locus-tag class description DF008_RS00015 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS00015 PF03466 LysR substrate binding domain DF008_RS00025 PF01515 Phosphate acetyl/butaryl transferase DF008_RS00030 PF03063 Prismane/CO dehydrogenase family DF008_RS00035 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DF008_RS00045 PF04961 Formiminotransferase-cyclodeaminase DF008_RS00060 PF02219 Methylenetetrahydrofolate reductase DF008_RS00060 PF02574 Homocysteine S-methyltransferase DF008_RS00065 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DF008_RS00065 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS00075 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit DF008_RS00080 PF04060 Putative Fe-S cluster DF008_RS00080 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit DF008_RS00085 PF00809 Pterin binding enzyme DF008_RS00090 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit DF008_RS00090 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain DF008_RS00110 PF04055 Radical SAM superfamily DF008_RS00110 PF06968 Biotin and Thiamin Synthesis associated domain DF008_RS00135 PF02811 PHP domain DF008_RS00160 PF01618 MotA/TolQ/ExbB proton channel family DF008_RS00165 PF00691 OmpA family DF008_RS00165 PF13677 Membrane MotB of proton-channel complex MotA/MotB DF008_RS00180 PF00563 EAL domain DF008_RS00180 PF03707 Bacterial signalling protein N terminal repeat DF008_RS00180 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS00185 PF00580 UvrD/REP helicase N-terminal domain DF008_RS00185 PF13361 UvrD-like helicase C-terminal domain DF008_RS00190 PF00497 Bacterial extracellular solute-binding proteins, family 3 DF008_RS00195 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS00200 PF00005 ABC transporter DF008_RS00205 PF00266 Aminotransferase class-V DF008_RS00215 PF00114 Pilin (bacterial filament) DF008_RS00215 PF07963 Prokaryotic N-terminal methylation motif DF008_RS00220 PF00881 Nitroreductase family DF008_RS00225 PF03707 Bacterial signalling protein N terminal repeat DF008_RS00225 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS00225 PF00563 EAL domain DF008_RS00230 PF04055 Radical SAM superfamily DF008_RS00235 PF01228 Glycine radical DF008_RS00235 PF02901 Pyruvate formate lyase-like DF008_RS00240 PF01699 Sodium/calcium exchanger protein DF008_RS00245 PF00270 DEAD/DEAH box helicase DF008_RS00245 PF00271 Helicase conserved C-terminal domain DF008_RS00260 PF03608 PTS system enzyme II sorbitol-specific factor DF008_RS00265 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DF008_RS00265 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DF008_RS00270 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DF008_RS00270 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DF008_RS00275 PF03829 PTS system glucitol/sorbitol-specific IIA component DF008_RS00280 PF00106 short chain dehydrogenase DF008_RS00285 PF00384 Molybdopterin oxidoreductase DF008_RS00285 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DF008_RS00285 PF01568 Molydopterin dinucleotide binding domain DF008_RS00290 PF01740 STAS domain DF008_RS00295 PF13581 Histidine kinase-like ATPase domain DF008_RS00300 PF04545 Sigma-70, region 4 DF008_RS00300 PF04539 Sigma-70 region 3 DF008_RS00300 PF04542 Sigma-70 region 2 DF008_RS00305 PF03862 SpoVAC/SpoVAEB sporulation membrane protein DF008_RS00310 PF07451 Stage V sporulation protein AD (SpoVAD) DF008_RS00320 PF00356 Bacterial regulatory proteins, lacI family DF008_RS00335 PF01546 Peptidase family M20/M25/M40 DF008_RS00345 PF00905 Penicillin binding protein transpeptidase domain DF008_RS00345 PF00912 Transglycosylase DF008_RS00355 PF17820 PDZ domain DF008_RS00355 PF05580 SpoIVB peptidase S55 DF008_RS00360 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS00360 PF08239 Bacterial SH3 domain DF008_RS00365 PF00005 ABC transporter DF008_RS00365 PF12848 ABC transporter DF008_RS00380 PF01926 50S ribosome-binding GTPase DF008_RS00380 PF13167 GTP-binding GTPase N-terminal DF008_RS00380 PF16360 GTP-binding GTPase Middle Region DF008_RS00395 PF09186 Domain of unknown function (DUF1949) DF008_RS00395 PF01205 Uncharacterized protein family UPF0029 DF008_RS00405 PF01925 Sulfite exporter TauE/SafE DF008_RS00410 PF02540 NAD synthase DF008_RS00420 PF00356 Bacterial regulatory proteins, lacI family DF008_RS00425 PF00682 HMGL-like DF008_RS00435 PF02515 CoA-transferase family III DF008_RS00440 PF00378 Enoyl-CoA hydratase/isomerase DF008_RS00450 PF02515 CoA-transferase family III DF008_RS00460 PF01012 Electron transfer flavoprotein domain DF008_RS00465 PF00766 Electron transfer flavoprotein FAD-binding domain DF008_RS00465 PF13237 4Fe-4S dicluster domain DF008_RS00465 PF01012 Electron transfer flavoprotein domain DF008_RS00470 PF02954 Bacterial regulatory protein, Fis family DF008_RS00470 PF13426 PAS domain DF008_RS00470 PF00158 Sigma-54 interaction domain DF008_RS00485 PF12724 Flavodoxin domain DF008_RS00490 PF00563 EAL domain DF008_RS00490 PF03707 Bacterial signalling protein N terminal repeat DF008_RS00490 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS00505 PF00392 Bacterial regulatory proteins, gntR family DF008_RS00505 PF07729 FCD domain DF008_RS00510 PF07690 Major Facilitator Superfamily DF008_RS00515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS00515 PF00367 phosphotransferase system, EIIB DF008_RS00515 PF02378 Phosphotransferase system, EIIC DF008_RS00520 PF00232 Glycosyl hydrolase family 1 DF008_RS00525 PF03123 CAT RNA binding domain DF008_RS00525 PF00874 PRD domain DF008_RS00530 PF00072 Response regulator receiver domain DF008_RS00530 PF00486 Transcriptional regulatory protein, C terminal DF008_RS00535 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS00535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS00540 PF00005 ABC transporter DF008_RS00555 PF02915 Rubrerythrin DF008_RS00565 PF01880 Desulfoferrodoxin DF008_RS00570 PF01645 Conserved region in glutamate synthase DF008_RS00585 PF00270 DEAD/DEAH box helicase DF008_RS00585 PF00271 Helicase conserved C-terminal domain DF008_RS00590 PF00682 HMGL-like DF008_RS00595 PF00330 Aconitase family (aconitate hydratase) DF008_RS00600 PF18324 Hypothetical protein TT1725 DF008_RS00600 PF00180 Isocitrate/isopropylmalate dehydrogenase DF008_RS00605 PF01047 MarR family DF008_RS00630 PF01557 Fumarylacetoacetate (FAA) hydrolase family DF008_RS00635 PF02142 MGS-like domain DF008_RS00635 PF01808 AICARFT/IMPCHase bienzyme DF008_RS00645 PF00534 Glycosyl transferases group 1 DF008_RS00645 PF13439 Glycosyltransferase Family 4 DF008_RS00675 PF01546 Peptidase family M20/M25/M40 DF008_RS00680 PF01106 NifU-like domain DF008_RS00695 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS00700 PF12911 N-terminal TM domain of oligopeptide transport permease C DF008_RS00700 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS00705 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DF008_RS00710 PF00005 ABC transporter DF008_RS00710 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DF008_RS00715 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DF008_RS00715 PF00005 ABC transporter DF008_RS00720 PF00874 PRD domain DF008_RS00720 PF00158 Sigma-54 interaction domain DF008_RS00720 PF03610 PTS system fructose IIA component DF008_RS00730 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS00735 PF02378 Phosphotransferase system, EIIC DF008_RS00745 PF02056 Family 4 glycosyl hydrolase DF008_RS00745 PF11975 Family 4 glycosyl hydrolase C-terminal domain DF008_RS00750 PF01661 Macro domain DF008_RS00755 PF12146 Serine aminopeptidase, S33 DF008_RS00765 PF12727 PBP superfamily domain DF008_RS00765 PF12728 Helix-turn-helix domain DF008_RS00775 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS00780 PF17850 CysA C-terminal regulatory domain DF008_RS00780 PF00005 ABC transporter DF008_RS00780 PF12857 TOBE-like domain DF008_RS00785 PF12464 Maltose acetyltransferase DF008_RS00785 PF14602 Hexapeptide repeat of succinyl-transferase DF008_RS00795 PF09383 NIL domain DF008_RS00795 PF00005 ABC transporter DF008_RS00800 PF02653 Branched-chain amino acid transport system / permease component DF008_RS00805 PF04392 ABC transporter substrate binding protein DF008_RS00810 PF00005 ABC transporter DF008_RS00815 PF02653 Branched-chain amino acid transport system / permease component DF008_RS00820 PF01256 Carbohydrate kinase DF008_RS00820 PF03853 YjeF-related protein N-terminus DF008_RS00830 PF01145 SPFH domain / Band 7 family DF008_RS00840 PF00483 Nucleotidyl transferase DF008_RS00850 PF00343 Carbohydrate phosphorylase DF008_RS00855 PF00128 Alpha amylase, catalytic domain DF008_RS00855 PF02903 Alpha amylase, N-terminal ig-like domain DF008_RS00855 PF00395 S-layer homology domain DF008_RS00860 PF00392 Bacterial regulatory proteins, gntR family DF008_RS00860 PF07729 FCD domain DF008_RS00865 PF01276 Orn/Lys/Arg decarboxylase, major domain DF008_RS00865 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DF008_RS00870 PF02675 S-adenosylmethionine decarboxylase DF008_RS00880 PF00491 Arginase family DF008_RS00885 PF00313 'Cold-shock' DNA-binding domain DF008_RS00895 PF13187 4Fe-4S dicluster domain DF008_RS00895 PF02906 Iron only hydrogenase large subunit, C-terminal domain DF008_RS00925 PF00571 CBS domain DF008_RS00925 PF00005 ABC transporter DF008_RS00930 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS00935 PF01545 Cation efflux family DF008_RS00935 PF16916 Dimerisation domain of Zinc Transporter DF008_RS00965 PF01554 MatE DF008_RS00970 PF00575 S1 RNA binding domain DF008_RS00970 PF02401 LytB protein DF008_RS00985 PF00682 HMGL-like DF008_RS00985 PF08502 LeuA allosteric (dimerisation) domain DF008_RS01000 PF00180 Isocitrate/isopropylmalate dehydrogenase DF008_RS01010 PF00266 Aminotransferase class-V DF008_RS01015 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DF008_RS01015 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DF008_RS01025 PF08447 PAS fold DF008_RS01025 PF08448 PAS fold DF008_RS01025 PF05231 MASE1 DF008_RS01025 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS01025 PF00563 EAL domain DF008_RS01025 PF13426 PAS domain DF008_RS01030 PF08497 Radical SAM N-terminal DF008_RS01030 PF11842 Domain of unknown function (DUF3362) DF008_RS01030 PF04055 Radical SAM superfamily DF008_RS01045 PF00005 ABC transporter DF008_RS01050 PF04073 Aminoacyl-tRNA editing domain DF008_RS01055 PF05681 Fumarate hydratase (Fumerase) DF008_RS01065 PF00390 Malic enzyme, N-terminal domain DF008_RS01065 PF03949 Malic enzyme, NAD binding domain DF008_RS01085 PF07702 UTRA domain DF008_RS01085 PF00392 Bacterial regulatory proteins, gntR family DF008_RS01090 PF01979 Amidohydrolase family DF008_RS01105 PF00072 Response regulator receiver domain DF008_RS01105 PF00486 Transcriptional regulatory protein, C terminal DF008_RS01110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS01110 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS01110 PF00989 PAS fold DF008_RS01110 PF16736 Single Cache-like DF008_RS01115 PF13426 PAS domain DF008_RS01115 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS01115 PF00563 EAL domain DF008_RS01120 PF13411 MerR HTH family regulatory protein DF008_RS01120 PF06445 GyrI-like small molecule binding domain DF008_RS01125 PF00005 ABC transporter DF008_RS01125 PF00664 ABC transporter transmembrane region DF008_RS01130 PF00005 ABC transporter DF008_RS01130 PF00664 ABC transporter transmembrane region DF008_RS01165 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS01170 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS01175 PF13416 Bacterial extracellular solute-binding protein DF008_RS01185 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) DF008_RS01195 PF03170 Bacterial cellulose synthase subunit DF008_RS01205 PF02350 UDP-N-acetylglucosamine 2-epimerase DF008_RS01210 PF01476 LysM domain DF008_RS01210 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DF008_RS01235 PF08239 Bacterial SH3 domain DF008_RS01235 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS01240 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS01240 PF04122 Putative cell wall binding repeat 2 DF008_RS01250 PF13361 UvrD-like helicase C-terminal domain DF008_RS01250 PF00580 UvrD/REP helicase N-terminal domain DF008_RS01270 PF12320 Type 5 capsule protein repressor C-terminal domain DF008_RS01270 PF00149 Calcineurin-like phosphoesterase DF008_RS01275 PF13175 AAA ATPase domain DF008_RS01280 PF03471 Transporter associated domain DF008_RS01280 PF01595 Cyclin M transmembrane N-terminal domain DF008_RS01280 PF00571 CBS domain DF008_RS01285 PF01594 AI-2E family transporter DF008_RS01290 PF01546 Peptidase family M20/M25/M40 DF008_RS01290 PF07687 Peptidase dimerisation domain DF008_RS01300 PF12850 Calcineurin-like phosphoesterase superfamily domain DF008_RS01305 PF01513 ATP-NAD kinase DF008_RS01310 PF00005 ABC transporter DF008_RS01330 PF04073 Aminoacyl-tRNA editing domain DF008_RS01335 PF02770 Acyl-CoA dehydrogenase, middle domain DF008_RS01335 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DF008_RS01335 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DF008_RS01340 PF01012 Electron transfer flavoprotein domain DF008_RS01345 PF00766 Electron transfer flavoprotein FAD-binding domain DF008_RS01345 PF01012 Electron transfer flavoprotein domain DF008_RS01350 PF00378 Enoyl-CoA hydratase/isomerase DF008_RS01355 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain DF008_RS01355 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain DF008_RS01365 PF01479 S4 domain DF008_RS01365 PF00849 RNA pseudouridylate synthase DF008_RS01400 PF00356 Bacterial regulatory proteins, lacI family DF008_RS01430 PF02811 PHP domain DF008_RS01435 PF00155 Aminotransferase class I and II DF008_RS01445 PF02127 Aminopeptidase I zinc metalloprotease (M18) DF008_RS01450 PF07702 UTRA domain DF008_RS01450 PF00392 Bacterial regulatory proteins, gntR family DF008_RS01465 PF03830 PTS system sorbose subfamily IIB component DF008_RS01470 PF03609 PTS system sorbose-specific iic component DF008_RS01475 PF03613 PTS system mannose/fructose/sorbose family IID component DF008_RS01480 PF03466 LysR substrate binding domain DF008_RS01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS01490 PF00994 Probable molybdopterin binding domain DF008_RS01490 PF03454 MoeA C-terminal region (domain IV) DF008_RS01490 PF03453 MoeA N-terminal region (domain I and II) DF008_RS01495 PF02606 Tetraacyldisaccharide-1-P 4'-kinase DF008_RS01500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS01505 PF00005 ABC transporter DF008_RS01505 PF00664 ABC transporter transmembrane region DF008_RS01515 PF07687 Peptidase dimerisation domain DF008_RS01515 PF01546 Peptidase family M20/M25/M40 DF008_RS01520 PF02535 ZIP Zinc transporter DF008_RS01530 PF04397 LytTr DNA-binding domain DF008_RS01530 PF00072 Response regulator receiver domain DF008_RS01545 PF01228 Glycine radical DF008_RS01545 PF02901 Pyruvate formate lyase-like DF008_RS01550 PF13187 4Fe-4S dicluster domain DF008_RS01550 PF04055 Radical SAM superfamily DF008_RS01555 PF01381 Helix-turn-helix DF008_RS01555 PF07883 Cupin domain DF008_RS01580 PF12833 Helix-turn-helix domain DF008_RS01580 PF06445 GyrI-like small molecule binding domain DF008_RS01600 PF00476 DNA polymerase family A DF008_RS01600 PF01367 5'-3' exonuclease, C-terminal SAM fold DF008_RS01600 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain DF008_RS01605 PF01121 Dephospho-CoA kinase DF008_RS01615 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DF008_RS01630 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DF008_RS01635 PF00877 NlpC/P60 family DF008_RS01645 PF13375 RnfC Barrel sandwich hybrid domain DF008_RS01645 PF13237 4Fe-4S dicluster domain DF008_RS01645 PF10531 SLBB domain DF008_RS01645 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DF008_RS01650 PF03116 NQR2, RnfD, RnfE family DF008_RS01655 PF04205 FMN-binding domain DF008_RS01660 PF02508 Rnf-Nqr subunit, membrane protein DF008_RS01665 PF02508 Rnf-Nqr subunit, membrane protein DF008_RS01670 PF13187 4Fe-4S dicluster domain DF008_RS01670 PF00037 4Fe-4S binding domain DF008_RS01670 PF04060 Putative Fe-S cluster DF008_RS01700 PF00905 Penicillin binding protein transpeptidase domain DF008_RS01710 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DF008_RS01720 PF01098 Cell cycle protein DF008_RS01730 PF03551 Transcriptional regulator PadR-like family DF008_RS01745 PF00753 Metallo-beta-lactamase superfamily DF008_RS01745 PF00258 Flavodoxin DF008_RS01760 PF00575 S1 RNA binding domain DF008_RS01760 PF10150 Ribonuclease E/G family DF008_RS01790 PF01842 ACT domain DF008_RS01790 PF03447 Homoserine dehydrogenase, NAD binding domain DF008_RS01790 PF00742 Homoserine dehydrogenase DF008_RS01800 PF07670 Nucleoside recognition DF008_RS01805 PF07729 FCD domain DF008_RS01805 PF00392 Bacterial regulatory proteins, gntR family DF008_RS01810 PF09861 Lactate racemase N-terminal domain DF008_RS01815 PF01012 Electron transfer flavoprotein domain DF008_RS01820 PF00766 Electron transfer flavoprotein FAD-binding domain DF008_RS01820 PF01012 Electron transfer flavoprotein domain DF008_RS01825 PF02913 FAD linked oxidases, C-terminal domain DF008_RS01825 PF01565 FAD binding domain DF008_RS01850 PF03061 Thioesterase superfamily DF008_RS01865 PF03060 Nitronate monooxygenase DF008_RS01870 PF00698 Acyl transferase domain DF008_RS01885 PF00109 Beta-ketoacyl synthase, N-terminal domain DF008_RS01885 PF02801 Beta-ketoacyl synthase, C-terminal domain DF008_RS01890 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS01890 PF07694 5TMR of 5TMR-LYT DF008_RS01895 PF00158 Sigma-54 interaction domain DF008_RS01895 PF02954 Bacterial regulatory protein, Fis family DF008_RS01895 PF13426 PAS domain DF008_RS01905 PF07722 Peptidase C26 DF008_RS01910 PF13520 Amino acid permease DF008_RS01960 PF12685 SpoIIIAH-like protein DF008_RS01965 PF03780 Asp23 family, cell envelope-related function DF008_RS01975 PF00814 Glycoprotease family DF008_RS01990 PF00348 Polyprenyl synthetase DF008_RS01995 PF02681 Divergent PAP2 family DF008_RS02005 PF01479 S4 domain DF008_RS02005 PF01728 FtsJ-like methyltransferase DF008_RS02010 PF02463 RecF/RecN/SMC N terminal domain DF008_RS02025 PF00583 Acetyltransferase (GNAT) family DF008_RS02030 PF17820 PDZ domain DF008_RS02030 PF05580 SpoIVB peptidase S55 DF008_RS02035 PF00072 Response regulator receiver domain DF008_RS02035 PF08769 Sporulation initiation factor Spo0A C terminal DF008_RS02050 PF00535 Glycosyl transferase family 2 DF008_RS02065 PF00293 NUDIX domain DF008_RS02075 PF00589 Phage integrase family DF008_RS02075 PF02899 Phage integrase, N-terminal SAM-like domain DF008_RS02085 PF01048 Phosphorylase superfamily DF008_RS02090 PF02885 Glycosyl transferase family, helical bundle domain DF008_RS02090 PF00591 Glycosyl transferase family, a/b domain DF008_RS02090 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain DF008_RS02095 PF02618 YceG-like family DF008_RS02110 PF03717 Penicillin-binding Protein dimerisation domain DF008_RS02110 PF00905 Penicillin binding protein transpeptidase domain DF008_RS02110 PF03793 PASTA domain DF008_RS02200 PF04892 VanZ like family DF008_RS02210 PF04542 Sigma-70 region 2 DF008_RS02210 PF04545 Sigma-70, region 4 DF008_RS02245 PF00035 Double-stranded RNA binding motif DF008_RS02245 PF14622 Ribonuclease-III-like DF008_RS02255 PF06470 SMC proteins Flexible Hinge Domain DF008_RS02255 PF02463 RecF/RecN/SMC N terminal domain DF008_RS02260 PF02881 SRP54-type protein, helical bundle domain DF008_RS02260 PF00448 SRP54-type protein, GTPase domain DF008_RS02265 PF04297 Putative helix-turn-helix protein, YlxM / p13 like DF008_RS02270 PF00448 SRP54-type protein, GTPase domain DF008_RS02270 PF02881 SRP54-type protein, helical bundle domain DF008_RS02270 PF02978 Signal peptide binding domain DF008_RS02300 PF01926 50S ribosome-binding GTPase DF008_RS02305 PF05525 Branched-chain amino acid transport protein DF008_RS02310 PF05525 Branched-chain amino acid transport protein DF008_RS02315 PF00317 Ribonucleotide reductase, all-alpha domain DF008_RS02315 PF03477 ATP cone domain DF008_RS02315 PF02867 Ribonucleotide reductase, barrel domain DF008_RS02325 PF01070 FMN-dependent dehydrogenase DF008_RS02350 PF00005 ABC transporter DF008_RS02355 PF00196 Bacterial regulatory proteins, luxR family DF008_RS02355 PF00072 Response regulator receiver domain DF008_RS02360 PF07730 Histidine kinase DF008_RS02370 PF13335 Magnesium chelatase, subunit ChlI C-terminal DF008_RS02370 PF01078 Magnesium chelatase, subunit ChlI DF008_RS02375 PF17782 DprA winged helix domain DF008_RS02375 PF02481 DNA recombination-mediator protein A DF008_RS02380 PF01396 Topoisomerase DNA binding C4 zinc finger DF008_RS02380 PF01131 DNA topoisomerase DF008_RS02380 PF01751 Toprim domain DF008_RS02385 PF08222 CodY helix-turn-helix domain DF008_RS02385 PF06018 CodY GAF-like domain DF008_RS02390 PF16193 AAA C-terminal domain DF008_RS02390 PF05496 Holliday junction DNA helicase RuvB P-loop domain DF008_RS02390 PF12002 MgsA AAA+ ATPase C terminal DF008_RS02400 PF02082 Transcriptional regulator DF008_RS02405 PF00266 Aminotransferase class-V DF008_RS02410 PF01592 NifU-like N terminal domain DF008_RS02445 PF01475 Ferric uptake regulator family DF008_RS02455 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain DF008_RS02455 PF00753 Metallo-beta-lactamase superfamily DF008_RS02455 PF17770 Ribonuclease J C-terminal domain DF008_RS02465 PF00768 D-alanyl-D-alanine carboxypeptidase DF008_RS02465 PF07943 Penicillin-binding protein 5, C-terminal domain DF008_RS02475 PF12833 Helix-turn-helix domain DF008_RS02475 PF02311 AraC-like ligand binding domain DF008_RS02480 PF02163 Peptidase family M50 DF008_RS02485 PF02616 Segregation and condensation protein ScpA DF008_RS02510 PF02789 Cytosol aminopeptidase family, N-terminal domain DF008_RS02510 PF00883 Cytosol aminopeptidase family, catalytic domain DF008_RS02530 PF02146 Sir2 family DF008_RS02535 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DF008_RS02535 PF13457 GW (Gly-Tryp) dipeptide domain DF008_RS02540 PF01336 OB-fold nucleic acid binding domain DF008_RS02540 PF02811 PHP domain DF008_RS02540 PF14579 Helix-hairpin-helix motif DF008_RS02540 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DF008_RS02540 PF07733 Bacterial DNA polymerase III alpha NTPase domain DF008_RS02540 PF11490 DNA polymerase III polC-type N-terminus II DF008_RS02540 PF00929 Exonuclease DF008_RS02550 PF13184 NusA-like KH domain DF008_RS02550 PF08529 NusA N-terminal domain DF008_RS02550 PF00575 S1 RNA binding domain DF008_RS02555 PF04296 Protein of unknown function (DUF448) DF008_RS02560 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family DF008_RS02585 PF12323 Helix-turn-helix domain DF008_RS02585 PF07282 Putative transposase DNA-binding domain DF008_RS02585 PF01385 Probable transposase DF008_RS02600 PF01687 Riboflavin kinase DF008_RS02600 PF06574 FAD synthetase DF008_RS02615 PF02645 Uncharacterised protein, DegV family COG1307 DF008_RS02625 PF01522 Polysaccharide deacetylase DF008_RS02625 PF11738 Protein of unknown function (DUF3298) DF008_RS02625 PF13739 Deacetylase PdaC DF008_RS02630 PF00675 Insulinase (Peptidase family M16) DF008_RS02630 PF05193 Peptidase M16 inactive domain DF008_RS02635 PF05239 PRC-barrel domain DF008_RS02640 PF00696 Amino acid kinase family DF008_RS02640 PF13840 ACT domain DF008_RS02650 PF12323 Helix-turn-helix domain DF008_RS02650 PF01385 Probable transposase DF008_RS02650 PF07282 Putative transposase DNA-binding domain DF008_RS02655 PF00574 Clp protease DF008_RS02660 PF09397 Ftsk gamma domain DF008_RS02660 PF17854 FtsK alpha domain DF008_RS02660 PF01580 FtsK/SpoIIIE family DF008_RS02675 PF01066 CDP-alcohol phosphatidyltransferase DF008_RS02690 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS02690 PF13426 PAS domain DF008_RS02690 PF00563 EAL domain DF008_RS02700 PF10502 Signal peptidase, peptidase S26 DF008_RS02715 PF10415 Fumarase C C-terminus DF008_RS02715 PF00206 Lyase DF008_RS02735 PF03372 Endonuclease/Exonuclease/phosphatase family DF008_RS02750 PF00534 Glycosyl transferases group 1 DF008_RS02750 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DF008_RS02755 PF03551 Transcriptional regulator PadR-like family DF008_RS02775 PF00005 ABC transporter DF008_RS02790 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS02790 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS02805 PF00313 'Cold-shock' DNA-binding domain DF008_RS02835 PF01381 Helix-turn-helix DF008_RS02880 PF00877 NlpC/P60 family DF008_RS02880 PF08239 Bacterial SH3 domain DF008_RS02880 PF01476 LysM domain DF008_RS02895 PF04865 Baseplate J-like protein DF008_RS02900 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) DF008_RS02945 PF01381 Helix-turn-helix DF008_RS02950 PF07690 Major Facilitator Superfamily DF008_RS02960 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DF008_RS02960 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DF008_RS02965 PF03600 Citrate transporter DF008_RS02965 PF02080 TrkA-C domain DF008_RS02975 PF01566 Natural resistance-associated macrophage protein DF008_RS02980 PF02682 Carboxyltransferase domain, subdomain C and D DF008_RS02985 PF02626 Carboxyltransferase domain, subdomain A and B DF008_RS02990 PF01381 Helix-turn-helix DF008_RS02990 PF08671 Anti-repressor SinI DF008_RS02995 PF13378 Enolase C-terminal domain-like DF008_RS02995 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain DF008_RS03005 PF02129 X-Pro dipeptidyl-peptidase (S15 family) DF008_RS03005 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain DF008_RS03035 PF18389 TrmO C-terminal domain DF008_RS03035 PF01980 tRNA-methyltransferase O DF008_RS03040 PF07687 Peptidase dimerisation domain DF008_RS03040 PF01546 Peptidase family M20/M25/M40 DF008_RS03045 PF02016 LD-carboxypeptidase N-terminal domain DF008_RS03045 PF17676 LD-carboxypeptidase C-terminal domain DF008_RS03060 PF03009 Glycerophosphoryl diester phosphodiesterase family DF008_RS03065 PF00501 AMP-binding enzyme DF008_RS03065 PF13193 AMP-binding enzyme C-terminal domain DF008_RS03065 PF00668 Condensation domain DF008_RS03065 PF00550 Phosphopantetheine attachment site DF008_RS03080 PF00005 ABC transporter DF008_RS03080 PF12848 ABC transporter DF008_RS03080 PF16326 ABC transporter C-terminal domain DF008_RS03090 PF00155 Aminotransferase class I and II DF008_RS03090 PF00392 Bacterial regulatory proteins, gntR family DF008_RS03095 PF01820 D-ala D-ala ligase N-terminus DF008_RS03095 PF07478 D-ala D-ala ligase C-terminus DF008_RS03125 PF04055 Radical SAM superfamily DF008_RS03125 PF16199 Radical_SAM C-terminal domain DF008_RS03170 PF13426 PAS domain DF008_RS03170 PF00563 EAL domain DF008_RS03170 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS03170 PF08447 PAS fold DF008_RS03170 PF08448 PAS fold DF008_RS03170 PF05231 MASE1 DF008_RS03175 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS03180 PF03707 Bacterial signalling protein N terminal repeat DF008_RS03180 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS03180 PF00563 EAL domain DF008_RS03185 PF13411 MerR HTH family regulatory protein DF008_RS03185 PF06445 GyrI-like small molecule binding domain DF008_RS03200 PF02308 MgtC family DF008_RS03205 PF00857 Isochorismatase family DF008_RS03225 PF01522 Polysaccharide deacetylase DF008_RS03230 PF00929 Exonuclease DF008_RS03230 PF13307 Helicase C-terminal domain DF008_RS03230 PF04851 Type III restriction enzyme, res subunit DF008_RS03235 PF00075 RNase H DF008_RS03240 PF00578 AhpC/TSA family DF008_RS03240 PF10417 C-terminal domain of 1-Cys peroxiredoxin DF008_RS03255 PF04294 VanW like protein DF008_RS03270 PF03788 LrgA family DF008_RS03275 PF04172 LrgB-like family DF008_RS03280 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DF008_RS03280 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DF008_RS03290 PF00188 Cysteine-rich secretory protein family DF008_RS03295 PF13739 Deacetylase PdaC DF008_RS03295 PF11738 Protein of unknown function (DUF3298) DF008_RS03295 PF01522 Polysaccharide deacetylase DF008_RS03300 PF00117 Glutamine amidotransferase class-I DF008_RS03305 PF00425 chorismate binding enzyme DF008_RS03305 PF04715 Anthranilate synthase component I, N terminal region DF008_RS03310 PF01063 Amino-transferase class IV DF008_RS03325 PF00809 Pterin binding enzyme DF008_RS03330 PF02152 Dihydroneopterin aldolase DF008_RS03335 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) DF008_RS03340 PF00793 DAHP synthetase I family DF008_RS03340 PF18152 DAHP synthase ferredoxin-like domain DF008_RS03345 PF01807 CHC2 zinc finger DF008_RS03345 PF08275 DNA primase catalytic core, N-terminal domain DF008_RS03345 PF10410 DnaB-helicase binding domain of primase DF008_RS03350 PF04542 Sigma-70 region 2 DF008_RS03350 PF00140 Sigma-70 factor, region 1.2 DF008_RS03350 PF04539 Sigma-70 region 3 DF008_RS03350 PF03979 Sigma-70 factor, region 1.1 DF008_RS03350 PF04545 Sigma-70, region 4 DF008_RS03355 PF04816 tRNA (adenine(22)-N(1))-methyltransferase DF008_RS03360 PF01784 NIF3 (NGG1p interacting factor 3) DF008_RS03365 PF03358 NADPH-dependent FMN reductase DF008_RS03385 PF00155 Aminotransferase class I and II DF008_RS03385 PF00392 Bacterial regulatory proteins, gntR family DF008_RS03395 PF00486 Transcriptional regulatory protein, C terminal DF008_RS03395 PF00072 Response regulator receiver domain DF008_RS03400 PF00672 HAMP domain DF008_RS03400 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS03400 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS03405 PF02687 FtsX-like permease family DF008_RS03405 PF00005 ABC transporter DF008_RS03405 PF12704 MacB-like periplasmic core domain DF008_RS03420 PF00144 Beta-lactamase DF008_RS03430 PF01061 ABC-2 type transporter DF008_RS03435 PF00005 ABC transporter DF008_RS03435 PF00664 ABC transporter transmembrane region DF008_RS03440 PF00664 ABC transporter transmembrane region DF008_RS03440 PF00005 ABC transporter DF008_RS03445 PF02915 Rubrerythrin DF008_RS03450 PF01738 Dienelactone hydrolase family DF008_RS03455 PF03707 Bacterial signalling protein N terminal repeat DF008_RS03455 PF00563 EAL domain DF008_RS03455 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS03470 PF02421 Ferrous iron transport protein B DF008_RS03470 PF07664 Ferrous iron transport protein B C terminus DF008_RS03470 PF17910 FeoB cytosolic helical domain DF008_RS03470 PF07670 Nucleoside recognition DF008_RS03485 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS03490 PF00005 ABC transporter DF008_RS03525 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS03530 PF03180 NLPA lipoprotein DF008_RS03535 PF00989 PAS fold DF008_RS03535 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS03535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS03535 PF16736 Single Cache-like DF008_RS03550 PF03807 NADP oxidoreductase coenzyme F420-dependent DF008_RS03550 PF14748 Pyrroline-5-carboxylate reductase dimerisation DF008_RS03555 PF06207 Protein of unknown function (DUF1002) DF008_RS03565 PF03979 Sigma-70 factor, region 1.1 DF008_RS03565 PF00140 Sigma-70 factor, region 1.2 DF008_RS03565 PF04542 Sigma-70 region 2 DF008_RS03565 PF04539 Sigma-70 region 3 DF008_RS03565 PF04545 Sigma-70, region 4 DF008_RS03570 PF03023 Lipid II flippase MurJ DF008_RS03580 PF01385 Probable transposase DF008_RS03580 PF07282 Putative transposase DNA-binding domain DF008_RS03580 PF12323 Helix-turn-helix domain DF008_RS03585 PF03023 Lipid II flippase MurJ DF008_RS03600 PF00005 ABC transporter DF008_RS03610 PF01554 MatE DF008_RS03625 PF12801 4Fe-4S binding domain DF008_RS03625 PF04205 FMN-binding domain DF008_RS03665 PF13426 PAS domain DF008_RS03665 PF00563 EAL domain DF008_RS03665 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS03675 PF13411 MerR HTH family regulatory protein DF008_RS03675 PF06445 GyrI-like small molecule binding domain DF008_RS03680 PF02421 Ferrous iron transport protein B DF008_RS03680 PF17910 FeoB cytosolic helical domain DF008_RS03680 PF07664 Ferrous iron transport protein B C terminus DF008_RS03680 PF07670 Nucleoside recognition DF008_RS03700 PF01479 S4 domain DF008_RS03700 PF00579 tRNA synthetases class I (W and Y) DF008_RS03705 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DF008_RS03705 PF01522 Polysaccharide deacetylase DF008_RS03715 PF02915 Rubrerythrin DF008_RS03720 PF04015 Domain of unknown function (DUF362) DF008_RS03730 PF12704 MacB-like periplasmic core domain DF008_RS03730 PF02687 FtsX-like permease family DF008_RS03735 PF02687 FtsX-like permease family DF008_RS03735 PF12704 MacB-like periplasmic core domain DF008_RS03735 PF00005 ABC transporter DF008_RS03745 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS03750 PF00486 Transcriptional regulatory protein, C terminal DF008_RS03750 PF00072 Response regulator receiver domain DF008_RS03755 PF00005 ABC transporter DF008_RS03760 PF02687 FtsX-like permease family DF008_RS03775 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DF008_RS03775 PF00175 Oxidoreductase NAD-binding domain DF008_RS03780 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS03780 PF13247 4Fe-4S dicluster domain DF008_RS03780 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DF008_RS03785 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS03785 PF03707 Bacterial signalling protein N terminal repeat DF008_RS03785 PF00563 EAL domain DF008_RS03790 PF00005 ABC transporter DF008_RS03795 PF02687 FtsX-like permease family DF008_RS03800 PF01554 MatE DF008_RS03810 PF02525 Flavodoxin-like fold DF008_RS03825 PF03006 Haemolysin-III related DF008_RS03835 PF13393 Histidyl-tRNA synthetase DF008_RS03845 PF00155 Aminotransferase class I and II DF008_RS03855 PF00117 Glutamine amidotransferase class-I DF008_RS03870 PF01502 Phosphoribosyl-AMP cyclohydrolase DF008_RS03870 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase DF008_RS03875 PF13520 Amino acid permease DF008_RS03890 PF08281 Sigma-70, region 4 DF008_RS03890 PF04542 Sigma-70 region 2 DF008_RS03895 PF13739 Deacetylase PdaC DF008_RS03895 PF11738 Protein of unknown function (DUF3298) DF008_RS03900 PF13739 Deacetylase PdaC DF008_RS03900 PF11738 Protein of unknown function (DUF3298) DF008_RS03905 PF13478 XdhC Rossmann domain DF008_RS03905 PF02625 XdhC and CoxI family DF008_RS03925 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DF008_RS03925 PF00205 Thiamine pyrophosphate enzyme, central domain DF008_RS03925 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain DF008_RS03930 PF14659 Phage integrase, N-terminal SAM-like domain DF008_RS03930 PF00589 Phage integrase family DF008_RS03960 PF10548 P22AR C-terminal domain DF008_RS03960 PF02498 BRO family, N-terminal domain DF008_RS03995 PF00436 Single-strand binding protein family DF008_RS04020 PF05866 Endodeoxyribonuclease RusA DF008_RS04060 PF10668 Phage terminase small subunit DF008_RS04070 PF01938 TRAM domain DF008_RS04070 PF04055 Radical SAM superfamily DF008_RS04070 PF00919 Uncharacterized protein family UPF0004 DF008_RS04140 PF09393 Phage tail tube protein DF008_RS04195 PF10934 Protein of unknown function (DUF2634) DF008_RS04200 PF04865 Baseplate J-like protein DF008_RS04280 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS04280 PF05257 CHAP domain DF008_RS04280 PF08460 Bacterial SH3 domain DF008_RS04300 PF05067 Manganese containing catalase DF008_RS04305 PF03190 Protein of unknown function, DUF255 DF008_RS04315 PF12146 Serine aminopeptidase, S33 DF008_RS04320 PF01381 Helix-turn-helix DF008_RS04330 PF01476 LysM domain DF008_RS04330 PF06725 3D domain DF008_RS04340 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DF008_RS04340 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DF008_RS04340 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DF008_RS04340 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DF008_RS04345 PF03631 Virulence factor BrkB DF008_RS04350 PF00989 PAS fold DF008_RS04350 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS04350 PF18698 Histidine kinase sensor domain DF008_RS04350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS04350 PF00672 HAMP domain DF008_RS04355 PF03447 Homoserine dehydrogenase, NAD binding domain DF008_RS04355 PF00742 Homoserine dehydrogenase DF008_RS04355 PF01842 ACT domain DF008_RS04370 PF00561 alpha/beta hydrolase fold DF008_RS04385 PF01869 BadF/BadG/BcrA/BcrD ATPase family DF008_RS04395 PF00005 ABC transporter DF008_RS04400 PF02653 Branched-chain amino acid transport system / permease component DF008_RS04405 PF13407 Periplasmic binding protein domain DF008_RS04410 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DF008_RS04410 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DF008_RS04420 PF03814 Potassium-transporting ATPase A subunit DF008_RS04435 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS04440 PF00132 Bacterial transferase hexapeptide (six repeats) DF008_RS04450 PF00557 Metallopeptidase family M24 DF008_RS04460 PF01541 GIY-YIG catalytic domain DF008_RS04465 PF08543 Phosphomethylpyrimidine kinase DF008_RS04480 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS04490 PF00005 ABC transporter DF008_RS04490 PF13732 Domain of unknown function (DUF4162) DF008_RS04500 PF00392 Bacterial regulatory proteins, gntR family DF008_RS04505 PF00005 ABC transporter DF008_RS04530 PF01979 Amidohydrolase family DF008_RS04540 PF00005 ABC transporter DF008_RS04545 PF12679 ABC-2 family transporter protein DF008_RS04550 PF00563 EAL domain DF008_RS04550 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS04550 PF03707 Bacterial signalling protein N terminal repeat DF008_RS04555 PF00392 Bacterial regulatory proteins, gntR family DF008_RS04560 PF00005 ABC transporter DF008_RS04575 PF00924 Mechanosensitive ion channel DF008_RS04575 PF05552 Conserved TM helix DF008_RS04585 PF00258 Flavodoxin DF008_RS04585 PF00753 Metallo-beta-lactamase superfamily DF008_RS04590 PF00072 Response regulator receiver domain DF008_RS04590 PF00486 Transcriptional regulatory protein, C terminal DF008_RS04595 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS04595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS04600 PF01820 D-ala D-ala ligase N-terminus DF008_RS04600 PF07478 D-ala D-ala ligase C-terminus DF008_RS04605 PF02557 D-alanyl-D-alanine carboxypeptidase DF008_RS04610 PF00842 Alanine racemase, C-terminal domain DF008_RS04610 PF01168 Alanine racemase, N-terminal domain DF008_RS04610 PF01757 Acyltransferase family DF008_RS04625 PF02777 Iron/manganese superoxide dismutases, C-terminal domain DF008_RS04625 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain DF008_RS04630 PF13537 Glutamine amidotransferase domain DF008_RS04630 PF00733 Asparagine synthase DF008_RS04635 PF13180 PDZ domain DF008_RS04640 PF02342 TerD domain DF008_RS04645 PF02342 TerD domain DF008_RS04650 PF02342 TerD domain DF008_RS04655 PF00689 Cation transporting ATPase, C-terminus DF008_RS04655 PF00690 Cation transporter/ATPase, N-terminus DF008_RS04660 PF14266 Putative component of 'biosynthetic module' DF008_RS04665 PF05816 Toxic anion resistance protein (TelA) DF008_RS04695 PF05684 Protein of unknown function (DUF819) DF008_RS04700 PF01244 Membrane dipeptidase (Peptidase family M19) DF008_RS04705 PF01032 FecCD transport family DF008_RS04710 PF01032 FecCD transport family DF008_RS04715 PF00005 ABC transporter DF008_RS04720 PF01497 Periplasmic binding protein DF008_RS04725 PF00563 EAL domain DF008_RS04725 PF00360 Phytochrome region DF008_RS04725 PF01590 GAF domain DF008_RS04725 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS04730 PF02342 TerD domain DF008_RS04735 PF03180 NLPA lipoprotein DF008_RS04740 PF10437 Bacterial lipoate protein ligase C-terminus DF008_RS04740 PF03099 Biotin/lipoate A/B protein ligase family DF008_RS04745 PF03553 Na+/H+ antiporter family DF008_RS04760 PF02347 Glycine cleavage system P-protein DF008_RS04765 PF02347 Glycine cleavage system P-protein DF008_RS04790 PF01385 Probable transposase DF008_RS04790 PF12323 Helix-turn-helix domain DF008_RS04790 PF07282 Putative transposase DNA-binding domain DF008_RS04800 PF01979 Amidohydrolase family DF008_RS04815 PF07883 Cupin domain DF008_RS04815 PF01381 Helix-turn-helix DF008_RS04820 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS04825 PF03009 Glycerophosphoryl diester phosphodiesterase family DF008_RS04830 PF12464 Maltose acetyltransferase DF008_RS04830 PF14602 Hexapeptide repeat of succinyl-transferase DF008_RS04845 PF00005 ABC transporter DF008_RS04855 PF00072 Response regulator receiver domain DF008_RS04855 PF00486 Transcriptional regulatory protein, C terminal DF008_RS04860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS04860 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS04875 PF01638 HxlR-like helix-turn-helix DF008_RS04905 PF00440 Bacterial regulatory proteins, tetR family DF008_RS04905 PF08359 YsiA-like protein, C-terminal region DF008_RS04910 PF01156 Inosine-uridine preferring nucleoside hydrolase DF008_RS04940 PF00486 Transcriptional regulatory protein, C terminal DF008_RS04940 PF00072 Response regulator receiver domain DF008_RS04945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS04945 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS04950 PF00085 Thioredoxin DF008_RS04955 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS04960 PF01022 Bacterial regulatory protein, arsR family DF008_RS04975 PF03600 Citrate transporter DF008_RS04980 PF01235 Sodium:alanine symporter family DF008_RS04985 PF00885 6,7-dimethyl-8-ribityllumazine synthase DF008_RS04990 PF00925 GTP cyclohydrolase II DF008_RS04990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase DF008_RS04995 PF00677 Lumazine binding domain DF008_RS05000 PF01872 RibD C-terminal domain DF008_RS05000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DF008_RS05005 PF00570 HRDC domain DF008_RS05005 PF09382 RQC domain DF008_RS05005 PF00271 Helicase conserved C-terminal domain DF008_RS05005 PF00270 DEAD/DEAH box helicase DF008_RS05005 PF16124 RecQ zinc-binding DF008_RS05020 PF00899 ThiF family DF008_RS05020 PF00581 Rhodanese-like domain DF008_RS05030 PF06968 Biotin and Thiamin Synthesis associated domain DF008_RS05030 PF04055 Radical SAM superfamily DF008_RS05040 PF03606 C4-dicarboxylate anaerobic carrier DF008_RS05050 PF12804 MobA-like NTP transferase domain DF008_RS05065 PF00994 Probable molybdopterin binding domain DF008_RS05070 PF04055 Radical SAM superfamily DF008_RS05070 PF06463 Molybdenum Cofactor Synthesis C DF008_RS05075 PF01967 MoaC family DF008_RS05110 PF01553 Acyltransferase DF008_RS05145 PF02690 Na+/Pi-cotransporter DF008_RS05160 PF10609 NUBPL iron-transfer P-loop NTPase DF008_RS05170 PF02310 B12 binding domain DF008_RS05170 PF02607 B12 binding domain DF008_RS05175 PF01208 Uroporphyrinogen decarboxylase (URO-D) DF008_RS05185 PF13419 Haloacid dehalogenase-like hydrolase DF008_RS05190 PF07883 Cupin domain DF008_RS05190 PF01381 Helix-turn-helix DF008_RS05195 PF02447 GntP family permease DF008_RS05200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS05200 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS05200 PF00989 PAS fold DF008_RS05200 PF13188 PAS domain DF008_RS05200 PF13426 PAS domain DF008_RS05205 PF02954 Bacterial regulatory protein, Fis family DF008_RS05205 PF00158 Sigma-54 interaction domain DF008_RS05205 PF00072 Response regulator receiver domain DF008_RS05210 PF09338 Glycine/sarcosine/betaine reductase component B subunits DF008_RS05220 PF04397 LytTr DNA-binding domain DF008_RS05220 PF00072 Response regulator receiver domain DF008_RS05245 PF03616 Sodium/glutamate symporter DF008_RS05250 PF00962 Adenosine/AMP deaminase DF008_RS05255 PF12787 EcsC protein family DF008_RS05260 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DF008_RS05265 PF01869 BadF/BadG/BcrA/BcrD ATPase family DF008_RS05270 PF08486 Stage II sporulation protein DF008_RS05270 PF04122 Putative cell wall binding repeat 2 DF008_RS05280 PF00440 Bacterial regulatory proteins, tetR family DF008_RS05285 PF00005 ABC transporter DF008_RS05305 PF01327 Polypeptide deformylase DF008_RS05330 PF02567 Phenazine biosynthesis-like protein DF008_RS05335 PF11208 Protein of unknown function (DUF2992) DF008_RS05340 PF06961 Protein of unknown function (DUF1294) DF008_RS05350 PF00293 NUDIX domain DF008_RS05360 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DF008_RS05360 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DF008_RS05375 PF01869 BadF/BadG/BcrA/BcrD ATPase family DF008_RS05400 PF00497 Bacterial extracellular solute-binding proteins, family 3 DF008_RS05405 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS05410 PF00005 ABC transporter DF008_RS05415 PF03960 ArsC family DF008_RS05425 PF02540 NAD synthase DF008_RS05430 PF01170 Putative RNA methylase family UPF0020 DF008_RS05430 PF02926 THUMP domain DF008_RS05440 PF00072 Response regulator receiver domain DF008_RS05440 PF00486 Transcriptional regulatory protein, C terminal DF008_RS05445 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS05445 PF00672 HAMP domain DF008_RS05445 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS05450 PF01416 tRNA pseudouridine synthase DF008_RS05465 PF07739 TipAS antibiotic-recognition domain DF008_RS05465 PF13411 MerR HTH family regulatory protein DF008_RS05475 PF04239 Protein of unknown function (DUF421) DF008_RS05490 PF01370 NAD dependent epimerase/dehydratase family DF008_RS05510 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DF008_RS05510 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DF008_RS05510 PF13187 4Fe-4S dicluster domain DF008_RS05515 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DF008_RS05515 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS05520 PF03466 LysR substrate binding domain DF008_RS05520 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS05525 PF02342 TerD domain DF008_RS05530 PF02342 TerD domain DF008_RS05535 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DF008_RS05535 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DF008_RS05550 PF00356 Bacterial regulatory proteins, lacI family DF008_RS05550 PF13407 Periplasmic binding protein domain DF008_RS05560 PF08244 Glycosyl hydrolases family 32 C terminal DF008_RS05560 PF00251 Glycosyl hydrolases family 32 N-terminal domain DF008_RS05565 PF00294 pfkB family carbohydrate kinase DF008_RS05570 PF00665 Integrase core domain DF008_RS05570 PF13276 HTH-like domain DF008_RS05570 PF13333 Integrase core domain DF008_RS05590 PF07690 Major Facilitator Superfamily DF008_RS05595 PF07690 Major Facilitator Superfamily DF008_RS05620 PF00300 Histidine phosphatase superfamily (branch 1) DF008_RS05635 PF01553 Acyltransferase DF008_RS05650 PF13382 Adenine deaminase C-terminal domain DF008_RS05650 PF01979 Amidohydrolase family DF008_RS05655 PF00578 AhpC/TSA family DF008_RS05665 PF00689 Cation transporting ATPase, C-terminus DF008_RS05665 PF00690 Cation transporter/ATPase, N-terminus DF008_RS05670 PF01053 Cys/Met metabolism PLP-dependent enzyme DF008_RS05675 PF04204 Homoserine O-succinyltransferase DF008_RS05680 PF01047 MarR family DF008_RS05685 PF01434 Peptidase family M41 DF008_RS05685 PF17862 AAA+ lid domain DF008_RS05685 PF00004 ATPase family associated with various cellular activities (AAA) DF008_RS05685 PF06480 FtsH Extracellular DF008_RS05690 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS05690 PF02702 Osmosensitive K+ channel His kinase sensor domain DF008_RS05690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS05690 PF13493 Domain of unknown function (DUF4118) DF008_RS05695 PF00072 Response regulator receiver domain DF008_RS05695 PF00486 Transcriptional regulatory protein, C terminal DF008_RS05700 PF01544 CorA-like Mg2+ transporter protein DF008_RS05710 PF18152 DAHP synthase ferredoxin-like domain DF008_RS05710 PF00793 DAHP synthetase I family DF008_RS05715 PF01761 3-dehydroquinate synthase DF008_RS05725 PF01264 Chorismate synthase DF008_RS05730 PF00800 Prephenate dehydratase DF008_RS05730 PF01817 Chorismate mutase type II DF008_RS05735 PF08501 Shikimate dehydrogenase substrate binding domain DF008_RS05740 PF01202 Shikimate kinase DF008_RS05745 PF02153 Prephenate dehydrogenase DF008_RS05750 PF00563 EAL domain DF008_RS05750 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS05750 PF03707 Bacterial signalling protein N terminal repeat DF008_RS05755 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS05755 PF17158 Membrane-associated sensor, integral membrane domain DF008_RS05790 PF06445 GyrI-like small molecule binding domain DF008_RS05790 PF12833 Helix-turn-helix domain DF008_RS05820 PF00005 ABC transporter DF008_RS05835 PF08241 Methyltransferase domain DF008_RS05840 PF04073 Aminoacyl-tRNA editing domain DF008_RS05865 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS05870 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DF008_RS05890 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS05895 PF00239 Resolvase, N terminal domain DF008_RS05895 PF02796 Helix-turn-helix domain of resolvase DF008_RS05905 PF00465 Iron-containing alcohol dehydrogenase DF008_RS05910 PF00936 BMC domain DF008_RS05915 PF10662 Ethanolamine utilisation - propanediol utilisation DF008_RS05920 PF00072 Response regulator receiver domain DF008_RS05920 PF03861 ANTAR domain DF008_RS05925 PF07568 Histidine kinase DF008_RS05925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS05925 PF12282 Signal transduction histidine kinase DF008_RS05930 PF06277 Ethanolamine utilisation protein EutA DF008_RS05935 PF06751 Ethanolamine ammonia lyase large subunit (EutB) DF008_RS05945 PF00936 BMC domain DF008_RS05950 PF00936 BMC domain DF008_RS05955 PF00171 Aldehyde dehydrogenase family DF008_RS05955 PF00465 Iron-containing alcohol dehydrogenase DF008_RS05960 PF00936 BMC domain DF008_RS05980 PF03319 Ethanolamine utilisation protein EutN/carboxysome DF008_RS05990 PF04346 Ethanolamine utilisation protein, EutH DF008_RS05995 PF06249 Ethanolamine utilisation protein EutQ DF008_RS06015 PF03806 AbgT putative transporter family DF008_RS06020 PF00155 Aminotransferase class I and II DF008_RS06025 PF00005 ABC transporter DF008_RS06050 PF00589 Phage integrase family DF008_RS06050 PF02899 Phage integrase, N-terminal SAM-like domain DF008_RS06065 PF04232 Stage V sporulation protein S (SpoVS) DF008_RS06070 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit DF008_RS06080 PF02785 Biotin carboxylase C-terminal domain DF008_RS06080 PF00289 Biotin carboxylase, N-terminal domain DF008_RS06080 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DF008_RS06085 PF00364 Biotin-requiring enzyme DF008_RS06130 PF00005 ABC transporter DF008_RS06140 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS06140 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS06145 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DF008_RS06145 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DF008_RS06150 PF13302 Acetyltransferase (GNAT) domain DF008_RS06155 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS06155 PF03466 LysR substrate binding domain DF008_RS06170 PF00005 ABC transporter DF008_RS06180 PF00072 Response regulator receiver domain DF008_RS06180 PF00486 Transcriptional regulatory protein, C terminal DF008_RS06185 PF13486 Reductive dehalogenase subunit DF008_RS06185 PF12838 4Fe-4S dicluster domain DF008_RS06190 PF00486 Transcriptional regulatory protein, C terminal DF008_RS06190 PF00072 Response regulator receiver domain DF008_RS06195 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS06195 PF07689 KaiB domain DF008_RS06195 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS06200 PF12704 MacB-like periplasmic core domain DF008_RS06200 PF02687 FtsX-like permease family DF008_RS06200 PF00005 ABC transporter DF008_RS06235 PF04474 Protein of unknown function (DUF554) DF008_RS06240 PF04073 Aminoacyl-tRNA editing domain DF008_RS06255 PF01546 Peptidase family M20/M25/M40 DF008_RS06260 PF06838 Methionine gamma-lyase DF008_RS06275 PF01119 DNA mismatch repair protein, C-terminal domain DF008_RS06275 PF08676 MutL C terminal dimerisation domain DF008_RS06285 PF00005 ABC transporter DF008_RS06290 PF09084 NMT1/THI5 like DF008_RS06295 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS06310 PF01638 HxlR-like helix-turn-helix DF008_RS06320 PF00293 NUDIX domain DF008_RS06335 PF04122 Putative cell wall binding repeat 2 DF008_RS06335 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS06345 PF17099 Tryptophan transporter TrpP DF008_RS06370 PF00313 'Cold-shock' DNA-binding domain DF008_RS06395 PF02627 Carboxymuconolactone decarboxylase family DF008_RS06420 PF01925 Sulfite exporter TauE/SafE DF008_RS06425 PF12833 Helix-turn-helix domain DF008_RS06430 PF12146 Serine aminopeptidase, S33 DF008_RS06435 PF00440 Bacterial regulatory proteins, tetR family DF008_RS06445 PF00258 Flavodoxin DF008_RS06450 PF00082 Subtilase family DF008_RS06455 PF00561 alpha/beta hydrolase fold DF008_RS06460 PF00440 Bacterial regulatory proteins, tetR family DF008_RS06460 PF18665 Tetracyclin repressor-like, C-terminal domain DF008_RS06480 PF04892 VanZ like family DF008_RS06505 PF12833 Helix-turn-helix domain DF008_RS06515 PF07724 AAA domain (Cdc48 subfamily) DF008_RS06515 PF00004 ATPase family associated with various cellular activities (AAA) DF008_RS06515 PF02861 Clp amino terminal domain, pathogenicity island component DF008_RS06515 PF10431 C-terminal, D2-small domain, of ClpB protein DF008_RS06515 PF17871 AAA lid domain DF008_RS06530 PF00392 Bacterial regulatory proteins, gntR family DF008_RS06535 PF00005 ABC transporter DF008_RS06550 PF01546 Peptidase family M20/M25/M40 DF008_RS06550 PF07687 Peptidase dimerisation domain DF008_RS06555 PF01177 Asp/Glu/Hydantoin racemase DF008_RS06565 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain DF008_RS06565 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain DF008_RS06570 PF00202 Aminotransferase class-III DF008_RS06580 PF01960 ArgJ family DF008_RS06585 PF02774 Semialdehyde dehydrogenase, dimerisation domain DF008_RS06585 PF01118 Semialdehyde dehydrogenase, NAD binding domain DF008_RS06590 PF00583 Acetyltransferase (GNAT) family DF008_RS06590 PF14268 YoaP-like DF008_RS06600 PF00440 Bacterial regulatory proteins, tetR family DF008_RS06600 PF02909 Tetracyclin repressor-like, C-terminal domain DF008_RS06620 PF13443 Cro/C1-type HTH DNA-binding domain DF008_RS06635 PF01418 Helix-turn-helix domain, rpiR family DF008_RS06635 PF01380 SIS domain DF008_RS06640 PF06962 Putative rRNA methylase DF008_RS06645 PF00849 RNA pseudouridylate synthase DF008_RS06645 PF01479 S4 domain DF008_RS06650 PF01594 AI-2E family transporter DF008_RS06660 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain DF008_RS06660 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain DF008_RS06665 PF13840 ACT domain DF008_RS06665 PF00696 Amino acid kinase family DF008_RS06665 PF01842 ACT domain DF008_RS06700 PF00781 Diacylglycerol kinase catalytic domain DF008_RS06730 PF14659 Phage integrase, N-terminal SAM-like domain DF008_RS06730 PF00589 Phage integrase family DF008_RS06740 PF00005 ABC transporter DF008_RS06740 PF12848 ABC transporter DF008_RS06765 PF01799 [2Fe-2S] binding domain DF008_RS06765 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DF008_RS06765 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DF008_RS06775 PF00860 Permease family DF008_RS06790 PF01180 Dihydroorotate dehydrogenase DF008_RS06795 PF01979 Amidohydrolase family DF008_RS06800 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DF008_RS06800 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DF008_RS06810 PF01799 [2Fe-2S] binding domain DF008_RS06810 PF00111 2Fe-2S iron-sulfur cluster binding domain DF008_RS06815 PF01979 Amidohydrolase family DF008_RS06820 PF01979 Amidohydrolase family DF008_RS06825 PF01546 Peptidase family M20/M25/M40 DF008_RS06825 PF07687 Peptidase dimerisation domain DF008_RS06830 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS06840 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DF008_RS06840 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DF008_RS06845 PF00111 2Fe-2S iron-sulfur cluster binding domain DF008_RS06845 PF01799 [2Fe-2S] binding domain DF008_RS06850 PF01979 Amidohydrolase family DF008_RS06855 PF00860 Permease family DF008_RS06860 PF00860 Permease family DF008_RS06875 PF12102 Domain of unknown function (DUF3578) DF008_RS06875 PF07728 AAA domain (dynein-related subfamily) DF008_RS06890 PF06177 QueT transporter DF008_RS06900 PF01799 [2Fe-2S] binding domain DF008_RS06900 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DF008_RS06900 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DF008_RS06905 PF00111 2Fe-2S iron-sulfur cluster binding domain DF008_RS06905 PF01799 [2Fe-2S] binding domain DF008_RS06915 PF00999 Sodium/hydrogen exchanger family DF008_RS06935 PF00005 ABC transporter DF008_RS06940 PF00270 DEAD/DEAH box helicase DF008_RS06940 PF00271 Helicase conserved C-terminal domain DF008_RS06945 PF00860 Permease family DF008_RS06950 PF01554 MatE DF008_RS06960 PF00923 Transaldolase/Fructose-6-phosphate aldolase DF008_RS06965 PF00455 DeoR C terminal sensor domain DF008_RS06965 PF08220 DeoR-like helix-turn-helix domain DF008_RS06975 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS06975 PF13426 PAS domain DF008_RS06975 PF00672 HAMP domain DF008_RS06975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS06980 PF00072 Response regulator receiver domain DF008_RS06980 PF00486 Transcriptional regulatory protein, C terminal DF008_RS06985 PF00403 Heavy-metal-associated domain DF008_RS07005 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS07010 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS07010 PF14821 Threonine synthase N terminus DF008_RS07015 PF08544 GHMP kinases C terminal DF008_RS07015 PF00288 GHMP kinases N terminal domain DF008_RS07045 PF00583 Acetyltransferase (GNAT) family DF008_RS07070 PF04551 GcpE protein DF008_RS07075 PF17820 PDZ domain DF008_RS07075 PF02163 Peptidase family M50 DF008_RS07095 PF03707 Bacterial signalling protein N terminal repeat DF008_RS07095 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS07095 PF00563 EAL domain DF008_RS07105 PF01255 Putative undecaprenyl diphosphate synthase DF008_RS07135 PF07943 Penicillin-binding protein 5, C-terminal domain DF008_RS07135 PF00768 D-alanyl-D-alanine carboxypeptidase DF008_RS07150 PF02659 Putative manganese efflux pump DF008_RS07155 PF00488 MutS domain V DF008_RS07155 PF01713 Smr domain DF008_RS07160 PF01139 tRNA-splicing ligase RtcB DF008_RS07170 PF04294 VanW like protein DF008_RS07190 PF05343 M42 glutamyl aminopeptidase DF008_RS07200 PF01926 50S ribosome-binding GTPase DF008_RS07200 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DF008_RS07205 PF04055 Radical SAM superfamily DF008_RS07205 PF06968 Biotin and Thiamin Synthesis associated domain DF008_RS07220 PF00202 Aminotransferase class-III DF008_RS07230 PF04892 VanZ like family DF008_RS07245 PF02272 DHHA1 domain DF008_RS07245 PF01411 tRNA synthetases class II (A) DF008_RS07245 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DF008_RS07255 PF00056 lactate/malate dehydrogenase, NAD binding domain DF008_RS07255 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain DF008_RS07265 PF01625 Peptide methionine sulfoxide reductase DF008_RS07265 PF01641 SelR domain DF008_RS07270 PF01734 Patatin-like phospholipase DF008_RS07275 PF03063 Prismane/CO dehydrogenase family DF008_RS07295 PF12800 4Fe-4S binding domain DF008_RS07295 PF13247 4Fe-4S dicluster domain DF008_RS07300 PF00384 Molybdopterin oxidoreductase DF008_RS07300 PF01568 Molydopterin dinucleotide binding domain DF008_RS07300 PF04879 Molybdopterin oxidoreductase Fe4S4 domain DF008_RS07305 PF04434 SWIM zinc finger DF008_RS07305 PF00176 SNF2 family N-terminal domain DF008_RS07305 PF00271 Helicase conserved C-terminal domain DF008_RS07310 PF00561 alpha/beta hydrolase fold DF008_RS07320 PF00270 DEAD/DEAH box helicase DF008_RS07320 PF03880 DbpA RNA binding domain DF008_RS07320 PF00271 Helicase conserved C-terminal domain DF008_RS07340 PF13457 GW (Gly-Tryp) dipeptide domain DF008_RS07340 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase DF008_RS07345 PF03636 Glycosyl hydrolase family 65, N-terminal domain DF008_RS07345 PF03633 Glycosyl hydrolase family 65, C-terminal domain DF008_RS07345 PF03632 Glycosyl hydrolase family 65 central catalytic domain DF008_RS07350 PF13419 Haloacid dehalogenase-like hydrolase DF008_RS07355 PF16657 Maltogenic Amylase, C-terminal domain DF008_RS07355 PF02903 Alpha amylase, N-terminal ig-like domain DF008_RS07355 PF00128 Alpha amylase, catalytic domain DF008_RS07360 PF02811 PHP domain DF008_RS07370 PF08486 Stage II sporulation protein DF008_RS07370 PF04122 Putative cell wall binding repeat 2 DF008_RS07375 PF00480 ROK family DF008_RS07380 PF00210 Ferritin-like domain DF008_RS07385 PF00583 Acetyltransferase (GNAT) family DF008_RS07385 PF13380 CoA binding domain DF008_RS07385 PF13607 Succinyl-CoA ligase like flavodoxin domain DF008_RS07400 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DF008_RS07400 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DF008_RS07400 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DF008_RS07410 PF00155 Aminotransferase class I and II DF008_RS07425 PF00440 Bacterial regulatory proteins, tetR family DF008_RS07430 PF00756 Putative esterase DF008_RS07435 PF01594 AI-2E family transporter DF008_RS07440 PF00171 Aldehyde dehydrogenase family DF008_RS07455 PF16360 GTP-binding GTPase Middle Region DF008_RS07455 PF13167 GTP-binding GTPase N-terminal DF008_RS07455 PF01926 50S ribosome-binding GTPase DF008_RS07460 PF00664 ABC transporter transmembrane region DF008_RS07460 PF00005 ABC transporter DF008_RS07465 PF00005 ABC transporter DF008_RS07465 PF00664 ABC transporter transmembrane region DF008_RS07480 PF00484 Carbonic anhydrase DF008_RS07530 PF13302 Acetyltransferase (GNAT) domain DF008_RS07545 PF09035 Excisionase from transposon Tn916 DF008_RS07550 PF02920 DNA binding domain of tn916 integrase DF008_RS07550 PF00589 Phage integrase family DF008_RS07555 PF00132 Bacterial transferase hexapeptide (six repeats) DF008_RS07560 PF04055 Radical SAM superfamily DF008_RS07560 PF00919 Uncharacterized protein family UPF0004 DF008_RS07560 PF01938 TRAM domain DF008_RS07575 PF01226 Formate/nitrite transporter DF008_RS07580 PF13187 4Fe-4S dicluster domain DF008_RS07580 PF01077 Nitrite and sulphite reductase 4Fe-4S domain DF008_RS07580 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain DF008_RS07585 PF00175 Oxidoreductase NAD-binding domain DF008_RS07585 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DF008_RS07590 PF17179 4Fe-4S dicluster domain DF008_RS07595 PF13545 Crp-like helix-turn-helix domain DF008_RS07595 PF00027 Cyclic nucleotide-binding domain DF008_RS07600 PF01418 Helix-turn-helix domain, rpiR family DF008_RS07600 PF01380 SIS domain DF008_RS07605 PF00480 ROK family DF008_RS07620 PF00474 Sodium:solute symporter family DF008_RS07625 PF00701 Dihydrodipicolinate synthetase family DF008_RS07645 PF00360 Phytochrome region DF008_RS07645 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS07645 PF00563 EAL domain DF008_RS07645 PF01590 GAF domain DF008_RS07650 PF01336 OB-fold nucleic acid binding domain DF008_RS07650 PF00152 tRNA synthetases class II (D, K and N) DF008_RS07660 PF05922 Peptidase inhibitor I9 DF008_RS07660 PF13860 FlgD Ig-like domain DF008_RS07660 PF02225 PA domain DF008_RS07660 PF00082 Subtilase family DF008_RS07665 PF00082 Subtilase family DF008_RS07695 PF00392 Bacterial regulatory proteins, gntR family DF008_RS07695 PF00155 Aminotransferase class I and II DF008_RS07700 PF01177 Asp/Glu/Hydantoin racemase DF008_RS07720 PF07883 Cupin domain DF008_RS07725 PF00854 POT family DF008_RS07730 PF01321 Creatinase/Prolidase N-terminal domain DF008_RS07730 PF00557 Metallopeptidase family M24 DF008_RS07735 PF00854 POT family DF008_RS07755 PF00355 Rieske [2Fe-2S] domain DF008_RS07755 PF01266 FAD dependent oxidoreductase DF008_RS07760 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS07760 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS07765 PF00294 pfkB family carbohydrate kinase DF008_RS07770 PF00874 PRD domain DF008_RS07770 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS07770 PF05043 Mga helix-turn-helix domain DF008_RS07770 PF08279 HTH domain DF008_RS07775 PF13350 Tyrosine phosphatase family DF008_RS07780 PF01594 AI-2E family transporter DF008_RS07790 PF01751 Toprim domain DF008_RS07790 PF01131 DNA topoisomerase DF008_RS07795 PF01235 Sodium:alanine symporter family DF008_RS07800 PF00596 Class II Aldolase and Adducin N-terminal domain DF008_RS07805 PF00596 Class II Aldolase and Adducin N-terminal domain DF008_RS07810 PF08240 Alcohol dehydrogenase GroES-like domain DF008_RS07810 PF00107 Zinc-binding dehydrogenase DF008_RS07815 PF03611 PTS system sugar-specific permease component DF008_RS07820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS07825 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS07825 PF02378 Phosphotransferase system, EIIC DF008_RS07825 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS07830 PF03610 PTS system fructose IIA component DF008_RS07830 PF00158 Sigma-54 interaction domain DF008_RS07830 PF00874 PRD domain DF008_RS07840 PF00155 Aminotransferase class I and II DF008_RS07840 PF00392 Bacterial regulatory proteins, gntR family DF008_RS07845 PF03591 AzlC protein DF008_RS07855 PF16736 Single Cache-like DF008_RS07855 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS07855 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS07855 PF00989 PAS fold DF008_RS07860 PF00486 Transcriptional regulatory protein, C terminal DF008_RS07860 PF00072 Response regulator receiver domain DF008_RS07905 PF10548 P22AR C-terminal domain DF008_RS07905 PF02498 BRO family, N-terminal domain DF008_RS07965 PF01381 Helix-turn-helix DF008_RS07975 PF00313 'Cold-shock' DNA-binding domain DF008_RS07985 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS07990 PF08402 TOBE domain DF008_RS07990 PF00005 ABC transporter DF008_RS08005 PF00072 Response regulator receiver domain DF008_RS08005 PF00486 Transcriptional regulatory protein, C terminal DF008_RS08010 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS08010 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS08015 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DF008_RS08015 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DF008_RS08015 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DF008_RS08015 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DF008_RS08020 PF00834 Ribulose-phosphate 3 epimerase family DF008_RS08025 PF02502 Ribose/Galactose Isomerase DF008_RS08030 PF02780 Transketolase, C-terminal domain DF008_RS08030 PF02779 Transketolase, pyrimidine binding domain DF008_RS08035 PF00456 Transketolase, thiamine diphosphate binding domain DF008_RS08040 PF00107 Zinc-binding dehydrogenase DF008_RS08040 PF08240 Alcohol dehydrogenase GroES-like domain DF008_RS08045 PF00107 Zinc-binding dehydrogenase DF008_RS08045 PF08240 Alcohol dehydrogenase GroES-like domain DF008_RS08050 PF03611 PTS system sugar-specific permease component DF008_RS08055 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS08065 PF00874 PRD domain DF008_RS08065 PF03610 PTS system fructose IIA component DF008_RS08065 PF00158 Sigma-54 interaction domain DF008_RS08080 PF08125 Mannitol dehydrogenase C-terminal domain DF008_RS08080 PF01232 Mannitol dehydrogenase Rossmann domain DF008_RS08085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS08090 PF08279 HTH domain DF008_RS08090 PF05043 Mga helix-turn-helix domain DF008_RS08090 PF00874 PRD domain DF008_RS08090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS08090 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS08095 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS08095 PF02378 Phosphotransferase system, EIIC DF008_RS08100 PF00478 IMP dehydrogenase / GMP reductase domain DF008_RS08100 PF00571 CBS domain DF008_RS08105 PF05816 Toxic anion resistance protein (TelA) DF008_RS08115 PF00465 Iron-containing alcohol dehydrogenase DF008_RS08120 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DF008_RS08120 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DF008_RS08130 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal DF008_RS08130 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal DF008_RS08135 PF00171 Aldehyde dehydrogenase family DF008_RS08140 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain DF008_RS08140 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain DF008_RS08145 PF06826 Predicted Permease Membrane Region DF008_RS08145 PF02080 TrkA-C domain DF008_RS08145 PF06826 Predicted Permease Membrane Region DF008_RS08145 PF02080 TrkA-C domain DF008_RS08150 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS08150 PF03466 LysR substrate binding domain DF008_RS08160 PF01321 Creatinase/Prolidase N-terminal domain DF008_RS08160 PF00557 Metallopeptidase family M24 DF008_RS08165 PF02504 Fatty acid synthesis protein DF008_RS08170 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III DF008_RS08185 PF09338 Glycine/sarcosine/betaine reductase component B subunits DF008_RS08190 PF00085 Thioredoxin DF008_RS08195 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS08225 PF00005 ABC transporter DF008_RS08235 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS08275 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain DF008_RS08275 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain DF008_RS08280 PF00890 FAD binding domain DF008_RS08290 PF02554 Carbon starvation protein CstA DF008_RS08305 PF01594 AI-2E family transporter DF008_RS08310 PF00293 NUDIX domain DF008_RS08320 PF00871 Acetokinase family DF008_RS08340 PF02954 Bacterial regulatory protein, Fis family DF008_RS08340 PF00158 Sigma-54 interaction domain DF008_RS08340 PF13426 PAS domain DF008_RS08345 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS08350 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS08365 PF01070 FMN-dependent dehydrogenase DF008_RS08375 PF05569 BlaR1 peptidase M56 DF008_RS08375 PF00905 Penicillin binding protein transpeptidase domain DF008_RS08380 PF03965 Penicillinase repressor DF008_RS08395 PF05569 BlaR1 peptidase M56 DF008_RS08395 PF00905 Penicillin binding protein transpeptidase domain DF008_RS08400 PF03965 Penicillinase repressor DF008_RS08410 PF03484 tRNA synthetase B5 domain DF008_RS08410 PF03147 Ferredoxin-fold anticodon binding domain DF008_RS08410 PF01588 Putative tRNA binding domain DF008_RS08410 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DF008_RS08410 PF03483 B3/4 domain DF008_RS08415 PF00912 Transglycosylase DF008_RS08420 PF14579 Helix-hairpin-helix motif DF008_RS08420 PF07733 Bacterial DNA polymerase III alpha NTPase domain DF008_RS08420 PF00929 Exonuclease DF008_RS08420 PF02811 PHP domain DF008_RS08420 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DF008_RS08440 PF01171 PP-loop family DF008_RS08455 PF05067 Manganese containing catalase DF008_RS08460 PF01476 LysM domain DF008_RS08460 PF00877 NlpC/P60 family DF008_RS08460 PF08239 Bacterial SH3 domain DF008_RS08465 PF00692 dUTPase DF008_RS08470 PF01131 DNA topoisomerase DF008_RS08470 PF01751 Toprim domain DF008_RS08485 PF00873 AcrB/AcrD/AcrF family DF008_RS08500 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DF008_RS08500 PF02896 PEP-utilising enzyme, TIM barrel domain DF008_RS08500 PF00391 PEP-utilising enzyme, mobile domain DF008_RS08510 PF08279 HTH domain DF008_RS08510 PF00571 CBS domain DF008_RS08530 PF08279 HTH domain DF008_RS08530 PF05043 Mga helix-turn-helix domain DF008_RS08530 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS08530 PF00874 PRD domain DF008_RS08535 PF03612 Sorbitol phosphotransferase enzyme II N-terminus DF008_RS08535 PF07663 Sorbitol phosphotransferase enzyme II C-terminus DF008_RS08540 PF03608 PTS system enzyme II sorbitol-specific factor DF008_RS08545 PF12833 Helix-turn-helix domain DF008_RS08555 PF01546 Peptidase family M20/M25/M40 DF008_RS08555 PF07687 Peptidase dimerisation domain DF008_RS08560 PF01235 Sodium:alanine symporter family DF008_RS08565 PF07690 Major Facilitator Superfamily DF008_RS08570 PF00155 Aminotransferase class I and II DF008_RS08575 PF01515 Phosphate acetyl/butaryl transferase DF008_RS08580 PF00871 Acetokinase family DF008_RS08595 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DF008_RS08595 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DF008_RS08595 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DF008_RS08605 PF09339 IclR helix-turn-helix domain DF008_RS08605 PF01614 Bacterial transcriptional regulator DF008_RS08640 PF01769 Divalent cation transporter DF008_RS08640 PF00571 CBS domain DF008_RS08640 PF03448 MgtE intracellular N domain DF008_RS08650 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region DF008_RS08655 PF01219 Prokaryotic diacylglycerol kinase DF008_RS08665 PF02562 PhoH-like protein DF008_RS08680 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DF008_RS08680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DF008_RS08685 PF03073 TspO/MBR family DF008_RS08690 PF09424 Yqey-like protein DF008_RS08700 PF01230 HIT domain DF008_RS08705 PF01938 TRAM domain DF008_RS08705 PF04055 Radical SAM superfamily DF008_RS08705 PF00919 Uncharacterized protein family UPF0004 DF008_RS08710 PF04452 RNA methyltransferase DF008_RS08720 PF18019 HD domain DF008_RS08720 PF18395 Cas3 C-terminal domain DF008_RS08720 PF00270 DEAD/DEAH box helicase DF008_RS08745 PF03459 TOBE domain DF008_RS08745 PF17912 MalK OB fold domain DF008_RS08745 PF00005 ABC transporter DF008_RS08750 PF17853 GGDEF-like domain DF008_RS08750 PF07905 Purine catabolism regulatory protein-like family DF008_RS08750 PF13556 PucR C-terminal helix-turn-helix domain DF008_RS08755 PF07690 Major Facilitator Superfamily DF008_RS08760 PF00480 ROK family DF008_RS08790 PF04055 Radical SAM superfamily DF008_RS08790 PF06969 HemN C-terminal domain DF008_RS08795 PF13520 Amino acid permease DF008_RS08800 PF13735 tRNA nucleotidyltransferase domain 2 putative DF008_RS08800 PF12627 Probable RNA and SrmB- binding site of polymerase A DF008_RS08800 PF01743 Poly A polymerase head domain DF008_RS08820 PF03418 Germination protease DF008_RS08845 PF00753 Metallo-beta-lactamase superfamily DF008_RS08845 PF13567 Domain of unknown function (DUF4131) DF008_RS08845 PF03772 Competence protein DF008_RS08865 PF00899 ThiF family DF008_RS08875 PF06725 3D domain DF008_RS08875 PF01476 LysM domain DF008_RS08890 PF02424 ApbE family DF008_RS08895 PF00155 Aminotransferase class I and II DF008_RS08900 PF00557 Metallopeptidase family M24 DF008_RS08900 PF01321 Creatinase/Prolidase N-terminal domain DF008_RS08905 PF02378 Phosphotransferase system, EIIC DF008_RS08910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS08915 PF00391 PEP-utilising enzyme, mobile domain DF008_RS08915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS08915 PF00381 PTS HPr component phosphorylation site DF008_RS08915 PF05524 PEP-utilising enzyme, N-terminal DF008_RS08915 PF02896 PEP-utilising enzyme, TIM barrel domain DF008_RS08920 PF05043 Mga helix-turn-helix domain DF008_RS08920 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS08920 PF08279 HTH domain DF008_RS08920 PF00874 PRD domain DF008_RS08925 PF01546 Peptidase family M20/M25/M40 DF008_RS08930 PF01238 Phosphomannose isomerase type I DF008_RS08935 PF18698 Histidine kinase sensor domain DF008_RS08935 PF00989 PAS fold DF008_RS08935 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS08935 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS08935 PF00672 HAMP domain DF008_RS08940 PF09106 Elongation factor SelB, winged helix DF008_RS08940 PF09105 Elongation factor SelB, winged helix DF008_RS08940 PF00009 Elongation factor Tu GTP binding domain DF008_RS08940 PF03144 Elongation factor Tu domain 2 DF008_RS08940 PF09107 Elongation factor SelB, winged helix DF008_RS08945 PF12390 Selenocysteine synthase N terminal DF008_RS08945 PF03841 L-seryl-tRNA selenium transferase DF008_RS08960 PF00768 D-alanyl-D-alanine carboxypeptidase DF008_RS08960 PF07943 Penicillin-binding protein 5, C-terminal domain DF008_RS08985 PF00689 Cation transporting ATPase, C-terminus DF008_RS08985 PF00690 Cation transporter/ATPase, N-terminus DF008_RS08990 PF02557 D-alanyl-D-alanine carboxypeptidase DF008_RS08995 PF00440 Bacterial regulatory proteins, tetR family DF008_RS09000 PF07690 Major Facilitator Superfamily DF008_RS09010 PF02311 AraC-like ligand binding domain DF008_RS09010 PF12833 Helix-turn-helix domain DF008_RS09015 PF11975 Family 4 glycosyl hydrolase C-terminal domain DF008_RS09015 PF02056 Family 4 glycosyl hydrolase DF008_RS09020 PF00367 phosphotransferase system, EIIB DF008_RS09020 PF02378 Phosphotransferase system, EIIC DF008_RS09025 PF03123 CAT RNA binding domain DF008_RS09025 PF00874 PRD domain DF008_RS09030 PF00367 phosphotransferase system, EIIB DF008_RS09030 PF02378 Phosphotransferase system, EIIC DF008_RS09030 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS09035 PF01042 Endoribonuclease L-PSP DF008_RS09040 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS09040 PF13291 ACT domain DF008_RS09045 PF00155 Aminotransferase class I and II DF008_RS09050 PF00710 Asparaginase, N-terminal DF008_RS09050 PF17763 Glutaminase/Asparaginase C-terminal domain DF008_RS09075 PF14659 Phage integrase, N-terminal SAM-like domain DF008_RS09075 PF00589 Phage integrase family DF008_RS09100 PF01966 HD domain DF008_RS09115 PF00128 Alpha amylase, catalytic domain DF008_RS09115 PF02806 Alpha amylase, C-terminal all-beta domain DF008_RS09115 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) DF008_RS09120 PF00440 Bacterial regulatory proteins, tetR family DF008_RS09120 PF17932 Tetracyclin repressor-like, C-terminal domain DF008_RS09145 PF00266 Aminotransferase class-V DF008_RS09155 PF12704 MacB-like periplasmic core domain DF008_RS09155 PF00005 ABC transporter DF008_RS09155 PF02687 FtsX-like permease family DF008_RS09160 PF00672 HAMP domain DF008_RS09160 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS09160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS09160 PF18698 Histidine kinase sensor domain DF008_RS09165 PF00486 Transcriptional regulatory protein, C terminal DF008_RS09165 PF00072 Response regulator receiver domain DF008_RS09170 PF00149 Calcineurin-like phosphoesterase DF008_RS09170 PF02872 5'-nucleotidase, C-terminal domain DF008_RS09185 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS09185 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DF008_RS09190 PF00375 Sodium:dicarboxylate symporter family DF008_RS09200 PF03062 MBOAT, membrane-bound O-acyltransferase family DF008_RS09225 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS09230 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS09245 PF13580 SIS domain DF008_RS09250 PF03611 PTS system sugar-specific permease component DF008_RS09255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS09260 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS09270 PF01467 Cytidylyltransferase-like DF008_RS09280 PF00270 DEAD/DEAH box helicase DF008_RS09280 PF00271 Helicase conserved C-terminal domain DF008_RS09280 PF17191 RecG wedge domain DF008_RS09285 PF13684 Dihydroxyacetone kinase family DF008_RS09285 PF02734 DAK2 domain DF008_RS09290 PF03780 Asp23 family, cell envelope-related function DF008_RS09310 PF13411 MerR HTH family regulatory protein DF008_RS09310 PF07739 TipAS antibiotic-recognition domain DF008_RS09315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS09315 PF08279 HTH domain DF008_RS09315 PF05043 Mga helix-turn-helix domain DF008_RS09315 PF00874 PRD domain DF008_RS09320 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS09320 PF00874 PRD domain DF008_RS09320 PF08279 HTH domain DF008_RS09320 PF05043 Mga helix-turn-helix domain DF008_RS09325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS09335 PF07748 Glycosyl hydrolases family 38 C-terminal domain DF008_RS09335 PF09261 Alpha mannosidase middle domain DF008_RS09335 PF01074 Glycosyl hydrolases family 38 N-terminal domain DF008_RS09340 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS09340 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS09345 PF00486 Transcriptional regulatory protein, C terminal DF008_RS09345 PF00072 Response regulator receiver domain DF008_RS09360 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain DF008_RS09360 PF04263 Thiamin pyrophosphokinase, catalytic domain DF008_RS09365 PF00834 Ribulose-phosphate 3 epimerase family DF008_RS09370 PF16745 RsgA N-terminal domain DF008_RS09370 PF03193 RsgA GTPase DF008_RS09380 PF03793 PASTA domain DF008_RS09380 PF00069 Protein kinase domain DF008_RS09395 PF01189 16S rRNA methyltransferase RsmB/F DF008_RS09395 PF01029 NusB family DF008_RS09400 PF04298 Putative neutral zinc metallopeptidase DF008_RS09415 PF01327 Polypeptide deformylase DF008_RS09420 PF18074 Primosomal protein N C-terminal domain DF008_RS09420 PF18319 PriA DNA helicase Cys-rich region (CRR) domain DF008_RS09420 PF04851 Type III restriction enzyme, res subunit DF008_RS09420 PF00271 Helicase conserved C-terminal domain DF008_RS09420 PF17764 3′ DNA-binding domain (3′BD) DF008_RS09425 PF02441 Flavoprotein DF008_RS09425 PF04127 DNA / pantothenate metabolism flavoprotein DF008_RS09440 PF08340 Domain of unknown function (DUF1732) DF008_RS09440 PF03755 YicC-like family, N-terminal region DF008_RS09445 PF01678 Diaminopimelate epimerase DF008_RS09450 PF01212 Beta-eliminating lyase DF008_RS09460 PF00005 ABC transporter DF008_RS09460 PF16326 ABC transporter C-terminal domain DF008_RS09460 PF12848 ABC transporter DF008_RS09465 PF00860 Permease family DF008_RS09475 PF01479 S4 domain DF008_RS09475 PF00849 RNA pseudouridylate synthase DF008_RS09485 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain DF008_RS09485 PF01522 Polysaccharide deacetylase DF008_RS09490 PF01258 Prokaryotic dksA/traR C4-type zinc finger DF008_RS09495 PF02554 Carbon starvation protein CstA DF008_RS09500 PF00072 Response regulator receiver domain DF008_RS09500 PF04397 LytTr DNA-binding domain DF008_RS09505 PF07694 5TMR of 5TMR-LYT DF008_RS09505 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS09505 PF06580 Histidine kinase DF008_RS09510 PF00579 tRNA synthetases class I (W and Y) DF008_RS09515 PF01048 Phosphorylase superfamily DF008_RS09520 PF13520 Amino acid permease DF008_RS09525 PF01321 Creatinase/Prolidase N-terminal domain DF008_RS09525 PF00557 Metallopeptidase family M24 DF008_RS09530 PF02645 Uncharacterised protein, DegV family COG1307 DF008_RS09535 PF00440 Bacterial regulatory proteins, tetR family DF008_RS09535 PF08360 QacR-like protein, C-terminal region DF008_RS09545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DF008_RS09545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DF008_RS09550 PF00133 tRNA synthetases class I (I, L, M and V) DF008_RS09550 PF08264 Anticodon-binding domain of tRNA DF008_RS09555 PF05103 DivIVA protein DF008_RS09560 PF17774 Putative RNA-binding domain in YlmH DF008_RS09560 PF01479 S4 domain DF008_RS09575 PF01168 Alanine racemase, N-terminal domain DF008_RS09590 PF05167 Uncharacterised ACR (DUF711) DF008_RS09610 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus DF008_RS09610 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus DF008_RS09620 PF01926 50S ribosome-binding GTPase DF008_RS09620 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal DF008_RS09635 PF14045 YIEGIA protein DF008_RS09640 PF14045 YIEGIA protein DF008_RS09645 PF16736 Single Cache-like DF008_RS09645 PF00989 PAS fold DF008_RS09645 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS09645 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS09650 PF00486 Transcriptional regulatory protein, C terminal DF008_RS09650 PF00072 Response regulator receiver domain DF008_RS09665 PF05239 PRC-barrel domain DF008_RS09670 PF04542 Sigma-70 region 2 DF008_RS09670 PF04539 Sigma-70 region 3 DF008_RS09670 PF04545 Sigma-70, region 4 DF008_RS09675 PF04542 Sigma-70 region 2 DF008_RS09675 PF04545 Sigma-70, region 4 DF008_RS09680 PF03419 Sporulation factor SpoIIGA DF008_RS09690 PF12327 FtsZ family, C-terminal domain DF008_RS09690 PF00091 Tubulin/FtsZ family, GTPase domain DF008_RS09695 PF06947 Protein of unknown function (DUF1290) DF008_RS09710 PF08478 POTRA domain, FtsQ-type DF008_RS09710 PF03799 Cell division protein FtsQ DF008_RS09720 PF01098 Cell cycle protein DF008_RS09735 PF02875 Mur ligase family, glutamate ligase domain DF008_RS09735 PF08245 Mur ligase middle domain DF008_RS09735 PF01225 Mur ligase family, catalytic domain DF008_RS09740 PF03717 Penicillin-binding Protein dimerisation domain DF008_RS09740 PF00905 Penicillin binding protein transpeptidase domain DF008_RS09740 PF03793 PASTA domain DF008_RS09760 PF00675 Insulinase (Peptidase family M16) DF008_RS09760 PF05193 Peptidase M16 inactive domain DF008_RS09770 PF01926 50S ribosome-binding GTPase DF008_RS09770 PF06071 Protein of unknown function (DUF933) DF008_RS09775 PF00563 EAL domain DF008_RS09775 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS09775 PF03707 Bacterial signalling protein N terminal repeat DF008_RS09785 PF12833 Helix-turn-helix domain DF008_RS09790 PF00367 phosphotransferase system, EIIB DF008_RS09790 PF02378 Phosphotransferase system, EIIC DF008_RS09790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS09795 PF03123 CAT RNA binding domain DF008_RS09795 PF00874 PRD domain DF008_RS09800 PF00999 Sodium/hydrogen exchanger family DF008_RS09805 PF00005 ABC transporter DF008_RS09805 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DF008_RS09810 PF00005 ABC transporter DF008_RS09810 PF08352 Oligopeptide/dipeptide transporter, C-terminal region DF008_RS09815 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle DF008_RS09820 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS09825 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS09825 PF12911 N-terminal TM domain of oligopeptide transport permease C DF008_RS09830 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS09830 PF03466 LysR substrate binding domain DF008_RS09840 PF01144 Coenzyme A transferase DF008_RS09845 PF01144 Coenzyme A transferase DF008_RS09860 PF00188 Cysteine-rich secretory protein family DF008_RS09870 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase DF008_RS09870 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain DF008_RS09870 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg DF008_RS09870 PF10371 Domain of unknown function DF008_RS09870 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II DF008_RS09905 PF00269 Small, acid-soluble spore proteins, alpha/beta type DF008_RS09915 PF01569 PAP2 superfamily DF008_RS09920 PF00156 Phosphoribosyl transferase domain DF008_RS09925 PF00155 Aminotransferase class I and II DF008_RS09945 PF00155 Aminotransferase class I and II DF008_RS09950 PF07687 Peptidase dimerisation domain DF008_RS09950 PF01546 Peptidase family M20/M25/M40 DF008_RS09960 PF07670 Nucleoside recognition DF008_RS09965 PF00158 Sigma-54 interaction domain DF008_RS09965 PF13426 PAS domain DF008_RS09965 PF02954 Bacterial regulatory protein, Fis family DF008_RS09975 PF05525 Branched-chain amino acid transport protein DF008_RS09985 PF00860 Permease family DF008_RS09990 PF01979 Amidohydrolase family DF008_RS10000 PF07690 Major Facilitator Superfamily DF008_RS10005 PF08501 Shikimate dehydrogenase substrate binding domain DF008_RS10005 PF18317 Shikimate 5'-dehydrogenase C-terminal domain DF008_RS10010 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS10010 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DF008_RS10020 PF03466 LysR substrate binding domain DF008_RS10020 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS10030 PF01476 LysM domain DF008_RS10030 PF03734 L,D-transpeptidase catalytic domain DF008_RS10035 PF16363 GDP-mannose 4,6 dehydratase DF008_RS10040 PF00483 Nucleotidyl transferase DF008_RS10065 PF04203 Sortase domain DF008_RS10085 PF01522 Polysaccharide deacetylase DF008_RS10095 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS10100 PF00072 Response regulator receiver domain DF008_RS10100 PF00486 Transcriptional regulatory protein, C terminal DF008_RS10110 PF01522 Polysaccharide deacetylase DF008_RS10140 PF02583 Metal-sensitive transcriptional repressor DF008_RS10150 PF02954 Bacterial regulatory protein, Fis family DF008_RS10150 PF00158 Sigma-54 interaction domain DF008_RS10150 PF13426 PAS domain DF008_RS10155 PF00155 Aminotransferase class I and II DF008_RS10160 PF03553 Na+/H+ antiporter family DF008_RS10170 PF04122 Putative cell wall binding repeat 2 DF008_RS10170 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS10175 PF03466 LysR substrate binding domain DF008_RS10175 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS10180 PF00795 Carbon-nitrogen hydrolase DF008_RS10200 PF04055 Radical SAM superfamily DF008_RS10205 PF00753 Metallo-beta-lactamase superfamily DF008_RS10215 PF13291 ACT domain DF008_RS10215 PF04607 Region found in RelA / SpoT proteins DF008_RS10215 PF02824 TGS domain DF008_RS10225 PF10141 Single-strand DNA-specific exonuclease, C terminal domain DF008_RS10225 PF02272 DHHA1 domain DF008_RS10225 PF01368 DHH family DF008_RS10225 PF17768 RecJ OB domain DF008_RS10230 PF03109 ABC1 family DF008_RS10235 PF00132 Bacterial transferase hexapeptide (six repeats) DF008_RS10265 PF00563 EAL domain DF008_RS10265 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS10265 PF08447 PAS fold DF008_RS10265 PF08448 PAS fold DF008_RS10270 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS10275 PF05524 PEP-utilising enzyme, N-terminal DF008_RS10275 PF00391 PEP-utilising enzyme, mobile domain DF008_RS10275 PF02896 PEP-utilising enzyme, TIM barrel domain DF008_RS10280 PF00381 PTS HPr component phosphorylation site DF008_RS10290 PF07669 Eco57I restriction-modification methylase DF008_RS10290 PF12950 TaqI-like C-terminal specificity domain DF008_RS10300 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS10300 PF00563 EAL domain DF008_RS10300 PF03707 Bacterial signalling protein N terminal repeat DF008_RS10305 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS10305 PF08239 Bacterial SH3 domain DF008_RS10310 PF01255 Putative undecaprenyl diphosphate synthase DF008_RS10325 PF03816 Cell envelope-related transcriptional attenuator domain DF008_RS10330 PF03816 Cell envelope-related transcriptional attenuator domain DF008_RS10335 PF02638 Glycosyl hydrolase-like 10 DF008_RS10340 PF01476 LysM domain DF008_RS10340 PF00877 NlpC/P60 family DF008_RS10340 PF08239 Bacterial SH3 domain DF008_RS10345 PF02719 Polysaccharide biosynthesis protein DF008_RS10350 PF00534 Glycosyl transferases group 1 DF008_RS10350 PF13439 Glycosyltransferase Family 4 DF008_RS10355 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain DF008_RS10355 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain DF008_RS10355 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain DF008_RS10360 PF00535 Glycosyl transferase family 2 DF008_RS10365 PF00535 Glycosyl transferase family 2 DF008_RS10370 PF00535 Glycosyl transferase family 2 DF008_RS10375 PF00535 Glycosyl transferase family 2 DF008_RS10375 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase DF008_RS10380 PF00535 Glycosyl transferase family 2 DF008_RS10395 PF01050 Mannose-6-phosphate isomerase DF008_RS10395 PF00483 Nucleotidyl transferase DF008_RS10400 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain DF008_RS10400 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III DF008_RS10400 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II DF008_RS10400 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I DF008_RS10405 PF03023 Lipid II flippase MurJ DF008_RS10410 PF04122 Putative cell wall binding repeat 2 DF008_RS10410 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS10415 PF02397 Bacterial sugar transferase DF008_RS10420 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS10420 PF08239 Bacterial SH3 domain DF008_RS10430 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS10430 PF04122 Putative cell wall binding repeat 2 DF008_RS10440 PF04138 GtrA-like protein DF008_RS10495 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS10495 PF04122 Putative cell wall binding repeat 2 DF008_RS10510 PF02699 Preprotein translocase subunit DF008_RS10535 PF07499 RuvA, C-terminal domain DF008_RS10535 PF01330 RuvA N terminal domain DF008_RS10565 PF02447 GntP family permease DF008_RS10570 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase DF008_RS10570 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase DF008_RS10575 PF00392 Bacterial regulatory proteins, gntR family DF008_RS10575 PF07729 FCD domain DF008_RS10590 PF00664 ABC transporter transmembrane region DF008_RS10590 PF00005 ABC transporter DF008_RS10595 PF00664 ABC transporter transmembrane region DF008_RS10595 PF00005 ABC transporter DF008_RS10610 PF07670 Nucleoside recognition DF008_RS10615 PF07670 Nucleoside recognition DF008_RS10620 PF07687 Peptidase dimerisation domain DF008_RS10620 PF01546 Peptidase family M20/M25/M40 DF008_RS10640 PF00724 NADH:flavin oxidoreductase / NADH oxidase family DF008_RS10640 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS10650 PF00155 Aminotransferase class I and II DF008_RS10655 PF00892 EamA-like transporter family DF008_RS10670 PF01545 Cation efflux family DF008_RS10680 PF00690 Cation transporter/ATPase, N-terminus DF008_RS10680 PF00689 Cation transporting ATPase, C-terminus DF008_RS10685 PF00464 Serine hydroxymethyltransferase DF008_RS10690 PF03806 AbgT putative transporter family DF008_RS10705 PF00072 Response regulator receiver domain DF008_RS10705 PF08769 Sporulation initiation factor Spo0A C terminal DF008_RS10715 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DF008_RS10715 PF02403 Seryl-tRNA synthetase N-terminal domain DF008_RS10720 PF07969 Amidohydrolase family DF008_RS10725 PF00795 Carbon-nitrogen hydrolase DF008_RS10730 PF00107 Zinc-binding dehydrogenase DF008_RS10730 PF08240 Alcohol dehydrogenase GroES-like domain DF008_RS10740 PF02915 Rubrerythrin DF008_RS10745 PF13171 Protein of unknown function (DUF4004) DF008_RS10765 PF08220 DeoR-like helix-turn-helix domain DF008_RS10765 PF00455 DeoR C terminal sensor domain DF008_RS10770 PF00550 Phosphopantetheine attachment site DF008_RS10775 PF03062 MBOAT, membrane-bound O-acyltransferase family DF008_RS10780 PF00501 AMP-binding enzyme DF008_RS10780 PF13193 AMP-binding enzyme C-terminal domain DF008_RS10790 PF02894 Oxidoreductase family, C-terminal alpha/beta domain DF008_RS10790 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DF008_RS10800 PF13419 Haloacid dehalogenase-like hydrolase DF008_RS10805 PF03471 Transporter associated domain DF008_RS10805 PF00571 CBS domain DF008_RS10805 PF01595 Cyclin M transmembrane N-terminal domain DF008_RS10810 PF07969 Amidohydrolase family DF008_RS10830 PF00989 PAS fold DF008_RS10830 PF02954 Bacterial regulatory protein, Fis family DF008_RS10830 PF00158 Sigma-54 interaction domain DF008_RS10835 PF00561 alpha/beta hydrolase fold DF008_RS10835 PF08386 TAP-like protein DF008_RS10845 PF01523 Putative modulator of DNA gyrase DF008_RS10850 PF01523 Putative modulator of DNA gyrase DF008_RS10855 PF01266 FAD dependent oxidoreductase DF008_RS10860 PF00158 Sigma-54 interaction domain DF008_RS10860 PF13426 PAS domain DF008_RS10860 PF02954 Bacterial regulatory protein, Fis family DF008_RS10865 PF03812 2-keto-3-deoxygluconate permease DF008_RS10875 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DF008_RS10880 PF00563 EAL domain DF008_RS10880 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS10880 PF03707 Bacterial signalling protein N terminal repeat DF008_RS10885 PF01554 MatE DF008_RS10890 PF00005 ABC transporter DF008_RS10895 PF01032 FecCD transport family DF008_RS10900 PF01032 FecCD transport family DF008_RS10915 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DF008_RS10920 PF04794 YdjC-like protein DF008_RS10925 PF02056 Family 4 glycosyl hydrolase DF008_RS10925 PF11975 Family 4 glycosyl hydrolase C-terminal domain DF008_RS10930 PF02378 Phosphotransferase system, EIIC DF008_RS10935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS10940 PF07702 UTRA domain DF008_RS10940 PF00392 Bacterial regulatory proteins, gntR family DF008_RS10945 PF16657 Maltogenic Amylase, C-terminal domain DF008_RS10945 PF00128 Alpha amylase, catalytic domain DF008_RS10950 PF02378 Phosphotransferase system, EIIC DF008_RS10950 PF00367 phosphotransferase system, EIIB DF008_RS10960 PF07702 UTRA domain DF008_RS10960 PF00392 Bacterial regulatory proteins, gntR family DF008_RS10965 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS10970 PF00005 ABC transporter DF008_RS10970 PF08402 TOBE domain DF008_RS10995 PF01990 ATP synthase (F/14-kDa) subunit DF008_RS11010 PF00137 ATP synthase subunit C DF008_RS11015 PF01496 V-type ATPase 116kDa subunit family DF008_RS11040 PF03707 Bacterial signalling protein N terminal repeat DF008_RS11040 PF00563 EAL domain DF008_RS11040 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS11045 PF00465 Iron-containing alcohol dehydrogenase DF008_RS11045 PF00171 Aldehyde dehydrogenase family DF008_RS11055 PF02441 Flavoprotein DF008_RS11065 PF13193 AMP-binding enzyme C-terminal domain DF008_RS11065 PF00501 AMP-binding enzyme DF008_RS11070 PF00108 Thiolase, N-terminal domain DF008_RS11070 PF02803 Thiolase, C-terminal domain DF008_RS11075 PF02632 BioY family DF008_RS11090 PF09827 CRISPR associated protein Cas2 DF008_RS11095 PF01867 CRISPR associated protein Cas1 DF008_RS11105 PF18019 HD domain DF008_RS11105 PF00270 DEAD/DEAH box helicase DF008_RS11105 PF00271 Helicase conserved C-terminal domain DF008_RS11135 PF02687 FtsX-like permease family DF008_RS11140 PF00005 ABC transporter DF008_RS11150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS11155 PF00486 Transcriptional regulatory protein, C terminal DF008_RS11155 PF00072 Response regulator receiver domain DF008_RS11165 PF00005 ABC transporter DF008_RS11170 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS11185 PF00268 Ribonucleotide reductase, small chain DF008_RS11190 PF00317 Ribonucleotide reductase, all-alpha domain DF008_RS11190 PF02867 Ribonucleotide reductase, barrel domain DF008_RS11190 PF08343 Ribonucleotide reductase N-terminal DF008_RS11200 PF00005 ABC transporter DF008_RS11205 PF01032 FecCD transport family DF008_RS11225 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS11230 PF00072 Response regulator receiver domain DF008_RS11230 PF00486 Transcriptional regulatory protein, C terminal DF008_RS11235 PF02687 FtsX-like permease family DF008_RS11240 PF00005 ABC transporter DF008_RS11255 PF00701 Dihydrodipicolinate synthetase family DF008_RS11260 PF01557 Fumarylacetoacetate (FAA) hydrolase family DF008_RS11265 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus DF008_RS11275 PF03812 2-keto-3-deoxygluconate permease DF008_RS11285 PF00465 Iron-containing alcohol dehydrogenase DF008_RS11290 PF03734 L,D-transpeptidase catalytic domain DF008_RS11300 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DF008_RS11300 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS11305 PF02683 Cytochrome C biogenesis protein transmembrane region DF008_RS11310 PF01638 HxlR-like helix-turn-helix DF008_RS11315 PF09261 Alpha mannosidase middle domain DF008_RS11315 PF01074 Glycosyl hydrolases family 38 N-terminal domain DF008_RS11315 PF07748 Glycosyl hydrolases family 38 C-terminal domain DF008_RS11325 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS11330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS11330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS11335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS11335 PF00874 PRD domain DF008_RS11335 PF08279 HTH domain DF008_RS11335 PF05043 Mga helix-turn-helix domain DF008_RS11340 PF06800 Sugar transport protein DF008_RS11375 PF08331 Domain of unknown function (DUF1730) DF008_RS11385 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11390 PF00571 CBS domain DF008_RS11390 PF01380 SIS domain DF008_RS11395 PF00155 Aminotransferase class I and II DF008_RS11400 PF02378 Phosphotransferase system, EIIC DF008_RS11400 PF00367 phosphotransferase system, EIIB DF008_RS11405 PF03123 CAT RNA binding domain DF008_RS11405 PF00874 PRD domain DF008_RS11410 PF00266 Aminotransferase class-V DF008_RS11415 PF00085 Thioredoxin DF008_RS11425 PF02567 Phenazine biosynthesis-like protein DF008_RS11430 PF00854 POT family DF008_RS11445 PF02861 Clp amino terminal domain, pathogenicity island component DF008_RS11445 PF17871 AAA lid domain DF008_RS11445 PF10431 C-terminal, D2-small domain, of ClpB protein DF008_RS11445 PF07724 AAA domain (Cdc48 subfamily) DF008_RS11445 PF00004 ATPase family associated with various cellular activities (AAA) DF008_RS11470 PF01418 Helix-turn-helix domain, rpiR family DF008_RS11470 PF01380 SIS domain DF008_RS11475 PF01869 BadF/BadG/BcrA/BcrD ATPase family DF008_RS11490 PF02378 Phosphotransferase system, EIIC DF008_RS11510 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS11515 PF00072 Response regulator receiver domain DF008_RS11515 PF00486 Transcriptional regulatory protein, C terminal DF008_RS11525 PF00005 ABC transporter DF008_RS11535 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11545 PF11975 Family 4 glycosyl hydrolase C-terminal domain DF008_RS11545 PF02056 Family 4 glycosyl hydrolase DF008_RS11550 PF02378 Phosphotransferase system, EIIC DF008_RS11550 PF00367 phosphotransferase system, EIIB DF008_RS11565 PF01261 Xylose isomerase-like TIM barrel DF008_RS11570 PF00370 FGGY family of carbohydrate kinases, N-terminal domain DF008_RS11570 PF02782 FGGY family of carbohydrate kinases, C-terminal domain DF008_RS11575 PF00480 ROK family DF008_RS11585 PF03830 PTS system sorbose subfamily IIB component DF008_RS11585 PF03610 PTS system fructose IIA component DF008_RS11590 PF03613 PTS system mannose/fructose/sorbose family IID component DF008_RS11595 PF03609 PTS system sorbose-specific iic component DF008_RS11620 PF04851 Type III restriction enzyme, res subunit DF008_RS11620 PF08463 EcoEI R protein C-terminal DF008_RS11620 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) DF008_RS11620 PF00271 Helicase conserved C-terminal domain DF008_RS11640 PF01420 Type I restriction modification DNA specificity domain DF008_RS11645 PF02384 N-6 DNA Methylase DF008_RS11650 PF01116 Fructose-bisphosphate aldolase class-II DF008_RS11655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS11655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS11655 PF02378 Phosphotransferase system, EIIC DF008_RS11660 PF00294 pfkB family carbohydrate kinase DF008_RS11670 PF00232 Glycosyl hydrolase family 1 DF008_RS11680 PF02378 Phosphotransferase system, EIIC DF008_RS11690 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS11690 PF02378 Phosphotransferase system, EIIC DF008_RS11690 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS11695 PF02595 Glycerate kinase family DF008_RS11700 PF09261 Alpha mannosidase middle domain DF008_RS11700 PF07748 Glycosyl hydrolases family 38 C-terminal domain DF008_RS11700 PF01074 Glycosyl hydrolases family 38 N-terminal domain DF008_RS11705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS11705 PF02378 Phosphotransferase system, EIIC DF008_RS11705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS11710 PF01418 Helix-turn-helix domain, rpiR family DF008_RS11710 PF01380 SIS domain DF008_RS11715 PF04794 YdjC-like protein DF008_RS11720 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11720 PF02378 Phosphotransferase system, EIIC DF008_RS11720 PF00367 phosphotransferase system, EIIB DF008_RS11730 PF00128 Alpha amylase, catalytic domain DF008_RS11730 PF16657 Maltogenic Amylase, C-terminal domain DF008_RS11735 PF13520 Amino acid permease DF008_RS11740 PF07722 Peptidase C26 DF008_RS11745 PF00158 Sigma-54 interaction domain DF008_RS11745 PF13426 PAS domain DF008_RS11745 PF02954 Bacterial regulatory protein, Fis family DF008_RS11755 PF00232 Glycosyl hydrolase family 1 DF008_RS11760 PF00232 Glycosyl hydrolase family 1 DF008_RS11765 PF00367 phosphotransferase system, EIIB DF008_RS11765 PF02378 Phosphotransferase system, EIIC DF008_RS11765 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11770 PF03123 CAT RNA binding domain DF008_RS11770 PF00874 PRD domain DF008_RS11780 PF03606 C4-dicarboxylate anaerobic carrier DF008_RS11785 PF00367 phosphotransferase system, EIIB DF008_RS11785 PF02378 Phosphotransferase system, EIIC DF008_RS11790 PF01546 Peptidase family M20/M25/M40 DF008_RS11795 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11810 PF12323 Helix-turn-helix domain DF008_RS11810 PF07282 Putative transposase DNA-binding domain DF008_RS11810 PF01385 Probable transposase DF008_RS11825 PF00923 Transaldolase/Fructose-6-phosphate aldolase DF008_RS11830 PF05043 Mga helix-turn-helix domain DF008_RS11830 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS11830 PF00874 PRD domain DF008_RS11830 PF08279 HTH domain DF008_RS11835 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 DF008_RS11835 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) DF008_RS11840 PF00834 Ribulose-phosphate 3 epimerase family DF008_RS11845 PF00365 Phosphofructokinase DF008_RS11855 PF01546 Peptidase family M20/M25/M40 DF008_RS11855 PF07687 Peptidase dimerisation domain DF008_RS11860 PF01546 Peptidase family M20/M25/M40 DF008_RS11870 PF00232 Glycosyl hydrolase family 1 DF008_RS11875 PF00367 phosphotransferase system, EIIB DF008_RS11875 PF02378 Phosphotransferase system, EIIC DF008_RS11875 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11890 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase DF008_RS11895 PF01381 Helix-turn-helix DF008_RS11910 PF01022 Bacterial regulatory protein, arsR family DF008_RS11915 PF00881 Nitroreductase family DF008_RS11920 PF00232 Glycosyl hydrolase family 1 DF008_RS11925 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS11925 PF02378 Phosphotransferase system, EIIC DF008_RS11925 PF00367 phosphotransferase system, EIIB DF008_RS11930 PF00874 PRD domain DF008_RS11930 PF03123 CAT RNA binding domain DF008_RS11940 PF02687 FtsX-like permease family DF008_RS11940 PF00005 ABC transporter DF008_RS11940 PF12704 MacB-like periplasmic core domain DF008_RS11945 PF00005 ABC transporter DF008_RS11945 PF00664 ABC transporter transmembrane region DF008_RS11985 PF02195 ParB-like nuclease domain DF008_RS11985 PF17762 HTH domain found in ParB protein DF008_RS11990 PF02378 Phosphotransferase system, EIIC DF008_RS11990 PF00367 phosphotransferase system, EIIB DF008_RS11995 PF13419 Haloacid dehalogenase-like hydrolase DF008_RS12000 PF03633 Glycosyl hydrolase family 65, C-terminal domain DF008_RS12000 PF03632 Glycosyl hydrolase family 65 central catalytic domain DF008_RS12000 PF03636 Glycosyl hydrolase family 65, N-terminal domain DF008_RS12005 PF00232 Glycosyl hydrolase family 1 DF008_RS12010 PF12833 Helix-turn-helix domain DF008_RS12015 PF02378 Phosphotransferase system, EIIC DF008_RS12015 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS12015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS12020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS12020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS12020 PF00874 PRD domain DF008_RS12020 PF05043 Mga helix-turn-helix domain DF008_RS12020 PF08279 HTH domain DF008_RS12025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS12025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS12030 PF01116 Fructose-bisphosphate aldolase class-II DF008_RS12050 PF01965 DJ-1/PfpI family DF008_RS12065 PF04203 Sortase domain DF008_RS12080 PF01555 DNA methylase DF008_RS12085 PF02086 D12 class N6 adenine-specific DNA methyltransferase DF008_RS12090 PF13408 Recombinase zinc beta ribbon domain DF008_RS12090 PF07508 Recombinase DF008_RS12090 PF00239 Resolvase, N terminal domain DF008_RS12155 PF00005 ABC transporter DF008_RS12155 PF13732 Domain of unknown function (DUF4162) DF008_RS12165 PF00575 S1 RNA binding domain DF008_RS12165 PF00773 RNB domain DF008_RS12165 PF17876 Cold shock domain DF008_RS12165 PF08206 Ribonuclease B OB domain DF008_RS12180 PF01161 Phosphatidylethanolamine-binding protein DF008_RS12210 PF00121 Triosephosphate isomerase DF008_RS12220 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain DF008_RS12220 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain DF008_RS12225 PF04198 Putative sugar-binding domain DF008_RS12230 PF04552 Sigma-54, DNA binding domain DF008_RS12230 PF04963 Sigma-54 factor, core binding domain DF008_RS12230 PF00309 Sigma-54 factor, Activator interacting domain (AID) DF008_RS12235 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain DF008_RS12235 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase DF008_RS12240 PF01979 Amidohydrolase family DF008_RS12245 PF01180 Dihydroorotate dehydrogenase DF008_RS12250 PF00860 Permease family DF008_RS12255 PF01979 Amidohydrolase family DF008_RS12260 PF07969 Amidohydrolase family DF008_RS12265 PF01546 Peptidase family M20/M25/M40 DF008_RS12265 PF07687 Peptidase dimerisation domain DF008_RS12270 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS12285 PF01042 Endoribonuclease L-PSP DF008_RS12300 PF02525 Flavodoxin-like fold DF008_RS12305 PF13411 MerR HTH family regulatory protein DF008_RS12315 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS12315 PF04122 Putative cell wall binding repeat 2 DF008_RS12320 PF00005 ABC transporter DF008_RS12325 PF02687 FtsX-like permease family DF008_RS12335 PF00072 Response regulator receiver domain DF008_RS12335 PF00196 Bacterial regulatory proteins, luxR family DF008_RS12345 PF12833 Helix-turn-helix domain DF008_RS12350 PF17760 UvrA interaction domain DF008_RS12350 PF17755 UvrA DNA-binding domain DF008_RS12350 PF00005 ABC transporter DF008_RS12360 PF13411 MerR HTH family regulatory protein DF008_RS12365 PF07690 Major Facilitator Superfamily DF008_RS12380 PF00005 ABC transporter DF008_RS12385 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS12385 PF00672 HAMP domain DF008_RS12385 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS12390 PF00486 Transcriptional regulatory protein, C terminal DF008_RS12390 PF00072 Response regulator receiver domain DF008_RS12395 PF02096 60Kd inner membrane protein DF008_RS12400 PF00881 Nitroreductase family DF008_RS12410 PF01554 MatE DF008_RS12435 PF13649 Methyltransferase domain DF008_RS12445 PF12833 Helix-turn-helix domain DF008_RS12450 PF00571 CBS domain DF008_RS12450 PF00005 ABC transporter DF008_RS12455 PF04069 Substrate binding domain of ABC-type glycine betaine transport system DF008_RS12460 PF17755 UvrA DNA-binding domain DF008_RS12460 PF17760 UvrA interaction domain DF008_RS12460 PF00005 ABC transporter DF008_RS12475 PF13649 Methyltransferase domain DF008_RS12485 PF07687 Peptidase dimerisation domain DF008_RS12485 PF01546 Peptidase family M20/M25/M40 DF008_RS12490 PF03313 Serine dehydratase alpha chain DF008_RS12490 PF03315 Serine dehydratase beta chain DF008_RS12495 PF00701 Dihydrodipicolinate synthetase family DF008_RS12500 PF01118 Semialdehyde dehydrogenase, NAD binding domain DF008_RS12500 PF02774 Semialdehyde dehydrogenase, dimerisation domain DF008_RS12510 PF01113 Dihydrodipicolinate reductase, N-terminus DF008_RS12510 PF05173 Dihydrodipicolinate reductase, C-terminus DF008_RS12525 PF01113 Dihydrodipicolinate reductase, N-terminus DF008_RS12525 PF05173 Dihydrodipicolinate reductase, C-terminus DF008_RS12550 PF01209 ubiE/COQ5 methyltransferase family DF008_RS12565 PF05544 Proline racemase DF008_RS12575 PF09338 Glycine/sarcosine/betaine reductase component B subunits DF008_RS12580 PF09338 Glycine/sarcosine/betaine reductase component B subunits DF008_RS12595 PF09338 Glycine/sarcosine/betaine reductase component B subunits DF008_RS12600 PF02954 Bacterial regulatory protein, Fis family DF008_RS12600 PF13426 PAS domain DF008_RS12600 PF00158 Sigma-54 interaction domain DF008_RS12610 PF10531 SLBB domain DF008_RS12610 PF13237 4Fe-4S dicluster domain DF008_RS12610 PF13375 RnfC Barrel sandwich hybrid domain DF008_RS12610 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DF008_RS12620 PF01522 Polysaccharide deacetylase DF008_RS12625 PF00269 Small, acid-soluble spore proteins, alpha/beta type DF008_RS12645 PF08245 Mur ligase middle domain DF008_RS12655 PF04397 LytTr DNA-binding domain DF008_RS12655 PF00072 Response regulator receiver domain DF008_RS12660 PF10458 Valyl tRNA synthetase tRNA binding arm DF008_RS12660 PF00133 tRNA synthetases class I (I, L, M and V) DF008_RS12660 PF08264 Anticodon-binding domain of tRNA DF008_RS12665 PF01522 Polysaccharide deacetylase DF008_RS12680 PF01895 PhoU domain DF008_RS12690 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS12695 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS12705 PF00072 Response regulator receiver domain DF008_RS12705 PF00486 Transcriptional regulatory protein, C terminal DF008_RS12710 PF00672 HAMP domain DF008_RS12710 PF18698 Histidine kinase sensor domain DF008_RS12710 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS12715 PF00072 Response regulator receiver domain DF008_RS12715 PF00486 Transcriptional regulatory protein, C terminal DF008_RS12720 PF12849 PBP superfamily domain DF008_RS12725 PF08439 Oligopeptidase F DF008_RS12725 PF01432 Peptidase family M3 DF008_RS12730 PF02308 MgtC family DF008_RS12750 PF07670 Nucleoside recognition DF008_RS12750 PF07664 Ferrous iron transport protein B C terminus DF008_RS12750 PF17910 FeoB cytosolic helical domain DF008_RS12750 PF02421 Ferrous iron transport protein B DF008_RS12755 PF13580 SIS domain DF008_RS12760 PF03613 PTS system mannose/fructose/sorbose family IID component DF008_RS12765 PF03609 PTS system sorbose-specific iic component DF008_RS12770 PF03830 PTS system sorbose subfamily IIB component DF008_RS12770 PF03610 PTS system fructose IIA component DF008_RS12775 PF03610 PTS system fructose IIA component DF008_RS12775 PF03830 PTS system sorbose subfamily IIB component DF008_RS12780 PF00158 Sigma-54 interaction domain DF008_RS12780 PF00874 PRD domain DF008_RS12785 PF03807 NADP oxidoreductase coenzyme F420-dependent DF008_RS12785 PF14748 Pyrroline-5-carboxylate reductase dimerisation DF008_RS12790 PF01228 Glycine radical DF008_RS12790 PF02901 Pyruvate formate lyase-like DF008_RS12795 PF04055 Radical SAM superfamily DF008_RS12800 PF13180 PDZ domain DF008_RS12810 PF02690 Na+/Pi-cotransporter DF008_RS12830 PF02810 SEC-C motif DF008_RS12830 PF05225 helix-turn-helix, Psq domain DF008_RS12850 PF00114 Pilin (bacterial filament) DF008_RS12850 PF07963 Prokaryotic N-terminal methylation motif DF008_RS12855 PF00482 Type II secretion system (T2SS), protein F DF008_RS12860 PF00437 Type II/IV secretion system protein DF008_RS12895 PF02417 Chromate transporter DF008_RS12905 PF00574 Clp protease DF008_RS12920 PF01138 3' exoribonuclease family, domain 1 DF008_RS12920 PF03725 3' exoribonuclease family, domain 2 DF008_RS12945 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS12945 PF13247 4Fe-4S dicluster domain DF008_RS12945 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster DF008_RS12950 PF02256 Iron hydrogenase small subunit DF008_RS12950 PF00037 4Fe-4S binding domain DF008_RS12950 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DF008_RS12950 PF02906 Iron only hydrogenase large subunit, C-terminal domain DF008_RS12955 PF13247 4Fe-4S dicluster domain DF008_RS12955 PF12800 4Fe-4S binding domain DF008_RS12965 PF02634 FdhD/NarQ family DF008_RS12980 PF00072 Response regulator receiver domain DF008_RS12980 PF00486 Transcriptional regulatory protein, C terminal DF008_RS13015 PF00535 Glycosyl transferase family 2 DF008_RS13015 PF13181 Tetratricopeptide repeat DF008_RS13020 PF00574 Clp protease DF008_RS13025 PF12833 Helix-turn-helix domain DF008_RS13030 PF00392 Bacterial regulatory proteins, gntR family DF008_RS13030 PF00155 Aminotransferase class I and II DF008_RS13040 PF00881 Nitroreductase family DF008_RS13045 PF01638 HxlR-like helix-turn-helix DF008_RS13050 PF01965 DJ-1/PfpI family DF008_RS13055 PF01037 Lrp/AsnC ligand binding domain DF008_RS13060 PF00005 ABC transporter DF008_RS13060 PF12848 ABC transporter DF008_RS13065 PF00072 Response regulator receiver domain DF008_RS13065 PF00486 Transcriptional regulatory protein, C terminal DF008_RS13085 PF00005 ABC transporter DF008_RS13090 PF00563 EAL domain DF008_RS13090 PF13426 PAS domain DF008_RS13090 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS13105 PF03193 RsgA GTPase DF008_RS13125 PF05958 tRNA (Uracil-5-)-methyltransferase DF008_RS13125 PF01938 TRAM domain DF008_RS13130 PF02887 Pyruvate kinase, alpha/beta domain DF008_RS13130 PF00224 Pyruvate kinase, barrel domain DF008_RS13130 PF00391 PEP-utilising enzyme, mobile domain DF008_RS13140 PF01336 OB-fold nucleic acid binding domain DF008_RS13140 PF07733 Bacterial DNA polymerase III alpha NTPase domain DF008_RS13140 PF17657 Bacterial DNA polymerase III alpha subunit finger domain DF008_RS13140 PF14579 Helix-hairpin-helix motif DF008_RS13140 PF02811 PHP domain DF008_RS13150 PF00293 NUDIX domain DF008_RS13155 PF01933 Uncharacterised protein family UPF0052 DF008_RS13165 PF02811 PHP domain DF008_RS13175 PF01226 Formate/nitrite transporter DF008_RS13180 PF13091 PLD-like domain DF008_RS13180 PF13396 Phospholipase_D-nuclease N-terminal DF008_RS13190 PF00037 4Fe-4S binding domain DF008_RS13190 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region DF008_RS13190 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit DF008_RS13195 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region DF008_RS13195 PF00037 4Fe-4S binding domain DF008_RS13195 PF02256 Iron hydrogenase small subunit DF008_RS13195 PF02906 Iron only hydrogenase large subunit, C-terminal domain DF008_RS13200 PF05188 MutS domain II DF008_RS13200 PF00488 MutS domain V DF008_RS13200 PF05192 MutS domain III DF008_RS13200 PF01624 MutS domain I DF008_RS13200 PF05190 MutS family domain IV DF008_RS13205 PF02603 HPr Serine kinase N terminus DF008_RS13205 PF07475 HPr Serine kinase C-terminal domain DF008_RS13215 PF17760 UvrA interaction domain DF008_RS13215 PF17755 UvrA DNA-binding domain DF008_RS13220 PF17757 UvrB interaction domain DF008_RS13220 PF12344 Ultra-violet resistance protein B DF008_RS13220 PF02151 UvrB/uvrC motif DF008_RS13220 PF00271 Helicase conserved C-terminal domain DF008_RS13220 PF04851 Type III restriction enzyme, res subunit DF008_RS13230 PF13416 Bacterial extracellular solute-binding protein DF008_RS13235 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS13240 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS13245 PF03459 TOBE domain DF008_RS13245 PF17912 MalK OB fold domain DF008_RS13245 PF00005 ABC transporter DF008_RS13265 PF10414 Sirohaem synthase dimerisation region DF008_RS13265 PF14824 Sirohaem biosynthesis protein central DF008_RS13265 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DF008_RS13270 PF00490 Delta-aminolevulinic acid dehydratase DF008_RS13285 PF06180 Cobalt chelatase (CbiK) DF008_RS13290 PF02571 Precorrin-6x reductase CbiJ/CobK DF008_RS13295 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DF008_RS13300 PF01890 Cobalamin synthesis G C-terminus DF008_RS13300 PF11761 Cobalamin biosynthesis central region DF008_RS13300 PF11760 Cobalamin synthesis G N-terminal DF008_RS13305 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DF008_RS13310 PF05175 Methyltransferase small domain DF008_RS13315 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DF008_RS13325 PF02570 Precorrin-8X methylmutase DF008_RS13330 PF00288 GHMP kinases N terminal domain DF008_RS13335 PF00155 Aminotransferase class I and II DF008_RS13340 PF03186 CobD/Cbib protein DF008_RS13345 PF07685 CobB/CobQ-like glutamine amidotransferase domain DF008_RS13345 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain DF008_RS13355 PF00300 Histidine phosphatase superfamily (branch 1) DF008_RS13365 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase DF008_RS13390 PF00155 Aminotransferase class I and II DF008_RS13395 PF01321 Creatinase/Prolidase N-terminal domain DF008_RS13395 PF00557 Metallopeptidase family M24 DF008_RS13400 PF02378 Phosphotransferase system, EIIC DF008_RS13400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS13405 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS13410 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DF008_RS13415 PF05343 M42 glutamyl aminopeptidase DF008_RS13420 PF00874 PRD domain DF008_RS13420 PF03123 CAT RNA binding domain DF008_RS13425 PF01116 Fructose-bisphosphate aldolase class-II DF008_RS13430 PF01380 SIS domain DF008_RS13435 PF01408 Oxidoreductase family, NAD-binding Rossmann fold DF008_RS13440 PF00294 pfkB family carbohydrate kinase DF008_RS13450 PF01979 Amidohydrolase family DF008_RS13465 PF01471 Putative peptidoglycan binding domain DF008_RS13465 PF17820 PDZ domain DF008_RS13465 PF03572 Peptidase family S41 DF008_RS13470 PF01812 5-formyltetrahydrofolate cyclo-ligase family DF008_RS13485 PF02780 Transketolase, C-terminal domain DF008_RS13485 PF02779 Transketolase, pyrimidine binding domain DF008_RS13490 PF00456 Transketolase, thiamine diphosphate binding domain DF008_RS13495 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system DF008_RS13505 PF01168 Alanine racemase, N-terminal domain DF008_RS13505 PF00842 Alanine racemase, C-terminal domain DF008_RS13515 PF00571 CBS domain DF008_RS13515 PF00478 IMP dehydrogenase / GMP reductase domain DF008_RS13520 PF01648 4'-phosphopantetheinyl transferase superfamily DF008_RS13525 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain DF008_RS13525 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain DF008_RS13535 PF00231 ATP synthase DF008_RS13560 PF00119 ATP synthase A chain DF008_RS13580 PF02625 XdhC and CoxI family DF008_RS13580 PF13478 XdhC Rossmann domain DF008_RS13590 PF02502 Ribose/Galactose Isomerase DF008_RS13595 PF01451 Low molecular weight phosphotyrosine protein phosphatase DF008_RS13600 PF03481 Putative GTP-binding controlling metal-binding DF008_RS13600 PF01300 Telomere recombination DF008_RS13615 PF17827 PrmC N-terminal domain DF008_RS13615 PF05175 Methyltransferase small domain DF008_RS13620 PF07136 Protein of unknown function (DUF1385) DF008_RS13630 PF07498 Rho termination factor, N-terminal domain DF008_RS13630 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DF008_RS13630 PF07497 Rho termination factor, RNA-binding domain DF008_RS13635 PF00483 Nucleotidyl transferase DF008_RS13640 PF08439 Oligopeptidase F DF008_RS13640 PF01432 Peptidase family M3 DF008_RS13645 PF07228 Stage II sporulation protein E (SpoIIE) DF008_RS13650 PF02541 Ppx/GppA phosphatase family DF008_RS13670 PF01479 S4 domain DF008_RS13675 PF00216 Bacterial DNA-binding protein DF008_RS13680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DF008_RS13680 PF03819 MazG nucleotide pyrophosphohydrolase domain DF008_RS13685 PF14667 Polysaccharide biosynthesis C-terminal domain DF008_RS13685 PF01943 Polysaccharide biosynthesis protein DF008_RS13690 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin DF008_RS13690 PF15714 Stage V sporulation protein T C-terminal, transcription factor DF008_RS13695 PF05698 Bacterial trigger factor protein (TF) C-terminus DF008_RS13700 PF02559 CarD-like/TRCF domain DF008_RS13700 PF17757 UvrB interaction domain DF008_RS13700 PF00270 DEAD/DEAH box helicase DF008_RS13700 PF00271 Helicase conserved C-terminal domain DF008_RS13700 PF03461 TRCF domain DF008_RS13715 PF01478 Type IV leader peptidase family DF008_RS13715 PF06750 Bacterial Peptidase A24 N-terminal domain DF008_RS13720 PF00437 Type II/IV secretion system protein DF008_RS13750 PF00482 Type II secretion system (T2SS), protein F DF008_RS13755 PF00437 Type II/IV secretion system protein DF008_RS13765 PF14572 Phosphoribosyl synthetase-associated domain DF008_RS13765 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase DF008_RS13780 PF09182 Bacterial purine repressor, N-terminal DF008_RS13780 PF00156 Phosphoribosyl transferase domain DF008_RS13795 PF01545 Cation efflux family DF008_RS13795 PF16916 Dimerisation domain of Zinc Transporter DF008_RS13800 PF01546 Peptidase family M20/M25/M40 DF008_RS13800 PF07687 Peptidase dimerisation domain DF008_RS13815 PF13331 Domain of unknown function (DUF4093) DF008_RS13815 PF01751 Toprim domain DF008_RS13825 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS13830 PF00005 ABC transporter DF008_RS13840 PF00528 Binding-protein-dependent transport system inner membrane component DF008_RS13845 PF00005 ABC transporter DF008_RS13850 PF02811 PHP domain DF008_RS13855 PF07969 Amidohydrolase family DF008_RS13860 PF00005 ABC transporter DF008_RS13865 PF00005 ABC transporter DF008_RS13870 PF06007 Phosphonate metabolism protein PhnJ DF008_RS13875 PF05861 Bacterial phosphonate metabolism protein (PhnI) DF008_RS13890 PF01026 TatD related DNase DF008_RS13895 PF08264 Anticodon-binding domain of tRNA DF008_RS13895 PF09334 tRNA synthetases class I (M) DF008_RS13895 PF01588 Putative tRNA binding domain DF008_RS13900 PF07670 Nucleoside recognition DF008_RS13910 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain DF008_RS13910 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain DF008_RS13910 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family DF008_RS13915 PF01037 Lrp/AsnC ligand binding domain DF008_RS13925 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases DF008_RS13930 PF05175 Methyltransferase small domain DF008_RS13935 PF04468 PSP1 C-terminal conserved region DF008_RS13940 PF09115 DNA polymerase III, delta subunit, C terminal DF008_RS13945 PF02223 Thymidylate kinase DF008_RS13950 PF01276 Orn/Lys/Arg decarboxylase, major domain DF008_RS13950 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain DF008_RS13955 PF04070 Domain of unknown function (DUF378) DF008_RS13980 PF00152 tRNA synthetases class II (D, K and N) DF008_RS13980 PF01336 OB-fold nucleic acid binding domain DF008_RS13990 PF01207 Dihydrouridine synthase (Dus) DF008_RS14005 PF03576 Peptidase family S58 DF008_RS14010 PF03099 Biotin/lipoate A/B protein ligase family DF008_RS14010 PF02237 Biotin protein ligase C terminal domain DF008_RS14010 PF08279 HTH domain DF008_RS14015 PF01434 Peptidase family M41 DF008_RS14015 PF00004 ATPase family associated with various cellular activities (AAA) DF008_RS14015 PF17862 AAA+ lid domain DF008_RS14030 PF01177 Asp/Glu/Hydantoin racemase DF008_RS14035 PF07486 Cell Wall Hydrolase DF008_RS14035 PF01471 Putative peptidoglycan binding domain DF008_RS14040 PF09551 Stage II sporulation protein R (spore_II_R) DF008_RS14045 PF00392 Bacterial regulatory proteins, gntR family DF008_RS14045 PF07729 FCD domain DF008_RS14065 PF05582 YabG peptidase U57 DF008_RS14080 PF02810 SEC-C motif DF008_RS14080 PF07516 SecA Wing and Scaffold domain DF008_RS14080 PF01043 SecA preprotein cross-linking domain DF008_RS14080 PF07517 SecA DEAD-like domain DF008_RS14105 PF07690 Major Facilitator Superfamily DF008_RS14110 PF01053 Cys/Met metabolism PLP-dependent enzyme DF008_RS14115 PF00239 Resolvase, N terminal domain DF008_RS14115 PF02796 Helix-turn-helix domain of resolvase DF008_RS14130 PF10672 S-adenosylmethionine-dependent methyltransferase DF008_RS14135 PF01479 S4 domain DF008_RS14135 PF00849 RNA pseudouridylate synthase DF008_RS14140 PF13411 MerR HTH family regulatory protein DF008_RS14140 PF06445 GyrI-like small molecule binding domain DF008_RS14150 PF12704 MacB-like periplasmic core domain DF008_RS14150 PF02687 FtsX-like permease family DF008_RS14150 PF00005 ABC transporter DF008_RS14155 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS14155 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS14160 PF00486 Transcriptional regulatory protein, C terminal DF008_RS14160 PF00072 Response regulator receiver domain DF008_RS14165 PF02142 MGS-like domain DF008_RS14165 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DF008_RS14165 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DF008_RS14170 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DF008_RS14170 PF00117 Glutamine amidotransferase class-I DF008_RS14175 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DF008_RS14175 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain DF008_RS14175 PF02142 MGS-like domain DF008_RS14180 PF00117 Glutamine amidotransferase class-I DF008_RS14180 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain DF008_RS14185 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family DF008_RS14200 PF02073 Thermophilic metalloprotease (M29) DF008_RS14205 PF02574 Homocysteine S-methyltransferase DF008_RS14205 PF00809 Pterin binding enzyme DF008_RS14205 PF02965 Vitamin B12 dependent methionine synthase, activation domain DF008_RS14205 PF02607 B12 binding domain DF008_RS14205 PF02310 B12 binding domain DF008_RS14220 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS14220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS14225 PF00486 Transcriptional regulatory protein, C terminal DF008_RS14225 PF00072 Response regulator receiver domain DF008_RS14230 PF02557 D-alanyl-D-alanine carboxypeptidase DF008_RS14235 PF01171 PP-loop family DF008_RS14240 PF10518 TAT (twin-arginine translocation) pathway signal sequence DF008_RS14240 PF00149 Calcineurin-like phosphoesterase DF008_RS14245 PF01370 NAD dependent epimerase/dehydratase family DF008_RS14250 PF13419 Haloacid dehalogenase-like hydrolase DF008_RS14260 PF01979 Amidohydrolase family DF008_RS14270 PF00005 ABC transporter DF008_RS14270 PF12857 TOBE-like domain DF008_RS14280 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily DF008_RS14285 PF01554 MatE DF008_RS14300 PF06445 GyrI-like small molecule binding domain DF008_RS14300 PF13411 MerR HTH family regulatory protein DF008_RS14305 PF02080 TrkA-C domain DF008_RS14305 PF00999 Sodium/hydrogen exchanger family DF008_RS14305 PF03471 Transporter associated domain DF008_RS14310 PF10026 Predicted Zn-dependent protease (DUF2268) DF008_RS14320 PF00117 Glutamine amidotransferase class-I DF008_RS14320 PF00958 GMP synthase C terminal domain DF008_RS14320 PF13673 Acetyltransferase (GNAT) domain DF008_RS14320 PF03352 Methyladenine glycosylase DF008_RS14320 PF13302 Acetyltransferase (GNAT) domain DF008_RS14330 PF00805 Pentapeptide repeats (8 copies) DF008_RS14335 PF03831 PhnA domain DF008_RS14335 PF08274 PhnA Zinc-Ribbon DF008_RS14340 PF02687 FtsX-like permease family DF008_RS14340 PF00005 ABC transporter DF008_RS14340 PF12704 MacB-like periplasmic core domain DF008_RS14350 PF08448 PAS fold DF008_RS14350 PF08447 PAS fold DF008_RS14350 PF05231 MASE1 DF008_RS14350 PF00563 EAL domain DF008_RS14350 PF13426 PAS domain DF008_RS14350 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS14355 PF02581 Thiamine monophosphate synthase DF008_RS14360 PF00701 Dihydrodipicolinate synthetase family DF008_RS14365 PF01380 SIS domain DF008_RS14365 PF00571 CBS domain DF008_RS14375 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS14385 PF00857 Isochorismatase family DF008_RS14395 PF13411 MerR HTH family regulatory protein DF008_RS14425 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS14425 PF03466 LysR substrate binding domain DF008_RS14430 PF00294 pfkB family carbohydrate kinase DF008_RS14435 PF07071 KDGP aldolase DF008_RS14440 PF03841 L-seryl-tRNA selenium transferase DF008_RS14445 PF01979 Amidohydrolase family DF008_RS14455 PF02378 Phosphotransferase system, EIIC DF008_RS14460 PF00392 Bacterial regulatory proteins, gntR family DF008_RS14460 PF07702 UTRA domain DF008_RS14465 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DF008_RS14470 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS14480 PF02378 Phosphotransferase system, EIIC DF008_RS14485 PF00753 Metallo-beta-lactamase superfamily DF008_RS14500 PF01695 IstB-like ATP binding protein DF008_RS14535 PF03796 DnaB-like helicase C terminal domain DF008_RS14535 PF00772 DnaB-like helicase N terminal domain DF008_RS14545 PF01368 DHH family DF008_RS14545 PF02272 DHHA1 domain DF008_RS14565 PF00436 Single-strand binding protein family DF008_RS14575 PF00155 Aminotransferase class I and II DF008_RS14590 PF01206 Sulfurtransferase TusA DF008_RS14605 PF00266 Aminotransferase class-V DF008_RS14610 PF02195 ParB-like nuclease domain DF008_RS14610 PF17762 HTH domain found in ParB protein DF008_RS14615 PF13614 AAA domain DF008_RS14625 PF02527 rRNA small subunit methyltransferase G DF008_RS14640 PF14804 Jag N-terminus DF008_RS14640 PF01424 R3H domain DF008_RS14645 PF02096 60Kd inner membrane protein DF008_RS14650 PF01809 Putative membrane protein insertion efficiency factor DF008_RS14660 PF00468 Ribosomal protein L34 DF008_RS14665 PF00308 Bacterial dnaA protein DF008_RS14665 PF08299 Bacterial dnaA protein helix-turn-helix DF008_RS14665 PF11638 DnaA N-terminal domain DF008_RS14670 PF02768 DNA polymerase III beta subunit, C-terminal domain DF008_RS14670 PF00712 DNA polymerase III beta subunit, N-terminal domain DF008_RS14670 PF02767 DNA polymerase III beta subunit, central domain DF008_RS14685 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS14685 PF01751 Toprim domain DF008_RS14685 PF00986 DNA gyrase B subunit, carboxyl terminus DF008_RS14685 PF00204 DNA gyrase B DF008_RS14690 PF00521 DNA gyrase/topoisomerase IV, subunit A DF008_RS14690 PF03989 DNA gyrase C-terminal domain, beta-propeller DF008_RS14705 PF01740 STAS domain DF008_RS14710 PF13581 Histidine kinase-like ATPase domain DF008_RS14715 PF04542 Sigma-70 region 2 DF008_RS14715 PF04545 Sigma-70, region 4 DF008_RS14715 PF04539 Sigma-70 region 3 DF008_RS14765 PF08279 HTH domain DF008_RS14765 PF02829 3H domain DF008_RS14770 PF00924 Mechanosensitive ion channel DF008_RS14770 PF05552 Conserved TM helix DF008_RS14775 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DF008_RS14775 PF02403 Seryl-tRNA synthetase N-terminal domain DF008_RS14780 PF14437 MafB19-like deaminase DF008_RS14795 PF12169 DNA polymerase III subunits gamma and tau domain III DF008_RS14815 PF00534 Glycosyl transferases group 1 DF008_RS14815 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase DF008_RS15055 PF02785 Biotin carboxylase C-terminal domain DF008_RS15055 PF00289 Biotin carboxylase, N-terminal domain DF008_RS15055 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain DF008_RS15055 PF02436 Conserved carboxylase domain DF008_RS15055 PF00364 Biotin-requiring enzyme DF008_RS15055 PF00682 HMGL-like DF008_RS15060 PF00009 Elongation factor Tu GTP binding domain DF008_RS15060 PF14492 Elongation Factor G, domain II DF008_RS15060 PF00679 Elongation factor G C-terminus DF008_RS15060 PF03144 Elongation factor Tu domain 2 DF008_RS15060 PF03764 Elongation factor G, domain IV DF008_RS15065 PF17727 CtsR C-terminal dimerization domain DF008_RS15065 PF05848 CtsR N-terminal HTH domain DF008_RS15070 PF02151 UvrB/uvrC motif DF008_RS15075 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain DF008_RS15080 PF02861 Clp amino terminal domain, pathogenicity island component DF008_RS15080 PF10431 C-terminal, D2-small domain, of ClpB protein DF008_RS15080 PF00004 ATPase family associated with various cellular activities (AAA) DF008_RS15080 PF07724 AAA domain (Cdc48 subfamily) DF008_RS15080 PF17871 AAA lid domain DF008_RS15085 PF18073 Rubredoxin metal binding domain DF008_RS15115 PF04616 Glycosyl hydrolases family 43 DF008_RS15115 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain DF008_RS15125 PF04198 Putative sugar-binding domain DF008_RS15130 PF00676 Dehydrogenase E1 component DF008_RS15135 PF02780 Transketolase, C-terminal domain DF008_RS15135 PF02779 Transketolase, pyrimidine binding domain DF008_RS15140 PF02817 e3 binding domain DF008_RS15140 PF00364 Biotin-requiring enzyme DF008_RS15140 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) DF008_RS15145 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain DF008_RS15145 PF07992 Pyridine nucleotide-disulphide oxidoreductase DF008_RS15150 PF00874 PRD domain DF008_RS15150 PF03610 PTS system fructose IIA component DF008_RS15150 PF00158 Sigma-54 interaction domain DF008_RS15160 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS15165 PF03611 PTS system sugar-specific permease component DF008_RS15175 PF00596 Class II Aldolase and Adducin N-terminal domain DF008_RS15180 PF10437 Bacterial lipoate protein ligase C-terminus DF008_RS15180 PF03099 Biotin/lipoate A/B protein ligase family DF008_RS15220 PF00636 Ribonuclease III domain DF008_RS15225 PF02511 Thymidylate synthase complementing protein DF008_RS15230 PF00588 SpoU rRNA Methylase family DF008_RS15230 PF08032 RNA 2'-O ribose methyltransferase substrate binding DF008_RS15235 PF05991 YacP-like NYN domain DF008_RS15240 PF04542 Sigma-70 region 2 DF008_RS15240 PF08281 Sigma-70, region 4 DF008_RS15260 PF02357 Transcription termination factor nusG DF008_RS15260 PF00467 KOW motif DF008_RS15330 PF00573 Ribosomal protein L4/L1 family DF008_RS15385 PF00281 Ribosomal protein L5 DF008_RS15385 PF00673 ribosomal L5P family C-terminus DF008_RS15425 PF00344 SecY translocase DF008_RS15435 PF00557 Metallopeptidase family M24 DF008_RS15450 PF00444 Ribosomal protein L36 DF008_RS15490 PF02361 Cobalt transport protein DF008_RS15510 PF01520 N-acetylmuramoyl-L-alanine amidase DF008_RS15645 PF00155 Aminotransferase class I and II DF008_RS15650 PF03477 ATP cone domain DF008_RS15650 PF13597 Anaerobic ribonucleoside-triphosphate reductase DF008_RS15655 PF04055 Radical SAM superfamily DF008_RS15755 PF02457 DisA bacterial checkpoint controller nucleotide-binding DF008_RS15770 PF01515 Phosphate acetyl/butaryl transferase DF008_RS15775 PF00871 Acetokinase family DF008_RS15810 PF01380 SIS domain DF008_RS15815 PF00581 Rhodanese-like domain DF008_RS15825 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) DF008_RS15830 PF08486 Stage II sporulation protein DF008_RS15840 PF12116 Stage III sporulation protein D DF008_RS15855 PF06866 Protein of unknown function (DUF1256) DF008_RS15870 PF13538 UvrD-like helicase C-terminal domain DF008_RS15870 PF14490 Helix-hairpin-helix containing domain DF008_RS15870 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain DF008_RS15880 PF00874 PRD domain DF008_RS15880 PF05043 Mga helix-turn-helix domain DF008_RS15880 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS15880 PF08279 HTH domain DF008_RS15885 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit DF008_RS15890 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS15895 PF02378 Phosphotransferase system, EIIC DF008_RS15905 PF01112 Asparaginase DF008_RS15910 PF01546 Peptidase family M20/M25/M40 DF008_RS15915 PF03932 CutC family DF008_RS15920 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus DF008_RS15920 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein DF008_RS15930 PF00472 RF-1 domain DF008_RS15930 PF03462 PCRF domain DF008_RS15935 PF16921 Tex protein YqgF-like domain DF008_RS15935 PF17674 HHH domain DF008_RS15935 PF00575 S1 RNA binding domain DF008_RS15935 PF09371 Tex-like protein N-terminal domain DF008_RS15940 PF01979 Amidohydrolase family DF008_RS15955 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE DF008_RS15960 PF00814 Glycoprotease family DF008_RS15965 PF00583 Acetyltransferase (GNAT) family DF008_RS15980 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal DF008_RS15980 PF18524 High potential iron-sulfur protein like DF008_RS16005 PF00005 ABC transporter DF008_RS16015 PF13520 Amino acid permease DF008_RS16020 PF01546 Peptidase family M20/M25/M40 DF008_RS16020 PF07687 Peptidase dimerisation domain DF008_RS16025 PF00158 Sigma-54 interaction domain DF008_RS16025 PF13426 PAS domain DF008_RS16025 PF02954 Bacterial regulatory protein, Fis family DF008_RS16035 PF01554 MatE DF008_RS16040 PF16326 ABC transporter C-terminal domain DF008_RS16040 PF00005 ABC transporter DF008_RS16040 PF12848 ABC transporter DF008_RS16055 PF12838 4Fe-4S dicluster domain DF008_RS16065 PF03063 Prismane/CO dehydrogenase family DF008_RS16090 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain DF008_RS16090 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase DF008_RS16095 PF05569 BlaR1 peptidase M56 DF008_RS16095 PF00905 Penicillin binding protein transpeptidase domain DF008_RS16110 PF00877 NlpC/P60 family DF008_RS16110 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain DF008_RS16120 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B DF008_RS16135 PF08546 Ketopantoate reductase PanE/ApbA C terminal DF008_RS16135 PF02558 Ketopantoate reductase PanE/ApbA DF008_RS16140 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family DF008_RS16140 PF03466 LysR substrate binding domain DF008_RS16145 PF03601 Conserved hypothetical protein 698 DF008_RS16170 PF00731 AIR carboxylase DF008_RS16175 PF01969 Protein of unknown function DUF111 DF008_RS16180 PF01969 Protein of unknown function DUF111 DF008_RS16215 PF17760 UvrA interaction domain DF008_RS16215 PF00005 ABC transporter DF008_RS16215 PF17755 UvrA DNA-binding domain DF008_RS16220 PF00196 Bacterial regulatory proteins, luxR family DF008_RS16220 PF00563 EAL domain DF008_RS16240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS16255 PF00483 Nucleotidyl transferase DF008_RS16275 PF01797 Transposase IS200 like DF008_RS16285 PF00881 Nitroreductase family DF008_RS16290 PF00731 AIR carboxylase DF008_RS16295 PF01259 SAICAR synthetase DF008_RS16300 PF00156 Phosphoribosyl transferase domain DF008_RS16310 PF00551 Formyl transferase DF008_RS16320 PF02844 Phosphoribosylglycinamide synthetase, N domain DF008_RS16320 PF02843 Phosphoribosylglycinamide synthetase, C domain DF008_RS16320 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain DF008_RS16325 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain DF008_RS16325 PF02769 AIR synthase related protein, C-terminal domain DF008_RS16325 PF00586 AIR synthase related protein, N-terminal domain DF008_RS16330 PF01464 Transglycosylase SLT domain DF008_RS16340 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DF008_RS16385 PF02465 Flagellar hook-associated protein 2 N-terminus DF008_RS16385 PF07195 Flagellar hook-associated protein 2 C-terminus DF008_RS16395 PF00669 Bacterial flagellin N-terminal helical region DF008_RS16395 PF00700 Bacterial flagellin C-terminal helical region DF008_RS16400 PF00535 Glycosyl transferase family 2 DF008_RS16410 PF02348 Cytidylyltransferase DF008_RS16425 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DF008_RS16425 PF00460 Flagella basal body rod protein DF008_RS16430 PF00460 Flagella basal body rod protein DF008_RS16430 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DF008_RS16435 PF02049 Flagellar hook-basal body complex protein FliE DF008_RS16440 PF08345 Flagellar M-ring protein C-terminal DF008_RS16440 PF01514 Secretory protein of YscJ/FliF family DF008_RS16445 PF14841 FliG middle domain DF008_RS16445 PF14842 FliG N-terminal domain DF008_RS16445 PF01706 FliG C-terminal domain DF008_RS16455 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain DF008_RS16455 PF02874 ATP synthase alpha/beta family, beta-barrel domain DF008_RS16455 PF18269 T3SS EscN ATPase C-terminal domain DF008_RS16470 PF03963 Flagellar hook capping protein - N-terminal region DF008_RS16475 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DF008_RS16475 PF00460 Flagella basal body rod protein DF008_RS16485 PF01618 MotA/TolQ/ExbB proton channel family DF008_RS16490 PF00691 OmpA family DF008_RS16490 PF13677 Membrane MotB of proton-channel complex MotA/MotB DF008_RS16505 PF00813 FliP family DF008_RS16510 PF01313 Bacterial export proteins, family 3 DF008_RS16515 PF01312 FlhB HrpN YscU SpaS Family DF008_RS16520 PF00771 FHIPEP family DF008_RS16525 PF00448 SRP54-type protein, GTPase domain DF008_RS16530 PF10609 NUBPL iron-transfer P-loop NTPase DF008_RS16535 PF04542 Sigma-70 region 2 DF008_RS16535 PF04539 Sigma-70 region 3 DF008_RS16535 PF04545 Sigma-70, region 4 DF008_RS16550 PF00460 Flagella basal body rod protein DF008_RS16550 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DF008_RS16555 PF06429 Flagellar basal body rod FlgEFG protein C-terminal DF008_RS16555 PF00460 Flagella basal body rod protein DF008_RS16565 PF04509 CheC-like family DF008_RS16565 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term DF008_RS16575 PF00183 Hsp90 protein DF008_RS16580 PF00465 Iron-containing alcohol dehydrogenase DF008_RS16585 PF04055 Radical SAM superfamily DF008_RS16590 PF12833 Helix-turn-helix domain DF008_RS16600 PF01638 HxlR-like helix-turn-helix DF008_RS16625 PF03610 PTS system fructose IIA component DF008_RS16625 PF00874 PRD domain DF008_RS16625 PF00158 Sigma-54 interaction domain DF008_RS16630 PF00158 Sigma-54 interaction domain DF008_RS16630 PF03610 PTS system fructose IIA component DF008_RS16630 PF00874 PRD domain DF008_RS16645 PF03830 PTS system sorbose subfamily IIB component DF008_RS16650 PF03609 PTS system sorbose-specific iic component DF008_RS16655 PF03613 PTS system mannose/fructose/sorbose family IID component DF008_RS16665 PF01546 Peptidase family M20/M25/M40 DF008_RS16675 PF01381 Helix-turn-helix DF008_RS16680 PF13396 Phospholipase_D-nuclease N-terminal DF008_RS16685 PF00005 ABC transporter DF008_RS16685 PF13732 Domain of unknown function (DUF4162) DF008_RS16710 PF00356 Bacterial regulatory proteins, lacI family DF008_RS16715 PF00294 pfkB family carbohydrate kinase DF008_RS16720 PF13407 Periplasmic binding protein domain DF008_RS16725 PF00005 ABC transporter DF008_RS16730 PF02653 Branched-chain amino acid transport system / permease component DF008_RS16735 PF07687 Peptidase dimerisation domain DF008_RS16735 PF01546 Peptidase family M20/M25/M40 DF008_RS16745 PF01546 Peptidase family M20/M25/M40 DF008_RS16780 PF01022 Bacterial regulatory protein, arsR family DF008_RS16785 PF00403 Heavy-metal-associated domain DF008_RS16805 PF09335 SNARE associated Golgi protein DF008_RS16820 PF00005 ABC transporter DF008_RS16830 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS16830 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS16835 PF00072 Response regulator receiver domain DF008_RS16835 PF00486 Transcriptional regulatory protein, C terminal DF008_RS16860 PF02553 Cobalt transport protein component CbiN DF008_RS16865 PF02361 Cobalt transport protein DF008_RS16870 PF00005 ABC transporter DF008_RS16875 PF00580 UvrD/REP helicase N-terminal domain DF008_RS16875 PF13361 UvrD-like helicase C-terminal domain DF008_RS16880 PF02127 Aminopeptidase I zinc metalloprotease (M18) DF008_RS16890 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD DF008_RS16900 PF07085 DRTGG domain DF008_RS16900 PF00571 CBS domain DF008_RS16900 PF01368 DHH family DF008_RS16900 PF02833 DHHA2 domain DF008_RS16905 PF00171 Aldehyde dehydrogenase family DF008_RS16905 PF00465 Iron-containing alcohol dehydrogenase DF008_RS16915 PF00005 ABC transporter DF008_RS16925 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS16925 PF17203 Single cache domain 3 DF008_RS16925 PF00989 PAS fold DF008_RS16925 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain DF008_RS16930 PF04397 LytTr DNA-binding domain DF008_RS16930 PF00072 Response regulator receiver domain DF008_RS16955 PF00753 Metallo-beta-lactamase superfamily DF008_RS16955 PF16123 Hydroxyacylglutathione hydrolase C-terminus DF008_RS16960 PF04607 Region found in RelA / SpoT proteins DF008_RS17005 PF00367 phosphotransferase system, EIIB DF008_RS17005 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS17005 PF02378 Phosphotransferase system, EIIC DF008_RS17010 PF00232 Glycosyl hydrolase family 1 DF008_RS17015 PF03123 CAT RNA binding domain DF008_RS17015 PF00874 PRD domain DF008_RS17025 PF13537 Glutamine amidotransferase domain DF008_RS17025 PF00733 Asparagine synthase DF008_RS17040 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain DF008_RS17040 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain DF008_RS17045 PF02515 CoA-transferase family III DF008_RS17050 PF01869 BadF/BadG/BcrA/BcrD ATPase family DF008_RS17055 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DF008_RS17060 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component DF008_RS17065 PF02770 Acyl-CoA dehydrogenase, middle domain DF008_RS17065 PF00441 Acyl-CoA dehydrogenase, C-terminal domain DF008_RS17065 PF02771 Acyl-CoA dehydrogenase, N-terminal domain DF008_RS17070 PF01012 Electron transfer flavoprotein domain DF008_RS17075 PF00766 Electron transfer flavoprotein FAD-binding domain DF008_RS17075 PF01012 Electron transfer flavoprotein domain DF008_RS17075 PF13237 4Fe-4S dicluster domain DF008_RS17085 PF01116 Fructose-bisphosphate aldolase class-II DF008_RS17110 PF12323 Helix-turn-helix domain DF008_RS17110 PF01385 Probable transposase DF008_RS17110 PF07282 Putative transposase DNA-binding domain DF008_RS17120 PF05958 tRNA (Uracil-5-)-methyltransferase DF008_RS17145 PF00158 Sigma-54 interaction domain DF008_RS17145 PF13426 PAS domain DF008_RS17145 PF02954 Bacterial regulatory protein, Fis family DF008_RS17160 PF00291 Pyridoxal-phosphate dependent enzyme DF008_RS17165 PF16552 D-ornithine 4,5-aminomutase alpha-subunit DF008_RS17170 PF02310 B12 binding domain DF008_RS17170 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit DF008_RS17170 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase DF008_RS17175 PF13941 MutL protein DF008_RS17180 PF01168 Alanine racemase, N-terminal domain DF008_RS17185 PF03553 Na+/H+ antiporter family DF008_RS17215 PF12833 Helix-turn-helix domain DF008_RS17220 PF13538 UvrD-like helicase C-terminal domain DF008_RS17225 PF00905 Penicillin binding protein transpeptidase domain DF008_RS17230 PF00005 ABC transporter DF008_RS17240 PF00989 PAS fold DF008_RS17240 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS17240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS17245 PF00486 Transcriptional regulatory protein, C terminal DF008_RS17245 PF00072 Response regulator receiver domain DF008_RS17250 PF17754 MftR C-terminal domain DF008_RS17250 PF00440 Bacterial regulatory proteins, tetR family DF008_RS17255 PF00753 Metallo-beta-lactamase superfamily DF008_RS17260 PF01418 Helix-turn-helix domain, rpiR family DF008_RS17260 PF01380 SIS domain DF008_RS17280 PF00367 phosphotransferase system, EIIB DF008_RS17280 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 DF008_RS17280 PF02378 Phosphotransferase system, EIIC DF008_RS17285 PF05569 BlaR1 peptidase M56 DF008_RS17285 PF00905 Penicillin binding protein transpeptidase domain DF008_RS17290 PF03965 Penicillinase repressor DF008_RS17325 PF00005 ABC transporter DF008_RS17340 PF00072 Response regulator receiver domain DF008_RS17340 PF00486 Transcriptional regulatory protein, C terminal DF008_RS17345 PF13426 PAS domain DF008_RS17345 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS17345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS17345 PF00672 HAMP domain DF008_RS17350 PF02687 FtsX-like permease family DF008_RS17350 PF12704 MacB-like periplasmic core domain DF008_RS17350 PF00005 ABC transporter DF008_RS17355 PF00005 ABC transporter DF008_RS17360 PF01066 CDP-alcohol phosphatidyltransferase DF008_RS17365 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS17365 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS17370 PF00486 Transcriptional regulatory protein, C terminal DF008_RS17370 PF00072 Response regulator receiver domain DF008_RS17375 PF00795 Carbon-nitrogen hydrolase DF008_RS17380 PF00893 Small Multidrug Resistance protein DF008_RS17385 PF01259 SAICAR synthetase DF008_RS17390 PF00107 Zinc-binding dehydrogenase DF008_RS17390 PF08240 Alcohol dehydrogenase GroES-like domain DF008_RS17400 PF03830 PTS system sorbose subfamily IIB component DF008_RS17410 PF03613 PTS system mannose/fructose/sorbose family IID component DF008_RS17430 PF07943 Penicillin-binding protein 5, C-terminal domain DF008_RS17430 PF00768 D-alanyl-D-alanine carboxypeptidase DF008_RS17435 PF03610 PTS system fructose IIA component DF008_RS17435 PF00874 PRD domain DF008_RS17435 PF00158 Sigma-54 interaction domain DF008_RS17455 PF02702 Osmosensitive K+ channel His kinase sensor domain DF008_RS17455 PF13493 Domain of unknown function (DUF4118) DF008_RS17455 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS17455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS17460 PF00072 Response regulator receiver domain DF008_RS17460 PF00486 Transcriptional regulatory protein, C terminal DF008_RS17470 PF00563 EAL domain DF008_RS17470 PF03707 Bacterial signalling protein N terminal repeat DF008_RS17470 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS17480 PF01546 Peptidase family M20/M25/M40 DF008_RS17480 PF07687 Peptidase dimerisation domain DF008_RS17485 PF03806 AbgT putative transporter family DF008_RS17510 PF08279 HTH domain DF008_RS17510 PF13280 WYL domain DF008_RS17520 PF00072 Response regulator receiver domain DF008_RS17525 PF04509 CheC-like family DF008_RS17530 PF03975 CheD chemotactic sensory transduction DF008_RS17535 PF01584 CheW-like domain DF008_RS17540 PF00072 Response regulator receiver domain DF008_RS17540 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS17545 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain DF008_RS17545 PF02203 Tar ligand binding domain homologue DF008_RS17545 PF00672 HAMP domain DF008_RS17550 PF01584 CheW-like domain DF008_RS17550 PF02895 Signal transducing histidine kinase, homodimeric domain DF008_RS17550 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS17550 PF01627 Hpt domain DF008_RS17550 PF07194 P2 response regulator binding domain DF008_RS17555 PF01584 CheW-like domain DF008_RS17560 PF01739 CheR methyltransferase, SAM binding domain DF008_RS17560 PF03705 CheR methyltransferase, all-alpha domain DF008_RS17565 PF00072 Response regulator receiver domain DF008_RS17565 PF01339 CheB methylesterase DF008_RS17575 PF02423 Ornithine cyclodeaminase/mu-crystallin family DF008_RS17590 PF03965 Penicillinase repressor DF008_RS17595 PF00905 Penicillin binding protein transpeptidase domain DF008_RS17595 PF05569 BlaR1 peptidase M56 DF008_RS17620 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF DF008_RS17620 PF01189 16S rRNA methyltransferase RsmB/F DF008_RS17620 PF17126 RsmF rRNA methyltransferase first C-terminal domain DF008_RS17625 PF10502 Signal peptidase, peptidase S26 DF008_RS17630 PF10502 Signal peptidase, peptidase S26 DF008_RS17640 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) DF008_RS17640 PF03129 Anticodon binding domain DF008_RS17640 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain DF008_RS17670 PF08331 Domain of unknown function (DUF1730) DF008_RS17675 PF05362 Lon protease (S16) C-terminal proteolytic domain DF008_RS17675 PF13654 AAA domain DF008_RS17680 PF10576 Iron-sulfur binding domain of endonuclease III DF008_RS17680 PF00633 Helix-hairpin-helix motif DF008_RS17680 PF00730 HhH-GPD superfamily base excision DNA repair protein DF008_RS17685 PF00588 SpoU rRNA Methylase family DF008_RS17690 PF02645 Uncharacterised protein, DegV family COG1307 DF008_RS17695 PF02608 ABC transporter substrate-binding protein PnrA-like DF008_RS17700 PF02608 ABC transporter substrate-binding protein PnrA-like DF008_RS17715 PF04286 Protein of unknown function (DUF445) DF008_RS17750 PF00171 Aldehyde dehydrogenase family DF008_RS17755 PF00440 Bacterial regulatory proteins, tetR family DF008_RS17755 PF17932 Tetracyclin repressor-like, C-terminal domain DF008_RS17760 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain DF008_RS17760 PF00391 PEP-utilising enzyme, mobile domain DF008_RS17770 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS17770 PF03707 Bacterial signalling protein N terminal repeat DF008_RS17770 PF00563 EAL domain DF008_RS17775 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS17775 PF17151 Periplasmic sensor domain DF008_RS17780 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS17780 PF17151 Periplasmic sensor domain DF008_RS17810 PF01580 FtsK/SpoIIIE family DF008_RS17810 PF09397 Ftsk gamma domain DF008_RS17810 PF17854 FtsK alpha domain DF008_RS17835 PF11922 Domain of unknown function (DUF3440) DF008_RS17835 PF01507 Phosphoadenosine phosphosulfate reductase family DF008_RS17840 PF02195 ParB-like nuclease domain DF008_RS17855 PF05067 Manganese containing catalase DF008_RS17865 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain DF008_RS17865 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain DF008_RS17905 PF00654 Voltage gated chloride channel DF008_RS17925 PF00072 Response regulator receiver domain DF008_RS17925 PF04397 LytTr DNA-binding domain DF008_RS17930 PF02687 FtsX-like permease family DF008_RS17935 PF00005 ABC transporter DF008_RS17950 PF06445 GyrI-like small molecule binding domain DF008_RS17950 PF13411 MerR HTH family regulatory protein DF008_RS17995 PF03796 DnaB-like helicase C terminal domain DF008_RS17995 PF00772 DnaB-like helicase N terminal domain DF008_RS18015 PF00664 ABC transporter transmembrane region DF008_RS18015 PF00005 ABC transporter DF008_RS18020 PF13545 Crp-like helix-turn-helix domain DF008_RS18020 PF00027 Cyclic nucleotide-binding domain DF008_RS18025 PF01554 MatE DF008_RS18040 PF08713 DNA alkylation repair enzyme DF008_RS18050 PF12697 Alpha/beta hydrolase family DF008_RS18095 PF00072 Response regulator receiver domain DF008_RS18095 PF00486 Transcriptional regulatory protein, C terminal DF008_RS18100 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS18100 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS18105 PF00005 ABC transporter DF008_RS18120 PF07729 FCD domain DF008_RS18120 PF00392 Bacterial regulatory proteins, gntR family DF008_RS18125 PF07676 WD40-like Beta Propeller Repeat DF008_RS18125 PF00326 Prolyl oligopeptidase family DF008_RS18130 PF07676 WD40-like Beta Propeller Repeat DF008_RS18130 PF00326 Prolyl oligopeptidase family DF008_RS18140 PF01380 SIS domain DF008_RS18140 PF01418 Helix-turn-helix domain, rpiR family DF008_RS18145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 DF008_RS18145 PF02378 Phosphotransferase system, EIIC DF008_RS18145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit DF008_RS18150 PF01074 Glycosyl hydrolases family 38 N-terminal domain DF008_RS18150 PF07748 Glycosyl hydrolases family 38 C-terminal domain DF008_RS18150 PF09261 Alpha mannosidase middle domain DF008_RS18155 PF00128 Alpha amylase, catalytic domain DF008_RS18160 PF04397 LytTr DNA-binding domain DF008_RS18160 PF00072 Response regulator receiver domain DF008_RS18185 PF04055 Radical SAM superfamily DF008_RS18185 PF13186 Iron-sulfur cluster-binding domain DF008_RS18190 PF04055 Radical SAM superfamily DF008_RS18190 PF06463 Molybdenum Cofactor Synthesis C DF008_RS18195 PF04055 Radical SAM superfamily DF008_RS18195 PF06463 Molybdenum Cofactor Synthesis C DF008_RS18205 PF00005 ABC transporter DF008_RS18210 PF00005 ABC transporter DF008_RS18210 PF00664 ABC transporter transmembrane region DF008_RS18215 PF13333 Integrase core domain DF008_RS18215 PF00665 Integrase core domain DF008_RS18215 PF13276 HTH-like domain DF008_RS18230 PF00654 Voltage gated chloride channel DF008_RS18265 PF00005 ABC transporter DF008_RS18270 PF00072 Response regulator receiver domain DF008_RS18270 PF00486 Transcriptional regulatory protein, C terminal DF008_RS18275 PF00989 PAS fold DF008_RS18275 PF00672 HAMP domain DF008_RS18275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase DF008_RS18275 PF18698 Histidine kinase sensor domain DF008_RS18275 PF00512 His Kinase A (phospho-acceptor) domain DF008_RS18310 PF04542 Sigma-70 region 2 DF008_RS18310 PF08281 Sigma-70, region 4 DF008_RS18325 PF07969 Amidohydrolase family DF008_RS18345 PF00083 Sugar (and other) transporter DF008_RS18350 PF00474 Sodium:solute symporter family DF008_RS18355 PF00356 Bacterial regulatory proteins, lacI family DF008_RS18360 PF00004 ATPase family associated with various cellular activities (AAA) DF008_RS18360 PF17862 AAA+ lid domain DF008_RS18360 PF01434 Peptidase family M41 DF008_RS18365 PF05198 Translation initiation factor IF-3, N-terminal domain DF008_RS18365 PF00707 Translation initiation factor IF-3, C-terminal domain DF008_RS18410 PF09278 MerR, DNA binding DF008_RS18410 PF00376 MerR family regulatory protein DF008_RS18430 PF02386 Cation transport protein DF008_RS18435 PF02254 TrkA-N domain DF008_RS18435 PF02080 TrkA-C domain DF008_RS18440 PF00588 SpoU rRNA Methylase family DF008_RS18440 PF08032 RNA 2'-O ribose methyltransferase substrate binding DF008_RS18445 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain DF008_RS18445 PF01409 tRNA synthetases class II core domain (F) DF008_RS18450 PF01588 Putative tRNA binding domain DF008_RS18450 PF03483 B3/4 domain DF008_RS18450 PF03484 tRNA synthetase B5 domain DF008_RS18450 PF03147 Ferredoxin-fold anticodon binding domain DF008_RS18450 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain DF008_RS18465 PF12392 Collagenase DF008_RS18465 PF01136 Peptidase family U32 DF008_RS18475 PF00293 NUDIX domain DF008_RS18485 PF05230 MASE2 domain DF008_RS18485 PF00990 Diguanylate cyclase, GGDEF domain DF008_RS18490 PF07687 Peptidase dimerisation domain DF008_RS18490 PF01546 Peptidase family M20/M25/M40 DF008_RS18500 PF04463 Protein of unknown function (DUF523)