locus-tag class description CDIF29020_RS00005 PF11638 DnaA N-terminal domain CDIF29020_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CDIF29020_RS00005 PF00308 Bacterial dnaA protein CDIF29020_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CDIF29020_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CDIF29020_RS00010 PF02767 DNA polymerase III beta subunit, central domain CDIF29020_RS00020 PF02463 RecF/RecN/SMC N terminal domain CDIF29020_RS00025 PF00204 DNA gyrase B CDIF29020_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CDIF29020_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS00025 PF01751 Toprim domain CDIF29020_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CDIF29020_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CDIF29020_RS00045 PF01740 STAS domain CDIF29020_RS00050 PF13581 Histidine kinase-like ATPase domain CDIF29020_RS00055 PF04545 Sigma-70, region 4 CDIF29020_RS00055 PF04542 Sigma-70 region 2 CDIF29020_RS00055 PF04539 Sigma-70 region 3 CDIF29020_RS00105 PF08279 HTH domain CDIF29020_RS00105 PF02829 3H domain CDIF29020_RS00110 PF05552 Conserved TM helix CDIF29020_RS00110 PF00924 Mechanosensitive ion channel CDIF29020_RS00115 PF02403 Seryl-tRNA synthetase N-terminal domain CDIF29020_RS00115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29020_RS00120 PF14437 MafB19-like deaminase CDIF29020_RS00135 PF12169 DNA polymerase III subunits gamma and tau domain III CDIF29020_RS00140 PF02575 YbaB/EbfC DNA-binding family CDIF29020_RS00145 PF13662 Toprim domain CDIF29020_RS00145 PF02132 RecR protein CDIF29020_RS00155 PF00534 Glycosyl transferases group 1 CDIF29020_RS00155 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29020_RS00395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29020_RS00395 PF00364 Biotin-requiring enzyme CDIF29020_RS00395 PF00289 Biotin carboxylase, N-terminal domain CDIF29020_RS00395 PF02785 Biotin carboxylase C-terminal domain CDIF29020_RS00395 PF00682 HMGL-like CDIF29020_RS00395 PF02436 Conserved carboxylase domain CDIF29020_RS00400 PF03764 Elongation factor G, domain IV CDIF29020_RS00400 PF14492 Elongation Factor G, domain II CDIF29020_RS00400 PF03144 Elongation factor Tu domain 2 CDIF29020_RS00400 PF00679 Elongation factor G C-terminus CDIF29020_RS00400 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS00405 PF17727 CtsR C-terminal dimerization domain CDIF29020_RS00405 PF05848 CtsR N-terminal HTH domain CDIF29020_RS00410 PF02151 UvrB/uvrC motif CDIF29020_RS00415 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CDIF29020_RS00420 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29020_RS00420 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29020_RS00420 PF17871 AAA lid domain CDIF29020_RS00420 PF07724 AAA domain (Cdc48 subfamily) CDIF29020_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS00425 PF18073 Rubredoxin metal binding domain CDIF29020_RS00430 PF10635 DisA bacterial checkpoint controller linker region CDIF29020_RS00430 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDIF29020_RS00455 PF04616 Glycosyl hydrolases family 43 CDIF29020_RS00455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDIF29020_RS00465 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS00465 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS00470 PF00072 Response regulator receiver domain CDIF29020_RS00470 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS00480 PF04198 Putative sugar-binding domain CDIF29020_RS00485 PF00676 Dehydrogenase E1 component CDIF29020_RS00490 PF02779 Transketolase, pyrimidine binding domain CDIF29020_RS00490 PF02780 Transketolase, C-terminal domain CDIF29020_RS00495 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDIF29020_RS00495 PF02817 e3 binding domain CDIF29020_RS00495 PF00364 Biotin-requiring enzyme CDIF29020_RS00500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS00500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29020_RS00505 PF00158 Sigma-54 interaction domain CDIF29020_RS00505 PF00874 PRD domain CDIF29020_RS00505 PF03610 PTS system fructose IIA component CDIF29020_RS00515 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS00520 PF03611 PTS system sugar-specific permease component CDIF29020_RS00530 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29020_RS00535 PF10437 Bacterial lipoate protein ligase C-terminus CDIF29020_RS00535 PF03099 Biotin/lipoate A/B protein ligase family CDIF29020_RS00540 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDIF29020_RS00545 PF02542 YgbB family CDIF29020_RS00550 PF03129 Anticodon binding domain CDIF29020_RS00550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29020_RS00550 PF04073 Aminoacyl-tRNA editing domain CDIF29020_RS00555 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29020_RS00555 PF09180 Prolyl-tRNA synthetase, C-terminal CDIF29020_RS00555 PF03129 Anticodon binding domain CDIF29020_RS00560 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDIF29020_RS00570 PF01406 tRNA synthetases class I (C) catalytic domain CDIF29020_RS00570 PF09190 DALR domain CDIF29020_RS00575 PF00636 Ribonuclease III domain CDIF29020_RS00580 PF02511 Thymidylate synthase complementing protein CDIF29020_RS00585 PF00588 SpoU rRNA Methylase family CDIF29020_RS00585 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDIF29020_RS00590 PF05991 YacP-like NYN domain CDIF29020_RS00595 PF08281 Sigma-70, region 4 CDIF29020_RS00595 PF04542 Sigma-70 region 2 CDIF29020_RS00600 PF03144 Elongation factor Tu domain 2 CDIF29020_RS00600 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS00600 PF03143 Elongation factor Tu C-terminal domain CDIF29020_RS00605 PF00471 Ribosomal protein L33 CDIF29020_RS00615 PF00467 KOW motif CDIF29020_RS00615 PF02357 Transcription termination factor nusG CDIF29020_RS00620 PF03946 Ribosomal protein L11, N-terminal domain CDIF29020_RS00620 PF00298 Ribosomal protein L11, RNA binding domain CDIF29020_RS00625 PF00687 Ribosomal protein L1p/L10e family CDIF29020_RS00630 PF00466 Ribosomal protein L10 CDIF29020_RS00635 PF16320 Ribosomal protein L7/L12 dimerisation domain CDIF29020_RS00635 PF00542 Ribosomal protein L7/L12 C-terminal domain CDIF29020_RS00645 PF04563 RNA polymerase beta subunit CDIF29020_RS00645 PF00562 RNA polymerase Rpb2, domain 6 CDIF29020_RS00645 PF04565 RNA polymerase Rpb2, domain 3 CDIF29020_RS00645 PF04561 RNA polymerase Rpb2, domain 2 CDIF29020_RS00645 PF04560 RNA polymerase Rpb2, domain 7 CDIF29020_RS00645 PF10385 RNA polymerase beta subunit external 1 domain CDIF29020_RS00650 PF04998 RNA polymerase Rpb1, domain 5 CDIF29020_RS00650 PF05000 RNA polymerase Rpb1, domain 4 CDIF29020_RS00650 PF04983 RNA polymerase Rpb1, domain 3 CDIF29020_RS00650 PF00623 RNA polymerase Rpb1, domain 2 CDIF29020_RS00650 PF04997 RNA polymerase Rpb1, domain 1 CDIF29020_RS00655 PF00164 Ribosomal protein S12/S23 CDIF29020_RS00660 PF00177 Ribosomal protein S7p/S5e CDIF29020_RS00665 PF03764 Elongation factor G, domain IV CDIF29020_RS00665 PF03144 Elongation factor Tu domain 2 CDIF29020_RS00665 PF14492 Elongation Factor G, domain II CDIF29020_RS00665 PF00679 Elongation factor G C-terminus CDIF29020_RS00665 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS00670 PF03143 Elongation factor Tu C-terminal domain CDIF29020_RS00670 PF03144 Elongation factor Tu domain 2 CDIF29020_RS00670 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS00675 PF00338 Ribosomal protein S10p/S20e CDIF29020_RS00680 PF00297 Ribosomal protein L3 CDIF29020_RS00685 PF00573 Ribosomal protein L4/L1 family CDIF29020_RS00690 PF00276 Ribosomal protein L23 CDIF29020_RS00695 PF03947 Ribosomal Proteins L2, C-terminal domain CDIF29020_RS00695 PF00181 Ribosomal Proteins L2, RNA binding domain CDIF29020_RS00700 PF00203 Ribosomal protein S19 CDIF29020_RS00705 PF00237 Ribosomal protein L22p/L17e CDIF29020_RS00710 PF07650 KH domain CDIF29020_RS00710 PF00189 Ribosomal protein S3, C-terminal domain CDIF29020_RS00715 PF00252 Ribosomal protein L16p/L10e CDIF29020_RS00720 PF00831 Ribosomal L29 protein CDIF29020_RS00725 PF00366 Ribosomal protein S17 CDIF29020_RS00730 PF00238 Ribosomal protein L14p/L23e CDIF29020_RS00735 PF00467 KOW motif CDIF29020_RS00735 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDIF29020_RS00740 PF00281 Ribosomal protein L5 CDIF29020_RS00740 PF00673 ribosomal L5P family C-terminus CDIF29020_RS00745 PF00253 Ribosomal protein S14p/S29e CDIF29020_RS00750 PF00410 Ribosomal protein S8 CDIF29020_RS00755 PF00347 Ribosomal protein L6 CDIF29020_RS00760 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDIF29020_RS00765 PF03719 Ribosomal protein S5, C-terminal domain CDIF29020_RS00765 PF00333 Ribosomal protein S5, N-terminal domain CDIF29020_RS00770 PF00327 Ribosomal protein L30p/L7e CDIF29020_RS00775 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDIF29020_RS00780 PF00344 SecY translocase CDIF29020_RS00785 PF05191 Adenylate kinase, active site lid CDIF29020_RS00790 PF00557 Metallopeptidase family M24 CDIF29020_RS00800 PF01176 Translation initiation factor 1A / IF-1 CDIF29020_RS00805 PF00444 Ribosomal protein L36 CDIF29020_RS00810 PF00416 Ribosomal protein S13/S18 CDIF29020_RS00815 PF00411 Ribosomal protein S11 CDIF29020_RS00820 PF01479 S4 domain CDIF29020_RS00820 PF00163 Ribosomal protein S4/S9 N-terminal domain CDIF29020_RS00825 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDIF29020_RS00825 PF01000 RNA polymerase Rpb3/RpoA insert domain CDIF29020_RS00825 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDIF29020_RS00830 PF01196 Ribosomal protein L17 CDIF29020_RS00835 PF00005 ABC transporter CDIF29020_RS00840 PF00005 ABC transporter CDIF29020_RS00845 PF02361 Cobalt transport protein CDIF29020_RS00850 PF01416 tRNA pseudouridine synthase CDIF29020_RS00855 PF00572 Ribosomal protein L13 CDIF29020_RS00860 PF00380 Ribosomal protein S9/S16 CDIF29020_RS00865 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS01000 PF00155 Aminotransferase class I and II CDIF29020_RS01005 PF03477 ATP cone domain CDIF29020_RS01005 PF13597 Anaerobic ribonucleoside-triphosphate reductase CDIF29020_RS01010 PF04055 Radical SAM superfamily CDIF29020_RS01110 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDIF29020_RS01125 PF01515 Phosphate acetyl/butaryl transferase CDIF29020_RS01130 PF00871 Acetokinase family CDIF29020_RS01160 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29020_RS01160 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29020_RS01160 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29020_RS01160 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29020_RS01165 PF01380 SIS domain CDIF29020_RS01170 PF00581 Rhodanese-like domain CDIF29020_RS01180 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDIF29020_RS01185 PF08486 Stage II sporulation protein CDIF29020_RS01195 PF12116 Stage III sporulation protein D CDIF29020_RS01205 PF07977 FabA-like domain CDIF29020_RS01210 PF06866 Protein of unknown function (DUF1256) CDIF29020_RS01215 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDIF29020_RS01215 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDIF29020_RS01215 PF02772 S-adenosylmethionine synthetase, central domain CDIF29020_RS01225 PF13538 UvrD-like helicase C-terminal domain CDIF29020_RS01225 PF14490 Helix-hairpin-helix containing domain CDIF29020_RS01225 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CDIF29020_RS01235 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS01235 PF00874 PRD domain CDIF29020_RS01235 PF05043 Mga helix-turn-helix domain CDIF29020_RS01235 PF08279 HTH domain CDIF29020_RS01240 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29020_RS01245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS01250 PF02378 Phosphotransferase system, EIIC CDIF29020_RS01260 PF01112 Asparaginase CDIF29020_RS01265 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS01270 PF03932 CutC family CDIF29020_RS01275 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDIF29020_RS01275 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDIF29020_RS01280 PF02810 SEC-C motif CDIF29020_RS01280 PF07517 SecA DEAD-like domain CDIF29020_RS01280 PF01043 SecA preprotein cross-linking domain CDIF29020_RS01280 PF07516 SecA Wing and Scaffold domain CDIF29020_RS01285 PF00472 RF-1 domain CDIF29020_RS01285 PF03462 PCRF domain CDIF29020_RS01290 PF00575 S1 RNA binding domain CDIF29020_RS01290 PF17674 HHH domain CDIF29020_RS01290 PF16921 Tex protein YqgF-like domain CDIF29020_RS01290 PF09371 Tex-like protein N-terminal domain CDIF29020_RS01295 PF01979 Amidohydrolase family CDIF29020_RS01310 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDIF29020_RS01315 PF00814 Glycoprotease family CDIF29020_RS01320 PF00583 Acetyltransferase (GNAT) family CDIF29020_RS01325 PF00814 Glycoprotease family CDIF29020_RS01330 PF02901 Pyruvate formate lyase-like CDIF29020_RS01330 PF01228 Glycine radical CDIF29020_RS01335 PF18524 High potential iron-sulfur protein like CDIF29020_RS01335 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal CDIF29020_RS01340 PF04055 Radical SAM superfamily CDIF29020_RS01375 PF01554 MatE CDIF29020_RS01380 PF16326 ABC transporter C-terminal domain CDIF29020_RS01380 PF00005 ABC transporter CDIF29020_RS01380 PF12848 ABC transporter CDIF29020_RS01385 PF06971 Putative DNA-binding protein N-terminus CDIF29020_RS01385 PF02629 CoA binding domain CDIF29020_RS01395 PF12838 4Fe-4S dicluster domain CDIF29020_RS01405 PF03063 Prismane/CO dehydrogenase family CDIF29020_RS01415 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS01440 PF12323 Helix-turn-helix domain CDIF29020_RS01440 PF01385 Probable transposase CDIF29020_RS01440 PF07282 Putative transposase DNA-binding domain CDIF29020_RS01450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDIF29020_RS01450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDIF29020_RS01460 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CDIF29020_RS01460 PF00877 NlpC/P60 family CDIF29020_RS01465 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDIF29020_RS01465 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDIF29020_RS01470 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29020_RS01475 PF01180 Dihydroorotate dehydrogenase CDIF29020_RS01480 PF00156 Phosphoribosyl transferase domain CDIF29020_RS01485 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDIF29020_RS01485 PF02558 Ketopantoate reductase PanE/ApbA CDIF29020_RS01490 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS01490 PF03466 LysR substrate binding domain CDIF29020_RS01495 PF03601 Conserved hypothetical protein 698 CDIF29020_RS01505 PF13091 PLD-like domain CDIF29020_RS01505 PF13396 Phospholipase_D-nuclease N-terminal CDIF29020_RS01510 PF00166 Chaperonin 10 Kd subunit CDIF29020_RS01515 PF00118 TCP-1/cpn60 chaperonin family CDIF29020_RS01520 PF00731 AIR carboxylase CDIF29020_RS01525 PF01969 Protein of unknown function DUF111 CDIF29020_RS01530 PF01969 Protein of unknown function DUF111 CDIF29020_RS01535 PF00958 GMP synthase C terminal domain CDIF29020_RS01535 PF00117 Glutamine amidotransferase class-I CDIF29020_RS01535 PF02540 NAD synthase CDIF29020_RS01570 PF12323 Helix-turn-helix domain CDIF29020_RS01570 PF01385 Probable transposase CDIF29020_RS01570 PF07282 Putative transposase DNA-binding domain CDIF29020_RS01580 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS01600 PF17755 UvrA DNA-binding domain CDIF29020_RS01600 PF17760 UvrA interaction domain CDIF29020_RS01600 PF00005 ABC transporter CDIF29020_RS01605 PF00196 Bacterial regulatory proteins, luxR family CDIF29020_RS01605 PF00563 EAL domain CDIF29020_RS01625 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS01635 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS01650 PF00881 Nitroreductase family CDIF29020_RS01655 PF00731 AIR carboxylase CDIF29020_RS01660 PF01259 SAICAR synthetase CDIF29020_RS01665 PF00156 Phosphoribosyl transferase domain CDIF29020_RS01670 PF00586 AIR synthase related protein, N-terminal domain CDIF29020_RS01670 PF02769 AIR synthase related protein, C-terminal domain CDIF29020_RS01675 PF00551 Formyl transferase CDIF29020_RS01680 PF02142 MGS-like domain CDIF29020_RS01680 PF01808 AICARFT/IMPCHase bienzyme CDIF29020_RS01685 PF02844 Phosphoribosylglycinamide synthetase, N domain CDIF29020_RS01685 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDIF29020_RS01685 PF02843 Phosphoribosylglycinamide synthetase, C domain CDIF29020_RS01690 PF02769 AIR synthase related protein, C-terminal domain CDIF29020_RS01690 PF00586 AIR synthase related protein, N-terminal domain CDIF29020_RS01690 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDIF29020_RS01695 PF04321 RmlD substrate binding domain CDIF29020_RS01700 PF00483 Nucleotidyl transferase CDIF29020_RS01705 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDIF29020_RS01710 PF16363 GDP-mannose 4,6 dehydratase CDIF29020_RS01715 PF01464 Transglycosylase SLT domain CDIF29020_RS01725 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDIF29020_RS01750 PF02623 FliW protein CDIF29020_RS01755 PF02599 Global regulator protein family CDIF29020_RS01770 PF02465 Flagellar hook-associated protein 2 N-terminus CDIF29020_RS01770 PF07195 Flagellar hook-associated protein 2 C-terminus CDIF29020_RS01780 PF00669 Bacterial flagellin N-terminal helical region CDIF29020_RS01780 PF00700 Bacterial flagellin C-terminal helical region CDIF29020_RS01785 PF00535 Glycosyl transferase family 2 CDIF29020_RS01805 PF07478 D-ala D-ala ligase C-terminus CDIF29020_RS01805 PF01820 D-ala D-ala ligase N-terminus CDIF29020_RS01825 PF07282 Putative transposase DNA-binding domain CDIF29020_RS01825 PF01385 Probable transposase CDIF29020_RS01825 PF12323 Helix-turn-helix domain CDIF29020_RS01835 PF00183 Hsp90 protein CDIF29020_RS01840 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS01845 PF04055 Radical SAM superfamily CDIF29020_RS01850 PF12833 Helix-turn-helix domain CDIF29020_RS01860 PF01638 HxlR-like helix-turn-helix CDIF29020_RS01880 PF00158 Sigma-54 interaction domain CDIF29020_RS01880 PF00874 PRD domain CDIF29020_RS01880 PF03610 PTS system fructose IIA component CDIF29020_RS01885 PF00158 Sigma-54 interaction domain CDIF29020_RS01885 PF00874 PRD domain CDIF29020_RS01885 PF03610 PTS system fructose IIA component CDIF29020_RS01900 PF03830 PTS system sorbose subfamily IIB component CDIF29020_RS01905 PF03609 PTS system sorbose-specific iic component CDIF29020_RS01910 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29020_RS01920 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS01935 PF13396 Phospholipase_D-nuclease N-terminal CDIF29020_RS01940 PF13732 Domain of unknown function (DUF4162) CDIF29020_RS01940 PF00005 ABC transporter CDIF29020_RS01960 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29020_RS01960 PF04055 Radical SAM superfamily CDIF29020_RS01965 PF00356 Bacterial regulatory proteins, lacI family CDIF29020_RS01970 PF00294 pfkB family carbohydrate kinase CDIF29020_RS01975 PF13407 Periplasmic binding protein domain CDIF29020_RS01980 PF00005 ABC transporter CDIF29020_RS01985 PF02653 Branched-chain amino acid transport system / permease component CDIF29020_RS01990 PF07687 Peptidase dimerisation domain CDIF29020_RS01990 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS02000 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS02040 PF01022 Bacterial regulatory protein, arsR family CDIF29020_RS02045 PF00403 Heavy-metal-associated domain CDIF29020_RS02065 PF09335 SNARE associated Golgi protein CDIF29020_RS02080 PF01891 Cobalt uptake substrate-specific transmembrane region CDIF29020_RS02085 PF02553 Cobalt transport protein component CbiN CDIF29020_RS02090 PF02361 Cobalt transport protein CDIF29020_RS02095 PF00005 ABC transporter CDIF29020_RS02100 PF00580 UvrD/REP helicase N-terminal domain CDIF29020_RS02100 PF13361 UvrD-like helicase C-terminal domain CDIF29020_RS02105 PF02127 Aminopeptidase I zinc metalloprotease (M18) CDIF29020_RS02115 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDIF29020_RS02125 PF07085 DRTGG domain CDIF29020_RS02125 PF02833 DHHA2 domain CDIF29020_RS02125 PF01368 DHH family CDIF29020_RS02125 PF00571 CBS domain CDIF29020_RS02130 PF00171 Aldehyde dehydrogenase family CDIF29020_RS02130 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS02140 PF00005 ABC transporter CDIF29020_RS02175 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDIF29020_RS02175 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS02180 PF04607 Region found in RelA / SpoT proteins CDIF29020_RS02225 PF02378 Phosphotransferase system, EIIC CDIF29020_RS02225 PF00367 phosphotransferase system, EIIB CDIF29020_RS02225 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS02230 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS02235 PF00874 PRD domain CDIF29020_RS02235 PF03123 CAT RNA binding domain CDIF29020_RS02240 PF13537 Glutamine amidotransferase domain CDIF29020_RS02240 PF00733 Asparagine synthase CDIF29020_RS02255 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDIF29020_RS02255 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDIF29020_RS02260 PF02515 CoA-transferase family III CDIF29020_RS02265 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29020_RS02270 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29020_RS02275 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29020_RS02280 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29020_RS02280 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29020_RS02280 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29020_RS02285 PF01012 Electron transfer flavoprotein domain CDIF29020_RS02290 PF13237 4Fe-4S dicluster domain CDIF29020_RS02290 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29020_RS02290 PF01012 Electron transfer flavoprotein domain CDIF29020_RS02295 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS02295 PF13188 PAS domain CDIF29020_RS02295 PF00158 Sigma-54 interaction domain CDIF29020_RS02300 PF01116 Fructose-bisphosphate aldolase class-II CDIF29020_RS02310 PF01479 S4 domain CDIF29020_RS02310 PF00849 RNA pseudouridylate synthase CDIF29020_RS02315 PF05958 tRNA (Uracil-5-)-methyltransferase CDIF29020_RS02375 PF00689 Cation transporting ATPase, C-terminus CDIF29020_RS02375 PF00690 Cation transporter/ATPase, N-terminus CDIF29020_RS02380 PF00072 Response regulator receiver domain CDIF29020_RS02380 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS02395 PF00689 Cation transporting ATPase, C-terminus CDIF29020_RS02395 PF00690 Cation transporter/ATPase, N-terminus CDIF29020_RS02415 PF05336 L-rhamnose mutarotase CDIF29020_RS02435 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29020_RS02445 PF00158 Sigma-54 interaction domain CDIF29020_RS02445 PF13426 PAS domain CDIF29020_RS02445 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS02460 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS02465 PF16552 D-ornithine 4,5-aminomutase alpha-subunit CDIF29020_RS02470 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CDIF29020_RS02470 PF02310 B12 binding domain CDIF29020_RS02470 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CDIF29020_RS02475 PF13941 MutL protein CDIF29020_RS02480 PF01168 Alanine racemase, N-terminal domain CDIF29020_RS02485 PF03553 Na+/H+ antiporter family CDIF29020_RS02500 PF00293 NUDIX domain CDIF29020_RS02510 PF12833 Helix-turn-helix domain CDIF29020_RS02515 PF13538 UvrD-like helicase C-terminal domain CDIF29020_RS02520 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS02525 PF00005 ABC transporter CDIF29020_RS02535 PF00989 PAS fold CDIF29020_RS02535 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS02535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS02540 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS02540 PF00072 Response regulator receiver domain CDIF29020_RS02550 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS02560 PF00005 ABC transporter CDIF29020_RS02600 PF00082 Subtilase family CDIF29020_RS02640 PF08281 Sigma-70, region 4 CDIF29020_RS02640 PF04542 Sigma-70 region 2 CDIF29020_RS02720 PF03717 Penicillin-binding Protein dimerisation domain CDIF29020_RS02720 PF05223 NTF2-like N-terminal transpeptidase domain CDIF29020_RS02720 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS02725 PF05569 BlaR1 peptidase M56 CDIF29020_RS02725 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS02730 PF03965 Penicillinase repressor CDIF29020_RS02745 PF00005 ABC transporter CDIF29020_RS02760 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS02760 PF00072 Response regulator receiver domain CDIF29020_RS02765 PF00672 HAMP domain CDIF29020_RS02765 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS02765 PF13426 PAS domain CDIF29020_RS02765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS02770 PF02687 FtsX-like permease family CDIF29020_RS02770 PF12704 MacB-like periplasmic core domain CDIF29020_RS02770 PF00005 ABC transporter CDIF29020_RS02775 PF00005 ABC transporter CDIF29020_RS02800 PF01381 Helix-turn-helix CDIF29020_RS02820 PF02486 Replication initiation factor CDIF29020_RS02820 PF18106 Rolling Circle replication initiation protein N-terminal domain CDIF29020_RS02870 PF00877 NlpC/P60 family CDIF29020_RS02880 PF06445 GyrI-like small molecule binding domain CDIF29020_RS02880 PF12833 Helix-turn-helix domain CDIF29020_RS02885 PF04954 Siderophore-interacting protein CDIF29020_RS02885 PF08021 Siderophore-interacting FAD-binding domain CDIF29020_RS02885 PF00005 ABC transporter CDIF29020_RS02885 PF00664 ABC transporter transmembrane region CDIF29020_RS02945 PF01636 Phosphotransferase enzyme family CDIF29020_RS02950 PF00583 Acetyltransferase (GNAT) family CDIF29020_RS02955 PF04439 Streptomycin adenylyltransferase CDIF29020_RS02960 PF08241 Methyltransferase domain CDIF29020_RS02970 PF07508 Recombinase CDIF29020_RS02970 PF13408 Recombinase zinc beta ribbon domain CDIF29020_RS02980 PF00239 Resolvase, N terminal domain CDIF29020_RS02980 PF02796 Helix-turn-helix domain of resolvase CDIF29020_RS02985 PF00005 ABC transporter CDIF29020_RS02985 PF00664 ABC transporter transmembrane region CDIF29020_RS03015 PF09035 Excisionase from transposon Tn916 CDIF29020_RS03020 PF02920 DNA binding domain of tn916 integrase CDIF29020_RS03020 PF00589 Phage integrase family CDIF29020_RS03025 PF16736 Single Cache-like CDIF29020_RS03025 PF00989 PAS fold CDIF29020_RS03025 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS03025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS03030 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS03030 PF00072 Response regulator receiver domain CDIF29020_RS03035 PF00795 Carbon-nitrogen hydrolase CDIF29020_RS03040 PF00893 Small Multidrug Resistance protein CDIF29020_RS03045 PF01259 SAICAR synthetase CDIF29020_RS03050 PF00107 Zinc-binding dehydrogenase CDIF29020_RS03050 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29020_RS03060 PF03830 PTS system sorbose subfamily IIB component CDIF29020_RS03070 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29020_RS03075 PF00072 Response regulator receiver domain CDIF29020_RS03075 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS03080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS03080 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS03080 PF00989 PAS fold CDIF29020_RS03080 PF16736 Single Cache-like CDIF29020_RS03090 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29020_RS03090 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29020_RS03095 PF03610 PTS system fructose IIA component CDIF29020_RS03095 PF00158 Sigma-54 interaction domain CDIF29020_RS03095 PF00874 PRD domain CDIF29020_RS03115 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS03115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS03115 PF13493 Domain of unknown function (DUF4118) CDIF29020_RS03115 PF02702 Osmosensitive K+ channel His kinase sensor domain CDIF29020_RS03120 PF00072 Response regulator receiver domain CDIF29020_RS03120 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS03130 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS03130 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS03130 PF00563 EAL domain CDIF29020_RS03140 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS03140 PF07687 Peptidase dimerisation domain CDIF29020_RS03145 PF03806 AbgT putative transporter family CDIF29020_RS03165 PF13280 WYL domain CDIF29020_RS03165 PF08279 HTH domain CDIF29020_RS03175 PF00072 Response regulator receiver domain CDIF29020_RS03180 PF04509 CheC-like family CDIF29020_RS03185 PF03975 CheD chemotactic sensory transduction CDIF29020_RS03190 PF01584 CheW-like domain CDIF29020_RS03195 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS03195 PF00072 Response regulator receiver domain CDIF29020_RS03200 PF00672 HAMP domain CDIF29020_RS03200 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDIF29020_RS03200 PF02203 Tar ligand binding domain homologue CDIF29020_RS03205 PF01584 CheW-like domain CDIF29020_RS03205 PF02895 Signal transducing histidine kinase, homodimeric domain CDIF29020_RS03205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS03205 PF01627 Hpt domain CDIF29020_RS03205 PF07194 P2 response regulator binding domain CDIF29020_RS03210 PF01584 CheW-like domain CDIF29020_RS03215 PF03705 CheR methyltransferase, all-alpha domain CDIF29020_RS03215 PF01739 CheR methyltransferase, SAM binding domain CDIF29020_RS03220 PF00072 Response regulator receiver domain CDIF29020_RS03220 PF01339 CheB methylesterase CDIF29020_RS03230 PF02423 Ornithine cyclodeaminase/mu-crystallin family CDIF29020_RS03245 PF03965 Penicillinase repressor CDIF29020_RS03250 PF05569 BlaR1 peptidase M56 CDIF29020_RS03250 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS03270 PF13367 PrsW family intramembrane metalloprotease CDIF29020_RS03275 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDIF29020_RS03275 PF17126 RsmF rRNA methyltransferase first C-terminal domain CDIF29020_RS03275 PF01189 16S rRNA methyltransferase RsmB/F CDIF29020_RS03280 PF10502 Signal peptidase, peptidase S26 CDIF29020_RS03285 PF10502 Signal peptidase, peptidase S26 CDIF29020_RS03295 PF03129 Anticodon binding domain CDIF29020_RS03295 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29020_RS03295 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29020_RS03300 PF04960 Glutaminase CDIF29020_RS03310 PF01261 Xylose isomerase-like TIM barrel CDIF29020_RS03330 PF08331 Domain of unknown function (DUF1730) CDIF29020_RS03335 PF05362 Lon protease (S16) C-terminal proteolytic domain CDIF29020_RS03335 PF13654 AAA domain CDIF29020_RS03340 PF00730 HhH-GPD superfamily base excision DNA repair protein CDIF29020_RS03340 PF10576 Iron-sulfur binding domain of endonuclease III CDIF29020_RS03340 PF00633 Helix-hairpin-helix motif CDIF29020_RS03345 PF00588 SpoU rRNA Methylase family CDIF29020_RS03350 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29020_RS03355 PF02608 ABC transporter substrate-binding protein PnrA-like CDIF29020_RS03370 PF12323 Helix-turn-helix domain CDIF29020_RS03370 PF01385 Probable transposase CDIF29020_RS03370 PF07282 Putative transposase DNA-binding domain CDIF29020_RS03390 PF04286 Protein of unknown function (DUF445) CDIF29020_RS03390 PF04286 Protein of unknown function (DUF445) CDIF29020_RS03395 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29020_RS03395 PF02824 TGS domain CDIF29020_RS03395 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29020_RS03395 PF03129 Anticodon binding domain CDIF29020_RS03405 PF03551 Transcriptional regulator PadR-like family CDIF29020_RS03435 PF00171 Aldehyde dehydrogenase family CDIF29020_RS03440 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS03440 PF17932 Tetracyclin repressor-like, C-terminal domain CDIF29020_RS03445 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDIF29020_RS03445 PF00391 PEP-utilising enzyme, mobile domain CDIF29020_RS03455 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS03455 PF00498 FHA domain CDIF29020_RS03455 PF00563 EAL domain CDIF29020_RS03460 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS03465 PF17151 Periplasmic sensor domain CDIF29020_RS03465 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS03485 PF17854 FtsK alpha domain CDIF29020_RS03485 PF09397 Ftsk gamma domain CDIF29020_RS03485 PF01580 FtsK/SpoIIIE family CDIF29020_RS03505 PF11922 Domain of unknown function (DUF3440) CDIF29020_RS03505 PF01507 Phosphoadenosine phosphosulfate reductase family CDIF29020_RS03510 PF02195 ParB-like nuclease domain CDIF29020_RS03525 PF05067 Manganese containing catalase CDIF29020_RS03535 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDIF29020_RS03535 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDIF29020_RS03550 PF04229 GrpB protein CDIF29020_RS03550 PF13673 Acetyltransferase (GNAT) domain CDIF29020_RS03555 PF00654 Voltage gated chloride channel CDIF29020_RS03585 PF13411 MerR HTH family regulatory protein CDIF29020_RS03585 PF06445 GyrI-like small molecule binding domain CDIF29020_RS03630 PF00772 DnaB-like helicase N terminal domain CDIF29020_RS03630 PF03796 DnaB-like helicase C terminal domain CDIF29020_RS03635 PF07497 Rho termination factor, RNA-binding domain CDIF29020_RS03635 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29020_RS03650 PF13545 Crp-like helix-turn-helix domain CDIF29020_RS03650 PF00027 Cyclic nucleotide-binding domain CDIF29020_RS03710 PF00005 ABC transporter CDIF29020_RS03720 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS03720 PF07729 FCD domain CDIF29020_RS03725 PF00326 Prolyl oligopeptidase family CDIF29020_RS03725 PF07676 WD40-like Beta Propeller Repeat CDIF29020_RS03730 PF00326 Prolyl oligopeptidase family CDIF29020_RS03730 PF07676 WD40-like Beta Propeller Repeat CDIF29020_RS03740 PF00155 Aminotransferase class I and II CDIF29020_RS03740 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS03745 PF00005 ABC transporter CDIF29020_RS03760 PF00654 Voltage gated chloride channel CDIF29020_RS03780 PF01473 Putative cell wall binding repeat CDIF29020_RS03780 PF11713 Peptidase C80 family CDIF29020_RS03780 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29020_RS03780 PF12920 TcdA/TcdB pore forming domain CDIF29020_RS03780 PF12918 TcdB toxin N-terminal helical domain CDIF29020_RS03785 PF05105 Bacteriophage holin family CDIF29020_RS03800 PF11713 Peptidase C80 family CDIF29020_RS03800 PF12918 TcdB toxin N-terminal helical domain CDIF29020_RS03800 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29020_RS03800 PF12920 TcdA/TcdB pore forming domain CDIF29020_RS03800 PF01473 Putative cell wall binding repeat CDIF29020_RS03840 PF00005 ABC transporter CDIF29020_RS03845 PF00072 Response regulator receiver domain CDIF29020_RS03845 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS03850 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS03850 PF07495 Y_Y_Y domain CDIF29020_RS03850 PF00072 Response regulator receiver domain CDIF29020_RS03850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS03850 PF07494 Two component regulator propeller CDIF29020_RS03850 PF12833 Helix-turn-helix domain CDIF29020_RS03885 PF04542 Sigma-70 region 2 CDIF29020_RS03885 PF08281 Sigma-70, region 4 CDIF29020_RS03890 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS03890 PF01434 Peptidase family M41 CDIF29020_RS03890 PF17862 AAA+ lid domain CDIF29020_RS03895 PF00707 Translation initiation factor IF-3, C-terminal domain CDIF29020_RS03895 PF05198 Translation initiation factor IF-3, N-terminal domain CDIF29020_RS03900 PF01632 Ribosomal protein L35 CDIF29020_RS03905 PF00453 Ribosomal protein L20 CDIF29020_RS03935 PF01385 Probable transposase CDIF29020_RS03935 PF07282 Putative transposase DNA-binding domain CDIF29020_RS03935 PF12323 Helix-turn-helix domain CDIF29020_RS03955 PF09278 MerR, DNA binding CDIF29020_RS03955 PF00376 MerR family regulatory protein CDIF29020_RS03975 PF02386 Cation transport protein CDIF29020_RS03980 PF02080 TrkA-C domain CDIF29020_RS03980 PF02254 TrkA-N domain CDIF29020_RS03985 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDIF29020_RS03985 PF00588 SpoU rRNA Methylase family CDIF29020_RS03990 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDIF29020_RS03990 PF01409 tRNA synthetases class II core domain (F) CDIF29020_RS03995 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDIF29020_RS03995 PF03483 B3/4 domain CDIF29020_RS03995 PF03484 tRNA synthetase B5 domain CDIF29020_RS03995 PF03147 Ferredoxin-fold anticodon binding domain CDIF29020_RS03995 PF01588 Putative tRNA binding domain CDIF29020_RS04015 PF01385 Probable transposase CDIF29020_RS04015 PF12323 Helix-turn-helix domain CDIF29020_RS04015 PF07282 Putative transposase DNA-binding domain CDIF29020_RS04020 PF12392 Collagenase CDIF29020_RS04020 PF01136 Peptidase family U32 CDIF29020_RS04030 PF00293 NUDIX domain CDIF29020_RS04040 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS04040 PF05230 MASE2 domain CDIF29020_RS04045 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS04045 PF07687 Peptidase dimerisation domain CDIF29020_RS04050 PF01713 Smr domain CDIF29020_RS04050 PF00488 MutS domain V CDIF29020_RS04055 PF04463 Protein of unknown function (DUF523) CDIF29020_RS04060 PF05746 DALR anticodon binding domain CDIF29020_RS04060 PF00750 tRNA synthetases class I (R) CDIF29020_RS04060 PF03485 Arginyl tRNA synthetase N terminal domain CDIF29020_RS04085 PF03466 LysR substrate binding domain CDIF29020_RS04085 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS04090 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29020_RS04090 PF12464 Maltose acetyltransferase CDIF29020_RS04095 PF01515 Phosphate acetyl/butaryl transferase CDIF29020_RS04100 PF03063 Prismane/CO dehydrogenase family CDIF29020_RS04105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29020_RS04110 PF01268 Formate--tetrahydrofolate ligase CDIF29020_RS04115 PF04961 Formiminotransferase-cyclodeaminase CDIF29020_RS04120 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDIF29020_RS04120 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDIF29020_RS04130 PF02574 Homocysteine S-methyltransferase CDIF29020_RS04130 PF02219 Methylenetetrahydrofolate reductase CDIF29020_RS04135 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29020_RS04135 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS04145 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CDIF29020_RS04150 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CDIF29020_RS04150 PF04060 Putative Fe-S cluster CDIF29020_RS04155 PF00809 Pterin binding enzyme CDIF29020_RS04160 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CDIF29020_RS04160 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CDIF29020_RS04165 PF01597 Glycine cleavage H-protein CDIF29020_RS04180 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29020_RS04180 PF04055 Radical SAM superfamily CDIF29020_RS04185 PF03099 Biotin/lipoate A/B protein ligase family CDIF29020_RS04205 PF02811 PHP domain CDIF29020_RS04220 PF00266 Aminotransferase class-V CDIF29020_RS04220 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS04225 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29020_RS04225 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29020_RS04230 PF04346 Ethanolamine utilisation protein, EutH CDIF29020_RS04235 PF00455 DeoR C terminal sensor domain CDIF29020_RS04235 PF08220 DeoR-like helix-turn-helix domain CDIF29020_RS04245 PF01618 MotA/TolQ/ExbB proton channel family CDIF29020_RS04250 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDIF29020_RS04250 PF00691 OmpA family CDIF29020_RS04265 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS04265 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS04265 PF00563 EAL domain CDIF29020_RS04270 PF13361 UvrD-like helicase C-terminal domain CDIF29020_RS04270 PF00580 UvrD/REP helicase N-terminal domain CDIF29020_RS04275 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29020_RS04280 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS04285 PF00005 ABC transporter CDIF29020_RS04290 PF00266 Aminotransferase class-V CDIF29020_RS04295 PF02568 Thiamine biosynthesis protein (ThiI) CDIF29020_RS04295 PF02926 THUMP domain CDIF29020_RS04300 PF00114 Pilin (bacterial filament) CDIF29020_RS04300 PF07963 Prokaryotic N-terminal methylation motif CDIF29020_RS04305 PF00881 Nitroreductase family CDIF29020_RS04310 PF04055 Radical SAM superfamily CDIF29020_RS04315 PF01228 Glycine radical CDIF29020_RS04315 PF02901 Pyruvate formate lyase-like CDIF29020_RS04320 PF01699 Sodium/calcium exchanger protein CDIF29020_RS04325 PF00271 Helicase conserved C-terminal domain CDIF29020_RS04325 PF00270 DEAD/DEAH box helicase CDIF29020_RS04340 PF03608 PTS system enzyme II sorbitol-specific factor CDIF29020_RS04345 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CDIF29020_RS04345 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CDIF29020_RS04350 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CDIF29020_RS04350 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CDIF29020_RS04355 PF03829 PTS system glucitol/sorbitol-specific IIA component CDIF29020_RS04360 PF00106 short chain dehydrogenase CDIF29020_RS04365 PF00384 Molybdopterin oxidoreductase CDIF29020_RS04365 PF01568 Molydopterin dinucleotide binding domain CDIF29020_RS04365 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDIF29020_RS04370 PF01740 STAS domain CDIF29020_RS04375 PF13581 Histidine kinase-like ATPase domain CDIF29020_RS04380 PF04539 Sigma-70 region 3 CDIF29020_RS04380 PF04542 Sigma-70 region 2 CDIF29020_RS04380 PF04545 Sigma-70, region 4 CDIF29020_RS04385 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CDIF29020_RS04390 PF07451 Stage V sporulation protein AD (SpoVAD) CDIF29020_RS04400 PF00356 Bacterial regulatory proteins, lacI family CDIF29020_RS04415 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS04425 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS04425 PF00912 Transglycosylase CDIF29020_RS04435 PF17820 PDZ domain CDIF29020_RS04435 PF05580 SpoIVB peptidase S55 CDIF29020_RS04440 PF08239 Bacterial SH3 domain CDIF29020_RS04440 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS04445 PF12848 ABC transporter CDIF29020_RS04445 PF00005 ABC transporter CDIF29020_RS04460 PF01926 50S ribosome-binding GTPase CDIF29020_RS04460 PF13167 GTP-binding GTPase N-terminal CDIF29020_RS04460 PF16360 GTP-binding GTPase Middle Region CDIF29020_RS04475 PF01205 Uncharacterized protein family UPF0029 CDIF29020_RS04475 PF09186 Domain of unknown function (DUF1949) CDIF29020_RS04485 PF01925 Sulfite exporter TauE/SafE CDIF29020_RS04490 PF02540 NAD synthase CDIF29020_RS04495 PF01709 Transcriptional regulator CDIF29020_RS04500 PF00378 Enoyl-CoA hydratase/isomerase CDIF29020_RS04510 PF02515 CoA-transferase family III CDIF29020_RS04515 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29020_RS04515 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29020_RS04515 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29020_RS04520 PF01012 Electron transfer flavoprotein domain CDIF29020_RS04525 PF13237 4Fe-4S dicluster domain CDIF29020_RS04525 PF01012 Electron transfer flavoprotein domain CDIF29020_RS04525 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29020_RS04530 PF00158 Sigma-54 interaction domain CDIF29020_RS04530 PF13426 PAS domain CDIF29020_RS04530 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS04550 PF12724 Flavodoxin domain CDIF29020_RS04555 PF00563 EAL domain CDIF29020_RS04555 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS04555 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS04570 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS04570 PF07729 FCD domain CDIF29020_RS04575 PF07690 Major Facilitator Superfamily CDIF29020_RS04580 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS04580 PF00367 phosphotransferase system, EIIB CDIF29020_RS04580 PF02378 Phosphotransferase system, EIIC CDIF29020_RS04585 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS04590 PF03123 CAT RNA binding domain CDIF29020_RS04590 PF00874 PRD domain CDIF29020_RS04595 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS04595 PF00072 Response regulator receiver domain CDIF29020_RS04600 PF16736 Single Cache-like CDIF29020_RS04600 PF00989 PAS fold CDIF29020_RS04600 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS04600 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS04605 PF00005 ABC transporter CDIF29020_RS04620 PF02915 Rubrerythrin CDIF29020_RS04630 PF01880 Desulfoferrodoxin CDIF29020_RS04635 PF01645 Conserved region in glutamate synthase CDIF29020_RS04655 PF07282 Putative transposase DNA-binding domain CDIF29020_RS04655 PF01385 Probable transposase CDIF29020_RS04655 PF12323 Helix-turn-helix domain CDIF29020_RS04675 PF00270 DEAD/DEAH box helicase CDIF29020_RS04675 PF00271 Helicase conserved C-terminal domain CDIF29020_RS04680 PF00682 HMGL-like CDIF29020_RS04685 PF00330 Aconitase family (aconitate hydratase) CDIF29020_RS04690 PF18324 Hypothetical protein TT1725 CDIF29020_RS04690 PF00180 Isocitrate/isopropylmalate dehydrogenase CDIF29020_RS04695 PF01047 MarR family CDIF29020_RS04720 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDIF29020_RS04725 PF02142 MGS-like domain CDIF29020_RS04725 PF01808 AICARFT/IMPCHase bienzyme CDIF29020_RS04735 PF13439 Glycosyltransferase Family 4 CDIF29020_RS04735 PF00534 Glycosyl transferases group 1 CDIF29020_RS04770 PF12323 Helix-turn-helix domain CDIF29020_RS04770 PF01385 Probable transposase CDIF29020_RS04770 PF07282 Putative transposase DNA-binding domain CDIF29020_RS04790 PF07282 Putative transposase DNA-binding domain CDIF29020_RS04790 PF01385 Probable transposase CDIF29020_RS04790 PF12323 Helix-turn-helix domain CDIF29020_RS04800 PF01106 NifU-like domain CDIF29020_RS04815 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS04820 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS04820 PF12911 N-terminal TM domain of oligopeptide transport permease C CDIF29020_RS04825 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29020_RS04830 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29020_RS04830 PF00005 ABC transporter CDIF29020_RS04835 PF00005 ABC transporter CDIF29020_RS04835 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29020_RS04840 PF00874 PRD domain CDIF29020_RS04840 PF00158 Sigma-54 interaction domain CDIF29020_RS04840 PF03610 PTS system fructose IIA component CDIF29020_RS04850 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS04855 PF02378 Phosphotransferase system, EIIC CDIF29020_RS04865 PF02056 Family 4 glycosyl hydrolase CDIF29020_RS04865 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29020_RS04870 PF01661 Macro domain CDIF29020_RS04875 PF12146 Serine aminopeptidase, S33 CDIF29020_RS04885 PF12728 Helix-turn-helix domain CDIF29020_RS04885 PF12727 PBP superfamily domain CDIF29020_RS04895 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS04900 PF12857 TOBE-like domain CDIF29020_RS04900 PF17850 CysA C-terminal regulatory domain CDIF29020_RS04900 PF00005 ABC transporter CDIF29020_RS04905 PF12464 Maltose acetyltransferase CDIF29020_RS04905 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29020_RS04915 PF00005 ABC transporter CDIF29020_RS04920 PF02653 Branched-chain amino acid transport system / permease component CDIF29020_RS04925 PF04392 ABC transporter substrate binding protein CDIF29020_RS04930 PF00005 ABC transporter CDIF29020_RS04935 PF02653 Branched-chain amino acid transport system / permease component CDIF29020_RS04940 PF03853 YjeF-related protein N-terminus CDIF29020_RS04940 PF01256 Carbohydrate kinase CDIF29020_RS04950 PF01145 SPFH domain / Band 7 family CDIF29020_RS04955 PF00483 Nucleotidyl transferase CDIF29020_RS04960 PF00483 Nucleotidyl transferase CDIF29020_RS04965 PF00534 Glycosyl transferases group 1 CDIF29020_RS04965 PF08323 Starch synthase catalytic domain CDIF29020_RS04970 PF00343 Carbohydrate phosphorylase CDIF29020_RS04975 PF00395 S-layer homology domain CDIF29020_RS04975 PF02903 Alpha amylase, N-terminal ig-like domain CDIF29020_RS04975 PF00128 Alpha amylase, catalytic domain CDIF29020_RS04980 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS04980 PF07729 FCD domain CDIF29020_RS04985 PF01276 Orn/Lys/Arg decarboxylase, major domain CDIF29020_RS04985 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDIF29020_RS04990 PF02675 S-adenosylmethionine decarboxylase CDIF29020_RS04995 PF17284 Spermidine synthase tetramerisation domain CDIF29020_RS05000 PF00491 Arginase family CDIF29020_RS05005 PF00313 'Cold-shock' DNA-binding domain CDIF29020_RS05015 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29020_RS05015 PF13187 4Fe-4S dicluster domain CDIF29020_RS05035 PF08903 Domain of unknown function (DUF1846) CDIF29020_RS05040 PF00817 impB/mucB/samB family CDIF29020_RS05040 PF11799 impB/mucB/samB family C-terminal domain CDIF29020_RS05040 PF11798 IMS family HHH motif CDIF29020_RS05045 PF00571 CBS domain CDIF29020_RS05045 PF00005 ABC transporter CDIF29020_RS05050 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS05055 PF01545 Cation efflux family CDIF29020_RS05055 PF16916 Dimerisation domain of Zinc Transporter CDIF29020_RS05085 PF01554 MatE CDIF29020_RS05090 PF02401 LytB protein CDIF29020_RS05090 PF00575 S1 RNA binding domain CDIF29020_RS05105 PF00682 HMGL-like CDIF29020_RS05105 PF08502 LeuA allosteric (dimerisation) domain CDIF29020_RS05110 PF00330 Aconitase family (aconitate hydratase) CDIF29020_RS05115 PF00694 Aconitase C-terminal domain CDIF29020_RS05120 PF00180 Isocitrate/isopropylmalate dehydrogenase CDIF29020_RS05130 PF00266 Aminotransferase class-V CDIF29020_RS05135 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDIF29020_RS05135 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDIF29020_RS05150 PF08448 PAS fold CDIF29020_RS05150 PF08447 PAS fold CDIF29020_RS05150 PF00563 EAL domain CDIF29020_RS05150 PF13426 PAS domain CDIF29020_RS05150 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS05150 PF05231 MASE1 CDIF29020_RS05155 PF04055 Radical SAM superfamily CDIF29020_RS05155 PF11842 Domain of unknown function (DUF3362) CDIF29020_RS05155 PF08497 Radical SAM N-terminal CDIF29020_RS05170 PF00005 ABC transporter CDIF29020_RS05175 PF04073 Aminoacyl-tRNA editing domain CDIF29020_RS05180 PF05681 Fumarate hydratase (Fumerase) CDIF29020_RS05190 PF03949 Malic enzyme, NAD binding domain CDIF29020_RS05190 PF00390 Malic enzyme, N-terminal domain CDIF29020_RS05205 PF00072 Response regulator receiver domain CDIF29020_RS05205 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS05210 PF00672 HAMP domain CDIF29020_RS05210 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS05210 PF18698 Histidine kinase sensor domain CDIF29020_RS05210 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS05210 PF00989 PAS fold CDIF29020_RS05215 PF00005 ABC transporter CDIF29020_RS05215 PF12704 MacB-like periplasmic core domain CDIF29020_RS05215 PF02687 FtsX-like permease family CDIF29020_RS05230 PF07702 UTRA domain CDIF29020_RS05230 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS05235 PF01979 Amidohydrolase family CDIF29020_RS05240 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDIF29020_RS05250 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS05250 PF00072 Response regulator receiver domain CDIF29020_RS05255 PF00989 PAS fold CDIF29020_RS05255 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS05255 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS05255 PF16736 Single Cache-like CDIF29020_RS05260 PF00563 EAL domain CDIF29020_RS05260 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS05260 PF13426 PAS domain CDIF29020_RS05270 PF06445 GyrI-like small molecule binding domain CDIF29020_RS05270 PF13411 MerR HTH family regulatory protein CDIF29020_RS05275 PF00005 ABC transporter CDIF29020_RS05275 PF00664 ABC transporter transmembrane region CDIF29020_RS05280 PF00005 ABC transporter CDIF29020_RS05280 PF00664 ABC transporter transmembrane region CDIF29020_RS05310 PF08402 TOBE domain CDIF29020_RS05310 PF00005 ABC transporter CDIF29020_RS05315 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS05320 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS05325 PF13416 Bacterial extracellular solute-binding protein CDIF29020_RS05335 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CDIF29020_RS05345 PF03170 Bacterial cellulose synthase subunit CDIF29020_RS05355 PF02350 UDP-N-acetylglucosamine 2-epimerase CDIF29020_RS05360 PF01476 LysM domain CDIF29020_RS05360 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29020_RS05385 PF08239 Bacterial SH3 domain CDIF29020_RS05385 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS05390 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS05390 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS05400 PF13361 UvrD-like helicase C-terminal domain CDIF29020_RS05400 PF00580 UvrD/REP helicase N-terminal domain CDIF29020_RS05410 PF12705 PD-(D/E)XK nuclease superfamily CDIF29020_RS05415 PF00580 UvrD/REP helicase N-terminal domain CDIF29020_RS05415 PF13361 UvrD-like helicase C-terminal domain CDIF29020_RS05415 PF12705 PD-(D/E)XK nuclease superfamily CDIF29020_RS05420 PF00149 Calcineurin-like phosphoesterase CDIF29020_RS05420 PF12320 Type 5 capsule protein repressor C-terminal domain CDIF29020_RS05425 PF13175 AAA ATPase domain CDIF29020_RS05430 PF00571 CBS domain CDIF29020_RS05430 PF03471 Transporter associated domain CDIF29020_RS05430 PF01595 Cyclin M transmembrane N-terminal domain CDIF29020_RS05435 PF01594 AI-2E family transporter CDIF29020_RS05440 PF07687 Peptidase dimerisation domain CDIF29020_RS05440 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS05450 PF12850 Calcineurin-like phosphoesterase superfamily domain CDIF29020_RS05455 PF01513 ATP-NAD kinase CDIF29020_RS05460 PF00005 ABC transporter CDIF29020_RS05480 PF04073 Aminoacyl-tRNA editing domain CDIF29020_RS05485 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29020_RS05485 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29020_RS05485 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29020_RS05490 PF01012 Electron transfer flavoprotein domain CDIF29020_RS05495 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29020_RS05495 PF01012 Electron transfer flavoprotein domain CDIF29020_RS05500 PF00378 Enoyl-CoA hydratase/isomerase CDIF29020_RS05505 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDIF29020_RS05505 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDIF29020_RS05510 PF02803 Thiolase, C-terminal domain CDIF29020_RS05510 PF00108 Thiolase, N-terminal domain CDIF29020_RS05515 PF00849 RNA pseudouridylate synthase CDIF29020_RS05525 PF00550 Phosphopantetheine attachment site CDIF29020_RS05550 PF00356 Bacterial regulatory proteins, lacI family CDIF29020_RS05580 PF02811 PHP domain CDIF29020_RS05585 PF00155 Aminotransferase class I and II CDIF29020_RS05590 PF05979 Bacterial protein of unknown function (DUF896) CDIF29020_RS05595 PF02127 Aminopeptidase I zinc metalloprotease (M18) CDIF29020_RS05600 PF07702 UTRA domain CDIF29020_RS05600 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS05615 PF03830 PTS system sorbose subfamily IIB component CDIF29020_RS05620 PF03609 PTS system sorbose-specific iic component CDIF29020_RS05625 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29020_RS05630 PF03466 LysR substrate binding domain CDIF29020_RS05630 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS05640 PF00994 Probable molybdopterin binding domain CDIF29020_RS05640 PF03453 MoeA N-terminal region (domain I and II) CDIF29020_RS05640 PF03454 MoeA C-terminal region (domain IV) CDIF29020_RS05645 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDIF29020_RS05650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS05655 PF00005 ABC transporter CDIF29020_RS05655 PF00664 ABC transporter transmembrane region CDIF29020_RS05665 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS05665 PF07687 Peptidase dimerisation domain CDIF29020_RS05670 PF02535 ZIP Zinc transporter CDIF29020_RS05680 PF00072 Response regulator receiver domain CDIF29020_RS05680 PF04397 LytTr DNA-binding domain CDIF29020_RS05695 PF01228 Glycine radical CDIF29020_RS05695 PF02901 Pyruvate formate lyase-like CDIF29020_RS05700 PF04055 Radical SAM superfamily CDIF29020_RS05705 PF07883 Cupin domain CDIF29020_RS05705 PF01381 Helix-turn-helix CDIF29020_RS05730 PF12833 Helix-turn-helix domain CDIF29020_RS05730 PF06445 GyrI-like small molecule binding domain CDIF29020_RS05755 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29020_RS05765 PF00476 DNA polymerase family A CDIF29020_RS05765 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDIF29020_RS05765 PF01367 5'-3' exonuclease, C-terminal SAM fold CDIF29020_RS05770 PF01121 Dephospho-CoA kinase CDIF29020_RS05780 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29020_RS05795 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29020_RS05800 PF00877 NlpC/P60 family CDIF29020_RS05810 PF13237 4Fe-4S dicluster domain CDIF29020_RS05810 PF13375 RnfC Barrel sandwich hybrid domain CDIF29020_RS05810 PF10531 SLBB domain CDIF29020_RS05810 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29020_RS05815 PF03116 NQR2, RnfD, RnfE family CDIF29020_RS05820 PF04205 FMN-binding domain CDIF29020_RS05825 PF02508 Rnf-Nqr subunit, membrane protein CDIF29020_RS05830 PF02508 Rnf-Nqr subunit, membrane protein CDIF29020_RS05835 PF13187 4Fe-4S dicluster domain CDIF29020_RS05835 PF04060 Putative Fe-S cluster CDIF29020_RS05835 PF00037 4Fe-4S binding domain CDIF29020_RS05840 PF02545 Maf-like protein CDIF29020_RS05845 PF04002 RadC-like JAB domain CDIF29020_RS05865 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS05870 PF03775 Septum formation inhibitor MinC, C-terminal domain CDIF29020_RS05875 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29020_RS05880 PF03776 Septum formation topological specificity factor MinE CDIF29020_RS05885 PF01098 Cell cycle protein CDIF29020_RS05890 PF02142 MGS-like domain CDIF29020_RS05895 PF03551 Transcriptional regulator PadR-like family CDIF29020_RS05910 PF00258 Flavodoxin CDIF29020_RS05910 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS05925 PF00575 S1 RNA binding domain CDIF29020_RS05925 PF10150 Ribonuclease E/G family CDIF29020_RS05930 PF00829 Ribosomal prokaryotic L21 protein CDIF29020_RS05940 PF01016 Ribosomal L27 protein CDIF29020_RS05945 PF01018 GTP1/OBG CDIF29020_RS05945 PF01926 50S ribosome-binding GTPase CDIF29020_RS05945 PF09269 Domain of unknown function (DUF1967) CDIF29020_RS05955 PF03447 Homoserine dehydrogenase, NAD binding domain CDIF29020_RS05955 PF01842 ACT domain CDIF29020_RS05955 PF00742 Homoserine dehydrogenase CDIF29020_RS05965 PF07670 Nucleoside recognition CDIF29020_RS05970 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS05970 PF07729 FCD domain CDIF29020_RS05975 PF09861 Lactate racemase N-terminal domain CDIF29020_RS05980 PF01012 Electron transfer flavoprotein domain CDIF29020_RS05985 PF01012 Electron transfer flavoprotein domain CDIF29020_RS05985 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29020_RS05990 PF01565 FAD binding domain CDIF29020_RS05990 PF02913 FAD linked oxidases, C-terminal domain CDIF29020_RS05995 PF05636 HIGH Nucleotidyl Transferase CDIF29020_RS06000 PF00871 Acetokinase family CDIF29020_RS06010 PF01783 Ribosomal L32p protein family CDIF29020_RS06020 PF02504 Fatty acid synthesis protein CDIF29020_RS06025 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDIF29020_RS06025 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDIF29020_RS06030 PF03060 Nitronate monooxygenase CDIF29020_RS06035 PF00698 Acyl transferase domain CDIF29020_RS06045 PF00550 Phosphopantetheine attachment site CDIF29020_RS06050 PF02801 Beta-ketoacyl synthase, C-terminal domain CDIF29020_RS06050 PF00109 Beta-ketoacyl synthase, N-terminal domain CDIF29020_RS06055 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS06055 PF07694 5TMR of 5TMR-LYT CDIF29020_RS06060 PF00158 Sigma-54 interaction domain CDIF29020_RS06060 PF13426 PAS domain CDIF29020_RS06060 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS06070 PF07722 Peptidase C26 CDIF29020_RS06075 PF13520 Amino acid permease CDIF29020_RS06085 PF06874 Firmicute fructose-1,6-bisphosphatase CDIF29020_RS06125 PF12685 SpoIIIAH-like protein CDIF29020_RS06130 PF03780 Asp23 family, cell envelope-related function CDIF29020_RS06135 PF01029 NusB family CDIF29020_RS06140 PF00814 Glycoprotease family CDIF29020_RS06145 PF13742 OB-fold nucleic acid binding domain CDIF29020_RS06145 PF02601 Exonuclease VII, large subunit CDIF29020_RS06150 PF02609 Exonuclease VII small subunit CDIF29020_RS06155 PF00348 Polyprenyl synthetase CDIF29020_RS06160 PF02681 Divergent PAP2 family CDIF29020_RS06165 PF02779 Transketolase, pyrimidine binding domain CDIF29020_RS06165 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDIF29020_RS06165 PF02780 Transketolase, C-terminal domain CDIF29020_RS06170 PF01479 S4 domain CDIF29020_RS06170 PF01728 FtsJ-like methyltransferase CDIF29020_RS06175 PF02463 RecF/RecN/SMC N terminal domain CDIF29020_RS06185 PF00583 Acetyltransferase (GNAT) family CDIF29020_RS06190 PF00583 Acetyltransferase (GNAT) family CDIF29020_RS06195 PF05580 SpoIVB peptidase S55 CDIF29020_RS06195 PF17820 PDZ domain CDIF29020_RS06200 PF08769 Sporulation initiation factor Spo0A C terminal CDIF29020_RS06200 PF00072 Response regulator receiver domain CDIF29020_RS06215 PF00535 Glycosyl transferase family 2 CDIF29020_RS06230 PF00293 NUDIX domain CDIF29020_RS06240 PF00589 Phage integrase family CDIF29020_RS06240 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29020_RS06245 PF01676 Metalloenzyme superfamily CDIF29020_RS06250 PF01048 Phosphorylase superfamily CDIF29020_RS06255 PF02885 Glycosyl transferase family, helical bundle domain CDIF29020_RS06255 PF00591 Glycosyl transferase family, a/b domain CDIF29020_RS06255 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CDIF29020_RS06260 PF02618 YceG-like family CDIF29020_RS06265 PF01596 O-methyltransferase CDIF29020_RS06270 PF01136 Peptidase family U32 CDIF29020_RS06270 PF16325 Peptidase family U32 C-terminal domain CDIF29020_RS06275 PF03717 Penicillin-binding Protein dimerisation domain CDIF29020_RS06275 PF03793 PASTA domain CDIF29020_RS06275 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS06350 PF04892 VanZ like family CDIF29020_RS06360 PF04542 Sigma-70 region 2 CDIF29020_RS06360 PF04545 Sigma-70, region 4 CDIF29020_RS06390 PF01132 Elongation factor P (EF-P) OB domain CDIF29020_RS06390 PF08207 Elongation factor P (EF-P) KOW-like domain CDIF29020_RS06390 PF09285 Elongation factor P, C-terminal CDIF29020_RS06400 PF14622 Ribonuclease-III-like CDIF29020_RS06400 PF00035 Double-stranded RNA binding motif CDIF29020_RS06410 PF06470 SMC proteins Flexible Hinge Domain CDIF29020_RS06410 PF02463 RecF/RecN/SMC N terminal domain CDIF29020_RS06415 PF00448 SRP54-type protein, GTPase domain CDIF29020_RS06415 PF02881 SRP54-type protein, helical bundle domain CDIF29020_RS06420 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CDIF29020_RS06425 PF02978 Signal peptide binding domain CDIF29020_RS06425 PF02881 SRP54-type protein, helical bundle domain CDIF29020_RS06425 PF00448 SRP54-type protein, GTPase domain CDIF29020_RS06430 PF00886 Ribosomal protein S16 CDIF29020_RS06440 PF01782 RimM N-terminal domain CDIF29020_RS06440 PF05239 PRC-barrel domain CDIF29020_RS06445 PF01746 tRNA (Guanine-1)-methyltransferase CDIF29020_RS06450 PF01245 Ribosomal protein L19 CDIF29020_RS06455 PF01926 50S ribosome-binding GTPase CDIF29020_RS06460 PF05525 Branched-chain amino acid transport protein CDIF29020_RS06465 PF05525 Branched-chain amino acid transport protein CDIF29020_RS06470 PF00317 Ribonucleotide reductase, all-alpha domain CDIF29020_RS06470 PF03477 ATP cone domain CDIF29020_RS06470 PF02867 Ribonucleotide reductase, barrel domain CDIF29020_RS06475 PF01351 Ribonuclease HII CDIF29020_RS06480 PF01070 FMN-dependent dehydrogenase CDIF29020_RS06505 PF00005 ABC transporter CDIF29020_RS06510 PF00196 Bacterial regulatory proteins, luxR family CDIF29020_RS06510 PF00072 Response regulator receiver domain CDIF29020_RS06515 PF07730 Histidine kinase CDIF29020_RS06520 PF02021 Uncharacterised protein family UPF0102 CDIF29020_RS06525 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDIF29020_RS06525 PF01078 Magnesium chelatase, subunit ChlI CDIF29020_RS06530 PF02481 DNA recombination-mediator protein A CDIF29020_RS06530 PF17782 DprA winged helix domain CDIF29020_RS06535 PF01751 Toprim domain CDIF29020_RS06535 PF01131 DNA topoisomerase CDIF29020_RS06535 PF01396 Topoisomerase DNA binding C4 zinc finger CDIF29020_RS06540 PF08222 CodY helix-turn-helix domain CDIF29020_RS06540 PF06018 CodY GAF-like domain CDIF29020_RS06545 PF12002 MgsA AAA+ ATPase C terminal CDIF29020_RS06545 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDIF29020_RS06545 PF16193 AAA C-terminal domain CDIF29020_RS06555 PF02082 Transcriptional regulator CDIF29020_RS06560 PF00266 Aminotransferase class-V CDIF29020_RS06565 PF01592 NifU-like N terminal domain CDIF29020_RS06575 PF02272 DHHA1 domain CDIF29020_RS06575 PF01411 tRNA synthetases class II (A) CDIF29020_RS06575 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29020_RS06580 PF06135 IreB regulatory phosphoprotein CDIF29020_RS06590 PF03652 Holliday junction resolvase CDIF29020_RS06595 PF06949 Protein of unknown function (DUF1292) CDIF29020_RS06600 PF01475 Ferric uptake regulator family CDIF29020_RS06610 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS06610 PF17770 Ribonuclease J C-terminal domain CDIF29020_RS06610 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDIF29020_RS06620 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29020_RS06620 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29020_RS06630 PF02311 AraC-like ligand binding domain CDIF29020_RS06630 PF12833 Helix-turn-helix domain CDIF29020_RS06635 PF02163 Peptidase family M50 CDIF29020_RS06640 PF02616 Segregation and condensation protein ScpA CDIF29020_RS06645 PF04079 Segregation and condensation complex subunit ScpB CDIF29020_RS06665 PF00883 Cytosol aminopeptidase family, catalytic domain CDIF29020_RS06665 PF02789 Cytosol aminopeptidase family, N-terminal domain CDIF29020_RS06685 PF02146 Sir2 family CDIF29020_RS06690 PF13457 GW (Gly-Tryp) dipeptide domain CDIF29020_RS06690 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29020_RS06695 PF14579 Helix-hairpin-helix motif CDIF29020_RS06695 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29020_RS06695 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29020_RS06695 PF02811 PHP domain CDIF29020_RS06695 PF00929 Exonuclease CDIF29020_RS06695 PF11490 DNA polymerase III polC-type N-terminus II CDIF29020_RS06695 PF01336 OB-fold nucleic acid binding domain CDIF29020_RS06700 PF17384 RimP C-terminal SH3 domain CDIF29020_RS06700 PF02576 RimP N-terminal domain CDIF29020_RS06705 PF13184 NusA-like KH domain CDIF29020_RS06705 PF08529 NusA N-terminal domain CDIF29020_RS06705 PF00575 S1 RNA binding domain CDIF29020_RS06710 PF04296 Protein of unknown function (DUF448) CDIF29020_RS06715 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CDIF29020_RS06720 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS06720 PF11987 Translation-initiation factor 2 CDIF29020_RS06720 PF04760 Translation initiation factor IF-2, N-terminal region CDIF29020_RS06725 PF02033 Ribosome-binding factor A CDIF29020_RS06730 PF01368 DHH family CDIF29020_RS06730 PF02272 DHHA1 domain CDIF29020_RS06735 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDIF29020_RS06735 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDIF29020_RS06740 PF01687 Riboflavin kinase CDIF29020_RS06740 PF06574 FAD synthetase CDIF29020_RS06750 PF00312 Ribosomal protein S15 CDIF29020_RS06755 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29020_RS06760 PF03725 3' exoribonuclease family, domain 2 CDIF29020_RS06760 PF00575 S1 RNA binding domain CDIF29020_RS06760 PF01138 3' exoribonuclease family, domain 1 CDIF29020_RS06760 PF00013 KH domain CDIF29020_RS06760 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDIF29020_RS06765 PF11738 Protein of unknown function (DUF3298) CDIF29020_RS06765 PF01522 Polysaccharide deacetylase CDIF29020_RS06765 PF13739 Deacetylase PdaC CDIF29020_RS06770 PF00675 Insulinase (Peptidase family M16) CDIF29020_RS06770 PF05193 Peptidase M16 inactive domain CDIF29020_RS06775 PF05239 PRC-barrel domain CDIF29020_RS06780 PF13840 ACT domain CDIF29020_RS06780 PF00696 Amino acid kinase family CDIF29020_RS06785 PF00574 Clp protease CDIF29020_RS06790 PF09397 Ftsk gamma domain CDIF29020_RS06790 PF17854 FtsK alpha domain CDIF29020_RS06790 PF01580 FtsK/SpoIIIE family CDIF29020_RS06800 PF04055 Radical SAM superfamily CDIF29020_RS06800 PF18693 TRAM domain CDIF29020_RS06800 PF00919 Uncharacterized protein family UPF0004 CDIF29020_RS06805 PF01066 CDP-alcohol phosphatidyltransferase CDIF29020_RS06810 PF00154 recA bacterial DNA recombination protein CDIF29020_RS06815 PF01966 HD domain CDIF29020_RS06815 PF00013 KH domain CDIF29020_RS06815 PF12072 Domain of unknown function (DUF3552) CDIF29020_RS06820 PF00563 EAL domain CDIF29020_RS06820 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS06820 PF13426 PAS domain CDIF29020_RS06835 PF12323 Helix-turn-helix domain CDIF29020_RS06835 PF07282 Putative transposase DNA-binding domain CDIF29020_RS06835 PF01385 Probable transposase CDIF29020_RS06850 PF10502 Signal peptidase, peptidase S26 CDIF29020_RS06855 PF02673 Bacitracin resistance protein BacA CDIF29020_RS06865 PF00206 Lyase CDIF29020_RS06865 PF10415 Fumarase C C-terminus CDIF29020_RS06875 PF00155 Aminotransferase class I and II CDIF29020_RS06885 PF03372 Endonuclease/Exonuclease/phosphatase family CDIF29020_RS06900 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29020_RS06900 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29020_RS06905 PF03551 Transcriptional regulator PadR-like family CDIF29020_RS06925 PF00005 ABC transporter CDIF29020_RS06940 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS06940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS06955 PF00313 'Cold-shock' DNA-binding domain CDIF29020_RS06985 PF01381 Helix-turn-helix CDIF29020_RS07030 PF00877 NlpC/P60 family CDIF29020_RS07030 PF01476 LysM domain CDIF29020_RS07030 PF08239 Bacterial SH3 domain CDIF29020_RS07045 PF04865 Baseplate J-like protein CDIF29020_RS07050 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) CDIF29020_RS07080 PF01381 Helix-turn-helix CDIF29020_RS07095 PF01381 Helix-turn-helix CDIF29020_RS07100 PF07690 Major Facilitator Superfamily CDIF29020_RS07110 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29020_RS07110 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29020_RS07115 PF02080 TrkA-C domain CDIF29020_RS07115 PF03600 Citrate transporter CDIF29020_RS07120 PF03746 LamB/YcsF family CDIF29020_RS07125 PF01566 Natural resistance-associated macrophage protein CDIF29020_RS07130 PF02682 Carboxyltransferase domain, subdomain C and D CDIF29020_RS07135 PF02626 Carboxyltransferase domain, subdomain A and B CDIF29020_RS07140 PF08671 Anti-repressor SinI CDIF29020_RS07140 PF01381 Helix-turn-helix CDIF29020_RS07145 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDIF29020_RS07145 PF13378 Enolase C-terminal domain-like CDIF29020_RS07155 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDIF29020_RS07155 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CDIF29020_RS07185 PF18389 TrmO C-terminal domain CDIF29020_RS07185 PF01980 tRNA-methyltransferase O CDIF29020_RS07190 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS07190 PF07687 Peptidase dimerisation domain CDIF29020_RS07195 PF17676 LD-carboxypeptidase C-terminal domain CDIF29020_RS07195 PF02016 LD-carboxypeptidase N-terminal domain CDIF29020_RS07210 PF03009 Glycerophosphoryl diester phosphodiesterase family CDIF29020_RS07215 PF00550 Phosphopantetheine attachment site CDIF29020_RS07215 PF00501 AMP-binding enzyme CDIF29020_RS07215 PF00668 Condensation domain CDIF29020_RS07215 PF13193 AMP-binding enzyme C-terminal domain CDIF29020_RS07255 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS07255 PF00155 Aminotransferase class I and II CDIF29020_RS07260 PF01820 D-ala D-ala ligase N-terminus CDIF29020_RS07260 PF07478 D-ala D-ala ligase C-terminus CDIF29020_RS07265 PF02464 Competence-damaged protein CDIF29020_RS07265 PF18146 Damage-inducible protein CinA KH domain CDIF29020_RS07265 PF00994 Probable molybdopterin binding domain CDIF29020_RS07280 PF00158 Sigma-54 interaction domain CDIF29020_RS07280 PF13188 PAS domain CDIF29020_RS07280 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS07290 PF16199 Radical_SAM C-terminal domain CDIF29020_RS07290 PF04055 Radical SAM superfamily CDIF29020_RS07315 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29020_RS07315 PF00589 Phage integrase family CDIF29020_RS07320 PF08447 PAS fold CDIF29020_RS07320 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS07320 PF00563 EAL domain CDIF29020_RS07320 PF13426 PAS domain CDIF29020_RS07320 PF05231 MASE1 CDIF29020_RS07320 PF08448 PAS fold CDIF29020_RS07325 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS07330 PF00563 EAL domain CDIF29020_RS07330 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS07330 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS07335 PF06445 GyrI-like small molecule binding domain CDIF29020_RS07335 PF13411 MerR HTH family regulatory protein CDIF29020_RS07345 PF02308 MgtC family CDIF29020_RS07360 PF01522 Polysaccharide deacetylase CDIF29020_RS07365 PF00929 Exonuclease CDIF29020_RS07365 PF13307 Helicase C-terminal domain CDIF29020_RS07370 PF00075 RNase H CDIF29020_RS07375 PF00578 AhpC/TSA family CDIF29020_RS07375 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDIF29020_RS07390 PF04294 VanW like protein CDIF29020_RS07395 PF13188 PAS domain CDIF29020_RS07395 PF00158 Sigma-54 interaction domain CDIF29020_RS07395 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS07405 PF03788 LrgA family CDIF29020_RS07410 PF04172 LrgB-like family CDIF29020_RS07415 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29020_RS07415 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29020_RS07425 PF00188 Cysteine-rich secretory protein family CDIF29020_RS07430 PF11738 Protein of unknown function (DUF3298) CDIF29020_RS07430 PF13739 Deacetylase PdaC CDIF29020_RS07430 PF01522 Polysaccharide deacetylase CDIF29020_RS07435 PF00117 Glutamine amidotransferase class-I CDIF29020_RS07440 PF00425 chorismate binding enzyme CDIF29020_RS07440 PF04715 Anthranilate synthase component I, N terminal region CDIF29020_RS07445 PF01063 Amino-transferase class IV CDIF29020_RS07455 PF01227 GTP cyclohydrolase I CDIF29020_RS07460 PF00809 Pterin binding enzyme CDIF29020_RS07465 PF02152 Dihydroneopterin aldolase CDIF29020_RS07470 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDIF29020_RS07475 PF00793 DAHP synthetase I family CDIF29020_RS07475 PF18152 DAHP synthase ferredoxin-like domain CDIF29020_RS07480 PF01807 CHC2 zinc finger CDIF29020_RS07480 PF08275 DNA primase catalytic core, N-terminal domain CDIF29020_RS07480 PF10410 DnaB-helicase binding domain of primase CDIF29020_RS07485 PF03979 Sigma-70 factor, region 1.1 CDIF29020_RS07485 PF00140 Sigma-70 factor, region 1.2 CDIF29020_RS07485 PF04542 Sigma-70 region 2 CDIF29020_RS07485 PF04539 Sigma-70 region 3 CDIF29020_RS07485 PF04545 Sigma-70, region 4 CDIF29020_RS07490 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CDIF29020_RS07495 PF01784 NIF3 (NGG1p interacting factor 3) CDIF29020_RS07500 PF03358 NADPH-dependent FMN reductase CDIF29020_RS07520 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS07520 PF00155 Aminotransferase class I and II CDIF29020_RS07530 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS07530 PF00072 Response regulator receiver domain CDIF29020_RS07535 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS07535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS07535 PF00672 HAMP domain CDIF29020_RS07540 PF00005 ABC transporter CDIF29020_RS07540 PF02687 FtsX-like permease family CDIF29020_RS07540 PF12704 MacB-like periplasmic core domain CDIF29020_RS07555 PF00144 Beta-lactamase CDIF29020_RS07560 PF00581 Rhodanese-like domain CDIF29020_RS07560 PF17773 UPF0176 acylphosphatase like domain CDIF29020_RS07565 PF01061 ABC-2 type transporter CDIF29020_RS07570 PF00664 ABC transporter transmembrane region CDIF29020_RS07570 PF00005 ABC transporter CDIF29020_RS07575 PF00005 ABC transporter CDIF29020_RS07575 PF00664 ABC transporter transmembrane region CDIF29020_RS07580 PF02915 Rubrerythrin CDIF29020_RS07585 PF01738 Dienelactone hydrolase family CDIF29020_RS07590 PF00563 EAL domain CDIF29020_RS07590 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS07590 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS07605 PF02421 Ferrous iron transport protein B CDIF29020_RS07605 PF07670 Nucleoside recognition CDIF29020_RS07605 PF17910 FeoB cytosolic helical domain CDIF29020_RS07605 PF07664 Ferrous iron transport protein B C terminus CDIF29020_RS07625 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS07630 PF00005 ABC transporter CDIF29020_RS07660 PF00005 ABC transporter CDIF29020_RS07660 PF09383 NIL domain CDIF29020_RS07665 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS07670 PF03180 NLPA lipoprotein CDIF29020_RS07675 PF00989 PAS fold CDIF29020_RS07675 PF16736 Single Cache-like CDIF29020_RS07675 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS07675 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS07680 PF02245 Methylpurine-DNA glycosylase (MPG) CDIF29020_RS07690 PF03807 NADP oxidoreductase coenzyme F420-dependent CDIF29020_RS07690 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDIF29020_RS07695 PF06207 Protein of unknown function (DUF1002) CDIF29020_RS07705 PF04545 Sigma-70, region 4 CDIF29020_RS07705 PF04539 Sigma-70 region 3 CDIF29020_RS07705 PF04542 Sigma-70 region 2 CDIF29020_RS07705 PF00140 Sigma-70 factor, region 1.2 CDIF29020_RS07705 PF03979 Sigma-70 factor, region 1.1 CDIF29020_RS07715 PF01297 Zinc-uptake complex component A periplasmic CDIF29020_RS07720 PF00005 ABC transporter CDIF29020_RS07725 PF00950 ABC 3 transport family CDIF29020_RS07730 PF07683 Cobalamin synthesis protein cobW C-terminal domain CDIF29020_RS07730 PF02492 CobW/HypB/UreG, nucleotide-binding domain CDIF29020_RS07735 PF03773 Predicted permease CDIF29020_RS07745 PF03023 Lipid II flippase MurJ CDIF29020_RS07750 PF01791 DeoC/LacD family aldolase CDIF29020_RS07760 PF00005 ABC transporter CDIF29020_RS07770 PF01554 MatE CDIF29020_RS07785 PF04205 FMN-binding domain CDIF29020_RS07785 PF12801 4Fe-4S binding domain CDIF29020_RS07810 PF02569 Pantoate-beta-alanine ligase CDIF29020_RS07815 PF02548 Ketopantoate hydroxymethyltransferase CDIF29020_RS07825 PF13426 PAS domain CDIF29020_RS07825 PF00563 EAL domain CDIF29020_RS07825 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS07830 PF13411 MerR HTH family regulatory protein CDIF29020_RS07830 PF06445 GyrI-like small molecule binding domain CDIF29020_RS07835 PF07670 Nucleoside recognition CDIF29020_RS07835 PF07664 Ferrous iron transport protein B C terminus CDIF29020_RS07835 PF17910 FeoB cytosolic helical domain CDIF29020_RS07835 PF02421 Ferrous iron transport protein B CDIF29020_RS07855 PF01479 S4 domain CDIF29020_RS07855 PF00579 tRNA synthetases class I (W and Y) CDIF29020_RS07860 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CDIF29020_RS07860 PF01522 Polysaccharide deacetylase CDIF29020_RS07870 PF02915 Rubrerythrin CDIF29020_RS07875 PF04015 Domain of unknown function (DUF362) CDIF29020_RS07880 PF01979 Amidohydrolase family CDIF29020_RS07885 PF12704 MacB-like periplasmic core domain CDIF29020_RS07885 PF02687 FtsX-like permease family CDIF29020_RS07890 PF00005 ABC transporter CDIF29020_RS07890 PF12704 MacB-like periplasmic core domain CDIF29020_RS07890 PF02687 FtsX-like permease family CDIF29020_RS07900 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS07905 PF00072 Response regulator receiver domain CDIF29020_RS07905 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS07910 PF00005 ABC transporter CDIF29020_RS07915 PF02687 FtsX-like permease family CDIF29020_RS07930 PF00175 Oxidoreductase NAD-binding domain CDIF29020_RS07930 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29020_RS07935 PF13247 4Fe-4S dicluster domain CDIF29020_RS07935 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDIF29020_RS07935 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS07940 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS07940 PF00563 EAL domain CDIF29020_RS07940 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS07945 PF00005 ABC transporter CDIF29020_RS07950 PF02687 FtsX-like permease family CDIF29020_RS07955 PF01554 MatE CDIF29020_RS07965 PF02525 Flavodoxin-like fold CDIF29020_RS07980 PF03006 Haemolysin-III related CDIF29020_RS07990 PF13393 Histidyl-tRNA synthetase CDIF29020_RS07995 PF01634 ATP phosphoribosyltransferase CDIF29020_RS08000 PF00155 Aminotransferase class I and II CDIF29020_RS08005 PF00475 Imidazoleglycerol-phosphate dehydratase CDIF29020_RS08010 PF00117 Glutamine amidotransferase class-I CDIF29020_RS08015 PF00977 Histidine biosynthesis protein CDIF29020_RS08020 PF00977 Histidine biosynthesis protein CDIF29020_RS08025 PF01502 Phosphoribosyl-AMP cyclohydrolase CDIF29020_RS08025 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CDIF29020_RS08030 PF13520 Amino acid permease CDIF29020_RS08035 PF01522 Polysaccharide deacetylase CDIF29020_RS08045 PF04542 Sigma-70 region 2 CDIF29020_RS08045 PF08281 Sigma-70, region 4 CDIF29020_RS08050 PF11738 Protein of unknown function (DUF3298) CDIF29020_RS08050 PF13739 Deacetylase PdaC CDIF29020_RS08060 PF13478 XdhC Rossmann domain CDIF29020_RS08060 PF02625 XdhC and CoxI family CDIF29020_RS08075 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDIF29020_RS08075 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDIF29020_RS08085 PF05067 Manganese containing catalase CDIF29020_RS08090 PF03190 Protein of unknown function, DUF255 CDIF29020_RS08100 PF12146 Serine aminopeptidase, S33 CDIF29020_RS08105 PF00005 ABC transporter CDIF29020_RS08115 PF01381 Helix-turn-helix CDIF29020_RS08125 PF01476 LysM domain CDIF29020_RS08125 PF06725 3D domain CDIF29020_RS08135 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29020_RS08135 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29020_RS08135 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29020_RS08135 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29020_RS08140 PF03631 Virulence factor BrkB CDIF29020_RS08145 PF18698 Histidine kinase sensor domain CDIF29020_RS08145 PF00989 PAS fold CDIF29020_RS08145 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS08145 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS08145 PF00672 HAMP domain CDIF29020_RS08150 PF01842 ACT domain CDIF29020_RS08150 PF03447 Homoserine dehydrogenase, NAD binding domain CDIF29020_RS08150 PF00742 Homoserine dehydrogenase CDIF29020_RS08160 PF00815 Histidinol dehydrogenase CDIF29020_RS08165 PF00561 alpha/beta hydrolase fold CDIF29020_RS08180 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29020_RS08180 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29020_RS08190 PF03814 Potassium-transporting ATPase A subunit CDIF29020_RS08200 PF02669 K+-transporting ATPase, c chain CDIF29020_RS08205 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS08210 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29020_RS08220 PF00557 Metallopeptidase family M24 CDIF29020_RS08225 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CDIF29020_RS08230 PF01541 GIY-YIG catalytic domain CDIF29020_RS08235 PF08543 Phosphomethylpyrimidine kinase CDIF29020_RS08240 PF02110 Hydroxyethylthiazole kinase family CDIF29020_RS08245 PF02581 Thiamine monophosphate synthase CDIF29020_RS08250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS08260 PF00005 ABC transporter CDIF29020_RS08260 PF13732 Domain of unknown function (DUF4162) CDIF29020_RS08270 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS08275 PF00005 ABC transporter CDIF29020_RS08300 PF01979 Amidohydrolase family CDIF29020_RS08310 PF00005 ABC transporter CDIF29020_RS08315 PF12679 ABC-2 family transporter protein CDIF29020_RS08320 PF00563 EAL domain CDIF29020_RS08320 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS08320 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS08325 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS08330 PF00005 ABC transporter CDIF29020_RS08345 PF00924 Mechanosensitive ion channel CDIF29020_RS08345 PF05552 Conserved TM helix CDIF29020_RS08355 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS08355 PF00258 Flavodoxin CDIF29020_RS08370 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDIF29020_RS08370 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDIF29020_RS08375 PF13537 Glutamine amidotransferase domain CDIF29020_RS08375 PF00733 Asparagine synthase CDIF29020_RS08380 PF13180 PDZ domain CDIF29020_RS08385 PF02342 TerD domain CDIF29020_RS08390 PF02342 TerD domain CDIF29020_RS08395 PF02342 TerD domain CDIF29020_RS08400 PF00690 Cation transporter/ATPase, N-terminus CDIF29020_RS08400 PF00689 Cation transporting ATPase, C-terminus CDIF29020_RS08405 PF14266 Putative component of 'biosynthetic module' CDIF29020_RS08410 PF05816 Toxic anion resistance protein (TelA) CDIF29020_RS08440 PF05684 Protein of unknown function (DUF819) CDIF29020_RS08445 PF01244 Membrane dipeptidase (Peptidase family M19) CDIF29020_RS08450 PF01032 FecCD transport family CDIF29020_RS08455 PF01032 FecCD transport family CDIF29020_RS08460 PF00005 ABC transporter CDIF29020_RS08465 PF01497 Periplasmic binding protein CDIF29020_RS08470 PF00360 Phytochrome region CDIF29020_RS08470 PF01590 GAF domain CDIF29020_RS08470 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS08470 PF00563 EAL domain CDIF29020_RS08475 PF02342 TerD domain CDIF29020_RS08480 PF03180 NLPA lipoprotein CDIF29020_RS08485 PF03099 Biotin/lipoate A/B protein ligase family CDIF29020_RS08485 PF10437 Bacterial lipoate protein ligase C-terminus CDIF29020_RS08490 PF03553 Na+/H+ antiporter family CDIF29020_RS08500 PF02347 Glycine cleavage system P-protein CDIF29020_RS08505 PF02347 Glycine cleavage system P-protein CDIF29020_RS08515 PF06865 Pyrimidine/purine nucleoside phosphorylase CDIF29020_RS08525 PF12323 Helix-turn-helix domain CDIF29020_RS08525 PF01385 Probable transposase CDIF29020_RS08525 PF07282 Putative transposase DNA-binding domain CDIF29020_RS08555 PF01381 Helix-turn-helix CDIF29020_RS08555 PF07883 Cupin domain CDIF29020_RS08560 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS08565 PF03009 Glycerophosphoryl diester phosphodiesterase family CDIF29020_RS08580 PF00005 ABC transporter CDIF29020_RS08590 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS08590 PF00072 Response regulator receiver domain CDIF29020_RS08595 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS08595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS08610 PF01638 HxlR-like helix-turn-helix CDIF29020_RS08615 PF01470 Pyroglutamyl peptidase CDIF29020_RS08640 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS08640 PF08359 YsiA-like protein, C-terminal region CDIF29020_RS08645 PF01156 Inosine-uridine preferring nucleoside hydrolase CDIF29020_RS08675 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS08675 PF00072 Response regulator receiver domain CDIF29020_RS08680 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS08680 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS08685 PF00085 Thioredoxin CDIF29020_RS08690 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS08695 PF01022 Bacterial regulatory protein, arsR family CDIF29020_RS08710 PF03600 Citrate transporter CDIF29020_RS08715 PF01235 Sodium:alanine symporter family CDIF29020_RS08725 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDIF29020_RS08730 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDIF29020_RS08730 PF00925 GTP cyclohydrolase II CDIF29020_RS08735 PF00677 Lumazine binding domain CDIF29020_RS08740 PF01872 RibD C-terminal domain CDIF29020_RS08740 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29020_RS08745 PF00570 HRDC domain CDIF29020_RS08745 PF09382 RQC domain CDIF29020_RS08745 PF00270 DEAD/DEAH box helicase CDIF29020_RS08745 PF00271 Helicase conserved C-terminal domain CDIF29020_RS08745 PF16124 RecQ zinc-binding CDIF29020_RS08750 PF01964 Radical SAM ThiC family CDIF29020_RS08760 PF00899 ThiF family CDIF29020_RS08760 PF00581 Rhodanese-like domain CDIF29020_RS08765 PF05690 Thiazole biosynthesis protein ThiG CDIF29020_RS08780 PF03606 C4-dicarboxylate anaerobic carrier CDIF29020_RS08790 PF12804 MobA-like NTP transferase domain CDIF29020_RS08800 PF01906 Putative heavy-metal-binding CDIF29020_RS08805 PF00994 Probable molybdopterin binding domain CDIF29020_RS08810 PF06463 Molybdenum Cofactor Synthesis C CDIF29020_RS08810 PF04055 Radical SAM superfamily CDIF29020_RS08815 PF01967 MoaC family CDIF29020_RS08860 PF01553 Acyltransferase CDIF29020_RS08880 PF00589 Phage integrase family CDIF29020_RS08880 PF02920 DNA binding domain of tn916 integrase CDIF29020_RS08885 PF09035 Excisionase from transposon Tn916 CDIF29020_RS08920 PF00679 Elongation factor G C-terminus CDIF29020_RS08920 PF14492 Elongation Factor G, domain II CDIF29020_RS08920 PF03764 Elongation factor G, domain IV CDIF29020_RS08920 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS08940 PF00877 NlpC/P60 family CDIF29020_RS08970 PF02486 Replication initiation factor CDIF29020_RS08970 PF18106 Rolling Circle replication initiation protein N-terminal domain CDIF29020_RS09015 PF02690 Na+/Pi-cotransporter CDIF29020_RS09020 PF12833 Helix-turn-helix domain CDIF29020_RS09020 PF17853 GGDEF-like domain CDIF29020_RS09025 PF00142 4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family CDIF29020_RS09030 PF01497 Periplasmic binding protein CDIF29020_RS09035 PF01032 FecCD transport family CDIF29020_RS09040 PF00005 ABC transporter CDIF29020_RS09045 PF00148 Nitrogenase component 1 type Oxidoreductase CDIF29020_RS09060 PF12323 Helix-turn-helix domain CDIF29020_RS09060 PF07282 Putative transposase DNA-binding domain CDIF29020_RS09060 PF01385 Probable transposase CDIF29020_RS09075 PF10609 NUBPL iron-transfer P-loop NTPase CDIF29020_RS09085 PF02607 B12 binding domain CDIF29020_RS09085 PF02310 B12 binding domain CDIF29020_RS09090 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDIF29020_RS09100 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS09105 PF07883 Cupin domain CDIF29020_RS09105 PF01381 Helix-turn-helix CDIF29020_RS09110 PF02447 GntP family permease CDIF29020_RS09115 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS09115 PF00989 PAS fold CDIF29020_RS09115 PF13188 PAS domain CDIF29020_RS09115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS09115 PF13426 PAS domain CDIF29020_RS09120 PF00158 Sigma-54 interaction domain CDIF29020_RS09120 PF00072 Response regulator receiver domain CDIF29020_RS09120 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS09125 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29020_RS09135 PF04397 LytTr DNA-binding domain CDIF29020_RS09135 PF00072 Response regulator receiver domain CDIF29020_RS09155 PF03616 Sodium/glutamate symporter CDIF29020_RS09160 PF00962 Adenosine/AMP deaminase CDIF29020_RS09180 PF12323 Helix-turn-helix domain CDIF29020_RS09180 PF07282 Putative transposase DNA-binding domain CDIF29020_RS09180 PF01385 Probable transposase CDIF29020_RS09190 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29020_RS09195 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29020_RS09210 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS09215 PF00005 ABC transporter CDIF29020_RS09235 PF01327 Polypeptide deformylase CDIF29020_RS09265 PF11208 Protein of unknown function (DUF2992) CDIF29020_RS09270 PF06961 Protein of unknown function (DUF1294) CDIF29020_RS09285 PF00293 NUDIX domain CDIF29020_RS09295 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDIF29020_RS09295 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDIF29020_RS09310 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29020_RS09335 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29020_RS09340 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS09345 PF00005 ABC transporter CDIF29020_RS09350 PF03960 ArsC family CDIF29020_RS09360 PF02540 NAD synthase CDIF29020_RS09365 PF01170 Putative RNA methylase family UPF0020 CDIF29020_RS09365 PF02926 THUMP domain CDIF29020_RS09375 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS09375 PF00072 Response regulator receiver domain CDIF29020_RS09380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS09380 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS09380 PF00672 HAMP domain CDIF29020_RS09385 PF01416 tRNA pseudouridine synthase CDIF29020_RS09390 PF00764 Arginosuccinate synthase CDIF29020_RS09400 PF13411 MerR HTH family regulatory protein CDIF29020_RS09400 PF07739 TipAS antibiotic-recognition domain CDIF29020_RS09410 PF04239 Protein of unknown function (DUF421) CDIF29020_RS09425 PF01370 NAD dependent epimerase/dehydratase family CDIF29020_RS09445 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDIF29020_RS09445 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDIF29020_RS09445 PF13187 4Fe-4S dicluster domain CDIF29020_RS09450 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS09450 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29020_RS09455 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS09455 PF03466 LysR substrate binding domain CDIF29020_RS09460 PF02342 TerD domain CDIF29020_RS09465 PF02342 TerD domain CDIF29020_RS09470 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29020_RS09470 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29020_RS09480 PF13407 Periplasmic binding protein domain CDIF29020_RS09480 PF00356 Bacterial regulatory proteins, lacI family CDIF29020_RS09485 PF02378 Phosphotransferase system, EIIC CDIF29020_RS09485 PF00367 phosphotransferase system, EIIB CDIF29020_RS09490 PF00251 Glycosyl hydrolases family 32 N-terminal domain CDIF29020_RS09490 PF08244 Glycosyl hydrolases family 32 C terminal CDIF29020_RS09495 PF00294 pfkB family carbohydrate kinase CDIF29020_RS09505 PF07690 Major Facilitator Superfamily CDIF29020_RS09535 PF00300 Histidine phosphatase superfamily (branch 1) CDIF29020_RS09545 PF02224 Cytidylate kinase CDIF29020_RS09550 PF01553 Acyltransferase CDIF29020_RS09555 PF02401 LytB protein CDIF29020_RS09590 PF01381 Helix-turn-helix CDIF29020_RS09605 PF02486 Replication initiation factor CDIF29020_RS09605 PF18106 Rolling Circle replication initiation protein N-terminal domain CDIF29020_RS09620 PF01381 Helix-turn-helix CDIF29020_RS09655 PF00877 NlpC/P60 family CDIF29020_RS09670 PF00005 ABC transporter CDIF29020_RS09700 PF08998 Bacterial epsilon antitoxin CDIF29020_RS09705 PF06414 Zeta toxin CDIF29020_RS09715 PF00398 Ribosomal RNA adenine dimethylase CDIF29020_RS09730 PF13614 AAA domain CDIF29020_RS09780 PF00578 AhpC/TSA family CDIF29020_RS09785 PF03883 Peroxide stress protein YaaA CDIF29020_RS09790 PF00690 Cation transporter/ATPase, N-terminus CDIF29020_RS09790 PF00689 Cation transporting ATPase, C-terminus CDIF29020_RS09795 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29020_RS09800 PF04204 Homoserine O-succinyltransferase CDIF29020_RS09805 PF01047 MarR family CDIF29020_RS09810 PF17862 AAA+ lid domain CDIF29020_RS09810 PF06480 FtsH Extracellular CDIF29020_RS09810 PF01434 Peptidase family M41 CDIF29020_RS09810 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS09815 PF13493 Domain of unknown function (DUF4118) CDIF29020_RS09815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS09815 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS09815 PF02702 Osmosensitive K+ channel His kinase sensor domain CDIF29020_RS09820 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS09820 PF00072 Response regulator receiver domain CDIF29020_RS09825 PF01544 CorA-like Mg2+ transporter protein CDIF29020_RS09835 PF18152 DAHP synthase ferredoxin-like domain CDIF29020_RS09835 PF00793 DAHP synthetase I family CDIF29020_RS09840 PF01761 3-dehydroquinate synthase CDIF29020_RS09845 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDIF29020_RS09850 PF01264 Chorismate synthase CDIF29020_RS09855 PF00800 Prephenate dehydratase CDIF29020_RS09855 PF01817 Chorismate mutase type II CDIF29020_RS09860 PF08501 Shikimate dehydrogenase substrate binding domain CDIF29020_RS09865 PF01202 Shikimate kinase CDIF29020_RS09870 PF02153 Prephenate dehydrogenase CDIF29020_RS09875 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS09875 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS09875 PF00563 EAL domain CDIF29020_RS09880 PF08448 PAS fold CDIF29020_RS09880 PF00563 EAL domain CDIF29020_RS09880 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS09905 PF08241 Methyltransferase domain CDIF29020_RS09910 PF04073 Aminoacyl-tRNA editing domain CDIF29020_RS09935 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS09940 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29020_RS09995 PF13302 Acetyltransferase (GNAT) domain CDIF29020_RS10000 PF02920 DNA binding domain of tn916 integrase CDIF29020_RS10000 PF00589 Phage integrase family CDIF29020_RS10005 PF13614 AAA domain CDIF29020_RS10010 PF02195 ParB-like nuclease domain CDIF29020_RS10010 PF17762 HTH domain found in ParB protein CDIF29020_RS10045 PF01695 IstB-like ATP binding protein CDIF29020_RS10080 PF01348 Type II intron maturase CDIF29020_RS10080 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDIF29020_RS10095 PF01476 LysM domain CDIF29020_RS10095 PF00877 NlpC/P60 family CDIF29020_RS10110 PF05063 MT-A70 CDIF29020_RS10115 PF01131 DNA topoisomerase CDIF29020_RS10115 PF01751 Toprim domain CDIF29020_RS10135 PF04002 RadC-like JAB domain CDIF29020_RS10145 PF04986 Putative transposase CDIF29020_RS10145 PF14319 Transposase zinc-binding domain CDIF29020_RS10150 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29020_RS10150 PF00589 Phage integrase family CDIF29020_RS10155 PF12848 ABC transporter CDIF29020_RS10155 PF00005 ABC transporter CDIF29020_RS10160 PF04203 Sortase domain CDIF29020_RS10195 PF04439 Streptomycin adenylyltransferase CDIF29020_RS10200 PF00561 alpha/beta hydrolase fold CDIF29020_RS10220 PF01076 Plasmid recombination enzyme CDIF29020_RS10235 PF01381 Helix-turn-helix CDIF29020_RS10245 PF01807 CHC2 zinc finger CDIF29020_RS10245 PF08275 DNA primase catalytic core, N-terminal domain CDIF29020_RS10275 PF07690 Major Facilitator Superfamily CDIF29020_RS10330 PF01443 Viral (Superfamily 1) RNA helicase CDIF29020_RS10330 PF03389 MobA/MobL family CDIF29020_RS10330 PF17841 BID domain of Bartonella effector protein (Bep) CDIF29020_RS10355 PF01131 DNA topoisomerase CDIF29020_RS10355 PF01751 Toprim domain CDIF29020_RS10375 PF03432 Relaxase/Mobilisation nuclease domain CDIF29020_RS10395 PF04055 Radical SAM superfamily CDIF29020_RS10405 PF03432 Relaxase/Mobilisation nuclease domain CDIF29020_RS10415 PF04237 YjbR CDIF29020_RS10430 PF01381 Helix-turn-helix CDIF29020_RS10440 PF11799 impB/mucB/samB family C-terminal domain CDIF29020_RS10440 PF00817 impB/mucB/samB family CDIF29020_RS10445 PF01726 LexA DNA binding domain CDIF29020_RS10445 PF00717 Peptidase S24-like CDIF29020_RS10520 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS10530 PF00239 Resolvase, N terminal domain CDIF29020_RS10530 PF02796 Helix-turn-helix domain of resolvase CDIF29020_RS10540 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS10545 PF00936 BMC domain CDIF29020_RS10550 PF10662 Ethanolamine utilisation - propanediol utilisation CDIF29020_RS10555 PF03861 ANTAR domain CDIF29020_RS10555 PF00072 Response regulator receiver domain CDIF29020_RS10560 PF07568 Histidine kinase CDIF29020_RS10560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS10560 PF12282 Signal transduction histidine kinase CDIF29020_RS10565 PF06277 Ethanolamine utilisation protein EutA CDIF29020_RS10570 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CDIF29020_RS10575 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CDIF29020_RS10580 PF00936 BMC domain CDIF29020_RS10585 PF00936 BMC domain CDIF29020_RS10590 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS10590 PF00171 Aldehyde dehydrogenase family CDIF29020_RS10595 PF00936 BMC domain CDIF29020_RS10605 PF06130 Phosphate propanoyltransferase CDIF29020_RS10615 PF03319 Ethanolamine utilisation protein EutN/carboxysome CDIF29020_RS10625 PF04346 Ethanolamine utilisation protein, EutH CDIF29020_RS10630 PF06249 Ethanolamine utilisation protein EutQ CDIF29020_RS10650 PF00005 ABC transporter CDIF29020_RS10670 PF01726 LexA DNA binding domain CDIF29020_RS10670 PF00717 Peptidase S24-like CDIF29020_RS10675 PF00589 Phage integrase family CDIF29020_RS10675 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29020_RS10690 PF04232 Stage V sporulation protein S (SpoVS) CDIF29020_RS10695 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDIF29020_RS10700 PF01039 Carboxyl transferase domain CDIF29020_RS10700 PF17848 Acetyl-coA carboxylase zinc finger domain CDIF29020_RS10705 PF00289 Biotin carboxylase, N-terminal domain CDIF29020_RS10705 PF02785 Biotin carboxylase C-terminal domain CDIF29020_RS10705 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29020_RS10710 PF00364 Biotin-requiring enzyme CDIF29020_RS10730 PF02390 Putative methyltransferase CDIF29020_RS10740 PF00005 ABC transporter CDIF29020_RS10750 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS10750 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS10755 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29020_RS10755 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29020_RS10760 PF13302 Acetyltransferase (GNAT) domain CDIF29020_RS10765 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS10765 PF03466 LysR substrate binding domain CDIF29020_RS10780 PF12704 MacB-like periplasmic core domain CDIF29020_RS10780 PF02687 FtsX-like permease family CDIF29020_RS10780 PF00005 ABC transporter CDIF29020_RS10785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS10785 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS10790 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS10790 PF00072 Response regulator receiver domain CDIF29020_RS10795 PF12838 4Fe-4S dicluster domain CDIF29020_RS10795 PF13486 Reductive dehalogenase subunit CDIF29020_RS10800 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS10800 PF00072 Response regulator receiver domain CDIF29020_RS10805 PF16736 Single Cache-like CDIF29020_RS10805 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS10805 PF00989 PAS fold CDIF29020_RS10805 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS10810 PF02687 FtsX-like permease family CDIF29020_RS10810 PF12704 MacB-like periplasmic core domain CDIF29020_RS10810 PF00005 ABC transporter CDIF29020_RS10850 PF04474 Protein of unknown function (DUF554) CDIF29020_RS10855 PF04073 Aminoacyl-tRNA editing domain CDIF29020_RS10870 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS10875 PF06838 Methionine gamma-lyase CDIF29020_RS10880 PF17209 Hfq protein CDIF29020_RS10890 PF08676 MutL C terminal dimerisation domain CDIF29020_RS10890 PF01119 DNA mismatch repair protein, C-terminal domain CDIF29020_RS10895 PF05188 MutS domain II CDIF29020_RS10895 PF01624 MutS domain I CDIF29020_RS10895 PF00488 MutS domain V CDIF29020_RS10895 PF05190 MutS family domain IV CDIF29020_RS10895 PF05192 MutS domain III CDIF29020_RS10900 PF00005 ABC transporter CDIF29020_RS10905 PF09084 NMT1/THI5 like CDIF29020_RS10910 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS10930 PF01638 HxlR-like helix-turn-helix CDIF29020_RS10935 PF02567 Phenazine biosynthesis-like protein CDIF29020_RS10940 PF00293 NUDIX domain CDIF29020_RS10955 PF04055 Radical SAM superfamily CDIF29020_RS10955 PF01938 TRAM domain CDIF29020_RS10955 PF00919 Uncharacterized protein family UPF0004 CDIF29020_RS10960 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS10960 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS10970 PF17099 Tryptophan transporter TrpP CDIF29020_RS11110 PF01925 Sulfite exporter TauE/SafE CDIF29020_RS11115 PF12833 Helix-turn-helix domain CDIF29020_RS11120 PF01325 Iron dependent repressor, N-terminal DNA binding domain CDIF29020_RS11120 PF02742 Iron dependent repressor, metal binding and dimerisation domain CDIF29020_RS11125 PF13411 MerR HTH family regulatory protein CDIF29020_RS11130 PF03328 HpcH/HpaI aldolase/citrate lyase family CDIF29020_RS11135 PF00258 Flavodoxin CDIF29020_RS11140 PF00082 Subtilase family CDIF29020_RS11145 PF00561 alpha/beta hydrolase fold CDIF29020_RS11150 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS11150 PF18665 Tetracyclin repressor-like, C-terminal domain CDIF29020_RS11155 PF00920 Dehydratase family CDIF29020_RS11165 PF04892 VanZ like family CDIF29020_RS11185 PF12833 Helix-turn-helix domain CDIF29020_RS11190 PF07690 Major Facilitator Superfamily CDIF29020_RS11195 PF07724 AAA domain (Cdc48 subfamily) CDIF29020_RS11195 PF17871 AAA lid domain CDIF29020_RS11195 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29020_RS11195 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29020_RS11195 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS11210 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS11215 PF00005 ABC transporter CDIF29020_RS11230 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS11230 PF07687 Peptidase dimerisation domain CDIF29020_RS11235 PF01177 Asp/Glu/Hydantoin racemase CDIF29020_RS11245 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDIF29020_RS11245 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDIF29020_RS11250 PF00202 Aminotransferase class-III CDIF29020_RS11255 PF00696 Amino acid kinase family CDIF29020_RS11260 PF01960 ArgJ family CDIF29020_RS11265 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDIF29020_RS11265 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDIF29020_RS11270 PF14268 YoaP-like CDIF29020_RS11270 PF00583 Acetyltransferase (GNAT) family CDIF29020_RS11280 PF13305 Tetracyclin repressor-like, C-terminal domain CDIF29020_RS11280 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS11300 PF13443 Cro/C1-type HTH DNA-binding domain CDIF29020_RS11325 PF01418 Helix-turn-helix domain, rpiR family CDIF29020_RS11325 PF01380 SIS domain CDIF29020_RS11330 PF06962 Putative rRNA methylase CDIF29020_RS11335 PF01479 S4 domain CDIF29020_RS11335 PF00849 RNA pseudouridylate synthase CDIF29020_RS11340 PF01594 AI-2E family transporter CDIF29020_RS11350 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDIF29020_RS11350 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDIF29020_RS11355 PF00696 Amino acid kinase family CDIF29020_RS11355 PF13840 ACT domain CDIF29020_RS11355 PF01842 ACT domain CDIF29020_RS11385 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDIF29020_RS11385 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDIF29020_RS11390 PF00781 Diacylglycerol kinase catalytic domain CDIF29020_RS11420 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29020_RS11420 PF00589 Phage integrase family CDIF29020_RS11430 PF00005 ABC transporter CDIF29020_RS11430 PF12848 ABC transporter CDIF29020_RS11455 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29020_RS11455 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29020_RS11455 PF01799 [2Fe-2S] binding domain CDIF29020_RS11465 PF00860 Permease family CDIF29020_RS11480 PF01180 Dihydroorotate dehydrogenase CDIF29020_RS11485 PF01979 Amidohydrolase family CDIF29020_RS11490 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29020_RS11490 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29020_RS11500 PF01799 [2Fe-2S] binding domain CDIF29020_RS11500 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29020_RS11505 PF01979 Amidohydrolase family CDIF29020_RS11510 PF01979 Amidohydrolase family CDIF29020_RS11515 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS11515 PF07687 Peptidase dimerisation domain CDIF29020_RS11520 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS11530 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29020_RS11530 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29020_RS11535 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29020_RS11535 PF01799 [2Fe-2S] binding domain CDIF29020_RS11540 PF01979 Amidohydrolase family CDIF29020_RS11545 PF00860 Permease family CDIF29020_RS11550 PF00860 Permease family CDIF29020_RS11555 PF00158 Sigma-54 interaction domain CDIF29020_RS11555 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS11555 PF13188 PAS domain CDIF29020_RS11565 PF07728 AAA domain (dynein-related subfamily) CDIF29020_RS11565 PF12102 Domain of unknown function (DUF3578) CDIF29020_RS11580 PF06177 QueT transporter CDIF29020_RS11590 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29020_RS11590 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29020_RS11590 PF01799 [2Fe-2S] binding domain CDIF29020_RS11595 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29020_RS11595 PF01799 [2Fe-2S] binding domain CDIF29020_RS11605 PF00999 Sodium/hydrogen exchanger family CDIF29020_RS11625 PF00005 ABC transporter CDIF29020_RS11630 PF00271 Helicase conserved C-terminal domain CDIF29020_RS11630 PF00270 DEAD/DEAH box helicase CDIF29020_RS11635 PF00860 Permease family CDIF29020_RS11640 PF01554 MatE CDIF29020_RS11650 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29020_RS11655 PF08220 DeoR-like helix-turn-helix domain CDIF29020_RS11655 PF00455 DeoR C terminal sensor domain CDIF29020_RS11665 PF13426 PAS domain CDIF29020_RS11665 PF00672 HAMP domain CDIF29020_RS11665 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS11665 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS11670 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS11670 PF00072 Response regulator receiver domain CDIF29020_RS11675 PF00403 Heavy-metal-associated domain CDIF29020_RS11690 PF00679 Elongation factor G C-terminus CDIF29020_RS11690 PF14492 Elongation Factor G, domain II CDIF29020_RS11690 PF03144 Elongation factor Tu domain 2 CDIF29020_RS11690 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS11695 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS11700 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS11700 PF14821 Threonine synthase N terminus CDIF29020_RS11705 PF08544 GHMP kinases C terminal CDIF29020_RS11705 PF00288 GHMP kinases N terminal domain CDIF29020_RS11735 PF00583 Acetyltransferase (GNAT) family CDIF29020_RS11760 PF04551 GcpE protein CDIF29020_RS11765 PF02163 Peptidase family M50 CDIF29020_RS11765 PF17820 PDZ domain CDIF29020_RS11770 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDIF29020_RS11770 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDIF29020_RS11770 PF13288 DXP reductoisomerase C-terminal domain CDIF29020_RS11780 PF09827 CRISPR associated protein Cas2 CDIF29020_RS11785 PF01867 CRISPR associated protein Cas1 CDIF29020_RS11830 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS11830 PF00563 EAL domain CDIF29020_RS11830 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS11855 PF01255 Putative undecaprenyl diphosphate synthase CDIF29020_RS11865 PF01765 Ribosome recycling factor CDIF29020_RS11870 PF00696 Amino acid kinase family CDIF29020_RS11875 PF00889 Elongation factor TS CDIF29020_RS11880 PF00318 Ribosomal protein S2 CDIF29020_RS11885 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29020_RS11885 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29020_RS11905 PF01713 Smr domain CDIF29020_RS11905 PF00488 MutS domain V CDIF29020_RS11910 PF01139 tRNA-splicing ligase RtcB CDIF29020_RS11920 PF04294 VanW like protein CDIF29020_RS11940 PF05343 M42 glutamyl aminopeptidase CDIF29020_RS11950 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDIF29020_RS11950 PF01926 50S ribosome-binding GTPase CDIF29020_RS11955 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29020_RS11955 PF04055 Radical SAM superfamily CDIF29020_RS11970 PF00202 Aminotransferase class-III CDIF29020_RS11980 PF04892 VanZ like family CDIF29020_RS11995 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29020_RS11995 PF01411 tRNA synthetases class II (A) CDIF29020_RS11995 PF02272 DHHA1 domain CDIF29020_RS12000 PF00056 lactate/malate dehydrogenase, NAD binding domain CDIF29020_RS12000 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDIF29020_RS12010 PF01625 Peptide methionine sulfoxide reductase CDIF29020_RS12010 PF01641 SelR domain CDIF29020_RS12015 PF01734 Patatin-like phospholipase CDIF29020_RS12020 PF03063 Prismane/CO dehydrogenase family CDIF29020_RS12040 PF00005 ABC transporter CDIF29020_RS12045 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS12045 PF07687 Peptidase dimerisation domain CDIF29020_RS12050 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29020_RS12055 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS12060 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS12065 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29020_RS12070 PF13247 4Fe-4S dicluster domain CDIF29020_RS12070 PF12800 4Fe-4S binding domain CDIF29020_RS12075 PF01568 Molydopterin dinucleotide binding domain CDIF29020_RS12075 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDIF29020_RS12075 PF00384 Molybdopterin oxidoreductase CDIF29020_RS12075 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDIF29020_RS12080 PF04434 SWIM zinc finger CDIF29020_RS12080 PF00176 SNF2 family N-terminal domain CDIF29020_RS12080 PF00271 Helicase conserved C-terminal domain CDIF29020_RS12085 PF00561 alpha/beta hydrolase fold CDIF29020_RS12090 PF03880 DbpA RNA binding domain CDIF29020_RS12090 PF00270 DEAD/DEAH box helicase CDIF29020_RS12090 PF00271 Helicase conserved C-terminal domain CDIF29020_RS12110 PF13457 GW (Gly-Tryp) dipeptide domain CDIF29020_RS12110 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29020_RS12115 PF03633 Glycosyl hydrolase family 65, C-terminal domain CDIF29020_RS12115 PF03632 Glycosyl hydrolase family 65 central catalytic domain CDIF29020_RS12115 PF03636 Glycosyl hydrolase family 65, N-terminal domain CDIF29020_RS12120 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS12125 PF12323 Helix-turn-helix domain CDIF29020_RS12125 PF01385 Probable transposase CDIF29020_RS12125 PF07282 Putative transposase DNA-binding domain CDIF29020_RS12140 PF02903 Alpha amylase, N-terminal ig-like domain CDIF29020_RS12140 PF16657 Maltogenic Amylase, C-terminal domain CDIF29020_RS12140 PF00128 Alpha amylase, catalytic domain CDIF29020_RS12145 PF02811 PHP domain CDIF29020_RS12160 PF00480 ROK family CDIF29020_RS12165 PF00210 Ferritin-like domain CDIF29020_RS12170 PF13380 CoA binding domain CDIF29020_RS12170 PF13607 Succinyl-CoA ligase like flavodoxin domain CDIF29020_RS12185 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29020_RS12185 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29020_RS12185 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29020_RS12195 PF00155 Aminotransferase class I and II CDIF29020_RS12210 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS12215 PF00756 Putative esterase CDIF29020_RS12220 PF01594 AI-2E family transporter CDIF29020_RS12225 PF00171 Aldehyde dehydrogenase family CDIF29020_RS12240 PF01926 50S ribosome-binding GTPase CDIF29020_RS12240 PF13167 GTP-binding GTPase N-terminal CDIF29020_RS12240 PF16360 GTP-binding GTPase Middle Region CDIF29020_RS12245 PF00005 ABC transporter CDIF29020_RS12245 PF00664 ABC transporter transmembrane region CDIF29020_RS12250 PF00664 ABC transporter transmembrane region CDIF29020_RS12250 PF00005 ABC transporter CDIF29020_RS12265 PF00484 Carbonic anhydrase CDIF29020_RS12285 PF01487 Type I 3-dehydroquinase CDIF29020_RS12290 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29020_RS12295 PF04055 Radical SAM superfamily CDIF29020_RS12295 PF00919 Uncharacterized protein family UPF0004 CDIF29020_RS12295 PF01938 TRAM domain CDIF29020_RS12310 PF01226 Formate/nitrite transporter CDIF29020_RS12315 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDIF29020_RS12315 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDIF29020_RS12315 PF13187 4Fe-4S dicluster domain CDIF29020_RS12320 PF00175 Oxidoreductase NAD-binding domain CDIF29020_RS12320 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29020_RS12325 PF17179 4Fe-4S dicluster domain CDIF29020_RS12330 PF00027 Cyclic nucleotide-binding domain CDIF29020_RS12330 PF13545 Crp-like helix-turn-helix domain CDIF29020_RS12335 PF01418 Helix-turn-helix domain, rpiR family CDIF29020_RS12335 PF01380 SIS domain CDIF29020_RS12340 PF00480 ROK family CDIF29020_RS12355 PF00474 Sodium:solute symporter family CDIF29020_RS12360 PF00701 Dihydrodipicolinate synthetase family CDIF29020_RS12365 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CDIF29020_RS12380 PF00360 Phytochrome region CDIF29020_RS12380 PF00563 EAL domain CDIF29020_RS12380 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS12380 PF01590 GAF domain CDIF29020_RS12385 PF01336 OB-fold nucleic acid binding domain CDIF29020_RS12385 PF00152 tRNA synthetases class II (D, K and N) CDIF29020_RS12395 PF00082 Subtilase family CDIF29020_RS12395 PF06280 Fn3-like domain CDIF29020_RS12395 PF02225 PA domain CDIF29020_RS12400 PF00082 Subtilase family CDIF29020_RS12410 PF06480 FtsH Extracellular CDIF29020_RS12410 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS12410 PF17862 AAA+ lid domain CDIF29020_RS12410 PF01434 Peptidase family M41 CDIF29020_RS12425 PF12544 Lysine-2,3-aminomutase CDIF29020_RS12425 PF04055 Radical SAM superfamily CDIF29020_RS12455 PF07883 Cupin domain CDIF29020_RS12460 PF00854 POT family CDIF29020_RS12465 PF01321 Creatinase/Prolidase N-terminal domain CDIF29020_RS12465 PF00557 Metallopeptidase family M24 CDIF29020_RS12470 PF00854 POT family CDIF29020_RS12490 PF00355 Rieske [2Fe-2S] domain CDIF29020_RS12490 PF01266 FAD dependent oxidoreductase CDIF29020_RS12500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS12500 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS12505 PF00294 pfkB family carbohydrate kinase CDIF29020_RS12510 PF00874 PRD domain CDIF29020_RS12510 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS12510 PF05043 Mga helix-turn-helix domain CDIF29020_RS12510 PF08279 HTH domain CDIF29020_RS12515 PF13350 Tyrosine phosphatase family CDIF29020_RS12520 PF01594 AI-2E family transporter CDIF29020_RS12530 PF01131 DNA topoisomerase CDIF29020_RS12530 PF01751 Toprim domain CDIF29020_RS12535 PF01235 Sodium:alanine symporter family CDIF29020_RS12540 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29020_RS12545 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29020_RS12550 PF00107 Zinc-binding dehydrogenase CDIF29020_RS12550 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29020_RS12555 PF03611 PTS system sugar-specific permease component CDIF29020_RS12560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS12565 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS12565 PF02378 Phosphotransferase system, EIIC CDIF29020_RS12565 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS12570 PF03610 PTS system fructose IIA component CDIF29020_RS12570 PF00158 Sigma-54 interaction domain CDIF29020_RS12570 PF00874 PRD domain CDIF29020_RS12590 PF00155 Aminotransferase class I and II CDIF29020_RS12590 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS12595 PF03591 AzlC protein CDIF29020_RS12605 PF00989 PAS fold CDIF29020_RS12605 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS12605 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS12605 PF16736 Single Cache-like CDIF29020_RS12615 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS12615 PF00072 Response regulator receiver domain CDIF29020_RS12665 PF01381 Helix-turn-helix CDIF29020_RS12675 PF00313 'Cold-shock' DNA-binding domain CDIF29020_RS12685 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS12690 PF08402 TOBE domain CDIF29020_RS12690 PF00005 ABC transporter CDIF29020_RS12705 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS12705 PF00072 Response regulator receiver domain CDIF29020_RS12710 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS12710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS12715 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29020_RS12715 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29020_RS12715 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29020_RS12715 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29020_RS12720 PF00834 Ribulose-phosphate 3 epimerase family CDIF29020_RS12725 PF02502 Ribose/Galactose Isomerase CDIF29020_RS12730 PF02779 Transketolase, pyrimidine binding domain CDIF29020_RS12730 PF02780 Transketolase, C-terminal domain CDIF29020_RS12735 PF00456 Transketolase, thiamine diphosphate binding domain CDIF29020_RS12740 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29020_RS12740 PF00107 Zinc-binding dehydrogenase CDIF29020_RS12745 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29020_RS12745 PF00107 Zinc-binding dehydrogenase CDIF29020_RS12750 PF03611 PTS system sugar-specific permease component CDIF29020_RS12755 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS12765 PF00874 PRD domain CDIF29020_RS12765 PF03610 PTS system fructose IIA component CDIF29020_RS12765 PF00158 Sigma-54 interaction domain CDIF29020_RS12770 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29020_RS12775 PF00156 Phosphoribosyl transferase domain CDIF29020_RS12780 PF01232 Mannitol dehydrogenase Rossmann domain CDIF29020_RS12780 PF08125 Mannitol dehydrogenase C-terminal domain CDIF29020_RS12785 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS12790 PF00874 PRD domain CDIF29020_RS12790 PF05043 Mga helix-turn-helix domain CDIF29020_RS12790 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS12790 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS12790 PF08279 HTH domain CDIF29020_RS12795 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS12795 PF02378 Phosphotransferase system, EIIC CDIF29020_RS12800 PF00478 IMP dehydrogenase / GMP reductase domain CDIF29020_RS12800 PF00571 CBS domain CDIF29020_RS12805 PF05816 Toxic anion resistance protein (TelA) CDIF29020_RS12815 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS12820 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDIF29020_RS12820 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDIF29020_RS12830 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CDIF29020_RS12830 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CDIF29020_RS12835 PF00171 Aldehyde dehydrogenase family CDIF29020_RS12840 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDIF29020_RS12840 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDIF29020_RS12845 PF06826 Predicted Permease Membrane Region CDIF29020_RS12845 PF02080 TrkA-C domain CDIF29020_RS12845 PF06826 Predicted Permease Membrane Region CDIF29020_RS12845 PF02080 TrkA-C domain CDIF29020_RS12850 PF03466 LysR substrate binding domain CDIF29020_RS12850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS12860 PF00557 Metallopeptidase family M24 CDIF29020_RS12860 PF01321 Creatinase/Prolidase N-terminal domain CDIF29020_RS12865 PF02504 Fatty acid synthesis protein CDIF29020_RS12870 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDIF29020_RS12885 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29020_RS12890 PF00085 Thioredoxin CDIF29020_RS12895 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS12925 PF00005 ABC transporter CDIF29020_RS12935 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS12975 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDIF29020_RS12975 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDIF29020_RS12980 PF00890 FAD binding domain CDIF29020_RS12985 PF02445 Quinolinate synthetase A protein CDIF29020_RS12990 PF02554 Carbon starvation protein CstA CDIF29020_RS13005 PF01594 AI-2E family transporter CDIF29020_RS13010 PF00293 NUDIX domain CDIF29020_RS13020 PF00871 Acetokinase family CDIF29020_RS13040 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS13040 PF13426 PAS domain CDIF29020_RS13040 PF00158 Sigma-54 interaction domain CDIF29020_RS13045 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS13050 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS13065 PF01070 FMN-dependent dehydrogenase CDIF29020_RS13080 PF03965 Penicillinase repressor CDIF29020_RS13095 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS13095 PF05569 BlaR1 peptidase M56 CDIF29020_RS13100 PF03965 Penicillinase repressor CDIF29020_RS13110 PF03484 tRNA synthetase B5 domain CDIF29020_RS13110 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDIF29020_RS13110 PF01588 Putative tRNA binding domain CDIF29020_RS13110 PF03147 Ferredoxin-fold anticodon binding domain CDIF29020_RS13110 PF03483 B3/4 domain CDIF29020_RS13115 PF00912 Transglycosylase CDIF29020_RS13120 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29020_RS13120 PF00929 Exonuclease CDIF29020_RS13120 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29020_RS13120 PF02811 PHP domain CDIF29020_RS13120 PF14579 Helix-hairpin-helix motif CDIF29020_RS13140 PF01171 PP-loop family CDIF29020_RS13155 PF05067 Manganese containing catalase CDIF29020_RS13160 PF01476 LysM domain CDIF29020_RS13160 PF00877 NlpC/P60 family CDIF29020_RS13160 PF08239 Bacterial SH3 domain CDIF29020_RS13165 PF00692 dUTPase CDIF29020_RS13170 PF01751 Toprim domain CDIF29020_RS13170 PF01131 DNA topoisomerase CDIF29020_RS13185 PF00873 AcrB/AcrD/AcrF family CDIF29020_RS13200 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDIF29020_RS13200 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29020_RS13200 PF00391 PEP-utilising enzyme, mobile domain CDIF29020_RS13205 PF03618 Kinase/pyrophosphorylase CDIF29020_RS13210 PF00571 CBS domain CDIF29020_RS13210 PF08279 HTH domain CDIF29020_RS13220 PF03829 PTS system glucitol/sorbitol-specific IIA component CDIF29020_RS13230 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS13230 PF00874 PRD domain CDIF29020_RS13230 PF05043 Mga helix-turn-helix domain CDIF29020_RS13230 PF08279 HTH domain CDIF29020_RS13235 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CDIF29020_RS13235 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CDIF29020_RS13240 PF03608 PTS system enzyme II sorbitol-specific factor CDIF29020_RS13245 PF12833 Helix-turn-helix domain CDIF29020_RS13255 PF03606 C4-dicarboxylate anaerobic carrier CDIF29020_RS13260 PF07687 Peptidase dimerisation domain CDIF29020_RS13260 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS13265 PF01235 Sodium:alanine symporter family CDIF29020_RS13270 PF07690 Major Facilitator Superfamily CDIF29020_RS13275 PF00155 Aminotransferase class I and II CDIF29020_RS13280 PF01515 Phosphate acetyl/butaryl transferase CDIF29020_RS13285 PF00871 Acetokinase family CDIF29020_RS13300 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29020_RS13300 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29020_RS13300 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29020_RS13310 PF09339 IclR helix-turn-helix domain CDIF29020_RS13310 PF01614 Bacterial transcriptional regulator CDIF29020_RS13320 PF05746 DALR anticodon binding domain CDIF29020_RS13320 PF02092 Glycyl-tRNA synthetase beta subunit CDIF29020_RS13325 PF02091 Glycyl-tRNA synthetase alpha subunit CDIF29020_RS13335 PF02565 Recombination protein O C terminal CDIF29020_RS13335 PF11967 Recombination protein O N terminal CDIF29020_RS13345 PF00571 CBS domain CDIF29020_RS13345 PF03448 MgtE intracellular N domain CDIF29020_RS13345 PF01769 Divalent cation transporter CDIF29020_RS13350 PF01926 50S ribosome-binding GTPase CDIF29020_RS13350 PF07650 KH domain CDIF29020_RS13355 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29020_RS13360 PF01219 Prokaryotic diacylglycerol kinase CDIF29020_RS13365 PF02130 Uncharacterized protein family UPF0054 CDIF29020_RS13370 PF02562 PhoH-like protein CDIF29020_RS13385 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDIF29020_RS13385 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDIF29020_RS13390 PF03073 TspO/MBR family CDIF29020_RS13395 PF09424 Yqey-like protein CDIF29020_RS13400 PF01165 Ribosomal protein S21 CDIF29020_RS13405 PF01230 HIT domain CDIF29020_RS13410 PF04055 Radical SAM superfamily CDIF29020_RS13410 PF00919 Uncharacterized protein family UPF0004 CDIF29020_RS13410 PF01938 TRAM domain CDIF29020_RS13415 PF04452 RNA methyltransferase CDIF29020_RS13425 PF00270 DEAD/DEAH box helicase CDIF29020_RS13425 PF18395 Cas3 C-terminal domain CDIF29020_RS13425 PF18019 HD domain CDIF29020_RS13450 PF03459 TOBE domain CDIF29020_RS13450 PF00005 ABC transporter CDIF29020_RS13450 PF17912 MalK OB fold domain CDIF29020_RS13455 PF17853 GGDEF-like domain CDIF29020_RS13455 PF13556 PucR C-terminal helix-turn-helix domain CDIF29020_RS13455 PF07905 Purine catabolism regulatory protein-like family CDIF29020_RS13460 PF07690 Major Facilitator Superfamily CDIF29020_RS13465 PF00480 ROK family CDIF29020_RS13475 PF01556 DnaJ C terminal domain CDIF29020_RS13475 PF00684 DnaJ central domain CDIF29020_RS13475 PF00226 DnaJ domain CDIF29020_RS13480 PF00012 Hsp70 protein CDIF29020_RS13485 PF01025 GrpE CDIF29020_RS13490 PF01628 HrcA protein C terminal domain CDIF29020_RS13495 PF06969 HemN C-terminal domain CDIF29020_RS13495 PF04055 Radical SAM superfamily CDIF29020_RS13500 PF13520 Amino acid permease CDIF29020_RS13505 PF13735 tRNA nucleotidyltransferase domain 2 putative CDIF29020_RS13505 PF12627 Probable RNA and SrmB- binding site of polymerase A CDIF29020_RS13505 PF01743 Poly A polymerase head domain CDIF29020_RS13510 PF00679 Elongation factor G C-terminus CDIF29020_RS13510 PF06421 GTP-binding protein LepA C-terminus CDIF29020_RS13510 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS13510 PF03144 Elongation factor Tu domain 2 CDIF29020_RS13525 PF03418 Germination protease CDIF29020_RS13535 PF01649 Ribosomal protein S20 CDIF29020_RS13545 PF13567 Domain of unknown function (DUF4131) CDIF29020_RS13545 PF03772 Competence protein CDIF29020_RS13545 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS13560 PF03772 Competence protein CDIF29020_RS13560 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS13565 PF00899 ThiF family CDIF29020_RS13570 PF06725 3D domain CDIF29020_RS13570 PF01476 LysM domain CDIF29020_RS13575 PF03167 Uracil DNA glycosylase superfamily CDIF29020_RS13585 PF02424 ApbE family CDIF29020_RS13595 PF01381 Helix-turn-helix CDIF29020_RS13600 PF00155 Aminotransferase class I and II CDIF29020_RS13605 PF01321 Creatinase/Prolidase N-terminal domain CDIF29020_RS13605 PF00557 Metallopeptidase family M24 CDIF29020_RS13610 PF02378 Phosphotransferase system, EIIC CDIF29020_RS13615 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS13620 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS13620 PF05524 PEP-utilising enzyme, N-terminal CDIF29020_RS13620 PF00391 PEP-utilising enzyme, mobile domain CDIF29020_RS13620 PF00381 PTS HPr component phosphorylation site CDIF29020_RS13620 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29020_RS13625 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS13625 PF00874 PRD domain CDIF29020_RS13625 PF05043 Mga helix-turn-helix domain CDIF29020_RS13625 PF08279 HTH domain CDIF29020_RS13630 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS13635 PF01238 Phosphomannose isomerase type I CDIF29020_RS13640 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS13640 PF00989 PAS fold CDIF29020_RS13640 PF00672 HAMP domain CDIF29020_RS13640 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS13640 PF18698 Histidine kinase sensor domain CDIF29020_RS13645 PF00009 Elongation factor Tu GTP binding domain CDIF29020_RS13645 PF09107 Elongation factor SelB, winged helix CDIF29020_RS13645 PF09106 Elongation factor SelB, winged helix CDIF29020_RS13645 PF03144 Elongation factor Tu domain 2 CDIF29020_RS13645 PF09105 Elongation factor SelB, winged helix CDIF29020_RS13650 PF03841 L-seryl-tRNA selenium transferase CDIF29020_RS13650 PF12390 Selenocysteine synthase N terminal CDIF29020_RS13665 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29020_RS13665 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29020_RS13675 PF00206 Lyase CDIF29020_RS13675 PF14698 Argininosuccinate lyase C-terminal CDIF29020_RS13685 PF00155 Aminotransferase class I and II CDIF29020_RS13690 PF00690 Cation transporter/ATPase, N-terminus CDIF29020_RS13690 PF00689 Cation transporting ATPase, C-terminus CDIF29020_RS13695 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29020_RS13700 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS13705 PF07690 Major Facilitator Superfamily CDIF29020_RS13720 PF02056 Family 4 glycosyl hydrolase CDIF29020_RS13720 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29020_RS13725 PF02378 Phosphotransferase system, EIIC CDIF29020_RS13725 PF00367 phosphotransferase system, EIIB CDIF29020_RS13730 PF00874 PRD domain CDIF29020_RS13730 PF03123 CAT RNA binding domain CDIF29020_RS13735 PF02378 Phosphotransferase system, EIIC CDIF29020_RS13735 PF00367 phosphotransferase system, EIIB CDIF29020_RS13735 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS13740 PF01042 Endoribonuclease L-PSP CDIF29020_RS13745 PF13291 ACT domain CDIF29020_RS13745 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS13750 PF00155 Aminotransferase class I and II CDIF29020_RS13755 PF17763 Glutaminase/Asparaginase C-terminal domain CDIF29020_RS13755 PF00710 Asparaginase, N-terminal CDIF29020_RS13790 PF08264 Anticodon-binding domain of tRNA CDIF29020_RS13790 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29020_RS13790 PF13603 Leucyl-tRNA synthetase, Domain 2 CDIF29020_RS13790 PF09334 tRNA synthetases class I (M) CDIF29020_RS13800 PF01966 HD domain CDIF29020_RS13805 PF01467 Cytidylyltransferase-like CDIF29020_RS13810 PF02631 RecX family CDIF29020_RS13815 PF02806 Alpha amylase, C-terminal all-beta domain CDIF29020_RS13815 PF00128 Alpha amylase, catalytic domain CDIF29020_RS13815 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDIF29020_RS13820 PF17932 Tetracyclin repressor-like, C-terminal domain CDIF29020_RS13820 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS13850 PF01385 Probable transposase CDIF29020_RS13850 PF07282 Putative transposase DNA-binding domain CDIF29020_RS13850 PF12323 Helix-turn-helix domain CDIF29020_RS13870 PF00005 ABC transporter CDIF29020_RS13870 PF02687 FtsX-like permease family CDIF29020_RS13870 PF12704 MacB-like periplasmic core domain CDIF29020_RS13875 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS13875 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS13875 PF00672 HAMP domain CDIF29020_RS13875 PF18698 Histidine kinase sensor domain CDIF29020_RS13880 PF00072 Response regulator receiver domain CDIF29020_RS13880 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS13885 PF00149 Calcineurin-like phosphoesterase CDIF29020_RS13885 PF02872 5'-nucleotidase, C-terminal domain CDIF29020_RS13895 PF12706 Beta-lactamase superfamily domain CDIF29020_RS13900 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS13900 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29020_RS13905 PF00375 Sodium:dicarboxylate symporter family CDIF29020_RS13915 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29020_RS13930 PF00404 Dockerin type I domain CDIF29020_RS13930 PF00150 Cellulase (glycosyl hydrolase family 5) CDIF29020_RS13930 PF02156 Glycosyl hydrolase family 26 CDIF29020_RS13930 PF03425 Carbohydrate binding domain (family 11) CDIF29020_RS13940 PF12323 Helix-turn-helix domain CDIF29020_RS13940 PF01385 Probable transposase CDIF29020_RS13940 PF07282 Putative transposase DNA-binding domain CDIF29020_RS13950 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS13955 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS13970 PF01467 Cytidylyltransferase-like CDIF29020_RS13980 PF17191 RecG wedge domain CDIF29020_RS13980 PF00271 Helicase conserved C-terminal domain CDIF29020_RS13980 PF00270 DEAD/DEAH box helicase CDIF29020_RS13985 PF02734 DAK2 domain CDIF29020_RS13985 PF13684 Dihydroxyacetone kinase family CDIF29020_RS13990 PF03780 Asp23 family, cell envelope-related function CDIF29020_RS13995 PF00830 Ribosomal L28 family CDIF29020_RS14010 PF07739 TipAS antibiotic-recognition domain CDIF29020_RS14010 PF13411 MerR HTH family regulatory protein CDIF29020_RS14015 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS14015 PF00874 PRD domain CDIF29020_RS14015 PF05043 Mga helix-turn-helix domain CDIF29020_RS14015 PF08279 HTH domain CDIF29020_RS14020 PF02378 Phosphotransferase system, EIIC CDIF29020_RS14020 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS14020 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS14025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS14025 PF02378 Phosphotransferase system, EIIC CDIF29020_RS14025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS14035 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29020_RS14035 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29020_RS14035 PF09261 Alpha mannosidase middle domain CDIF29020_RS14040 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS14040 PF00989 PAS fold CDIF29020_RS14040 PF16736 Single Cache-like CDIF29020_RS14040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS14045 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS14045 PF00072 Response regulator receiver domain CDIF29020_RS14060 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CDIF29020_RS14060 PF04263 Thiamin pyrophosphokinase, catalytic domain CDIF29020_RS14065 PF00834 Ribulose-phosphate 3 epimerase family CDIF29020_RS14070 PF03193 RsgA GTPase CDIF29020_RS14070 PF16745 RsgA N-terminal domain CDIF29020_RS14080 PF00069 Protein kinase domain CDIF29020_RS14080 PF03793 PASTA domain CDIF29020_RS14090 PF04055 Radical SAM superfamily CDIF29020_RS14095 PF01029 NusB family CDIF29020_RS14095 PF01189 16S rRNA methyltransferase RsmB/F CDIF29020_RS14100 PF04298 Putative neutral zinc metallopeptidase CDIF29020_RS14110 PF00551 Formyl transferase CDIF29020_RS14110 PF02911 Formyl transferase, C-terminal domain CDIF29020_RS14115 PF01327 Polypeptide deformylase CDIF29020_RS14120 PF04851 Type III restriction enzyme, res subunit CDIF29020_RS14120 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDIF29020_RS14120 PF18074 Primosomal protein N C-terminal domain CDIF29020_RS14120 PF00271 Helicase conserved C-terminal domain CDIF29020_RS14120 PF17764 3′ DNA-binding domain (3′BD) CDIF29020_RS14125 PF02441 Flavoprotein CDIF29020_RS14125 PF04127 DNA / pantothenate metabolism flavoprotein CDIF29020_RS14130 PF01192 RNA polymerase Rpb6 CDIF29020_RS14135 PF00625 Guanylate kinase CDIF29020_RS14140 PF08340 Domain of unknown function (DUF1732) CDIF29020_RS14140 PF03755 YicC-like family, N-terminal region CDIF29020_RS14145 PF01678 Diaminopimelate epimerase CDIF29020_RS14150 PF01212 Beta-eliminating lyase CDIF29020_RS14155 PF05670 NFACT protein RNA binding domain CDIF29020_RS14160 PF16326 ABC transporter C-terminal domain CDIF29020_RS14160 PF00005 ABC transporter CDIF29020_RS14160 PF12848 ABC transporter CDIF29020_RS14165 PF00860 Permease family CDIF29020_RS14170 PF00156 Phosphoribosyl transferase domain CDIF29020_RS14175 PF00849 RNA pseudouridylate synthase CDIF29020_RS14175 PF01479 S4 domain CDIF29020_RS14180 PF01252 Signal peptidase (SPase) II CDIF29020_RS14185 PF01522 Polysaccharide deacetylase CDIF29020_RS14190 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDIF29020_RS14195 PF02554 Carbon starvation protein CstA CDIF29020_RS14200 PF04397 LytTr DNA-binding domain CDIF29020_RS14200 PF00072 Response regulator receiver domain CDIF29020_RS14205 PF07694 5TMR of 5TMR-LYT CDIF29020_RS14205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS14205 PF06580 Histidine kinase CDIF29020_RS14220 PF17476 Clostridial binary toxin B/anthrax toxin PA domain 3 CDIF29020_RS14220 PF03495 Clostridial binary toxin B/anthrax toxin PA Ca-binding domain CDIF29020_RS14220 PF17475 Clostridial binary toxin B/anthrax toxin PA domain 2 CDIF29020_RS14220 PF07691 PA14 domain CDIF29020_RS14225 PF00579 tRNA synthetases class I (W and Y) CDIF29020_RS14230 PF01048 Phosphorylase superfamily CDIF29020_RS14235 PF13520 Amino acid permease CDIF29020_RS14240 PF00557 Metallopeptidase family M24 CDIF29020_RS14240 PF01321 Creatinase/Prolidase N-terminal domain CDIF29020_RS14245 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29020_RS14250 PF08360 QacR-like protein, C-terminal region CDIF29020_RS14250 PF00440 Bacterial regulatory proteins, tetR family CDIF29020_RS14260 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29020_RS14260 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29020_RS14265 PF08264 Anticodon-binding domain of tRNA CDIF29020_RS14265 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29020_RS14270 PF05103 DivIVA protein CDIF29020_RS14275 PF17774 Putative RNA-binding domain in YlmH CDIF29020_RS14275 PF01479 S4 domain CDIF29020_RS14285 PF04472 Cell division protein SepF CDIF29020_RS14290 PF01168 Alanine racemase, N-terminal domain CDIF29020_RS14305 PF05167 Uncharacterised ACR (DUF711) CDIF29020_RS14320 PF09547 Stage IV sporulation protein A (spore_IV_A) CDIF29020_RS14335 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDIF29020_RS14335 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDIF29020_RS14340 PF02660 Glycerol-3-phosphate acyltransferase CDIF29020_RS14345 PF01926 50S ribosome-binding GTPase CDIF29020_RS14345 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDIF29020_RS14360 PF14045 YIEGIA protein CDIF29020_RS14365 PF14045 YIEGIA protein CDIF29020_RS14370 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS14370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS14370 PF16736 Single Cache-like CDIF29020_RS14370 PF00989 PAS fold CDIF29020_RS14375 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS14375 PF00072 Response regulator receiver domain CDIF29020_RS14380 PF02578 Multi-copper polyphenol oxidoreductase laccase CDIF29020_RS14385 PF03477 ATP cone domain CDIF29020_RS14390 PF05239 PRC-barrel domain CDIF29020_RS14395 PF04542 Sigma-70 region 2 CDIF29020_RS14395 PF04539 Sigma-70 region 3 CDIF29020_RS14395 PF04545 Sigma-70, region 4 CDIF29020_RS14400 PF04542 Sigma-70 region 2 CDIF29020_RS14400 PF04545 Sigma-70, region 4 CDIF29020_RS14405 PF03419 Sporulation factor SpoIIGA CDIF29020_RS14415 PF12327 FtsZ family, C-terminal domain CDIF29020_RS14415 PF00091 Tubulin/FtsZ family, GTPase domain CDIF29020_RS14420 PF06947 Protein of unknown function (DUF1290) CDIF29020_RS14435 PF08478 POTRA domain, FtsQ-type CDIF29020_RS14435 PF03799 Cell division protein FtsQ CDIF29020_RS14440 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29020_RS14440 PF03033 Glycosyltransferase family 28 N-terminal domain CDIF29020_RS14445 PF01098 Cell cycle protein CDIF29020_RS14450 PF08245 Mur ligase middle domain CDIF29020_RS14450 PF02875 Mur ligase family, glutamate ligase domain CDIF29020_RS14455 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDIF29020_RS14455 PF00953 Glycosyl transferase family 4 CDIF29020_RS14460 PF02875 Mur ligase family, glutamate ligase domain CDIF29020_RS14460 PF01225 Mur ligase family, catalytic domain CDIF29020_RS14460 PF08245 Mur ligase middle domain CDIF29020_RS14465 PF03793 PASTA domain CDIF29020_RS14465 PF00905 Penicillin binding protein transpeptidase domain CDIF29020_RS14465 PF03717 Penicillin-binding Protein dimerisation domain CDIF29020_RS14475 PF01795 MraW methylase family CDIF29020_RS14480 PF01790 Prolipoprotein diacylglyceryl transferase CDIF29020_RS14485 PF00675 Insulinase (Peptidase family M16) CDIF29020_RS14485 PF05193 Peptidase M16 inactive domain CDIF29020_RS14495 PF01926 50S ribosome-binding GTPase CDIF29020_RS14495 PF06071 Protein of unknown function (DUF933) CDIF29020_RS14500 PF00563 EAL domain CDIF29020_RS14500 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS14500 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS14505 PF01225 Mur ligase family, catalytic domain CDIF29020_RS14505 PF02875 Mur ligase family, glutamate ligase domain CDIF29020_RS14505 PF08245 Mur ligase middle domain CDIF29020_RS14510 PF12833 Helix-turn-helix domain CDIF29020_RS14515 PF02378 Phosphotransferase system, EIIC CDIF29020_RS14515 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS14515 PF00367 phosphotransferase system, EIIB CDIF29020_RS14520 PF03123 CAT RNA binding domain CDIF29020_RS14520 PF00874 PRD domain CDIF29020_RS14525 PF00999 Sodium/hydrogen exchanger family CDIF29020_RS14530 PF00005 ABC transporter CDIF29020_RS14530 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29020_RS14535 PF00005 ABC transporter CDIF29020_RS14535 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29020_RS14540 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29020_RS14545 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS14550 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS14550 PF12911 N-terminal TM domain of oligopeptide transport permease C CDIF29020_RS14555 PF03466 LysR substrate binding domain CDIF29020_RS14555 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS14560 PF02803 Thiolase, C-terminal domain CDIF29020_RS14560 PF00108 Thiolase, N-terminal domain CDIF29020_RS14565 PF01144 Coenzyme A transferase CDIF29020_RS14570 PF01144 Coenzyme A transferase CDIF29020_RS14585 PF00188 Cysteine-rich secretory protein family CDIF29020_RS14590 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDIF29020_RS14590 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29020_RS14590 PF10371 Domain of unknown function CDIF29020_RS14590 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29020_RS14590 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29020_RS14595 PF06130 Phosphate propanoyltransferase CDIF29020_RS14625 PF00269 Small, acid-soluble spore proteins, alpha/beta type CDIF29020_RS14635 PF01569 PAP2 superfamily CDIF29020_RS14640 PF00156 Phosphoribosyl transferase domain CDIF29020_RS14645 PF00155 Aminotransferase class I and II CDIF29020_RS14680 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS14680 PF05257 CHAP domain CDIF29020_RS14680 PF08460 Bacterial SH3 domain CDIF29020_RS14700 PF03590 Aspartate-ammonia ligase CDIF29020_RS14705 PF00155 Aminotransferase class I and II CDIF29020_RS14730 PF02920 DNA binding domain of tn916 integrase CDIF29020_RS14730 PF00589 Phage integrase family CDIF29020_RS14735 PF09035 Excisionase from transposon Tn916 CDIF29020_RS14820 PF18106 Rolling Circle replication initiation protein N-terminal domain CDIF29020_RS14820 PF02486 Replication initiation factor CDIF29020_RS14840 PF06125 Bacterial protein of unknown function (DUF961) CDIF29020_RS14855 PF05525 Branched-chain amino acid transport protein CDIF29020_RS14865 PF00860 Permease family CDIF29020_RS14870 PF01979 Amidohydrolase family CDIF29020_RS14880 PF07690 Major Facilitator Superfamily CDIF29020_RS14885 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDIF29020_RS14885 PF08501 Shikimate dehydrogenase substrate binding domain CDIF29020_RS14890 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29020_RS14890 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS14900 PF03466 LysR substrate binding domain CDIF29020_RS14900 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS14910 PF01476 LysM domain CDIF29020_RS14910 PF03734 L,D-transpeptidase catalytic domain CDIF29020_RS14915 PF16363 GDP-mannose 4,6 dehydratase CDIF29020_RS14920 PF00483 Nucleotidyl transferase CDIF29020_RS14945 PF04203 Sortase domain CDIF29020_RS14965 PF01522 Polysaccharide deacetylase CDIF29020_RS14975 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS14980 PF00072 Response regulator receiver domain CDIF29020_RS14980 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS14990 PF01522 Polysaccharide deacetylase CDIF29020_RS14995 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29020_RS14995 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29020_RS15000 PF00464 Serine hydroxymethyltransferase CDIF29020_RS15020 PF02583 Metal-sensitive transcriptional repressor CDIF29020_RS15045 PF07282 Putative transposase DNA-binding domain CDIF29020_RS15045 PF01385 Probable transposase CDIF29020_RS15045 PF12323 Helix-turn-helix domain CDIF29020_RS15055 PF00155 Aminotransferase class I and II CDIF29020_RS15060 PF03553 Na+/H+ antiporter family CDIF29020_RS15070 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15070 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS15075 PF03466 LysR substrate binding domain CDIF29020_RS15075 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS15080 PF00795 Carbon-nitrogen hydrolase CDIF29020_RS15090 PF02938 GAD domain CDIF29020_RS15090 PF01336 OB-fold nucleic acid binding domain CDIF29020_RS15090 PF00152 tRNA synthetases class II (D, K and N) CDIF29020_RS15095 PF03129 Anticodon binding domain CDIF29020_RS15095 PF13393 Histidyl-tRNA synthetase CDIF29020_RS15100 PF04055 Radical SAM superfamily CDIF29020_RS15105 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS15110 PF02580 D-Tyr-tRNA(Tyr) deacylase CDIF29020_RS15115 PF02824 TGS domain CDIF29020_RS15115 PF04607 Region found in RelA / SpoT proteins CDIF29020_RS15115 PF13291 ACT domain CDIF29020_RS15120 PF00156 Phosphoribosyl transferase domain CDIF29020_RS15125 PF17768 RecJ OB domain CDIF29020_RS15125 PF02272 DHHA1 domain CDIF29020_RS15125 PF01368 DHH family CDIF29020_RS15125 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDIF29020_RS15130 PF03109 ABC1 family CDIF29020_RS15135 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29020_RS15165 PF05524 PEP-utilising enzyme, N-terminal CDIF29020_RS15165 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29020_RS15165 PF00391 PEP-utilising enzyme, mobile domain CDIF29020_RS15170 PF00381 PTS HPr component phosphorylation site CDIF29020_RS15180 PF12950 TaqI-like C-terminal specificity domain CDIF29020_RS15180 PF07669 Eco57I restriction-modification methylase CDIF29020_RS15190 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS15190 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS15190 PF00563 EAL domain CDIF29020_RS15195 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15195 PF08239 Bacterial SH3 domain CDIF29020_RS15200 PF01255 Putative undecaprenyl diphosphate synthase CDIF29020_RS15215 PF03816 Cell envelope-related transcriptional attenuator domain CDIF29020_RS15220 PF03816 Cell envelope-related transcriptional attenuator domain CDIF29020_RS15225 PF02638 Glycosyl hydrolase-like 10 CDIF29020_RS15230 PF00877 NlpC/P60 family CDIF29020_RS15235 PF02719 Polysaccharide biosynthesis protein CDIF29020_RS15240 PF13439 Glycosyltransferase Family 4 CDIF29020_RS15240 PF00534 Glycosyl transferases group 1 CDIF29020_RS15245 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDIF29020_RS15245 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDIF29020_RS15245 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDIF29020_RS15250 PF00535 Glycosyl transferase family 2 CDIF29020_RS15255 PF00535 Glycosyl transferase family 2 CDIF29020_RS15260 PF00535 Glycosyl transferase family 2 CDIF29020_RS15265 PF00535 Glycosyl transferase family 2 CDIF29020_RS15265 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CDIF29020_RS15270 PF00535 Glycosyl transferase family 2 CDIF29020_RS15285 PF01050 Mannose-6-phosphate isomerase CDIF29020_RS15285 PF00483 Nucleotidyl transferase CDIF29020_RS15290 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29020_RS15290 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29020_RS15290 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29020_RS15290 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29020_RS15295 PF03023 Lipid II flippase MurJ CDIF29020_RS15300 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS15300 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15305 PF02397 Bacterial sugar transferase CDIF29020_RS15310 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15310 PF08239 Bacterial SH3 domain CDIF29020_RS15325 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS15325 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15335 PF04138 GtrA-like protein CDIF29020_RS15340 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15340 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS15355 PF07517 SecA DEAD-like domain CDIF29020_RS15355 PF01043 SecA preprotein cross-linking domain CDIF29020_RS15355 PF07516 SecA Wing and Scaffold domain CDIF29020_RS15380 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS15380 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS15395 PF02699 Preprotein translocase subunit CDIF29020_RS15400 PF01702 Queuine tRNA-ribosyltransferase CDIF29020_RS15410 PF02547 Queuosine biosynthesis protein CDIF29020_RS15415 PF17864 RuvB AAA lid domain CDIF29020_RS15415 PF05491 RuvB C-terminal winged helix domain CDIF29020_RS15415 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDIF29020_RS15420 PF07499 RuvA, C-terminal domain CDIF29020_RS15420 PF01330 RuvA N terminal domain CDIF29020_RS15425 PF02075 Crossover junction endodeoxyribonuclease RuvC CDIF29020_RS15450 PF01385 Probable transposase CDIF29020_RS15450 PF12323 Helix-turn-helix domain CDIF29020_RS15450 PF07282 Putative transposase DNA-binding domain CDIF29020_RS15465 PF02447 GntP family permease CDIF29020_RS15470 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDIF29020_RS15470 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDIF29020_RS15475 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS15475 PF07729 FCD domain CDIF29020_RS15490 PF00664 ABC transporter transmembrane region CDIF29020_RS15490 PF00005 ABC transporter CDIF29020_RS15495 PF00664 ABC transporter transmembrane region CDIF29020_RS15495 PF00005 ABC transporter CDIF29020_RS15525 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29020_RS15525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS15535 PF00155 Aminotransferase class I and II CDIF29020_RS15540 PF00892 EamA-like transporter family CDIF29020_RS15545 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CDIF29020_RS15555 PF16916 Dimerisation domain of Zinc Transporter CDIF29020_RS15555 PF01545 Cation efflux family CDIF29020_RS15565 PF00690 Cation transporter/ATPase, N-terminus CDIF29020_RS15565 PF00689 Cation transporting ATPase, C-terminus CDIF29020_RS15570 PF00464 Serine hydroxymethyltransferase CDIF29020_RS15575 PF03806 AbgT putative transporter family CDIF29020_RS15580 PF07687 Peptidase dimerisation domain CDIF29020_RS15580 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS15590 PF00072 Response regulator receiver domain CDIF29020_RS15590 PF08769 Sporulation initiation factor Spo0A C terminal CDIF29020_RS15600 PF02403 Seryl-tRNA synthetase N-terminal domain CDIF29020_RS15600 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29020_RS15605 PF07969 Amidohydrolase family CDIF29020_RS15610 PF00795 Carbon-nitrogen hydrolase CDIF29020_RS15615 PF00107 Zinc-binding dehydrogenase CDIF29020_RS15615 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29020_RS15625 PF02915 Rubrerythrin CDIF29020_RS15630 PF13171 Protein of unknown function (DUF4004) CDIF29020_RS15645 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS15645 PF00266 Aminotransferase class-V CDIF29020_RS15650 PF00455 DeoR C terminal sensor domain CDIF29020_RS15650 PF08220 DeoR-like helix-turn-helix domain CDIF29020_RS15655 PF00550 Phosphopantetheine attachment site CDIF29020_RS15660 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29020_RS15665 PF13193 AMP-binding enzyme C-terminal domain CDIF29020_RS15665 PF00501 AMP-binding enzyme CDIF29020_RS15675 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDIF29020_RS15675 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDIF29020_RS15685 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS15690 PF01595 Cyclin M transmembrane N-terminal domain CDIF29020_RS15690 PF03471 Transporter associated domain CDIF29020_RS15690 PF00571 CBS domain CDIF29020_RS15695 PF07969 Amidohydrolase family CDIF29020_RS15710 PF01244 Membrane dipeptidase (Peptidase family M19) CDIF29020_RS15715 PF00158 Sigma-54 interaction domain CDIF29020_RS15715 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS15715 PF00989 PAS fold CDIF29020_RS15720 PF08386 TAP-like protein CDIF29020_RS15720 PF00561 alpha/beta hydrolase fold CDIF29020_RS15730 PF01523 Putative modulator of DNA gyrase CDIF29020_RS15735 PF01523 Putative modulator of DNA gyrase CDIF29020_RS15745 PF00158 Sigma-54 interaction domain CDIF29020_RS15745 PF13426 PAS domain CDIF29020_RS15745 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS15750 PF03812 2-keto-3-deoxygluconate permease CDIF29020_RS15760 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDIF29020_RS15765 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS15765 PF00563 EAL domain CDIF29020_RS15765 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS15770 PF01554 MatE CDIF29020_RS15775 PF00005 ABC transporter CDIF29020_RS15780 PF01032 FecCD transport family CDIF29020_RS15785 PF01032 FecCD transport family CDIF29020_RS15800 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29020_RS15805 PF04794 YdjC-like protein CDIF29020_RS15810 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29020_RS15810 PF02056 Family 4 glycosyl hydrolase CDIF29020_RS15815 PF02378 Phosphotransferase system, EIIC CDIF29020_RS15820 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS15825 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS15825 PF07702 UTRA domain CDIF29020_RS15830 PF16657 Maltogenic Amylase, C-terminal domain CDIF29020_RS15830 PF00128 Alpha amylase, catalytic domain CDIF29020_RS15835 PF02378 Phosphotransferase system, EIIC CDIF29020_RS15835 PF00367 phosphotransferase system, EIIB CDIF29020_RS15845 PF07702 UTRA domain CDIF29020_RS15845 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS15850 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS15855 PF08402 TOBE domain CDIF29020_RS15855 PF00005 ABC transporter CDIF29020_RS15865 PF01813 ATP synthase subunit D CDIF29020_RS15870 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29020_RS15870 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29020_RS15875 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29020_RS15875 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29020_RS15875 PF16886 ATPsynthase alpha/beta subunit N-term extension CDIF29020_RS15880 PF01990 ATP synthase (F/14-kDa) subunit CDIF29020_RS15890 PF01991 ATP synthase (E/31 kDa) subunit CDIF29020_RS15895 PF00137 ATP synthase subunit C CDIF29020_RS15900 PF01496 V-type ATPase 116kDa subunit family CDIF29020_RS15925 PF03707 Bacterial signalling protein N terminal repeat CDIF29020_RS15925 PF00563 EAL domain CDIF29020_RS15925 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS15930 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS15930 PF00171 Aldehyde dehydrogenase family CDIF29020_RS15940 PF02441 Flavoprotein CDIF29020_RS15950 PF13193 AMP-binding enzyme C-terminal domain CDIF29020_RS15950 PF00501 AMP-binding enzyme CDIF29020_RS15955 PF02803 Thiolase, C-terminal domain CDIF29020_RS15955 PF00108 Thiolase, N-terminal domain CDIF29020_RS15960 PF02632 BioY family CDIF29020_RS15975 PF09827 CRISPR associated protein Cas2 CDIF29020_RS15980 PF01867 CRISPR associated protein Cas1 CDIF29020_RS15990 PF18019 HD domain CDIF29020_RS15990 PF00271 Helicase conserved C-terminal domain CDIF29020_RS15990 PF00270 DEAD/DEAH box helicase CDIF29020_RS16020 PF02687 FtsX-like permease family CDIF29020_RS16025 PF00005 ABC transporter CDIF29020_RS16030 PF02673 Bacitracin resistance protein BacA CDIF29020_RS16035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS16040 PF00072 Response regulator receiver domain CDIF29020_RS16040 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS16050 PF00005 ABC transporter CDIF29020_RS16055 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS16065 PF07282 Putative transposase DNA-binding domain CDIF29020_RS16065 PF01385 Probable transposase CDIF29020_RS16065 PF12323 Helix-turn-helix domain CDIF29020_RS16080 PF00268 Ribonucleotide reductase, small chain CDIF29020_RS16085 PF02867 Ribonucleotide reductase, barrel domain CDIF29020_RS16085 PF08343 Ribonucleotide reductase N-terminal CDIF29020_RS16085 PF00317 Ribonucleotide reductase, all-alpha domain CDIF29020_RS16095 PF00005 ABC transporter CDIF29020_RS16100 PF01032 FecCD transport family CDIF29020_RS16110 PF00701 Dihydrodipicolinate synthetase family CDIF29020_RS16115 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDIF29020_RS16120 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDIF29020_RS16130 PF03812 2-keto-3-deoxygluconate permease CDIF29020_RS16140 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS16145 PF03734 L,D-transpeptidase catalytic domain CDIF29020_RS16155 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29020_RS16155 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS16160 PF02683 Cytochrome C biogenesis protein transmembrane region CDIF29020_RS16165 PF01638 HxlR-like helix-turn-helix CDIF29020_RS16170 PF09261 Alpha mannosidase middle domain CDIF29020_RS16170 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29020_RS16170 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29020_RS16180 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS16185 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16185 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS16190 PF08279 HTH domain CDIF29020_RS16190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16190 PF00874 PRD domain CDIF29020_RS16190 PF05043 Mga helix-turn-helix domain CDIF29020_RS16195 PF06800 Sugar transport protein CDIF29020_RS16215 PF08331 Domain of unknown function (DUF1730) CDIF29020_RS16230 PF00005 ABC transporter CDIF29020_RS16240 PF00989 PAS fold CDIF29020_RS16240 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS16240 PF13426 PAS domain CDIF29020_RS16240 PF13188 PAS domain CDIF29020_RS16240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS16245 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS16245 PF00072 Response regulator receiver domain CDIF29020_RS16250 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS16255 PF00085 Thioredoxin CDIF29020_RS16265 PF02567 Phenazine biosynthesis-like protein CDIF29020_RS16270 PF00854 POT family CDIF29020_RS16285 PF07724 AAA domain (Cdc48 subfamily) CDIF29020_RS16285 PF17871 AAA lid domain CDIF29020_RS16285 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29020_RS16285 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS16285 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29020_RS16305 PF00561 alpha/beta hydrolase fold CDIF29020_RS16320 PF01418 Helix-turn-helix domain, rpiR family CDIF29020_RS16320 PF01380 SIS domain CDIF29020_RS16325 PF07282 Putative transposase DNA-binding domain CDIF29020_RS16325 PF01385 Probable transposase CDIF29020_RS16325 PF12323 Helix-turn-helix domain CDIF29020_RS16340 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29020_RS16345 PF13580 SIS domain CDIF29020_RS16355 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16370 PF03702 Anhydro-N-acetylmuramic acid kinase CDIF29020_RS16380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS16385 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS16385 PF00072 Response regulator receiver domain CDIF29020_RS16395 PF00005 ABC transporter CDIF29020_RS16405 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16415 PF02056 Family 4 glycosyl hydrolase CDIF29020_RS16415 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29020_RS16420 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16420 PF00367 phosphotransferase system, EIIB CDIF29020_RS16435 PF01261 Xylose isomerase-like TIM barrel CDIF29020_RS16440 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29020_RS16440 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29020_RS16445 PF00480 ROK family CDIF29020_RS16455 PF03830 PTS system sorbose subfamily IIB component CDIF29020_RS16455 PF03610 PTS system fructose IIA component CDIF29020_RS16460 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29020_RS16465 PF03609 PTS system sorbose-specific iic component CDIF29020_RS16470 PF01055 Glycosyl hydrolases family 31 CDIF29020_RS16485 PF00128 Alpha amylase, catalytic domain CDIF29020_RS16485 PF16657 Maltogenic Amylase, C-terminal domain CDIF29020_RS16490 PF01116 Fructose-bisphosphate aldolase class-II CDIF29020_RS16495 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS16495 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16495 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16500 PF00294 pfkB family carbohydrate kinase CDIF29020_RS16520 PF04794 YdjC-like protein CDIF29020_RS16525 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16525 PF00367 phosphotransferase system, EIIB CDIF29020_RS16525 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16530 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS16530 PF07702 UTRA domain CDIF29020_RS16535 PF00128 Alpha amylase, catalytic domain CDIF29020_RS16535 PF16657 Maltogenic Amylase, C-terminal domain CDIF29020_RS16540 PF13520 Amino acid permease CDIF29020_RS16545 PF07722 Peptidase C26 CDIF29020_RS16550 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS16550 PF00158 Sigma-54 interaction domain CDIF29020_RS16550 PF13426 PAS domain CDIF29020_RS16555 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS16560 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS16565 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16565 PF00367 phosphotransferase system, EIIB CDIF29020_RS16565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16570 PF03123 CAT RNA binding domain CDIF29020_RS16570 PF00874 PRD domain CDIF29020_RS16575 PF07687 Peptidase dimerisation domain CDIF29020_RS16575 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS16580 PF03606 C4-dicarboxylate anaerobic carrier CDIF29020_RS16585 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16585 PF00367 phosphotransferase system, EIIB CDIF29020_RS16585 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16590 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS16600 PF00664 ABC transporter transmembrane region CDIF29020_RS16600 PF00005 ABC transporter CDIF29020_RS16605 PF00005 ABC transporter CDIF29020_RS16620 PF06463 Molybdenum Cofactor Synthesis C CDIF29020_RS16620 PF04055 Radical SAM superfamily CDIF29020_RS16630 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS16630 PF00072 Response regulator receiver domain CDIF29020_RS16635 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16645 PF00465 Iron-containing alcohol dehydrogenase CDIF29020_RS16650 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29020_RS16655 PF05043 Mga helix-turn-helix domain CDIF29020_RS16655 PF08279 HTH domain CDIF29020_RS16655 PF00874 PRD domain CDIF29020_RS16655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16660 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29020_RS16660 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29020_RS16665 PF00834 Ribulose-phosphate 3 epimerase family CDIF29020_RS16670 PF00365 Phosphofructokinase CDIF29020_RS16695 PF02082 Transcriptional regulator CDIF29020_RS16700 PF00881 Nitroreductase family CDIF29020_RS16705 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS16710 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16710 PF00367 phosphotransferase system, EIIB CDIF29020_RS16710 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16720 PF00005 ABC transporter CDIF29020_RS16735 PF00072 Response regulator receiver domain CDIF29020_RS16735 PF04397 LytTr DNA-binding domain CDIF29020_RS16745 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CDIF29020_RS16750 PF01381 Helix-turn-helix CDIF29020_RS16755 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29020_RS16755 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS16760 PF07690 Major Facilitator Superfamily CDIF29020_RS16765 PF10400 Virulence activator alpha C-term CDIF29020_RS16765 PF03551 Transcriptional regulator PadR-like family CDIF29020_RS16775 PF01022 Bacterial regulatory protein, arsR family CDIF29020_RS16780 PF00881 Nitroreductase family CDIF29020_RS16785 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS16790 PF00367 phosphotransferase system, EIIB CDIF29020_RS16790 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16790 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16795 PF03123 CAT RNA binding domain CDIF29020_RS16795 PF00874 PRD domain CDIF29020_RS16805 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16805 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16805 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS16810 PF08279 HTH domain CDIF29020_RS16810 PF05043 Mga helix-turn-helix domain CDIF29020_RS16810 PF00874 PRD domain CDIF29020_RS16810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16810 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS16815 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS16815 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29020_RS16820 PF01116 Fructose-bisphosphate aldolase class-II CDIF29020_RS16825 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS16830 PF08402 TOBE domain CDIF29020_RS16830 PF00005 ABC transporter CDIF29020_RS16845 PF00232 Glycosyl hydrolase family 1 CDIF29020_RS16850 PF02378 Phosphotransferase system, EIIC CDIF29020_RS16850 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29020_RS16850 PF00367 phosphotransferase system, EIIB CDIF29020_RS16855 PF00874 PRD domain CDIF29020_RS16855 PF03123 CAT RNA binding domain CDIF29020_RS16880 PF01965 DJ-1/PfpI family CDIF29020_RS16935 PF01668 SmpB protein CDIF29020_RS16965 PF17876 Cold shock domain CDIF29020_RS16965 PF08206 Ribonuclease B OB domain CDIF29020_RS16965 PF00773 RNB domain CDIF29020_RS16965 PF00575 S1 RNA binding domain CDIF29020_RS16980 PF01161 Phosphatidylethanolamine-binding protein CDIF29020_RS17010 PF00113 Enolase, C-terminal TIM barrel domain CDIF29020_RS17010 PF03952 Enolase, N-terminal domain CDIF29020_RS17015 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDIF29020_RS17015 PF01676 Metalloenzyme superfamily CDIF29020_RS17020 PF00121 Triosephosphate isomerase CDIF29020_RS17025 PF00162 Phosphoglycerate kinase CDIF29020_RS17030 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDIF29020_RS17030 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDIF29020_RS17035 PF04198 Putative sugar-binding domain CDIF29020_RS17040 PF04963 Sigma-54 factor, core binding domain CDIF29020_RS17040 PF04552 Sigma-54, DNA binding domain CDIF29020_RS17040 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDIF29020_RS17045 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29020_RS17045 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29020_RS17050 PF01979 Amidohydrolase family CDIF29020_RS17055 PF01180 Dihydroorotate dehydrogenase CDIF29020_RS17060 PF00860 Permease family CDIF29020_RS17065 PF01979 Amidohydrolase family CDIF29020_RS17070 PF07969 Amidohydrolase family CDIF29020_RS17075 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS17075 PF07687 Peptidase dimerisation domain CDIF29020_RS17080 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29020_RS17085 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS17085 PF00158 Sigma-54 interaction domain CDIF29020_RS17085 PF13188 PAS domain CDIF29020_RS17090 PF01042 Endoribonuclease L-PSP CDIF29020_RS17105 PF02525 Flavodoxin-like fold CDIF29020_RS17110 PF13411 MerR HTH family regulatory protein CDIF29020_RS17120 PF07282 Putative transposase DNA-binding domain CDIF29020_RS17120 PF01385 Probable transposase CDIF29020_RS17120 PF12323 Helix-turn-helix domain CDIF29020_RS17135 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29020_RS17135 PF04122 Putative cell wall binding repeat 2 CDIF29020_RS17140 PF00005 ABC transporter CDIF29020_RS17145 PF02687 FtsX-like permease family CDIF29020_RS17155 PF00196 Bacterial regulatory proteins, luxR family CDIF29020_RS17155 PF00072 Response regulator receiver domain CDIF29020_RS17170 PF17755 UvrA DNA-binding domain CDIF29020_RS17170 PF00005 ABC transporter CDIF29020_RS17170 PF17760 UvrA interaction domain CDIF29020_RS17180 PF13411 MerR HTH family regulatory protein CDIF29020_RS17185 PF07690 Major Facilitator Superfamily CDIF29020_RS17200 PF00005 ABC transporter CDIF29020_RS17205 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS17205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS17205 PF00672 HAMP domain CDIF29020_RS17210 PF00072 Response regulator receiver domain CDIF29020_RS17210 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS17215 PF02096 60Kd inner membrane protein CDIF29020_RS17225 PF00881 Nitroreductase family CDIF29020_RS17235 PF01554 MatE CDIF29020_RS17265 PF00571 CBS domain CDIF29020_RS17265 PF00005 ABC transporter CDIF29020_RS17270 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CDIF29020_RS17275 PF00005 ABC transporter CDIF29020_RS17275 PF17760 UvrA interaction domain CDIF29020_RS17275 PF17755 UvrA DNA-binding domain CDIF29020_RS17285 PF01430 Hsp33 protein CDIF29020_RS17290 PF13649 Methyltransferase domain CDIF29020_RS17300 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS17300 PF07687 Peptidase dimerisation domain CDIF29020_RS17305 PF03313 Serine dehydratase alpha chain CDIF29020_RS17305 PF03315 Serine dehydratase beta chain CDIF29020_RS17310 PF00701 Dihydrodipicolinate synthetase family CDIF29020_RS17315 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDIF29020_RS17315 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDIF29020_RS17320 PF00701 Dihydrodipicolinate synthetase family CDIF29020_RS17325 PF01113 Dihydrodipicolinate reductase, N-terminus CDIF29020_RS17325 PF05173 Dihydrodipicolinate reductase, C-terminus CDIF29020_RS17330 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29020_RS17330 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29020_RS17330 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CDIF29020_RS17340 PF05173 Dihydrodipicolinate reductase, C-terminus CDIF29020_RS17340 PF01113 Dihydrodipicolinate reductase, N-terminus CDIF29020_RS17350 PF00156 Phosphoribosyl transferase domain CDIF29020_RS17355 PF03313 Serine dehydratase alpha chain CDIF29020_RS17365 PF00158 Sigma-54 interaction domain CDIF29020_RS17365 PF13188 PAS domain CDIF29020_RS17365 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS17370 PF01209 ubiE/COQ5 methyltransferase family CDIF29020_RS17385 PF05544 Proline racemase CDIF29020_RS17395 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29020_RS17400 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29020_RS17415 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29020_RS17425 PF00158 Sigma-54 interaction domain CDIF29020_RS17425 PF13426 PAS domain CDIF29020_RS17425 PF02954 Bacterial regulatory protein, Fis family CDIF29020_RS17435 PF10531 SLBB domain CDIF29020_RS17435 PF13375 RnfC Barrel sandwich hybrid domain CDIF29020_RS17435 PF13237 4Fe-4S dicluster domain CDIF29020_RS17435 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29020_RS17445 PF01522 Polysaccharide deacetylase CDIF29020_RS17450 PF00269 Small, acid-soluble spore proteins, alpha/beta type CDIF29020_RS17470 PF08245 Mur ligase middle domain CDIF29020_RS17480 PF00072 Response regulator receiver domain CDIF29020_RS17480 PF04397 LytTr DNA-binding domain CDIF29020_RS17485 PF10458 Valyl tRNA synthetase tRNA binding arm CDIF29020_RS17485 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29020_RS17485 PF08264 Anticodon-binding domain of tRNA CDIF29020_RS17495 PF01522 Polysaccharide deacetylase CDIF29020_RS17510 PF01895 PhoU domain CDIF29020_RS17515 PF00005 ABC transporter CDIF29020_RS17520 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS17525 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS17535 PF00072 Response regulator receiver domain CDIF29020_RS17535 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS17540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS17540 PF18698 Histidine kinase sensor domain CDIF29020_RS17540 PF00672 HAMP domain CDIF29020_RS17540 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS17545 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS17545 PF00072 Response regulator receiver domain CDIF29020_RS17550 PF12849 PBP superfamily domain CDIF29020_RS17555 PF01432 Peptidase family M3 CDIF29020_RS17555 PF08439 Oligopeptidase F CDIF29020_RS17560 PF02308 MgtC family CDIF29020_RS17580 PF17910 FeoB cytosolic helical domain CDIF29020_RS17580 PF07670 Nucleoside recognition CDIF29020_RS17580 PF07664 Ferrous iron transport protein B C terminus CDIF29020_RS17580 PF02421 Ferrous iron transport protein B CDIF29020_RS17585 PF13580 SIS domain CDIF29020_RS17590 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29020_RS17595 PF03609 PTS system sorbose-specific iic component CDIF29020_RS17600 PF03610 PTS system fructose IIA component CDIF29020_RS17600 PF03830 PTS system sorbose subfamily IIB component CDIF29020_RS17605 PF03830 PTS system sorbose subfamily IIB component CDIF29020_RS17605 PF03610 PTS system fructose IIA component CDIF29020_RS17610 PF00158 Sigma-54 interaction domain CDIF29020_RS17610 PF00874 PRD domain CDIF29020_RS17615 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDIF29020_RS17615 PF03807 NADP oxidoreductase coenzyme F420-dependent CDIF29020_RS17620 PF02901 Pyruvate formate lyase-like CDIF29020_RS17620 PF01228 Glycine radical CDIF29020_RS17625 PF04055 Radical SAM superfamily CDIF29020_RS17630 PF13180 PDZ domain CDIF29020_RS17635 PF00342 Phosphoglucose isomerase CDIF29020_RS17640 PF02690 Na+/Pi-cotransporter CDIF29020_RS17660 PF02810 SEC-C motif CDIF29020_RS17660 PF05225 helix-turn-helix, Psq domain CDIF29020_RS17680 PF07963 Prokaryotic N-terminal methylation motif CDIF29020_RS17680 PF00114 Pilin (bacterial filament) CDIF29020_RS17685 PF00482 Type II secretion system (T2SS), protein F CDIF29020_RS17690 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDIF29020_RS17690 PF00437 Type II/IV secretion system protein CDIF29020_RS17705 PF07690 Major Facilitator Superfamily CDIF29020_RS17710 PF01926 50S ribosome-binding GTPase CDIF29020_RS17715 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDIF29020_RS17715 PF05362 Lon protease (S16) C-terminal proteolytic domain CDIF29020_RS17715 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS17725 PF02417 Chromate transporter CDIF29020_RS17730 PF06689 ClpX C4-type zinc finger CDIF29020_RS17730 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29020_RS17730 PF07724 AAA domain (Cdc48 subfamily) CDIF29020_RS17735 PF00574 Clp protease CDIF29020_RS17740 PF05698 Bacterial trigger factor protein (TF) C-terminus CDIF29020_RS17740 PF05697 Bacterial trigger factor protein (TF) CDIF29020_RS17740 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDIF29020_RS17750 PF01138 3' exoribonuclease family, domain 1 CDIF29020_RS17750 PF03725 3' exoribonuclease family, domain 2 CDIF29020_RS17755 PF12826 Helix-hairpin-helix motif CDIF29020_RS17755 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDIF29020_RS17755 PF03120 NAD-dependent DNA ligase OB-fold domain CDIF29020_RS17755 PF01653 NAD-dependent DNA ligase adenylation domain CDIF29020_RS17755 PF00533 BRCA1 C Terminus (BRCT) domain CDIF29020_RS17810 PF18106 Rolling Circle replication initiation protein N-terminal domain CDIF29020_RS17810 PF02486 Replication initiation factor CDIF29020_RS17820 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29020_RS17820 PF00589 Phage integrase family CDIF29020_RS17830 PF13247 4Fe-4S dicluster domain CDIF29020_RS17830 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDIF29020_RS17830 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29020_RS17835 PF00037 4Fe-4S binding domain CDIF29020_RS17835 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDIF29020_RS17835 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29020_RS17835 PF02256 Iron hydrogenase small subunit CDIF29020_RS17840 PF12800 4Fe-4S binding domain CDIF29020_RS17840 PF13247 4Fe-4S dicluster domain CDIF29020_RS17850 PF02634 FdhD/NarQ family CDIF29020_RS17865 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS17865 PF00072 Response regulator receiver domain CDIF29020_RS17880 PF01385 Probable transposase CDIF29020_RS17880 PF12323 Helix-turn-helix domain CDIF29020_RS17880 PF07282 Putative transposase DNA-binding domain CDIF29020_RS17910 PF13181 Tetratricopeptide repeat CDIF29020_RS17910 PF00535 Glycosyl transferase family 2 CDIF29020_RS17915 PF00574 Clp protease CDIF29020_RS17920 PF12833 Helix-turn-helix domain CDIF29020_RS17925 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS17925 PF00155 Aminotransferase class I and II CDIF29020_RS17935 PF00881 Nitroreductase family CDIF29020_RS17940 PF01638 HxlR-like helix-turn-helix CDIF29020_RS17955 PF00005 ABC transporter CDIF29020_RS17955 PF12848 ABC transporter CDIF29020_RS17960 PF00072 Response regulator receiver domain CDIF29020_RS17960 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS17980 PF00005 ABC transporter CDIF29020_RS17985 PF17156 Gammaproteobacterial periplasmic sensor domain CDIF29020_RS17985 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS17995 PF03193 RsgA GTPase CDIF29020_RS18020 PF01938 TRAM domain CDIF29020_RS18020 PF05958 tRNA (Uracil-5-)-methyltransferase CDIF29020_RS18025 PF00391 PEP-utilising enzyme, mobile domain CDIF29020_RS18025 PF02887 Pyruvate kinase, alpha/beta domain CDIF29020_RS18025 PF00224 Pyruvate kinase, barrel domain CDIF29020_RS18030 PF00365 Phosphofructokinase CDIF29020_RS18035 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29020_RS18035 PF01336 OB-fold nucleic acid binding domain CDIF29020_RS18035 PF02811 PHP domain CDIF29020_RS18035 PF14579 Helix-hairpin-helix motif CDIF29020_RS18035 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29020_RS18040 PF02650 WhiA C-terminal HTH domain CDIF29020_RS18040 PF14527 WhiA LAGLIDADG-like domain CDIF29020_RS18040 PF10298 WhiA N-terminal LAGLIDADG-like domain CDIF29020_RS18045 PF00293 NUDIX domain CDIF29020_RS18050 PF01933 Uncharacterised protein family UPF0052 CDIF29020_RS18055 PF03668 P-loop ATPase protein family CDIF29020_RS18060 PF02811 PHP domain CDIF29020_RS18065 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDIF29020_RS18065 PF01565 FAD binding domain CDIF29020_RS18070 PF01226 Formate/nitrite transporter CDIF29020_RS18075 PF13396 Phospholipase_D-nuclease N-terminal CDIF29020_RS18075 PF13091 PLD-like domain CDIF29020_RS18085 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29020_RS18085 PF00037 4Fe-4S binding domain CDIF29020_RS18085 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDIF29020_RS18090 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDIF29020_RS18090 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29020_RS18090 PF00037 4Fe-4S binding domain CDIF29020_RS18090 PF02256 Iron hydrogenase small subunit CDIF29020_RS18095 PF05190 MutS family domain IV CDIF29020_RS18095 PF01624 MutS domain I CDIF29020_RS18095 PF05192 MutS domain III CDIF29020_RS18095 PF05188 MutS domain II CDIF29020_RS18095 PF00488 MutS domain V CDIF29020_RS18100 PF02603 HPr Serine kinase N terminus CDIF29020_RS18100 PF07475 HPr Serine kinase C-terminal domain CDIF29020_RS18105 PF01541 GIY-YIG catalytic domain CDIF29020_RS18105 PF08459 UvrC Helix-hairpin-helix N-terminal CDIF29020_RS18105 PF02151 UvrB/uvrC motif CDIF29020_RS18105 PF12826 Helix-hairpin-helix motif CDIF29020_RS18110 PF17760 UvrA interaction domain CDIF29020_RS18110 PF17755 UvrA DNA-binding domain CDIF29020_RS18115 PF12344 Ultra-violet resistance protein B CDIF29020_RS18115 PF00271 Helicase conserved C-terminal domain CDIF29020_RS18115 PF17757 UvrB interaction domain CDIF29020_RS18115 PF02151 UvrB/uvrC motif CDIF29020_RS18115 PF04851 Type III restriction enzyme, res subunit CDIF29020_RS18125 PF13416 Bacterial extracellular solute-binding protein CDIF29020_RS18130 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS18135 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS18140 PF00005 ABC transporter CDIF29020_RS18140 PF17912 MalK OB fold domain CDIF29020_RS18140 PF03459 TOBE domain CDIF29020_RS18160 PF14824 Sirohaem biosynthesis protein central CDIF29020_RS18160 PF10414 Sirohaem synthase dimerisation region CDIF29020_RS18160 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18165 PF00490 Delta-aminolevulinic acid dehydratase CDIF29020_RS18170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18170 PF02602 Uroporphyrinogen-III synthase HemD CDIF29020_RS18175 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDIF29020_RS18175 PF03900 Porphobilinogen deaminase, C-terminal domain CDIF29020_RS18180 PF06180 Cobalt chelatase (CbiK) CDIF29020_RS18185 PF02571 Precorrin-6x reductase CbiJ/CobK CDIF29020_RS18190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18195 PF01890 Cobalamin synthesis G C-terminus CDIF29020_RS18195 PF11760 Cobalamin synthesis G N-terminal CDIF29020_RS18195 PF11761 Cobalamin biosynthesis central region CDIF29020_RS18200 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18205 PF05175 Methyltransferase small domain CDIF29020_RS18210 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18215 PF01888 CbiD CDIF29020_RS18220 PF02570 Precorrin-8X methylmutase CDIF29020_RS18225 PF00288 GHMP kinases N terminal domain CDIF29020_RS18230 PF00155 Aminotransferase class I and II CDIF29020_RS18235 PF03186 CobD/Cbib protein CDIF29020_RS18240 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDIF29020_RS18240 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29020_RS18245 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDIF29020_RS18255 PF02654 Cobalamin-5-phosphate synthase CDIF29020_RS18260 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDIF29020_RS18265 PF02277 Phosphoribosyltransferase CDIF29020_RS18285 PF00155 Aminotransferase class I and II CDIF29020_RS18290 PF00557 Metallopeptidase family M24 CDIF29020_RS18290 PF01321 Creatinase/Prolidase N-terminal domain CDIF29020_RS18295 PF02378 Phosphotransferase system, EIIC CDIF29020_RS18295 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS18300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS18305 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29020_RS18310 PF05343 M42 glutamyl aminopeptidase CDIF29020_RS18315 PF03123 CAT RNA binding domain CDIF29020_RS18315 PF00874 PRD domain CDIF29020_RS18320 PF01116 Fructose-bisphosphate aldolase class-II CDIF29020_RS18325 PF01380 SIS domain CDIF29020_RS18330 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDIF29020_RS18335 PF00294 pfkB family carbohydrate kinase CDIF29020_RS18340 PF07702 UTRA domain CDIF29020_RS18340 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS18345 PF01979 Amidohydrolase family CDIF29020_RS18350 PF01471 Putative peptidoglycan binding domain CDIF29020_RS18350 PF17820 PDZ domain CDIF29020_RS18350 PF03572 Peptidase family S41 CDIF29020_RS18355 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDIF29020_RS18370 PF02780 Transketolase, C-terminal domain CDIF29020_RS18370 PF02779 Transketolase, pyrimidine binding domain CDIF29020_RS18375 PF00456 Transketolase, thiamine diphosphate binding domain CDIF29020_RS18380 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CDIF29020_RS18390 PF01168 Alanine racemase, N-terminal domain CDIF29020_RS18390 PF00842 Alanine racemase, C-terminal domain CDIF29020_RS18400 PF00478 IMP dehydrogenase / GMP reductase domain CDIF29020_RS18400 PF00571 CBS domain CDIF29020_RS18405 PF01648 4'-phosphopantetheinyl transferase superfamily CDIF29020_RS18410 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDIF29020_RS18410 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDIF29020_RS18415 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29020_RS18415 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29020_RS18420 PF00231 ATP synthase CDIF29020_RS18425 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29020_RS18425 PF00306 ATP synthase alpha/beta chain, C terminal domain CDIF29020_RS18425 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29020_RS18430 PF00213 ATP synthase delta (OSCP) subunit CDIF29020_RS18435 PF00430 ATP synthase B/B' CF(0) CDIF29020_RS18440 PF00137 ATP synthase subunit C CDIF29020_RS18445 PF00119 ATP synthase A chain CDIF29020_RS18470 PF13478 XdhC Rossmann domain CDIF29020_RS18470 PF02625 XdhC and CoxI family CDIF29020_RS18480 PF02502 Ribose/Galactose Isomerase CDIF29020_RS18485 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDIF29020_RS18490 PF03481 Putative GTP-binding controlling metal-binding CDIF29020_RS18490 PF01300 Telomere recombination CDIF29020_RS18500 PF03462 PCRF domain CDIF29020_RS18500 PF00472 RF-1 domain CDIF29020_RS18505 PF17827 PrmC N-terminal domain CDIF29020_RS18505 PF05175 Methyltransferase small domain CDIF29020_RS18510 PF07136 Protein of unknown function (DUF1385) CDIF29020_RS18515 PF01197 Ribosomal protein L31 CDIF29020_RS18520 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29020_RS18520 PF07498 Rho termination factor, N-terminal domain CDIF29020_RS18520 PF07497 Rho termination factor, RNA-binding domain CDIF29020_RS18525 PF00483 Nucleotidyl transferase CDIF29020_RS18530 PF08439 Oligopeptidase F CDIF29020_RS18530 PF01432 Peptidase family M3 CDIF29020_RS18535 PF07228 Stage II sporulation protein E (SpoIIE) CDIF29020_RS18540 PF02541 Ppx/GppA phosphatase family CDIF29020_RS18560 PF01479 S4 domain CDIF29020_RS18565 PF00216 Bacterial DNA-binding protein CDIF29020_RS18570 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18570 PF03819 MazG nucleotide pyrophosphohydrolase domain CDIF29020_RS18575 PF14667 Polysaccharide biosynthesis C-terminal domain CDIF29020_RS18575 PF01943 Polysaccharide biosynthesis protein CDIF29020_RS18580 PF15714 Stage V sporulation protein T C-terminal, transcription factor CDIF29020_RS18580 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CDIF29020_RS18590 PF03461 TRCF domain CDIF29020_RS18590 PF00271 Helicase conserved C-terminal domain CDIF29020_RS18590 PF17757 UvrB interaction domain CDIF29020_RS18590 PF00270 DEAD/DEAH box helicase CDIF29020_RS18590 PF02559 CarD-like/TRCF domain CDIF29020_RS18595 PF01195 Peptidyl-tRNA hydrolase CDIF29020_RS18605 PF01478 Type IV leader peptidase family CDIF29020_RS18605 PF06750 Bacterial Peptidase A24 N-terminal domain CDIF29020_RS18610 PF00437 Type II/IV secretion system protein CDIF29020_RS18640 PF00482 Type II secretion system (T2SS), protein F CDIF29020_RS18645 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDIF29020_RS18645 PF00437 Type II/IV secretion system protein CDIF29020_RS18655 PF14572 Phosphoribosyl synthetase-associated domain CDIF29020_RS18655 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDIF29020_RS18660 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29020_RS18660 PF00483 Nucleotidyl transferase CDIF29020_RS18660 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29020_RS18665 PF04026 SpoVG CDIF29020_RS18670 PF00156 Phosphoribosyl transferase domain CDIF29020_RS18670 PF09182 Bacterial purine repressor, N-terminal CDIF29020_RS18675 PF08245 Mur ligase middle domain CDIF29020_RS18675 PF01225 Mur ligase family, catalytic domain CDIF29020_RS18675 PF02875 Mur ligase family, glutamate ligase domain CDIF29020_RS18685 PF16916 Dimerisation domain of Zinc Transporter CDIF29020_RS18685 PF01545 Cation efflux family CDIF29020_RS18690 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS18690 PF07687 Peptidase dimerisation domain CDIF29020_RS18700 PF00398 Ribosomal RNA adenine dimethylase CDIF29020_RS18705 PF13331 Domain of unknown function (DUF4093) CDIF29020_RS18705 PF01751 Toprim domain CDIF29020_RS18715 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29020_RS18720 PF00005 ABC transporter CDIF29020_RS18725 PF02811 PHP domain CDIF29020_RS18735 PF01026 TatD related DNase CDIF29020_RS18740 PF08264 Anticodon-binding domain of tRNA CDIF29020_RS18740 PF09334 tRNA synthetases class I (M) CDIF29020_RS18740 PF01588 Putative tRNA binding domain CDIF29020_RS18745 PF07670 Nucleoside recognition CDIF29020_RS18755 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDIF29020_RS18755 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CDIF29020_RS18755 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDIF29020_RS18760 PF01037 Lrp/AsnC ligand binding domain CDIF29020_RS18765 PF01966 HD domain CDIF29020_RS18765 PF01743 Poly A polymerase head domain CDIF29020_RS18765 PF12627 Probable RNA and SrmB- binding site of polymerase A CDIF29020_RS18770 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29020_RS18775 PF05175 Methyltransferase small domain CDIF29020_RS18780 PF04468 PSP1 C-terminal conserved region CDIF29020_RS18785 PF09115 DNA polymerase III, delta subunit, C terminal CDIF29020_RS18795 PF01276 Orn/Lys/Arg decarboxylase, major domain CDIF29020_RS18795 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDIF29020_RS18800 PF04070 Domain of unknown function (DUF378) CDIF29020_RS18825 PF00152 tRNA synthetases class II (D, K and N) CDIF29020_RS18825 PF01336 OB-fold nucleic acid binding domain CDIF29020_RS18830 PF03449 Transcription elongation factor, N-terminal CDIF29020_RS18830 PF01272 Transcription elongation factor, GreA/GreB, C-term CDIF29020_RS18835 PF01207 Dihydrouridine synthase (Dus) CDIF29020_RS18840 PF03309 Type III pantothenate kinase CDIF29020_RS18850 PF03576 Peptidase family S58 CDIF29020_RS18855 PF08279 HTH domain CDIF29020_RS18855 PF03099 Biotin/lipoate A/B protein ligase family CDIF29020_RS18855 PF02237 Biotin protein ligase C terminal domain CDIF29020_RS18860 PF01434 Peptidase family M41 CDIF29020_RS18860 PF17862 AAA+ lid domain CDIF29020_RS18860 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29020_RS18865 PF01171 PP-loop family CDIF29020_RS18865 PF11734 TilS substrate C-terminal domain CDIF29020_RS18875 PF01177 Asp/Glu/Hydantoin racemase CDIF29020_RS18880 PF01471 Putative peptidoglycan binding domain CDIF29020_RS18880 PF07486 Cell Wall Hydrolase CDIF29020_RS18885 PF09551 Stage II sporulation protein R (spore_II_R) CDIF29020_RS18890 PF07729 FCD domain CDIF29020_RS18890 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS18895 PF08544 GHMP kinases C terminal CDIF29020_RS18895 PF00288 GHMP kinases N terminal domain CDIF29020_RS18910 PF05582 YabG peptidase U57 CDIF29020_RS18915 PF01244 Membrane dipeptidase (Peptidase family M19) CDIF29020_RS18925 PF01043 SecA preprotein cross-linking domain CDIF29020_RS18925 PF07516 SecA Wing and Scaffold domain CDIF29020_RS18925 PF07517 SecA DEAD-like domain CDIF29020_RS18925 PF02810 SEC-C motif CDIF29020_RS18950 PF07690 Major Facilitator Superfamily CDIF29020_RS18955 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29020_RS18960 PF02796 Helix-turn-helix domain of resolvase CDIF29020_RS18960 PF00239 Resolvase, N terminal domain CDIF29020_RS18975 PF10672 S-adenosylmethionine-dependent methyltransferase CDIF29020_RS18980 PF00849 RNA pseudouridylate synthase CDIF29020_RS18980 PF01479 S4 domain CDIF29020_RS18985 PF06445 GyrI-like small molecule binding domain CDIF29020_RS18985 PF13411 MerR HTH family regulatory protein CDIF29020_RS18995 PF12704 MacB-like periplasmic core domain CDIF29020_RS18995 PF02687 FtsX-like permease family CDIF29020_RS18995 PF00005 ABC transporter CDIF29020_RS19000 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS19000 PF00672 HAMP domain CDIF29020_RS19000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS19005 PF00072 Response regulator receiver domain CDIF29020_RS19005 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS19010 PF03551 Transcriptional regulator PadR-like family CDIF29020_RS19025 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDIF29020_RS19025 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29020_RS19025 PF02142 MGS-like domain CDIF29020_RS19030 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDIF29020_RS19030 PF00117 Glutamine amidotransferase class-I CDIF29020_RS19035 PF02142 MGS-like domain CDIF29020_RS19035 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDIF29020_RS19035 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29020_RS19040 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDIF29020_RS19040 PF00117 Glutamine amidotransferase class-I CDIF29020_RS19045 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDIF29020_RS19060 PF02073 Thermophilic metalloprotease (M29) CDIF29020_RS19065 PF02574 Homocysteine S-methyltransferase CDIF29020_RS19065 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDIF29020_RS19065 PF00809 Pterin binding enzyme CDIF29020_RS19065 PF02607 B12 binding domain CDIF29020_RS19065 PF02310 B12 binding domain CDIF29020_RS19075 PF02664 S-Ribosylhomocysteinase (LuxS) CDIF29020_RS19080 PF00512 His Kinase A (phospho-acceptor) domain CDIF29020_RS19080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29020_RS19085 PF00072 Response regulator receiver domain CDIF29020_RS19085 PF00486 Transcriptional regulatory protein, C terminal CDIF29020_RS19090 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29020_RS19095 PF01171 PP-loop family CDIF29020_RS19100 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDIF29020_RS19100 PF00149 Calcineurin-like phosphoesterase CDIF29020_RS19105 PF01370 NAD dependent epimerase/dehydratase family CDIF29020_RS19110 PF13419 Haloacid dehalogenase-like hydrolase CDIF29020_RS19120 PF01979 Amidohydrolase family CDIF29020_RS19130 PF12857 TOBE-like domain CDIF29020_RS19130 PF00005 ABC transporter CDIF29020_RS19140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29020_RS19145 PF01554 MatE CDIF29020_RS19160 PF13411 MerR HTH family regulatory protein CDIF29020_RS19160 PF06445 GyrI-like small molecule binding domain CDIF29020_RS19165 PF00999 Sodium/hydrogen exchanger family CDIF29020_RS19165 PF02080 TrkA-C domain CDIF29020_RS19165 PF03471 Transporter associated domain CDIF29020_RS19170 PF10026 Predicted Zn-dependent protease (DUF2268) CDIF29020_RS19180 PF13673 Acetyltransferase (GNAT) domain CDIF29020_RS19180 PF00958 GMP synthase C terminal domain CDIF29020_RS19180 PF00117 Glutamine amidotransferase class-I CDIF29020_RS19180 PF13302 Acetyltransferase (GNAT) domain CDIF29020_RS19180 PF03352 Methyladenine glycosylase CDIF29020_RS19190 PF00805 Pentapeptide repeats (8 copies) CDIF29020_RS19195 PF03831 PhnA domain CDIF29020_RS19195 PF08274 PhnA Zinc-Ribbon CDIF29020_RS19200 PF12704 MacB-like periplasmic core domain CDIF29020_RS19200 PF00005 ABC transporter CDIF29020_RS19200 PF02687 FtsX-like permease family CDIF29020_RS19210 PF05231 MASE1 CDIF29020_RS19210 PF00990 Diguanylate cyclase, GGDEF domain CDIF29020_RS19210 PF00563 EAL domain CDIF29020_RS19210 PF13426 PAS domain CDIF29020_RS19210 PF08448 PAS fold CDIF29020_RS19210 PF08447 PAS fold CDIF29020_RS19215 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS19220 PF07687 Peptidase dimerisation domain CDIF29020_RS19220 PF01546 Peptidase family M20/M25/M40 CDIF29020_RS19230 PF02581 Thiamine monophosphate synthase CDIF29020_RS19235 PF00701 Dihydrodipicolinate synthetase family CDIF29020_RS19240 PF00571 CBS domain CDIF29020_RS19240 PF01380 SIS domain CDIF29020_RS19250 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS19260 PF00857 Isochorismatase family CDIF29020_RS19290 PF03466 LysR substrate binding domain CDIF29020_RS19290 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29020_RS19295 PF00294 pfkB family carbohydrate kinase CDIF29020_RS19300 PF07071 KDGP aldolase CDIF29020_RS19305 PF03841 L-seryl-tRNA selenium transferase CDIF29020_RS19310 PF01979 Amidohydrolase family CDIF29020_RS19320 PF02378 Phosphotransferase system, EIIC CDIF29020_RS19325 PF00392 Bacterial regulatory proteins, gntR family CDIF29020_RS19325 PF07702 UTRA domain CDIF29020_RS19330 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29020_RS19335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29020_RS19340 PF02590 Predicted SPOUT methyltransferase CDIF29020_RS19345 PF02378 Phosphotransferase system, EIIC CDIF29020_RS19350 PF00753 Metallo-beta-lactamase superfamily CDIF29020_RS19365 PF01695 IstB-like ATP binding protein CDIF29020_RS19390 PF00709 Adenylosuccinate synthetase CDIF29020_RS19400 PF03796 DnaB-like helicase C terminal domain CDIF29020_RS19400 PF00772 DnaB-like helicase N terminal domain CDIF29020_RS19405 PF03948 Ribosomal protein L9, C-terminal domain CDIF29020_RS19405 PF01281 Ribosomal protein L9, N-terminal domain CDIF29020_RS19410 PF01368 DHH family CDIF29020_RS19410 PF02272 DHHA1 domain CDIF29020_RS19425 PF01084 Ribosomal protein S18 CDIF29020_RS19430 PF00436 Single-strand binding protein family CDIF29020_RS19435 PF01250 Ribosomal protein S6 CDIF29020_RS19440 PF00155 Aminotransferase class I and II CDIF29020_RS19455 PF01206 Sulfurtransferase TusA CDIF29020_RS19470 PF00266 Aminotransferase class-V CDIF29020_RS19475 PF17762 HTH domain found in ParB protein CDIF29020_RS19475 PF02195 ParB-like nuclease domain CDIF29020_RS19480 PF13614 AAA domain CDIF29020_RS19485 PF17762 HTH domain found in ParB protein CDIF29020_RS19485 PF02195 ParB-like nuclease domain CDIF29020_RS19490 PF02527 rRNA small subunit methyltransferase G CDIF29020_RS19495 PF13932 GidA associated domain CDIF29020_RS19495 PF01134 Glucose inhibited division protein A CDIF29020_RS19500 PF12631 MnmE helical domain CDIF29020_RS19500 PF01926 50S ribosome-binding GTPase CDIF29020_RS19500 PF10396 GTP-binding protein TrmE N-terminus CDIF29020_RS19505 PF01424 R3H domain CDIF29020_RS19505 PF14804 Jag N-terminus CDIF29020_RS19510 PF02096 60Kd inner membrane protein CDIF29020_RS19515 PF01809 Putative membrane protein insertion efficiency factor CDIF29020_RS19520 PF00825 Ribonuclease P CDIF29020_RS19525 PF00468 Ribosomal protein L34