06520 PF00072 Response regulator receiver domain JMW47_RS06530 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase JMW47_RS06535 PF01979 Amidohydrolase family JMW47_RS06540 PF07702 UTRA domain JMW47_RS06540 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS06555 PF00005 ABC transporter JMW47_RS06555 PF12704 MacB-like periplasmic core domain JMW47_RS06555 PF02687 FtsX-like permease family JMW47_RS06560 PF18698 Histidine kinase sensor domain JMW47_RS06560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS06560 PF00989 PAS fold JMW47_RS06560 PF00672 HAMP domain JMW47_RS06560 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS06565 PF00072 Response regulator receiver domain JMW47_RS06565 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS06580 PF03949 Malic enzyme, NAD binding domain JMW47_RS06580 PF00390 Malic enzyme, N-terminal domain JMW47_RS06590 PF05681 Fumarate hydratase (Fumerase) JMW47_RS06595 PF04073 Aminoacyl-tRNA editing domain JMW47_RS06600 PF00005 ABC transporter JMW47_RS06615 PF04055 Radical SAM superfamily JMW47_RS06615 PF08497 Radical SAM N-terminal JMW47_RS06615 PF11842 Domain of unknown function (DUF3362) JMW47_RS06620 PF13426 PAS domain JMW47_RS06620 PF08447 PAS fold JMW47_RS06620 PF05231 MASE1 JMW47_RS06620 PF00563 EAL domain JMW47_RS06620 PF08448 PAS fold JMW47_RS06620 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS06630 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMW47_RS06630 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMW47_RS06635 PF00266 Aminotransferase class-V JMW47_RS06645 PF00180 Isocitrate/isopropylmalate dehydrogenase JMW47_RS06650 PF00694 Aconitase C-terminal domain JMW47_RS06655 PF00330 Aconitase family (aconitate hydratase) JMW47_RS06660 PF00682 HMGL-like JMW47_RS06660 PF08502 LeuA allosteric (dimerisation) domain JMW47_RS06675 PF02401 LytB protein JMW47_RS06675 PF00575 S1 RNA binding domain JMW47_RS06680 PF01554 MatE JMW47_RS06710 PF16916 Dimerisation domain of Zinc Transporter JMW47_RS06710 PF01545 Cation efflux family JMW47_RS06715 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS06720 PF00005 ABC transporter JMW47_RS06720 PF00571 CBS domain JMW47_RS06725 PF11799 impB/mucB/samB family C-terminal domain JMW47_RS06725 PF11798 IMS family HHH motif JMW47_RS06725 PF00817 impB/mucB/samB family JMW47_RS06730 PF08903 Domain of unknown function (DUF1846) JMW47_RS06750 PF02906 Iron only hydrogenase large subunit, C-terminal domain JMW47_RS06750 PF13187 4Fe-4S dicluster domain JMW47_RS06760 PF00313 'Cold-shock' DNA-binding domain JMW47_RS06765 PF00491 Arginase family JMW47_RS06770 PF17284 Spermidine synthase tetramerisation domain JMW47_RS06775 PF02675 S-adenosylmethionine decarboxylase JMW47_RS06780 PF01276 Orn/Lys/Arg decarboxylase, major domain JMW47_RS06780 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JMW47_RS06785 PF07729 FCD domain JMW47_RS06785 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS06790 PF02903 Alpha amylase, N-terminal ig-like domain JMW47_RS06790 PF00128 Alpha amylase, catalytic domain JMW47_RS06790 PF00395 S-layer homology domain JMW47_RS06795 PF00343 Carbohydrate phosphorylase JMW47_RS06800 PF08323 Starch synthase catalytic domain JMW47_RS06800 PF00534 Glycosyl transferases group 1 JMW47_RS06805 PF00483 Nucleotidyl transferase JMW47_RS06810 PF00483 Nucleotidyl transferase JMW47_RS06815 PF01145 SPFH domain / Band 7 family JMW47_RS06825 PF03853 YjeF-related protein N-terminus JMW47_RS06825 PF01256 Carbohydrate kinase JMW47_RS06830 PF02653 Branched-chain amino acid transport system / permease component JMW47_RS06835 PF00005 ABC transporter JMW47_RS06840 PF04392 ABC transporter substrate binding protein JMW47_RS06845 PF02653 Branched-chain amino acid transport system / permease component JMW47_RS06850 PF00005 ABC transporter JMW47_RS06860 PF14602 Hexapeptide repeat of succinyl-transferase JMW47_RS06860 PF12464 Maltose acetyltransferase JMW47_RS06865 PF12857 TOBE-like domain JMW47_RS06865 PF00005 ABC transporter JMW47_RS06865 PF17850 CysA C-terminal regulatory domain JMW47_RS06870 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS06880 PF12728 Helix-turn-helix domain JMW47_RS06880 PF12727 PBP superfamily domain JMW47_RS06890 PF12146 Serine aminopeptidase, S33 JMW47_RS06895 PF01661 Macro domain JMW47_RS06900 PF02056 Family 4 glycosyl hydrolase JMW47_RS06900 PF11975 Family 4 glycosyl hydrolase C-terminal domain JMW47_RS06910 PF02378 Phosphotransferase system, EIIC JMW47_RS06915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS06925 PF00874 PRD domain JMW47_RS06925 PF00158 Sigma-54 interaction domain JMW47_RS06925 PF03610 PTS system fructose IIA component JMW47_RS06930 PF00005 ABC transporter JMW47_RS06930 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMW47_RS06935 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMW47_RS06935 PF00005 ABC transporter JMW47_RS06940 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMW47_RS06945 PF12911 N-terminal TM domain of oligopeptide transport permease C JMW47_RS06945 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS06950 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS06965 PF01106 NifU-like domain JMW47_RS06975 PF07282 Putative transposase DNA-binding domain JMW47_RS06975 PF12323 Helix-turn-helix domain JMW47_RS06975 PF01385 Probable transposase JMW47_RS07005 PF00534 Glycosyl transferases group 1 JMW47_RS07005 PF13439 Glycosyltransferase Family 4 JMW47_RS07015 PF02142 MGS-like domain JMW47_RS07015 PF01808 AICARFT/IMPCHase bienzyme JMW47_RS07020 PF01557 Fumarylacetoacetate (FAA) hydrolase family JMW47_RS07045 PF01047 MarR family JMW47_RS07050 PF00180 Isocitrate/isopropylmalate dehydrogenase JMW47_RS07050 PF18324 Hypothetical protein TT1725 JMW47_RS07055 PF00330 Aconitase family (aconitate hydratase) JMW47_RS07060 PF00682 HMGL-like JMW47_RS07065 PF00270 DEAD/DEAH box helicase JMW47_RS07065 PF00271 Helicase conserved C-terminal domain JMW47_RS07085 PF12323 Helix-turn-helix domain JMW47_RS07085 PF01385 Probable transposase JMW47_RS07085 PF07282 Putative transposase DNA-binding domain JMW47_RS07100 PF01645 Conserved region in glutamate synthase JMW47_RS07105 PF01880 Desulfoferrodoxin JMW47_RS07115 PF02915 Rubrerythrin JMW47_RS07130 PF00005 ABC transporter JMW47_RS07135 PF00989 PAS fold JMW47_RS07135 PF16736 Single Cache-like JMW47_RS07135 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS07135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS07140 PF00072 Response regulator receiver domain JMW47_RS07140 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS07145 PF00874 PRD domain JMW47_RS07145 PF03123 CAT RNA binding domain JMW47_RS07150 PF00232 Glycosyl hydrolase family 1 JMW47_RS07155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS07155 PF00367 phosphotransferase system, EIIB JMW47_RS07155 PF02378 Phosphotransferase system, EIIC JMW47_RS07160 PF07690 Major Facilitator Superfamily JMW47_RS07165 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS07165 PF07729 FCD domain JMW47_RS07180 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS07180 PF00563 EAL domain JMW47_RS07180 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS07185 PF12724 Flavodoxin domain JMW47_RS07200 PF13426 PAS domain JMW47_RS07200 PF00158 Sigma-54 interaction domain JMW47_RS07200 PF02954 Bacterial regulatory protein, Fis family JMW47_RS07205 PF00766 Electron transfer flavoprotein FAD-binding domain JMW47_RS07205 PF01012 Electron transfer flavoprotein domain JMW47_RS07205 PF13237 4Fe-4S dicluster domain JMW47_RS07210 PF01012 Electron transfer flavoprotein domain JMW47_RS07215 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JMW47_RS07215 PF02770 Acyl-CoA dehydrogenase, middle domain JMW47_RS07215 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JMW47_RS07220 PF02515 CoA-transferase family III JMW47_RS07230 PF00378 Enoyl-CoA hydratase/isomerase JMW47_RS07235 PF01709 Transcriptional regulator JMW47_RS07240 PF02540 NAD synthase JMW47_RS07245 PF01925 Sulfite exporter TauE/SafE JMW47_RS07255 PF01205 Uncharacterized protein family UPF0029 JMW47_RS07255 PF09186 Domain of unknown function (DUF1949) JMW47_RS07270 PF01926 50S ribosome-binding GTPase JMW47_RS07270 PF16360 GTP-binding GTPase Middle Region JMW47_RS07270 PF13167 GTP-binding GTPase N-terminal JMW47_RS07285 PF00005 ABC transporter JMW47_RS07285 PF12848 ABC transporter JMW47_RS07290 PF08239 Bacterial SH3 domain JMW47_RS07290 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS07295 PF05580 SpoIVB peptidase S55 JMW47_RS07295 PF17820 PDZ domain JMW47_RS07305 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS07305 PF00912 Transglycosylase JMW47_RS07315 PF01546 Peptidase family M20/M25/M40 JMW47_RS07330 PF00356 Bacterial regulatory proteins, lacI family JMW47_RS07340 PF07451 Stage V sporulation protein AD (SpoVAD) JMW47_RS07345 PF03862 SpoVAC/SpoVAEB sporulation membrane protein JMW47_RS07350 PF04545 Sigma-70, region 4 JMW47_RS07350 PF04542 Sigma-70 region 2 JMW47_RS07350 PF04539 Sigma-70 region 3 JMW47_RS07355 PF13581 Histidine kinase-like ATPase domain JMW47_RS07360 PF01740 STAS domain JMW47_RS07365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain JMW47_RS07365 PF00384 Molybdopterin oxidoreductase JMW47_RS07365 PF01568 Molydopterin dinucleotide binding domain JMW47_RS07370 PF00106 short chain dehydrogenase JMW47_RS07375 PF03829 PTS system glucitol/sorbitol-specific IIA component JMW47_RS07385 PF03608 PTS system enzyme II sorbitol-specific factor JMW47_RS07400 PF00271 Helicase conserved C-terminal domain JMW47_RS07400 PF00270 DEAD/DEAH box helicase JMW47_RS07405 PF01699 Sodium/calcium exchanger protein JMW47_RS07410 PF02901 Pyruvate formate lyase-like JMW47_RS07410 PF01228 Glycine radical JMW47_RS07415 PF04055 Radical SAM superfamily JMW47_RS07420 PF00881 Nitroreductase family JMW47_RS07425 PF00114 Pilin (bacterial filament) JMW47_RS07425 PF07963 Prokaryotic N-terminal methylation motif JMW47_RS07430 PF02926 THUMP domain JMW47_RS07430 PF02568 Thiamine biosynthesis protein (ThiI) JMW47_RS07435 PF00266 Aminotransferase class-V JMW47_RS07440 PF00005 ABC transporter JMW47_RS07445 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS07450 PF00497 Bacterial extracellular solute-binding proteins, family 3 JMW47_RS07455 PF13361 UvrD-like helicase C-terminal domain JMW47_RS07455 PF00580 UvrD/REP helicase N-terminal domain JMW47_RS07460 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS07460 PF00563 EAL domain JMW47_RS07460 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS07475 PF00691 OmpA family JMW47_RS07475 PF13677 Membrane MotB of proton-channel complex MotA/MotB JMW47_RS07480 PF01618 MotA/TolQ/ExbB proton channel family JMW47_RS07490 PF00455 DeoR C terminal sensor domain JMW47_RS07490 PF08220 DeoR-like helix-turn-helix domain JMW47_RS07495 PF04346 Ethanolamine utilisation protein, EutH JMW47_RS07500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMW47_RS07500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMW47_RS07505 PF00266 Aminotransferase class-V JMW47_RS07505 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS07520 PF02811 PHP domain JMW47_RS07540 PF03099 Biotin/lipoate A/B protein ligase family JMW47_RS07545 PF06968 Biotin and Thiamin Synthesis associated domain JMW47_RS07545 PF04055 Radical SAM superfamily JMW47_RS07560 PF01597 Glycine cleavage H-protein JMW47_RS07565 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain JMW47_RS07565 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit JMW47_RS07570 PF00809 Pterin binding enzyme JMW47_RS07575 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit JMW47_RS07575 PF04060 Putative Fe-S cluster JMW47_RS07580 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit JMW47_RS07590 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS07590 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMW47_RS07595 PF02574 Homocysteine S-methyltransferase JMW47_RS07595 PF02219 Methylenetetrahydrofolate reductase JMW47_RS07605 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain JMW47_RS07605 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain JMW47_RS07610 PF04961 Formiminotransferase-cyclodeaminase JMW47_RS07615 PF01268 Formate--tetrahydrofolate ligase JMW47_RS07620 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JMW47_RS07625 PF03063 Prismane/CO dehydrogenase family JMW47_RS07630 PF01515 Phosphate acetyl/butaryl transferase JMW47_RS07635 PF14602 Hexapeptide repeat of succinyl-transferase JMW47_RS07635 PF12464 Maltose acetyltransferase JMW47_RS07640 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS07640 PF03466 LysR substrate binding domain JMW47_RS07665 PF00750 tRNA synthetases class I (R) JMW47_RS07665 PF03485 Arginyl tRNA synthetase N terminal domain JMW47_RS07665 PF05746 DALR anticodon binding domain JMW47_RS07670 PF04463 Protein of unknown function (DUF523) JMW47_RS07675 PF00488 MutS domain V JMW47_RS07675 PF01713 Smr domain JMW47_RS07680 PF01546 Peptidase family M20/M25/M40 JMW47_RS07680 PF07687 Peptidase dimerisation domain JMW47_RS07685 PF05230 MASE2 domain JMW47_RS07685 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS07695 PF00293 NUDIX domain JMW47_RS07705 PF01136 Peptidase family U32 JMW47_RS07705 PF12392 Collagenase JMW47_RS07710 PF01385 Probable transposase JMW47_RS07710 PF12323 Helix-turn-helix domain JMW47_RS07710 PF07282 Putative transposase DNA-binding domain JMW47_RS07725 PF03484 tRNA synthetase B5 domain JMW47_RS07725 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JMW47_RS07725 PF01588 Putative tRNA binding domain JMW47_RS07725 PF03147 Ferredoxin-fold anticodon binding domain JMW47_RS07725 PF03483 B3/4 domain JMW47_RS07730 PF01409 tRNA synthetases class II core domain (F) JMW47_RS07730 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain JMW47_RS07735 PF08032 RNA 2'-O ribose methyltransferase substrate binding JMW47_RS07735 PF00588 SpoU rRNA Methylase family JMW47_RS07740 PF02080 TrkA-C domain JMW47_RS07740 PF02254 TrkA-N domain JMW47_RS07745 PF02386 Cation transport protein JMW47_RS07765 PF09278 MerR, DNA binding JMW47_RS07765 PF00376 MerR family regulatory protein JMW47_RS07785 PF12323 Helix-turn-helix domain JMW47_RS07785 PF01385 Probable transposase JMW47_RS07785 PF07282 Putative transposase DNA-binding domain JMW47_RS07810 PF00453 Ribosomal protein L20 JMW47_RS07815 PF01632 Ribosomal protein L35 JMW47_RS07820 PF00707 Translation initiation factor IF-3, C-terminal domain JMW47_RS07820 PF05198 Translation initiation factor IF-3, N-terminal domain JMW47_RS07825 PF01434 Peptidase family M41 JMW47_RS07825 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS07825 PF17862 AAA+ lid domain JMW47_RS07830 PF04542 Sigma-70 region 2 JMW47_RS07830 PF08281 Sigma-70, region 4 JMW47_RS07865 PF07495 Y_Y_Y domain JMW47_RS07865 PF00072 Response regulator receiver domain JMW47_RS07865 PF07494 Two component regulator propeller JMW47_RS07865 PF12833 Helix-turn-helix domain JMW47_RS07865 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS07865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS07870 PF00072 Response regulator receiver domain JMW47_RS07870 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS07875 PF00005 ABC transporter JMW47_RS07915 PF01473 Putative cell wall binding repeat JMW47_RS07915 PF11713 Peptidase C80 family JMW47_RS07915 PF12919 TcdA/TcdB catalytic glycosyltransferase domain JMW47_RS07915 PF12918 TcdB toxin N-terminal helical domain JMW47_RS07915 PF12920 TcdA/TcdB pore forming domain JMW47_RS07930 PF05105 Bacteriophage holin family JMW47_RS07935 PF11713 Peptidase C80 family JMW47_RS07935 PF12920 TcdA/TcdB pore forming domain JMW47_RS07935 PF12919 TcdA/TcdB catalytic glycosyltransferase domain JMW47_RS07935 PF12918 TcdB toxin N-terminal helical domain JMW47_RS07935 PF01473 Putative cell wall binding repeat JMW47_RS07955 PF00654 Voltage gated chloride channel JMW47_RS07970 PF00005 ABC transporter JMW47_RS07975 PF00155 Aminotransferase class I and II JMW47_RS07975 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS07985 PF07676 WD40-like Beta Propeller Repeat JMW47_RS07985 PF00326 Prolyl oligopeptidase family JMW47_RS07990 PF00326 Prolyl oligopeptidase family JMW47_RS07990 PF07676 WD40-like Beta Propeller Repeat JMW47_RS07995 PF07729 FCD domain JMW47_RS07995 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS08000 PF00005 ABC transporter JMW47_RS08055 PF00027 Cyclic nucleotide-binding domain JMW47_RS08055 PF13545 Crp-like helix-turn-helix domain JMW47_RS08070 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMW47_RS08070 PF07497 Rho termination factor, RNA-binding domain JMW47_RS08075 PF00772 DnaB-like helicase N terminal domain JMW47_RS08075 PF03796 DnaB-like helicase C terminal domain JMW47_RS08115 PF13411 MerR HTH family regulatory protein JMW47_RS08115 PF06445 GyrI-like small molecule binding domain JMW47_RS08145 PF00654 Voltage gated chloride channel JMW47_RS08150 PF04229 GrpB protein JMW47_RS08150 PF13673 Acetyltransferase (GNAT) domain JMW47_RS08165 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain JMW47_RS08165 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain JMW47_RS08175 PF05067 Manganese containing catalase JMW47_RS08190 PF02195 ParB-like nuclease domain JMW47_RS08195 PF01507 Phosphoadenosine phosphosulfate reductase family JMW47_RS08195 PF11922 Domain of unknown function (DUF3440) JMW47_RS08215 PF09397 Ftsk gamma domain JMW47_RS08215 PF01580 FtsK/SpoIIIE family JMW47_RS08215 PF17854 FtsK alpha domain JMW47_RS08235 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS08235 PF17151 Periplasmic sensor domain JMW47_RS08240 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS08245 PF00563 EAL domain JMW47_RS08245 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS08245 PF00498 FHA domain JMW47_RS08250 PF00391 PEP-utilising enzyme, mobile domain JMW47_RS08250 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JMW47_RS08255 PF17932 Tetracyclin repressor-like, C-terminal domain JMW47_RS08255 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS08260 PF00171 Aldehyde dehydrogenase family JMW47_RS08290 PF03551 Transcriptional regulator PadR-like family JMW47_RS08300 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMW47_RS08300 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMW47_RS08300 PF02824 TGS domain JMW47_RS08300 PF03129 Anticodon binding domain JMW47_RS08305 PF04286 Protein of unknown function (DUF445) JMW47_RS08305 PF04286 Protein of unknown function (DUF445) JMW47_RS08325 PF07282 Putative transposase DNA-binding domain JMW47_RS08325 PF01385 Probable transposase JMW47_RS08325 PF12323 Helix-turn-helix domain JMW47_RS08335 PF02608 ABC transporter substrate-binding protein PnrA-like JMW47_RS08340 PF02645 Uncharacterised protein, DegV family COG1307 JMW47_RS08345 PF00588 SpoU rRNA Methylase family JMW47_RS08350 PF10576 Iron-sulfur binding domain of endonuclease III JMW47_RS08350 PF00633 Helix-hairpin-helix motif JMW47_RS08350 PF00730 HhH-GPD superfamily base excision DNA repair protein JMW47_RS08355 PF13654 AAA domain JMW47_RS08355 PF05362 Lon protease (S16) C-terminal proteolytic domain JMW47_RS08360 PF08331 Domain of unknown function (DUF1730) JMW47_RS08375 PF01261 Xylose isomerase-like TIM barrel JMW47_RS08385 PF04960 Glutaminase JMW47_RS08390 PF03129 Anticodon binding domain JMW47_RS08390 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain JMW47_RS08390 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMW47_RS08400 PF10502 Signal peptidase, peptidase S26 JMW47_RS08405 PF10502 Signal peptidase, peptidase S26 JMW47_RS08410 PF17126 RsmF rRNA methyltransferase first C-terminal domain JMW47_RS08410 PF01189 16S rRNA methyltransferase RsmB/F JMW47_RS08410 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF JMW47_RS08415 PF13367 PrsW family intramembrane metalloprotease JMW47_RS08435 PF05569 BlaR1 peptidase M56 JMW47_RS08435 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS08440 PF03965 Penicillinase repressor JMW47_RS08455 PF02423 Ornithine cyclodeaminase/mu-crystallin family JMW47_RS08465 PF00072 Response regulator receiver domain JMW47_RS08465 PF01339 CheB methylesterase JMW47_RS08470 PF01739 CheR methyltransferase, SAM binding domain JMW47_RS08470 PF03705 CheR methyltransferase, all-alpha domain JMW47_RS08475 PF01584 CheW-like domain JMW47_RS08480 PF07194 P2 response regulator binding domain JMW47_RS08480 PF02895 Signal transducing histidine kinase, homodimeric domain JMW47_RS08480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS08480 PF01584 CheW-like domain JMW47_RS08480 PF01627 Hpt domain JMW47_RS08485 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain JMW47_RS08485 PF00672 HAMP domain JMW47_RS08485 PF02203 Tar ligand binding domain homologue JMW47_RS08490 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS08490 PF00072 Response regulator receiver domain JMW47_RS08495 PF01584 CheW-like domain JMW47_RS08500 PF03975 CheD chemotactic sensory transduction JMW47_RS08505 PF04509 CheC-like family JMW47_RS08510 PF00072 Response regulator receiver domain JMW47_RS08520 PF08279 HTH domain JMW47_RS08520 PF13280 WYL domain JMW47_RS08540 PF03806 AbgT putative transporter family JMW47_RS08545 PF07687 Peptidase dimerisation domain JMW47_RS08545 PF01546 Peptidase family M20/M25/M40 JMW47_RS08555 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS08555 PF00563 EAL domain JMW47_RS08555 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS08565 PF00072 Response regulator receiver domain JMW47_RS08565 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS08570 PF13493 Domain of unknown function (DUF4118) JMW47_RS08570 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS08570 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS08570 PF02702 Osmosensitive K+ channel His kinase sensor domain JMW47_RS08590 PF00874 PRD domain JMW47_RS08590 PF00158 Sigma-54 interaction domain JMW47_RS08590 PF03610 PTS system fructose IIA component JMW47_RS08595 PF07943 Penicillin-binding protein 5, C-terminal domain JMW47_RS08595 PF00768 D-alanyl-D-alanine carboxypeptidase JMW47_RS08605 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS08605 PF00989 PAS fold JMW47_RS08605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS08605 PF16736 Single Cache-like JMW47_RS08610 PF00072 Response regulator receiver domain JMW47_RS08610 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS08615 PF03613 PTS system mannose/fructose/sorbose family IID component JMW47_RS08625 PF03830 PTS system sorbose subfamily IIB component JMW47_RS08635 PF08240 Alcohol dehydrogenase GroES-like domain JMW47_RS08635 PF00107 Zinc-binding dehydrogenase JMW47_RS08640 PF01259 SAICAR synthetase JMW47_RS08645 PF00893 Small Multidrug Resistance protein JMW47_RS08650 PF00795 Carbon-nitrogen hydrolase JMW47_RS08655 PF00072 Response regulator receiver domain JMW47_RS08655 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS08660 PF16736 Single Cache-like JMW47_RS08660 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS08660 PF00989 PAS fold JMW47_RS08660 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS08665 PF00005 ABC transporter JMW47_RS08670 PF02687 FtsX-like permease family JMW47_RS08670 PF12704 MacB-like periplasmic core domain JMW47_RS08670 PF00005 ABC transporter JMW47_RS08675 PF13426 PAS domain JMW47_RS08675 PF00672 HAMP domain JMW47_RS08675 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS08675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS08680 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS08680 PF00072 Response regulator receiver domain JMW47_RS08695 PF00005 ABC transporter JMW47_RS08710 PF03965 Penicillinase repressor JMW47_RS08715 PF05569 BlaR1 peptidase M56 JMW47_RS08715 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS08720 PF03717 Penicillin-binding Protein dimerisation domain JMW47_RS08720 PF05223 NTF2-like N-terminal transpeptidase domain JMW47_RS08720 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS08800 PF04542 Sigma-70 region 2 JMW47_RS08800 PF08281 Sigma-70, region 4 JMW47_RS08835 PF00082 Subtilase family JMW47_RS08870 PF00005 ABC transporter JMW47_RS08880 PF00753 Metallo-beta-lactamase superfamily JMW47_RS08890 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS08890 PF00072 Response regulator receiver domain JMW47_RS08895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS08895 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS08895 PF00989 PAS fold JMW47_RS08905 PF00005 ABC transporter JMW47_RS08910 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS08915 PF13538 UvrD-like helicase C-terminal domain JMW47_RS08920 PF12833 Helix-turn-helix domain JMW47_RS08925 PF00293 NUDIX domain JMW47_RS08940 PF03553 Na+/H+ antiporter family JMW47_RS08945 PF01168 Alanine racemase, N-terminal domain JMW47_RS08950 PF13941 MutL protein JMW47_RS08955 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase JMW47_RS08955 PF02310 B12 binding domain JMW47_RS08955 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit JMW47_RS08960 PF16552 D-ornithine 4,5-aminomutase alpha-subunit JMW47_RS08965 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS08980 PF02954 Bacterial regulatory protein, Fis family JMW47_RS08980 PF13426 PAS domain JMW47_RS08980 PF00158 Sigma-54 interaction domain JMW47_RS08990 PF01053 Cys/Met metabolism PLP-dependent enzyme JMW47_RS09010 PF05336 L-rhamnose mutarotase JMW47_RS09025 PF00689 Cation transporting ATPase, C-terminus JMW47_RS09025 PF00690 Cation transporter/ATPase, N-terminus JMW47_RS09035 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS09035 PF00072 Response regulator receiver domain JMW47_RS09040 PF00689 Cation transporting ATPase, C-terminus JMW47_RS09040 PF00690 Cation transporter/ATPase, N-terminus JMW47_RS09090 PF05958 tRNA (Uracil-5-)-methyltransferase JMW47_RS09095 PF00849 RNA pseudouridylate synthase JMW47_RS09095 PF01479 S4 domain JMW47_RS09105 PF01116 Fructose-bisphosphate aldolase class-II JMW47_RS09110 PF13188 PAS domain JMW47_RS09110 PF02954 Bacterial regulatory protein, Fis family JMW47_RS09110 PF00158 Sigma-54 interaction domain JMW47_RS09115 PF01012 Electron transfer flavoprotein domain JMW47_RS09115 PF00766 Electron transfer flavoprotein FAD-binding domain JMW47_RS09115 PF13237 4Fe-4S dicluster domain JMW47_RS09120 PF01012 Electron transfer flavoprotein domain JMW47_RS09125 PF02771 Acyl-CoA dehydrogenase, N-terminal domain JMW47_RS09125 PF02770 Acyl-CoA dehydrogenase, middle domain JMW47_RS09125 PF00441 Acyl-CoA dehydrogenase, C-terminal domain JMW47_RS09130 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JMW47_RS09135 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component JMW47_RS09140 PF01869 BadF/BadG/BcrA/BcrD ATPase family JMW47_RS09145 PF02515 CoA-transferase family III JMW47_RS09150 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain JMW47_RS09150 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain JMW47_RS09165 PF13537 Glutamine amidotransferase domain JMW47_RS09165 PF00733 Asparagine synthase JMW47_RS09170 PF03123 CAT RNA binding domain JMW47_RS09170 PF00874 PRD domain JMW47_RS09175 PF00232 Glycosyl hydrolase family 1 JMW47_RS09180 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS09180 PF00367 phosphotransferase system, EIIB JMW47_RS09180 PF02378 Phosphotransferase system, EIIC JMW47_RS09225 PF04607 Region found in RelA / SpoT proteins JMW47_RS09230 PF00753 Metallo-beta-lactamase superfamily JMW47_RS09230 PF16123 Hydroxyacylglutathione hydrolase C-terminus JMW47_RS09260 PF00005 ABC transporter JMW47_RS09270 PF00171 Aldehyde dehydrogenase family JMW47_RS09270 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS09275 PF00571 CBS domain JMW47_RS09275 PF01368 DHH family JMW47_RS09275 PF02833 DHHA2 domain JMW47_RS09275 PF07085 DRTGG domain JMW47_RS09285 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD JMW47_RS09295 PF02127 Aminopeptidase I zinc metalloprotease (M18) JMW47_RS09300 PF00580 UvrD/REP helicase N-terminal domain JMW47_RS09300 PF13361 UvrD-like helicase C-terminal domain JMW47_RS09305 PF00005 ABC transporter JMW47_RS09310 PF02361 Cobalt transport protein JMW47_RS09315 PF02553 Cobalt transport protein component CbiN JMW47_RS09320 PF01891 Cobalt uptake substrate-specific transmembrane region JMW47_RS09335 PF09335 SNARE associated Golgi protein JMW47_RS09355 PF00403 Heavy-metal-associated domain JMW47_RS09360 PF01022 Bacterial regulatory protein, arsR family JMW47_RS09395 PF01546 Peptidase family M20/M25/M40 JMW47_RS09405 PF01546 Peptidase family M20/M25/M40 JMW47_RS09405 PF07687 Peptidase dimerisation domain JMW47_RS09410 PF02653 Branched-chain amino acid transport system / permease component JMW47_RS09415 PF00005 ABC transporter JMW47_RS09420 PF13407 Periplasmic binding protein domain JMW47_RS09425 PF00294 pfkB family carbohydrate kinase JMW47_RS09430 PF00356 Bacterial regulatory proteins, lacI family JMW47_RS09435 PF06968 Biotin and Thiamin Synthesis associated domain JMW47_RS09435 PF04055 Radical SAM superfamily JMW47_RS09455 PF13732 Domain of unknown function (DUF4162) JMW47_RS09455 PF00005 ABC transporter JMW47_RS09460 PF13396 Phospholipase_D-nuclease N-terminal JMW47_RS09475 PF01546 Peptidase family M20/M25/M40 JMW47_RS09485 PF03613 PTS system mannose/fructose/sorbose family IID component JMW47_RS09490 PF03609 PTS system sorbose-specific iic component JMW47_RS09495 PF03830 PTS system sorbose subfamily IIB component JMW47_RS09510 PF00158 Sigma-54 interaction domain JMW47_RS09510 PF00874 PRD domain JMW47_RS09510 PF03610 PTS system fructose IIA component JMW47_RS09515 PF03610 PTS system fructose IIA component JMW47_RS09515 PF00158 Sigma-54 interaction domain JMW47_RS09515 PF00874 PRD domain JMW47_RS09535 PF01638 HxlR-like helix-turn-helix JMW47_RS09545 PF12833 Helix-turn-helix domain JMW47_RS09550 PF04055 Radical SAM superfamily JMW47_RS09555 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS09560 PF00183 Hsp90 protein JMW47_RS09570 PF12323 Helix-turn-helix domain JMW47_RS09570 PF07282 Putative transposase DNA-binding domain JMW47_RS09570 PF01385 Probable transposase JMW47_RS09585 PF07478 D-ala D-ala ligase C-terminus JMW47_RS09585 PF01820 D-ala D-ala ligase N-terminus JMW47_RS09605 PF00535 Glycosyl transferase family 2 JMW47_RS09610 PF00669 Bacterial flagellin N-terminal helical region JMW47_RS09610 PF00700 Bacterial flagellin C-terminal helical region JMW47_RS09620 PF02465 Flagellar hook-associated protein 2 N-terminus JMW47_RS09620 PF07195 Flagellar hook-associated protein 2 C-terminus JMW47_RS09635 PF02599 Global regulator protein family JMW47_RS09640 PF02623 FliW protein JMW47_RS09665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term JMW47_RS09675 PF01464 Transglycosylase SLT domain JMW47_RS09680 PF16363 GDP-mannose 4,6 dehydratase JMW47_RS09685 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase JMW47_RS09690 PF00483 Nucleotidyl transferase JMW47_RS09695 PF04321 RmlD substrate binding domain JMW47_RS09705 PF02142 MGS-like domain JMW47_RS09705 PF01808 AICARFT/IMPCHase bienzyme JMW47_RS09710 PF00551 Formyl transferase JMW47_RS09715 PF00586 AIR synthase related protein, N-terminal domain JMW47_RS09715 PF02769 AIR synthase related protein, C-terminal domain JMW47_RS09720 PF00156 Phosphoribosyl transferase domain JMW47_RS09725 PF01259 SAICAR synthetase JMW47_RS09730 PF00731 AIR carboxylase JMW47_RS09735 PF00881 Nitroreductase family JMW47_RS09750 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS09760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS09780 PF00563 EAL domain JMW47_RS09780 PF00196 Bacterial regulatory proteins, luxR family JMW47_RS09785 PF17760 UvrA interaction domain JMW47_RS09785 PF17755 UvrA DNA-binding domain JMW47_RS09785 PF00005 ABC transporter JMW47_RS09805 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS09815 PF07282 Putative transposase DNA-binding domain JMW47_RS09815 PF01385 Probable transposase JMW47_RS09815 PF12323 Helix-turn-helix domain JMW47_RS09840 PF00958 GMP synthase C terminal domain JMW47_RS09840 PF00117 Glutamine amidotransferase class-I JMW47_RS09840 PF02540 NAD synthase JMW47_RS09845 PF01969 Protein of unknown function DUF111 JMW47_RS09850 PF01969 Protein of unknown function DUF111 JMW47_RS09855 PF00731 AIR carboxylase JMW47_RS09860 PF00118 TCP-1/cpn60 chaperonin family JMW47_RS09865 PF00166 Chaperonin 10 Kd subunit JMW47_RS09870 PF13396 Phospholipase_D-nuclease N-terminal JMW47_RS09870 PF13091 PLD-like domain JMW47_RS09880 PF03601 Conserved hypothetical protein 698 JMW47_RS09885 PF03466 LysR substrate binding domain JMW47_RS09885 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS09890 PF08546 Ketopantoate reductase PanE/ApbA C terminal JMW47_RS09890 PF02558 Ketopantoate reductase PanE/ApbA JMW47_RS09895 PF00156 Phosphoribosyl transferase domain JMW47_RS09900 PF01180 Dihydroorotate dehydrogenase JMW47_RS09905 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JMW47_RS09910 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain JMW47_RS09910 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain JMW47_RS09915 PF00877 NlpC/P60 family JMW47_RS09915 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain JMW47_RS09925 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain JMW47_RS09925 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase JMW47_RS09935 PF01385 Probable transposase JMW47_RS09935 PF12323 Helix-turn-helix domain JMW47_RS09935 PF07282 Putative transposase DNA-binding domain JMW47_RS09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS09965 PF03063 Prismane/CO dehydrogenase family JMW47_RS09975 PF12838 4Fe-4S dicluster domain JMW47_RS09985 PF06971 Putative DNA-binding protein N-terminus JMW47_RS09985 PF02629 CoA binding domain JMW47_RS09990 PF12848 ABC transporter JMW47_RS09990 PF00005 ABC transporter JMW47_RS09990 PF16326 ABC transporter C-terminal domain JMW47_RS09995 PF01554 MatE JMW47_RS10025 PF04055 Radical SAM superfamily JMW47_RS10030 PF18524 High potential iron-sulfur protein like JMW47_RS10030 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal JMW47_RS10035 PF02901 Pyruvate formate lyase-like JMW47_RS10035 PF01228 Glycine radical JMW47_RS10040 PF00814 Glycoprotease family JMW47_RS10045 PF00583 Acetyltransferase (GNAT) family JMW47_RS10050 PF00814 Glycoprotease family JMW47_RS10055 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE JMW47_RS10070 PF01979 Amidohydrolase family JMW47_RS10075 PF16921 Tex protein YqgF-like domain JMW47_RS10075 PF09371 Tex-like protein N-terminal domain JMW47_RS10075 PF00575 S1 RNA binding domain JMW47_RS10075 PF17674 HHH domain JMW47_RS10085 PF01043 SecA preprotein cross-linking domain JMW47_RS10085 PF07517 SecA DEAD-like domain JMW47_RS10085 PF02810 SEC-C motif JMW47_RS10085 PF07516 SecA Wing and Scaffold domain JMW47_RS10090 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JMW47_RS10090 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JMW47_RS10095 PF03932 CutC family JMW47_RS10100 PF01546 Peptidase family M20/M25/M40 JMW47_RS10105 PF01112 Asparaginase JMW47_RS10115 PF02378 Phosphotransferase system, EIIC JMW47_RS10120 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS10125 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMW47_RS10130 PF05043 Mga helix-turn-helix domain JMW47_RS10130 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS10130 PF00874 PRD domain JMW47_RS10130 PF08279 HTH domain JMW47_RS10140 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain JMW47_RS10140 PF14490 Helix-hairpin-helix containing domain JMW47_RS10140 PF13538 UvrD-like helicase C-terminal domain JMW47_RS10150 PF00438 S-adenosylmethionine synthetase, N-terminal domain JMW47_RS10150 PF02772 S-adenosylmethionine synthetase, central domain JMW47_RS10150 PF02773 S-adenosylmethionine synthetase, C-terminal domain JMW47_RS10155 PF06866 Protein of unknown function (DUF1256) JMW47_RS10160 PF07977 FabA-like domain JMW47_RS10170 PF12116 Stage III sporulation protein D JMW47_RS10180 PF08486 Stage II sporulation protein JMW47_RS10185 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) JMW47_RS10195 PF00581 Rhodanese-like domain JMW47_RS10200 PF01380 SIS domain JMW47_RS10205 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMW47_RS10205 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMW47_RS10205 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMW47_RS10205 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMW47_RS10235 PF00871 Acetokinase family JMW47_RS10240 PF01515 Phosphate acetyl/butaryl transferase JMW47_RS10250 PF02457 DisA bacterial checkpoint controller nucleotide-binding JMW47_RS10350 PF04055 Radical SAM superfamily JMW47_RS10355 PF13597 Anaerobic ribonucleoside-triphosphate reductase JMW47_RS10355 PF03477 ATP cone domain JMW47_RS10360 PF00155 Aminotransferase class I and II JMW47_RS10495 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS10500 PF00380 Ribosomal protein S9/S16 JMW47_RS10505 PF00572 Ribosomal protein L13 JMW47_RS10510 PF01416 tRNA pseudouridine synthase JMW47_RS10515 PF02361 Cobalt transport protein JMW47_RS10520 PF00005 ABC transporter JMW47_RS10525 PF00005 ABC transporter JMW47_RS10530 PF01196 Ribosomal protein L17 JMW47_RS10535 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain JMW47_RS10535 PF01000 RNA polymerase Rpb3/RpoA insert domain JMW47_RS10535 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain JMW47_RS10540 PF01479 S4 domain JMW47_RS10540 PF00163 Ribosomal protein S4/S9 N-terminal domain JMW47_RS10545 PF00411 Ribosomal protein S11 JMW47_RS10550 PF00416 Ribosomal protein S13/S18 JMW47_RS10555 PF00444 Ribosomal protein L36 JMW47_RS10560 PF01176 Translation initiation factor 1A / IF-1 JMW47_RS10570 PF00557 Metallopeptidase family M24 JMW47_RS10575 PF05191 Adenylate kinase, active site lid JMW47_RS10580 PF00344 SecY translocase JMW47_RS10585 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A JMW47_RS10590 PF00327 Ribosomal protein L30p/L7e JMW47_RS10595 PF03719 Ribosomal protein S5, C-terminal domain JMW47_RS10595 PF00333 Ribosomal protein S5, N-terminal domain JMW47_RS10600 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast JMW47_RS10605 PF00347 Ribosomal protein L6 JMW47_RS10610 PF00410 Ribosomal protein S8 JMW47_RS10615 PF00253 Ribosomal protein S14p/S29e JMW47_RS10620 PF00673 ribosomal L5P family C-terminus JMW47_RS10620 PF00281 Ribosomal protein L5 JMW47_RS10625 PF00467 KOW motif JMW47_RS10625 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 JMW47_RS10630 PF00238 Ribosomal protein L14p/L23e JMW47_RS10635 PF00366 Ribosomal protein S17 JMW47_RS10640 PF00831 Ribosomal L29 protein JMW47_RS10645 PF00252 Ribosomal protein L16p/L10e JMW47_RS10650 PF07650 KH domain JMW47_RS10650 PF00189 Ribosomal protein S3, C-terminal domain JMW47_RS10655 PF00237 Ribosomal protein L22p/L17e JMW47_RS10660 PF00203 Ribosomal protein S19 JMW47_RS10665 PF00181 Ribosomal Proteins L2, RNA binding domain JMW47_RS10665 PF03947 Ribosomal Proteins L2, C-terminal domain JMW47_RS10670 PF00276 Ribosomal protein L23 JMW47_RS10675 PF00573 Ribosomal protein L4/L1 family JMW47_RS10680 PF00297 Ribosomal protein L3 JMW47_RS10685 PF00338 Ribosomal protein S10p/S20e JMW47_RS10690 PF03143 Elongation factor Tu C-terminal domain JMW47_RS10690 PF03144 Elongation factor Tu domain 2 JMW47_RS10690 PF00009 Elongation factor Tu GTP binding domain JMW47_RS10695 PF03764 Elongation factor G, domain IV JMW47_RS10695 PF00009 Elongation factor Tu GTP binding domain JMW47_RS10695 PF03144 Elongation factor Tu domain 2 JMW47_RS10695 PF14492 Elongation Factor G, domain II JMW47_RS10695 PF00679 Elongation factor G C-terminus JMW47_RS10700 PF00177 Ribosomal protein S7p/S5e JMW47_RS10705 PF00164 Ribosomal protein S12/S23 JMW47_RS10710 PF04983 RNA polymerase Rpb1, domain 3 JMW47_RS10710 PF00623 RNA polymerase Rpb1, domain 2 JMW47_RS10710 PF04997 RNA polymerase Rpb1, domain 1 JMW47_RS10710 PF04998 RNA polymerase Rpb1, domain 5 JMW47_RS10710 PF05000 RNA polymerase Rpb1, domain 4 JMW47_RS10715 PF10385 RNA polymerase beta subunit external 1 domain JMW47_RS10715 PF04565 RNA polymerase Rpb2, domain 3 JMW47_RS10715 PF04561 RNA polymerase Rpb2, domain 2 JMW47_RS10715 PF04560 RNA polymerase Rpb2, domain 7 JMW47_RS10715 PF00562 RNA polymerase Rpb2, domain 6 JMW47_RS10715 PF04563 RNA polymerase beta subunit JMW47_RS10725 PF16320 Ribosomal protein L7/L12 dimerisation domain JMW47_RS10725 PF00542 Ribosomal protein L7/L12 C-terminal domain JMW47_RS10730 PF00466 Ribosomal protein L10 JMW47_RS10735 PF00687 Ribosomal protein L1p/L10e family JMW47_RS10740 PF03946 Ribosomal protein L11, N-terminal domain JMW47_RS10740 PF00298 Ribosomal protein L11, RNA binding domain JMW47_RS10745 PF02357 Transcription termination factor nusG JMW47_RS10745 PF00467 KOW motif JMW47_RS10755 PF00471 Ribosomal protein L33 JMW47_RS10760 PF03143 Elongation factor Tu C-terminal domain JMW47_RS10760 PF03144 Elongation factor Tu domain 2 JMW47_RS10760 PF00009 Elongation factor Tu GTP binding domain JMW47_RS10765 PF08281 Sigma-70, region 4 JMW47_RS10765 PF04542 Sigma-70 region 2 JMW47_RS10770 PF05991 YacP-like NYN domain JMW47_RS10775 PF08032 RNA 2'-O ribose methyltransferase substrate binding JMW47_RS10775 PF00588 SpoU rRNA Methylase family JMW47_RS10780 PF02511 Thymidylate synthase complementing protein JMW47_RS10785 PF00636 Ribonuclease III domain JMW47_RS10790 PF09190 DALR domain JMW47_RS10790 PF01406 tRNA synthetases class I (C) catalytic domain JMW47_RS10800 PF00749 tRNA synthetases class I (E and Q), catalytic domain JMW47_RS10805 PF03129 Anticodon binding domain JMW47_RS10805 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMW47_RS10805 PF09180 Prolyl-tRNA synthetase, C-terminal JMW47_RS10810 PF03129 Anticodon binding domain JMW47_RS10810 PF04073 Aminoacyl-tRNA editing domain JMW47_RS10810 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMW47_RS10815 PF02542 YgbB family JMW47_RS10820 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase JMW47_RS10825 PF10437 Bacterial lipoate protein ligase C-terminus JMW47_RS10825 PF03099 Biotin/lipoate A/B protein ligase family JMW47_RS10830 PF00596 Class II Aldolase and Adducin N-terminal domain JMW47_RS10840 PF03611 PTS system sugar-specific permease component JMW47_RS10845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS10855 PF00158 Sigma-54 interaction domain JMW47_RS10855 PF03610 PTS system fructose IIA component JMW47_RS10855 PF00874 PRD domain JMW47_RS10860 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS10860 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMW47_RS10865 PF00364 Biotin-requiring enzyme JMW47_RS10865 PF02817 e3 binding domain JMW47_RS10865 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) JMW47_RS10870 PF02779 Transketolase, pyrimidine binding domain JMW47_RS10870 PF02780 Transketolase, C-terminal domain JMW47_RS10875 PF00676 Dehydrogenase E1 component JMW47_RS10880 PF04198 Putative sugar-binding domain JMW47_RS10890 PF00072 Response regulator receiver domain JMW47_RS10890 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS10895 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS10895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS10905 PF04616 Glycosyl hydrolases family 43 JMW47_RS10905 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain JMW47_RS10930 PF10635 DisA bacterial checkpoint controller linker region JMW47_RS10930 PF02457 DisA bacterial checkpoint controller nucleotide-binding JMW47_RS10935 PF18073 Rubredoxin metal binding domain JMW47_RS10940 PF10431 C-terminal, D2-small domain, of ClpB protein JMW47_RS10940 PF02861 Clp amino terminal domain, pathogenicity island component JMW47_RS10940 PF17871 AAA lid domain JMW47_RS10940 PF07724 AAA domain (Cdc48 subfamily) JMW47_RS10940 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS10945 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain JMW47_RS10950 PF02151 UvrB/uvrC motif JMW47_RS10955 PF05848 CtsR N-terminal HTH domain JMW47_RS10955 PF17727 CtsR C-terminal dimerization domain JMW47_RS10960 PF00009 Elongation factor Tu GTP binding domain JMW47_RS10960 PF03144 Elongation factor Tu domain 2 JMW47_RS10960 PF03764 Elongation factor G, domain IV JMW47_RS10960 PF14492 Elongation Factor G, domain II JMW47_RS10960 PF00679 Elongation factor G C-terminus JMW47_RS10965 PF00682 HMGL-like JMW47_RS10965 PF00364 Biotin-requiring enzyme JMW47_RS10965 PF00289 Biotin carboxylase, N-terminal domain JMW47_RS10965 PF02785 Biotin carboxylase C-terminal domain JMW47_RS10965 PF02436 Conserved carboxylase domain JMW47_RS10965 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMW47_RS11205 PF00534 Glycosyl transferases group 1 JMW47_RS11205 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JMW47_RS11215 PF13662 Toprim domain JMW47_RS11215 PF02132 RecR protein JMW47_RS11220 PF02575 YbaB/EbfC DNA-binding family JMW47_RS11225 PF12169 DNA polymerase III subunits gamma and tau domain III JMW47_RS11240 PF14437 MafB19-like deaminase JMW47_RS11245 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMW47_RS11245 PF02403 Seryl-tRNA synthetase N-terminal domain JMW47_RS11250 PF00924 Mechanosensitive ion channel JMW47_RS11250 PF05552 Conserved TM helix JMW47_RS11255 PF02829 3H domain JMW47_RS11255 PF08279 HTH domain JMW47_RS11305 PF04539 Sigma-70 region 3 JMW47_RS11305 PF04542 Sigma-70 region 2 JMW47_RS11305 PF04545 Sigma-70, region 4 JMW47_RS11310 PF13581 Histidine kinase-like ATPase domain JMW47_RS11315 PF01740 STAS domain JMW47_RS11330 PF00521 DNA gyrase/topoisomerase IV, subunit A JMW47_RS11330 PF03989 DNA gyrase C-terminal domain, beta-propeller JMW47_RS11335 PF01751 Toprim domain JMW47_RS11335 PF00204 DNA gyrase B JMW47_RS11335 PF00986 DNA gyrase B subunit, carboxyl terminus JMW47_RS11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS11340 PF02463 RecF/RecN/SMC N terminal domain JMW47_RS11350 PF00712 DNA polymerase III beta subunit, N-terminal domain JMW47_RS11350 PF02767 DNA polymerase III beta subunit, central domain JMW47_RS11350 PF02768 DNA polymerase III beta subunit, C-terminal domain JMW47_RS11355 PF08299 Bacterial dnaA protein helix-turn-helix JMW47_RS11355 PF00308 Bacterial dnaA protein JMW47_RS11355 PF11638 DnaA N-terminal domain JMW47_RS11360 PF00468 Ribosomal protein L34 JMW47_RS11365 PF00825 Ribonuclease P JMW47_RS11370 PF01809 Putative membrane protein insertion efficiency factor JMW47_RS11375 PF02096 60Kd inner membrane protein JMW47_RS11380 PF14804 Jag N-terminus JMW47_RS11380 PF01424 R3H domain JMW47_RS11385 PF01926 50S ribosome-binding GTPase JMW47_RS11385 PF10396 GTP-binding protein TrmE N-terminus JMW47_RS11385 PF12631 MnmE helical domain JMW47_RS11390 PF13932 GidA associated domain JMW47_RS11390 PF01134 Glucose inhibited division protein A JMW47_RS11395 PF02527 rRNA small subunit methyltransferase G JMW47_RS11400 PF17762 HTH domain found in ParB protein JMW47_RS11400 PF02195 ParB-like nuclease domain JMW47_RS11405 PF13614 AAA domain JMW47_RS11410 PF02195 ParB-like nuclease domain JMW47_RS11410 PF17762 HTH domain found in ParB protein JMW47_RS11415 PF00266 Aminotransferase class-V JMW47_RS11430 PF01206 Sulfurtransferase TusA JMW47_RS11445 PF00155 Aminotransferase class I and II JMW47_RS11450 PF01250 Ribosomal protein S6 JMW47_RS11455 PF00436 Single-strand binding protein family JMW47_RS11460 PF01084 Ribosomal protein S18 JMW47_RS11475 PF01368 DHH family JMW47_RS11475 PF02272 DHHA1 domain JMW47_RS11480 PF01281 Ribosomal protein L9, N-terminal domain JMW47_RS11480 PF03948 Ribosomal protein L9, C-terminal domain JMW47_RS11485 PF03796 DnaB-like helicase C terminal domain JMW47_RS11485 PF00772 DnaB-like helicase N terminal domain JMW47_RS11495 PF00709 Adenylosuccinate synthetase JMW47_RS11520 PF01695 IstB-like ATP binding protein JMW47_RS11535 PF00753 Metallo-beta-lactamase superfamily JMW47_RS11540 PF02378 Phosphotransferase system, EIIC JMW47_RS11545 PF02590 Predicted SPOUT methyltransferase JMW47_RS11550 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS11555 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMW47_RS11560 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS11560 PF07702 UTRA domain JMW47_RS11565 PF02378 Phosphotransferase system, EIIC JMW47_RS11575 PF01979 Amidohydrolase family JMW47_RS11580 PF03841 L-seryl-tRNA selenium transferase JMW47_RS11585 PF07071 KDGP aldolase JMW47_RS11590 PF00294 pfkB family carbohydrate kinase JMW47_RS11595 PF03466 LysR substrate binding domain JMW47_RS11595 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS11625 PF00857 Isochorismatase family JMW47_RS11635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS11645 PF01380 SIS domain JMW47_RS11645 PF00571 CBS domain JMW47_RS11650 PF00701 Dihydrodipicolinate synthetase family JMW47_RS11655 PF02581 Thiamine monophosphate synthase JMW47_RS11665 PF07687 Peptidase dimerisation domain JMW47_RS11665 PF01546 Peptidase family M20/M25/M40 JMW47_RS11670 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS11675 PF05231 MASE1 JMW47_RS11675 PF13426 PAS domain JMW47_RS11675 PF00563 EAL domain JMW47_RS11675 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS11675 PF08447 PAS fold JMW47_RS11675 PF08448 PAS fold JMW47_RS11685 PF02687 FtsX-like permease family JMW47_RS11685 PF00005 ABC transporter JMW47_RS11685 PF12704 MacB-like periplasmic core domain JMW47_RS11690 PF08274 PhnA Zinc-Ribbon JMW47_RS11690 PF03831 PhnA domain JMW47_RS11695 PF00805 Pentapeptide repeats (8 copies) JMW47_RS11705 PF13302 Acetyltransferase (GNAT) domain JMW47_RS11705 PF03352 Methyladenine glycosylase JMW47_RS11705 PF00958 GMP synthase C terminal domain JMW47_RS11705 PF13673 Acetyltransferase (GNAT) domain JMW47_RS11705 PF00117 Glutamine amidotransferase class-I JMW47_RS11715 PF10026 Predicted Zn-dependent protease (DUF2268) JMW47_RS11720 PF00999 Sodium/hydrogen exchanger family JMW47_RS11720 PF02080 TrkA-C domain JMW47_RS11720 PF03471 Transporter associated domain JMW47_RS11725 PF06445 GyrI-like small molecule binding domain JMW47_RS11725 PF13411 MerR HTH family regulatory protein JMW47_RS11740 PF01554 MatE JMW47_RS11745 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily JMW47_RS11755 PF00005 ABC transporter JMW47_RS11755 PF12857 TOBE-like domain JMW47_RS11765 PF01979 Amidohydrolase family JMW47_RS11775 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS11780 PF01370 NAD dependent epimerase/dehydratase family JMW47_RS11785 PF00149 Calcineurin-like phosphoesterase JMW47_RS11785 PF10518 TAT (twin-arginine translocation) pathway signal sequence JMW47_RS11790 PF01171 PP-loop family JMW47_RS11795 PF02557 D-alanyl-D-alanine carboxypeptidase JMW47_RS11800 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS11800 PF00072 Response regulator receiver domain JMW47_RS11805 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS11805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS11810 PF02664 S-Ribosylhomocysteinase (LuxS) JMW47_RS11820 PF02310 B12 binding domain JMW47_RS11820 PF02965 Vitamin B12 dependent methionine synthase, activation domain JMW47_RS11820 PF00809 Pterin binding enzyme JMW47_RS11820 PF02574 Homocysteine S-methyltransferase JMW47_RS11820 PF02607 B12 binding domain JMW47_RS11825 PF02073 Thermophilic metalloprotease (M29) JMW47_RS11840 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family JMW47_RS11845 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JMW47_RS11845 PF00117 Glutamine amidotransferase class-I JMW47_RS11850 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JMW47_RS11850 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMW47_RS11850 PF02142 MGS-like domain JMW47_RS11855 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain JMW47_RS11855 PF00117 Glutamine amidotransferase class-I JMW47_RS11860 PF02142 MGS-like domain JMW47_RS11860 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain JMW47_RS11860 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain JMW47_RS11875 PF03551 Transcriptional regulator PadR-like family JMW47_RS11885 PF00072 Response regulator receiver domain JMW47_RS11885 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS11890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS11890 PF00672 HAMP domain JMW47_RS11890 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS11895 PF00005 ABC transporter JMW47_RS11895 PF02687 FtsX-like permease family JMW47_RS11895 PF12704 MacB-like periplasmic core domain JMW47_RS11905 PF06445 GyrI-like small molecule binding domain JMW47_RS11905 PF13411 MerR HTH family regulatory protein JMW47_RS11910 PF00849 RNA pseudouridylate synthase JMW47_RS11910 PF01479 S4 domain JMW47_RS11915 PF10672 S-adenosylmethionine-dependent methyltransferase JMW47_RS11930 PF00239 Resolvase, N terminal domain JMW47_RS11930 PF02796 Helix-turn-helix domain of resolvase JMW47_RS11935 PF01053 Cys/Met metabolism PLP-dependent enzyme JMW47_RS11940 PF07690 Major Facilitator Superfamily JMW47_RS11965 PF02810 SEC-C motif JMW47_RS11965 PF07516 SecA Wing and Scaffold domain JMW47_RS11965 PF01043 SecA preprotein cross-linking domain JMW47_RS11965 PF07517 SecA DEAD-like domain JMW47_RS11980 PF05582 YabG peptidase U57 JMW47_RS11995 PF08544 GHMP kinases C terminal JMW47_RS11995 PF00288 GHMP kinases N terminal domain JMW47_RS12000 PF07729 FCD domain JMW47_RS12000 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS12005 PF09551 Stage II sporulation protein R (spore_II_R) JMW47_RS12010 PF01471 Putative peptidoglycan binding domain JMW47_RS12010 PF07486 Cell Wall Hydrolase JMW47_RS12015 PF01177 Asp/Glu/Hydantoin racemase JMW47_RS12025 PF01171 PP-loop family JMW47_RS12025 PF11734 TilS substrate C-terminal domain JMW47_RS12030 PF01434 Peptidase family M41 JMW47_RS12030 PF17862 AAA+ lid domain JMW47_RS12030 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS12035 PF08279 HTH domain JMW47_RS12035 PF02237 Biotin protein ligase C terminal domain JMW47_RS12035 PF03099 Biotin/lipoate A/B protein ligase family JMW47_RS12040 PF03576 Peptidase family S58 JMW47_RS12050 PF03309 Type III pantothenate kinase JMW47_RS12055 PF01207 Dihydrouridine synthase (Dus) JMW47_RS12060 PF03449 Transcription elongation factor, N-terminal JMW47_RS12060 PF01272 Transcription elongation factor, GreA/GreB, C-term JMW47_RS12065 PF00152 tRNA synthetases class II (D, K and N) JMW47_RS12065 PF01336 OB-fold nucleic acid binding domain JMW47_RS12090 PF04070 Domain of unknown function (DUF378) JMW47_RS12095 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain JMW47_RS12095 PF01276 Orn/Lys/Arg decarboxylase, major domain JMW47_RS12105 PF09115 DNA polymerase III, delta subunit, C terminal JMW47_RS12110 PF04468 PSP1 C-terminal conserved region JMW47_RS12115 PF05175 Methyltransferase small domain JMW47_RS12120 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12125 PF12627 Probable RNA and SrmB- binding site of polymerase A JMW47_RS12125 PF01966 HD domain JMW47_RS12125 PF01743 Poly A polymerase head domain JMW47_RS12130 PF01037 Lrp/AsnC ligand binding domain JMW47_RS12135 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain JMW47_RS12135 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain JMW47_RS12135 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family JMW47_RS12145 PF07670 Nucleoside recognition JMW47_RS12150 PF01588 Putative tRNA binding domain JMW47_RS12150 PF09334 tRNA synthetases class I (M) JMW47_RS12150 PF08264 Anticodon-binding domain of tRNA JMW47_RS12155 PF01026 TatD related DNase JMW47_RS12165 PF02811 PHP domain JMW47_RS12170 PF00005 ABC transporter JMW47_RS12175 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS12185 PF13331 Domain of unknown function (DUF4093) JMW47_RS12185 PF01751 Toprim domain JMW47_RS12190 PF00398 Ribosomal RNA adenine dimethylase JMW47_RS12200 PF01546 Peptidase family M20/M25/M40 JMW47_RS12200 PF07687 Peptidase dimerisation domain JMW47_RS12205 PF16916 Dimerisation domain of Zinc Transporter JMW47_RS12205 PF01545 Cation efflux family JMW47_RS12215 PF02875 Mur ligase family, glutamate ligase domain JMW47_RS12215 PF01225 Mur ligase family, catalytic domain JMW47_RS12215 PF08245 Mur ligase middle domain JMW47_RS12220 PF00156 Phosphoribosyl transferase domain JMW47_RS12220 PF09182 Bacterial purine repressor, N-terminal JMW47_RS12225 PF04026 SpoVG JMW47_RS12230 PF00483 Nucleotidyl transferase JMW47_RS12230 PF14602 Hexapeptide repeat of succinyl-transferase JMW47_RS12230 PF00132 Bacterial transferase hexapeptide (six repeats) JMW47_RS12235 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase JMW47_RS12235 PF14572 Phosphoribosyl synthetase-associated domain JMW47_RS12245 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JMW47_RS12245 PF00437 Type II/IV secretion system protein JMW47_RS12250 PF00482 Type II secretion system (T2SS), protein F JMW47_RS12280 PF00437 Type II/IV secretion system protein JMW47_RS12285 PF06750 Bacterial Peptidase A24 N-terminal domain JMW47_RS12285 PF01478 Type IV leader peptidase family JMW47_RS12295 PF01195 Peptidyl-tRNA hydrolase JMW47_RS12300 PF03461 TRCF domain JMW47_RS12300 PF00271 Helicase conserved C-terminal domain JMW47_RS12300 PF02559 CarD-like/TRCF domain JMW47_RS12300 PF00270 DEAD/DEAH box helicase JMW47_RS12300 PF17757 UvrB interaction domain JMW47_RS12310 PF15714 Stage V sporulation protein T C-terminal, transcription factor JMW47_RS12310 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin JMW47_RS12315 PF14667 Polysaccharide biosynthesis C-terminal domain JMW47_RS12315 PF01943 Polysaccharide biosynthesis protein JMW47_RS12320 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12320 PF03819 MazG nucleotide pyrophosphohydrolase domain JMW47_RS12325 PF00216 Bacterial DNA-binding protein JMW47_RS12330 PF01479 S4 domain JMW47_RS12350 PF02541 Ppx/GppA phosphatase family JMW47_RS12355 PF07228 Stage II sporulation protein E (SpoIIE) JMW47_RS12360 PF08439 Oligopeptidase F JMW47_RS12360 PF01432 Peptidase family M3 JMW47_RS12365 PF00483 Nucleotidyl transferase JMW47_RS12370 PF07497 Rho termination factor, RNA-binding domain JMW47_RS12370 PF07498 Rho termination factor, N-terminal domain JMW47_RS12370 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMW47_RS12375 PF01197 Ribosomal protein L31 JMW47_RS12380 PF07136 Protein of unknown function (DUF1385) JMW47_RS12385 PF17827 PrmC N-terminal domain JMW47_RS12385 PF05175 Methyltransferase small domain JMW47_RS12390 PF03462 PCRF domain JMW47_RS12390 PF00472 RF-1 domain JMW47_RS12400 PF01300 Telomere recombination JMW47_RS12400 PF03481 Putative GTP-binding controlling metal-binding JMW47_RS12405 PF01451 Low molecular weight phosphotyrosine protein phosphatase JMW47_RS12410 PF02502 Ribose/Galactose Isomerase JMW47_RS12420 PF13478 XdhC Rossmann domain JMW47_RS12420 PF02625 XdhC and CoxI family JMW47_RS12440 PF00119 ATP synthase A chain JMW47_RS12445 PF00137 ATP synthase subunit C JMW47_RS12450 PF00430 ATP synthase B/B' CF(0) JMW47_RS12455 PF00213 ATP synthase delta (OSCP) subunit JMW47_RS12460 PF00306 ATP synthase alpha/beta chain, C terminal domain JMW47_RS12460 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMW47_RS12460 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMW47_RS12465 PF00231 ATP synthase JMW47_RS12470 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMW47_RS12470 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMW47_RS12475 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain JMW47_RS12475 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain JMW47_RS12480 PF01648 4'-phosphopantetheinyl transferase superfamily JMW47_RS12485 PF00571 CBS domain JMW47_RS12485 PF00478 IMP dehydrogenase / GMP reductase domain JMW47_RS12495 PF01168 Alanine racemase, N-terminal domain JMW47_RS12495 PF00842 Alanine racemase, C-terminal domain JMW47_RS12505 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system JMW47_RS12510 PF00456 Transketolase, thiamine diphosphate binding domain JMW47_RS12515 PF02779 Transketolase, pyrimidine binding domain JMW47_RS12515 PF02780 Transketolase, C-terminal domain JMW47_RS12530 PF01812 5-formyltetrahydrofolate cyclo-ligase family JMW47_RS12535 PF03572 Peptidase family S41 JMW47_RS12535 PF17820 PDZ domain JMW47_RS12535 PF01471 Putative peptidoglycan binding domain JMW47_RS12540 PF01979 Amidohydrolase family JMW47_RS12545 PF07702 UTRA domain JMW47_RS12545 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS12550 PF00294 pfkB family carbohydrate kinase JMW47_RS12555 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMW47_RS12560 PF01380 SIS domain JMW47_RS12565 PF01116 Fructose-bisphosphate aldolase class-II JMW47_RS12570 PF03123 CAT RNA binding domain JMW47_RS12570 PF00874 PRD domain JMW47_RS12575 PF05343 M42 glutamyl aminopeptidase JMW47_RS12580 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMW47_RS12585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS12590 PF02378 Phosphotransferase system, EIIC JMW47_RS12590 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS12595 PF00557 Metallopeptidase family M24 JMW47_RS12595 PF01321 Creatinase/Prolidase N-terminal domain JMW47_RS12600 PF00155 Aminotransferase class I and II JMW47_RS12615 PF02277 Phosphoribosyltransferase JMW47_RS12620 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase JMW47_RS12625 PF02654 Cobalamin-5-phosphate synthase JMW47_RS12635 PF07685 CobB/CobQ-like glutamine amidotransferase domain JMW47_RS12640 PF07685 CobB/CobQ-like glutamine amidotransferase domain JMW47_RS12640 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain JMW47_RS12645 PF03186 CobD/Cbib protein JMW47_RS12650 PF00155 Aminotransferase class I and II JMW47_RS12655 PF00288 GHMP kinases N terminal domain JMW47_RS12660 PF02570 Precorrin-8X methylmutase JMW47_RS12665 PF01888 CbiD JMW47_RS12670 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12675 PF05175 Methyltransferase small domain JMW47_RS12680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12685 PF01890 Cobalamin synthesis G C-terminus JMW47_RS12685 PF11760 Cobalamin synthesis G N-terminal JMW47_RS12685 PF11761 Cobalamin biosynthesis central region JMW47_RS12690 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12695 PF02571 Precorrin-6x reductase CbiJ/CobK JMW47_RS12700 PF06180 Cobalt chelatase (CbiK) JMW47_RS12705 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain JMW47_RS12705 PF03900 Porphobilinogen deaminase, C-terminal domain JMW47_RS12710 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12710 PF02602 Uroporphyrinogen-III synthase HemD JMW47_RS12715 PF00490 Delta-aminolevulinic acid dehydratase JMW47_RS12720 PF14824 Sirohaem biosynthesis protein central JMW47_RS12720 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases JMW47_RS12720 PF10414 Sirohaem synthase dimerisation region JMW47_RS12740 PF17912 MalK OB fold domain JMW47_RS12740 PF00005 ABC transporter JMW47_RS12740 PF03459 TOBE domain JMW47_RS12745 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS12750 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS12755 PF13416 Bacterial extracellular solute-binding protein JMW47_RS12765 PF00271 Helicase conserved C-terminal domain JMW47_RS12765 PF12344 Ultra-violet resistance protein B JMW47_RS12765 PF17757 UvrB interaction domain JMW47_RS12765 PF04851 Type III restriction enzyme, res subunit JMW47_RS12765 PF02151 UvrB/uvrC motif JMW47_RS12770 PF17755 UvrA DNA-binding domain JMW47_RS12770 PF17760 UvrA interaction domain JMW47_RS12775 PF08459 UvrC Helix-hairpin-helix N-terminal JMW47_RS12775 PF01541 GIY-YIG catalytic domain JMW47_RS12775 PF12826 Helix-hairpin-helix motif JMW47_RS12775 PF02151 UvrB/uvrC motif JMW47_RS12780 PF02603 HPr Serine kinase N terminus JMW47_RS12780 PF07475 HPr Serine kinase C-terminal domain JMW47_RS12785 PF05192 MutS domain III JMW47_RS12785 PF05190 MutS family domain IV JMW47_RS12785 PF01624 MutS domain I JMW47_RS12785 PF00488 MutS domain V JMW47_RS12785 PF05188 MutS domain II JMW47_RS12790 PF02906 Iron only hydrogenase large subunit, C-terminal domain JMW47_RS12790 PF02256 Iron hydrogenase small subunit JMW47_RS12790 PF00037 4Fe-4S binding domain JMW47_RS12790 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JMW47_RS12795 PF00037 4Fe-4S binding domain JMW47_RS12795 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region JMW47_RS12795 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JMW47_RS12805 PF13396 Phospholipase_D-nuclease N-terminal JMW47_RS12805 PF13091 PLD-like domain JMW47_RS12810 PF01226 Formate/nitrite transporter JMW47_RS12815 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain JMW47_RS12815 PF01565 FAD binding domain JMW47_RS12820 PF02811 PHP domain JMW47_RS12825 PF03668 P-loop ATPase protein family JMW47_RS12830 PF01933 Uncharacterised protein family UPF0052 JMW47_RS12835 PF00293 NUDIX domain JMW47_RS12840 PF02650 WhiA C-terminal HTH domain JMW47_RS12840 PF14527 WhiA LAGLIDADG-like domain JMW47_RS12840 PF10298 WhiA N-terminal LAGLIDADG-like domain JMW47_RS12845 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMW47_RS12845 PF14579 Helix-hairpin-helix motif JMW47_RS12845 PF02811 PHP domain JMW47_RS12845 PF01336 OB-fold nucleic acid binding domain JMW47_RS12845 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMW47_RS12850 PF00365 Phosphofructokinase JMW47_RS12855 PF00224 Pyruvate kinase, barrel domain JMW47_RS12855 PF02887 Pyruvate kinase, alpha/beta domain JMW47_RS12855 PF00391 PEP-utilising enzyme, mobile domain JMW47_RS12860 PF05958 tRNA (Uracil-5-)-methyltransferase JMW47_RS12860 PF01938 TRAM domain JMW47_RS12885 PF03193 RsgA GTPase JMW47_RS12895 PF17156 Gammaproteobacterial periplasmic sensor domain JMW47_RS12895 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS12900 PF00005 ABC transporter JMW47_RS12920 PF00072 Response regulator receiver domain JMW47_RS12920 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS12925 PF12848 ABC transporter JMW47_RS12925 PF00005 ABC transporter JMW47_RS12940 PF01638 HxlR-like helix-turn-helix JMW47_RS12945 PF00881 Nitroreductase family JMW47_RS12955 PF00155 Aminotransferase class I and II JMW47_RS12955 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS12960 PF12833 Helix-turn-helix domain JMW47_RS12965 PF00574 Clp protease JMW47_RS12970 PF00535 Glycosyl transferase family 2 JMW47_RS12970 PF13181 Tetratricopeptide repeat JMW47_RS12995 PF07282 Putative transposase DNA-binding domain JMW47_RS12995 PF01385 Probable transposase JMW47_RS12995 PF12323 Helix-turn-helix domain JMW47_RS13005 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS13005 PF00072 Response regulator receiver domain JMW47_RS13020 PF02634 FdhD/NarQ family JMW47_RS13025 PF13247 4Fe-4S dicluster domain JMW47_RS13025 PF12800 4Fe-4S binding domain JMW47_RS13030 PF00037 4Fe-4S binding domain JMW47_RS13030 PF02256 Iron hydrogenase small subunit JMW47_RS13030 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region JMW47_RS13030 PF02906 Iron only hydrogenase large subunit, C-terminal domain JMW47_RS13035 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS13035 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster JMW47_RS13035 PF13247 4Fe-4S dicluster domain JMW47_RS13045 PF02899 Phage integrase, N-terminal SAM-like domain JMW47_RS13045 PF00589 Phage integrase family JMW47_RS13055 PF18106 Rolling Circle replication initiation protein N-terminal domain JMW47_RS13055 PF02486 Replication initiation factor JMW47_RS13110 PF03120 NAD-dependent DNA ligase OB-fold domain JMW47_RS13110 PF01653 NAD-dependent DNA ligase adenylation domain JMW47_RS13110 PF12826 Helix-hairpin-helix motif JMW47_RS13110 PF03119 NAD-dependent DNA ligase C4 zinc finger domain JMW47_RS13110 PF00533 BRCA1 C Terminus (BRCT) domain JMW47_RS13115 PF03725 3' exoribonuclease family, domain 2 JMW47_RS13115 PF01138 3' exoribonuclease family, domain 1 JMW47_RS13125 PF05697 Bacterial trigger factor protein (TF) JMW47_RS13125 PF05698 Bacterial trigger factor protein (TF) C-terminus JMW47_RS13125 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase JMW47_RS13130 PF00574 Clp protease JMW47_RS13135 PF10431 C-terminal, D2-small domain, of ClpB protein JMW47_RS13135 PF06689 ClpX C4-type zinc finger JMW47_RS13135 PF07724 AAA domain (Cdc48 subfamily) JMW47_RS13140 PF02417 Chromate transporter JMW47_RS13150 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS13150 PF02190 ATP-dependent protease La (LON) substrate-binding domain JMW47_RS13150 PF05362 Lon protease (S16) C-terminal proteolytic domain JMW47_RS13155 PF01926 50S ribosome-binding GTPase JMW47_RS13160 PF07690 Major Facilitator Superfamily JMW47_RS13175 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain JMW47_RS13175 PF00437 Type II/IV secretion system protein JMW47_RS13180 PF00482 Type II secretion system (T2SS), protein F JMW47_RS13185 PF07963 Prokaryotic N-terminal methylation motif JMW47_RS13185 PF00114 Pilin (bacterial filament) JMW47_RS13205 PF05225 helix-turn-helix, Psq domain JMW47_RS13205 PF02810 SEC-C motif JMW47_RS13225 PF02690 Na+/Pi-cotransporter JMW47_RS13230 PF00342 Phosphoglucose isomerase JMW47_RS13235 PF13180 PDZ domain JMW47_RS13240 PF04055 Radical SAM superfamily JMW47_RS13245 PF01228 Glycine radical JMW47_RS13245 PF02901 Pyruvate formate lyase-like JMW47_RS13250 PF03807 NADP oxidoreductase coenzyme F420-dependent JMW47_RS13250 PF14748 Pyrroline-5-carboxylate reductase dimerisation JMW47_RS13255 PF00874 PRD domain JMW47_RS13255 PF00158 Sigma-54 interaction domain JMW47_RS13260 PF03610 PTS system fructose IIA component JMW47_RS13260 PF03830 PTS system sorbose subfamily IIB component JMW47_RS13265 PF03830 PTS system sorbose subfamily IIB component JMW47_RS13265 PF03610 PTS system fructose IIA component JMW47_RS13270 PF03609 PTS system sorbose-specific iic component JMW47_RS13275 PF03613 PTS system mannose/fructose/sorbose family IID component JMW47_RS13280 PF13580 SIS domain JMW47_RS13285 PF17910 FeoB cytosolic helical domain JMW47_RS13285 PF02421 Ferrous iron transport protein B JMW47_RS13285 PF07664 Ferrous iron transport protein B C terminus JMW47_RS13285 PF07670 Nucleoside recognition JMW47_RS13305 PF02308 MgtC family JMW47_RS13310 PF08439 Oligopeptidase F JMW47_RS13310 PF01432 Peptidase family M3 JMW47_RS13315 PF12849 PBP superfamily domain JMW47_RS13320 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS13320 PF00072 Response regulator receiver domain JMW47_RS13325 PF18698 Histidine kinase sensor domain JMW47_RS13325 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS13325 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS13325 PF00672 HAMP domain JMW47_RS13330 PF00072 Response regulator receiver domain JMW47_RS13330 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS13335 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS13340 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS13345 PF00005 ABC transporter JMW47_RS13350 PF01895 PhoU domain JMW47_RS13365 PF01522 Polysaccharide deacetylase JMW47_RS13370 PF10458 Valyl tRNA synthetase tRNA binding arm JMW47_RS13370 PF00133 tRNA synthetases class I (I, L, M and V) JMW47_RS13370 PF08264 Anticodon-binding domain of tRNA JMW47_RS13375 PF00072 Response regulator receiver domain JMW47_RS13375 PF04397 LytTr DNA-binding domain JMW47_RS13385 PF08245 Mur ligase middle domain JMW47_RS13405 PF00269 Small, acid-soluble spore proteins, alpha/beta type JMW47_RS13410 PF01522 Polysaccharide deacetylase JMW47_RS13415 PF10531 SLBB domain JMW47_RS13415 PF13375 RnfC Barrel sandwich hybrid domain JMW47_RS13415 PF13237 4Fe-4S dicluster domain JMW47_RS13415 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit JMW47_RS13425 PF13426 PAS domain JMW47_RS13425 PF02954 Bacterial regulatory protein, Fis family JMW47_RS13425 PF00158 Sigma-54 interaction domain JMW47_RS13430 PF09338 Glycine/sarcosine/betaine reductase component B subunits JMW47_RS13445 PF09338 Glycine/sarcosine/betaine reductase component B subunits JMW47_RS13450 PF09338 Glycine/sarcosine/betaine reductase component B subunits JMW47_RS13460 PF05544 Proline racemase JMW47_RS13475 PF01209 ubiE/COQ5 methyltransferase family JMW47_RS13485 PF02954 Bacterial regulatory protein, Fis family JMW47_RS13485 PF13188 PAS domain JMW47_RS13485 PF00158 Sigma-54 interaction domain JMW47_RS13490 PF03313 Serine dehydratase alpha chain JMW47_RS13495 PF00156 Phosphoribosyl transferase domain JMW47_RS13505 PF05173 Dihydrodipicolinate reductase, C-terminus JMW47_RS13505 PF01113 Dihydrodipicolinate reductase, N-terminus JMW47_RS13515 PF14602 Hexapeptide repeat of succinyl-transferase JMW47_RS13515 PF00132 Bacterial transferase hexapeptide (six repeats) JMW47_RS13515 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal JMW47_RS13520 PF05173 Dihydrodipicolinate reductase, C-terminus JMW47_RS13520 PF01113 Dihydrodipicolinate reductase, N-terminus JMW47_RS13525 PF00701 Dihydrodipicolinate synthetase family JMW47_RS13530 PF01118 Semialdehyde dehydrogenase, NAD binding domain JMW47_RS13530 PF02774 Semialdehyde dehydrogenase, dimerisation domain JMW47_RS13535 PF00701 Dihydrodipicolinate synthetase family JMW47_RS13540 PF03315 Serine dehydratase beta chain JMW47_RS13540 PF03313 Serine dehydratase alpha chain JMW47_RS13545 PF07687 Peptidase dimerisation domain JMW47_RS13545 PF01546 Peptidase family M20/M25/M40 JMW47_RS13555 PF13649 Methyltransferase domain JMW47_RS13560 PF01430 Hsp33 protein JMW47_RS13570 PF00005 ABC transporter JMW47_RS13570 PF17755 UvrA DNA-binding domain JMW47_RS13570 PF17760 UvrA interaction domain JMW47_RS13575 PF04069 Substrate binding domain of ABC-type glycine betaine transport system JMW47_RS13580 PF00571 CBS domain JMW47_RS13580 PF00005 ABC transporter JMW47_RS13610 PF01554 MatE JMW47_RS13620 PF00881 Nitroreductase family JMW47_RS13630 PF02096 60Kd inner membrane protein JMW47_RS13635 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS13635 PF00072 Response regulator receiver domain JMW47_RS13640 PF00672 HAMP domain JMW47_RS13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS13640 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS13645 PF00005 ABC transporter JMW47_RS13660 PF07690 Major Facilitator Superfamily JMW47_RS13665 PF13411 MerR HTH family regulatory protein JMW47_RS13675 PF17760 UvrA interaction domain JMW47_RS13675 PF17755 UvrA DNA-binding domain JMW47_RS13675 PF00005 ABC transporter JMW47_RS13690 PF00072 Response regulator receiver domain JMW47_RS13690 PF00196 Bacterial regulatory proteins, luxR family JMW47_RS13700 PF02687 FtsX-like permease family JMW47_RS13705 PF00005 ABC transporter JMW47_RS13710 PF04122 Putative cell wall binding repeat 2 JMW47_RS13710 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS13720 PF07282 Putative transposase DNA-binding domain JMW47_RS13720 PF12323 Helix-turn-helix domain JMW47_RS13720 PF01385 Probable transposase JMW47_RS13730 PF13411 MerR HTH family regulatory protein JMW47_RS13735 PF02525 Flavodoxin-like fold JMW47_RS13745 PF01042 Endoribonuclease L-PSP JMW47_RS13750 PF13188 PAS domain JMW47_RS13750 PF00158 Sigma-54 interaction domain JMW47_RS13750 PF02954 Bacterial regulatory protein, Fis family JMW47_RS13755 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS13760 PF01546 Peptidase family M20/M25/M40 JMW47_RS13760 PF07687 Peptidase dimerisation domain JMW47_RS13765 PF07969 Amidohydrolase family JMW47_RS13770 PF01979 Amidohydrolase family JMW47_RS13775 PF00860 Permease family JMW47_RS13780 PF01180 Dihydroorotate dehydrogenase JMW47_RS13785 PF01979 Amidohydrolase family JMW47_RS13790 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain JMW47_RS13790 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase JMW47_RS13795 PF04963 Sigma-54 factor, core binding domain JMW47_RS13795 PF04552 Sigma-54, DNA binding domain JMW47_RS13795 PF00309 Sigma-54 factor, Activator interacting domain (AID) JMW47_RS13800 PF04198 Putative sugar-binding domain JMW47_RS13805 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain JMW47_RS13805 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain JMW47_RS13810 PF00162 Phosphoglycerate kinase JMW47_RS13815 PF00121 Triosephosphate isomerase JMW47_RS13820 PF01676 Metalloenzyme superfamily JMW47_RS13820 PF06415 BPG-independent PGAM N-terminus (iPGM_N) JMW47_RS13825 PF03952 Enolase, N-terminal domain JMW47_RS13825 PF00113 Enolase, C-terminal TIM barrel domain JMW47_RS13855 PF01161 Phosphatidylethanolamine-binding protein JMW47_RS13870 PF17876 Cold shock domain JMW47_RS13870 PF08206 Ribonuclease B OB domain JMW47_RS13870 PF00773 RNB domain JMW47_RS13870 PF00575 S1 RNA binding domain JMW47_RS13900 PF01668 SmpB protein JMW47_RS13955 PF01965 DJ-1/PfpI family JMW47_RS13975 PF03123 CAT RNA binding domain JMW47_RS13975 PF00874 PRD domain JMW47_RS13980 PF02378 Phosphotransferase system, EIIC JMW47_RS13980 PF00367 phosphotransferase system, EIIB JMW47_RS13980 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS13985 PF00232 Glycosyl hydrolase family 1 JMW47_RS14000 PF00005 ABC transporter JMW47_RS14000 PF08402 TOBE domain JMW47_RS14005 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS14010 PF01116 Fructose-bisphosphate aldolase class-II JMW47_RS14015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS14020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS14020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14020 PF00874 PRD domain JMW47_RS14020 PF05043 Mga helix-turn-helix domain JMW47_RS14020 PF08279 HTH domain JMW47_RS14025 PF02378 Phosphotransferase system, EIIC JMW47_RS14025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS14025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14035 PF00874 PRD domain JMW47_RS14035 PF03123 CAT RNA binding domain JMW47_RS14040 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS14040 PF00367 phosphotransferase system, EIIB JMW47_RS14040 PF02378 Phosphotransferase system, EIIC JMW47_RS14045 PF00232 Glycosyl hydrolase family 1 JMW47_RS14050 PF00881 Nitroreductase family JMW47_RS14055 PF01022 Bacterial regulatory protein, arsR family JMW47_RS14065 PF10400 Virulence activator alpha C-term JMW47_RS14065 PF03551 Transcriptional regulator PadR-like family JMW47_RS14070 PF07690 Major Facilitator Superfamily JMW47_RS14075 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS14075 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMW47_RS14080 PF01381 Helix-turn-helix JMW47_RS14085 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase JMW47_RS14095 PF00072 Response regulator receiver domain JMW47_RS14095 PF04397 LytTr DNA-binding domain JMW47_RS14110 PF00005 ABC transporter JMW47_RS14120 PF00367 phosphotransferase system, EIIB JMW47_RS14120 PF02378 Phosphotransferase system, EIIC JMW47_RS14120 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS14125 PF00232 Glycosyl hydrolase family 1 JMW47_RS14130 PF00881 Nitroreductase family JMW47_RS14135 PF02082 Transcriptional regulator JMW47_RS14155 PF00365 Phosphofructokinase JMW47_RS14160 PF00834 Ribulose-phosphate 3 epimerase family JMW47_RS14165 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMW47_RS14165 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMW47_RS14170 PF00874 PRD domain JMW47_RS14170 PF05043 Mga helix-turn-helix domain JMW47_RS14170 PF08279 HTH domain JMW47_RS14170 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14175 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMW47_RS14180 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS14190 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS14195 PF00072 Response regulator receiver domain JMW47_RS14195 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS14210 PF06463 Molybdenum Cofactor Synthesis C JMW47_RS14210 PF04055 Radical SAM superfamily JMW47_RS14225 PF00005 ABC transporter JMW47_RS14230 PF00664 ABC transporter transmembrane region JMW47_RS14230 PF00005 ABC transporter JMW47_RS14240 PF01546 Peptidase family M20/M25/M40 JMW47_RS14245 PF02378 Phosphotransferase system, EIIC JMW47_RS14245 PF00367 phosphotransferase system, EIIB JMW47_RS14250 PF03606 C4-dicarboxylate anaerobic carrier JMW47_RS14255 PF01546 Peptidase family M20/M25/M40 JMW47_RS14255 PF07687 Peptidase dimerisation domain JMW47_RS14260 PF00874 PRD domain JMW47_RS14260 PF03123 CAT RNA binding domain JMW47_RS14265 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS14265 PF02378 Phosphotransferase system, EIIC JMW47_RS14265 PF00367 phosphotransferase system, EIIB JMW47_RS14270 PF00232 Glycosyl hydrolase family 1 JMW47_RS14275 PF00232 Glycosyl hydrolase family 1 JMW47_RS14280 PF02954 Bacterial regulatory protein, Fis family JMW47_RS14280 PF00158 Sigma-54 interaction domain JMW47_RS14280 PF13426 PAS domain JMW47_RS14285 PF07722 Peptidase C26 JMW47_RS14290 PF13520 Amino acid permease JMW47_RS14295 PF16657 Maltogenic Amylase, C-terminal domain JMW47_RS14295 PF00128 Alpha amylase, catalytic domain JMW47_RS14300 PF07702 UTRA domain JMW47_RS14300 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS14305 PF02378 Phosphotransferase system, EIIC JMW47_RS14305 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS14305 PF00367 phosphotransferase system, EIIB JMW47_RS14310 PF04794 YdjC-like protein JMW47_RS14325 PF00294 pfkB family carbohydrate kinase JMW47_RS14330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS14330 PF02378 Phosphotransferase system, EIIC JMW47_RS14330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14335 PF01116 Fructose-bisphosphate aldolase class-II JMW47_RS14340 PF16657 Maltogenic Amylase, C-terminal domain JMW47_RS14340 PF00128 Alpha amylase, catalytic domain JMW47_RS14360 PF01055 Glycosyl hydrolases family 31 JMW47_RS14365 PF03609 PTS system sorbose-specific iic component JMW47_RS14370 PF03613 PTS system mannose/fructose/sorbose family IID component JMW47_RS14375 PF03610 PTS system fructose IIA component JMW47_RS14375 PF03830 PTS system sorbose subfamily IIB component JMW47_RS14385 PF00480 ROK family JMW47_RS14390 PF00370 FGGY family of carbohydrate kinases, N-terminal domain JMW47_RS14390 PF02782 FGGY family of carbohydrate kinases, C-terminal domain JMW47_RS14395 PF01261 Xylose isomerase-like TIM barrel JMW47_RS14410 PF00367 phosphotransferase system, EIIB JMW47_RS14410 PF02378 Phosphotransferase system, EIIC JMW47_RS14415 PF11975 Family 4 glycosyl hydrolase C-terminal domain JMW47_RS14415 PF02056 Family 4 glycosyl hydrolase JMW47_RS14425 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS14435 PF00005 ABC transporter JMW47_RS14445 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS14445 PF00072 Response regulator receiver domain JMW47_RS14450 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS14455 PF03702 Anhydro-N-acetylmuramic acid kinase JMW47_RS14470 PF02378 Phosphotransferase system, EIIC JMW47_RS14480 PF13580 SIS domain JMW47_RS14485 PF01869 BadF/BadG/BcrA/BcrD ATPase family JMW47_RS14495 PF01385 Probable transposase JMW47_RS14495 PF12323 Helix-turn-helix domain JMW47_RS14495 PF07282 Putative transposase DNA-binding domain JMW47_RS14500 PF01380 SIS domain JMW47_RS14500 PF01418 Helix-turn-helix domain, rpiR family JMW47_RS14515 PF00561 alpha/beta hydrolase fold JMW47_RS14535 PF02861 Clp amino terminal domain, pathogenicity island component JMW47_RS14535 PF17871 AAA lid domain JMW47_RS14535 PF07724 AAA domain (Cdc48 subfamily) JMW47_RS14535 PF10431 C-terminal, D2-small domain, of ClpB protein JMW47_RS14535 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS14550 PF00854 POT family JMW47_RS14555 PF02567 Phenazine biosynthesis-like protein JMW47_RS14565 PF00085 Thioredoxin JMW47_RS14570 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS14575 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS14575 PF00072 Response regulator receiver domain JMW47_RS14580 PF00989 PAS fold JMW47_RS14580 PF13188 PAS domain JMW47_RS14580 PF13426 PAS domain JMW47_RS14580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS14580 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS14590 PF00005 ABC transporter JMW47_RS14600 PF08331 Domain of unknown function (DUF1730) JMW47_RS14620 PF06800 Sugar transport protein JMW47_RS14625 PF05043 Mga helix-turn-helix domain JMW47_RS14625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14625 PF00874 PRD domain JMW47_RS14625 PF08279 HTH domain JMW47_RS14630 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS14630 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS14635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS14645 PF07748 Glycosyl hydrolases family 38 C-terminal domain JMW47_RS14645 PF01074 Glycosyl hydrolases family 38 N-terminal domain JMW47_RS14645 PF09261 Alpha mannosidase middle domain JMW47_RS14650 PF01638 HxlR-like helix-turn-helix JMW47_RS14655 PF02683 Cytochrome C biogenesis protein transmembrane region JMW47_RS14660 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS14660 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMW47_RS14670 PF03734 L,D-transpeptidase catalytic domain JMW47_RS14675 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS14685 PF03812 2-keto-3-deoxygluconate permease JMW47_RS14695 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JMW47_RS14700 PF01557 Fumarylacetoacetate (FAA) hydrolase family JMW47_RS14705 PF00701 Dihydrodipicolinate synthetase family JMW47_RS14715 PF01032 FecCD transport family JMW47_RS14720 PF00005 ABC transporter JMW47_RS14730 PF02867 Ribonucleotide reductase, barrel domain JMW47_RS14730 PF00317 Ribonucleotide reductase, all-alpha domain JMW47_RS14730 PF08343 Ribonucleotide reductase N-terminal JMW47_RS14735 PF00268 Ribonucleotide reductase, small chain JMW47_RS14745 PF12323 Helix-turn-helix domain JMW47_RS14745 PF01385 Probable transposase JMW47_RS14745 PF07282 Putative transposase DNA-binding domain JMW47_RS14755 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS14760 PF00005 ABC transporter JMW47_RS14770 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS14770 PF00072 Response regulator receiver domain JMW47_RS14775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS14780 PF02673 Bacitracin resistance protein BacA JMW47_RS14785 PF00005 ABC transporter JMW47_RS14790 PF02687 FtsX-like permease family JMW47_RS14820 PF00270 DEAD/DEAH box helicase JMW47_RS14820 PF18019 HD domain JMW47_RS14820 PF00271 Helicase conserved C-terminal domain JMW47_RS14830 PF01867 CRISPR associated protein Cas1 JMW47_RS14835 PF09827 CRISPR associated protein Cas2 JMW47_RS14855 PF02632 BioY family JMW47_RS14860 PF00108 Thiolase, N-terminal domain JMW47_RS14860 PF02803 Thiolase, C-terminal domain JMW47_RS14865 PF13193 AMP-binding enzyme C-terminal domain JMW47_RS14865 PF00501 AMP-binding enzyme JMW47_RS14875 PF02441 Flavoprotein JMW47_RS14885 PF00171 Aldehyde dehydrogenase family JMW47_RS14885 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS14890 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS14890 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS14890 PF00563 EAL domain JMW47_RS14915 PF01496 V-type ATPase 116kDa subunit family JMW47_RS14920 PF00137 ATP synthase subunit C JMW47_RS14925 PF01991 ATP synthase (E/31 kDa) subunit JMW47_RS14935 PF01990 ATP synthase (F/14-kDa) subunit JMW47_RS14940 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMW47_RS14940 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMW47_RS14940 PF16886 ATPsynthase alpha/beta subunit N-term extension JMW47_RS14945 PF02874 ATP synthase alpha/beta family, beta-barrel domain JMW47_RS14945 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain JMW47_RS14950 PF01813 ATP synthase subunit D JMW47_RS14960 PF00005 ABC transporter JMW47_RS14960 PF08402 TOBE domain JMW47_RS14965 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS14970 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS14970 PF07702 UTRA domain JMW47_RS14980 PF00367 phosphotransferase system, EIIB JMW47_RS14980 PF02378 Phosphotransferase system, EIIC JMW47_RS14985 PF00128 Alpha amylase, catalytic domain JMW47_RS14985 PF16657 Maltogenic Amylase, C-terminal domain JMW47_RS14990 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS14990 PF07702 UTRA domain JMW47_RS14995 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS15000 PF02378 Phosphotransferase system, EIIC JMW47_RS15005 PF11975 Family 4 glycosyl hydrolase C-terminal domain JMW47_RS15005 PF02056 Family 4 glycosyl hydrolase JMW47_RS15010 PF04794 YdjC-like protein JMW47_RS15015 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit JMW47_RS15030 PF01032 FecCD transport family JMW47_RS15035 PF01032 FecCD transport family JMW47_RS15040 PF00005 ABC transporter JMW47_RS15045 PF01554 MatE JMW47_RS15050 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS15050 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS15050 PF00563 EAL domain JMW47_RS15055 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus JMW47_RS15065 PF03812 2-keto-3-deoxygluconate permease JMW47_RS15070 PF13426 PAS domain JMW47_RS15070 PF02954 Bacterial regulatory protein, Fis family JMW47_RS15070 PF00158 Sigma-54 interaction domain JMW47_RS15080 PF01523 Putative modulator of DNA gyrase JMW47_RS15085 PF01523 Putative modulator of DNA gyrase JMW47_RS15095 PF00561 alpha/beta hydrolase fold JMW47_RS15095 PF08386 TAP-like protein JMW47_RS15100 PF00158 Sigma-54 interaction domain JMW47_RS15100 PF02954 Bacterial regulatory protein, Fis family JMW47_RS15100 PF00989 PAS fold JMW47_RS15105 PF01244 Membrane dipeptidase (Peptidase family M19) JMW47_RS15120 PF07969 Amidohydrolase family JMW47_RS15125 PF03471 Transporter associated domain JMW47_RS15125 PF01595 Cyclin M transmembrane N-terminal domain JMW47_RS15125 PF00571 CBS domain JMW47_RS15130 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS15140 PF02894 Oxidoreductase family, C-terminal alpha/beta domain JMW47_RS15140 PF01408 Oxidoreductase family, NAD-binding Rossmann fold JMW47_RS15150 PF13193 AMP-binding enzyme C-terminal domain JMW47_RS15150 PF00501 AMP-binding enzyme JMW47_RS15155 PF03062 MBOAT, membrane-bound O-acyltransferase family JMW47_RS15160 PF00550 Phosphopantetheine attachment site JMW47_RS15165 PF00455 DeoR C terminal sensor domain JMW47_RS15165 PF08220 DeoR-like helix-turn-helix domain JMW47_RS15170 PF00266 Aminotransferase class-V JMW47_RS15170 PF13419 Haloacid dehalogenase-like hydrolase JMW47_RS15185 PF13171 Protein of unknown function (DUF4004) JMW47_RS15190 PF02915 Rubrerythrin JMW47_RS15200 PF00107 Zinc-binding dehydrogenase JMW47_RS15200 PF08240 Alcohol dehydrogenase GroES-like domain JMW47_RS15205 PF00795 Carbon-nitrogen hydrolase JMW47_RS15210 PF07969 Amidohydrolase family JMW47_RS15215 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) JMW47_RS15215 PF02403 Seryl-tRNA synthetase N-terminal domain JMW47_RS15225 PF00072 Response regulator receiver domain JMW47_RS15225 PF08769 Sporulation initiation factor Spo0A C terminal JMW47_RS15235 PF01546 Peptidase family M20/M25/M40 JMW47_RS15235 PF07687 Peptidase dimerisation domain JMW47_RS15240 PF03806 AbgT putative transporter family JMW47_RS15245 PF00464 Serine hydroxymethyltransferase JMW47_RS15250 PF00690 Cation transporter/ATPase, N-terminus JMW47_RS15250 PF00689 Cation transporting ATPase, C-terminus JMW47_RS15255 PF16916 Dimerisation domain of Zinc Transporter JMW47_RS15255 PF01545 Cation efflux family JMW47_RS15265 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain JMW47_RS15270 PF00892 EamA-like transporter family JMW47_RS15275 PF00155 Aminotransferase class I and II JMW47_RS15285 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS15285 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMW47_RS15310 PF01872 RibD C-terminal domain JMW47_RS15315 PF00664 ABC transporter transmembrane region JMW47_RS15315 PF00005 ABC transporter JMW47_RS15320 PF00005 ABC transporter JMW47_RS15320 PF00664 ABC transporter transmembrane region JMW47_RS15335 PF07729 FCD domain JMW47_RS15335 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS15340 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase JMW47_RS15340 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase JMW47_RS15345 PF02447 GntP family permease JMW47_RS15355 PF12323 Helix-turn-helix domain JMW47_RS15355 PF01385 Probable transposase JMW47_RS15355 PF07282 Putative transposase DNA-binding domain JMW47_RS15380 PF02075 Crossover junction endodeoxyribonuclease RuvC JMW47_RS15385 PF07499 RuvA, C-terminal domain JMW47_RS15385 PF01330 RuvA N terminal domain JMW47_RS15390 PF17864 RuvB AAA lid domain JMW47_RS15390 PF05496 Holliday junction DNA helicase RuvB P-loop domain JMW47_RS15390 PF05491 RuvB C-terminal winged helix domain JMW47_RS15395 PF02547 Queuosine biosynthesis protein JMW47_RS15405 PF01702 Queuine tRNA-ribosyltransferase JMW47_RS15410 PF02699 Preprotein translocase subunit JMW47_RS15425 PF04122 Putative cell wall binding repeat 2 JMW47_RS15425 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15450 PF01043 SecA preprotein cross-linking domain JMW47_RS15450 PF07516 SecA Wing and Scaffold domain JMW47_RS15450 PF07517 SecA DEAD-like domain JMW47_RS15465 PF04122 Putative cell wall binding repeat 2 JMW47_RS15465 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15470 PF04138 GtrA-like protein JMW47_RS15480 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15480 PF04122 Putative cell wall binding repeat 2 JMW47_RS15490 PF08239 Bacterial SH3 domain JMW47_RS15490 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15495 PF02397 Bacterial sugar transferase JMW47_RS15500 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15500 PF04122 Putative cell wall binding repeat 2 JMW47_RS15505 PF03023 Lipid II flippase MurJ JMW47_RS15510 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMW47_RS15510 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMW47_RS15510 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMW47_RS15510 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMW47_RS15515 PF00483 Nucleotidyl transferase JMW47_RS15515 PF01050 Mannose-6-phosphate isomerase JMW47_RS15530 PF00535 Glycosyl transferase family 2 JMW47_RS15535 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase JMW47_RS15535 PF00535 Glycosyl transferase family 2 JMW47_RS15540 PF00535 Glycosyl transferase family 2 JMW47_RS15545 PF00535 Glycosyl transferase family 2 JMW47_RS15550 PF00535 Glycosyl transferase family 2 JMW47_RS15555 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain JMW47_RS15555 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain JMW47_RS15555 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain JMW47_RS15560 PF13439 Glycosyltransferase Family 4 JMW47_RS15560 PF00534 Glycosyl transferases group 1 JMW47_RS15565 PF02719 Polysaccharide biosynthesis protein JMW47_RS15570 PF00877 NlpC/P60 family JMW47_RS15575 PF02638 Glycosyl hydrolase-like 10 JMW47_RS15580 PF03816 Cell envelope-related transcriptional attenuator domain JMW47_RS15585 PF03816 Cell envelope-related transcriptional attenuator domain JMW47_RS15600 PF01255 Putative undecaprenyl diphosphate synthase JMW47_RS15605 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15605 PF08239 Bacterial SH3 domain JMW47_RS15610 PF00563 EAL domain JMW47_RS15610 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS15610 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS15620 PF12950 TaqI-like C-terminal specificity domain JMW47_RS15620 PF07669 Eco57I restriction-modification methylase JMW47_RS15630 PF00381 PTS HPr component phosphorylation site JMW47_RS15635 PF00391 PEP-utilising enzyme, mobile domain JMW47_RS15635 PF05524 PEP-utilising enzyme, N-terminal JMW47_RS15635 PF02896 PEP-utilising enzyme, TIM barrel domain JMW47_RS15665 PF00132 Bacterial transferase hexapeptide (six repeats) JMW47_RS15670 PF03109 ABC1 family JMW47_RS15675 PF01368 DHH family JMW47_RS15675 PF02272 DHHA1 domain JMW47_RS15675 PF10141 Single-strand DNA-specific exonuclease, C terminal domain JMW47_RS15675 PF17768 RecJ OB domain JMW47_RS15680 PF00156 Phosphoribosyl transferase domain JMW47_RS15685 PF02824 TGS domain JMW47_RS15685 PF04607 Region found in RelA / SpoT proteins JMW47_RS15685 PF13291 ACT domain JMW47_RS15690 PF02580 D-Tyr-tRNA(Tyr) deacylase JMW47_RS15695 PF00753 Metallo-beta-lactamase superfamily JMW47_RS15700 PF04055 Radical SAM superfamily JMW47_RS15705 PF13393 Histidyl-tRNA synthetase JMW47_RS15705 PF03129 Anticodon binding domain JMW47_RS15710 PF02938 GAD domain JMW47_RS15710 PF00152 tRNA synthetases class II (D, K and N) JMW47_RS15710 PF01336 OB-fold nucleic acid binding domain JMW47_RS15720 PF00795 Carbon-nitrogen hydrolase JMW47_RS15725 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS15725 PF03466 LysR substrate binding domain JMW47_RS15730 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS15730 PF04122 Putative cell wall binding repeat 2 JMW47_RS15740 PF03553 Na+/H+ antiporter family JMW47_RS15745 PF00155 Aminotransferase class I and II JMW47_RS15755 PF01385 Probable transposase JMW47_RS15755 PF12323 Helix-turn-helix domain JMW47_RS15755 PF07282 Putative transposase DNA-binding domain JMW47_RS15775 PF02583 Metal-sensitive transcriptional repressor JMW47_RS15795 PF00464 Serine hydroxymethyltransferase JMW47_RS15800 PF04101 Glycosyltransferase family 28 C-terminal domain JMW47_RS15800 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase JMW47_RS15805 PF01522 Polysaccharide deacetylase JMW47_RS15815 PF00072 Response regulator receiver domain JMW47_RS15815 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS15820 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS15830 PF01522 Polysaccharide deacetylase JMW47_RS15850 PF04203 Sortase domain JMW47_RS15875 PF00483 Nucleotidyl transferase JMW47_RS15880 PF16363 GDP-mannose 4,6 dehydratase JMW47_RS15885 PF03734 L,D-transpeptidase catalytic domain JMW47_RS15885 PF01476 LysM domain JMW47_RS15895 PF03466 LysR substrate binding domain JMW47_RS15895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS15905 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS15905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family JMW47_RS15910 PF08501 Shikimate dehydrogenase substrate binding domain JMW47_RS15910 PF18317 Shikimate 5'-dehydrogenase C-terminal domain JMW47_RS15915 PF07690 Major Facilitator Superfamily JMW47_RS15925 PF01979 Amidohydrolase family JMW47_RS15930 PF00860 Permease family JMW47_RS15940 PF05525 Branched-chain amino acid transport protein JMW47_RS15965 PF00155 Aminotransferase class I and II JMW47_RS15970 PF03590 Aspartate-ammonia ligase JMW47_RS15990 PF08460 Bacterial SH3 domain JMW47_RS15990 PF05257 CHAP domain JMW47_RS15990 PF01520 N-acetylmuramoyl-L-alanine amidase JMW47_RS16025 PF00155 Aminotransferase class I and II JMW47_RS16030 PF00156 Phosphoribosyl transferase domain JMW47_RS16035 PF01569 PAP2 superfamily JMW47_RS16045 PF00269 Small, acid-soluble spore proteins, alpha/beta type JMW47_RS16075 PF06130 Phosphate propanoyltransferase JMW47_RS16080 PF10371 Domain of unknown function JMW47_RS16080 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JMW47_RS16080 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JMW47_RS16080 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain JMW47_RS16080 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JMW47_RS16085 PF00188 Cysteine-rich secretory protein family JMW47_RS16100 PF01144 Coenzyme A transferase JMW47_RS16105 PF01144 Coenzyme A transferase JMW47_RS16110 PF02803 Thiolase, C-terminal domain JMW47_RS16110 PF00108 Thiolase, N-terminal domain JMW47_RS16115 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS16115 PF03466 LysR substrate binding domain JMW47_RS16120 PF12911 N-terminal TM domain of oligopeptide transport permease C JMW47_RS16120 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS16125 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS16130 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle JMW47_RS16135 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMW47_RS16135 PF00005 ABC transporter JMW47_RS16140 PF00005 ABC transporter JMW47_RS16140 PF08352 Oligopeptide/dipeptide transporter, C-terminal region JMW47_RS16145 PF00999 Sodium/hydrogen exchanger family JMW47_RS16150 PF00874 PRD domain JMW47_RS16150 PF03123 CAT RNA binding domain JMW47_RS16155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS16155 PF00367 phosphotransferase system, EIIB JMW47_RS16155 PF02378 Phosphotransferase system, EIIC JMW47_RS16160 PF12833 Helix-turn-helix domain JMW47_RS16165 PF08245 Mur ligase middle domain JMW47_RS16165 PF01225 Mur ligase family, catalytic domain JMW47_RS16165 PF02875 Mur ligase family, glutamate ligase domain JMW47_RS16170 PF03707 Bacterial signalling protein N terminal repeat JMW47_RS16170 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS16170 PF00563 EAL domain JMW47_RS16175 PF06071 Protein of unknown function (DUF933) JMW47_RS16175 PF01926 50S ribosome-binding GTPase JMW47_RS16185 PF05193 Peptidase M16 inactive domain JMW47_RS16185 PF00675 Insulinase (Peptidase family M16) JMW47_RS16190 PF01790 Prolipoprotein diacylglyceryl transferase JMW47_RS16195 PF01795 MraW methylase family JMW47_RS16205 PF03717 Penicillin-binding Protein dimerisation domain JMW47_RS16205 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS16205 PF03793 PASTA domain JMW47_RS16210 PF08245 Mur ligase middle domain JMW47_RS16210 PF01225 Mur ligase family, catalytic domain JMW47_RS16210 PF02875 Mur ligase family, glutamate ligase domain JMW47_RS16215 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 JMW47_RS16215 PF00953 Glycosyl transferase family 4 JMW47_RS16220 PF08245 Mur ligase middle domain JMW47_RS16220 PF02875 Mur ligase family, glutamate ligase domain JMW47_RS16225 PF01098 Cell cycle protein JMW47_RS16230 PF04101 Glycosyltransferase family 28 C-terminal domain JMW47_RS16230 PF03033 Glycosyltransferase family 28 N-terminal domain JMW47_RS16235 PF03799 Cell division protein FtsQ JMW47_RS16235 PF08478 POTRA domain, FtsQ-type JMW47_RS16250 PF06947 Protein of unknown function (DUF1290) JMW47_RS16255 PF12327 FtsZ family, C-terminal domain JMW47_RS16255 PF00091 Tubulin/FtsZ family, GTPase domain JMW47_RS16265 PF03419 Sporulation factor SpoIIGA JMW47_RS16270 PF04542 Sigma-70 region 2 JMW47_RS16270 PF04545 Sigma-70, region 4 JMW47_RS16275 PF04542 Sigma-70 region 2 JMW47_RS16275 PF04539 Sigma-70 region 3 JMW47_RS16275 PF04545 Sigma-70, region 4 JMW47_RS16280 PF05239 PRC-barrel domain JMW47_RS16285 PF03477 ATP cone domain JMW47_RS16290 PF02578 Multi-copper polyphenol oxidoreductase laccase JMW47_RS16295 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS16295 PF00072 Response regulator receiver domain JMW47_RS16300 PF16736 Single Cache-like JMW47_RS16300 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS16300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS16300 PF00989 PAS fold JMW47_RS16305 PF14045 YIEGIA protein JMW47_RS16310 PF14045 YIEGIA protein JMW47_RS16325 PF01926 50S ribosome-binding GTPase JMW47_RS16325 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal JMW47_RS16330 PF02660 Glycerol-3-phosphate acyltransferase JMW47_RS16335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus JMW47_RS16335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus JMW47_RS16355 PF09547 Stage IV sporulation protein A (spore_IV_A) JMW47_RS16370 PF05167 Uncharacterised ACR (DUF711) JMW47_RS16385 PF01168 Alanine racemase, N-terminal domain JMW47_RS16390 PF04472 Cell division protein SepF JMW47_RS16400 PF01479 S4 domain JMW47_RS16400 PF17774 Putative RNA-binding domain in YlmH JMW47_RS16405 PF05103 DivIVA protein JMW47_RS16410 PF08264 Anticodon-binding domain of tRNA JMW47_RS16410 PF00133 tRNA synthetases class I (I, L, M and V) JMW47_RS16415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) JMW47_RS16415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 JMW47_RS16425 PF08360 QacR-like protein, C-terminal region JMW47_RS16425 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS16430 PF02645 Uncharacterised protein, DegV family COG1307 JMW47_RS16435 PF00557 Metallopeptidase family M24 JMW47_RS16435 PF01321 Creatinase/Prolidase N-terminal domain JMW47_RS16440 PF13520 Amino acid permease JMW47_RS16445 PF01048 Phosphorylase superfamily JMW47_RS16450 PF00579 tRNA synthetases class I (W and Y) JMW47_RS16455 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain JMW47_RS16455 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 JMW47_RS16455 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 JMW47_RS16455 PF07691 PA14 domain JMW47_RS16470 PF06580 Histidine kinase JMW47_RS16470 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS16470 PF07694 5TMR of 5TMR-LYT JMW47_RS16475 PF04397 LytTr DNA-binding domain JMW47_RS16475 PF00072 Response regulator receiver domain JMW47_RS16480 PF02554 Carbon starvation protein CstA JMW47_RS16485 PF01258 Prokaryotic dksA/traR C4-type zinc finger JMW47_RS16490 PF01522 Polysaccharide deacetylase JMW47_RS16495 PF01252 Signal peptidase (SPase) II JMW47_RS16500 PF00849 RNA pseudouridylate synthase JMW47_RS16500 PF01479 S4 domain JMW47_RS16505 PF00156 Phosphoribosyl transferase domain JMW47_RS16510 PF00860 Permease family JMW47_RS16515 PF16326 ABC transporter C-terminal domain JMW47_RS16515 PF00005 ABC transporter JMW47_RS16515 PF12848 ABC transporter JMW47_RS16520 PF05670 NFACT protein RNA binding domain JMW47_RS16525 PF01212 Beta-eliminating lyase JMW47_RS16530 PF01678 Diaminopimelate epimerase JMW47_RS16535 PF08340 Domain of unknown function (DUF1732) JMW47_RS16535 PF03755 YicC-like family, N-terminal region JMW47_RS16540 PF00625 Guanylate kinase JMW47_RS16545 PF01192 RNA polymerase Rpb6 JMW47_RS16550 PF04127 DNA / pantothenate metabolism flavoprotein JMW47_RS16550 PF02441 Flavoprotein JMW47_RS16555 PF00271 Helicase conserved C-terminal domain JMW47_RS16555 PF04851 Type III restriction enzyme, res subunit JMW47_RS16555 PF17764 3′ DNA-binding domain (3′BD) JMW47_RS16555 PF18074 Primosomal protein N C-terminal domain JMW47_RS16555 PF18319 PriA DNA helicase Cys-rich region (CRR) domain JMW47_RS16560 PF01327 Polypeptide deformylase JMW47_RS16565 PF02911 Formyl transferase, C-terminal domain JMW47_RS16565 PF00551 Formyl transferase JMW47_RS16575 PF04298 Putative neutral zinc metallopeptidase JMW47_RS16580 PF01029 NusB family JMW47_RS16580 PF01189 16S rRNA methyltransferase RsmB/F JMW47_RS16585 PF04055 Radical SAM superfamily JMW47_RS16595 PF00069 Protein kinase domain JMW47_RS16595 PF03793 PASTA domain JMW47_RS16605 PF16745 RsgA N-terminal domain JMW47_RS16605 PF03193 RsgA GTPase JMW47_RS16610 PF00834 Ribulose-phosphate 3 epimerase family JMW47_RS16615 PF04263 Thiamin pyrophosphokinase, catalytic domain JMW47_RS16615 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain JMW47_RS16630 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS16630 PF00072 Response regulator receiver domain JMW47_RS16635 PF00989 PAS fold JMW47_RS16635 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS16635 PF16736 Single Cache-like JMW47_RS16635 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS16640 PF09261 Alpha mannosidase middle domain JMW47_RS16640 PF07748 Glycosyl hydrolases family 38 C-terminal domain JMW47_RS16640 PF01074 Glycosyl hydrolases family 38 N-terminal domain JMW47_RS16650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS16650 PF02378 Phosphotransferase system, EIIC JMW47_RS16650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS16655 PF02378 Phosphotransferase system, EIIC JMW47_RS16655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS16655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS16660 PF08279 HTH domain JMW47_RS16660 PF05043 Mga helix-turn-helix domain JMW47_RS16660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS16660 PF00874 PRD domain JMW47_RS16665 PF13411 MerR HTH family regulatory protein JMW47_RS16665 PF07739 TipAS antibiotic-recognition domain JMW47_RS16680 PF00830 Ribosomal L28 family JMW47_RS16685 PF03780 Asp23 family, cell envelope-related function JMW47_RS16690 PF13684 Dihydroxyacetone kinase family JMW47_RS16690 PF02734 DAK2 domain JMW47_RS16695 PF00271 Helicase conserved C-terminal domain JMW47_RS16695 PF17191 RecG wedge domain JMW47_RS16695 PF00270 DEAD/DEAH box helicase JMW47_RS16705 PF01467 Cytidylyltransferase-like JMW47_RS16720 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS16725 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS16735 PF12323 Helix-turn-helix domain JMW47_RS16735 PF01385 Probable transposase JMW47_RS16735 PF07282 Putative transposase DNA-binding domain JMW47_RS16745 PF02156 Glycosyl hydrolase family 26 JMW47_RS16745 PF03425 Carbohydrate binding domain (family 11) JMW47_RS16745 PF00150 Cellulase (glycosyl hydrolase family 5) JMW47_RS16745 PF00404 Dockerin type I domain JMW47_RS16760 PF03062 MBOAT, membrane-bound O-acyltransferase family JMW47_RS16770 PF00375 Sodium:dicarboxylate symporter family JMW47_RS16775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS16775 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain JMW47_RS16780 PF12706 Beta-lactamase superfamily domain JMW47_RS16790 PF02872 5'-nucleotidase, C-terminal domain JMW47_RS16790 PF00149 Calcineurin-like phosphoesterase JMW47_RS16795 PF00072 Response regulator receiver domain JMW47_RS16795 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS16800 PF18698 Histidine kinase sensor domain JMW47_RS16800 PF00672 HAMP domain JMW47_RS16800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS16800 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS16805 PF12704 MacB-like periplasmic core domain JMW47_RS16805 PF02687 FtsX-like permease family JMW47_RS16805 PF00005 ABC transporter JMW47_RS16820 PF12323 Helix-turn-helix domain JMW47_RS16820 PF07282 Putative transposase DNA-binding domain JMW47_RS16820 PF01385 Probable transposase JMW47_RS16850 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS16850 PF17932 Tetracyclin repressor-like, C-terminal domain JMW47_RS16855 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) JMW47_RS16855 PF02806 Alpha amylase, C-terminal all-beta domain JMW47_RS16855 PF00128 Alpha amylase, catalytic domain JMW47_RS16860 PF02631 RecX family JMW47_RS16865 PF01467 Cytidylyltransferase-like JMW47_RS16870 PF01966 HD domain JMW47_RS16880 PF09334 tRNA synthetases class I (M) JMW47_RS16880 PF13603 Leucyl-tRNA synthetase, Domain 2 JMW47_RS16880 PF00133 tRNA synthetases class I (I, L, M and V) JMW47_RS16880 PF08264 Anticodon-binding domain of tRNA JMW47_RS16910 PF17763 Glutaminase/Asparaginase C-terminal domain JMW47_RS16910 PF00710 Asparaginase, N-terminal JMW47_RS16915 PF00155 Aminotransferase class I and II JMW47_RS16920 PF13291 ACT domain JMW47_RS16920 PF00291 Pyridoxal-phosphate dependent enzyme JMW47_RS16925 PF01042 Endoribonuclease L-PSP JMW47_RS16930 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 JMW47_RS16930 PF00367 phosphotransferase system, EIIB JMW47_RS16930 PF02378 Phosphotransferase system, EIIC JMW47_RS16935 PF03123 CAT RNA binding domain JMW47_RS16935 PF00874 PRD domain JMW47_RS16940 PF02378 Phosphotransferase system, EIIC JMW47_RS16940 PF00367 phosphotransferase system, EIIB JMW47_RS16945 PF02056 Family 4 glycosyl hydrolase JMW47_RS16945 PF11975 Family 4 glycosyl hydrolase C-terminal domain JMW47_RS16960 PF07690 Major Facilitator Superfamily JMW47_RS16965 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS16970 PF02557 D-alanyl-D-alanine carboxypeptidase JMW47_RS16975 PF00689 Cation transporting ATPase, C-terminus JMW47_RS16975 PF00690 Cation transporter/ATPase, N-terminus JMW47_RS16980 PF00155 Aminotransferase class I and II JMW47_RS16990 PF14698 Argininosuccinate lyase C-terminal JMW47_RS16990 PF00206 Lyase JMW47_RS17000 PF07943 Penicillin-binding protein 5, C-terminal domain JMW47_RS17000 PF00768 D-alanyl-D-alanine carboxypeptidase JMW47_RS17015 PF03841 L-seryl-tRNA selenium transferase JMW47_RS17015 PF12390 Selenocysteine synthase N terminal JMW47_RS17020 PF00009 Elongation factor Tu GTP binding domain JMW47_RS17020 PF09107 Elongation factor SelB, winged helix JMW47_RS17020 PF09106 Elongation factor SelB, winged helix JMW47_RS17020 PF09105 Elongation factor SelB, winged helix JMW47_RS17020 PF03144 Elongation factor Tu domain 2 JMW47_RS17025 PF00672 HAMP domain JMW47_RS17025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS17025 PF18698 Histidine kinase sensor domain JMW47_RS17025 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS17025 PF00989 PAS fold JMW47_RS17030 PF01238 Phosphomannose isomerase type I JMW47_RS17035 PF01546 Peptidase family M20/M25/M40 JMW47_RS17040 PF05043 Mga helix-turn-helix domain JMW47_RS17040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS17040 PF00874 PRD domain JMW47_RS17040 PF08279 HTH domain JMW47_RS17045 PF02896 PEP-utilising enzyme, TIM barrel domain JMW47_RS17045 PF00381 PTS HPr component phosphorylation site JMW47_RS17045 PF05524 PEP-utilising enzyme, N-terminal JMW47_RS17045 PF00391 PEP-utilising enzyme, mobile domain JMW47_RS17045 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS17050 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS17055 PF02378 Phosphotransferase system, EIIC JMW47_RS17060 PF00557 Metallopeptidase family M24 JMW47_RS17060 PF01321 Creatinase/Prolidase N-terminal domain JMW47_RS17065 PF00155 Aminotransferase class I and II JMW47_RS17070 PF01381 Helix-turn-helix JMW47_RS17080 PF02424 ApbE family JMW47_RS17090 PF03167 Uracil DNA glycosylase superfamily JMW47_RS17095 PF06725 3D domain JMW47_RS17095 PF01476 LysM domain JMW47_RS17105 PF00899 ThiF family JMW47_RS17110 PF00753 Metallo-beta-lactamase superfamily JMW47_RS17110 PF03772 Competence protein JMW47_RS17125 PF00753 Metallo-beta-lactamase superfamily JMW47_RS17125 PF03772 Competence protein JMW47_RS17125 PF13567 Domain of unknown function (DUF4131) JMW47_RS17135 PF01649 Ribosomal protein S20 JMW47_RS17145 PF03418 Germination protease JMW47_RS17160 PF03144 Elongation factor Tu domain 2 JMW47_RS17160 PF00009 Elongation factor Tu GTP binding domain JMW47_RS17160 PF00679 Elongation factor G C-terminus JMW47_RS17160 PF06421 GTP-binding protein LepA C-terminus JMW47_RS17165 PF01743 Poly A polymerase head domain JMW47_RS17165 PF12627 Probable RNA and SrmB- binding site of polymerase A JMW47_RS17165 PF13735 tRNA nucleotidyltransferase domain 2 putative JMW47_RS17170 PF13520 Amino acid permease JMW47_RS17175 PF06969 HemN C-terminal domain JMW47_RS17175 PF04055 Radical SAM superfamily JMW47_RS17180 PF01628 HrcA protein C terminal domain JMW47_RS17185 PF01025 GrpE JMW47_RS17190 PF00012 Hsp70 protein JMW47_RS17195 PF00684 DnaJ central domain JMW47_RS17195 PF01556 DnaJ C terminal domain JMW47_RS17195 PF00226 DnaJ domain JMW47_RS17200 PF00480 ROK family JMW47_RS17205 PF07690 Major Facilitator Superfamily JMW47_RS17210 PF13556 PucR C-terminal helix-turn-helix domain JMW47_RS17210 PF07905 Purine catabolism regulatory protein-like family JMW47_RS17210 PF17853 GGDEF-like domain JMW47_RS17215 PF03459 TOBE domain JMW47_RS17215 PF00005 ABC transporter JMW47_RS17215 PF17912 MalK OB fold domain JMW47_RS17245 PF18395 Cas3 C-terminal domain JMW47_RS17245 PF18019 HD domain JMW47_RS17245 PF00270 DEAD/DEAH box helicase JMW47_RS17255 PF04452 RNA methyltransferase JMW47_RS17260 PF04055 Radical SAM superfamily JMW47_RS17260 PF00919 Uncharacterized protein family UPF0004 JMW47_RS17260 PF01938 TRAM domain JMW47_RS17265 PF01230 HIT domain JMW47_RS17270 PF01165 Ribosomal protein S21 JMW47_RS17275 PF09424 Yqey-like protein JMW47_RS17280 PF03073 TspO/MBR family JMW47_RS17285 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus JMW47_RS17285 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein JMW47_RS17300 PF02562 PhoH-like protein JMW47_RS17305 PF02130 Uncharacterized protein family UPF0054 JMW47_RS17310 PF01219 Prokaryotic diacylglycerol kinase JMW47_RS17315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region JMW47_RS17320 PF01926 50S ribosome-binding GTPase JMW47_RS17320 PF07650 KH domain JMW47_RS17325 PF03448 MgtE intracellular N domain JMW47_RS17325 PF00571 CBS domain JMW47_RS17325 PF01769 Divalent cation transporter JMW47_RS17335 PF02565 Recombination protein O C terminal JMW47_RS17335 PF11967 Recombination protein O N terminal JMW47_RS17345 PF02091 Glycyl-tRNA synthetase alpha subunit JMW47_RS17350 PF02092 Glycyl-tRNA synthetase beta subunit JMW47_RS17350 PF05746 DALR anticodon binding domain JMW47_RS17360 PF09339 IclR helix-turn-helix domain JMW47_RS17360 PF01614 Bacterial transcriptional regulator JMW47_RS17370 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JMW47_RS17370 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JMW47_RS17370 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JMW47_RS17385 PF00871 Acetokinase family JMW47_RS17390 PF01515 Phosphate acetyl/butaryl transferase JMW47_RS17395 PF00155 Aminotransferase class I and II JMW47_RS17400 PF07690 Major Facilitator Superfamily JMW47_RS17405 PF01235 Sodium:alanine symporter family JMW47_RS17410 PF07687 Peptidase dimerisation domain JMW47_RS17410 PF01546 Peptidase family M20/M25/M40 JMW47_RS17415 PF03606 C4-dicarboxylate anaerobic carrier JMW47_RS17425 PF12833 Helix-turn-helix domain JMW47_RS17430 PF03608 PTS system enzyme II sorbitol-specific factor JMW47_RS17435 PF07663 Sorbitol phosphotransferase enzyme II C-terminus JMW47_RS17435 PF03612 Sorbitol phosphotransferase enzyme II N-terminus JMW47_RS17440 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS17440 PF08279 HTH domain JMW47_RS17440 PF00874 PRD domain JMW47_RS17440 PF05043 Mga helix-turn-helix domain JMW47_RS17450 PF03829 PTS system glucitol/sorbitol-specific IIA component JMW47_RS17460 PF08279 HTH domain JMW47_RS17460 PF00571 CBS domain JMW47_RS17465 PF03618 Kinase/pyrophosphorylase JMW47_RS17470 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain JMW47_RS17470 PF02896 PEP-utilising enzyme, TIM barrel domain JMW47_RS17470 PF00391 PEP-utilising enzyme, mobile domain JMW47_RS17485 PF00873 AcrB/AcrD/AcrF family JMW47_RS17500 PF01751 Toprim domain JMW47_RS17500 PF01131 DNA topoisomerase JMW47_RS17505 PF00692 dUTPase JMW47_RS17510 PF00877 NlpC/P60 family JMW47_RS17510 PF08239 Bacterial SH3 domain JMW47_RS17510 PF01476 LysM domain JMW47_RS17515 PF05067 Manganese containing catalase JMW47_RS17530 PF01171 PP-loop family JMW47_RS17550 PF00929 Exonuclease JMW47_RS17550 PF02811 PHP domain JMW47_RS17550 PF14579 Helix-hairpin-helix motif JMW47_RS17550 PF07733 Bacterial DNA polymerase III alpha NTPase domain JMW47_RS17550 PF17657 Bacterial DNA polymerase III alpha subunit finger domain JMW47_RS17555 PF00912 Transglycosylase JMW47_RS17560 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain JMW47_RS17560 PF01588 Putative tRNA binding domain JMW47_RS17560 PF03147 Ferredoxin-fold anticodon binding domain JMW47_RS17560 PF03484 tRNA synthetase B5 domain JMW47_RS17560 PF03483 B3/4 domain JMW47_RS17570 PF03965 Penicillinase repressor JMW47_RS17575 PF00905 Penicillin binding protein transpeptidase domain JMW47_RS17575 PF05569 BlaR1 peptidase M56 JMW47_RS17590 PF03965 Penicillinase repressor JMW47_RS17605 PF01070 FMN-dependent dehydrogenase JMW47_RS17620 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS17625 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS17630 PF00158 Sigma-54 interaction domain JMW47_RS17630 PF13426 PAS domain JMW47_RS17630 PF02954 Bacterial regulatory protein, Fis family JMW47_RS17650 PF00871 Acetokinase family JMW47_RS17660 PF00293 NUDIX domain JMW47_RS17665 PF01594 AI-2E family transporter JMW47_RS17680 PF02554 Carbon starvation protein CstA JMW47_RS17685 PF02445 Quinolinate synthetase A protein JMW47_RS17690 PF00890 FAD binding domain JMW47_RS17695 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain JMW47_RS17695 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain JMW47_RS17735 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS17745 PF00005 ABC transporter JMW47_RS17775 PF07992 Pyridine nucleotide-disulphide oxidoreductase JMW47_RS17780 PF00085 Thioredoxin JMW47_RS17785 PF09338 Glycine/sarcosine/betaine reductase component B subunits JMW47_RS17800 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III JMW47_RS17805 PF02504 Fatty acid synthesis protein JMW47_RS17810 PF01321 Creatinase/Prolidase N-terminal domain JMW47_RS17810 PF00557 Metallopeptidase family M24 JMW47_RS17820 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family JMW47_RS17820 PF03466 LysR substrate binding domain JMW47_RS17825 PF02080 TrkA-C domain JMW47_RS17825 PF06826 Predicted Permease Membrane Region JMW47_RS17825 PF02080 TrkA-C domain JMW47_RS17825 PF06826 Predicted Permease Membrane Region JMW47_RS17830 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JMW47_RS17830 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JMW47_RS17835 PF00171 Aldehyde dehydrogenase family JMW47_RS17840 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal JMW47_RS17840 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal JMW47_RS17850 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain JMW47_RS17850 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain JMW47_RS17855 PF00465 Iron-containing alcohol dehydrogenase JMW47_RS17865 PF05816 Toxic anion resistance protein (TelA) JMW47_RS17870 PF00478 IMP dehydrogenase / GMP reductase domain JMW47_RS17870 PF00571 CBS domain JMW47_RS17875 PF02378 Phosphotransferase system, EIIC JMW47_RS17875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS17880 PF05043 Mga helix-turn-helix domain JMW47_RS17880 PF00874 PRD domain JMW47_RS17880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS17880 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS17880 PF08279 HTH domain JMW47_RS17885 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS17890 PF01232 Mannitol dehydrogenase Rossmann domain JMW47_RS17890 PF08125 Mannitol dehydrogenase C-terminal domain JMW47_RS17895 PF00156 Phosphoribosyl transferase domain JMW47_RS17900 PF00923 Transaldolase/Fructose-6-phosphate aldolase JMW47_RS17905 PF03610 PTS system fructose IIA component JMW47_RS17905 PF00874 PRD domain JMW47_RS17905 PF00158 Sigma-54 interaction domain JMW47_RS17915 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS17920 PF03611 PTS system sugar-specific permease component JMW47_RS17925 PF00107 Zinc-binding dehydrogenase JMW47_RS17925 PF08240 Alcohol dehydrogenase GroES-like domain JMW47_RS17930 PF00107 Zinc-binding dehydrogenase JMW47_RS17930 PF08240 Alcohol dehydrogenase GroES-like domain JMW47_RS17935 PF00456 Transketolase, thiamine diphosphate binding domain JMW47_RS17940 PF02780 Transketolase, C-terminal domain JMW47_RS17940 PF02779 Transketolase, pyrimidine binding domain JMW47_RS17945 PF02502 Ribose/Galactose Isomerase JMW47_RS17950 PF00834 Ribulose-phosphate 3 epimerase family JMW47_RS17955 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain JMW47_RS17955 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I JMW47_RS17955 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II JMW47_RS17955 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III JMW47_RS17960 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS17960 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS17965 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS17965 PF00072 Response regulator receiver domain JMW47_RS17980 PF08402 TOBE domain JMW47_RS17980 PF00005 ABC transporter JMW47_RS17985 PF00528 Binding-protein-dependent transport system inner membrane component JMW47_RS17995 PF00313 'Cold-shock' DNA-binding domain JMW47_RS18005 PF01381 Helix-turn-helix JMW47_RS18055 PF00486 Transcriptional regulatory protein, C terminal JMW47_RS18055 PF00072 Response regulator receiver domain JMW47_RS18060 PF00512 His Kinase A (phospho-acceptor) domain JMW47_RS18060 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase JMW47_RS18060 PF16736 Single Cache-like JMW47_RS18060 PF00989 PAS fold JMW47_RS18070 PF03591 AzlC protein JMW47_RS18075 PF00155 Aminotransferase class I and II JMW47_RS18075 PF00392 Bacterial regulatory proteins, gntR family JMW47_RS18095 PF03610 PTS system fructose IIA component JMW47_RS18095 PF00158 Sigma-54 interaction domain JMW47_RS18095 PF00874 PRD domain JMW47_RS18100 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS18100 PF02378 Phosphotransferase system, EIIC JMW47_RS18100 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS18105 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS18110 PF03611 PTS system sugar-specific permease component JMW47_RS18115 PF08240 Alcohol dehydrogenase GroES-like domain JMW47_RS18115 PF00107 Zinc-binding dehydrogenase JMW47_RS18120 PF00596 Class II Aldolase and Adducin N-terminal domain JMW47_RS18125 PF00596 Class II Aldolase and Adducin N-terminal domain JMW47_RS18130 PF01235 Sodium:alanine symporter family JMW47_RS18135 PF01131 DNA topoisomerase JMW47_RS18135 PF01751 Toprim domain JMW47_RS18145 PF01594 AI-2E family transporter JMW47_RS18150 PF13350 Tyrosine phosphatase family JMW47_RS18155 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS18155 PF00874 PRD domain JMW47_RS18155 PF05043 Mga helix-turn-helix domain JMW47_RS18155 PF08279 HTH domain JMW47_RS18160 PF00294 pfkB family carbohydrate kinase JMW47_RS18165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit JMW47_RS18165 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 JMW47_RS18175 PF01266 FAD dependent oxidoreductase JMW47_RS18175 PF00355 Rieske [2Fe-2S] domain JMW47_RS18195 PF00854 POT family JMW47_RS18200 PF01321 Creatinase/Prolidase N-terminal domain JMW47_RS18200 PF00557 Metallopeptidase family M24 JMW47_RS18205 PF00854 POT family JMW47_RS18210 PF07883 Cupin domain JMW47_RS18240 PF12544 Lysine-2,3-aminomutase JMW47_RS18240 PF04055 Radical SAM superfamily JMW47_RS18255 PF01434 Peptidase family M41 JMW47_RS18255 PF06480 FtsH Extracellular JMW47_RS18255 PF17862 AAA+ lid domain JMW47_RS18255 PF00004 ATPase family associated with various cellular activities (AAA) JMW47_RS18265 PF00082 Subtilase family JMW47_RS18270 PF00082 Subtilase family JMW47_RS18270 PF02225 PA domain JMW47_RS18270 PF06280 Fn3-like domain JMW47_RS18280 PF01336 OB-fold nucleic acid binding domain JMW47_RS18280 PF00152 tRNA synthetases class II (D, K and N) JMW47_RS18285 PF00563 EAL domain JMW47_RS18285 PF00990 Diguanylate cyclase, GGDEF domain JMW47_RS18285 PF00360 Phytochrome region JMW47_RS18285 PF01590 GAF domain JMW47_RS18300 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase JMW47_RS18305 PF00701 Dihydrodipicolinate synthetase family JMW47_RS18310 PF00474 Sodium:solute symporter family JMW47_RS18325 PF00480 ROK family JMW47_RS18330 PF01418 Helix-turn-helix domain, rpiR family JMW47_RS18330 PF01380 SIS domain JMW47_RS18335 PF00027 Cyclic nucleotide-binding domain JMW47_RS18335 PF13545 Crp-like helix-turn-helix domain JMW47_RS18340 PF17179 4Fe-4S dicluster domain JMW47_RS18345 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B JMW47_RS18345 PF00175 Oxidoreductase NAD-binding domain JMW47_RS18350 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain JMW47_RS18350 PF01077 Nitrite and sulphite reductase 4Fe-4S domain JMW47_RS18350 PF13187 4Fe-4S dicluster domain JMW47_RS18355 PF01226 Formate/nitrite transporter JMW47_RS18370 PF00919 Uncharacterized protein family UPF0004 JMW47_RS18370 PF01938 TRAM domain JMW47_RS18370 PF04055 Radical SAM superfamily JMW47_RS18375 PF00132 Bacterial transferase hexapeptide (six repeats) JMW47_RS18380 PF01487 Type I 3-dehydroquinase JMW47_RS18400 PF00484 Carbonic anhydrase JMW47_RS18410 PF00664 ABC transporter transmembrane region JMW47_RS18410 PF00005 ABC transporter JMW47_RS18420 PF01926 50S ribosome-binding GTPase JMW47_RS18420 PF13167 GTP-binding GTPase N-terminal JMW47_RS18420 PF16360 GTP-binding GTPase Middle Region JMW47_RS18435 PF00171 Aldehyde dehydrogenase family JMW47_RS18440 PF01594 AI-2E family transporter JMW47_RS18445 PF00756 Putative esterase JMW47_RS18450 PF00440 Bacterial regulatory proteins, tetR family JMW47_RS18465 PF00155 Aminotransferase class I and II JMW47_RS18475 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg JMW47_RS18475 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase JMW47_RS18475 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II JMW47_RS18495 PF00210 Ferritin-like domain JMW47_RS18500 PF00480 ROK family JMW47_RS18515 PF02811 PHP domain