locus-tag class description CDIF29627_RS00005 PF11638 DnaA N-terminal domain CDIF29627_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CDIF29627_RS00005 PF00308 Bacterial dnaA protein CDIF29627_RS00010 PF02767 DNA polymerase III beta subunit, central domain CDIF29627_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CDIF29627_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CDIF29627_RS00020 PF02463 RecF/RecN/SMC N terminal domain CDIF29627_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CDIF29627_RS00025 PF01751 Toprim domain CDIF29627_RS00025 PF00204 DNA gyrase B CDIF29627_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CDIF29627_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CDIF29627_RS00045 PF01740 STAS domain CDIF29627_RS00050 PF13581 Histidine kinase-like ATPase domain CDIF29627_RS00055 PF04545 Sigma-70, region 4 CDIF29627_RS00055 PF04542 Sigma-70 region 2 CDIF29627_RS00055 PF04539 Sigma-70 region 3 CDIF29627_RS00105 PF08279 HTH domain CDIF29627_RS00105 PF02829 3H domain CDIF29627_RS00110 PF05552 Conserved TM helix CDIF29627_RS00110 PF00924 Mechanosensitive ion channel CDIF29627_RS00115 PF02403 Seryl-tRNA synthetase N-terminal domain CDIF29627_RS00115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29627_RS00120 PF14437 MafB19-like deaminase CDIF29627_RS00135 PF12169 DNA polymerase III subunits gamma and tau domain III CDIF29627_RS00140 PF02575 YbaB/EbfC DNA-binding family CDIF29627_RS00145 PF13662 Toprim domain CDIF29627_RS00145 PF02132 RecR protein CDIF29627_RS00155 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29627_RS00155 PF00534 Glycosyl transferases group 1 CDIF29627_RS00395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29627_RS00395 PF02436 Conserved carboxylase domain CDIF29627_RS00395 PF00289 Biotin carboxylase, N-terminal domain CDIF29627_RS00395 PF02785 Biotin carboxylase C-terminal domain CDIF29627_RS00395 PF00682 HMGL-like CDIF29627_RS00395 PF00364 Biotin-requiring enzyme CDIF29627_RS00400 PF14492 Elongation Factor G, domain II CDIF29627_RS00400 PF03144 Elongation factor Tu domain 2 CDIF29627_RS00400 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS00400 PF03764 Elongation factor G, domain IV CDIF29627_RS00400 PF00679 Elongation factor G C-terminus CDIF29627_RS00405 PF05848 CtsR N-terminal HTH domain CDIF29627_RS00405 PF17727 CtsR C-terminal dimerization domain CDIF29627_RS00410 PF02151 UvrB/uvrC motif CDIF29627_RS00415 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CDIF29627_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS00420 PF17871 AAA lid domain CDIF29627_RS00420 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29627_RS00420 PF07724 AAA domain (Cdc48 subfamily) CDIF29627_RS00420 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29627_RS00425 PF18073 Rubredoxin metal binding domain CDIF29627_RS00430 PF10635 DisA bacterial checkpoint controller linker region CDIF29627_RS00430 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDIF29627_RS00455 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CDIF29627_RS00455 PF04616 Glycosyl hydrolases family 43 CDIF29627_RS00465 PF04198 Putative sugar-binding domain CDIF29627_RS00470 PF00676 Dehydrogenase E1 component CDIF29627_RS00475 PF02779 Transketolase, pyrimidine binding domain CDIF29627_RS00475 PF02780 Transketolase, C-terminal domain CDIF29627_RS00480 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDIF29627_RS00480 PF00364 Biotin-requiring enzyme CDIF29627_RS00480 PF02817 e3 binding domain CDIF29627_RS00485 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29627_RS00485 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS00490 PF00158 Sigma-54 interaction domain CDIF29627_RS00490 PF00874 PRD domain CDIF29627_RS00490 PF03610 PTS system fructose IIA component CDIF29627_RS00500 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS00505 PF03611 PTS system sugar-specific permease component CDIF29627_RS00515 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29627_RS00520 PF10437 Bacterial lipoate protein ligase C-terminus CDIF29627_RS00520 PF03099 Biotin/lipoate A/B protein ligase family CDIF29627_RS00525 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDIF29627_RS00530 PF02542 YgbB family CDIF29627_RS00535 PF04073 Aminoacyl-tRNA editing domain CDIF29627_RS00535 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29627_RS00535 PF03129 Anticodon binding domain CDIF29627_RS00540 PF03129 Anticodon binding domain CDIF29627_RS00540 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29627_RS00540 PF09180 Prolyl-tRNA synthetase, C-terminal CDIF29627_RS00545 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDIF29627_RS00555 PF01406 tRNA synthetases class I (C) catalytic domain CDIF29627_RS00555 PF09190 DALR domain CDIF29627_RS00560 PF00636 Ribonuclease III domain CDIF29627_RS00565 PF02511 Thymidylate synthase complementing protein CDIF29627_RS00570 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDIF29627_RS00570 PF00588 SpoU rRNA Methylase family CDIF29627_RS00575 PF05991 YacP-like NYN domain CDIF29627_RS00580 PF04542 Sigma-70 region 2 CDIF29627_RS00580 PF08281 Sigma-70, region 4 CDIF29627_RS00585 PF03144 Elongation factor Tu domain 2 CDIF29627_RS00585 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS00585 PF03143 Elongation factor Tu C-terminal domain CDIF29627_RS00590 PF00471 Ribosomal protein L33 CDIF29627_RS00600 PF00467 KOW motif CDIF29627_RS00600 PF02357 Transcription termination factor nusG CDIF29627_RS00605 PF03946 Ribosomal protein L11, N-terminal domain CDIF29627_RS00605 PF00298 Ribosomal protein L11, RNA binding domain CDIF29627_RS00610 PF00687 Ribosomal protein L1p/L10e family CDIF29627_RS00615 PF00466 Ribosomal protein L10 CDIF29627_RS00620 PF00542 Ribosomal protein L7/L12 C-terminal domain CDIF29627_RS00620 PF16320 Ribosomal protein L7/L12 dimerisation domain CDIF29627_RS00630 PF04563 RNA polymerase beta subunit CDIF29627_RS00630 PF04561 RNA polymerase Rpb2, domain 2 CDIF29627_RS00630 PF04565 RNA polymerase Rpb2, domain 3 CDIF29627_RS00630 PF10385 RNA polymerase beta subunit external 1 domain CDIF29627_RS00630 PF00562 RNA polymerase Rpb2, domain 6 CDIF29627_RS00630 PF04560 RNA polymerase Rpb2, domain 7 CDIF29627_RS00635 PF04983 RNA polymerase Rpb1, domain 3 CDIF29627_RS00635 PF05000 RNA polymerase Rpb1, domain 4 CDIF29627_RS00635 PF00623 RNA polymerase Rpb1, domain 2 CDIF29627_RS00635 PF04997 RNA polymerase Rpb1, domain 1 CDIF29627_RS00635 PF04998 RNA polymerase Rpb1, domain 5 CDIF29627_RS00640 PF00164 Ribosomal protein S12/S23 CDIF29627_RS00645 PF00177 Ribosomal protein S7p/S5e CDIF29627_RS00650 PF03144 Elongation factor Tu domain 2 CDIF29627_RS00650 PF00679 Elongation factor G C-terminus CDIF29627_RS00650 PF14492 Elongation Factor G, domain II CDIF29627_RS00650 PF03764 Elongation factor G, domain IV CDIF29627_RS00650 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS00655 PF03143 Elongation factor Tu C-terminal domain CDIF29627_RS00655 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS00655 PF03144 Elongation factor Tu domain 2 CDIF29627_RS00660 PF00338 Ribosomal protein S10p/S20e CDIF29627_RS00665 PF00297 Ribosomal protein L3 CDIF29627_RS00670 PF00573 Ribosomal protein L4/L1 family CDIF29627_RS00675 PF00276 Ribosomal protein L23 CDIF29627_RS00680 PF00181 Ribosomal Proteins L2, RNA binding domain CDIF29627_RS00680 PF03947 Ribosomal Proteins L2, C-terminal domain CDIF29627_RS00685 PF00203 Ribosomal protein S19 CDIF29627_RS00690 PF00237 Ribosomal protein L22p/L17e CDIF29627_RS00695 PF07650 KH domain CDIF29627_RS00695 PF00189 Ribosomal protein S3, C-terminal domain CDIF29627_RS00700 PF00252 Ribosomal protein L16p/L10e CDIF29627_RS00705 PF00831 Ribosomal L29 protein CDIF29627_RS00710 PF00366 Ribosomal protein S17 CDIF29627_RS00715 PF00238 Ribosomal protein L14p/L23e CDIF29627_RS00720 PF00467 KOW motif CDIF29627_RS00720 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDIF29627_RS00725 PF00281 Ribosomal protein L5 CDIF29627_RS00725 PF00673 ribosomal L5P family C-terminus CDIF29627_RS00730 PF00253 Ribosomal protein S14p/S29e CDIF29627_RS00735 PF00410 Ribosomal protein S8 CDIF29627_RS00740 PF00347 Ribosomal protein L6 CDIF29627_RS00745 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDIF29627_RS00750 PF00333 Ribosomal protein S5, N-terminal domain CDIF29627_RS00750 PF03719 Ribosomal protein S5, C-terminal domain CDIF29627_RS00755 PF00327 Ribosomal protein L30p/L7e CDIF29627_RS00760 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDIF29627_RS00765 PF00344 SecY translocase CDIF29627_RS00770 PF05191 Adenylate kinase, active site lid CDIF29627_RS00775 PF00557 Metallopeptidase family M24 CDIF29627_RS00785 PF01176 Translation initiation factor 1A / IF-1 CDIF29627_RS00790 PF00444 Ribosomal protein L36 CDIF29627_RS00795 PF00416 Ribosomal protein S13/S18 CDIF29627_RS00800 PF00411 Ribosomal protein S11 CDIF29627_RS00805 PF00163 Ribosomal protein S4/S9 N-terminal domain CDIF29627_RS00805 PF01479 S4 domain CDIF29627_RS00810 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDIF29627_RS00810 PF01000 RNA polymerase Rpb3/RpoA insert domain CDIF29627_RS00810 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDIF29627_RS00815 PF01196 Ribosomal protein L17 CDIF29627_RS00820 PF00005 ABC transporter CDIF29627_RS00825 PF00005 ABC transporter CDIF29627_RS00830 PF02361 Cobalt transport protein CDIF29627_RS00835 PF01416 tRNA pseudouridine synthase CDIF29627_RS00840 PF00572 Ribosomal protein L13 CDIF29627_RS00845 PF00380 Ribosomal protein S9/S16 CDIF29627_RS00850 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS00985 PF00155 Aminotransferase class I and II CDIF29627_RS00990 PF03477 ATP cone domain CDIF29627_RS00990 PF13597 Anaerobic ribonucleoside-triphosphate reductase CDIF29627_RS00995 PF04055 Radical SAM superfamily CDIF29627_RS01095 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDIF29627_RS01110 PF01515 Phosphate acetyl/butaryl transferase CDIF29627_RS01115 PF00871 Acetokinase family CDIF29627_RS01145 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29627_RS01145 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29627_RS01145 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29627_RS01145 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29627_RS01150 PF01380 SIS domain CDIF29627_RS01155 PF00581 Rhodanese-like domain CDIF29627_RS01165 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDIF29627_RS01170 PF08486 Stage II sporulation protein CDIF29627_RS01180 PF12116 Stage III sporulation protein D CDIF29627_RS01190 PF07977 FabA-like domain CDIF29627_RS01195 PF06866 Protein of unknown function (DUF1256) CDIF29627_RS01200 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDIF29627_RS01200 PF02772 S-adenosylmethionine synthetase, central domain CDIF29627_RS01200 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDIF29627_RS01210 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CDIF29627_RS01210 PF14490 Helix-hairpin-helix containing domain CDIF29627_RS01210 PF13538 UvrD-like helicase C-terminal domain CDIF29627_RS01220 PF08279 HTH domain CDIF29627_RS01220 PF00874 PRD domain CDIF29627_RS01220 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS01220 PF05043 Mga helix-turn-helix domain CDIF29627_RS01225 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29627_RS01230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS01235 PF02378 Phosphotransferase system, EIIC CDIF29627_RS01245 PF01112 Asparaginase CDIF29627_RS01250 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS01255 PF03932 CutC family CDIF29627_RS01260 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDIF29627_RS01260 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDIF29627_RS01265 PF07516 SecA Wing and Scaffold domain CDIF29627_RS01265 PF02810 SEC-C motif CDIF29627_RS01265 PF01043 SecA preprotein cross-linking domain CDIF29627_RS01265 PF07517 SecA DEAD-like domain CDIF29627_RS01270 PF00472 RF-1 domain CDIF29627_RS01270 PF03462 PCRF domain CDIF29627_RS01275 PF16921 Tex protein YqgF-like domain CDIF29627_RS01275 PF17674 HHH domain CDIF29627_RS01275 PF00575 S1 RNA binding domain CDIF29627_RS01275 PF09371 Tex-like protein N-terminal domain CDIF29627_RS01280 PF01979 Amidohydrolase family CDIF29627_RS01295 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDIF29627_RS01300 PF00814 Glycoprotease family CDIF29627_RS01305 PF00583 Acetyltransferase (GNAT) family CDIF29627_RS01310 PF00814 Glycoprotease family CDIF29627_RS01315 PF01228 Glycine radical CDIF29627_RS01315 PF02901 Pyruvate formate lyase-like CDIF29627_RS01320 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal CDIF29627_RS01320 PF18524 High potential iron-sulfur protein like CDIF29627_RS01325 PF04055 Radical SAM superfamily CDIF29627_RS01345 PF13520 Amino acid permease CDIF29627_RS01350 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS01350 PF07687 Peptidase dimerisation domain CDIF29627_RS01355 PF00158 Sigma-54 interaction domain CDIF29627_RS01355 PF13426 PAS domain CDIF29627_RS01355 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS01370 PF01554 MatE CDIF29627_RS01375 PF00005 ABC transporter CDIF29627_RS01375 PF16326 ABC transporter C-terminal domain CDIF29627_RS01375 PF12848 ABC transporter CDIF29627_RS01380 PF02629 CoA binding domain CDIF29627_RS01380 PF06971 Putative DNA-binding protein N-terminus CDIF29627_RS01390 PF12838 4Fe-4S dicluster domain CDIF29627_RS01400 PF03063 Prismane/CO dehydrogenase family CDIF29627_RS01410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS01425 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDIF29627_RS01425 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDIF29627_RS01430 PF05569 BlaR1 peptidase M56 CDIF29627_RS01430 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS01450 PF00877 NlpC/P60 family CDIF29627_RS01450 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CDIF29627_RS01455 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDIF29627_RS01455 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDIF29627_RS01460 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29627_RS01465 PF01180 Dihydroorotate dehydrogenase CDIF29627_RS01470 PF00156 Phosphoribosyl transferase domain CDIF29627_RS01475 PF02558 Ketopantoate reductase PanE/ApbA CDIF29627_RS01475 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDIF29627_RS01480 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS01480 PF03466 LysR substrate binding domain CDIF29627_RS01485 PF03601 Conserved hypothetical protein 698 CDIF29627_RS01495 PF13396 Phospholipase_D-nuclease N-terminal CDIF29627_RS01495 PF13091 PLD-like domain CDIF29627_RS01500 PF00166 Chaperonin 10 Kd subunit CDIF29627_RS01505 PF00118 TCP-1/cpn60 chaperonin family CDIF29627_RS01510 PF00731 AIR carboxylase CDIF29627_RS01515 PF01969 Protein of unknown function DUF111 CDIF29627_RS01520 PF01969 Protein of unknown function DUF111 CDIF29627_RS01525 PF00117 Glutamine amidotransferase class-I CDIF29627_RS01525 PF00958 GMP synthase C terminal domain CDIF29627_RS01525 PF02540 NAD synthase CDIF29627_RS01540 PF03466 LysR substrate binding domain CDIF29627_RS01540 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS01560 PF17760 UvrA interaction domain CDIF29627_RS01560 PF17755 UvrA DNA-binding domain CDIF29627_RS01560 PF00005 ABC transporter CDIF29627_RS01565 PF00196 Bacterial regulatory proteins, luxR family CDIF29627_RS01565 PF00563 EAL domain CDIF29627_RS01585 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS01595 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS01610 PF00881 Nitroreductase family CDIF29627_RS01615 PF00731 AIR carboxylase CDIF29627_RS01620 PF01259 SAICAR synthetase CDIF29627_RS01625 PF00156 Phosphoribosyl transferase domain CDIF29627_RS01630 PF02769 AIR synthase related protein, C-terminal domain CDIF29627_RS01630 PF00586 AIR synthase related protein, N-terminal domain CDIF29627_RS01635 PF00551 Formyl transferase CDIF29627_RS01640 PF02142 MGS-like domain CDIF29627_RS01640 PF01808 AICARFT/IMPCHase bienzyme CDIF29627_RS01645 PF02844 Phosphoribosylglycinamide synthetase, N domain CDIF29627_RS01645 PF02843 Phosphoribosylglycinamide synthetase, C domain CDIF29627_RS01645 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDIF29627_RS01650 PF02769 AIR synthase related protein, C-terminal domain CDIF29627_RS01650 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDIF29627_RS01650 PF00586 AIR synthase related protein, N-terminal domain CDIF29627_RS01655 PF01464 Transglycosylase SLT domain CDIF29627_RS01660 PF03885 Protein of unknown function (DUF327) CDIF29627_RS01665 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDIF29627_RS01690 PF02623 FliW protein CDIF29627_RS01695 PF02599 Global regulator protein family CDIF29627_RS01710 PF02465 Flagellar hook-associated protein 2 N-terminus CDIF29627_RS01710 PF07195 Flagellar hook-associated protein 2 C-terminus CDIF29627_RS01720 PF00669 Bacterial flagellin N-terminal helical region CDIF29627_RS01720 PF00700 Bacterial flagellin C-terminal helical region CDIF29627_RS01725 PF00535 Glycosyl transferase family 2 CDIF29627_RS01735 PF02348 Cytidylyltransferase CDIF29627_RS01750 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29627_RS01750 PF00460 Flagella basal body rod protein CDIF29627_RS01755 PF00460 Flagella basal body rod protein CDIF29627_RS01755 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29627_RS01760 PF02049 Flagellar hook-basal body complex protein FliE CDIF29627_RS01765 PF01514 Secretory protein of YscJ/FliF family CDIF29627_RS01765 PF08345 Flagellar M-ring protein C-terminal CDIF29627_RS01770 PF01706 FliG C-terminal domain CDIF29627_RS01770 PF14842 FliG N-terminal domain CDIF29627_RS01770 PF14841 FliG middle domain CDIF29627_RS01780 PF18269 T3SS EscN ATPase C-terminal domain CDIF29627_RS01780 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29627_RS01780 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS01795 PF03963 Flagellar hook capping protein - N-terminal region CDIF29627_RS01800 PF00460 Flagella basal body rod protein CDIF29627_RS01800 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29627_RS01810 PF01618 MotA/TolQ/ExbB proton channel family CDIF29627_RS01815 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDIF29627_RS01815 PF00691 OmpA family CDIF29627_RS01830 PF00813 FliP family CDIF29627_RS01835 PF01313 Bacterial export proteins, family 3 CDIF29627_RS01840 PF01312 FlhB HrpN YscU SpaS Family CDIF29627_RS01845 PF00771 FHIPEP family CDIF29627_RS01850 PF00448 SRP54-type protein, GTPase domain CDIF29627_RS01855 PF10609 NUBPL iron-transfer P-loop NTPase CDIF29627_RS01860 PF04539 Sigma-70 region 3 CDIF29627_RS01860 PF04542 Sigma-70 region 2 CDIF29627_RS01860 PF04545 Sigma-70, region 4 CDIF29627_RS01875 PF00460 Flagella basal body rod protein CDIF29627_RS01875 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29627_RS01880 PF00460 Flagella basal body rod protein CDIF29627_RS01880 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29627_RS01890 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDIF29627_RS01890 PF04509 CheC-like family CDIF29627_RS01900 PF00183 Hsp90 protein CDIF29627_RS01905 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS01910 PF04055 Radical SAM superfamily CDIF29627_RS01915 PF12833 Helix-turn-helix domain CDIF29627_RS01925 PF01638 HxlR-like helix-turn-helix CDIF29627_RS01945 PF03610 PTS system fructose IIA component CDIF29627_RS01945 PF00874 PRD domain CDIF29627_RS01945 PF00158 Sigma-54 interaction domain CDIF29627_RS01950 PF00874 PRD domain CDIF29627_RS01950 PF03610 PTS system fructose IIA component CDIF29627_RS01950 PF00158 Sigma-54 interaction domain CDIF29627_RS01965 PF03830 PTS system sorbose subfamily IIB component CDIF29627_RS01970 PF03609 PTS system sorbose-specific iic component CDIF29627_RS01975 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29627_RS01985 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS01995 PF01381 Helix-turn-helix CDIF29627_RS02000 PF13396 Phospholipase_D-nuclease N-terminal CDIF29627_RS02005 PF00005 ABC transporter CDIF29627_RS02005 PF13732 Domain of unknown function (DUF4162) CDIF29627_RS02025 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29627_RS02025 PF04055 Radical SAM superfamily CDIF29627_RS02030 PF00356 Bacterial regulatory proteins, lacI family CDIF29627_RS02035 PF00294 pfkB family carbohydrate kinase CDIF29627_RS02040 PF13407 Periplasmic binding protein domain CDIF29627_RS02045 PF00005 ABC transporter CDIF29627_RS02050 PF02653 Branched-chain amino acid transport system / permease component CDIF29627_RS02055 PF07687 Peptidase dimerisation domain CDIF29627_RS02055 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS02065 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS02105 PF01022 Bacterial regulatory protein, arsR family CDIF29627_RS02110 PF00403 Heavy-metal-associated domain CDIF29627_RS02130 PF09335 SNARE associated Golgi protein CDIF29627_RS02150 PF00005 ABC transporter CDIF29627_RS02160 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS02160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS02165 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS02165 PF00072 Response regulator receiver domain CDIF29627_RS02185 PF01891 Cobalt uptake substrate-specific transmembrane region CDIF29627_RS02190 PF02553 Cobalt transport protein component CbiN CDIF29627_RS02195 PF02361 Cobalt transport protein CDIF29627_RS02200 PF00005 ABC transporter CDIF29627_RS02205 PF00580 UvrD/REP helicase N-terminal domain CDIF29627_RS02205 PF13361 UvrD-like helicase C-terminal domain CDIF29627_RS02220 PF12323 Helix-turn-helix domain CDIF29627_RS02220 PF01385 Probable transposase CDIF29627_RS02220 PF07282 Putative transposase DNA-binding domain CDIF29627_RS02235 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDIF29627_RS02245 PF07085 DRTGG domain CDIF29627_RS02245 PF02833 DHHA2 domain CDIF29627_RS02245 PF01368 DHH family CDIF29627_RS02245 PF00571 CBS domain CDIF29627_RS02250 PF00171 Aldehyde dehydrogenase family CDIF29627_RS02250 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS02260 PF00005 ABC transporter CDIF29627_RS02270 PF00989 PAS fold CDIF29627_RS02270 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CDIF29627_RS02270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS02270 PF17203 Single cache domain 3 CDIF29627_RS02275 PF00072 Response regulator receiver domain CDIF29627_RS02275 PF04397 LytTr DNA-binding domain CDIF29627_RS02300 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS02300 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDIF29627_RS02305 PF04607 Region found in RelA / SpoT proteins CDIF29627_RS02350 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS02350 PF00367 phosphotransferase system, EIIB CDIF29627_RS02350 PF02378 Phosphotransferase system, EIIC CDIF29627_RS02355 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS02360 PF00874 PRD domain CDIF29627_RS02360 PF03123 CAT RNA binding domain CDIF29627_RS02365 PF13537 Glutamine amidotransferase domain CDIF29627_RS02365 PF00733 Asparagine synthase CDIF29627_RS02380 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDIF29627_RS02380 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDIF29627_RS02385 PF02515 CoA-transferase family III CDIF29627_RS02390 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29627_RS02395 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29627_RS02400 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29627_RS02405 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29627_RS02405 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29627_RS02405 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29627_RS02410 PF01012 Electron transfer flavoprotein domain CDIF29627_RS02415 PF01012 Electron transfer flavoprotein domain CDIF29627_RS02415 PF13237 4Fe-4S dicluster domain CDIF29627_RS02415 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29627_RS02420 PF00158 Sigma-54 interaction domain CDIF29627_RS02420 PF13188 PAS domain CDIF29627_RS02420 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS02425 PF01116 Fructose-bisphosphate aldolase class-II CDIF29627_RS02450 PF07282 Putative transposase DNA-binding domain CDIF29627_RS02450 PF01385 Probable transposase CDIF29627_RS02450 PF12323 Helix-turn-helix domain CDIF29627_RS02460 PF05958 tRNA (Uracil-5-)-methyltransferase CDIF29627_RS02525 PF01476 LysM domain CDIF29627_RS02525 PF00877 NlpC/P60 family CDIF29627_RS02525 PF08239 Bacterial SH3 domain CDIF29627_RS02540 PF01131 DNA topoisomerase CDIF29627_RS02540 PF01751 Toprim domain CDIF29627_RS02585 PF03432 Relaxase/Mobilisation nuclease domain CDIF29627_RS02595 PF08534 Redoxin CDIF29627_RS02605 PF04205 FMN-binding domain CDIF29627_RS02605 PF12801 4Fe-4S binding domain CDIF29627_RS02615 PF00005 ABC transporter CDIF29627_RS02625 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS02625 PF00072 Response regulator receiver domain CDIF29627_RS02630 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS02630 PF00672 HAMP domain CDIF29627_RS02630 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS02655 PF02796 Helix-turn-helix domain of resolvase CDIF29627_RS02655 PF00239 Resolvase, N terminal domain CDIF29627_RS02660 PF13408 Recombinase zinc beta ribbon domain CDIF29627_RS02660 PF07508 Recombinase CDIF29627_RS02660 PF00239 Resolvase, N terminal domain CDIF29627_RS02675 PF13302 Acetyltransferase (GNAT) domain CDIF29627_RS02735 PF00158 Sigma-54 interaction domain CDIF29627_RS02735 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS02735 PF13426 PAS domain CDIF29627_RS02750 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS02755 PF16552 D-ornithine 4,5-aminomutase alpha-subunit CDIF29627_RS02760 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CDIF29627_RS02760 PF02310 B12 binding domain CDIF29627_RS02760 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CDIF29627_RS02765 PF13941 MutL protein CDIF29627_RS02770 PF01168 Alanine racemase, N-terminal domain CDIF29627_RS02775 PF03553 Na+/H+ antiporter family CDIF29627_RS02790 PF12833 Helix-turn-helix domain CDIF29627_RS02795 PF13538 UvrD-like helicase C-terminal domain CDIF29627_RS02800 PF17760 UvrA interaction domain CDIF29627_RS02800 PF00005 ABC transporter CDIF29627_RS02800 PF17755 UvrA DNA-binding domain CDIF29627_RS02810 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS02815 PF00005 ABC transporter CDIF29627_RS02825 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS02825 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS02825 PF00989 PAS fold CDIF29627_RS02830 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS02830 PF00072 Response regulator receiver domain CDIF29627_RS02835 PF17754 MftR C-terminal domain CDIF29627_RS02835 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS02840 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS02850 PF00005 ABC transporter CDIF29627_RS02865 PF01380 SIS domain CDIF29627_RS02865 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS02880 PF00128 Alpha amylase, catalytic domain CDIF29627_RS02885 PF00367 phosphotransferase system, EIIB CDIF29627_RS02885 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS02885 PF02378 Phosphotransferase system, EIIC CDIF29627_RS02890 PF00302 Chloramphenicol acetyltransferase CDIF29627_RS02900 PF05223 NTF2-like N-terminal transpeptidase domain CDIF29627_RS02900 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS02900 PF03717 Penicillin-binding Protein dimerisation domain CDIF29627_RS02905 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS02905 PF05569 BlaR1 peptidase M56 CDIF29627_RS02910 PF03965 Penicillinase repressor CDIF29627_RS02915 PF03358 NADPH-dependent FMN reductase CDIF29627_RS02945 PF00005 ABC transporter CDIF29627_RS02960 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS02960 PF00072 Response regulator receiver domain CDIF29627_RS02965 PF00672 HAMP domain CDIF29627_RS02965 PF13426 PAS domain CDIF29627_RS02965 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS02965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS02975 PF00005 ABC transporter CDIF29627_RS02980 PF01066 CDP-alcohol phosphatidyltransferase CDIF29627_RS02985 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS02985 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS02990 PF00072 Response regulator receiver domain CDIF29627_RS02990 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS03030 PF14492 Elongation Factor G, domain II CDIF29627_RS03030 PF03764 Elongation factor G, domain IV CDIF29627_RS03030 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS03030 PF00679 Elongation factor G C-terminus CDIF29627_RS03055 PF09035 Excisionase from transposon Tn916 CDIF29627_RS03060 PF00589 Phage integrase family CDIF29627_RS03060 PF02920 DNA binding domain of tn916 integrase CDIF29627_RS03070 PF00795 Carbon-nitrogen hydrolase CDIF29627_RS03075 PF00893 Small Multidrug Resistance protein CDIF29627_RS03080 PF01259 SAICAR synthetase CDIF29627_RS03085 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29627_RS03085 PF00107 Zinc-binding dehydrogenase CDIF29627_RS03095 PF03830 PTS system sorbose subfamily IIB component CDIF29627_RS03105 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29627_RS03125 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29627_RS03125 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29627_RS03130 PF03610 PTS system fructose IIA component CDIF29627_RS03130 PF00874 PRD domain CDIF29627_RS03130 PF00158 Sigma-54 interaction domain CDIF29627_RS03150 PF02702 Osmosensitive K+ channel His kinase sensor domain CDIF29627_RS03150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS03150 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS03150 PF13493 Domain of unknown function (DUF4118) CDIF29627_RS03155 PF00072 Response regulator receiver domain CDIF29627_RS03155 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS03165 PF00563 EAL domain CDIF29627_RS03165 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS03165 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS03175 PF07687 Peptidase dimerisation domain CDIF29627_RS03175 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS03180 PF03806 AbgT putative transporter family CDIF29627_RS03205 PF13280 WYL domain CDIF29627_RS03205 PF08279 HTH domain CDIF29627_RS03220 PF00072 Response regulator receiver domain CDIF29627_RS03225 PF04509 CheC-like family CDIF29627_RS03230 PF03975 CheD chemotactic sensory transduction CDIF29627_RS03235 PF01584 CheW-like domain CDIF29627_RS03240 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS03240 PF00072 Response regulator receiver domain CDIF29627_RS03245 PF02203 Tar ligand binding domain homologue CDIF29627_RS03245 PF00672 HAMP domain CDIF29627_RS03245 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDIF29627_RS03250 PF01584 CheW-like domain CDIF29627_RS03250 PF07194 P2 response regulator binding domain CDIF29627_RS03250 PF01627 Hpt domain CDIF29627_RS03250 PF02895 Signal transducing histidine kinase, homodimeric domain CDIF29627_RS03250 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS03255 PF01584 CheW-like domain CDIF29627_RS03260 PF03705 CheR methyltransferase, all-alpha domain CDIF29627_RS03260 PF01739 CheR methyltransferase, SAM binding domain CDIF29627_RS03265 PF00072 Response regulator receiver domain CDIF29627_RS03265 PF01339 CheB methylesterase CDIF29627_RS03275 PF02423 Ornithine cyclodeaminase/mu-crystallin family CDIF29627_RS03290 PF03965 Penicillinase repressor CDIF29627_RS03295 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS03295 PF05569 BlaR1 peptidase M56 CDIF29627_RS03315 PF13367 PrsW family intramembrane metalloprotease CDIF29627_RS03320 PF17126 RsmF rRNA methyltransferase first C-terminal domain CDIF29627_RS03320 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDIF29627_RS03320 PF01189 16S rRNA methyltransferase RsmB/F CDIF29627_RS03325 PF10502 Signal peptidase, peptidase S26 CDIF29627_RS03330 PF10502 Signal peptidase, peptidase S26 CDIF29627_RS03340 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29627_RS03340 PF03129 Anticodon binding domain CDIF29627_RS03340 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29627_RS03350 PF04960 Glutaminase CDIF29627_RS03360 PF01261 Xylose isomerase-like TIM barrel CDIF29627_RS03380 PF08331 Domain of unknown function (DUF1730) CDIF29627_RS03385 PF13654 AAA domain CDIF29627_RS03385 PF05362 Lon protease (S16) C-terminal proteolytic domain CDIF29627_RS03390 PF00633 Helix-hairpin-helix motif CDIF29627_RS03390 PF00730 HhH-GPD superfamily base excision DNA repair protein CDIF29627_RS03390 PF10576 Iron-sulfur binding domain of endonuclease III CDIF29627_RS03395 PF00588 SpoU rRNA Methylase family CDIF29627_RS03400 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29627_RS03405 PF02608 ABC transporter substrate-binding protein PnrA-like CDIF29627_RS03410 PF02608 ABC transporter substrate-binding protein PnrA-like CDIF29627_RS03425 PF04286 Protein of unknown function (DUF445) CDIF29627_RS03425 PF04286 Protein of unknown function (DUF445) CDIF29627_RS03430 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29627_RS03430 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29627_RS03430 PF02824 TGS domain CDIF29627_RS03430 PF03129 Anticodon binding domain CDIF29627_RS03450 PF03551 Transcriptional regulator PadR-like family CDIF29627_RS03480 PF00171 Aldehyde dehydrogenase family CDIF29627_RS03485 PF17932 Tetracyclin repressor-like, C-terminal domain CDIF29627_RS03485 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS03490 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDIF29627_RS03490 PF00391 PEP-utilising enzyme, mobile domain CDIF29627_RS03500 PF00563 EAL domain CDIF29627_RS03500 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS03500 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS03505 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS03505 PF17151 Periplasmic sensor domain CDIF29627_RS03510 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS03510 PF17151 Periplasmic sensor domain CDIF29627_RS03540 PF01580 FtsK/SpoIIIE family CDIF29627_RS03540 PF09397 Ftsk gamma domain CDIF29627_RS03540 PF17854 FtsK alpha domain CDIF29627_RS03585 PF01507 Phosphoadenosine phosphosulfate reductase family CDIF29627_RS03585 PF11922 Domain of unknown function (DUF3440) CDIF29627_RS03590 PF02195 ParB-like nuclease domain CDIF29627_RS03605 PF05067 Manganese containing catalase CDIF29627_RS03620 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDIF29627_RS03620 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDIF29627_RS03635 PF04229 GrpB protein CDIF29627_RS03640 PF00654 Voltage gated chloride channel CDIF29627_RS03660 PF04397 LytTr DNA-binding domain CDIF29627_RS03660 PF00072 Response regulator receiver domain CDIF29627_RS03665 PF02687 FtsX-like permease family CDIF29627_RS03670 PF00005 ABC transporter CDIF29627_RS03690 PF13411 MerR HTH family regulatory protein CDIF29627_RS03690 PF06445 GyrI-like small molecule binding domain CDIF29627_RS03740 PF03796 DnaB-like helicase C terminal domain CDIF29627_RS03740 PF00772 DnaB-like helicase N terminal domain CDIF29627_RS03745 PF07497 Rho termination factor, RNA-binding domain CDIF29627_RS03745 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS03760 PF00027 Cyclic nucleotide-binding domain CDIF29627_RS03760 PF13545 Crp-like helix-turn-helix domain CDIF29627_RS03765 PF01554 MatE CDIF29627_RS03775 PF08713 DNA alkylation repair enzyme CDIF29627_RS03785 PF12697 Alpha/beta hydrolase family CDIF29627_RS03830 PF00072 Response regulator receiver domain CDIF29627_RS03830 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS03835 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS03835 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS03840 PF00005 ABC transporter CDIF29627_RS03850 PF02661 Fic/DOC family CDIF29627_RS03850 PF12728 Helix-turn-helix domain CDIF29627_RS03855 PF07729 FCD domain CDIF29627_RS03855 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS03860 PF00326 Prolyl oligopeptidase family CDIF29627_RS03860 PF07676 WD40-like Beta Propeller Repeat CDIF29627_RS03865 PF00326 Prolyl oligopeptidase family CDIF29627_RS03865 PF07676 WD40-like Beta Propeller Repeat CDIF29627_RS03880 PF01380 SIS domain CDIF29627_RS03880 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS03885 PF02378 Phosphotransferase system, EIIC CDIF29627_RS03890 PF09261 Alpha mannosidase middle domain CDIF29627_RS03890 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29627_RS03890 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29627_RS03895 PF00128 Alpha amylase, catalytic domain CDIF29627_RS03900 PF04397 LytTr DNA-binding domain CDIF29627_RS03900 PF00072 Response regulator receiver domain CDIF29627_RS03925 PF04055 Radical SAM superfamily CDIF29627_RS03925 PF13186 Iron-sulfur cluster-binding domain CDIF29627_RS03930 PF06463 Molybdenum Cofactor Synthesis C CDIF29627_RS03930 PF04055 Radical SAM superfamily CDIF29627_RS03935 PF04055 Radical SAM superfamily CDIF29627_RS03935 PF06463 Molybdenum Cofactor Synthesis C CDIF29627_RS03945 PF00005 ABC transporter CDIF29627_RS03950 PF00664 ABC transporter transmembrane region CDIF29627_RS03950 PF00005 ABC transporter CDIF29627_RS03955 PF13276 HTH-like domain CDIF29627_RS03955 PF00665 Integrase core domain CDIF29627_RS03955 PF13333 Integrase core domain CDIF29627_RS03970 PF00654 Voltage gated chloride channel CDIF29627_RS03990 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS03990 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS03990 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS03990 PF11713 Peptidase C80 family CDIF29627_RS03990 PF01473 Putative cell wall binding repeat CDIF29627_RS03995 PF05105 Bacteriophage holin family CDIF29627_RS04010 PF01473 Putative cell wall binding repeat CDIF29627_RS04010 PF11713 Peptidase C80 family CDIF29627_RS04010 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS04010 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS04010 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS04015 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS04015 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS04015 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS04015 PF11713 Peptidase C80 family CDIF29627_RS04015 PF01473 Putative cell wall binding repeat CDIF29627_RS04020 PF11713 Peptidase C80 family CDIF29627_RS04020 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS04020 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS04020 PF01473 Putative cell wall binding repeat CDIF29627_RS04020 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS04025 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS04025 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS04025 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS04025 PF01473 Putative cell wall binding repeat CDIF29627_RS04025 PF11713 Peptidase C80 family CDIF29627_RS04030 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS04030 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS04030 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS04030 PF11713 Peptidase C80 family CDIF29627_RS04030 PF12918 TcdB toxin N-terminal helical domain CDIF29627_RS04030 PF12920 TcdA/TcdB pore forming domain CDIF29627_RS04030 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CDIF29627_RS04030 PF11713 Peptidase C80 family CDIF29627_RS04030 PF01473 Putative cell wall binding repeat CDIF29627_RS04030 PF01473 Putative cell wall binding repeat CDIF29627_RS04065 PF00005 ABC transporter CDIF29627_RS04070 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS04070 PF00072 Response regulator receiver domain CDIF29627_RS04075 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS04075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS04115 PF08281 Sigma-70, region 4 CDIF29627_RS04115 PF04542 Sigma-70 region 2 CDIF29627_RS04130 PF07969 Amidohydrolase family CDIF29627_RS04150 PF12323 Helix-turn-helix domain CDIF29627_RS04150 PF07282 Putative transposase DNA-binding domain CDIF29627_RS04150 PF01385 Probable transposase CDIF29627_RS04165 PF00083 Sugar (and other) transporter CDIF29627_RS04170 PF00474 Sodium:solute symporter family CDIF29627_RS04175 PF00356 Bacterial regulatory proteins, lacI family CDIF29627_RS04180 PF01434 Peptidase family M41 CDIF29627_RS04180 PF17862 AAA+ lid domain CDIF29627_RS04180 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS04185 PF05198 Translation initiation factor IF-3, N-terminal domain CDIF29627_RS04185 PF00707 Translation initiation factor IF-3, C-terminal domain CDIF29627_RS04190 PF01632 Ribosomal protein L35 CDIF29627_RS04195 PF00453 Ribosomal protein L20 CDIF29627_RS04240 PF09278 MerR, DNA binding CDIF29627_RS04240 PF00376 MerR family regulatory protein CDIF29627_RS04260 PF02386 Cation transport protein CDIF29627_RS04265 PF02080 TrkA-C domain CDIF29627_RS04265 PF02254 TrkA-N domain CDIF29627_RS04270 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDIF29627_RS04270 PF00588 SpoU rRNA Methylase family CDIF29627_RS04275 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDIF29627_RS04275 PF01409 tRNA synthetases class II core domain (F) CDIF29627_RS04280 PF03147 Ferredoxin-fold anticodon binding domain CDIF29627_RS04280 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDIF29627_RS04280 PF03484 tRNA synthetase B5 domain CDIF29627_RS04280 PF01588 Putative tRNA binding domain CDIF29627_RS04280 PF03483 B3/4 domain CDIF29627_RS04295 PF01136 Peptidase family U32 CDIF29627_RS04295 PF12392 Collagenase CDIF29627_RS04305 PF00293 NUDIX domain CDIF29627_RS04315 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS04315 PF05230 MASE2 domain CDIF29627_RS04320 PF07687 Peptidase dimerisation domain CDIF29627_RS04320 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS04325 PF00488 MutS domain V CDIF29627_RS04325 PF01713 Smr domain CDIF29627_RS04330 PF04463 Protein of unknown function (DUF523) CDIF29627_RS04335 PF03485 Arginyl tRNA synthetase N terminal domain CDIF29627_RS04335 PF05746 DALR anticodon binding domain CDIF29627_RS04335 PF00750 tRNA synthetases class I (R) CDIF29627_RS04350 PF02310 B12 binding domain CDIF29627_RS04350 PF04055 Radical SAM superfamily CDIF29627_RS04360 PF03466 LysR substrate binding domain CDIF29627_RS04360 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS04370 PF01515 Phosphate acetyl/butaryl transferase CDIF29627_RS04375 PF03063 Prismane/CO dehydrogenase family CDIF29627_RS04380 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29627_RS04385 PF01268 Formate--tetrahydrofolate ligase CDIF29627_RS04390 PF04961 Formiminotransferase-cyclodeaminase CDIF29627_RS04395 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDIF29627_RS04395 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDIF29627_RS04405 PF02219 Methylenetetrahydrofolate reductase CDIF29627_RS04405 PF02574 Homocysteine S-methyltransferase CDIF29627_RS04410 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS04410 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29627_RS04420 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CDIF29627_RS04425 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CDIF29627_RS04425 PF04060 Putative Fe-S cluster CDIF29627_RS04430 PF00809 Pterin binding enzyme CDIF29627_RS04435 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CDIF29627_RS04435 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CDIF29627_RS04440 PF01597 Glycine cleavage H-protein CDIF29627_RS04455 PF04055 Radical SAM superfamily CDIF29627_RS04455 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29627_RS04460 PF03099 Biotin/lipoate A/B protein ligase family CDIF29627_RS04480 PF02811 PHP domain CDIF29627_RS04495 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS04495 PF00266 Aminotransferase class-V CDIF29627_RS04500 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29627_RS04500 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29627_RS04505 PF04346 Ethanolamine utilisation protein, EutH CDIF29627_RS04510 PF00455 DeoR C terminal sensor domain CDIF29627_RS04510 PF08220 DeoR-like helix-turn-helix domain CDIF29627_RS04520 PF01618 MotA/TolQ/ExbB proton channel family CDIF29627_RS04525 PF00691 OmpA family CDIF29627_RS04525 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDIF29627_RS04540 PF00563 EAL domain CDIF29627_RS04540 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS04540 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS04545 PF13361 UvrD-like helicase C-terminal domain CDIF29627_RS04545 PF00580 UvrD/REP helicase N-terminal domain CDIF29627_RS04550 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29627_RS04555 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS04560 PF00005 ABC transporter CDIF29627_RS04565 PF00266 Aminotransferase class-V CDIF29627_RS04570 PF02926 THUMP domain CDIF29627_RS04570 PF02568 Thiamine biosynthesis protein (ThiI) CDIF29627_RS04575 PF00114 Pilin (bacterial filament) CDIF29627_RS04575 PF07963 Prokaryotic N-terminal methylation motif CDIF29627_RS04580 PF00881 Nitroreductase family CDIF29627_RS04585 PF00563 EAL domain CDIF29627_RS04585 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS04585 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS04590 PF04055 Radical SAM superfamily CDIF29627_RS04595 PF02901 Pyruvate formate lyase-like CDIF29627_RS04595 PF01228 Glycine radical CDIF29627_RS04600 PF01699 Sodium/calcium exchanger protein CDIF29627_RS04605 PF00271 Helicase conserved C-terminal domain CDIF29627_RS04605 PF00270 DEAD/DEAH box helicase CDIF29627_RS04610 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDIF29627_RS04610 PF01568 Molydopterin dinucleotide binding domain CDIF29627_RS04610 PF00384 Molybdopterin oxidoreductase CDIF29627_RS04615 PF01740 STAS domain CDIF29627_RS04620 PF13581 Histidine kinase-like ATPase domain CDIF29627_RS04625 PF04545 Sigma-70, region 4 CDIF29627_RS04625 PF04542 Sigma-70 region 2 CDIF29627_RS04625 PF04539 Sigma-70 region 3 CDIF29627_RS04630 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CDIF29627_RS04635 PF07451 Stage V sporulation protein AD (SpoVAD) CDIF29627_RS04645 PF00356 Bacterial regulatory proteins, lacI family CDIF29627_RS04660 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS04670 PF01209 ubiE/COQ5 methyltransferase family CDIF29627_RS04685 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29627_RS04690 PF00912 Transglycosylase CDIF29627_RS04690 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS04700 PF17820 PDZ domain CDIF29627_RS04700 PF05580 SpoIVB peptidase S55 CDIF29627_RS04705 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS04705 PF08239 Bacterial SH3 domain CDIF29627_RS04710 PF00005 ABC transporter CDIF29627_RS04710 PF12848 ABC transporter CDIF29627_RS04725 PF16360 GTP-binding GTPase Middle Region CDIF29627_RS04725 PF13167 GTP-binding GTPase N-terminal CDIF29627_RS04725 PF01926 50S ribosome-binding GTPase CDIF29627_RS04740 PF09186 Domain of unknown function (DUF1949) CDIF29627_RS04740 PF01205 Uncharacterized protein family UPF0029 CDIF29627_RS04750 PF01925 Sulfite exporter TauE/SafE CDIF29627_RS04755 PF02540 NAD synthase CDIF29627_RS04760 PF01709 Transcriptional regulator CDIF29627_RS04765 PF00378 Enoyl-CoA hydratase/isomerase CDIF29627_RS04775 PF02515 CoA-transferase family III CDIF29627_RS04780 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29627_RS04780 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29627_RS04780 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29627_RS04785 PF01012 Electron transfer flavoprotein domain CDIF29627_RS04790 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29627_RS04790 PF01012 Electron transfer flavoprotein domain CDIF29627_RS04790 PF13237 4Fe-4S dicluster domain CDIF29627_RS04795 PF00158 Sigma-54 interaction domain CDIF29627_RS04795 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS04795 PF13426 PAS domain CDIF29627_RS04815 PF12724 Flavodoxin domain CDIF29627_RS04820 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS04820 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS04820 PF00563 EAL domain CDIF29627_RS04835 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS04835 PF07729 FCD domain CDIF29627_RS04840 PF07690 Major Facilitator Superfamily CDIF29627_RS04845 PF02378 Phosphotransferase system, EIIC CDIF29627_RS04845 PF00367 phosphotransferase system, EIIB CDIF29627_RS04845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS04850 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS04855 PF03123 CAT RNA binding domain CDIF29627_RS04855 PF00874 PRD domain CDIF29627_RS04860 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS04860 PF00072 Response regulator receiver domain CDIF29627_RS04865 PF00989 PAS fold CDIF29627_RS04865 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS04865 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS04865 PF16736 Single Cache-like CDIF29627_RS04870 PF00005 ABC transporter CDIF29627_RS04885 PF02915 Rubrerythrin CDIF29627_RS04895 PF01880 Desulfoferrodoxin CDIF29627_RS04900 PF01645 Conserved region in glutamate synthase CDIF29627_RS04915 PF00271 Helicase conserved C-terminal domain CDIF29627_RS04915 PF00270 DEAD/DEAH box helicase CDIF29627_RS04920 PF00682 HMGL-like CDIF29627_RS04925 PF00330 Aconitase family (aconitate hydratase) CDIF29627_RS04930 PF00180 Isocitrate/isopropylmalate dehydrogenase CDIF29627_RS04930 PF18324 Hypothetical protein TT1725 CDIF29627_RS04935 PF01047 MarR family CDIF29627_RS04960 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDIF29627_RS04965 PF02142 MGS-like domain CDIF29627_RS04965 PF01808 AICARFT/IMPCHase bienzyme CDIF29627_RS04975 PF13439 Glycosyltransferase Family 4 CDIF29627_RS04975 PF00534 Glycosyl transferases group 1 CDIF29627_RS04990 PF01381 Helix-turn-helix CDIF29627_RS05020 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS05025 PF01106 NifU-like domain CDIF29627_RS05040 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS05045 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS05045 PF12911 N-terminal TM domain of oligopeptide transport permease C CDIF29627_RS05050 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29627_RS05055 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29627_RS05055 PF00005 ABC transporter CDIF29627_RS05060 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29627_RS05060 PF00005 ABC transporter CDIF29627_RS05065 PF00158 Sigma-54 interaction domain CDIF29627_RS05065 PF00874 PRD domain CDIF29627_RS05065 PF03610 PTS system fructose IIA component CDIF29627_RS05075 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS05080 PF02378 Phosphotransferase system, EIIC CDIF29627_RS05090 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29627_RS05090 PF02056 Family 4 glycosyl hydrolase CDIF29627_RS05095 PF01661 Macro domain CDIF29627_RS05100 PF12146 Serine aminopeptidase, S33 CDIF29627_RS05110 PF12727 PBP superfamily domain CDIF29627_RS05110 PF12728 Helix-turn-helix domain CDIF29627_RS05120 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS05125 PF12857 TOBE-like domain CDIF29627_RS05125 PF17850 CysA C-terminal regulatory domain CDIF29627_RS05125 PF00005 ABC transporter CDIF29627_RS05130 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29627_RS05130 PF12464 Maltose acetyltransferase CDIF29627_RS05140 PF09383 NIL domain CDIF29627_RS05140 PF00005 ABC transporter CDIF29627_RS05145 PF02653 Branched-chain amino acid transport system / permease component CDIF29627_RS05150 PF04392 ABC transporter substrate binding protein CDIF29627_RS05155 PF00005 ABC transporter CDIF29627_RS05160 PF02653 Branched-chain amino acid transport system / permease component CDIF29627_RS05165 PF03853 YjeF-related protein N-terminus CDIF29627_RS05165 PF01256 Carbohydrate kinase CDIF29627_RS05175 PF01145 SPFH domain / Band 7 family CDIF29627_RS05180 PF00483 Nucleotidyl transferase CDIF29627_RS05185 PF00483 Nucleotidyl transferase CDIF29627_RS05190 PF00534 Glycosyl transferases group 1 CDIF29627_RS05190 PF08323 Starch synthase catalytic domain CDIF29627_RS05195 PF00343 Carbohydrate phosphorylase CDIF29627_RS05200 PF00395 S-layer homology domain CDIF29627_RS05200 PF00128 Alpha amylase, catalytic domain CDIF29627_RS05200 PF02903 Alpha amylase, N-terminal ig-like domain CDIF29627_RS05205 PF07729 FCD domain CDIF29627_RS05205 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS05215 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDIF29627_RS05215 PF01276 Orn/Lys/Arg decarboxylase, major domain CDIF29627_RS05220 PF02675 S-adenosylmethionine decarboxylase CDIF29627_RS05225 PF17284 Spermidine synthase tetramerisation domain CDIF29627_RS05230 PF00491 Arginase family CDIF29627_RS05235 PF00313 'Cold-shock' DNA-binding domain CDIF29627_RS05245 PF13187 4Fe-4S dicluster domain CDIF29627_RS05245 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29627_RS05265 PF08903 Domain of unknown function (DUF1846) CDIF29627_RS05270 PF11798 IMS family HHH motif CDIF29627_RS05270 PF11799 impB/mucB/samB family C-terminal domain CDIF29627_RS05270 PF00817 impB/mucB/samB family CDIF29627_RS05275 PF00005 ABC transporter CDIF29627_RS05275 PF00571 CBS domain CDIF29627_RS05280 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS05285 PF01545 Cation efflux family CDIF29627_RS05285 PF16916 Dimerisation domain of Zinc Transporter CDIF29627_RS05315 PF01554 MatE CDIF29627_RS05320 PF02401 LytB protein CDIF29627_RS05320 PF00575 S1 RNA binding domain CDIF29627_RS05335 PF00682 HMGL-like CDIF29627_RS05335 PF08502 LeuA allosteric (dimerisation) domain CDIF29627_RS05340 PF00330 Aconitase family (aconitate hydratase) CDIF29627_RS05345 PF00694 Aconitase C-terminal domain CDIF29627_RS05350 PF00180 Isocitrate/isopropylmalate dehydrogenase CDIF29627_RS05360 PF00266 Aminotransferase class-V CDIF29627_RS05365 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDIF29627_RS05365 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDIF29627_RS05380 PF08448 PAS fold CDIF29627_RS05380 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS05380 PF13426 PAS domain CDIF29627_RS05380 PF00563 EAL domain CDIF29627_RS05380 PF05231 MASE1 CDIF29627_RS05380 PF08447 PAS fold CDIF29627_RS05385 PF04055 Radical SAM superfamily CDIF29627_RS05385 PF11842 Domain of unknown function (DUF3362) CDIF29627_RS05385 PF08497 Radical SAM N-terminal CDIF29627_RS05400 PF00005 ABC transporter CDIF29627_RS05405 PF04073 Aminoacyl-tRNA editing domain CDIF29627_RS05410 PF05681 Fumarate hydratase (Fumerase) CDIF29627_RS05420 PF00390 Malic enzyme, N-terminal domain CDIF29627_RS05420 PF03949 Malic enzyme, NAD binding domain CDIF29627_RS05430 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS05430 PF00072 Response regulator receiver domain CDIF29627_RS05435 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS05435 PF18698 Histidine kinase sensor domain CDIF29627_RS05435 PF00672 HAMP domain CDIF29627_RS05435 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS05435 PF00989 PAS fold CDIF29627_RS05440 PF00005 ABC transporter CDIF29627_RS05440 PF02687 FtsX-like permease family CDIF29627_RS05440 PF12704 MacB-like periplasmic core domain CDIF29627_RS05455 PF07702 UTRA domain CDIF29627_RS05455 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS05460 PF01979 Amidohydrolase family CDIF29627_RS05465 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDIF29627_RS05475 PF00072 Response regulator receiver domain CDIF29627_RS05475 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS05480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS05480 PF00989 PAS fold CDIF29627_RS05480 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS05480 PF16736 Single Cache-like CDIF29627_RS05485 PF13426 PAS domain CDIF29627_RS05485 PF00563 EAL domain CDIF29627_RS05485 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS05495 PF06445 GyrI-like small molecule binding domain CDIF29627_RS05495 PF13411 MerR HTH family regulatory protein CDIF29627_RS05500 PF00664 ABC transporter transmembrane region CDIF29627_RS05500 PF00005 ABC transporter CDIF29627_RS05505 PF00005 ABC transporter CDIF29627_RS05505 PF00664 ABC transporter transmembrane region CDIF29627_RS05535 PF00005 ABC transporter CDIF29627_RS05535 PF08402 TOBE domain CDIF29627_RS05540 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS05545 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS05550 PF13416 Bacterial extracellular solute-binding protein CDIF29627_RS05560 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CDIF29627_RS05570 PF03170 Bacterial cellulose synthase subunit CDIF29627_RS05580 PF02350 UDP-N-acetylglucosamine 2-epimerase CDIF29627_RS05585 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29627_RS05585 PF01476 LysM domain CDIF29627_RS05610 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS05610 PF08239 Bacterial SH3 domain CDIF29627_RS05615 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS05615 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS05625 PF00580 UvrD/REP helicase N-terminal domain CDIF29627_RS05625 PF13361 UvrD-like helicase C-terminal domain CDIF29627_RS05635 PF12705 PD-(D/E)XK nuclease superfamily CDIF29627_RS05640 PF13361 UvrD-like helicase C-terminal domain CDIF29627_RS05640 PF00580 UvrD/REP helicase N-terminal domain CDIF29627_RS05640 PF12705 PD-(D/E)XK nuclease superfamily CDIF29627_RS05645 PF12320 Type 5 capsule protein repressor C-terminal domain CDIF29627_RS05645 PF00149 Calcineurin-like phosphoesterase CDIF29627_RS05650 PF13175 AAA ATPase domain CDIF29627_RS05655 PF01595 Cyclin M transmembrane N-terminal domain CDIF29627_RS05655 PF00571 CBS domain CDIF29627_RS05655 PF03471 Transporter associated domain CDIF29627_RS05660 PF01594 AI-2E family transporter CDIF29627_RS05665 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS05665 PF07687 Peptidase dimerisation domain CDIF29627_RS05675 PF12850 Calcineurin-like phosphoesterase superfamily domain CDIF29627_RS05680 PF01513 ATP-NAD kinase CDIF29627_RS05685 PF00005 ABC transporter CDIF29627_RS05705 PF04073 Aminoacyl-tRNA editing domain CDIF29627_RS05710 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29627_RS05710 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29627_RS05710 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29627_RS05715 PF01012 Electron transfer flavoprotein domain CDIF29627_RS05720 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29627_RS05720 PF01012 Electron transfer flavoprotein domain CDIF29627_RS05725 PF00378 Enoyl-CoA hydratase/isomerase CDIF29627_RS05730 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDIF29627_RS05730 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDIF29627_RS05735 PF00108 Thiolase, N-terminal domain CDIF29627_RS05735 PF02803 Thiolase, C-terminal domain CDIF29627_RS05740 PF00849 RNA pseudouridylate synthase CDIF29627_RS05740 PF01479 S4 domain CDIF29627_RS05750 PF00550 Phosphopantetheine attachment site CDIF29627_RS05775 PF00356 Bacterial regulatory proteins, lacI family CDIF29627_RS05805 PF02811 PHP domain CDIF29627_RS05810 PF00155 Aminotransferase class I and II CDIF29627_RS05815 PF05979 Bacterial protein of unknown function (DUF896) CDIF29627_RS05820 PF02127 Aminopeptidase I zinc metalloprotease (M18) CDIF29627_RS05825 PF07702 UTRA domain CDIF29627_RS05825 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS05840 PF03830 PTS system sorbose subfamily IIB component CDIF29627_RS05845 PF03609 PTS system sorbose-specific iic component CDIF29627_RS05850 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29627_RS05855 PF03466 LysR substrate binding domain CDIF29627_RS05855 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS05865 PF00994 Probable molybdopterin binding domain CDIF29627_RS05865 PF03454 MoeA C-terminal region (domain IV) CDIF29627_RS05865 PF03453 MoeA N-terminal region (domain I and II) CDIF29627_RS05870 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDIF29627_RS05875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS05880 PF00005 ABC transporter CDIF29627_RS05880 PF00664 ABC transporter transmembrane region CDIF29627_RS05890 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS05890 PF07687 Peptidase dimerisation domain CDIF29627_RS05895 PF02535 ZIP Zinc transporter CDIF29627_RS05905 PF04397 LytTr DNA-binding domain CDIF29627_RS05905 PF00072 Response regulator receiver domain CDIF29627_RS05920 PF02901 Pyruvate formate lyase-like CDIF29627_RS05920 PF01228 Glycine radical CDIF29627_RS05925 PF13187 4Fe-4S dicluster domain CDIF29627_RS05925 PF04055 Radical SAM superfamily CDIF29627_RS05930 PF01381 Helix-turn-helix CDIF29627_RS05930 PF07883 Cupin domain CDIF29627_RS05955 PF12833 Helix-turn-helix domain CDIF29627_RS05955 PF06445 GyrI-like small molecule binding domain CDIF29627_RS05980 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29627_RS05995 PF00476 DNA polymerase family A CDIF29627_RS05995 PF01367 5'-3' exonuclease, C-terminal SAM fold CDIF29627_RS05995 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDIF29627_RS06000 PF01121 Dephospho-CoA kinase CDIF29627_RS06010 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29627_RS06025 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29627_RS06030 PF00877 NlpC/P60 family CDIF29627_RS06040 PF10531 SLBB domain CDIF29627_RS06040 PF13237 4Fe-4S dicluster domain CDIF29627_RS06040 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29627_RS06040 PF13375 RnfC Barrel sandwich hybrid domain CDIF29627_RS06045 PF03116 NQR2, RnfD, RnfE family CDIF29627_RS06050 PF04205 FMN-binding domain CDIF29627_RS06055 PF02508 Rnf-Nqr subunit, membrane protein CDIF29627_RS06060 PF02508 Rnf-Nqr subunit, membrane protein CDIF29627_RS06065 PF00037 4Fe-4S binding domain CDIF29627_RS06065 PF04060 Putative Fe-S cluster CDIF29627_RS06065 PF13187 4Fe-4S dicluster domain CDIF29627_RS06070 PF02545 Maf-like protein CDIF29627_RS06075 PF04002 RadC-like JAB domain CDIF29627_RS06095 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS06100 PF03775 Septum formation inhibitor MinC, C-terminal domain CDIF29627_RS06105 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29627_RS06110 PF03776 Septum formation topological specificity factor MinE CDIF29627_RS06115 PF01098 Cell cycle protein CDIF29627_RS06120 PF02142 MGS-like domain CDIF29627_RS06130 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS06130 PF00258 Flavodoxin CDIF29627_RS06145 PF10150 Ribonuclease E/G family CDIF29627_RS06145 PF00575 S1 RNA binding domain CDIF29627_RS06150 PF00829 Ribosomal prokaryotic L21 protein CDIF29627_RS06160 PF01016 Ribosomal L27 protein CDIF29627_RS06165 PF01926 50S ribosome-binding GTPase CDIF29627_RS06165 PF01018 GTP1/OBG CDIF29627_RS06165 PF09269 Domain of unknown function (DUF1967) CDIF29627_RS06175 PF01842 ACT domain CDIF29627_RS06175 PF00742 Homoserine dehydrogenase CDIF29627_RS06175 PF03447 Homoserine dehydrogenase, NAD binding domain CDIF29627_RS06185 PF07670 Nucleoside recognition CDIF29627_RS06190 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS06190 PF07729 FCD domain CDIF29627_RS06195 PF09861 Lactate racemase N-terminal domain CDIF29627_RS06200 PF01012 Electron transfer flavoprotein domain CDIF29627_RS06205 PF01012 Electron transfer flavoprotein domain CDIF29627_RS06205 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29627_RS06210 PF01565 FAD binding domain CDIF29627_RS06210 PF02913 FAD linked oxidases, C-terminal domain CDIF29627_RS06215 PF05636 HIGH Nucleotidyl Transferase CDIF29627_RS06220 PF00871 Acetokinase family CDIF29627_RS06230 PF01783 Ribosomal L32p protein family CDIF29627_RS06240 PF02504 Fatty acid synthesis protein CDIF29627_RS06245 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDIF29627_RS06245 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDIF29627_RS06250 PF03060 Nitronate monooxygenase CDIF29627_RS06255 PF00698 Acyl transferase domain CDIF29627_RS06265 PF00550 Phosphopantetheine attachment site CDIF29627_RS06270 PF02801 Beta-ketoacyl synthase, C-terminal domain CDIF29627_RS06270 PF00109 Beta-ketoacyl synthase, N-terminal domain CDIF29627_RS06275 PF07694 5TMR of 5TMR-LYT CDIF29627_RS06275 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS06280 PF00158 Sigma-54 interaction domain CDIF29627_RS06280 PF13426 PAS domain CDIF29627_RS06280 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS06290 PF07722 Peptidase C26 CDIF29627_RS06295 PF13520 Amino acid permease CDIF29627_RS06305 PF06874 Firmicute fructose-1,6-bisphosphatase CDIF29627_RS06345 PF12685 SpoIIIAH-like protein CDIF29627_RS06350 PF03780 Asp23 family, cell envelope-related function CDIF29627_RS06355 PF01029 NusB family CDIF29627_RS06360 PF00814 Glycoprotease family CDIF29627_RS06365 PF02601 Exonuclease VII, large subunit CDIF29627_RS06365 PF13742 OB-fold nucleic acid binding domain CDIF29627_RS06375 PF00348 Polyprenyl synthetase CDIF29627_RS06380 PF02681 Divergent PAP2 family CDIF29627_RS06385 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDIF29627_RS06385 PF02779 Transketolase, pyrimidine binding domain CDIF29627_RS06385 PF02780 Transketolase, C-terminal domain CDIF29627_RS06390 PF01479 S4 domain CDIF29627_RS06390 PF01728 FtsJ-like methyltransferase CDIF29627_RS06395 PF02463 RecF/RecN/SMC N terminal domain CDIF29627_RS06405 PF00583 Acetyltransferase (GNAT) family CDIF29627_RS06410 PF00583 Acetyltransferase (GNAT) family CDIF29627_RS06415 PF17820 PDZ domain CDIF29627_RS06415 PF05580 SpoIVB peptidase S55 CDIF29627_RS06420 PF00072 Response regulator receiver domain CDIF29627_RS06420 PF08769 Sporulation initiation factor Spo0A C terminal CDIF29627_RS06435 PF00535 Glycosyl transferase family 2 CDIF29627_RS06450 PF00293 NUDIX domain CDIF29627_RS06460 PF00589 Phage integrase family CDIF29627_RS06460 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29627_RS06465 PF01676 Metalloenzyme superfamily CDIF29627_RS06470 PF01048 Phosphorylase superfamily CDIF29627_RS06475 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CDIF29627_RS06475 PF00591 Glycosyl transferase family, a/b domain CDIF29627_RS06475 PF02885 Glycosyl transferase family, helical bundle domain CDIF29627_RS06480 PF02618 YceG-like family CDIF29627_RS06485 PF01596 O-methyltransferase CDIF29627_RS06490 PF16325 Peptidase family U32 C-terminal domain CDIF29627_RS06490 PF01136 Peptidase family U32 CDIF29627_RS06495 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS06495 PF03717 Penicillin-binding Protein dimerisation domain CDIF29627_RS06495 PF03793 PASTA domain CDIF29627_RS06595 PF04892 VanZ like family CDIF29627_RS06615 PF04542 Sigma-70 region 2 CDIF29627_RS06615 PF04545 Sigma-70, region 4 CDIF29627_RS06645 PF08207 Elongation factor P (EF-P) KOW-like domain CDIF29627_RS06645 PF09285 Elongation factor P, C-terminal CDIF29627_RS06645 PF01132 Elongation factor P (EF-P) OB domain CDIF29627_RS06655 PF00035 Double-stranded RNA binding motif CDIF29627_RS06655 PF14622 Ribonuclease-III-like CDIF29627_RS06665 PF06470 SMC proteins Flexible Hinge Domain CDIF29627_RS06665 PF02463 RecF/RecN/SMC N terminal domain CDIF29627_RS06670 PF00448 SRP54-type protein, GTPase domain CDIF29627_RS06670 PF02881 SRP54-type protein, helical bundle domain CDIF29627_RS06675 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CDIF29627_RS06680 PF00448 SRP54-type protein, GTPase domain CDIF29627_RS06680 PF02881 SRP54-type protein, helical bundle domain CDIF29627_RS06680 PF02978 Signal peptide binding domain CDIF29627_RS06685 PF00886 Ribosomal protein S16 CDIF29627_RS06695 PF05239 PRC-barrel domain CDIF29627_RS06695 PF01782 RimM N-terminal domain CDIF29627_RS06700 PF01746 tRNA (Guanine-1)-methyltransferase CDIF29627_RS06705 PF01245 Ribosomal protein L19 CDIF29627_RS06710 PF01926 50S ribosome-binding GTPase CDIF29627_RS06715 PF05525 Branched-chain amino acid transport protein CDIF29627_RS06720 PF05525 Branched-chain amino acid transport protein CDIF29627_RS06725 PF00317 Ribonucleotide reductase, all-alpha domain CDIF29627_RS06725 PF02867 Ribonucleotide reductase, barrel domain CDIF29627_RS06725 PF03477 ATP cone domain CDIF29627_RS06730 PF01351 Ribonuclease HII CDIF29627_RS06735 PF01070 FMN-dependent dehydrogenase CDIF29627_RS06760 PF00005 ABC transporter CDIF29627_RS06765 PF00196 Bacterial regulatory proteins, luxR family CDIF29627_RS06765 PF00072 Response regulator receiver domain CDIF29627_RS06770 PF07730 Histidine kinase CDIF29627_RS06775 PF02021 Uncharacterised protein family UPF0102 CDIF29627_RS06780 PF01078 Magnesium chelatase, subunit ChlI CDIF29627_RS06780 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDIF29627_RS06785 PF02481 DNA recombination-mediator protein A CDIF29627_RS06785 PF17782 DprA winged helix domain CDIF29627_RS06790 PF01396 Topoisomerase DNA binding C4 zinc finger CDIF29627_RS06790 PF01131 DNA topoisomerase CDIF29627_RS06790 PF01751 Toprim domain CDIF29627_RS06795 PF06018 CodY GAF-like domain CDIF29627_RS06795 PF08222 CodY helix-turn-helix domain CDIF29627_RS06800 PF12002 MgsA AAA+ ATPase C terminal CDIF29627_RS06800 PF16193 AAA C-terminal domain CDIF29627_RS06800 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDIF29627_RS06810 PF02082 Transcriptional regulator CDIF29627_RS06815 PF00266 Aminotransferase class-V CDIF29627_RS06820 PF01592 NifU-like N terminal domain CDIF29627_RS06830 PF02272 DHHA1 domain CDIF29627_RS06830 PF01411 tRNA synthetases class II (A) CDIF29627_RS06830 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29627_RS06835 PF06135 IreB regulatory phosphoprotein CDIF29627_RS06845 PF03652 Holliday junction resolvase CDIF29627_RS06850 PF06949 Protein of unknown function (DUF1292) CDIF29627_RS06855 PF01475 Ferric uptake regulator family CDIF29627_RS06865 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS06865 PF17770 Ribonuclease J C-terminal domain CDIF29627_RS06865 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDIF29627_RS06875 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29627_RS06875 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29627_RS06885 PF02311 AraC-like ligand binding domain CDIF29627_RS06885 PF12833 Helix-turn-helix domain CDIF29627_RS06890 PF02163 Peptidase family M50 CDIF29627_RS06895 PF02616 Segregation and condensation protein ScpA CDIF29627_RS06900 PF04079 Segregation and condensation complex subunit ScpB CDIF29627_RS06920 PF02789 Cytosol aminopeptidase family, N-terminal domain CDIF29627_RS06920 PF00883 Cytosol aminopeptidase family, catalytic domain CDIF29627_RS06940 PF02146 Sir2 family CDIF29627_RS06945 PF13457 GW (Gly-Tryp) dipeptide domain CDIF29627_RS06945 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29627_RS06950 PF01336 OB-fold nucleic acid binding domain CDIF29627_RS06950 PF11490 DNA polymerase III polC-type N-terminus II CDIF29627_RS06950 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29627_RS06950 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29627_RS06950 PF14579 Helix-hairpin-helix motif CDIF29627_RS06950 PF02811 PHP domain CDIF29627_RS06950 PF00929 Exonuclease CDIF29627_RS06955 PF17384 RimP C-terminal SH3 domain CDIF29627_RS06955 PF02576 RimP N-terminal domain CDIF29627_RS06960 PF00575 S1 RNA binding domain CDIF29627_RS06960 PF08529 NusA N-terminal domain CDIF29627_RS06960 PF13184 NusA-like KH domain CDIF29627_RS06965 PF04296 Protein of unknown function (DUF448) CDIF29627_RS06970 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CDIF29627_RS06975 PF11987 Translation-initiation factor 2 CDIF29627_RS06975 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS06975 PF04760 Translation initiation factor IF-2, N-terminal region CDIF29627_RS06980 PF02033 Ribosome-binding factor A CDIF29627_RS06985 PF02272 DHHA1 domain CDIF29627_RS06985 PF01368 DHH family CDIF29627_RS06990 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDIF29627_RS06990 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDIF29627_RS06995 PF06574 FAD synthetase CDIF29627_RS06995 PF01687 Riboflavin kinase CDIF29627_RS07005 PF00312 Ribosomal protein S15 CDIF29627_RS07010 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29627_RS07015 PF00013 KH domain CDIF29627_RS07015 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDIF29627_RS07015 PF00575 S1 RNA binding domain CDIF29627_RS07015 PF01138 3' exoribonuclease family, domain 1 CDIF29627_RS07015 PF03725 3' exoribonuclease family, domain 2 CDIF29627_RS07020 PF11738 Protein of unknown function (DUF3298) CDIF29627_RS07020 PF01522 Polysaccharide deacetylase CDIF29627_RS07020 PF13739 Deacetylase PdaC CDIF29627_RS07025 PF00675 Insulinase (Peptidase family M16) CDIF29627_RS07025 PF05193 Peptidase M16 inactive domain CDIF29627_RS07030 PF05239 PRC-barrel domain CDIF29627_RS07035 PF13840 ACT domain CDIF29627_RS07035 PF00696 Amino acid kinase family CDIF29627_RS07040 PF00574 Clp protease CDIF29627_RS07045 PF01580 FtsK/SpoIIIE family CDIF29627_RS07045 PF17854 FtsK alpha domain CDIF29627_RS07045 PF09397 Ftsk gamma domain CDIF29627_RS07055 PF04055 Radical SAM superfamily CDIF29627_RS07055 PF18693 TRAM domain CDIF29627_RS07055 PF00919 Uncharacterized protein family UPF0004 CDIF29627_RS07060 PF01066 CDP-alcohol phosphatidyltransferase CDIF29627_RS07065 PF00154 recA bacterial DNA recombination protein CDIF29627_RS07070 PF12072 Domain of unknown function (DUF3552) CDIF29627_RS07070 PF00013 KH domain CDIF29627_RS07070 PF01966 HD domain CDIF29627_RS07080 PF10502 Signal peptidase, peptidase S26 CDIF29627_RS07085 PF02673 Bacitracin resistance protein BacA CDIF29627_RS07095 PF00206 Lyase CDIF29627_RS07095 PF10415 Fumarase C C-terminus CDIF29627_RS07105 PF02378 Phosphotransferase system, EIIC CDIF29627_RS07105 PF00367 phosphotransferase system, EIIB CDIF29627_RS07110 PF01380 SIS domain CDIF29627_RS07110 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS07115 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29627_RS07115 PF02056 Family 4 glycosyl hydrolase CDIF29627_RS07120 PF00155 Aminotransferase class I and II CDIF29627_RS07130 PF03372 Endonuclease/Exonuclease/phosphatase family CDIF29627_RS07145 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29627_RS07145 PF00534 Glycosyl transferases group 1 CDIF29627_RS07150 PF03551 Transcriptional regulator PadR-like family CDIF29627_RS07170 PF00005 ABC transporter CDIF29627_RS07185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS07185 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS07200 PF00313 'Cold-shock' DNA-binding domain CDIF29627_RS07230 PF01381 Helix-turn-helix CDIF29627_RS07275 PF01476 LysM domain CDIF29627_RS07275 PF00877 NlpC/P60 family CDIF29627_RS07275 PF08239 Bacterial SH3 domain CDIF29627_RS07290 PF04865 Baseplate J-like protein CDIF29627_RS07295 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) CDIF29627_RS07340 PF01381 Helix-turn-helix CDIF29627_RS07345 PF07690 Major Facilitator Superfamily CDIF29627_RS07355 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29627_RS07355 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29627_RS07360 PF03600 Citrate transporter CDIF29627_RS07360 PF02080 TrkA-C domain CDIF29627_RS07365 PF03746 LamB/YcsF family CDIF29627_RS07370 PF01566 Natural resistance-associated macrophage protein CDIF29627_RS07375 PF02682 Carboxyltransferase domain, subdomain C and D CDIF29627_RS07380 PF02626 Carboxyltransferase domain, subdomain A and B CDIF29627_RS07385 PF01381 Helix-turn-helix CDIF29627_RS07385 PF08671 Anti-repressor SinI CDIF29627_RS07390 PF13378 Enolase C-terminal domain-like CDIF29627_RS07390 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDIF29627_RS07400 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDIF29627_RS07400 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CDIF29627_RS07435 PF12323 Helix-turn-helix domain CDIF29627_RS07435 PF01385 Probable transposase CDIF29627_RS07435 PF07282 Putative transposase DNA-binding domain CDIF29627_RS07440 PF18389 TrmO C-terminal domain CDIF29627_RS07440 PF01980 tRNA-methyltransferase O CDIF29627_RS07445 PF07687 Peptidase dimerisation domain CDIF29627_RS07445 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS07450 PF02016 LD-carboxypeptidase N-terminal domain CDIF29627_RS07450 PF17676 LD-carboxypeptidase C-terminal domain CDIF29627_RS07465 PF03009 Glycerophosphoryl diester phosphodiesterase family CDIF29627_RS07470 PF00550 Phosphopantetheine attachment site CDIF29627_RS07470 PF00501 AMP-binding enzyme CDIF29627_RS07470 PF13193 AMP-binding enzyme C-terminal domain CDIF29627_RS07470 PF00668 Condensation domain CDIF29627_RS07485 PF16326 ABC transporter C-terminal domain CDIF29627_RS07485 PF00005 ABC transporter CDIF29627_RS07485 PF12848 ABC transporter CDIF29627_RS07495 PF00155 Aminotransferase class I and II CDIF29627_RS07495 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS07500 PF01820 D-ala D-ala ligase N-terminus CDIF29627_RS07500 PF07478 D-ala D-ala ligase C-terminus CDIF29627_RS07505 PF02464 Competence-damaged protein CDIF29627_RS07505 PF00994 Probable molybdopterin binding domain CDIF29627_RS07505 PF18146 Damage-inducible protein CinA KH domain CDIF29627_RS07520 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS07520 PF13188 PAS domain CDIF29627_RS07520 PF00158 Sigma-54 interaction domain CDIF29627_RS07530 PF16199 Radical_SAM C-terminal domain CDIF29627_RS07530 PF04055 Radical SAM superfamily CDIF29627_RS07565 PF13333 Integrase core domain CDIF29627_RS07565 PF00665 Integrase core domain CDIF29627_RS07570 PF13426 PAS domain CDIF29627_RS07570 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS07570 PF05231 MASE1 CDIF29627_RS07570 PF08447 PAS fold CDIF29627_RS07570 PF08448 PAS fold CDIF29627_RS07570 PF00563 EAL domain CDIF29627_RS07575 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS07580 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS07580 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS07580 PF00563 EAL domain CDIF29627_RS07585 PF13411 MerR HTH family regulatory protein CDIF29627_RS07585 PF06445 GyrI-like small molecule binding domain CDIF29627_RS07600 PF02308 MgtC family CDIF29627_RS07605 PF00857 Isochorismatase family CDIF29627_RS07625 PF01522 Polysaccharide deacetylase CDIF29627_RS07630 PF00929 Exonuclease CDIF29627_RS07630 PF13307 Helicase C-terminal domain CDIF29627_RS07635 PF00075 RNase H CDIF29627_RS07640 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDIF29627_RS07640 PF00578 AhpC/TSA family CDIF29627_RS07655 PF04294 VanW like protein CDIF29627_RS07660 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS07660 PF13188 PAS domain CDIF29627_RS07660 PF00158 Sigma-54 interaction domain CDIF29627_RS07670 PF03788 LrgA family CDIF29627_RS07675 PF04172 LrgB-like family CDIF29627_RS07680 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29627_RS07680 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29627_RS07690 PF00188 Cysteine-rich secretory protein family CDIF29627_RS07695 PF01522 Polysaccharide deacetylase CDIF29627_RS07695 PF13739 Deacetylase PdaC CDIF29627_RS07695 PF11738 Protein of unknown function (DUF3298) CDIF29627_RS07700 PF00117 Glutamine amidotransferase class-I CDIF29627_RS07705 PF00425 chorismate binding enzyme CDIF29627_RS07705 PF04715 Anthranilate synthase component I, N terminal region CDIF29627_RS07710 PF01063 Amino-transferase class IV CDIF29627_RS07720 PF01227 GTP cyclohydrolase I CDIF29627_RS07725 PF00809 Pterin binding enzyme CDIF29627_RS07730 PF02152 Dihydroneopterin aldolase CDIF29627_RS07735 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDIF29627_RS07740 PF00793 DAHP synthetase I family CDIF29627_RS07740 PF18152 DAHP synthase ferredoxin-like domain CDIF29627_RS07745 PF10410 DnaB-helicase binding domain of primase CDIF29627_RS07745 PF01807 CHC2 zinc finger CDIF29627_RS07745 PF08275 DNA primase catalytic core, N-terminal domain CDIF29627_RS07750 PF04542 Sigma-70 region 2 CDIF29627_RS07750 PF00140 Sigma-70 factor, region 1.2 CDIF29627_RS07750 PF03979 Sigma-70 factor, region 1.1 CDIF29627_RS07750 PF04545 Sigma-70, region 4 CDIF29627_RS07750 PF04539 Sigma-70 region 3 CDIF29627_RS07755 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CDIF29627_RS07760 PF01784 NIF3 (NGG1p interacting factor 3) CDIF29627_RS07765 PF03358 NADPH-dependent FMN reductase CDIF29627_RS07785 PF00155 Aminotransferase class I and II CDIF29627_RS07785 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS07795 PF00072 Response regulator receiver domain CDIF29627_RS07795 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS07800 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS07800 PF00672 HAMP domain CDIF29627_RS07800 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS07805 PF00005 ABC transporter CDIF29627_RS07805 PF12704 MacB-like periplasmic core domain CDIF29627_RS07805 PF02687 FtsX-like permease family CDIF29627_RS07820 PF00144 Beta-lactamase CDIF29627_RS07825 PF17773 UPF0176 acylphosphatase like domain CDIF29627_RS07825 PF00581 Rhodanese-like domain CDIF29627_RS07830 PF01061 ABC-2 type transporter CDIF29627_RS07835 PF00664 ABC transporter transmembrane region CDIF29627_RS07835 PF00005 ABC transporter CDIF29627_RS07840 PF00005 ABC transporter CDIF29627_RS07840 PF00664 ABC transporter transmembrane region CDIF29627_RS07845 PF02915 Rubrerythrin CDIF29627_RS07855 PF01738 Dienelactone hydrolase family CDIF29627_RS07860 PF00563 EAL domain CDIF29627_RS07860 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS07860 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS07875 PF07670 Nucleoside recognition CDIF29627_RS07875 PF07664 Ferrous iron transport protein B C terminus CDIF29627_RS07875 PF17910 FeoB cytosolic helical domain CDIF29627_RS07875 PF02421 Ferrous iron transport protein B CDIF29627_RS07890 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS07895 PF00005 ABC transporter CDIF29627_RS07925 PF09383 NIL domain CDIF29627_RS07925 PF00005 ABC transporter CDIF29627_RS07930 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS07935 PF03180 NLPA lipoprotein CDIF29627_RS07940 PF00989 PAS fold CDIF29627_RS07940 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS07940 PF16736 Single Cache-like CDIF29627_RS07940 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS07945 PF02245 Methylpurine-DNA glycosylase (MPG) CDIF29627_RS07955 PF03807 NADP oxidoreductase coenzyme F420-dependent CDIF29627_RS07955 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDIF29627_RS07960 PF06207 Protein of unknown function (DUF1002) CDIF29627_RS07970 PF03979 Sigma-70 factor, region 1.1 CDIF29627_RS07970 PF04545 Sigma-70, region 4 CDIF29627_RS07970 PF04539 Sigma-70 region 3 CDIF29627_RS07970 PF04542 Sigma-70 region 2 CDIF29627_RS07970 PF00140 Sigma-70 factor, region 1.2 CDIF29627_RS07975 PF03023 Lipid II flippase MurJ CDIF29627_RS07980 PF01791 DeoC/LacD family aldolase CDIF29627_RS07990 PF00005 ABC transporter CDIF29627_RS08000 PF01554 MatE CDIF29627_RS08015 PF04205 FMN-binding domain CDIF29627_RS08015 PF12801 4Fe-4S binding domain CDIF29627_RS08040 PF02569 Pantoate-beta-alanine ligase CDIF29627_RS08045 PF02548 Ketopantoate hydroxymethyltransferase CDIF29627_RS08055 PF13426 PAS domain CDIF29627_RS08055 PF00563 EAL domain CDIF29627_RS08055 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS08065 PF06445 GyrI-like small molecule binding domain CDIF29627_RS08065 PF13411 MerR HTH family regulatory protein CDIF29627_RS08070 PF02421 Ferrous iron transport protein B CDIF29627_RS08070 PF17910 FeoB cytosolic helical domain CDIF29627_RS08070 PF07670 Nucleoside recognition CDIF29627_RS08070 PF07664 Ferrous iron transport protein B C terminus CDIF29627_RS08090 PF00579 tRNA synthetases class I (W and Y) CDIF29627_RS08090 PF01479 S4 domain CDIF29627_RS08095 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CDIF29627_RS08095 PF01522 Polysaccharide deacetylase CDIF29627_RS08105 PF02915 Rubrerythrin CDIF29627_RS08110 PF04015 Domain of unknown function (DUF362) CDIF29627_RS08115 PF01979 Amidohydrolase family CDIF29627_RS08120 PF02687 FtsX-like permease family CDIF29627_RS08120 PF12704 MacB-like periplasmic core domain CDIF29627_RS08125 PF00005 ABC transporter CDIF29627_RS08135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS08140 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS08140 PF00072 Response regulator receiver domain CDIF29627_RS08145 PF00005 ABC transporter CDIF29627_RS08150 PF02687 FtsX-like permease family CDIF29627_RS08165 PF00175 Oxidoreductase NAD-binding domain CDIF29627_RS08165 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29627_RS08170 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDIF29627_RS08170 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS08170 PF13247 4Fe-4S dicluster domain CDIF29627_RS08175 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS08175 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS08175 PF00563 EAL domain CDIF29627_RS08180 PF00005 ABC transporter CDIF29627_RS08185 PF02687 FtsX-like permease family CDIF29627_RS08190 PF01554 MatE CDIF29627_RS08200 PF02525 Flavodoxin-like fold CDIF29627_RS08215 PF03006 Haemolysin-III related CDIF29627_RS08225 PF13393 Histidyl-tRNA synthetase CDIF29627_RS08230 PF01634 ATP phosphoribosyltransferase CDIF29627_RS08235 PF00155 Aminotransferase class I and II CDIF29627_RS08240 PF00475 Imidazoleglycerol-phosphate dehydratase CDIF29627_RS08245 PF00117 Glutamine amidotransferase class-I CDIF29627_RS08250 PF00977 Histidine biosynthesis protein CDIF29627_RS08255 PF00977 Histidine biosynthesis protein CDIF29627_RS08260 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CDIF29627_RS08260 PF01502 Phosphoribosyl-AMP cyclohydrolase CDIF29627_RS08265 PF13520 Amino acid permease CDIF29627_RS08270 PF01522 Polysaccharide deacetylase CDIF29627_RS08280 PF08281 Sigma-70, region 4 CDIF29627_RS08280 PF04542 Sigma-70 region 2 CDIF29627_RS08285 PF11738 Protein of unknown function (DUF3298) CDIF29627_RS08285 PF13739 Deacetylase PdaC CDIF29627_RS08290 PF11738 Protein of unknown function (DUF3298) CDIF29627_RS08290 PF13739 Deacetylase PdaC CDIF29627_RS08295 PF13478 XdhC Rossmann domain CDIF29627_RS08295 PF02625 XdhC and CoxI family CDIF29627_RS08310 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDIF29627_RS08310 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDIF29627_RS08315 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDIF29627_RS08315 PF00205 Thiamine pyrophosphate enzyme, central domain CDIF29627_RS08315 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDIF29627_RS08320 PF00589 Phage integrase family CDIF29627_RS08320 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29627_RS08350 PF02498 BRO family, N-terminal domain CDIF29627_RS08350 PF10548 P22AR C-terminal domain CDIF29627_RS08365 PF01381 Helix-turn-helix CDIF29627_RS08445 PF10668 Phage terminase small subunit CDIF29627_RS08455 PF04055 Radical SAM superfamily CDIF29627_RS08455 PF00919 Uncharacterized protein family UPF0004 CDIF29627_RS08455 PF01938 TRAM domain CDIF29627_RS08515 PF09393 Phage tail tube protein CDIF29627_RS08575 PF10934 Protein of unknown function (DUF2634) CDIF29627_RS08580 PF04865 Baseplate J-like protein CDIF29627_RS08625 PF05257 CHAP domain CDIF29627_RS08625 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS08625 PF08460 Bacterial SH3 domain CDIF29627_RS08640 PF05067 Manganese containing catalase CDIF29627_RS08645 PF03190 Protein of unknown function, DUF255 CDIF29627_RS08655 PF12146 Serine aminopeptidase, S33 CDIF29627_RS08660 PF00005 ABC transporter CDIF29627_RS08670 PF01381 Helix-turn-helix CDIF29627_RS08680 PF01476 LysM domain CDIF29627_RS08680 PF06725 3D domain CDIF29627_RS08690 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29627_RS08690 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29627_RS08690 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29627_RS08690 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29627_RS08695 PF03631 Virulence factor BrkB CDIF29627_RS08700 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS08700 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS08700 PF00672 HAMP domain CDIF29627_RS08700 PF00989 PAS fold CDIF29627_RS08700 PF18698 Histidine kinase sensor domain CDIF29627_RS08705 PF01842 ACT domain CDIF29627_RS08705 PF03447 Homoserine dehydrogenase, NAD binding domain CDIF29627_RS08705 PF00742 Homoserine dehydrogenase CDIF29627_RS08715 PF00815 Histidinol dehydrogenase CDIF29627_RS08720 PF00561 alpha/beta hydrolase fold CDIF29627_RS08735 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29627_RS08745 PF00005 ABC transporter CDIF29627_RS08750 PF02653 Branched-chain amino acid transport system / permease component CDIF29627_RS08755 PF13407 Periplasmic binding protein domain CDIF29627_RS08760 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29627_RS08760 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29627_RS08770 PF03814 Potassium-transporting ATPase A subunit CDIF29627_RS08780 PF02669 K+-transporting ATPase, c chain CDIF29627_RS08785 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS08790 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29627_RS08800 PF00557 Metallopeptidase family M24 CDIF29627_RS08800 PF02810 SEC-C motif CDIF29627_RS08805 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CDIF29627_RS08810 PF01541 GIY-YIG catalytic domain CDIF29627_RS08815 PF08543 Phosphomethylpyrimidine kinase CDIF29627_RS08815 PF02581 Thiamine monophosphate synthase CDIF29627_RS08820 PF02110 Hydroxyethylthiazole kinase family CDIF29627_RS08825 PF02581 Thiamine monophosphate synthase CDIF29627_RS08830 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS08840 PF00005 ABC transporter CDIF29627_RS08840 PF13732 Domain of unknown function (DUF4162) CDIF29627_RS08850 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS08855 PF00005 ABC transporter CDIF29627_RS08855 PF08402 TOBE domain CDIF29627_RS08880 PF01979 Amidohydrolase family CDIF29627_RS08890 PF00005 ABC transporter CDIF29627_RS08895 PF12679 ABC-2 family transporter protein CDIF29627_RS08900 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS08900 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS08900 PF00563 EAL domain CDIF29627_RS08905 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS08910 PF00005 ABC transporter CDIF29627_RS08925 PF05552 Conserved TM helix CDIF29627_RS08925 PF00924 Mechanosensitive ion channel CDIF29627_RS08935 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS08935 PF00258 Flavodoxin CDIF29627_RS08950 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDIF29627_RS08950 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDIF29627_RS08955 PF00733 Asparagine synthase CDIF29627_RS08955 PF13537 Glutamine amidotransferase domain CDIF29627_RS08960 PF13180 PDZ domain CDIF29627_RS08965 PF02342 TerD domain CDIF29627_RS08970 PF02342 TerD domain CDIF29627_RS08975 PF02342 TerD domain CDIF29627_RS08980 PF00690 Cation transporter/ATPase, N-terminus CDIF29627_RS08980 PF00689 Cation transporting ATPase, C-terminus CDIF29627_RS08985 PF14266 Putative component of 'biosynthetic module' CDIF29627_RS08990 PF05816 Toxic anion resistance protein (TelA) CDIF29627_RS09020 PF05684 Protein of unknown function (DUF819) CDIF29627_RS09025 PF01244 Membrane dipeptidase (Peptidase family M19) CDIF29627_RS09030 PF01032 FecCD transport family CDIF29627_RS09035 PF01032 FecCD transport family CDIF29627_RS09040 PF00005 ABC transporter CDIF29627_RS09045 PF01497 Periplasmic binding protein CDIF29627_RS09050 PF00360 Phytochrome region CDIF29627_RS09050 PF00563 EAL domain CDIF29627_RS09050 PF01590 GAF domain CDIF29627_RS09050 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS09055 PF02342 TerD domain CDIF29627_RS09060 PF03180 NLPA lipoprotein CDIF29627_RS09065 PF10437 Bacterial lipoate protein ligase C-terminus CDIF29627_RS09065 PF03099 Biotin/lipoate A/B protein ligase family CDIF29627_RS09070 PF03553 Na+/H+ antiporter family CDIF29627_RS09085 PF02347 Glycine cleavage system P-protein CDIF29627_RS09090 PF02347 Glycine cleavage system P-protein CDIF29627_RS09100 PF06865 Pyrimidine/purine nucleoside phosphorylase CDIF29627_RS09105 PF01979 Amidohydrolase family CDIF29627_RS09120 PF07883 Cupin domain CDIF29627_RS09120 PF01381 Helix-turn-helix CDIF29627_RS09125 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS09130 PF03009 Glycerophosphoryl diester phosphodiesterase family CDIF29627_RS09135 PF12464 Maltose acetyltransferase CDIF29627_RS09135 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29627_RS09150 PF00005 ABC transporter CDIF29627_RS09160 PF00072 Response regulator receiver domain CDIF29627_RS09160 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS09165 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS09165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS09185 PF01638 HxlR-like helix-turn-helix CDIF29627_RS09190 PF01470 Pyroglutamyl peptidase CDIF29627_RS09220 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS09220 PF08359 YsiA-like protein, C-terminal region CDIF29627_RS09225 PF01156 Inosine-uridine preferring nucleoside hydrolase CDIF29627_RS09255 PF00072 Response regulator receiver domain CDIF29627_RS09255 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS09260 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS09260 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS09265 PF00085 Thioredoxin CDIF29627_RS09270 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS09275 PF01022 Bacterial regulatory protein, arsR family CDIF29627_RS09290 PF03600 Citrate transporter CDIF29627_RS09295 PF01235 Sodium:alanine symporter family CDIF29627_RS09300 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDIF29627_RS09305 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDIF29627_RS09305 PF00925 GTP cyclohydrolase II CDIF29627_RS09310 PF00677 Lumazine binding domain CDIF29627_RS09315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29627_RS09315 PF01872 RibD C-terminal domain CDIF29627_RS09320 PF00270 DEAD/DEAH box helicase CDIF29627_RS09320 PF00271 Helicase conserved C-terminal domain CDIF29627_RS09320 PF09382 RQC domain CDIF29627_RS09320 PF00570 HRDC domain CDIF29627_RS09320 PF16124 RecQ zinc-binding CDIF29627_RS09325 PF01964 Radical SAM ThiC family CDIF29627_RS09335 PF00581 Rhodanese-like domain CDIF29627_RS09335 PF00899 ThiF family CDIF29627_RS09340 PF05690 Thiazole biosynthesis protein ThiG CDIF29627_RS09345 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29627_RS09345 PF04055 Radical SAM superfamily CDIF29627_RS09355 PF03606 C4-dicarboxylate anaerobic carrier CDIF29627_RS09365 PF12804 MobA-like NTP transferase domain CDIF29627_RS09375 PF01906 Putative heavy-metal-binding CDIF29627_RS09380 PF00994 Probable molybdopterin binding domain CDIF29627_RS09385 PF06463 Molybdenum Cofactor Synthesis C CDIF29627_RS09385 PF04055 Radical SAM superfamily CDIF29627_RS09390 PF01967 MoaC family CDIF29627_RS09430 PF01553 Acyltransferase CDIF29627_RS09465 PF02690 Na+/Pi-cotransporter CDIF29627_RS09480 PF10609 NUBPL iron-transfer P-loop NTPase CDIF29627_RS09490 PF02310 B12 binding domain CDIF29627_RS09490 PF02607 B12 binding domain CDIF29627_RS09495 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDIF29627_RS09505 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS09510 PF01381 Helix-turn-helix CDIF29627_RS09510 PF07883 Cupin domain CDIF29627_RS09515 PF02447 GntP family permease CDIF29627_RS09520 PF13188 PAS domain CDIF29627_RS09520 PF00989 PAS fold CDIF29627_RS09520 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS09520 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS09520 PF13426 PAS domain CDIF29627_RS09525 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS09525 PF00072 Response regulator receiver domain CDIF29627_RS09525 PF00158 Sigma-54 interaction domain CDIF29627_RS09530 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29627_RS09540 PF04397 LytTr DNA-binding domain CDIF29627_RS09540 PF00072 Response regulator receiver domain CDIF29627_RS09565 PF03616 Sodium/glutamate symporter CDIF29627_RS09570 PF00962 Adenosine/AMP deaminase CDIF29627_RS09575 PF12787 EcsC protein family CDIF29627_RS09580 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29627_RS09585 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29627_RS09590 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS09590 PF08486 Stage II sporulation protein CDIF29627_RS09600 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS09605 PF00005 ABC transporter CDIF29627_RS09625 PF01327 Polypeptide deformylase CDIF29627_RS09655 PF02567 Phenazine biosynthesis-like protein CDIF29627_RS09660 PF11208 Protein of unknown function (DUF2992) CDIF29627_RS09665 PF06961 Protein of unknown function (DUF1294) CDIF29627_RS09680 PF00293 NUDIX domain CDIF29627_RS09690 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDIF29627_RS09690 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDIF29627_RS09705 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29627_RS09730 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29627_RS09735 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS09740 PF00005 ABC transporter CDIF29627_RS09745 PF03960 ArsC family CDIF29627_RS09755 PF02540 NAD synthase CDIF29627_RS09760 PF02926 THUMP domain CDIF29627_RS09760 PF01170 Putative RNA methylase family UPF0020 CDIF29627_RS09770 PF00072 Response regulator receiver domain CDIF29627_RS09770 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS09775 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS09775 PF00672 HAMP domain CDIF29627_RS09775 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS09780 PF01416 tRNA pseudouridine synthase CDIF29627_RS09785 PF00764 Arginosuccinate synthase CDIF29627_RS09795 PF07739 TipAS antibiotic-recognition domain CDIF29627_RS09795 PF13411 MerR HTH family regulatory protein CDIF29627_RS09805 PF04239 Protein of unknown function (DUF421) CDIF29627_RS09820 PF01370 NAD dependent epimerase/dehydratase family CDIF29627_RS09840 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDIF29627_RS09840 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDIF29627_RS09840 PF13187 4Fe-4S dicluster domain CDIF29627_RS09845 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29627_RS09845 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS09850 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS09850 PF03466 LysR substrate binding domain CDIF29627_RS09855 PF02342 TerD domain CDIF29627_RS09860 PF02342 TerD domain CDIF29627_RS09865 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29627_RS09865 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29627_RS09880 PF13407 Periplasmic binding protein domain CDIF29627_RS09880 PF00356 Bacterial regulatory proteins, lacI family CDIF29627_RS09890 PF00251 Glycosyl hydrolases family 32 N-terminal domain CDIF29627_RS09890 PF08244 Glycosyl hydrolases family 32 C terminal CDIF29627_RS09895 PF00294 pfkB family carbohydrate kinase CDIF29627_RS09910 PF07690 Major Facilitator Superfamily CDIF29627_RS09915 PF07690 Major Facilitator Superfamily CDIF29627_RS09940 PF00300 Histidine phosphatase superfamily (branch 1) CDIF29627_RS09950 PF02224 Cytidylate kinase CDIF29627_RS09955 PF01553 Acyltransferase CDIF29627_RS09960 PF02401 LytB protein CDIF29627_RS09985 PF01979 Amidohydrolase family CDIF29627_RS09985 PF13382 Adenine deaminase C-terminal domain CDIF29627_RS09990 PF00578 AhpC/TSA family CDIF29627_RS09995 PF03883 Peroxide stress protein YaaA CDIF29627_RS10000 PF00690 Cation transporter/ATPase, N-terminus CDIF29627_RS10000 PF00689 Cation transporting ATPase, C-terminus CDIF29627_RS10005 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29627_RS10010 PF04204 Homoserine O-succinyltransferase CDIF29627_RS10015 PF01047 MarR family CDIF29627_RS10020 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS10020 PF01434 Peptidase family M41 CDIF29627_RS10020 PF17862 AAA+ lid domain CDIF29627_RS10020 PF06480 FtsH Extracellular CDIF29627_RS10025 PF13493 Domain of unknown function (DUF4118) CDIF29627_RS10025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS10025 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS10025 PF02702 Osmosensitive K+ channel His kinase sensor domain CDIF29627_RS10030 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS10030 PF00072 Response regulator receiver domain CDIF29627_RS10035 PF01544 CorA-like Mg2+ transporter protein CDIF29627_RS10045 PF18152 DAHP synthase ferredoxin-like domain CDIF29627_RS10045 PF00793 DAHP synthetase I family CDIF29627_RS10050 PF01761 3-dehydroquinate synthase CDIF29627_RS10055 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDIF29627_RS10060 PF01264 Chorismate synthase CDIF29627_RS10065 PF01817 Chorismate mutase type II CDIF29627_RS10065 PF00800 Prephenate dehydratase CDIF29627_RS10070 PF08501 Shikimate dehydrogenase substrate binding domain CDIF29627_RS10075 PF01202 Shikimate kinase CDIF29627_RS10080 PF02153 Prephenate dehydrogenase CDIF29627_RS10085 PF00563 EAL domain CDIF29627_RS10085 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS10085 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS10090 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS10090 PF17158 Membrane-associated sensor, integral membrane domain CDIF29627_RS10125 PF06445 GyrI-like small molecule binding domain CDIF29627_RS10125 PF12833 Helix-turn-helix domain CDIF29627_RS10155 PF00005 ABC transporter CDIF29627_RS10170 PF08241 Methyltransferase domain CDIF29627_RS10175 PF04073 Aminoacyl-tRNA editing domain CDIF29627_RS10200 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS10205 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29627_RS10235 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS10245 PF02796 Helix-turn-helix domain of resolvase CDIF29627_RS10245 PF00239 Resolvase, N terminal domain CDIF29627_RS10255 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS10260 PF00936 BMC domain CDIF29627_RS10265 PF10662 Ethanolamine utilisation - propanediol utilisation CDIF29627_RS10270 PF00072 Response regulator receiver domain CDIF29627_RS10270 PF03861 ANTAR domain CDIF29627_RS10275 PF07568 Histidine kinase CDIF29627_RS10275 PF12282 Signal transduction histidine kinase CDIF29627_RS10275 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS10280 PF06277 Ethanolamine utilisation protein EutA CDIF29627_RS10285 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CDIF29627_RS10290 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CDIF29627_RS10295 PF00936 BMC domain CDIF29627_RS10300 PF00936 BMC domain CDIF29627_RS10305 PF00171 Aldehyde dehydrogenase family CDIF29627_RS10305 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS10310 PF00936 BMC domain CDIF29627_RS10320 PF06130 Phosphate propanoyltransferase CDIF29627_RS10330 PF03319 Ethanolamine utilisation protein EutN/carboxysome CDIF29627_RS10340 PF04346 Ethanolamine utilisation protein, EutH CDIF29627_RS10345 PF06249 Ethanolamine utilisation protein EutQ CDIF29627_RS10350 PF12833 Helix-turn-helix domain CDIF29627_RS10350 PF02311 AraC-like ligand binding domain CDIF29627_RS10370 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS10370 PF07687 Peptidase dimerisation domain CDIF29627_RS10375 PF03806 AbgT putative transporter family CDIF29627_RS10380 PF00155 Aminotransferase class I and II CDIF29627_RS10385 PF00005 ABC transporter CDIF29627_RS10405 PF00717 Peptidase S24-like CDIF29627_RS10405 PF01726 LexA DNA binding domain CDIF29627_RS10410 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29627_RS10410 PF00589 Phage integrase family CDIF29627_RS10425 PF04232 Stage V sporulation protein S (SpoVS) CDIF29627_RS10430 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDIF29627_RS10435 PF17848 Acetyl-coA carboxylase zinc finger domain CDIF29627_RS10435 PF01039 Carboxyl transferase domain CDIF29627_RS10440 PF02785 Biotin carboxylase C-terminal domain CDIF29627_RS10440 PF00289 Biotin carboxylase, N-terminal domain CDIF29627_RS10440 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29627_RS10445 PF00364 Biotin-requiring enzyme CDIF29627_RS10465 PF02390 Putative methyltransferase CDIF29627_RS10490 PF00005 ABC transporter CDIF29627_RS10500 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS10500 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS10505 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29627_RS10505 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29627_RS10510 PF13302 Acetyltransferase (GNAT) domain CDIF29627_RS10515 PF03466 LysR substrate binding domain CDIF29627_RS10515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS10530 PF02687 FtsX-like permease family CDIF29627_RS10530 PF00005 ABC transporter CDIF29627_RS10530 PF12704 MacB-like periplasmic core domain CDIF29627_RS10535 PF07689 KaiB domain CDIF29627_RS10535 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS10535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS10540 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS10540 PF00072 Response regulator receiver domain CDIF29627_RS10545 PF13486 Reductive dehalogenase subunit CDIF29627_RS10545 PF12838 4Fe-4S dicluster domain CDIF29627_RS10550 PF00072 Response regulator receiver domain CDIF29627_RS10550 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS10555 PF00989 PAS fold CDIF29627_RS10555 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS10555 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS10555 PF16736 Single Cache-like CDIF29627_RS10560 PF00005 ABC transporter CDIF29627_RS10560 PF02687 FtsX-like permease family CDIF29627_RS10560 PF12704 MacB-like periplasmic core domain CDIF29627_RS10595 PF04474 Protein of unknown function (DUF554) CDIF29627_RS10600 PF04073 Aminoacyl-tRNA editing domain CDIF29627_RS10615 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS10620 PF06838 Methionine gamma-lyase CDIF29627_RS10625 PF17209 Hfq protein CDIF29627_RS10635 PF08676 MutL C terminal dimerisation domain CDIF29627_RS10635 PF01119 DNA mismatch repair protein, C-terminal domain CDIF29627_RS10640 PF00488 MutS domain V CDIF29627_RS10640 PF05190 MutS family domain IV CDIF29627_RS10640 PF05192 MutS domain III CDIF29627_RS10640 PF05188 MutS domain II CDIF29627_RS10640 PF01624 MutS domain I CDIF29627_RS10645 PF00005 ABC transporter CDIF29627_RS10650 PF09084 NMT1/THI5 like CDIF29627_RS10655 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS10670 PF01638 HxlR-like helix-turn-helix CDIF29627_RS10675 PF02567 Phenazine biosynthesis-like protein CDIF29627_RS10680 PF00293 NUDIX domain CDIF29627_RS10690 PF04055 Radical SAM superfamily CDIF29627_RS10690 PF01938 TRAM domain CDIF29627_RS10690 PF00919 Uncharacterized protein family UPF0004 CDIF29627_RS10695 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS10695 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS10705 PF17099 Tryptophan transporter TrpP CDIF29627_RS10760 PF02627 Carboxymuconolactone decarboxylase family CDIF29627_RS10785 PF01925 Sulfite exporter TauE/SafE CDIF29627_RS10790 PF12833 Helix-turn-helix domain CDIF29627_RS10795 PF13411 MerR HTH family regulatory protein CDIF29627_RS10800 PF03328 HpcH/HpaI aldolase/citrate lyase family CDIF29627_RS10805 PF00258 Flavodoxin CDIF29627_RS10810 PF00082 Subtilase family CDIF29627_RS10815 PF00561 alpha/beta hydrolase fold CDIF29627_RS10820 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS10820 PF18665 Tetracyclin repressor-like, C-terminal domain CDIF29627_RS10830 PF00920 Dehydratase family CDIF29627_RS10840 PF04892 VanZ like family CDIF29627_RS10860 PF12833 Helix-turn-helix domain CDIF29627_RS10865 PF07690 Major Facilitator Superfamily CDIF29627_RS10870 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS10870 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29627_RS10870 PF17871 AAA lid domain CDIF29627_RS10870 PF07724 AAA domain (Cdc48 subfamily) CDIF29627_RS10870 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29627_RS10885 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS10890 PF00005 ABC transporter CDIF29627_RS10905 PF07687 Peptidase dimerisation domain CDIF29627_RS10905 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS10910 PF01177 Asp/Glu/Hydantoin racemase CDIF29627_RS10920 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDIF29627_RS10920 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDIF29627_RS10925 PF00202 Aminotransferase class-III CDIF29627_RS10930 PF00696 Amino acid kinase family CDIF29627_RS10935 PF01960 ArgJ family CDIF29627_RS10940 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDIF29627_RS10940 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDIF29627_RS10945 PF14268 YoaP-like CDIF29627_RS10945 PF00583 Acetyltransferase (GNAT) family CDIF29627_RS10955 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS10955 PF13305 Tetracyclin repressor-like, C-terminal domain CDIF29627_RS10975 PF13443 Cro/C1-type HTH DNA-binding domain CDIF29627_RS10990 PF00072 Response regulator receiver domain CDIF29627_RS10990 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS10995 PF01380 SIS domain CDIF29627_RS10995 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS11000 PF06962 Putative rRNA methylase CDIF29627_RS11005 PF01479 S4 domain CDIF29627_RS11005 PF00849 RNA pseudouridylate synthase CDIF29627_RS11010 PF01594 AI-2E family transporter CDIF29627_RS11020 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDIF29627_RS11020 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDIF29627_RS11025 PF13840 ACT domain CDIF29627_RS11025 PF01842 ACT domain CDIF29627_RS11025 PF00696 Amino acid kinase family CDIF29627_RS11055 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDIF29627_RS11055 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDIF29627_RS11060 PF00781 Diacylglycerol kinase catalytic domain CDIF29627_RS11090 PF00589 Phage integrase family CDIF29627_RS11090 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29627_RS11100 PF00005 ABC transporter CDIF29627_RS11100 PF12848 ABC transporter CDIF29627_RS11125 PF01799 [2Fe-2S] binding domain CDIF29627_RS11125 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29627_RS11125 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29627_RS11135 PF00860 Permease family CDIF29627_RS11150 PF01180 Dihydroorotate dehydrogenase CDIF29627_RS11155 PF01979 Amidohydrolase family CDIF29627_RS11160 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29627_RS11160 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29627_RS11170 PF01799 [2Fe-2S] binding domain CDIF29627_RS11170 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29627_RS11175 PF01979 Amidohydrolase family CDIF29627_RS11180 PF01979 Amidohydrolase family CDIF29627_RS11185 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS11185 PF07687 Peptidase dimerisation domain CDIF29627_RS11190 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS11200 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29627_RS11200 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29627_RS11205 PF01799 [2Fe-2S] binding domain CDIF29627_RS11205 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29627_RS11210 PF01979 Amidohydrolase family CDIF29627_RS11215 PF00860 Permease family CDIF29627_RS11220 PF00860 Permease family CDIF29627_RS11225 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS11225 PF00158 Sigma-54 interaction domain CDIF29627_RS11225 PF13188 PAS domain CDIF29627_RS11235 PF07728 AAA domain (dynein-related subfamily) CDIF29627_RS11235 PF12102 Domain of unknown function (DUF3578) CDIF29627_RS11250 PF06177 QueT transporter CDIF29627_RS11260 PF01799 [2Fe-2S] binding domain CDIF29627_RS11260 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29627_RS11260 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29627_RS11265 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29627_RS11265 PF01799 [2Fe-2S] binding domain CDIF29627_RS11275 PF00999 Sodium/hydrogen exchanger family CDIF29627_RS11295 PF00005 ABC transporter CDIF29627_RS11300 PF00271 Helicase conserved C-terminal domain CDIF29627_RS11300 PF00270 DEAD/DEAH box helicase CDIF29627_RS11305 PF00860 Permease family CDIF29627_RS11310 PF01554 MatE CDIF29627_RS11320 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29627_RS11325 PF08220 DeoR-like helix-turn-helix domain CDIF29627_RS11325 PF00455 DeoR C terminal sensor domain CDIF29627_RS11335 PF13426 PAS domain CDIF29627_RS11335 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS11335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS11335 PF00672 HAMP domain CDIF29627_RS11340 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS11340 PF00072 Response regulator receiver domain CDIF29627_RS11345 PF00403 Heavy-metal-associated domain CDIF29627_RS11360 PF14492 Elongation Factor G, domain II CDIF29627_RS11360 PF00679 Elongation factor G C-terminus CDIF29627_RS11360 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS11360 PF03144 Elongation factor Tu domain 2 CDIF29627_RS11365 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS11370 PF14821 Threonine synthase N terminus CDIF29627_RS11370 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS11375 PF08544 GHMP kinases C terminal CDIF29627_RS11375 PF00288 GHMP kinases N terminal domain CDIF29627_RS11405 PF00583 Acetyltransferase (GNAT) family CDIF29627_RS11430 PF04551 GcpE protein CDIF29627_RS11435 PF02163 Peptidase family M50 CDIF29627_RS11435 PF17820 PDZ domain CDIF29627_RS11440 PF13288 DXP reductoisomerase C-terminal domain CDIF29627_RS11440 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDIF29627_RS11440 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDIF29627_RS11455 PF00563 EAL domain CDIF29627_RS11455 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS11455 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS11470 PF01255 Putative undecaprenyl diphosphate synthase CDIF29627_RS11480 PF01765 Ribosome recycling factor CDIF29627_RS11485 PF00696 Amino acid kinase family CDIF29627_RS11490 PF00889 Elongation factor TS CDIF29627_RS11495 PF00318 Ribosomal protein S2 CDIF29627_RS11500 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29627_RS11500 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29627_RS11515 PF02659 Putative manganese efflux pump CDIF29627_RS11520 PF00488 MutS domain V CDIF29627_RS11520 PF01713 Smr domain CDIF29627_RS11525 PF01139 tRNA-splicing ligase RtcB CDIF29627_RS11535 PF04294 VanW like protein CDIF29627_RS11555 PF05343 M42 glutamyl aminopeptidase CDIF29627_RS11565 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDIF29627_RS11565 PF01926 50S ribosome-binding GTPase CDIF29627_RS11570 PF04055 Radical SAM superfamily CDIF29627_RS11570 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29627_RS11585 PF00202 Aminotransferase class-III CDIF29627_RS11595 PF04892 VanZ like family CDIF29627_RS11610 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29627_RS11610 PF02272 DHHA1 domain CDIF29627_RS11610 PF01411 tRNA synthetases class II (A) CDIF29627_RS11620 PF00056 lactate/malate dehydrogenase, NAD binding domain CDIF29627_RS11620 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDIF29627_RS11630 PF01641 SelR domain CDIF29627_RS11630 PF01625 Peptide methionine sulfoxide reductase CDIF29627_RS11635 PF01734 Patatin-like phospholipase CDIF29627_RS11640 PF03063 Prismane/CO dehydrogenase family CDIF29627_RS11660 PF13247 4Fe-4S dicluster domain CDIF29627_RS11660 PF12800 4Fe-4S binding domain CDIF29627_RS11665 PF01568 Molydopterin dinucleotide binding domain CDIF29627_RS11665 PF00384 Molybdopterin oxidoreductase CDIF29627_RS11665 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDIF29627_RS11670 PF00271 Helicase conserved C-terminal domain CDIF29627_RS11670 PF00176 SNF2 family N-terminal domain CDIF29627_RS11670 PF04434 SWIM zinc finger CDIF29627_RS11675 PF12697 Alpha/beta hydrolase family CDIF29627_RS11680 PF03880 DbpA RNA binding domain CDIF29627_RS11680 PF00270 DEAD/DEAH box helicase CDIF29627_RS11680 PF00271 Helicase conserved C-terminal domain CDIF29627_RS11705 PF13457 GW (Gly-Tryp) dipeptide domain CDIF29627_RS11705 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29627_RS11710 PF03633 Glycosyl hydrolase family 65, C-terminal domain CDIF29627_RS11710 PF03632 Glycosyl hydrolase family 65 central catalytic domain CDIF29627_RS11710 PF03636 Glycosyl hydrolase family 65, N-terminal domain CDIF29627_RS11715 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS11720 PF16657 Maltogenic Amylase, C-terminal domain CDIF29627_RS11720 PF02903 Alpha amylase, N-terminal ig-like domain CDIF29627_RS11720 PF00128 Alpha amylase, catalytic domain CDIF29627_RS11725 PF02811 PHP domain CDIF29627_RS11735 PF08486 Stage II sporulation protein CDIF29627_RS11735 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS11740 PF00480 ROK family CDIF29627_RS11745 PF00210 Ferritin-like domain CDIF29627_RS11750 PF13607 Succinyl-CoA ligase like flavodoxin domain CDIF29627_RS11750 PF13380 CoA binding domain CDIF29627_RS11765 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29627_RS11765 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29627_RS11765 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29627_RS11775 PF00155 Aminotransferase class I and II CDIF29627_RS11790 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS11795 PF00756 Putative esterase CDIF29627_RS11800 PF01594 AI-2E family transporter CDIF29627_RS11805 PF00171 Aldehyde dehydrogenase family CDIF29627_RS11820 PF16360 GTP-binding GTPase Middle Region CDIF29627_RS11820 PF01926 50S ribosome-binding GTPase CDIF29627_RS11820 PF13167 GTP-binding GTPase N-terminal CDIF29627_RS11825 PF00664 ABC transporter transmembrane region CDIF29627_RS11825 PF00005 ABC transporter CDIF29627_RS11830 PF00005 ABC transporter CDIF29627_RS11830 PF00664 ABC transporter transmembrane region CDIF29627_RS11845 PF00484 Carbonic anhydrase CDIF29627_RS11865 PF01487 Type I 3-dehydroquinase CDIF29627_RS11875 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29627_RS11880 PF04055 Radical SAM superfamily CDIF29627_RS11880 PF01938 TRAM domain CDIF29627_RS11880 PF00919 Uncharacterized protein family UPF0004 CDIF29627_RS11895 PF01226 Formate/nitrite transporter CDIF29627_RS11900 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDIF29627_RS11900 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDIF29627_RS11900 PF13187 4Fe-4S dicluster domain CDIF29627_RS11905 PF00175 Oxidoreductase NAD-binding domain CDIF29627_RS11905 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29627_RS11910 PF17179 4Fe-4S dicluster domain CDIF29627_RS11915 PF00027 Cyclic nucleotide-binding domain CDIF29627_RS11915 PF13545 Crp-like helix-turn-helix domain CDIF29627_RS11920 PF01380 SIS domain CDIF29627_RS11920 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS11925 PF00480 ROK family CDIF29627_RS11940 PF00474 Sodium:solute symporter family CDIF29627_RS11945 PF00701 Dihydrodipicolinate synthetase family CDIF29627_RS11950 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CDIF29627_RS11965 PF00360 Phytochrome region CDIF29627_RS11965 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS11965 PF00563 EAL domain CDIF29627_RS11965 PF01590 GAF domain CDIF29627_RS11970 PF01336 OB-fold nucleic acid binding domain CDIF29627_RS11970 PF00152 tRNA synthetases class II (D, K and N) CDIF29627_RS11980 PF02225 PA domain CDIF29627_RS11980 PF00082 Subtilase family CDIF29627_RS11980 PF05922 Peptidase inhibitor I9 CDIF29627_RS11980 PF13860 FlgD Ig-like domain CDIF29627_RS11985 PF00082 Subtilase family CDIF29627_RS11995 PF01434 Peptidase family M41 CDIF29627_RS11995 PF06480 FtsH Extracellular CDIF29627_RS11995 PF17862 AAA+ lid domain CDIF29627_RS11995 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS12010 PF12544 Lysine-2,3-aminomutase CDIF29627_RS12010 PF04055 Radical SAM superfamily CDIF29627_RS12015 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS12015 PF00155 Aminotransferase class I and II CDIF29627_RS12020 PF01177 Asp/Glu/Hydantoin racemase CDIF29627_RS12040 PF07883 Cupin domain CDIF29627_RS12045 PF00854 POT family CDIF29627_RS12050 PF00557 Metallopeptidase family M24 CDIF29627_RS12050 PF01321 Creatinase/Prolidase N-terminal domain CDIF29627_RS12055 PF00854 POT family CDIF29627_RS12075 PF01266 FAD dependent oxidoreductase CDIF29627_RS12075 PF00355 Rieske [2Fe-2S] domain CDIF29627_RS12080 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS12080 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS12085 PF00294 pfkB family carbohydrate kinase CDIF29627_RS12090 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS12090 PF05043 Mga helix-turn-helix domain CDIF29627_RS12090 PF08279 HTH domain CDIF29627_RS12090 PF00874 PRD domain CDIF29627_RS12095 PF13350 Tyrosine phosphatase family CDIF29627_RS12100 PF01594 AI-2E family transporter CDIF29627_RS12110 PF01131 DNA topoisomerase CDIF29627_RS12110 PF01751 Toprim domain CDIF29627_RS12115 PF01235 Sodium:alanine symporter family CDIF29627_RS12120 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29627_RS12125 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29627_RS12130 PF00107 Zinc-binding dehydrogenase CDIF29627_RS12130 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29627_RS12135 PF03611 PTS system sugar-specific permease component CDIF29627_RS12140 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS12145 PF02378 Phosphotransferase system, EIIC CDIF29627_RS12145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS12145 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS12150 PF00874 PRD domain CDIF29627_RS12150 PF03610 PTS system fructose IIA component CDIF29627_RS12150 PF00158 Sigma-54 interaction domain CDIF29627_RS12160 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS12160 PF00155 Aminotransferase class I and II CDIF29627_RS12165 PF03591 AzlC protein CDIF29627_RS12175 PF16736 Single Cache-like CDIF29627_RS12175 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS12175 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS12175 PF00989 PAS fold CDIF29627_RS12185 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS12185 PF00072 Response regulator receiver domain CDIF29627_RS12220 PF00561 alpha/beta hydrolase fold CDIF29627_RS12225 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS12265 PF04865 Baseplate J-like protein CDIF29627_RS12285 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29627_RS12285 PF00589 Phage integrase family CDIF29627_RS12310 PF01381 Helix-turn-helix CDIF29627_RS12320 PF00313 'Cold-shock' DNA-binding domain CDIF29627_RS12330 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS12335 PF08402 TOBE domain CDIF29627_RS12335 PF00005 ABC transporter CDIF29627_RS12350 PF00072 Response regulator receiver domain CDIF29627_RS12350 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS12355 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS12355 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS12360 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29627_RS12360 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29627_RS12360 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29627_RS12360 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29627_RS12365 PF00834 Ribulose-phosphate 3 epimerase family CDIF29627_RS12370 PF02502 Ribose/Galactose Isomerase CDIF29627_RS12375 PF02779 Transketolase, pyrimidine binding domain CDIF29627_RS12375 PF02780 Transketolase, C-terminal domain CDIF29627_RS12380 PF00456 Transketolase, thiamine diphosphate binding domain CDIF29627_RS12385 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29627_RS12385 PF00107 Zinc-binding dehydrogenase CDIF29627_RS12390 PF00107 Zinc-binding dehydrogenase CDIF29627_RS12390 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29627_RS12395 PF03611 PTS system sugar-specific permease component CDIF29627_RS12400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS12410 PF00158 Sigma-54 interaction domain CDIF29627_RS12410 PF00874 PRD domain CDIF29627_RS12410 PF03610 PTS system fructose IIA component CDIF29627_RS12415 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29627_RS12420 PF00156 Phosphoribosyl transferase domain CDIF29627_RS12425 PF08125 Mannitol dehydrogenase C-terminal domain CDIF29627_RS12425 PF01232 Mannitol dehydrogenase Rossmann domain CDIF29627_RS12430 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS12435 PF00874 PRD domain CDIF29627_RS12435 PF08279 HTH domain CDIF29627_RS12435 PF05043 Mga helix-turn-helix domain CDIF29627_RS12435 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS12435 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS12440 PF02378 Phosphotransferase system, EIIC CDIF29627_RS12440 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS12445 PF00571 CBS domain CDIF29627_RS12445 PF00478 IMP dehydrogenase / GMP reductase domain CDIF29627_RS12450 PF05816 Toxic anion resistance protein (TelA) CDIF29627_RS12460 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS12465 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDIF29627_RS12465 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDIF29627_RS12475 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CDIF29627_RS12475 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CDIF29627_RS12480 PF00171 Aldehyde dehydrogenase family CDIF29627_RS12485 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDIF29627_RS12485 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDIF29627_RS12490 PF06826 Predicted Permease Membrane Region CDIF29627_RS12490 PF02080 TrkA-C domain CDIF29627_RS12490 PF06826 Predicted Permease Membrane Region CDIF29627_RS12490 PF02080 TrkA-C domain CDIF29627_RS12495 PF03466 LysR substrate binding domain CDIF29627_RS12495 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS12505 PF00557 Metallopeptidase family M24 CDIF29627_RS12505 PF01321 Creatinase/Prolidase N-terminal domain CDIF29627_RS12510 PF02504 Fatty acid synthesis protein CDIF29627_RS12515 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDIF29627_RS12530 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29627_RS12535 PF00085 Thioredoxin CDIF29627_RS12540 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS12570 PF00005 ABC transporter CDIF29627_RS12580 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS12620 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDIF29627_RS12620 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDIF29627_RS12625 PF00890 FAD binding domain CDIF29627_RS12630 PF02445 Quinolinate synthetase A protein CDIF29627_RS12635 PF02554 Carbon starvation protein CstA CDIF29627_RS12650 PF01594 AI-2E family transporter CDIF29627_RS12655 PF00293 NUDIX domain CDIF29627_RS12665 PF00871 Acetokinase family CDIF29627_RS12685 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS12685 PF00158 Sigma-54 interaction domain CDIF29627_RS12685 PF13426 PAS domain CDIF29627_RS12690 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS12695 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS12710 PF01070 FMN-dependent dehydrogenase CDIF29627_RS12720 PF05569 BlaR1 peptidase M56 CDIF29627_RS12720 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS12725 PF03965 Penicillinase repressor CDIF29627_RS12735 PF03484 tRNA synthetase B5 domain CDIF29627_RS12735 PF03147 Ferredoxin-fold anticodon binding domain CDIF29627_RS12735 PF01588 Putative tRNA binding domain CDIF29627_RS12735 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDIF29627_RS12735 PF03483 B3/4 domain CDIF29627_RS12740 PF00912 Transglycosylase CDIF29627_RS12745 PF00929 Exonuclease CDIF29627_RS12745 PF02811 PHP domain CDIF29627_RS12745 PF14579 Helix-hairpin-helix motif CDIF29627_RS12745 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29627_RS12745 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29627_RS12765 PF01171 PP-loop family CDIF29627_RS12780 PF05067 Manganese containing catalase CDIF29627_RS12785 PF01476 LysM domain CDIF29627_RS12785 PF08239 Bacterial SH3 domain CDIF29627_RS12785 PF00877 NlpC/P60 family CDIF29627_RS12790 PF00692 dUTPase CDIF29627_RS12795 PF01131 DNA topoisomerase CDIF29627_RS12795 PF01751 Toprim domain CDIF29627_RS12810 PF00873 AcrB/AcrD/AcrF family CDIF29627_RS12825 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDIF29627_RS12825 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29627_RS12825 PF00391 PEP-utilising enzyme, mobile domain CDIF29627_RS12830 PF03618 Kinase/pyrophosphorylase CDIF29627_RS12835 PF00571 CBS domain CDIF29627_RS12835 PF08279 HTH domain CDIF29627_RS12855 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS12855 PF05043 Mga helix-turn-helix domain CDIF29627_RS12855 PF08279 HTH domain CDIF29627_RS12855 PF00874 PRD domain CDIF29627_RS12860 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CDIF29627_RS12860 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CDIF29627_RS12865 PF03608 PTS system enzyme II sorbitol-specific factor CDIF29627_RS12870 PF12833 Helix-turn-helix domain CDIF29627_RS12880 PF07687 Peptidase dimerisation domain CDIF29627_RS12880 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS12885 PF01235 Sodium:alanine symporter family CDIF29627_RS12890 PF07690 Major Facilitator Superfamily CDIF29627_RS12895 PF00155 Aminotransferase class I and II CDIF29627_RS12900 PF01515 Phosphate acetyl/butaryl transferase CDIF29627_RS12905 PF00871 Acetokinase family CDIF29627_RS12920 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29627_RS12920 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29627_RS12920 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29627_RS12930 PF09339 IclR helix-turn-helix domain CDIF29627_RS12930 PF01614 Bacterial transcriptional regulator CDIF29627_RS12940 PF02092 Glycyl-tRNA synthetase beta subunit CDIF29627_RS12940 PF05746 DALR anticodon binding domain CDIF29627_RS12945 PF02091 Glycyl-tRNA synthetase alpha subunit CDIF29627_RS12955 PF02565 Recombination protein O C terminal CDIF29627_RS12955 PF11967 Recombination protein O N terminal CDIF29627_RS12965 PF01769 Divalent cation transporter CDIF29627_RS12965 PF00571 CBS domain CDIF29627_RS12965 PF03448 MgtE intracellular N domain CDIF29627_RS12970 PF01926 50S ribosome-binding GTPase CDIF29627_RS12970 PF07650 KH domain CDIF29627_RS12975 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29627_RS12980 PF01219 Prokaryotic diacylglycerol kinase CDIF29627_RS12985 PF02130 Uncharacterized protein family UPF0054 CDIF29627_RS12990 PF02562 PhoH-like protein CDIF29627_RS13005 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDIF29627_RS13005 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDIF29627_RS13010 PF03073 TspO/MBR family CDIF29627_RS13015 PF09424 Yqey-like protein CDIF29627_RS13020 PF01165 Ribosomal protein S21 CDIF29627_RS13025 PF01230 HIT domain CDIF29627_RS13030 PF00919 Uncharacterized protein family UPF0004 CDIF29627_RS13030 PF01938 TRAM domain CDIF29627_RS13030 PF04055 Radical SAM superfamily CDIF29627_RS13035 PF04452 RNA methyltransferase CDIF29627_RS13045 PF18019 HD domain CDIF29627_RS13045 PF00270 DEAD/DEAH box helicase CDIF29627_RS13045 PF18395 Cas3 C-terminal domain CDIF29627_RS13080 PF00005 ABC transporter CDIF29627_RS13080 PF03459 TOBE domain CDIF29627_RS13080 PF17912 MalK OB fold domain CDIF29627_RS13085 PF13556 PucR C-terminal helix-turn-helix domain CDIF29627_RS13085 PF07905 Purine catabolism regulatory protein-like family CDIF29627_RS13085 PF17853 GGDEF-like domain CDIF29627_RS13090 PF07690 Major Facilitator Superfamily CDIF29627_RS13095 PF00480 ROK family CDIF29627_RS13105 PF00684 DnaJ central domain CDIF29627_RS13105 PF00226 DnaJ domain CDIF29627_RS13105 PF01556 DnaJ C terminal domain CDIF29627_RS13110 PF00012 Hsp70 protein CDIF29627_RS13115 PF01025 GrpE CDIF29627_RS13120 PF01628 HrcA protein C terminal domain CDIF29627_RS13125 PF04055 Radical SAM superfamily CDIF29627_RS13125 PF06969 HemN C-terminal domain CDIF29627_RS13130 PF13520 Amino acid permease CDIF29627_RS13135 PF13735 tRNA nucleotidyltransferase domain 2 putative CDIF29627_RS13135 PF12627 Probable RNA and SrmB- binding site of polymerase A CDIF29627_RS13135 PF01743 Poly A polymerase head domain CDIF29627_RS13140 PF06421 GTP-binding protein LepA C-terminus CDIF29627_RS13140 PF03144 Elongation factor Tu domain 2 CDIF29627_RS13140 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS13140 PF00679 Elongation factor G C-terminus CDIF29627_RS13155 PF03418 Germination protease CDIF29627_RS13175 PF01649 Ribosomal protein S20 CDIF29627_RS13185 PF03772 Competence protein CDIF29627_RS13185 PF13567 Domain of unknown function (DUF4131) CDIF29627_RS13185 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS13205 PF00899 ThiF family CDIF29627_RS13210 PF01476 LysM domain CDIF29627_RS13210 PF06725 3D domain CDIF29627_RS13215 PF03167 Uracil DNA glycosylase superfamily CDIF29627_RS13225 PF02424 ApbE family CDIF29627_RS13230 PF00155 Aminotransferase class I and II CDIF29627_RS13235 PF00557 Metallopeptidase family M24 CDIF29627_RS13235 PF01321 Creatinase/Prolidase N-terminal domain CDIF29627_RS13240 PF02378 Phosphotransferase system, EIIC CDIF29627_RS13245 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS13250 PF00381 PTS HPr component phosphorylation site CDIF29627_RS13250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS13250 PF00391 PEP-utilising enzyme, mobile domain CDIF29627_RS13250 PF05524 PEP-utilising enzyme, N-terminal CDIF29627_RS13250 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29627_RS13255 PF00874 PRD domain CDIF29627_RS13255 PF08279 HTH domain CDIF29627_RS13255 PF05043 Mga helix-turn-helix domain CDIF29627_RS13255 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS13260 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS13265 PF01238 Phosphomannose isomerase type I CDIF29627_RS13270 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS13270 PF18698 Histidine kinase sensor domain CDIF29627_RS13270 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS13270 PF00672 HAMP domain CDIF29627_RS13270 PF00989 PAS fold CDIF29627_RS13275 PF09106 Elongation factor SelB, winged helix CDIF29627_RS13275 PF09105 Elongation factor SelB, winged helix CDIF29627_RS13275 PF03144 Elongation factor Tu domain 2 CDIF29627_RS13275 PF09107 Elongation factor SelB, winged helix CDIF29627_RS13275 PF00009 Elongation factor Tu GTP binding domain CDIF29627_RS13280 PF03841 L-seryl-tRNA selenium transferase CDIF29627_RS13280 PF12390 Selenocysteine synthase N terminal CDIF29627_RS13295 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29627_RS13295 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29627_RS13305 PF14698 Argininosuccinate lyase C-terminal CDIF29627_RS13305 PF00206 Lyase CDIF29627_RS13315 PF00155 Aminotransferase class I and II CDIF29627_RS13320 PF00690 Cation transporter/ATPase, N-terminus CDIF29627_RS13320 PF00689 Cation transporting ATPase, C-terminus CDIF29627_RS13325 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29627_RS13330 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS13335 PF07690 Major Facilitator Superfamily CDIF29627_RS13345 PF12833 Helix-turn-helix domain CDIF29627_RS13345 PF02311 AraC-like ligand binding domain CDIF29627_RS13350 PF02056 Family 4 glycosyl hydrolase CDIF29627_RS13350 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29627_RS13355 PF00367 phosphotransferase system, EIIB CDIF29627_RS13355 PF02378 Phosphotransferase system, EIIC CDIF29627_RS13360 PF03123 CAT RNA binding domain CDIF29627_RS13360 PF00874 PRD domain CDIF29627_RS13365 PF00367 phosphotransferase system, EIIB CDIF29627_RS13365 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS13365 PF02378 Phosphotransferase system, EIIC CDIF29627_RS13370 PF01042 Endoribonuclease L-PSP CDIF29627_RS13375 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS13375 PF13291 ACT domain CDIF29627_RS13380 PF00155 Aminotransferase class I and II CDIF29627_RS13385 PF00710 Asparaginase, N-terminal CDIF29627_RS13385 PF17763 Glutaminase/Asparaginase C-terminal domain CDIF29627_RS13400 PF00313 'Cold-shock' DNA-binding domain CDIF29627_RS13420 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS13470 PF13603 Leucyl-tRNA synthetase, Domain 2 CDIF29627_RS13470 PF09334 tRNA synthetases class I (M) CDIF29627_RS13470 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29627_RS13470 PF08264 Anticodon-binding domain of tRNA CDIF29627_RS13480 PF01966 HD domain CDIF29627_RS13485 PF01467 Cytidylyltransferase-like CDIF29627_RS13490 PF02631 RecX family CDIF29627_RS13495 PF02806 Alpha amylase, C-terminal all-beta domain CDIF29627_RS13495 PF00128 Alpha amylase, catalytic domain CDIF29627_RS13495 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDIF29627_RS13500 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS13500 PF17932 Tetracyclin repressor-like, C-terminal domain CDIF29627_RS13525 PF00266 Aminotransferase class-V CDIF29627_RS13535 PF12704 MacB-like periplasmic core domain CDIF29627_RS13535 PF00005 ABC transporter CDIF29627_RS13535 PF02687 FtsX-like permease family CDIF29627_RS13540 PF18698 Histidine kinase sensor domain CDIF29627_RS13540 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS13540 PF00672 HAMP domain CDIF29627_RS13540 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS13545 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS13545 PF00072 Response regulator receiver domain CDIF29627_RS13550 PF00149 Calcineurin-like phosphoesterase CDIF29627_RS13550 PF02872 5'-nucleotidase, C-terminal domain CDIF29627_RS13560 PF12706 Beta-lactamase superfamily domain CDIF29627_RS13565 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29627_RS13565 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS13570 PF00375 Sodium:dicarboxylate symporter family CDIF29627_RS13580 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29627_RS13595 PF03425 Carbohydrate binding domain (family 11) CDIF29627_RS13595 PF00404 Dockerin type I domain CDIF29627_RS13595 PF02156 Glycosyl hydrolase family 26 CDIF29627_RS13595 PF00150 Cellulase (glycosyl hydrolase family 5) CDIF29627_RS13605 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS13610 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS13625 PF13580 SIS domain CDIF29627_RS13630 PF03611 PTS system sugar-specific permease component CDIF29627_RS13635 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS13640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS13650 PF01467 Cytidylyltransferase-like CDIF29627_RS13660 PF00270 DEAD/DEAH box helicase CDIF29627_RS13660 PF00271 Helicase conserved C-terminal domain CDIF29627_RS13660 PF17191 RecG wedge domain CDIF29627_RS13665 PF13684 Dihydroxyacetone kinase family CDIF29627_RS13665 PF02734 DAK2 domain CDIF29627_RS13670 PF03780 Asp23 family, cell envelope-related function CDIF29627_RS13675 PF00830 Ribosomal L28 family CDIF29627_RS13690 PF07739 TipAS antibiotic-recognition domain CDIF29627_RS13690 PF13411 MerR HTH family regulatory protein CDIF29627_RS13695 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS13695 PF08279 HTH domain CDIF29627_RS13695 PF05043 Mga helix-turn-helix domain CDIF29627_RS13695 PF00874 PRD domain CDIF29627_RS13700 PF00874 PRD domain CDIF29627_RS13700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS13700 PF05043 Mga helix-turn-helix domain CDIF29627_RS13700 PF08279 HTH domain CDIF29627_RS13705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS13705 PF02378 Phosphotransferase system, EIIC CDIF29627_RS13705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS13715 PF09261 Alpha mannosidase middle domain CDIF29627_RS13715 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29627_RS13715 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29627_RS13720 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS13720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS13725 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS13725 PF00072 Response regulator receiver domain CDIF29627_RS13740 PF04263 Thiamin pyrophosphokinase, catalytic domain CDIF29627_RS13740 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CDIF29627_RS13745 PF00834 Ribulose-phosphate 3 epimerase family CDIF29627_RS13750 PF03193 RsgA GTPase CDIF29627_RS13750 PF16745 RsgA N-terminal domain CDIF29627_RS13760 PF00069 Protein kinase domain CDIF29627_RS13760 PF03793 PASTA domain CDIF29627_RS13770 PF04055 Radical SAM superfamily CDIF29627_RS13775 PF01029 NusB family CDIF29627_RS13775 PF01189 16S rRNA methyltransferase RsmB/F CDIF29627_RS13780 PF04298 Putative neutral zinc metallopeptidase CDIF29627_RS13790 PF02911 Formyl transferase, C-terminal domain CDIF29627_RS13790 PF00551 Formyl transferase CDIF29627_RS13795 PF01327 Polypeptide deformylase CDIF29627_RS13800 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDIF29627_RS13800 PF17764 3′ DNA-binding domain (3′BD) CDIF29627_RS13800 PF00271 Helicase conserved C-terminal domain CDIF29627_RS13800 PF04851 Type III restriction enzyme, res subunit CDIF29627_RS13800 PF18074 Primosomal protein N C-terminal domain CDIF29627_RS13805 PF02441 Flavoprotein CDIF29627_RS13805 PF04127 DNA / pantothenate metabolism flavoprotein CDIF29627_RS13810 PF01192 RNA polymerase Rpb6 CDIF29627_RS13815 PF00625 Guanylate kinase CDIF29627_RS13820 PF03755 YicC-like family, N-terminal region CDIF29627_RS13820 PF08340 Domain of unknown function (DUF1732) CDIF29627_RS13825 PF01678 Diaminopimelate epimerase CDIF29627_RS13830 PF01212 Beta-eliminating lyase CDIF29627_RS13835 PF05670 NFACT protein RNA binding domain CDIF29627_RS13840 PF00005 ABC transporter CDIF29627_RS13840 PF12848 ABC transporter CDIF29627_RS13840 PF16326 ABC transporter C-terminal domain CDIF29627_RS13845 PF00860 Permease family CDIF29627_RS13850 PF00156 Phosphoribosyl transferase domain CDIF29627_RS13855 PF00849 RNA pseudouridylate synthase CDIF29627_RS13855 PF01479 S4 domain CDIF29627_RS13860 PF01252 Signal peptidase (SPase) II CDIF29627_RS13865 PF01522 Polysaccharide deacetylase CDIF29627_RS13870 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDIF29627_RS13880 PF13276 HTH-like domain CDIF29627_RS13880 PF00665 Integrase core domain CDIF29627_RS13880 PF13333 Integrase core domain CDIF29627_RS13885 PF02554 Carbon starvation protein CstA CDIF29627_RS13890 PF04397 LytTr DNA-binding domain CDIF29627_RS13890 PF00072 Response regulator receiver domain CDIF29627_RS13895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS13895 PF07694 5TMR of 5TMR-LYT CDIF29627_RS13895 PF06580 Histidine kinase CDIF29627_RS13900 PF00579 tRNA synthetases class I (W and Y) CDIF29627_RS13905 PF01048 Phosphorylase superfamily CDIF29627_RS13910 PF13520 Amino acid permease CDIF29627_RS13915 PF01321 Creatinase/Prolidase N-terminal domain CDIF29627_RS13915 PF00557 Metallopeptidase family M24 CDIF29627_RS13920 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29627_RS13925 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS13925 PF08360 QacR-like protein, C-terminal region CDIF29627_RS13935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29627_RS13935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29627_RS13940 PF08264 Anticodon-binding domain of tRNA CDIF29627_RS13940 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29627_RS13945 PF05103 DivIVA protein CDIF29627_RS13960 PF04472 Cell division protein SepF CDIF29627_RS13965 PF01168 Alanine racemase, N-terminal domain CDIF29627_RS13980 PF05167 Uncharacterised ACR (DUF711) CDIF29627_RS13995 PF09547 Stage IV sporulation protein A (spore_IV_A) CDIF29627_RS14000 PF07690 Major Facilitator Superfamily CDIF29627_RS14005 PF13520 Amino acid permease CDIF29627_RS14010 PF00557 Metallopeptidase family M24 CDIF29627_RS14010 PF01321 Creatinase/Prolidase N-terminal domain CDIF29627_RS14015 PF00440 Bacterial regulatory proteins, tetR family CDIF29627_RS14020 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDIF29627_RS14020 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDIF29627_RS14025 PF02660 Glycerol-3-phosphate acyltransferase CDIF29627_RS14030 PF01926 50S ribosome-binding GTPase CDIF29627_RS14030 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDIF29627_RS14045 PF14045 YIEGIA protein CDIF29627_RS14050 PF14045 YIEGIA protein CDIF29627_RS14055 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS14055 PF16736 Single Cache-like CDIF29627_RS14055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS14055 PF00989 PAS fold CDIF29627_RS14060 PF00072 Response regulator receiver domain CDIF29627_RS14060 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS14065 PF02578 Multi-copper polyphenol oxidoreductase laccase CDIF29627_RS14070 PF03477 ATP cone domain CDIF29627_RS14075 PF05239 PRC-barrel domain CDIF29627_RS14080 PF04545 Sigma-70, region 4 CDIF29627_RS14080 PF04542 Sigma-70 region 2 CDIF29627_RS14080 PF04539 Sigma-70 region 3 CDIF29627_RS14085 PF04542 Sigma-70 region 2 CDIF29627_RS14085 PF04545 Sigma-70, region 4 CDIF29627_RS14090 PF03419 Sporulation factor SpoIIGA CDIF29627_RS14100 PF12327 FtsZ family, C-terminal domain CDIF29627_RS14100 PF00091 Tubulin/FtsZ family, GTPase domain CDIF29627_RS14105 PF06947 Protein of unknown function (DUF1290) CDIF29627_RS14120 PF08478 POTRA domain, FtsQ-type CDIF29627_RS14120 PF03799 Cell division protein FtsQ CDIF29627_RS14125 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29627_RS14125 PF03033 Glycosyltransferase family 28 N-terminal domain CDIF29627_RS14130 PF01098 Cell cycle protein CDIF29627_RS14135 PF08245 Mur ligase middle domain CDIF29627_RS14135 PF02875 Mur ligase family, glutamate ligase domain CDIF29627_RS14140 PF00953 Glycosyl transferase family 4 CDIF29627_RS14140 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDIF29627_RS14145 PF01225 Mur ligase family, catalytic domain CDIF29627_RS14145 PF08245 Mur ligase middle domain CDIF29627_RS14145 PF02875 Mur ligase family, glutamate ligase domain CDIF29627_RS14150 PF00905 Penicillin binding protein transpeptidase domain CDIF29627_RS14150 PF03717 Penicillin-binding Protein dimerisation domain CDIF29627_RS14150 PF03793 PASTA domain CDIF29627_RS14160 PF01795 MraW methylase family CDIF29627_RS14165 PF01790 Prolipoprotein diacylglyceryl transferase CDIF29627_RS14170 PF00675 Insulinase (Peptidase family M16) CDIF29627_RS14170 PF05193 Peptidase M16 inactive domain CDIF29627_RS14180 PF06071 Protein of unknown function (DUF933) CDIF29627_RS14180 PF01926 50S ribosome-binding GTPase CDIF29627_RS14190 PF00563 EAL domain CDIF29627_RS14190 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS14190 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS14195 PF01225 Mur ligase family, catalytic domain CDIF29627_RS14195 PF02875 Mur ligase family, glutamate ligase domain CDIF29627_RS14195 PF08245 Mur ligase middle domain CDIF29627_RS14200 PF12833 Helix-turn-helix domain CDIF29627_RS14205 PF02378 Phosphotransferase system, EIIC CDIF29627_RS14205 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS14205 PF00367 phosphotransferase system, EIIB CDIF29627_RS14210 PF00874 PRD domain CDIF29627_RS14210 PF03123 CAT RNA binding domain CDIF29627_RS14215 PF00999 Sodium/hydrogen exchanger family CDIF29627_RS14220 PF00005 ABC transporter CDIF29627_RS14220 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29627_RS14225 PF00005 ABC transporter CDIF29627_RS14225 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29627_RS14230 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29627_RS14235 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS14240 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS14240 PF12911 N-terminal TM domain of oligopeptide transport permease C CDIF29627_RS14245 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS14245 PF03466 LysR substrate binding domain CDIF29627_RS14250 PF02803 Thiolase, C-terminal domain CDIF29627_RS14250 PF00108 Thiolase, N-terminal domain CDIF29627_RS14255 PF01144 Coenzyme A transferase CDIF29627_RS14260 PF01144 Coenzyme A transferase CDIF29627_RS14275 PF00188 Cysteine-rich secretory protein family CDIF29627_RS14285 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29627_RS14285 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29627_RS14285 PF10371 Domain of unknown function CDIF29627_RS14285 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29627_RS14285 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDIF29627_RS14290 PF06130 Phosphate propanoyltransferase CDIF29627_RS14320 PF00269 Small, acid-soluble spore proteins, alpha/beta type CDIF29627_RS14330 PF01569 PAP2 superfamily CDIF29627_RS14335 PF00156 Phosphoribosyl transferase domain CDIF29627_RS14340 PF00155 Aminotransferase class I and II CDIF29627_RS14355 PF03590 Aspartate-ammonia ligase CDIF29627_RS14360 PF00155 Aminotransferase class I and II CDIF29627_RS14365 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS14365 PF07687 Peptidase dimerisation domain CDIF29627_RS14375 PF07670 Nucleoside recognition CDIF29627_RS14380 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS14380 PF13426 PAS domain CDIF29627_RS14380 PF00158 Sigma-54 interaction domain CDIF29627_RS14390 PF05525 Branched-chain amino acid transport protein CDIF29627_RS14400 PF00860 Permease family CDIF29627_RS14405 PF01979 Amidohydrolase family CDIF29627_RS14415 PF07690 Major Facilitator Superfamily CDIF29627_RS14420 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDIF29627_RS14420 PF08501 Shikimate dehydrogenase substrate binding domain CDIF29627_RS14425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS14425 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29627_RS14435 PF03466 LysR substrate binding domain CDIF29627_RS14435 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS14445 PF03734 L,D-transpeptidase catalytic domain CDIF29627_RS14445 PF01476 LysM domain CDIF29627_RS14450 PF16363 GDP-mannose 4,6 dehydratase CDIF29627_RS14455 PF00483 Nucleotidyl transferase CDIF29627_RS14480 PF04203 Sortase domain CDIF29627_RS14500 PF01522 Polysaccharide deacetylase CDIF29627_RS14510 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS14515 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS14515 PF00072 Response regulator receiver domain CDIF29627_RS14525 PF01522 Polysaccharide deacetylase CDIF29627_RS14530 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29627_RS14530 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29627_RS14535 PF00464 Serine hydroxymethyltransferase CDIF29627_RS14555 PF02583 Metal-sensitive transcriptional repressor CDIF29627_RS14565 PF00158 Sigma-54 interaction domain CDIF29627_RS14565 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS14565 PF13426 PAS domain CDIF29627_RS14570 PF00155 Aminotransferase class I and II CDIF29627_RS14575 PF03553 Na+/H+ antiporter family CDIF29627_RS14585 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14585 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS14590 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS14590 PF03466 LysR substrate binding domain CDIF29627_RS14595 PF00795 Carbon-nitrogen hydrolase CDIF29627_RS14605 PF02938 GAD domain CDIF29627_RS14605 PF00152 tRNA synthetases class II (D, K and N) CDIF29627_RS14605 PF01336 OB-fold nucleic acid binding domain CDIF29627_RS14610 PF13393 Histidyl-tRNA synthetase CDIF29627_RS14610 PF03129 Anticodon binding domain CDIF29627_RS14615 PF04055 Radical SAM superfamily CDIF29627_RS14620 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS14625 PF02580 D-Tyr-tRNA(Tyr) deacylase CDIF29627_RS14630 PF13291 ACT domain CDIF29627_RS14630 PF02824 TGS domain CDIF29627_RS14630 PF04607 Region found in RelA / SpoT proteins CDIF29627_RS14635 PF00156 Phosphoribosyl transferase domain CDIF29627_RS14640 PF01368 DHH family CDIF29627_RS14640 PF02272 DHHA1 domain CDIF29627_RS14640 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDIF29627_RS14640 PF17768 RecJ OB domain CDIF29627_RS14645 PF03109 ABC1 family CDIF29627_RS14650 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29627_RS14680 PF00391 PEP-utilising enzyme, mobile domain CDIF29627_RS14680 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29627_RS14680 PF05524 PEP-utilising enzyme, N-terminal CDIF29627_RS14685 PF00381 PTS HPr component phosphorylation site CDIF29627_RS14695 PF12950 TaqI-like C-terminal specificity domain CDIF29627_RS14695 PF07669 Eco57I restriction-modification methylase CDIF29627_RS14705 PF00563 EAL domain CDIF29627_RS14705 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS14705 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS14710 PF08239 Bacterial SH3 domain CDIF29627_RS14710 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14715 PF01255 Putative undecaprenyl diphosphate synthase CDIF29627_RS14730 PF03816 Cell envelope-related transcriptional attenuator domain CDIF29627_RS14735 PF03816 Cell envelope-related transcriptional attenuator domain CDIF29627_RS14740 PF02638 Glycosyl hydrolase-like 10 CDIF29627_RS14745 PF00877 NlpC/P60 family CDIF29627_RS14750 PF02719 Polysaccharide biosynthesis protein CDIF29627_RS14755 PF13439 Glycosyltransferase Family 4 CDIF29627_RS14755 PF00534 Glycosyl transferases group 1 CDIF29627_RS14760 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDIF29627_RS14760 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDIF29627_RS14760 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDIF29627_RS14765 PF00535 Glycosyl transferase family 2 CDIF29627_RS14770 PF00535 Glycosyl transferase family 2 CDIF29627_RS14775 PF00535 Glycosyl transferase family 2 CDIF29627_RS14780 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CDIF29627_RS14780 PF00535 Glycosyl transferase family 2 CDIF29627_RS14785 PF00535 Glycosyl transferase family 2 CDIF29627_RS14800 PF01050 Mannose-6-phosphate isomerase CDIF29627_RS14800 PF00483 Nucleotidyl transferase CDIF29627_RS14805 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29627_RS14805 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29627_RS14805 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29627_RS14805 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29627_RS14810 PF03023 Lipid II flippase MurJ CDIF29627_RS14815 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14815 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS14820 PF02397 Bacterial sugar transferase CDIF29627_RS14825 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14825 PF08239 Bacterial SH3 domain CDIF29627_RS14835 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14835 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS14845 PF04138 GtrA-like protein CDIF29627_RS14850 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14850 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS14865 PF07516 SecA Wing and Scaffold domain CDIF29627_RS14865 PF01043 SecA preprotein cross-linking domain CDIF29627_RS14865 PF07517 SecA DEAD-like domain CDIF29627_RS14900 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS14900 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS14915 PF02699 Preprotein translocase subunit CDIF29627_RS14920 PF01702 Queuine tRNA-ribosyltransferase CDIF29627_RS14930 PF02547 Queuosine biosynthesis protein CDIF29627_RS14935 PF05491 RuvB C-terminal winged helix domain CDIF29627_RS14935 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDIF29627_RS14935 PF17864 RuvB AAA lid domain CDIF29627_RS14940 PF01330 RuvA N terminal domain CDIF29627_RS14940 PF07499 RuvA, C-terminal domain CDIF29627_RS14945 PF02075 Crossover junction endodeoxyribonuclease RuvC CDIF29627_RS14970 PF02447 GntP family permease CDIF29627_RS14975 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDIF29627_RS14975 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDIF29627_RS14980 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS14980 PF07729 FCD domain CDIF29627_RS14995 PF00664 ABC transporter transmembrane region CDIF29627_RS14995 PF00005 ABC transporter CDIF29627_RS15000 PF00664 ABC transporter transmembrane region CDIF29627_RS15000 PF00005 ABC transporter CDIF29627_RS15015 PF07670 Nucleoside recognition CDIF29627_RS15020 PF07670 Nucleoside recognition CDIF29627_RS15025 PF07687 Peptidase dimerisation domain CDIF29627_RS15025 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS15045 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29627_RS15045 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS15055 PF00155 Aminotransferase class I and II CDIF29627_RS15060 PF00892 EamA-like transporter family CDIF29627_RS15065 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CDIF29627_RS15075 PF16916 Dimerisation domain of Zinc Transporter CDIF29627_RS15075 PF01545 Cation efflux family CDIF29627_RS15080 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS15080 PF00155 Aminotransferase class I and II CDIF29627_RS15085 PF00282 Pyridoxal-dependent decarboxylase conserved domain CDIF29627_RS15090 PF00689 Cation transporting ATPase, C-terminus CDIF29627_RS15090 PF00690 Cation transporter/ATPase, N-terminus CDIF29627_RS15095 PF00464 Serine hydroxymethyltransferase CDIF29627_RS15100 PF03806 AbgT putative transporter family CDIF29627_RS15105 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS15105 PF07687 Peptidase dimerisation domain CDIF29627_RS15115 PF08769 Sporulation initiation factor Spo0A C terminal CDIF29627_RS15115 PF00072 Response regulator receiver domain CDIF29627_RS15125 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29627_RS15125 PF02403 Seryl-tRNA synthetase N-terminal domain CDIF29627_RS15130 PF07969 Amidohydrolase family CDIF29627_RS15135 PF00795 Carbon-nitrogen hydrolase CDIF29627_RS15140 PF00107 Zinc-binding dehydrogenase CDIF29627_RS15140 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29627_RS15150 PF02915 Rubrerythrin CDIF29627_RS15155 PF13171 Protein of unknown function (DUF4004) CDIF29627_RS15170 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS15170 PF00266 Aminotransferase class-V CDIF29627_RS15175 PF08220 DeoR-like helix-turn-helix domain CDIF29627_RS15175 PF00455 DeoR C terminal sensor domain CDIF29627_RS15180 PF00550 Phosphopantetheine attachment site CDIF29627_RS15185 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29627_RS15190 PF00501 AMP-binding enzyme CDIF29627_RS15190 PF13193 AMP-binding enzyme C-terminal domain CDIF29627_RS15200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDIF29627_RS15200 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDIF29627_RS15210 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS15215 PF00571 CBS domain CDIF29627_RS15215 PF03471 Transporter associated domain CDIF29627_RS15215 PF01595 Cyclin M transmembrane N-terminal domain CDIF29627_RS15220 PF07969 Amidohydrolase family CDIF29627_RS15240 PF00989 PAS fold CDIF29627_RS15240 PF00158 Sigma-54 interaction domain CDIF29627_RS15240 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS15245 PF00561 alpha/beta hydrolase fold CDIF29627_RS15245 PF08386 TAP-like protein CDIF29627_RS15255 PF01523 Putative modulator of DNA gyrase CDIF29627_RS15260 PF01523 Putative modulator of DNA gyrase CDIF29627_RS15265 PF01266 FAD dependent oxidoreductase CDIF29627_RS15270 PF00158 Sigma-54 interaction domain CDIF29627_RS15270 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS15270 PF13426 PAS domain CDIF29627_RS15275 PF03812 2-keto-3-deoxygluconate permease CDIF29627_RS15285 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDIF29627_RS15290 PF00563 EAL domain CDIF29627_RS15290 PF01590 GAF domain CDIF29627_RS15290 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS15290 PF00360 Phytochrome region CDIF29627_RS15295 PF01554 MatE CDIF29627_RS15300 PF00005 ABC transporter CDIF29627_RS15305 PF01032 FecCD transport family CDIF29627_RS15310 PF01032 FecCD transport family CDIF29627_RS15325 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29627_RS15330 PF04794 YdjC-like protein CDIF29627_RS15335 PF02056 Family 4 glycosyl hydrolase CDIF29627_RS15335 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29627_RS15340 PF02378 Phosphotransferase system, EIIC CDIF29627_RS15345 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS15350 PF07702 UTRA domain CDIF29627_RS15350 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS15355 PF01554 MatE CDIF29627_RS15360 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS15365 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS15370 PF00005 ABC transporter CDIF29627_RS15370 PF08402 TOBE domain CDIF29627_RS15380 PF01813 ATP synthase subunit D CDIF29627_RS15385 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29627_RS15385 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS15390 PF16886 ATPsynthase alpha/beta subunit N-term extension CDIF29627_RS15390 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29627_RS15390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS15395 PF01990 ATP synthase (F/14-kDa) subunit CDIF29627_RS15405 PF01991 ATP synthase (E/31 kDa) subunit CDIF29627_RS15410 PF00137 ATP synthase subunit C CDIF29627_RS15415 PF01496 V-type ATPase 116kDa subunit family CDIF29627_RS15440 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS15440 PF00563 EAL domain CDIF29627_RS15440 PF03707 Bacterial signalling protein N terminal repeat CDIF29627_RS15445 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS15445 PF00171 Aldehyde dehydrogenase family CDIF29627_RS15455 PF13333 Integrase core domain CDIF29627_RS15455 PF00665 Integrase core domain CDIF29627_RS15455 PF13276 HTH-like domain CDIF29627_RS15465 PF02441 Flavoprotein CDIF29627_RS15475 PF00501 AMP-binding enzyme CDIF29627_RS15475 PF13193 AMP-binding enzyme C-terminal domain CDIF29627_RS15480 PF00108 Thiolase, N-terminal domain CDIF29627_RS15480 PF02803 Thiolase, C-terminal domain CDIF29627_RS15490 PF07282 Putative transposase DNA-binding domain CDIF29627_RS15490 PF12323 Helix-turn-helix domain CDIF29627_RS15490 PF01385 Probable transposase CDIF29627_RS15520 PF02687 FtsX-like permease family CDIF29627_RS15525 PF00005 ABC transporter CDIF29627_RS15530 PF02673 Bacitracin resistance protein BacA CDIF29627_RS15535 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS15540 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS15540 PF00072 Response regulator receiver domain CDIF29627_RS15550 PF00005 ABC transporter CDIF29627_RS15555 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS15570 PF00268 Ribonucleotide reductase, small chain CDIF29627_RS15575 PF00317 Ribonucleotide reductase, all-alpha domain CDIF29627_RS15575 PF08343 Ribonucleotide reductase N-terminal CDIF29627_RS15575 PF02867 Ribonucleotide reductase, barrel domain CDIF29627_RS15585 PF00005 ABC transporter CDIF29627_RS15590 PF01032 FecCD transport family CDIF29627_RS15600 PF00701 Dihydrodipicolinate synthetase family CDIF29627_RS15605 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDIF29627_RS15610 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDIF29627_RS15610 PF08666 SAF domain CDIF29627_RS15620 PF03812 2-keto-3-deoxygluconate permease CDIF29627_RS15630 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS15635 PF03734 L,D-transpeptidase catalytic domain CDIF29627_RS15650 PF13276 HTH-like domain CDIF29627_RS15650 PF13333 Integrase core domain CDIF29627_RS15650 PF00665 Integrase core domain CDIF29627_RS15655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29627_RS15655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS15660 PF02683 Cytochrome C biogenesis protein transmembrane region CDIF29627_RS15665 PF01638 HxlR-like helix-turn-helix CDIF29627_RS15685 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29627_RS15685 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29627_RS15685 PF09261 Alpha mannosidase middle domain CDIF29627_RS15695 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS15700 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS15700 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS15705 PF05043 Mga helix-turn-helix domain CDIF29627_RS15705 PF08279 HTH domain CDIF29627_RS15705 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS15705 PF00874 PRD domain CDIF29627_RS15710 PF06800 Sugar transport protein CDIF29627_RS15740 PF08331 Domain of unknown function (DUF1730) CDIF29627_RS15750 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS15755 PF00571 CBS domain CDIF29627_RS15755 PF01380 SIS domain CDIF29627_RS15760 PF00155 Aminotransferase class I and II CDIF29627_RS15765 PF00367 phosphotransferase system, EIIB CDIF29627_RS15765 PF02378 Phosphotransferase system, EIIC CDIF29627_RS15770 PF03123 CAT RNA binding domain CDIF29627_RS15770 PF00874 PRD domain CDIF29627_RS15775 PF00266 Aminotransferase class-V CDIF29627_RS15780 PF00085 Thioredoxin CDIF29627_RS15790 PF02567 Phenazine biosynthesis-like protein CDIF29627_RS15795 PF00854 POT family CDIF29627_RS15810 PF17871 AAA lid domain CDIF29627_RS15810 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29627_RS15810 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29627_RS15810 PF07724 AAA domain (Cdc48 subfamily) CDIF29627_RS15810 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS15820 PF00561 alpha/beta hydrolase fold CDIF29627_RS15835 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS15835 PF01380 SIS domain CDIF29627_RS15840 PF12323 Helix-turn-helix domain CDIF29627_RS15840 PF01385 Probable transposase CDIF29627_RS15840 PF07282 Putative transposase DNA-binding domain CDIF29627_RS15855 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29627_RS15860 PF13580 SIS domain CDIF29627_RS15870 PF02378 Phosphotransferase system, EIIC CDIF29627_RS15885 PF03702 Anhydro-N-acetylmuramic acid kinase CDIF29627_RS15890 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS15895 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS15895 PF00072 Response regulator receiver domain CDIF29627_RS15905 PF00005 ABC transporter CDIF29627_RS15915 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS15925 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29627_RS15925 PF02056 Family 4 glycosyl hydrolase CDIF29627_RS15930 PF02378 Phosphotransferase system, EIIC CDIF29627_RS15930 PF00367 phosphotransferase system, EIIB CDIF29627_RS15945 PF01261 Xylose isomerase-like TIM barrel CDIF29627_RS15950 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29627_RS15950 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29627_RS15955 PF00480 ROK family CDIF29627_RS15965 PF03610 PTS system fructose IIA component CDIF29627_RS15965 PF03830 PTS system sorbose subfamily IIB component CDIF29627_RS15970 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29627_RS15975 PF03609 PTS system sorbose-specific iic component CDIF29627_RS15980 PF01055 Glycosyl hydrolases family 31 CDIF29627_RS16000 PF04851 Type III restriction enzyme, res subunit CDIF29627_RS16000 PF08463 EcoEI R protein C-terminal CDIF29627_RS16000 PF00271 Helicase conserved C-terminal domain CDIF29627_RS16000 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CDIF29627_RS16025 PF02384 N-6 DNA Methylase CDIF29627_RS16030 PF01116 Fructose-bisphosphate aldolase class-II CDIF29627_RS16035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS16035 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16040 PF00294 pfkB family carbohydrate kinase CDIF29627_RS16050 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS16060 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16070 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS16070 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16070 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16075 PF02595 Glycerate kinase family CDIF29627_RS16080 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29627_RS16080 PF09261 Alpha mannosidase middle domain CDIF29627_RS16080 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29627_RS16085 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16085 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16085 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS16090 PF01380 SIS domain CDIF29627_RS16090 PF01418 Helix-turn-helix domain, rpiR family CDIF29627_RS16095 PF04794 YdjC-like protein CDIF29627_RS16100 PF00367 phosphotransferase system, EIIB CDIF29627_RS16100 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16100 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS16105 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS16105 PF07702 UTRA domain CDIF29627_RS16110 PF16657 Maltogenic Amylase, C-terminal domain CDIF29627_RS16110 PF00128 Alpha amylase, catalytic domain CDIF29627_RS16115 PF13520 Amino acid permease CDIF29627_RS16120 PF07722 Peptidase C26 CDIF29627_RS16125 PF13426 PAS domain CDIF29627_RS16125 PF00158 Sigma-54 interaction domain CDIF29627_RS16125 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS16135 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS16140 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS16140 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16140 PF00367 phosphotransferase system, EIIB CDIF29627_RS16145 PF00874 PRD domain CDIF29627_RS16145 PF03123 CAT RNA binding domain CDIF29627_RS16155 PF03606 C4-dicarboxylate anaerobic carrier CDIF29627_RS16160 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16160 PF00367 phosphotransferase system, EIIB CDIF29627_RS16165 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS16170 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS16180 PF00465 Iron-containing alcohol dehydrogenase CDIF29627_RS16185 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29627_RS16190 PF08279 HTH domain CDIF29627_RS16190 PF05043 Mga helix-turn-helix domain CDIF29627_RS16190 PF00874 PRD domain CDIF29627_RS16190 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16195 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29627_RS16195 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29627_RS16200 PF00834 Ribulose-phosphate 3 epimerase family CDIF29627_RS16205 PF00365 Phosphofructokinase CDIF29627_RS16215 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS16215 PF07687 Peptidase dimerisation domain CDIF29627_RS16220 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS16230 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS16235 PF00367 phosphotransferase system, EIIB CDIF29627_RS16235 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS16235 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16250 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CDIF29627_RS16255 PF01381 Helix-turn-helix CDIF29627_RS16260 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS16260 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29627_RS16265 PF07690 Major Facilitator Superfamily CDIF29627_RS16270 PF10400 Virulence activator alpha C-term CDIF29627_RS16270 PF03551 Transcriptional regulator PadR-like family CDIF29627_RS16280 PF01022 Bacterial regulatory protein, arsR family CDIF29627_RS16285 PF00881 Nitroreductase family CDIF29627_RS16290 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS16295 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16295 PF00367 phosphotransferase system, EIIB CDIF29627_RS16295 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS16300 PF00874 PRD domain CDIF29627_RS16300 PF03123 CAT RNA binding domain CDIF29627_RS16305 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16305 PF00367 phosphotransferase system, EIIB CDIF29627_RS16310 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS16315 PF03633 Glycosyl hydrolase family 65, C-terminal domain CDIF29627_RS16315 PF03632 Glycosyl hydrolase family 65 central catalytic domain CDIF29627_RS16315 PF03636 Glycosyl hydrolase family 65, N-terminal domain CDIF29627_RS16320 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS16325 PF12833 Helix-turn-helix domain CDIF29627_RS16330 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS16330 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16330 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS16335 PF00874 PRD domain CDIF29627_RS16335 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16335 PF05043 Mga helix-turn-helix domain CDIF29627_RS16335 PF08279 HTH domain CDIF29627_RS16340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29627_RS16340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS16345 PF01116 Fructose-bisphosphate aldolase class-II CDIF29627_RS16350 PF00232 Glycosyl hydrolase family 1 CDIF29627_RS16355 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29627_RS16355 PF02378 Phosphotransferase system, EIIC CDIF29627_RS16355 PF00367 phosphotransferase system, EIIB CDIF29627_RS16360 PF03123 CAT RNA binding domain CDIF29627_RS16360 PF00874 PRD domain CDIF29627_RS16385 PF01965 DJ-1/PfpI family CDIF29627_RS16400 PF04203 Sortase domain CDIF29627_RS16410 PF00005 ABC transporter CDIF29627_RS16415 PF00005 ABC transporter CDIF29627_RS16415 PF12704 MacB-like periplasmic core domain CDIF29627_RS16415 PF02687 FtsX-like permease family CDIF29627_RS16540 PF04002 RadC-like JAB domain CDIF29627_RS16575 PF02384 N-6 DNA Methylase CDIF29627_RS16585 PF05257 CHAP domain CDIF29627_RS16585 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS16585 PF08460 Bacterial SH3 domain CDIF29627_RS16630 PF04865 Baseplate J-like protein CDIF29627_RS16645 PF00877 NlpC/P60 family CDIF29627_RS16650 PF01476 LysM domain CDIF29627_RS16700 PF00574 Clp protease CDIF29627_RS16730 PF00589 Phage integrase family CDIF29627_RS16730 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29627_RS16760 PF03796 DnaB-like helicase C terminal domain CDIF29627_RS16760 PF00772 DnaB-like helicase N terminal domain CDIF29627_RS16780 PF01381 Helix-turn-helix CDIF29627_RS16785 PF01381 Helix-turn-helix CDIF29627_RS16800 PF00589 Phage integrase family CDIF29627_RS16800 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29627_RS16810 PF01668 SmpB protein CDIF29627_RS16835 PF00005 ABC transporter CDIF29627_RS16835 PF13732 Domain of unknown function (DUF4162) CDIF29627_RS16845 PF08206 Ribonuclease B OB domain CDIF29627_RS16845 PF17876 Cold shock domain CDIF29627_RS16845 PF00773 RNB domain CDIF29627_RS16845 PF00575 S1 RNA binding domain CDIF29627_RS16860 PF01161 Phosphatidylethanolamine-binding protein CDIF29627_RS16865 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29627_RS16890 PF03952 Enolase, N-terminal domain CDIF29627_RS16890 PF00113 Enolase, C-terminal TIM barrel domain CDIF29627_RS16895 PF01676 Metalloenzyme superfamily CDIF29627_RS16895 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDIF29627_RS16900 PF00121 Triosephosphate isomerase CDIF29627_RS16905 PF00162 Phosphoglycerate kinase CDIF29627_RS16910 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDIF29627_RS16910 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDIF29627_RS16915 PF04198 Putative sugar-binding domain CDIF29627_RS16920 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDIF29627_RS16920 PF04552 Sigma-54, DNA binding domain CDIF29627_RS16920 PF04963 Sigma-54 factor, core binding domain CDIF29627_RS16925 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29627_RS16925 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29627_RS16930 PF01979 Amidohydrolase family CDIF29627_RS16935 PF01180 Dihydroorotate dehydrogenase CDIF29627_RS16940 PF00860 Permease family CDIF29627_RS16945 PF01979 Amidohydrolase family CDIF29627_RS16950 PF07969 Amidohydrolase family CDIF29627_RS16955 PF07687 Peptidase dimerisation domain CDIF29627_RS16955 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS16960 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29627_RS16970 PF00158 Sigma-54 interaction domain CDIF29627_RS16970 PF13188 PAS domain CDIF29627_RS16970 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS16975 PF01042 Endoribonuclease L-PSP CDIF29627_RS16990 PF02525 Flavodoxin-like fold CDIF29627_RS16995 PF13411 MerR HTH family regulatory protein CDIF29627_RS17005 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29627_RS17005 PF04122 Putative cell wall binding repeat 2 CDIF29627_RS17010 PF00005 ABC transporter CDIF29627_RS17015 PF02687 FtsX-like permease family CDIF29627_RS17025 PF00072 Response regulator receiver domain CDIF29627_RS17025 PF00196 Bacterial regulatory proteins, luxR family CDIF29627_RS17035 PF12833 Helix-turn-helix domain CDIF29627_RS17040 PF17755 UvrA DNA-binding domain CDIF29627_RS17040 PF17760 UvrA interaction domain CDIF29627_RS17040 PF00005 ABC transporter CDIF29627_RS17050 PF13411 MerR HTH family regulatory protein CDIF29627_RS17055 PF07690 Major Facilitator Superfamily CDIF29627_RS17070 PF00005 ABC transporter CDIF29627_RS17075 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS17075 PF00672 HAMP domain CDIF29627_RS17075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS17080 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS17080 PF00072 Response regulator receiver domain CDIF29627_RS17085 PF02096 60Kd inner membrane protein CDIF29627_RS17095 PF00881 Nitroreductase family CDIF29627_RS17105 PF01554 MatE CDIF29627_RS17135 PF12833 Helix-turn-helix domain CDIF29627_RS17140 PF00005 ABC transporter CDIF29627_RS17140 PF00571 CBS domain CDIF29627_RS17145 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CDIF29627_RS17150 PF00005 ABC transporter CDIF29627_RS17150 PF17755 UvrA DNA-binding domain CDIF29627_RS17150 PF17760 UvrA interaction domain CDIF29627_RS17160 PF01430 Hsp33 protein CDIF29627_RS17165 PF13649 Methyltransferase domain CDIF29627_RS17175 PF07687 Peptidase dimerisation domain CDIF29627_RS17175 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS17180 PF03315 Serine dehydratase beta chain CDIF29627_RS17180 PF03313 Serine dehydratase alpha chain CDIF29627_RS17185 PF00701 Dihydrodipicolinate synthetase family CDIF29627_RS17190 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDIF29627_RS17190 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDIF29627_RS17195 PF00701 Dihydrodipicolinate synthetase family CDIF29627_RS17200 PF01113 Dihydrodipicolinate reductase, N-terminus CDIF29627_RS17200 PF05173 Dihydrodipicolinate reductase, C-terminus CDIF29627_RS17205 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CDIF29627_RS17205 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29627_RS17205 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29627_RS17215 PF05173 Dihydrodipicolinate reductase, C-terminus CDIF29627_RS17215 PF01113 Dihydrodipicolinate reductase, N-terminus CDIF29627_RS17250 PF04055 Radical SAM superfamily CDIF29627_RS17270 PF03432 Relaxase/Mobilisation nuclease domain CDIF29627_RS17280 PF00069 Protein kinase domain CDIF29627_RS17280 PF08239 Bacterial SH3 domain CDIF29627_RS17285 PF00872 Transposase, Mutator family CDIF29627_RS17305 PF01751 Toprim domain CDIF29627_RS17305 PF01131 DNA topoisomerase CDIF29627_RS17320 PF00877 NlpC/P60 family CDIF29627_RS17325 PF01555 DNA methylase CDIF29627_RS17375 PF00156 Phosphoribosyl transferase domain CDIF29627_RS17380 PF03313 Serine dehydratase alpha chain CDIF29627_RS17390 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS17390 PF00158 Sigma-54 interaction domain CDIF29627_RS17390 PF13188 PAS domain CDIF29627_RS17395 PF01209 ubiE/COQ5 methyltransferase family CDIF29627_RS17410 PF05544 Proline racemase CDIF29627_RS17420 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29627_RS17425 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29627_RS17440 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29627_RS17450 PF02954 Bacterial regulatory protein, Fis family CDIF29627_RS17450 PF00158 Sigma-54 interaction domain CDIF29627_RS17450 PF13426 PAS domain CDIF29627_RS17460 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29627_RS17460 PF13237 4Fe-4S dicluster domain CDIF29627_RS17460 PF10531 SLBB domain CDIF29627_RS17460 PF13375 RnfC Barrel sandwich hybrid domain CDIF29627_RS17470 PF01522 Polysaccharide deacetylase CDIF29627_RS17475 PF00269 Small, acid-soluble spore proteins, alpha/beta type CDIF29627_RS17495 PF08245 Mur ligase middle domain CDIF29627_RS17505 PF00072 Response regulator receiver domain CDIF29627_RS17505 PF04397 LytTr DNA-binding domain CDIF29627_RS17510 PF10458 Valyl tRNA synthetase tRNA binding arm CDIF29627_RS17510 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29627_RS17510 PF08264 Anticodon-binding domain of tRNA CDIF29627_RS17520 PF01522 Polysaccharide deacetylase CDIF29627_RS17535 PF01895 PhoU domain CDIF29627_RS17540 PF00005 ABC transporter CDIF29627_RS17545 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS17550 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS17560 PF13732 Domain of unknown function (DUF4162) CDIF29627_RS17560 PF00005 ABC transporter CDIF29627_RS17565 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS17565 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS17570 PF00072 Response regulator receiver domain CDIF29627_RS17570 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS17575 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS17575 PF00072 Response regulator receiver domain CDIF29627_RS17580 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS17580 PF18698 Histidine kinase sensor domain CDIF29627_RS17580 PF00672 HAMP domain CDIF29627_RS17580 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS17585 PF00072 Response regulator receiver domain CDIF29627_RS17585 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS17590 PF12849 PBP superfamily domain CDIF29627_RS17595 PF08439 Oligopeptidase F CDIF29627_RS17595 PF01432 Peptidase family M3 CDIF29627_RS17600 PF02308 MgtC family CDIF29627_RS17620 PF07664 Ferrous iron transport protein B C terminus CDIF29627_RS17620 PF17910 FeoB cytosolic helical domain CDIF29627_RS17620 PF02421 Ferrous iron transport protein B CDIF29627_RS17620 PF07670 Nucleoside recognition CDIF29627_RS17625 PF13580 SIS domain CDIF29627_RS17630 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29627_RS17635 PF03609 PTS system sorbose-specific iic component CDIF29627_RS17640 PF03830 PTS system sorbose subfamily IIB component CDIF29627_RS17640 PF03610 PTS system fructose IIA component CDIF29627_RS17645 PF03830 PTS system sorbose subfamily IIB component CDIF29627_RS17645 PF03610 PTS system fructose IIA component CDIF29627_RS17650 PF00874 PRD domain CDIF29627_RS17650 PF00158 Sigma-54 interaction domain CDIF29627_RS17655 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDIF29627_RS17655 PF03807 NADP oxidoreductase coenzyme F420-dependent CDIF29627_RS17660 PF02901 Pyruvate formate lyase-like CDIF29627_RS17660 PF01228 Glycine radical CDIF29627_RS17665 PF04055 Radical SAM superfamily CDIF29627_RS17670 PF13180 PDZ domain CDIF29627_RS17675 PF00342 Phosphoglucose isomerase CDIF29627_RS17680 PF02690 Na+/Pi-cotransporter CDIF29627_RS17700 PF02810 SEC-C motif CDIF29627_RS17700 PF05225 helix-turn-helix, Psq domain CDIF29627_RS17720 PF07963 Prokaryotic N-terminal methylation motif CDIF29627_RS17720 PF00114 Pilin (bacterial filament) CDIF29627_RS17725 PF00482 Type II secretion system (T2SS), protein F CDIF29627_RS17730 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDIF29627_RS17730 PF00437 Type II/IV secretion system protein CDIF29627_RS17745 PF07690 Major Facilitator Superfamily CDIF29627_RS17750 PF01926 50S ribosome-binding GTPase CDIF29627_RS17755 PF05362 Lon protease (S16) C-terminal proteolytic domain CDIF29627_RS17755 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDIF29627_RS17755 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS17765 PF02417 Chromate transporter CDIF29627_RS17770 PF07724 AAA domain (Cdc48 subfamily) CDIF29627_RS17770 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29627_RS17770 PF06689 ClpX C4-type zinc finger CDIF29627_RS17775 PF00574 Clp protease CDIF29627_RS17780 PF05697 Bacterial trigger factor protein (TF) CDIF29627_RS17780 PF05698 Bacterial trigger factor protein (TF) C-terminus CDIF29627_RS17780 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDIF29627_RS17790 PF01138 3' exoribonuclease family, domain 1 CDIF29627_RS17790 PF03725 3' exoribonuclease family, domain 2 CDIF29627_RS17795 PF01653 NAD-dependent DNA ligase adenylation domain CDIF29627_RS17795 PF12826 Helix-hairpin-helix motif CDIF29627_RS17795 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDIF29627_RS17795 PF03120 NAD-dependent DNA ligase OB-fold domain CDIF29627_RS17795 PF00533 BRCA1 C Terminus (BRCT) domain CDIF29627_RS17815 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29627_RS17815 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDIF29627_RS17815 PF13247 4Fe-4S dicluster domain CDIF29627_RS17820 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29627_RS17820 PF02256 Iron hydrogenase small subunit CDIF29627_RS17820 PF00037 4Fe-4S binding domain CDIF29627_RS17820 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDIF29627_RS17825 PF12800 4Fe-4S binding domain CDIF29627_RS17825 PF13247 4Fe-4S dicluster domain CDIF29627_RS17835 PF02634 FdhD/NarQ family CDIF29627_RS17850 PF00072 Response regulator receiver domain CDIF29627_RS17850 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS17885 PF00535 Glycosyl transferase family 2 CDIF29627_RS17885 PF13181 Tetratricopeptide repeat CDIF29627_RS17890 PF00574 Clp protease CDIF29627_RS17895 PF12833 Helix-turn-helix domain CDIF29627_RS17900 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS17900 PF00155 Aminotransferase class I and II CDIF29627_RS17910 PF00881 Nitroreductase family CDIF29627_RS17915 PF01638 HxlR-like helix-turn-helix CDIF29627_RS17920 PF01965 DJ-1/PfpI family CDIF29627_RS17925 PF01037 Lrp/AsnC ligand binding domain CDIF29627_RS17930 PF12848 ABC transporter CDIF29627_RS17930 PF00005 ABC transporter CDIF29627_RS17935 PF00072 Response regulator receiver domain CDIF29627_RS17935 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS17955 PF00005 ABC transporter CDIF29627_RS17960 PF00990 Diguanylate cyclase, GGDEF domain CDIF29627_RS17960 PF17156 Gammaproteobacterial periplasmic sensor domain CDIF29627_RS17975 PF03193 RsgA GTPase CDIF29627_RS18000 PF01938 TRAM domain CDIF29627_RS18000 PF05958 tRNA (Uracil-5-)-methyltransferase CDIF29627_RS18005 PF00391 PEP-utilising enzyme, mobile domain CDIF29627_RS18005 PF00224 Pyruvate kinase, barrel domain CDIF29627_RS18005 PF02887 Pyruvate kinase, alpha/beta domain CDIF29627_RS18010 PF00365 Phosphofructokinase CDIF29627_RS18015 PF14579 Helix-hairpin-helix motif CDIF29627_RS18015 PF02811 PHP domain CDIF29627_RS18015 PF01336 OB-fold nucleic acid binding domain CDIF29627_RS18015 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29627_RS18015 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29627_RS18020 PF14527 WhiA LAGLIDADG-like domain CDIF29627_RS18020 PF10298 WhiA N-terminal LAGLIDADG-like domain CDIF29627_RS18020 PF02650 WhiA C-terminal HTH domain CDIF29627_RS18025 PF00293 NUDIX domain CDIF29627_RS18030 PF01933 Uncharacterised protein family UPF0052 CDIF29627_RS18035 PF03668 P-loop ATPase protein family CDIF29627_RS18040 PF02811 PHP domain CDIF29627_RS18045 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDIF29627_RS18045 PF01565 FAD binding domain CDIF29627_RS18050 PF01226 Formate/nitrite transporter CDIF29627_RS18055 PF13091 PLD-like domain CDIF29627_RS18055 PF13396 Phospholipase_D-nuclease N-terminal CDIF29627_RS18065 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDIF29627_RS18065 PF00037 4Fe-4S binding domain CDIF29627_RS18065 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29627_RS18070 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29627_RS18070 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDIF29627_RS18070 PF02256 Iron hydrogenase small subunit CDIF29627_RS18070 PF00037 4Fe-4S binding domain CDIF29627_RS18075 PF01624 MutS domain I CDIF29627_RS18075 PF00488 MutS domain V CDIF29627_RS18075 PF05188 MutS domain II CDIF29627_RS18075 PF05192 MutS domain III CDIF29627_RS18075 PF05190 MutS family domain IV CDIF29627_RS18080 PF02603 HPr Serine kinase N terminus CDIF29627_RS18080 PF07475 HPr Serine kinase C-terminal domain CDIF29627_RS18085 PF02151 UvrB/uvrC motif CDIF29627_RS18085 PF08459 UvrC Helix-hairpin-helix N-terminal CDIF29627_RS18085 PF01541 GIY-YIG catalytic domain CDIF29627_RS18085 PF12826 Helix-hairpin-helix motif CDIF29627_RS18090 PF17760 UvrA interaction domain CDIF29627_RS18090 PF17755 UvrA DNA-binding domain CDIF29627_RS18095 PF17757 UvrB interaction domain CDIF29627_RS18095 PF02151 UvrB/uvrC motif CDIF29627_RS18095 PF04851 Type III restriction enzyme, res subunit CDIF29627_RS18095 PF00271 Helicase conserved C-terminal domain CDIF29627_RS18095 PF12344 Ultra-violet resistance protein B CDIF29627_RS18105 PF13416 Bacterial extracellular solute-binding protein CDIF29627_RS18110 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS18115 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS18120 PF17912 MalK OB fold domain CDIF29627_RS18120 PF00005 ABC transporter CDIF29627_RS18140 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18140 PF10414 Sirohaem synthase dimerisation region CDIF29627_RS18140 PF14824 Sirohaem biosynthesis protein central CDIF29627_RS18145 PF00490 Delta-aminolevulinic acid dehydratase CDIF29627_RS18150 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18150 PF02602 Uroporphyrinogen-III synthase HemD CDIF29627_RS18155 PF03900 Porphobilinogen deaminase, C-terminal domain CDIF29627_RS18155 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDIF29627_RS18160 PF06180 Cobalt chelatase (CbiK) CDIF29627_RS18165 PF02571 Precorrin-6x reductase CbiJ/CobK CDIF29627_RS18170 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18175 PF11761 Cobalamin biosynthesis central region CDIF29627_RS18175 PF01890 Cobalamin synthesis G C-terminus CDIF29627_RS18175 PF11760 Cobalamin synthesis G N-terminal CDIF29627_RS18180 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18185 PF05175 Methyltransferase small domain CDIF29627_RS18190 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18195 PF01888 CbiD CDIF29627_RS18200 PF02570 Precorrin-8X methylmutase CDIF29627_RS18205 PF00288 GHMP kinases N terminal domain CDIF29627_RS18210 PF00155 Aminotransferase class I and II CDIF29627_RS18215 PF03186 CobD/Cbib protein CDIF29627_RS18220 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDIF29627_RS18220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29627_RS18225 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDIF29627_RS18235 PF02654 Cobalamin-5-phosphate synthase CDIF29627_RS18240 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDIF29627_RS18245 PF02277 Phosphoribosyltransferase CDIF29627_RS18265 PF00155 Aminotransferase class I and II CDIF29627_RS18270 PF01321 Creatinase/Prolidase N-terminal domain CDIF29627_RS18270 PF00557 Metallopeptidase family M24 CDIF29627_RS18275 PF02378 Phosphotransferase system, EIIC CDIF29627_RS18275 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS18280 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS18285 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29627_RS18290 PF05343 M42 glutamyl aminopeptidase CDIF29627_RS18295 PF00874 PRD domain CDIF29627_RS18295 PF03123 CAT RNA binding domain CDIF29627_RS18300 PF01116 Fructose-bisphosphate aldolase class-II CDIF29627_RS18305 PF01380 SIS domain CDIF29627_RS18310 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDIF29627_RS18315 PF00294 pfkB family carbohydrate kinase CDIF29627_RS18320 PF07702 UTRA domain CDIF29627_RS18320 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS18325 PF01979 Amidohydrolase family CDIF29627_RS18345 PF01471 Putative peptidoglycan binding domain CDIF29627_RS18345 PF03572 Peptidase family S41 CDIF29627_RS18345 PF17820 PDZ domain CDIF29627_RS18350 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDIF29627_RS18365 PF02779 Transketolase, pyrimidine binding domain CDIF29627_RS18365 PF02780 Transketolase, C-terminal domain CDIF29627_RS18370 PF00456 Transketolase, thiamine diphosphate binding domain CDIF29627_RS18375 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CDIF29627_RS18385 PF00842 Alanine racemase, C-terminal domain CDIF29627_RS18385 PF01168 Alanine racemase, N-terminal domain CDIF29627_RS18395 PF00478 IMP dehydrogenase / GMP reductase domain CDIF29627_RS18395 PF00571 CBS domain CDIF29627_RS18400 PF01648 4'-phosphopantetheinyl transferase superfamily CDIF29627_RS18405 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDIF29627_RS18405 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDIF29627_RS18410 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS18410 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29627_RS18415 PF00231 ATP synthase CDIF29627_RS18420 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS18420 PF00306 ATP synthase alpha/beta chain, C terminal domain CDIF29627_RS18420 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29627_RS18425 PF00213 ATP synthase delta (OSCP) subunit CDIF29627_RS18430 PF00430 ATP synthase B/B' CF(0) CDIF29627_RS18435 PF00137 ATP synthase subunit C CDIF29627_RS18440 PF00119 ATP synthase A chain CDIF29627_RS18465 PF02625 XdhC and CoxI family CDIF29627_RS18465 PF13478 XdhC Rossmann domain CDIF29627_RS18475 PF02502 Ribose/Galactose Isomerase CDIF29627_RS18480 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDIF29627_RS18485 PF01300 Telomere recombination CDIF29627_RS18485 PF03481 Putative GTP-binding controlling metal-binding CDIF29627_RS18495 PF03462 PCRF domain CDIF29627_RS18495 PF00472 RF-1 domain CDIF29627_RS18500 PF05175 Methyltransferase small domain CDIF29627_RS18500 PF17827 PrmC N-terminal domain CDIF29627_RS18505 PF07136 Protein of unknown function (DUF1385) CDIF29627_RS18510 PF01197 Ribosomal protein L31 CDIF29627_RS18515 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29627_RS18515 PF07498 Rho termination factor, N-terminal domain CDIF29627_RS18515 PF07497 Rho termination factor, RNA-binding domain CDIF29627_RS18520 PF00483 Nucleotidyl transferase CDIF29627_RS18525 PF08439 Oligopeptidase F CDIF29627_RS18525 PF01432 Peptidase family M3 CDIF29627_RS18530 PF07228 Stage II sporulation protein E (SpoIIE) CDIF29627_RS18535 PF02541 Ppx/GppA phosphatase family CDIF29627_RS18555 PF01479 S4 domain CDIF29627_RS18560 PF00216 Bacterial DNA-binding protein CDIF29627_RS18565 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18565 PF03819 MazG nucleotide pyrophosphohydrolase domain CDIF29627_RS18570 PF14667 Polysaccharide biosynthesis C-terminal domain CDIF29627_RS18570 PF01943 Polysaccharide biosynthesis protein CDIF29627_RS18575 PF15714 Stage V sporulation protein T C-terminal, transcription factor CDIF29627_RS18575 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CDIF29627_RS18585 PF02559 CarD-like/TRCF domain CDIF29627_RS18585 PF17757 UvrB interaction domain CDIF29627_RS18585 PF00270 DEAD/DEAH box helicase CDIF29627_RS18585 PF00271 Helicase conserved C-terminal domain CDIF29627_RS18585 PF03461 TRCF domain CDIF29627_RS18590 PF01195 Peptidyl-tRNA hydrolase CDIF29627_RS18600 PF06750 Bacterial Peptidase A24 N-terminal domain CDIF29627_RS18600 PF01478 Type IV leader peptidase family CDIF29627_RS18605 PF00437 Type II/IV secretion system protein CDIF29627_RS18635 PF00482 Type II secretion system (T2SS), protein F CDIF29627_RS18640 PF00437 Type II/IV secretion system protein CDIF29627_RS18640 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDIF29627_RS18650 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDIF29627_RS18650 PF14572 Phosphoribosyl synthetase-associated domain CDIF29627_RS18655 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29627_RS18655 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29627_RS18655 PF00483 Nucleotidyl transferase CDIF29627_RS18660 PF04026 SpoVG CDIF29627_RS18665 PF00156 Phosphoribosyl transferase domain CDIF29627_RS18665 PF09182 Bacterial purine repressor, N-terminal CDIF29627_RS18670 PF08245 Mur ligase middle domain CDIF29627_RS18670 PF02875 Mur ligase family, glutamate ligase domain CDIF29627_RS18670 PF01225 Mur ligase family, catalytic domain CDIF29627_RS18680 PF16916 Dimerisation domain of Zinc Transporter CDIF29627_RS18680 PF01545 Cation efflux family CDIF29627_RS18685 PF01546 Peptidase family M20/M25/M40 CDIF29627_RS18685 PF07687 Peptidase dimerisation domain CDIF29627_RS18695 PF00398 Ribosomal RNA adenine dimethylase CDIF29627_RS18700 PF13331 Domain of unknown function (DUF4093) CDIF29627_RS18700 PF01751 Toprim domain CDIF29627_RS18715 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29627_RS18720 PF00005 ABC transporter CDIF29627_RS18725 PF02811 PHP domain CDIF29627_RS18730 PF07969 Amidohydrolase family CDIF29627_RS18735 PF00005 ABC transporter CDIF29627_RS18740 PF00005 ABC transporter CDIF29627_RS18745 PF06007 Phosphonate metabolism protein PhnJ CDIF29627_RS18750 PF05861 Bacterial phosphonate metabolism protein (PhnI) CDIF29627_RS18765 PF01026 TatD related DNase CDIF29627_RS18770 PF08264 Anticodon-binding domain of tRNA CDIF29627_RS18770 PF09334 tRNA synthetases class I (M) CDIF29627_RS18770 PF01588 Putative tRNA binding domain CDIF29627_RS18775 PF07670 Nucleoside recognition CDIF29627_RS18785 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDIF29627_RS18785 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDIF29627_RS18785 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CDIF29627_RS18790 PF01037 Lrp/AsnC ligand binding domain CDIF29627_RS18795 PF01743 Poly A polymerase head domain CDIF29627_RS18795 PF12627 Probable RNA and SrmB- binding site of polymerase A CDIF29627_RS18795 PF01966 HD domain CDIF29627_RS18800 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29627_RS18805 PF05175 Methyltransferase small domain CDIF29627_RS18810 PF04468 PSP1 C-terminal conserved region CDIF29627_RS18815 PF09115 DNA polymerase III, delta subunit, C terminal CDIF29627_RS18820 PF02223 Thymidylate kinase CDIF29627_RS18825 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDIF29627_RS18825 PF01276 Orn/Lys/Arg decarboxylase, major domain CDIF29627_RS18830 PF04070 Domain of unknown function (DUF378) CDIF29627_RS18855 PF01336 OB-fold nucleic acid binding domain CDIF29627_RS18855 PF00152 tRNA synthetases class II (D, K and N) CDIF29627_RS18860 PF01272 Transcription elongation factor, GreA/GreB, C-term CDIF29627_RS18860 PF03449 Transcription elongation factor, N-terminal CDIF29627_RS18865 PF01207 Dihydrouridine synthase (Dus) CDIF29627_RS18870 PF03309 Type III pantothenate kinase CDIF29627_RS18880 PF03576 Peptidase family S58 CDIF29627_RS18885 PF08279 HTH domain CDIF29627_RS18885 PF02237 Biotin protein ligase C terminal domain CDIF29627_RS18885 PF03099 Biotin/lipoate A/B protein ligase family CDIF29627_RS18890 PF17862 AAA+ lid domain CDIF29627_RS18890 PF01434 Peptidase family M41 CDIF29627_RS18890 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29627_RS18895 PF01171 PP-loop family CDIF29627_RS18895 PF11734 TilS substrate C-terminal domain CDIF29627_RS18905 PF01177 Asp/Glu/Hydantoin racemase CDIF29627_RS18910 PF01471 Putative peptidoglycan binding domain CDIF29627_RS18910 PF07486 Cell Wall Hydrolase CDIF29627_RS18915 PF09551 Stage II sporulation protein R (spore_II_R) CDIF29627_RS18920 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS18920 PF07729 FCD domain CDIF29627_RS18925 PF00288 GHMP kinases N terminal domain CDIF29627_RS18925 PF08544 GHMP kinases C terminal CDIF29627_RS18940 PF05582 YabG peptidase U57 CDIF29627_RS18945 PF01244 Membrane dipeptidase (Peptidase family M19) CDIF29627_RS18955 PF07516 SecA Wing and Scaffold domain CDIF29627_RS18955 PF01043 SecA preprotein cross-linking domain CDIF29627_RS18955 PF07517 SecA DEAD-like domain CDIF29627_RS18955 PF02810 SEC-C motif CDIF29627_RS18980 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29627_RS18985 PF07690 Major Facilitator Superfamily CDIF29627_RS18990 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29627_RS18995 PF00239 Resolvase, N terminal domain CDIF29627_RS18995 PF02796 Helix-turn-helix domain of resolvase CDIF29627_RS19010 PF10672 S-adenosylmethionine-dependent methyltransferase CDIF29627_RS19015 PF01479 S4 domain CDIF29627_RS19015 PF00849 RNA pseudouridylate synthase CDIF29627_RS19020 PF13411 MerR HTH family regulatory protein CDIF29627_RS19020 PF06445 GyrI-like small molecule binding domain CDIF29627_RS19030 PF02687 FtsX-like permease family CDIF29627_RS19030 PF12704 MacB-like periplasmic core domain CDIF29627_RS19030 PF00005 ABC transporter CDIF29627_RS19035 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS19035 PF00989 PAS fold CDIF29627_RS19035 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS19035 PF00672 HAMP domain CDIF29627_RS19035 PF18698 Histidine kinase sensor domain CDIF29627_RS19040 PF00072 Response regulator receiver domain CDIF29627_RS19040 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS19045 PF03551 Transcriptional regulator PadR-like family CDIF29627_RS19060 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDIF29627_RS19060 PF02142 MGS-like domain CDIF29627_RS19060 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29627_RS19065 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDIF29627_RS19065 PF00117 Glutamine amidotransferase class-I CDIF29627_RS19070 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDIF29627_RS19070 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29627_RS19070 PF02142 MGS-like domain CDIF29627_RS19075 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDIF29627_RS19075 PF00117 Glutamine amidotransferase class-I CDIF29627_RS19080 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDIF29627_RS19095 PF02073 Thermophilic metalloprotease (M29) CDIF29627_RS19100 PF00809 Pterin binding enzyme CDIF29627_RS19100 PF02607 B12 binding domain CDIF29627_RS19100 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDIF29627_RS19100 PF02310 B12 binding domain CDIF29627_RS19100 PF02574 Homocysteine S-methyltransferase CDIF29627_RS19110 PF02664 S-Ribosylhomocysteinase (LuxS) CDIF29627_RS19115 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29627_RS19115 PF00512 His Kinase A (phospho-acceptor) domain CDIF29627_RS19120 PF00486 Transcriptional regulatory protein, C terminal CDIF29627_RS19120 PF00072 Response regulator receiver domain CDIF29627_RS19125 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29627_RS19130 PF01171 PP-loop family CDIF29627_RS19135 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDIF29627_RS19135 PF00149 Calcineurin-like phosphoesterase CDIF29627_RS19140 PF01370 NAD dependent epimerase/dehydratase family CDIF29627_RS19145 PF13419 Haloacid dehalogenase-like hydrolase CDIF29627_RS19155 PF01979 Amidohydrolase family CDIF29627_RS19165 PF00005 ABC transporter CDIF29627_RS19165 PF12857 TOBE-like domain CDIF29627_RS19175 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29627_RS19180 PF01554 MatE CDIF29627_RS19195 PF13411 MerR HTH family regulatory protein CDIF29627_RS19195 PF06445 GyrI-like small molecule binding domain CDIF29627_RS19200 PF00999 Sodium/hydrogen exchanger family CDIF29627_RS19200 PF02080 TrkA-C domain CDIF29627_RS19200 PF03471 Transporter associated domain CDIF29627_RS19205 PF10026 Predicted Zn-dependent protease (DUF2268) CDIF29627_RS19215 PF13673 Acetyltransferase (GNAT) domain CDIF29627_RS19215 PF00958 GMP synthase C terminal domain CDIF29627_RS19215 PF13302 Acetyltransferase (GNAT) domain CDIF29627_RS19215 PF03352 Methyladenine glycosylase CDIF29627_RS19215 PF00117 Glutamine amidotransferase class-I CDIF29627_RS19225 PF00805 Pentapeptide repeats (8 copies) CDIF29627_RS19230 PF08274 PhnA Zinc-Ribbon CDIF29627_RS19230 PF03831 PhnA domain CDIF29627_RS19235 PF00005 ABC transporter CDIF29627_RS19245 PF02581 Thiamine monophosphate synthase CDIF29627_RS19250 PF00701 Dihydrodipicolinate synthetase family CDIF29627_RS19255 PF01380 SIS domain CDIF29627_RS19255 PF00571 CBS domain CDIF29627_RS19265 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS19275 PF00857 Isochorismatase family CDIF29627_RS19285 PF13411 MerR HTH family regulatory protein CDIF29627_RS19315 PF03466 LysR substrate binding domain CDIF29627_RS19315 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS19320 PF00294 pfkB family carbohydrate kinase CDIF29627_RS19325 PF07071 KDGP aldolase CDIF29627_RS19330 PF03841 L-seryl-tRNA selenium transferase CDIF29627_RS19335 PF01979 Amidohydrolase family CDIF29627_RS19345 PF02378 Phosphotransferase system, EIIC CDIF29627_RS19350 PF07702 UTRA domain CDIF29627_RS19350 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS19355 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29627_RS19360 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29627_RS19365 PF02590 Predicted SPOUT methyltransferase CDIF29627_RS19370 PF02378 Phosphotransferase system, EIIC CDIF29627_RS19375 PF00753 Metallo-beta-lactamase superfamily CDIF29627_RS19390 PF01695 IstB-like ATP binding protein CDIF29627_RS19415 PF00709 Adenylosuccinate synthetase CDIF29627_RS19425 PF03796 DnaB-like helicase C terminal domain CDIF29627_RS19425 PF00772 DnaB-like helicase N terminal domain CDIF29627_RS19430 PF01281 Ribosomal protein L9, N-terminal domain CDIF29627_RS19430 PF03948 Ribosomal protein L9, C-terminal domain CDIF29627_RS19435 PF02272 DHHA1 domain CDIF29627_RS19435 PF01368 DHH family CDIF29627_RS19450 PF01084 Ribosomal protein S18 CDIF29627_RS19455 PF00436 Single-strand binding protein family CDIF29627_RS19460 PF01250 Ribosomal protein S6 CDIF29627_RS19465 PF00155 Aminotransferase class I and II CDIF29627_RS19480 PF01206 Sulfurtransferase TusA CDIF29627_RS19495 PF02548 Ketopantoate hydroxymethyltransferase CDIF29627_RS19510 PF00155 Aminotransferase class I and II CDIF29627_RS19510 PF00392 Bacterial regulatory proteins, gntR family CDIF29627_RS19515 PF03466 LysR substrate binding domain CDIF29627_RS19515 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29627_RS19525 PF00266 Aminotransferase class-V CDIF29627_RS19530 PF02195 ParB-like nuclease domain CDIF29627_RS19530 PF17762 HTH domain found in ParB protein CDIF29627_RS19535 PF13614 AAA domain CDIF29627_RS19540 PF02195 ParB-like nuclease domain CDIF29627_RS19540 PF17762 HTH domain found in ParB protein CDIF29627_RS19545 PF02527 rRNA small subunit methyltransferase G CDIF29627_RS19550 PF13932 GidA associated domain CDIF29627_RS19550 PF01134 Glucose inhibited division protein A CDIF29627_RS19555 PF12631 MnmE helical domain CDIF29627_RS19555 PF10396 GTP-binding protein TrmE N-terminus CDIF29627_RS19555 PF01926 50S ribosome-binding GTPase CDIF29627_RS19560 PF01424 R3H domain CDIF29627_RS19560 PF14804 Jag N-terminus CDIF29627_RS19565 PF02096 60Kd inner membrane protein CDIF29627_RS19570 PF01809 Putative membrane protein insertion efficiency factor CDIF29627_RS19575 PF00825 Ribonuclease P CDIF29627_RS19580 PF00468 Ribosomal protein L34