locus-tag class description CDIF29688_RS00005 PF00308 Bacterial dnaA protein CDIF29688_RS00005 PF08299 Bacterial dnaA protein helix-turn-helix CDIF29688_RS00005 PF11638 DnaA N-terminal domain CDIF29688_RS00010 PF02768 DNA polymerase III beta subunit, C-terminal domain CDIF29688_RS00010 PF02767 DNA polymerase III beta subunit, central domain CDIF29688_RS00010 PF00712 DNA polymerase III beta subunit, N-terminal domain CDIF29688_RS00020 PF02463 RecF/RecN/SMC N terminal domain CDIF29688_RS00025 PF01751 Toprim domain CDIF29688_RS00025 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS00025 PF00204 DNA gyrase B CDIF29688_RS00025 PF00986 DNA gyrase B subunit, carboxyl terminus CDIF29688_RS00030 PF00521 DNA gyrase/topoisomerase IV, subunit A CDIF29688_RS00030 PF03989 DNA gyrase C-terminal domain, beta-propeller CDIF29688_RS00045 PF01740 STAS domain CDIF29688_RS00050 PF13581 Histidine kinase-like ATPase domain CDIF29688_RS00055 PF04545 Sigma-70, region 4 CDIF29688_RS00055 PF04539 Sigma-70 region 3 CDIF29688_RS00055 PF04542 Sigma-70 region 2 CDIF29688_RS00105 PF02829 3H domain CDIF29688_RS00105 PF08279 HTH domain CDIF29688_RS00110 PF00924 Mechanosensitive ion channel CDIF29688_RS00110 PF05552 Conserved TM helix CDIF29688_RS00115 PF02403 Seryl-tRNA synthetase N-terminal domain CDIF29688_RS00115 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29688_RS00120 PF14437 MafB19-like deaminase CDIF29688_RS00135 PF12169 DNA polymerase III subunits gamma and tau domain III CDIF29688_RS00140 PF02575 YbaB/EbfC DNA-binding family CDIF29688_RS00145 PF02132 RecR protein CDIF29688_RS00145 PF13662 Toprim domain CDIF29688_RS00155 PF00534 Glycosyl transferases group 1 CDIF29688_RS00155 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29688_RS00395 PF02436 Conserved carboxylase domain CDIF29688_RS00395 PF00682 HMGL-like CDIF29688_RS00395 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29688_RS00395 PF00364 Biotin-requiring enzyme CDIF29688_RS00395 PF00289 Biotin carboxylase, N-terminal domain CDIF29688_RS00395 PF02785 Biotin carboxylase C-terminal domain CDIF29688_RS00400 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS00400 PF03144 Elongation factor Tu domain 2 CDIF29688_RS00400 PF14492 Elongation Factor G, domain II CDIF29688_RS00400 PF00679 Elongation factor G C-terminus CDIF29688_RS00400 PF03764 Elongation factor G, domain IV CDIF29688_RS00405 PF05848 CtsR N-terminal HTH domain CDIF29688_RS00405 PF17727 CtsR C-terminal dimerization domain CDIF29688_RS00410 PF02151 UvrB/uvrC motif CDIF29688_RS00415 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CDIF29688_RS00420 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29688_RS00420 PF17871 AAA lid domain CDIF29688_RS00420 PF07724 AAA domain (Cdc48 subfamily) CDIF29688_RS00420 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS00420 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29688_RS00425 PF18073 Rubredoxin metal binding domain CDIF29688_RS00430 PF10635 DisA bacterial checkpoint controller linker region CDIF29688_RS00430 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDIF29688_RS00450 PF04198 Putative sugar-binding domain CDIF29688_RS00455 PF00676 Dehydrogenase E1 component CDIF29688_RS00460 PF02779 Transketolase, pyrimidine binding domain CDIF29688_RS00460 PF02780 Transketolase, C-terminal domain CDIF29688_RS00465 PF00364 Biotin-requiring enzyme CDIF29688_RS00465 PF02817 e3 binding domain CDIF29688_RS00465 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CDIF29688_RS00470 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS00470 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29688_RS00475 PF03610 PTS system fructose IIA component CDIF29688_RS00475 PF00874 PRD domain CDIF29688_RS00475 PF00158 Sigma-54 interaction domain CDIF29688_RS00485 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS00490 PF03611 PTS system sugar-specific permease component CDIF29688_RS00500 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29688_RS00505 PF10437 Bacterial lipoate protein ligase C-terminus CDIF29688_RS00505 PF03099 Biotin/lipoate A/B protein ligase family CDIF29688_RS00510 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CDIF29688_RS00515 PF02542 YgbB family CDIF29688_RS00520 PF04073 Aminoacyl-tRNA editing domain CDIF29688_RS00520 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29688_RS00520 PF03129 Anticodon binding domain CDIF29688_RS00525 PF09180 Prolyl-tRNA synthetase, C-terminal CDIF29688_RS00525 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29688_RS00525 PF03129 Anticodon binding domain CDIF29688_RS00530 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDIF29688_RS00540 PF01406 tRNA synthetases class I (C) catalytic domain CDIF29688_RS00540 PF09190 DALR domain CDIF29688_RS00545 PF00636 Ribonuclease III domain CDIF29688_RS00550 PF02511 Thymidylate synthase complementing protein CDIF29688_RS00555 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDIF29688_RS00555 PF00588 SpoU rRNA Methylase family CDIF29688_RS00560 PF05991 YacP-like NYN domain CDIF29688_RS00565 PF08281 Sigma-70, region 4 CDIF29688_RS00565 PF04542 Sigma-70 region 2 CDIF29688_RS00570 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS00570 PF03144 Elongation factor Tu domain 2 CDIF29688_RS00570 PF03143 Elongation factor Tu C-terminal domain CDIF29688_RS00575 PF00471 Ribosomal protein L33 CDIF29688_RS00585 PF00467 KOW motif CDIF29688_RS00585 PF02357 Transcription termination factor nusG CDIF29688_RS00590 PF03946 Ribosomal protein L11, N-terminal domain CDIF29688_RS00590 PF00298 Ribosomal protein L11, RNA binding domain CDIF29688_RS00595 PF00687 Ribosomal protein L1p/L10e family CDIF29688_RS00600 PF00466 Ribosomal protein L10 CDIF29688_RS00605 PF16320 Ribosomal protein L7/L12 dimerisation domain CDIF29688_RS00605 PF00542 Ribosomal protein L7/L12 C-terminal domain CDIF29688_RS00615 PF04565 RNA polymerase Rpb2, domain 3 CDIF29688_RS00615 PF00562 RNA polymerase Rpb2, domain 6 CDIF29688_RS00615 PF04560 RNA polymerase Rpb2, domain 7 CDIF29688_RS00615 PF04561 RNA polymerase Rpb2, domain 2 CDIF29688_RS00615 PF04563 RNA polymerase beta subunit CDIF29688_RS00615 PF10385 RNA polymerase beta subunit external 1 domain CDIF29688_RS00620 PF05000 RNA polymerase Rpb1, domain 4 CDIF29688_RS00620 PF04983 RNA polymerase Rpb1, domain 3 CDIF29688_RS00620 PF00623 RNA polymerase Rpb1, domain 2 CDIF29688_RS00620 PF04998 RNA polymerase Rpb1, domain 5 CDIF29688_RS00620 PF04997 RNA polymerase Rpb1, domain 1 CDIF29688_RS00625 PF00164 Ribosomal protein S12/S23 CDIF29688_RS00630 PF00177 Ribosomal protein S7p/S5e CDIF29688_RS00635 PF14492 Elongation Factor G, domain II CDIF29688_RS00635 PF03144 Elongation factor Tu domain 2 CDIF29688_RS00635 PF03764 Elongation factor G, domain IV CDIF29688_RS00635 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS00635 PF00679 Elongation factor G C-terminus CDIF29688_RS00640 PF03144 Elongation factor Tu domain 2 CDIF29688_RS00640 PF03143 Elongation factor Tu C-terminal domain CDIF29688_RS00640 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS00645 PF00338 Ribosomal protein S10p/S20e CDIF29688_RS00650 PF00297 Ribosomal protein L3 CDIF29688_RS00655 PF00573 Ribosomal protein L4/L1 family CDIF29688_RS00660 PF00276 Ribosomal protein L23 CDIF29688_RS00665 PF00181 Ribosomal Proteins L2, RNA binding domain CDIF29688_RS00665 PF03947 Ribosomal Proteins L2, C-terminal domain CDIF29688_RS00670 PF00203 Ribosomal protein S19 CDIF29688_RS00675 PF00237 Ribosomal protein L22p/L17e CDIF29688_RS00680 PF00189 Ribosomal protein S3, C-terminal domain CDIF29688_RS00680 PF07650 KH domain CDIF29688_RS00685 PF00252 Ribosomal protein L16p/L10e CDIF29688_RS00690 PF00831 Ribosomal L29 protein CDIF29688_RS00695 PF00366 Ribosomal protein S17 CDIF29688_RS00700 PF00238 Ribosomal protein L14p/L23e CDIF29688_RS00705 PF00467 KOW motif CDIF29688_RS00705 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CDIF29688_RS00710 PF00673 ribosomal L5P family C-terminus CDIF29688_RS00710 PF00281 Ribosomal protein L5 CDIF29688_RS00715 PF00253 Ribosomal protein S14p/S29e CDIF29688_RS00720 PF00410 Ribosomal protein S8 CDIF29688_RS00725 PF00347 Ribosomal protein L6 CDIF29688_RS00730 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CDIF29688_RS00735 PF00333 Ribosomal protein S5, N-terminal domain CDIF29688_RS00735 PF03719 Ribosomal protein S5, C-terminal domain CDIF29688_RS00740 PF00327 Ribosomal protein L30p/L7e CDIF29688_RS00745 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CDIF29688_RS00750 PF00344 SecY translocase CDIF29688_RS00755 PF05191 Adenylate kinase, active site lid CDIF29688_RS00760 PF00557 Metallopeptidase family M24 CDIF29688_RS00770 PF01176 Translation initiation factor 1A / IF-1 CDIF29688_RS00775 PF00444 Ribosomal protein L36 CDIF29688_RS00780 PF00416 Ribosomal protein S13/S18 CDIF29688_RS00785 PF00411 Ribosomal protein S11 CDIF29688_RS00790 PF00163 Ribosomal protein S4/S9 N-terminal domain CDIF29688_RS00790 PF01479 S4 domain CDIF29688_RS00795 PF01000 RNA polymerase Rpb3/RpoA insert domain CDIF29688_RS00795 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CDIF29688_RS00795 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CDIF29688_RS00800 PF01196 Ribosomal protein L17 CDIF29688_RS00805 PF00005 ABC transporter CDIF29688_RS00810 PF00005 ABC transporter CDIF29688_RS00815 PF02361 Cobalt transport protein CDIF29688_RS00820 PF01416 tRNA pseudouridine synthase CDIF29688_RS00825 PF00572 Ribosomal protein L13 CDIF29688_RS00830 PF00380 Ribosomal protein S9/S16 CDIF29688_RS00835 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS00970 PF00155 Aminotransferase class I and II CDIF29688_RS00975 PF13597 Anaerobic ribonucleoside-triphosphate reductase CDIF29688_RS00975 PF03477 ATP cone domain CDIF29688_RS00980 PF04055 Radical SAM superfamily CDIF29688_RS01080 PF02457 DisA bacterial checkpoint controller nucleotide-binding CDIF29688_RS01095 PF01515 Phosphate acetyl/butaryl transferase CDIF29688_RS01100 PF00871 Acetokinase family CDIF29688_RS01130 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29688_RS01130 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29688_RS01130 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29688_RS01130 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29688_RS01135 PF01380 SIS domain CDIF29688_RS01140 PF00581 Rhodanese-like domain CDIF29688_RS01150 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDIF29688_RS01155 PF08486 Stage II sporulation protein CDIF29688_RS01165 PF12116 Stage III sporulation protein D CDIF29688_RS01175 PF07977 FabA-like domain CDIF29688_RS01180 PF06866 Protein of unknown function (DUF1256) CDIF29688_RS01185 PF00438 S-adenosylmethionine synthetase, N-terminal domain CDIF29688_RS01185 PF02772 S-adenosylmethionine synthetase, central domain CDIF29688_RS01185 PF02773 S-adenosylmethionine synthetase, C-terminal domain CDIF29688_RS01195 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CDIF29688_RS01195 PF13538 UvrD-like helicase C-terminal domain CDIF29688_RS01195 PF14490 Helix-hairpin-helix containing domain CDIF29688_RS01205 PF00874 PRD domain CDIF29688_RS01205 PF05043 Mga helix-turn-helix domain CDIF29688_RS01205 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS01205 PF08279 HTH domain CDIF29688_RS01210 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29688_RS01215 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS01220 PF02378 Phosphotransferase system, EIIC CDIF29688_RS01230 PF01112 Asparaginase CDIF29688_RS01235 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS01240 PF03932 CutC family CDIF29688_RS01245 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDIF29688_RS01245 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDIF29688_RS01250 PF07517 SecA DEAD-like domain CDIF29688_RS01250 PF01043 SecA preprotein cross-linking domain CDIF29688_RS01250 PF07516 SecA Wing and Scaffold domain CDIF29688_RS01250 PF02810 SEC-C motif CDIF29688_RS01255 PF00472 RF-1 domain CDIF29688_RS01255 PF03462 PCRF domain CDIF29688_RS01260 PF00575 S1 RNA binding domain CDIF29688_RS01260 PF09371 Tex-like protein N-terminal domain CDIF29688_RS01260 PF17674 HHH domain CDIF29688_RS01260 PF16921 Tex protein YqgF-like domain CDIF29688_RS01265 PF01979 Amidohydrolase family CDIF29688_RS01280 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CDIF29688_RS01285 PF00814 Glycoprotease family CDIF29688_RS01290 PF00583 Acetyltransferase (GNAT) family CDIF29688_RS01295 PF00814 Glycoprotease family CDIF29688_RS01300 PF02901 Pyruvate formate lyase-like CDIF29688_RS01300 PF01228 Glycine radical CDIF29688_RS01305 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal CDIF29688_RS01305 PF18524 High potential iron-sulfur protein like CDIF29688_RS01310 PF04055 Radical SAM superfamily CDIF29688_RS01330 PF00005 ABC transporter CDIF29688_RS01345 PF00072 Response regulator receiver domain CDIF29688_RS01345 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS01350 PF00672 HAMP domain CDIF29688_RS01350 PF13426 PAS domain CDIF29688_RS01350 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS01350 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS01355 PF00005 ABC transporter CDIF29688_RS01355 PF02687 FtsX-like permease family CDIF29688_RS01355 PF12704 MacB-like periplasmic core domain CDIF29688_RS01370 PF13520 Amino acid permease CDIF29688_RS01375 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS01375 PF07687 Peptidase dimerisation domain CDIF29688_RS01380 PF00158 Sigma-54 interaction domain CDIF29688_RS01380 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS01380 PF13426 PAS domain CDIF29688_RS01395 PF01554 MatE CDIF29688_RS01400 PF12848 ABC transporter CDIF29688_RS01400 PF16326 ABC transporter C-terminal domain CDIF29688_RS01400 PF00005 ABC transporter CDIF29688_RS01405 PF02629 CoA binding domain CDIF29688_RS01405 PF06971 Putative DNA-binding protein N-terminus CDIF29688_RS01415 PF12838 4Fe-4S dicluster domain CDIF29688_RS01425 PF03063 Prismane/CO dehydrogenase family CDIF29688_RS01435 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS01450 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CDIF29688_RS01450 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CDIF29688_RS01455 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS01455 PF05569 BlaR1 peptidase M56 CDIF29688_RS01475 PF00877 NlpC/P60 family CDIF29688_RS01475 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CDIF29688_RS01480 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDIF29688_RS01480 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDIF29688_RS01485 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29688_RS01490 PF01180 Dihydroorotate dehydrogenase CDIF29688_RS01495 PF00156 Phosphoribosyl transferase domain CDIF29688_RS01500 PF02558 Ketopantoate reductase PanE/ApbA CDIF29688_RS01500 PF08546 Ketopantoate reductase PanE/ApbA C terminal CDIF29688_RS01505 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS01505 PF03466 LysR substrate binding domain CDIF29688_RS01510 PF03601 Conserved hypothetical protein 698 CDIF29688_RS01520 PF13091 PLD-like domain CDIF29688_RS01520 PF13396 Phospholipase_D-nuclease N-terminal CDIF29688_RS01525 PF00166 Chaperonin 10 Kd subunit CDIF29688_RS01530 PF00118 TCP-1/cpn60 chaperonin family CDIF29688_RS01535 PF00731 AIR carboxylase CDIF29688_RS01540 PF01969 Protein of unknown function DUF111 CDIF29688_RS01545 PF01969 Protein of unknown function DUF111 CDIF29688_RS01550 PF00958 GMP synthase C terminal domain CDIF29688_RS01550 PF00117 Glutamine amidotransferase class-I CDIF29688_RS01550 PF02540 NAD synthase CDIF29688_RS01565 PF03466 LysR substrate binding domain CDIF29688_RS01565 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS01585 PF00005 ABC transporter CDIF29688_RS01585 PF17760 UvrA interaction domain CDIF29688_RS01585 PF17755 UvrA DNA-binding domain CDIF29688_RS01590 PF00563 EAL domain CDIF29688_RS01590 PF00196 Bacterial regulatory proteins, luxR family CDIF29688_RS01610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS01620 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS01635 PF01797 Transposase IS200 like CDIF29688_RS01645 PF00881 Nitroreductase family CDIF29688_RS01650 PF00731 AIR carboxylase CDIF29688_RS01655 PF01259 SAICAR synthetase CDIF29688_RS01660 PF00156 Phosphoribosyl transferase domain CDIF29688_RS01665 PF00586 AIR synthase related protein, N-terminal domain CDIF29688_RS01665 PF02769 AIR synthase related protein, C-terminal domain CDIF29688_RS01670 PF00551 Formyl transferase CDIF29688_RS01675 PF01808 AICARFT/IMPCHase bienzyme CDIF29688_RS01675 PF02142 MGS-like domain CDIF29688_RS01680 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CDIF29688_RS01680 PF02843 Phosphoribosylglycinamide synthetase, C domain CDIF29688_RS01680 PF02844 Phosphoribosylglycinamide synthetase, N domain CDIF29688_RS01685 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CDIF29688_RS01685 PF02769 AIR synthase related protein, C-terminal domain CDIF29688_RS01685 PF00586 AIR synthase related protein, N-terminal domain CDIF29688_RS01690 PF04321 RmlD substrate binding domain CDIF29688_RS01695 PF00483 Nucleotidyl transferase CDIF29688_RS01700 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CDIF29688_RS01705 PF16363 GDP-mannose 4,6 dehydratase CDIF29688_RS01710 PF01464 Transglycosylase SLT domain CDIF29688_RS01720 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDIF29688_RS01745 PF02623 FliW protein CDIF29688_RS01750 PF02599 Global regulator protein family CDIF29688_RS01765 PF07195 Flagellar hook-associated protein 2 C-terminus CDIF29688_RS01765 PF02465 Flagellar hook-associated protein 2 N-terminus CDIF29688_RS01775 PF00700 Bacterial flagellin C-terminal helical region CDIF29688_RS01775 PF00669 Bacterial flagellin N-terminal helical region CDIF29688_RS01780 PF00535 Glycosyl transferase family 2 CDIF29688_RS01785 PF00535 Glycosyl transferase family 2 CDIF29688_RS01800 PF07478 D-ala D-ala ligase C-terminus CDIF29688_RS01800 PF01820 D-ala D-ala ligase N-terminus CDIF29688_RS01810 PF05523 WxcM-like, C-terminal CDIF29688_RS01815 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CDIF29688_RS01820 PF00460 Flagella basal body rod protein CDIF29688_RS01820 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29688_RS01825 PF00460 Flagella basal body rod protein CDIF29688_RS01825 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29688_RS01830 PF02049 Flagellar hook-basal body complex protein FliE CDIF29688_RS01835 PF08345 Flagellar M-ring protein C-terminal CDIF29688_RS01835 PF01514 Secretory protein of YscJ/FliF family CDIF29688_RS01840 PF14841 FliG middle domain CDIF29688_RS01840 PF14842 FliG N-terminal domain CDIF29688_RS01840 PF01706 FliG C-terminal domain CDIF29688_RS01850 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29688_RS01850 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29688_RS01850 PF18269 T3SS EscN ATPase C-terminal domain CDIF29688_RS01865 PF03963 Flagellar hook capping protein - N-terminal region CDIF29688_RS01870 PF00460 Flagella basal body rod protein CDIF29688_RS01870 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29688_RS01880 PF01618 MotA/TolQ/ExbB proton channel family CDIF29688_RS01885 PF00691 OmpA family CDIF29688_RS01885 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDIF29688_RS01900 PF00813 FliP family CDIF29688_RS01905 PF01313 Bacterial export proteins, family 3 CDIF29688_RS01910 PF01312 FlhB HrpN YscU SpaS Family CDIF29688_RS01915 PF00771 FHIPEP family CDIF29688_RS01920 PF00448 SRP54-type protein, GTPase domain CDIF29688_RS01925 PF10609 NUBPL iron-transfer P-loop NTPase CDIF29688_RS01930 PF04542 Sigma-70 region 2 CDIF29688_RS01930 PF04539 Sigma-70 region 3 CDIF29688_RS01930 PF04545 Sigma-70, region 4 CDIF29688_RS01945 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29688_RS01945 PF00460 Flagella basal body rod protein CDIF29688_RS01950 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CDIF29688_RS01950 PF00460 Flagella basal body rod protein CDIF29688_RS01960 PF04509 CheC-like family CDIF29688_RS01960 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CDIF29688_RS01970 PF00183 Hsp90 protein CDIF29688_RS01975 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS01980 PF04055 Radical SAM superfamily CDIF29688_RS01985 PF12833 Helix-turn-helix domain CDIF29688_RS01995 PF01638 HxlR-like helix-turn-helix CDIF29688_RS02020 PF03610 PTS system fructose IIA component CDIF29688_RS02020 PF00874 PRD domain CDIF29688_RS02020 PF00158 Sigma-54 interaction domain CDIF29688_RS02025 PF00874 PRD domain CDIF29688_RS02025 PF00158 Sigma-54 interaction domain CDIF29688_RS02025 PF03610 PTS system fructose IIA component CDIF29688_RS02040 PF03830 PTS system sorbose subfamily IIB component CDIF29688_RS02045 PF03609 PTS system sorbose-specific iic component CDIF29688_RS02050 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29688_RS02060 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS02085 PF04439 Streptomycin adenylyltransferase CDIF29688_RS02120 PF01076 Plasmid recombination enzyme CDIF29688_RS02140 PF13396 Phospholipase_D-nuclease N-terminal CDIF29688_RS02145 PF13732 Domain of unknown function (DUF4162) CDIF29688_RS02145 PF00005 ABC transporter CDIF29688_RS02165 PF04055 Radical SAM superfamily CDIF29688_RS02165 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29688_RS02170 PF00356 Bacterial regulatory proteins, lacI family CDIF29688_RS02175 PF00294 pfkB family carbohydrate kinase CDIF29688_RS02180 PF13407 Periplasmic binding protein domain CDIF29688_RS02185 PF00005 ABC transporter CDIF29688_RS02190 PF02653 Branched-chain amino acid transport system / permease component CDIF29688_RS02195 PF07687 Peptidase dimerisation domain CDIF29688_RS02195 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS02205 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS02245 PF01022 Bacterial regulatory protein, arsR family CDIF29688_RS02250 PF00403 Heavy-metal-associated domain CDIF29688_RS02270 PF09335 SNARE associated Golgi protein CDIF29688_RS02290 PF00005 ABC transporter CDIF29688_RS02300 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS02300 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS02305 PF00072 Response regulator receiver domain CDIF29688_RS02305 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS02325 PF01891 Cobalt uptake substrate-specific transmembrane region CDIF29688_RS02330 PF02553 Cobalt transport protein component CbiN CDIF29688_RS02335 PF02361 Cobalt transport protein CDIF29688_RS02340 PF00005 ABC transporter CDIF29688_RS02345 PF13361 UvrD-like helicase C-terminal domain CDIF29688_RS02345 PF00580 UvrD/REP helicase N-terminal domain CDIF29688_RS02350 PF02127 Aminopeptidase I zinc metalloprotease (M18) CDIF29688_RS02360 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CDIF29688_RS02370 PF07085 DRTGG domain CDIF29688_RS02370 PF02833 DHHA2 domain CDIF29688_RS02370 PF01368 DHH family CDIF29688_RS02370 PF00571 CBS domain CDIF29688_RS02385 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS02385 PF16123 Hydroxyacylglutathione hydrolase C-terminus CDIF29688_RS02390 PF04607 Region found in RelA / SpoT proteins CDIF29688_RS02435 PF02378 Phosphotransferase system, EIIC CDIF29688_RS02435 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS02435 PF00367 phosphotransferase system, EIIB CDIF29688_RS02440 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS02445 PF00874 PRD domain CDIF29688_RS02445 PF03123 CAT RNA binding domain CDIF29688_RS02455 PF13537 Glutamine amidotransferase domain CDIF29688_RS02455 PF00733 Asparagine synthase CDIF29688_RS02470 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDIF29688_RS02470 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDIF29688_RS02475 PF02515 CoA-transferase family III CDIF29688_RS02480 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29688_RS02485 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29688_RS02490 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29688_RS02495 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29688_RS02495 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29688_RS02495 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29688_RS02500 PF01012 Electron transfer flavoprotein domain CDIF29688_RS02505 PF13237 4Fe-4S dicluster domain CDIF29688_RS02505 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29688_RS02505 PF01012 Electron transfer flavoprotein domain CDIF29688_RS02510 PF13188 PAS domain CDIF29688_RS02510 PF00158 Sigma-54 interaction domain CDIF29688_RS02510 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS02515 PF01116 Fructose-bisphosphate aldolase class-II CDIF29688_RS02525 PF01479 S4 domain CDIF29688_RS02525 PF00849 RNA pseudouridylate synthase CDIF29688_RS02530 PF05958 tRNA (Uracil-5-)-methyltransferase CDIF29688_RS02555 PF02920 DNA binding domain of tn916 integrase CDIF29688_RS02555 PF00589 Phage integrase family CDIF29688_RS02560 PF09035 Excisionase from transposon Tn916 CDIF29688_RS02590 PF00664 ABC transporter transmembrane region CDIF29688_RS02590 PF00005 ABC transporter CDIF29688_RS02615 PF04055 Radical SAM superfamily CDIF29688_RS02635 PF03432 Relaxase/Mobilisation nuclease domain CDIF29688_RS02685 PF01348 Type II intron maturase CDIF29688_RS02685 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDIF29688_RS02735 PF17762 HTH domain found in ParB protein CDIF29688_RS02735 PF02195 ParB-like nuclease domain CDIF29688_RS02740 PF06445 GyrI-like small molecule binding domain CDIF29688_RS02740 PF12833 Helix-turn-helix domain CDIF29688_RS02750 PF00877 NlpC/P60 family CDIF29688_RS02795 PF01348 Type II intron maturase CDIF29688_RS02795 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CDIF29688_RS02805 PF18106 Rolling Circle replication initiation protein N-terminal domain CDIF29688_RS02805 PF02486 Replication initiation factor CDIF29688_RS02825 PF01381 Helix-turn-helix CDIF29688_RS02860 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS02860 PF00158 Sigma-54 interaction domain CDIF29688_RS02860 PF13426 PAS domain CDIF29688_RS02875 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS02880 PF16552 D-ornithine 4,5-aminomutase alpha-subunit CDIF29688_RS02885 PF02310 B12 binding domain CDIF29688_RS02885 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CDIF29688_RS02885 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CDIF29688_RS02890 PF13941 MutL protein CDIF29688_RS02895 PF01168 Alanine racemase, N-terminal domain CDIF29688_RS02900 PF03553 Na+/H+ antiporter family CDIF29688_RS02915 PF12833 Helix-turn-helix domain CDIF29688_RS02920 PF13538 UvrD-like helicase C-terminal domain CDIF29688_RS02925 PF17755 UvrA DNA-binding domain CDIF29688_RS02925 PF00005 ABC transporter CDIF29688_RS02925 PF17760 UvrA interaction domain CDIF29688_RS02935 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS02940 PF00005 ABC transporter CDIF29688_RS02950 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS02950 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS02950 PF00989 PAS fold CDIF29688_RS02955 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS02955 PF00072 Response regulator receiver domain CDIF29688_RS02960 PF17754 MftR C-terminal domain CDIF29688_RS02960 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS02975 PF00005 ABC transporter CDIF29688_RS02990 PF01418 Helix-turn-helix domain, rpiR family CDIF29688_RS02990 PF01380 SIS domain CDIF29688_RS03005 PF00128 Alpha amylase, catalytic domain CDIF29688_RS03010 PF02378 Phosphotransferase system, EIIC CDIF29688_RS03010 PF00367 phosphotransferase system, EIIB CDIF29688_RS03010 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS03015 PF05569 BlaR1 peptidase M56 CDIF29688_RS03015 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS03020 PF03965 Penicillinase repressor CDIF29688_RS03025 PF03358 NADPH-dependent FMN reductase CDIF29688_RS03055 PF00005 ABC transporter CDIF29688_RS03070 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS03070 PF00072 Response regulator receiver domain CDIF29688_RS03075 PF13426 PAS domain CDIF29688_RS03075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS03075 PF00672 HAMP domain CDIF29688_RS03075 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS03080 PF00005 ABC transporter CDIF29688_RS03080 PF02687 FtsX-like permease family CDIF29688_RS03080 PF12704 MacB-like periplasmic core domain CDIF29688_RS03085 PF00005 ABC transporter CDIF29688_RS03090 PF01066 CDP-alcohol phosphatidyltransferase CDIF29688_RS03095 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS03095 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS03100 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS03100 PF00072 Response regulator receiver domain CDIF29688_RS03105 PF00795 Carbon-nitrogen hydrolase CDIF29688_RS03110 PF00893 Small Multidrug Resistance protein CDIF29688_RS03115 PF01259 SAICAR synthetase CDIF29688_RS03120 PF00107 Zinc-binding dehydrogenase CDIF29688_RS03120 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29688_RS03130 PF03830 PTS system sorbose subfamily IIB component CDIF29688_RS03140 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29688_RS03160 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29688_RS03160 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS03165 PF00158 Sigma-54 interaction domain CDIF29688_RS03165 PF03610 PTS system fructose IIA component CDIF29688_RS03165 PF00874 PRD domain CDIF29688_RS03185 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS03185 PF13493 Domain of unknown function (DUF4118) CDIF29688_RS03185 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS03185 PF02702 Osmosensitive K+ channel His kinase sensor domain CDIF29688_RS03190 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS03190 PF00072 Response regulator receiver domain CDIF29688_RS03200 PF00563 EAL domain CDIF29688_RS03200 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS03200 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS03210 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS03210 PF07687 Peptidase dimerisation domain CDIF29688_RS03215 PF03806 AbgT putative transporter family CDIF29688_RS03240 PF08279 HTH domain CDIF29688_RS03240 PF13280 WYL domain CDIF29688_RS03250 PF00072 Response regulator receiver domain CDIF29688_RS03255 PF04509 CheC-like family CDIF29688_RS03260 PF03975 CheD chemotactic sensory transduction CDIF29688_RS03265 PF01584 CheW-like domain CDIF29688_RS03270 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS03270 PF00072 Response regulator receiver domain CDIF29688_RS03275 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CDIF29688_RS03275 PF02203 Tar ligand binding domain homologue CDIF29688_RS03275 PF00672 HAMP domain CDIF29688_RS03280 PF01627 Hpt domain CDIF29688_RS03280 PF07194 P2 response regulator binding domain CDIF29688_RS03280 PF01584 CheW-like domain CDIF29688_RS03280 PF02895 Signal transducing histidine kinase, homodimeric domain CDIF29688_RS03280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS03285 PF01584 CheW-like domain CDIF29688_RS03290 PF01739 CheR methyltransferase, SAM binding domain CDIF29688_RS03290 PF03705 CheR methyltransferase, all-alpha domain CDIF29688_RS03295 PF01339 CheB methylesterase CDIF29688_RS03295 PF00072 Response regulator receiver domain CDIF29688_RS03305 PF02423 Ornithine cyclodeaminase/mu-crystallin family CDIF29688_RS03320 PF03965 Penicillinase repressor CDIF29688_RS03325 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS03325 PF05569 BlaR1 peptidase M56 CDIF29688_RS03345 PF13367 PrsW family intramembrane metalloprotease CDIF29688_RS03350 PF01189 16S rRNA methyltransferase RsmB/F CDIF29688_RS03350 PF17126 RsmF rRNA methyltransferase first C-terminal domain CDIF29688_RS03350 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CDIF29688_RS03355 PF10502 Signal peptidase, peptidase S26 CDIF29688_RS03360 PF10502 Signal peptidase, peptidase S26 CDIF29688_RS03370 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29688_RS03370 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29688_RS03370 PF03129 Anticodon binding domain CDIF29688_RS03375 PF04960 Glutaminase CDIF29688_RS03385 PF01261 Xylose isomerase-like TIM barrel CDIF29688_RS03405 PF08331 Domain of unknown function (DUF1730) CDIF29688_RS03410 PF13654 AAA domain CDIF29688_RS03410 PF05362 Lon protease (S16) C-terminal proteolytic domain CDIF29688_RS03415 PF00633 Helix-hairpin-helix motif CDIF29688_RS03415 PF00730 HhH-GPD superfamily base excision DNA repair protein CDIF29688_RS03415 PF10576 Iron-sulfur binding domain of endonuclease III CDIF29688_RS03420 PF00588 SpoU rRNA Methylase family CDIF29688_RS03425 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29688_RS03430 PF02608 ABC transporter substrate-binding protein PnrA-like CDIF29688_RS03435 PF02608 ABC transporter substrate-binding protein PnrA-like CDIF29688_RS03450 PF04286 Protein of unknown function (DUF445) CDIF29688_RS03455 PF02824 TGS domain CDIF29688_RS03455 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29688_RS03455 PF03129 Anticodon binding domain CDIF29688_RS03455 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29688_RS03490 PF00171 Aldehyde dehydrogenase family CDIF29688_RS03495 PF17932 Tetracyclin repressor-like, C-terminal domain CDIF29688_RS03495 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS03500 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDIF29688_RS03500 PF00391 PEP-utilising enzyme, mobile domain CDIF29688_RS03510 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS03510 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS03510 PF00563 EAL domain CDIF29688_RS03515 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS03515 PF17151 Periplasmic sensor domain CDIF29688_RS03520 PF17151 Periplasmic sensor domain CDIF29688_RS03520 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS03550 PF17854 FtsK alpha domain CDIF29688_RS03550 PF09397 Ftsk gamma domain CDIF29688_RS03550 PF01580 FtsK/SpoIIIE family CDIF29688_RS03575 PF11922 Domain of unknown function (DUF3440) CDIF29688_RS03575 PF01507 Phosphoadenosine phosphosulfate reductase family CDIF29688_RS03580 PF02195 ParB-like nuclease domain CDIF29688_RS03595 PF05067 Manganese containing catalase CDIF29688_RS03610 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CDIF29688_RS03610 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CDIF29688_RS03630 PF04229 GrpB protein CDIF29688_RS03650 PF00654 Voltage gated chloride channel CDIF29688_RS03670 PF00072 Response regulator receiver domain CDIF29688_RS03670 PF04397 LytTr DNA-binding domain CDIF29688_RS03675 PF02687 FtsX-like permease family CDIF29688_RS03680 PF00005 ABC transporter CDIF29688_RS03700 PF13411 MerR HTH family regulatory protein CDIF29688_RS03700 PF06445 GyrI-like small molecule binding domain CDIF29688_RS03745 PF00772 DnaB-like helicase N terminal domain CDIF29688_RS03745 PF03796 DnaB-like helicase C terminal domain CDIF29688_RS03765 PF00027 Cyclic nucleotide-binding domain CDIF29688_RS03765 PF13545 Crp-like helix-turn-helix domain CDIF29688_RS03785 PF08713 DNA alkylation repair enzyme CDIF29688_RS03795 PF12697 Alpha/beta hydrolase family CDIF29688_RS03840 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS03840 PF00072 Response regulator receiver domain CDIF29688_RS03845 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS03845 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS03850 PF00005 ABC transporter CDIF29688_RS03865 PF07729 FCD domain CDIF29688_RS03865 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS03870 PF07676 WD40-like Beta Propeller Repeat CDIF29688_RS03870 PF00326 Prolyl oligopeptidase family CDIF29688_RS03875 PF00326 Prolyl oligopeptidase family CDIF29688_RS03875 PF07676 WD40-like Beta Propeller Repeat CDIF29688_RS03895 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS03895 PF00155 Aminotransferase class I and II CDIF29688_RS03900 PF00005 ABC transporter CDIF29688_RS03915 PF00654 Voltage gated chloride channel CDIF29688_RS03955 PF00005 ABC transporter CDIF29688_RS03960 PF00072 Response regulator receiver domain CDIF29688_RS03960 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS03965 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS03965 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS04005 PF08281 Sigma-70, region 4 CDIF29688_RS04005 PF04542 Sigma-70 region 2 CDIF29688_RS04025 PF00083 Sugar (and other) transporter CDIF29688_RS04030 PF00474 Sodium:solute symporter family CDIF29688_RS04035 PF00356 Bacterial regulatory proteins, lacI family CDIF29688_RS04040 PF01434 Peptidase family M41 CDIF29688_RS04040 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS04040 PF17862 AAA+ lid domain CDIF29688_RS04045 PF05198 Translation initiation factor IF-3, N-terminal domain CDIF29688_RS04045 PF00707 Translation initiation factor IF-3, C-terminal domain CDIF29688_RS04050 PF01632 Ribosomal protein L35 CDIF29688_RS04055 PF00453 Ribosomal protein L20 CDIF29688_RS04090 PF00376 MerR family regulatory protein CDIF29688_RS04090 PF09278 MerR, DNA binding CDIF29688_RS04110 PF02386 Cation transport protein CDIF29688_RS04115 PF02254 TrkA-N domain CDIF29688_RS04115 PF02080 TrkA-C domain CDIF29688_RS04120 PF00588 SpoU rRNA Methylase family CDIF29688_RS04120 PF08032 RNA 2'-O ribose methyltransferase substrate binding CDIF29688_RS04125 PF01409 tRNA synthetases class II core domain (F) CDIF29688_RS04125 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CDIF29688_RS04130 PF03147 Ferredoxin-fold anticodon binding domain CDIF29688_RS04130 PF01588 Putative tRNA binding domain CDIF29688_RS04130 PF03484 tRNA synthetase B5 domain CDIF29688_RS04130 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDIF29688_RS04130 PF03483 B3/4 domain CDIF29688_RS04145 PF01136 Peptidase family U32 CDIF29688_RS04145 PF12392 Collagenase CDIF29688_RS04155 PF00293 NUDIX domain CDIF29688_RS04165 PF05230 MASE2 domain CDIF29688_RS04165 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS04170 PF07687 Peptidase dimerisation domain CDIF29688_RS04170 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS04175 PF00488 MutS domain V CDIF29688_RS04175 PF01713 Smr domain CDIF29688_RS04180 PF04463 Protein of unknown function (DUF523) CDIF29688_RS04185 PF00750 tRNA synthetases class I (R) CDIF29688_RS04185 PF05746 DALR anticodon binding domain CDIF29688_RS04185 PF03485 Arginyl tRNA synthetase N terminal domain CDIF29688_RS04200 PF04055 Radical SAM superfamily CDIF29688_RS04200 PF02310 B12 binding domain CDIF29688_RS04215 PF01515 Phosphate acetyl/butaryl transferase CDIF29688_RS04220 PF03063 Prismane/CO dehydrogenase family CDIF29688_RS04225 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29688_RS04230 PF01268 Formate--tetrahydrofolate ligase CDIF29688_RS04235 PF04961 Formiminotransferase-cyclodeaminase CDIF29688_RS04240 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CDIF29688_RS04240 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CDIF29688_RS04250 PF02574 Homocysteine S-methyltransferase CDIF29688_RS04250 PF02219 Methylenetetrahydrofolate reductase CDIF29688_RS04255 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29688_RS04255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS04265 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CDIF29688_RS04270 PF04060 Putative Fe-S cluster CDIF29688_RS04270 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CDIF29688_RS04275 PF00809 Pterin binding enzyme CDIF29688_RS04280 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CDIF29688_RS04280 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CDIF29688_RS04285 PF01597 Glycine cleavage H-protein CDIF29688_RS04300 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29688_RS04300 PF04055 Radical SAM superfamily CDIF29688_RS04305 PF03099 Biotin/lipoate A/B protein ligase family CDIF29688_RS04325 PF02811 PHP domain CDIF29688_RS04340 PF00266 Aminotransferase class-V CDIF29688_RS04340 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS04345 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29688_RS04345 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29688_RS04350 PF04346 Ethanolamine utilisation protein, EutH CDIF29688_RS04355 PF00455 DeoR C terminal sensor domain CDIF29688_RS04355 PF08220 DeoR-like helix-turn-helix domain CDIF29688_RS04365 PF01618 MotA/TolQ/ExbB proton channel family CDIF29688_RS04370 PF13677 Membrane MotB of proton-channel complex MotA/MotB CDIF29688_RS04370 PF00691 OmpA family CDIF29688_RS04385 PF00563 EAL domain CDIF29688_RS04385 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS04385 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS04390 PF00580 UvrD/REP helicase N-terminal domain CDIF29688_RS04390 PF13361 UvrD-like helicase C-terminal domain CDIF29688_RS04395 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29688_RS04400 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS04405 PF00005 ABC transporter CDIF29688_RS04410 PF00266 Aminotransferase class-V CDIF29688_RS04415 PF02926 THUMP domain CDIF29688_RS04415 PF02568 Thiamine biosynthesis protein (ThiI) CDIF29688_RS04420 PF07963 Prokaryotic N-terminal methylation motif CDIF29688_RS04420 PF00114 Pilin (bacterial filament) CDIF29688_RS04425 PF00881 Nitroreductase family CDIF29688_RS04430 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS04430 PF00563 EAL domain CDIF29688_RS04430 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS04435 PF04055 Radical SAM superfamily CDIF29688_RS04440 PF02901 Pyruvate formate lyase-like CDIF29688_RS04440 PF01228 Glycine radical CDIF29688_RS04445 PF01699 Sodium/calcium exchanger protein CDIF29688_RS04450 PF00271 Helicase conserved C-terminal domain CDIF29688_RS04450 PF00270 DEAD/DEAH box helicase CDIF29688_RS04455 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDIF29688_RS04455 PF00384 Molybdopterin oxidoreductase CDIF29688_RS04455 PF01568 Molydopterin dinucleotide binding domain CDIF29688_RS04460 PF01740 STAS domain CDIF29688_RS04465 PF13581 Histidine kinase-like ATPase domain CDIF29688_RS04470 PF04545 Sigma-70, region 4 CDIF29688_RS04470 PF04542 Sigma-70 region 2 CDIF29688_RS04470 PF04539 Sigma-70 region 3 CDIF29688_RS04475 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CDIF29688_RS04480 PF07451 Stage V sporulation protein AD (SpoVAD) CDIF29688_RS04490 PF00356 Bacterial regulatory proteins, lacI family CDIF29688_RS04505 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS04515 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS04515 PF00912 Transglycosylase CDIF29688_RS04525 PF05580 SpoIVB peptidase S55 CDIF29688_RS04525 PF17820 PDZ domain CDIF29688_RS04530 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS04530 PF08239 Bacterial SH3 domain CDIF29688_RS04535 PF12848 ABC transporter CDIF29688_RS04535 PF00005 ABC transporter CDIF29688_RS04550 PF16360 GTP-binding GTPase Middle Region CDIF29688_RS04550 PF13167 GTP-binding GTPase N-terminal CDIF29688_RS04550 PF01926 50S ribosome-binding GTPase CDIF29688_RS04565 PF09186 Domain of unknown function (DUF1949) CDIF29688_RS04565 PF01205 Uncharacterized protein family UPF0029 CDIF29688_RS04575 PF01925 Sulfite exporter TauE/SafE CDIF29688_RS04580 PF02540 NAD synthase CDIF29688_RS04585 PF01709 Transcriptional regulator CDIF29688_RS04590 PF00356 Bacterial regulatory proteins, lacI family CDIF29688_RS04595 PF00682 HMGL-like CDIF29688_RS04605 PF02515 CoA-transferase family III CDIF29688_RS04610 PF00378 Enoyl-CoA hydratase/isomerase CDIF29688_RS04620 PF02515 CoA-transferase family III CDIF29688_RS04625 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29688_RS04625 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29688_RS04625 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29688_RS04630 PF01012 Electron transfer flavoprotein domain CDIF29688_RS04635 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29688_RS04635 PF01012 Electron transfer flavoprotein domain CDIF29688_RS04635 PF13237 4Fe-4S dicluster domain CDIF29688_RS04640 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS04640 PF00158 Sigma-54 interaction domain CDIF29688_RS04640 PF13426 PAS domain CDIF29688_RS04660 PF12724 Flavodoxin domain CDIF29688_RS04665 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS04665 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS04665 PF00563 EAL domain CDIF29688_RS04680 PF07729 FCD domain CDIF29688_RS04680 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS04685 PF07690 Major Facilitator Superfamily CDIF29688_RS04690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS04690 PF00367 phosphotransferase system, EIIB CDIF29688_RS04690 PF02378 Phosphotransferase system, EIIC CDIF29688_RS04695 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS04700 PF00874 PRD domain CDIF29688_RS04700 PF03123 CAT RNA binding domain CDIF29688_RS04705 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS04705 PF00072 Response regulator receiver domain CDIF29688_RS04710 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS04710 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS04715 PF00005 ABC transporter CDIF29688_RS04730 PF02915 Rubrerythrin CDIF29688_RS04740 PF01880 Desulfoferrodoxin CDIF29688_RS04745 PF01645 Conserved region in glutamate synthase CDIF29688_RS04760 PF00270 DEAD/DEAH box helicase CDIF29688_RS04760 PF00271 Helicase conserved C-terminal domain CDIF29688_RS04765 PF00682 HMGL-like CDIF29688_RS04770 PF00330 Aconitase family (aconitate hydratase) CDIF29688_RS04775 PF18324 Hypothetical protein TT1725 CDIF29688_RS04775 PF00180 Isocitrate/isopropylmalate dehydrogenase CDIF29688_RS04780 PF01047 MarR family CDIF29688_RS04805 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDIF29688_RS04810 PF02142 MGS-like domain CDIF29688_RS04810 PF01808 AICARFT/IMPCHase bienzyme CDIF29688_RS04820 PF13439 Glycosyltransferase Family 4 CDIF29688_RS04820 PF00534 Glycosyl transferases group 1 CDIF29688_RS04850 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS04855 PF01106 NifU-like domain CDIF29688_RS04870 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS04875 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS04875 PF12911 N-terminal TM domain of oligopeptide transport permease C CDIF29688_RS04880 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29688_RS04885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29688_RS04885 PF00005 ABC transporter CDIF29688_RS04890 PF00005 ABC transporter CDIF29688_RS04890 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29688_RS04895 PF03610 PTS system fructose IIA component CDIF29688_RS04895 PF00158 Sigma-54 interaction domain CDIF29688_RS04895 PF00874 PRD domain CDIF29688_RS04905 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS04910 PF02378 Phosphotransferase system, EIIC CDIF29688_RS04920 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29688_RS04920 PF02056 Family 4 glycosyl hydrolase CDIF29688_RS04925 PF01661 Macro domain CDIF29688_RS04930 PF12146 Serine aminopeptidase, S33 CDIF29688_RS04940 PF12728 Helix-turn-helix domain CDIF29688_RS04940 PF12727 PBP superfamily domain CDIF29688_RS04950 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS04955 PF12857 TOBE-like domain CDIF29688_RS04955 PF00005 ABC transporter CDIF29688_RS04955 PF17850 CysA C-terminal regulatory domain CDIF29688_RS04960 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29688_RS04960 PF12464 Maltose acetyltransferase CDIF29688_RS04970 PF00005 ABC transporter CDIF29688_RS04970 PF09383 NIL domain CDIF29688_RS04975 PF02653 Branched-chain amino acid transport system / permease component CDIF29688_RS04980 PF04392 ABC transporter substrate binding protein CDIF29688_RS04985 PF00005 ABC transporter CDIF29688_RS04990 PF02653 Branched-chain amino acid transport system / permease component CDIF29688_RS04995 PF01256 Carbohydrate kinase CDIF29688_RS04995 PF03853 YjeF-related protein N-terminus CDIF29688_RS05005 PF01145 SPFH domain / Band 7 family CDIF29688_RS05010 PF00483 Nucleotidyl transferase CDIF29688_RS05015 PF00483 Nucleotidyl transferase CDIF29688_RS05020 PF00534 Glycosyl transferases group 1 CDIF29688_RS05020 PF08323 Starch synthase catalytic domain CDIF29688_RS05025 PF00343 Carbohydrate phosphorylase CDIF29688_RS05030 PF02903 Alpha amylase, N-terminal ig-like domain CDIF29688_RS05030 PF00395 S-layer homology domain CDIF29688_RS05030 PF00128 Alpha amylase, catalytic domain CDIF29688_RS05035 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS05035 PF07729 FCD domain CDIF29688_RS05045 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDIF29688_RS05045 PF01276 Orn/Lys/Arg decarboxylase, major domain CDIF29688_RS05050 PF02675 S-adenosylmethionine decarboxylase CDIF29688_RS05055 PF17284 Spermidine synthase tetramerisation domain CDIF29688_RS05060 PF00491 Arginase family CDIF29688_RS05065 PF00313 'Cold-shock' DNA-binding domain CDIF29688_RS05075 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29688_RS05075 PF13187 4Fe-4S dicluster domain CDIF29688_RS05095 PF08903 Domain of unknown function (DUF1846) CDIF29688_RS05100 PF11798 IMS family HHH motif CDIF29688_RS05100 PF00817 impB/mucB/samB family CDIF29688_RS05100 PF11799 impB/mucB/samB family C-terminal domain CDIF29688_RS05105 PF00571 CBS domain CDIF29688_RS05105 PF00005 ABC transporter CDIF29688_RS05110 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS05115 PF16916 Dimerisation domain of Zinc Transporter CDIF29688_RS05115 PF01545 Cation efflux family CDIF29688_RS05145 PF01554 MatE CDIF29688_RS05150 PF02401 LytB protein CDIF29688_RS05150 PF00575 S1 RNA binding domain CDIF29688_RS05165 PF08502 LeuA allosteric (dimerisation) domain CDIF29688_RS05165 PF00682 HMGL-like CDIF29688_RS05170 PF00330 Aconitase family (aconitate hydratase) CDIF29688_RS05175 PF00694 Aconitase C-terminal domain CDIF29688_RS05180 PF00180 Isocitrate/isopropylmalate dehydrogenase CDIF29688_RS05190 PF00266 Aminotransferase class-V CDIF29688_RS05195 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CDIF29688_RS05195 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CDIF29688_RS05210 PF13426 PAS domain CDIF29688_RS05210 PF08447 PAS fold CDIF29688_RS05210 PF05231 MASE1 CDIF29688_RS05210 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS05210 PF00563 EAL domain CDIF29688_RS05210 PF08448 PAS fold CDIF29688_RS05215 PF04055 Radical SAM superfamily CDIF29688_RS05215 PF11842 Domain of unknown function (DUF3362) CDIF29688_RS05215 PF08497 Radical SAM N-terminal CDIF29688_RS05230 PF00005 ABC transporter CDIF29688_RS05235 PF04073 Aminoacyl-tRNA editing domain CDIF29688_RS05240 PF05681 Fumarate hydratase (Fumerase) CDIF29688_RS05250 PF00390 Malic enzyme, N-terminal domain CDIF29688_RS05250 PF03949 Malic enzyme, NAD binding domain CDIF29688_RS05270 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS05270 PF07702 UTRA domain CDIF29688_RS05275 PF01979 Amidohydrolase family CDIF29688_RS05280 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CDIF29688_RS05290 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS05290 PF00072 Response regulator receiver domain CDIF29688_RS05300 PF00563 EAL domain CDIF29688_RS05300 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS05300 PF13426 PAS domain CDIF29688_RS05310 PF06445 GyrI-like small molecule binding domain CDIF29688_RS05310 PF13411 MerR HTH family regulatory protein CDIF29688_RS05315 PF00005 ABC transporter CDIF29688_RS05315 PF00664 ABC transporter transmembrane region CDIF29688_RS05320 PF00664 ABC transporter transmembrane region CDIF29688_RS05320 PF00005 ABC transporter CDIF29688_RS05350 PF00005 ABC transporter CDIF29688_RS05350 PF08402 TOBE domain CDIF29688_RS05355 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS05360 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS05365 PF13416 Bacterial extracellular solute-binding protein CDIF29688_RS05375 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CDIF29688_RS05385 PF03170 Bacterial cellulose synthase subunit CDIF29688_RS05395 PF02350 UDP-N-acetylglucosamine 2-epimerase CDIF29688_RS05400 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29688_RS05400 PF01476 LysM domain CDIF29688_RS05425 PF08239 Bacterial SH3 domain CDIF29688_RS05425 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS05430 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS05430 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS05440 PF13361 UvrD-like helicase C-terminal domain CDIF29688_RS05440 PF00580 UvrD/REP helicase N-terminal domain CDIF29688_RS05450 PF12705 PD-(D/E)XK nuclease superfamily CDIF29688_RS05455 PF00580 UvrD/REP helicase N-terminal domain CDIF29688_RS05455 PF13361 UvrD-like helicase C-terminal domain CDIF29688_RS05455 PF12705 PD-(D/E)XK nuclease superfamily CDIF29688_RS05460 PF12320 Type 5 capsule protein repressor C-terminal domain CDIF29688_RS05460 PF00149 Calcineurin-like phosphoesterase CDIF29688_RS05465 PF13175 AAA ATPase domain CDIF29688_RS05470 PF01595 Cyclin M transmembrane N-terminal domain CDIF29688_RS05470 PF00571 CBS domain CDIF29688_RS05470 PF03471 Transporter associated domain CDIF29688_RS05475 PF01594 AI-2E family transporter CDIF29688_RS05480 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS05480 PF07687 Peptidase dimerisation domain CDIF29688_RS05490 PF12850 Calcineurin-like phosphoesterase superfamily domain CDIF29688_RS05495 PF01513 ATP-NAD kinase CDIF29688_RS05500 PF00005 ABC transporter CDIF29688_RS05520 PF04073 Aminoacyl-tRNA editing domain CDIF29688_RS05525 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CDIF29688_RS05525 PF02770 Acyl-CoA dehydrogenase, middle domain CDIF29688_RS05525 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CDIF29688_RS05530 PF01012 Electron transfer flavoprotein domain CDIF29688_RS05535 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29688_RS05535 PF01012 Electron transfer flavoprotein domain CDIF29688_RS05540 PF00378 Enoyl-CoA hydratase/isomerase CDIF29688_RS05545 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CDIF29688_RS05545 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CDIF29688_RS05550 PF00108 Thiolase, N-terminal domain CDIF29688_RS05550 PF02803 Thiolase, C-terminal domain CDIF29688_RS05555 PF01479 S4 domain CDIF29688_RS05555 PF00849 RNA pseudouridylate synthase CDIF29688_RS05565 PF00550 Phosphopantetheine attachment site CDIF29688_RS05590 PF00356 Bacterial regulatory proteins, lacI family CDIF29688_RS05620 PF02811 PHP domain CDIF29688_RS05625 PF00155 Aminotransferase class I and II CDIF29688_RS05630 PF05979 Bacterial protein of unknown function (DUF896) CDIF29688_RS05635 PF02127 Aminopeptidase I zinc metalloprotease (M18) CDIF29688_RS05645 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29688_RS05645 PF00589 Phage integrase family CDIF29688_RS05660 PF01381 Helix-turn-helix CDIF29688_RS05670 PF03374 Phage antirepressor protein KilAC domain CDIF29688_RS05670 PF09669 Phage regulatory protein Rha (Phage_pRha) CDIF29688_RS05685 PF02498 BRO family, N-terminal domain CDIF29688_RS05685 PF10548 P22AR C-terminal domain CDIF29688_RS05695 PF01381 Helix-turn-helix CDIF29688_RS05745 PF00436 Single-strand binding protein family CDIF29688_RS05770 PF00145 C-5 cytosine-specific DNA methylase CDIF29688_RS05810 PF05866 Endodeoxyribonuclease RusA CDIF29688_RS05850 PF10668 Phage terminase small subunit CDIF29688_RS05860 PF00919 Uncharacterized protein family UPF0004 CDIF29688_RS05860 PF01938 TRAM domain CDIF29688_RS05860 PF04055 Radical SAM superfamily CDIF29688_RS05920 PF09393 Phage tail tube protein CDIF29688_RS05965 PF00877 NlpC/P60 family CDIF29688_RS05975 PF10934 Protein of unknown function (DUF2634) CDIF29688_RS05980 PF04865 Baseplate J-like protein CDIF29688_RS06025 PF05105 Bacteriophage holin family CDIF29688_RS06030 PF08460 Bacterial SH3 domain CDIF29688_RS06030 PF05257 CHAP domain CDIF29688_RS06030 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS06090 PF03830 PTS system sorbose subfamily IIB component CDIF29688_RS06095 PF03609 PTS system sorbose-specific iic component CDIF29688_RS06100 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29688_RS06105 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS06105 PF03466 LysR substrate binding domain CDIF29688_RS06115 PF03453 MoeA N-terminal region (domain I and II) CDIF29688_RS06115 PF03454 MoeA C-terminal region (domain IV) CDIF29688_RS06115 PF00994 Probable molybdopterin binding domain CDIF29688_RS06120 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CDIF29688_RS06125 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS06130 PF00664 ABC transporter transmembrane region CDIF29688_RS06130 PF00005 ABC transporter CDIF29688_RS06140 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS06140 PF07687 Peptidase dimerisation domain CDIF29688_RS06145 PF02535 ZIP Zinc transporter CDIF29688_RS06155 PF04397 LytTr DNA-binding domain CDIF29688_RS06155 PF00072 Response regulator receiver domain CDIF29688_RS06170 PF01228 Glycine radical CDIF29688_RS06170 PF02901 Pyruvate formate lyase-like CDIF29688_RS06175 PF04055 Radical SAM superfamily CDIF29688_RS06175 PF13187 4Fe-4S dicluster domain CDIF29688_RS06180 PF07883 Cupin domain CDIF29688_RS06180 PF01381 Helix-turn-helix CDIF29688_RS06205 PF06445 GyrI-like small molecule binding domain CDIF29688_RS06205 PF12833 Helix-turn-helix domain CDIF29688_RS06225 PF01367 5'-3' exonuclease, C-terminal SAM fold CDIF29688_RS06225 PF00476 DNA polymerase family A CDIF29688_RS06225 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CDIF29688_RS06230 PF01121 Dephospho-CoA kinase CDIF29688_RS06240 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29688_RS06255 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29688_RS06260 PF00877 NlpC/P60 family CDIF29688_RS06270 PF10531 SLBB domain CDIF29688_RS06270 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29688_RS06270 PF13375 RnfC Barrel sandwich hybrid domain CDIF29688_RS06270 PF13237 4Fe-4S dicluster domain CDIF29688_RS06275 PF03116 NQR2, RnfD, RnfE family CDIF29688_RS06280 PF04205 FMN-binding domain CDIF29688_RS06285 PF02508 Rnf-Nqr subunit, membrane protein CDIF29688_RS06290 PF02508 Rnf-Nqr subunit, membrane protein CDIF29688_RS06295 PF04060 Putative Fe-S cluster CDIF29688_RS06295 PF13187 4Fe-4S dicluster domain CDIF29688_RS06295 PF00037 4Fe-4S binding domain CDIF29688_RS06300 PF02545 Maf-like protein CDIF29688_RS06305 PF04002 RadC-like JAB domain CDIF29688_RS06325 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS06330 PF03775 Septum formation inhibitor MinC, C-terminal domain CDIF29688_RS06335 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29688_RS06340 PF03776 Septum formation topological specificity factor MinE CDIF29688_RS06345 PF01098 Cell cycle protein CDIF29688_RS06350 PF02142 MGS-like domain CDIF29688_RS06355 PF03551 Transcriptional regulator PadR-like family CDIF29688_RS06370 PF00258 Flavodoxin CDIF29688_RS06370 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS06385 PF00575 S1 RNA binding domain CDIF29688_RS06385 PF10150 Ribonuclease E/G family CDIF29688_RS06390 PF00829 Ribosomal prokaryotic L21 protein CDIF29688_RS06400 PF01016 Ribosomal L27 protein CDIF29688_RS06405 PF09269 Domain of unknown function (DUF1967) CDIF29688_RS06405 PF01018 GTP1/OBG CDIF29688_RS06405 PF01926 50S ribosome-binding GTPase CDIF29688_RS06415 PF00742 Homoserine dehydrogenase CDIF29688_RS06415 PF01842 ACT domain CDIF29688_RS06415 PF03447 Homoserine dehydrogenase, NAD binding domain CDIF29688_RS06425 PF07670 Nucleoside recognition CDIF29688_RS06430 PF07729 FCD domain CDIF29688_RS06430 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS06435 PF09861 Lactate racemase N-terminal domain CDIF29688_RS06440 PF01012 Electron transfer flavoprotein domain CDIF29688_RS06445 PF01012 Electron transfer flavoprotein domain CDIF29688_RS06445 PF00766 Electron transfer flavoprotein FAD-binding domain CDIF29688_RS06450 PF01565 FAD binding domain CDIF29688_RS06450 PF02913 FAD linked oxidases, C-terminal domain CDIF29688_RS06455 PF05636 HIGH Nucleotidyl Transferase CDIF29688_RS06460 PF00871 Acetokinase family CDIF29688_RS06470 PF01783 Ribosomal L32p protein family CDIF29688_RS06480 PF02504 Fatty acid synthesis protein CDIF29688_RS06485 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CDIF29688_RS06485 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDIF29688_RS06490 PF03060 Nitronate monooxygenase CDIF29688_RS06495 PF00698 Acyl transferase domain CDIF29688_RS06505 PF00550 Phosphopantetheine attachment site CDIF29688_RS06510 PF02801 Beta-ketoacyl synthase, C-terminal domain CDIF29688_RS06510 PF00109 Beta-ketoacyl synthase, N-terminal domain CDIF29688_RS06515 PF07694 5TMR of 5TMR-LYT CDIF29688_RS06515 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS06520 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS06520 PF00158 Sigma-54 interaction domain CDIF29688_RS06520 PF13426 PAS domain CDIF29688_RS06530 PF07722 Peptidase C26 CDIF29688_RS06535 PF13520 Amino acid permease CDIF29688_RS06545 PF06874 Firmicute fructose-1,6-bisphosphatase CDIF29688_RS06585 PF12685 SpoIIIAH-like protein CDIF29688_RS06590 PF03780 Asp23 family, cell envelope-related function CDIF29688_RS06595 PF01029 NusB family CDIF29688_RS06600 PF00814 Glycoprotease family CDIF29688_RS06605 PF13742 OB-fold nucleic acid binding domain CDIF29688_RS06605 PF02601 Exonuclease VII, large subunit CDIF29688_RS06615 PF00348 Polyprenyl synthetase CDIF29688_RS06620 PF02681 Divergent PAP2 family CDIF29688_RS06625 PF02779 Transketolase, pyrimidine binding domain CDIF29688_RS06625 PF02780 Transketolase, C-terminal domain CDIF29688_RS06625 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CDIF29688_RS06630 PF01728 FtsJ-like methyltransferase CDIF29688_RS06630 PF01479 S4 domain CDIF29688_RS06635 PF02463 RecF/RecN/SMC N terminal domain CDIF29688_RS06645 PF00583 Acetyltransferase (GNAT) family CDIF29688_RS06650 PF00583 Acetyltransferase (GNAT) family CDIF29688_RS06655 PF17820 PDZ domain CDIF29688_RS06655 PF05580 SpoIVB peptidase S55 CDIF29688_RS06660 PF00072 Response regulator receiver domain CDIF29688_RS06660 PF08769 Sporulation initiation factor Spo0A C terminal CDIF29688_RS06675 PF00535 Glycosyl transferase family 2 CDIF29688_RS06690 PF00293 NUDIX domain CDIF29688_RS06700 PF00589 Phage integrase family CDIF29688_RS06700 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29688_RS06705 PF01676 Metalloenzyme superfamily CDIF29688_RS06710 PF01048 Phosphorylase superfamily CDIF29688_RS06715 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CDIF29688_RS06715 PF02885 Glycosyl transferase family, helical bundle domain CDIF29688_RS06715 PF00591 Glycosyl transferase family, a/b domain CDIF29688_RS06720 PF02618 YceG-like family CDIF29688_RS06725 PF01596 O-methyltransferase CDIF29688_RS06730 PF16325 Peptidase family U32 C-terminal domain CDIF29688_RS06730 PF01136 Peptidase family U32 CDIF29688_RS06735 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS06735 PF03717 Penicillin-binding Protein dimerisation domain CDIF29688_RS06735 PF03793 PASTA domain CDIF29688_RS06830 PF04892 VanZ like family CDIF29688_RS06840 PF04545 Sigma-70, region 4 CDIF29688_RS06840 PF04542 Sigma-70 region 2 CDIF29688_RS06870 PF01132 Elongation factor P (EF-P) OB domain CDIF29688_RS06870 PF09285 Elongation factor P, C-terminal CDIF29688_RS06870 PF08207 Elongation factor P (EF-P) KOW-like domain CDIF29688_RS06880 PF00035 Double-stranded RNA binding motif CDIF29688_RS06880 PF14622 Ribonuclease-III-like CDIF29688_RS06890 PF06470 SMC proteins Flexible Hinge Domain CDIF29688_RS06890 PF02463 RecF/RecN/SMC N terminal domain CDIF29688_RS06895 PF02881 SRP54-type protein, helical bundle domain CDIF29688_RS06895 PF00448 SRP54-type protein, GTPase domain CDIF29688_RS06900 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CDIF29688_RS06905 PF00448 SRP54-type protein, GTPase domain CDIF29688_RS06905 PF02978 Signal peptide binding domain CDIF29688_RS06905 PF02881 SRP54-type protein, helical bundle domain CDIF29688_RS06910 PF00886 Ribosomal protein S16 CDIF29688_RS06920 PF01782 RimM N-terminal domain CDIF29688_RS06920 PF05239 PRC-barrel domain CDIF29688_RS06925 PF01746 tRNA (Guanine-1)-methyltransferase CDIF29688_RS06930 PF01245 Ribosomal protein L19 CDIF29688_RS06935 PF01926 50S ribosome-binding GTPase CDIF29688_RS06940 PF05525 Branched-chain amino acid transport protein CDIF29688_RS06945 PF05525 Branched-chain amino acid transport protein CDIF29688_RS06950 PF02867 Ribonucleotide reductase, barrel domain CDIF29688_RS06950 PF03477 ATP cone domain CDIF29688_RS06950 PF00317 Ribonucleotide reductase, all-alpha domain CDIF29688_RS06955 PF01351 Ribonuclease HII CDIF29688_RS06960 PF01070 FMN-dependent dehydrogenase CDIF29688_RS06985 PF00005 ABC transporter CDIF29688_RS06990 PF00072 Response regulator receiver domain CDIF29688_RS06990 PF00196 Bacterial regulatory proteins, luxR family CDIF29688_RS06995 PF07730 Histidine kinase CDIF29688_RS07000 PF02021 Uncharacterised protein family UPF0102 CDIF29688_RS07005 PF01078 Magnesium chelatase, subunit ChlI CDIF29688_RS07005 PF13335 Magnesium chelatase, subunit ChlI C-terminal CDIF29688_RS07010 PF02481 DNA recombination-mediator protein A CDIF29688_RS07010 PF17782 DprA winged helix domain CDIF29688_RS07015 PF01396 Topoisomerase DNA binding C4 zinc finger CDIF29688_RS07015 PF01751 Toprim domain CDIF29688_RS07015 PF01131 DNA topoisomerase CDIF29688_RS07020 PF08222 CodY helix-turn-helix domain CDIF29688_RS07020 PF06018 CodY GAF-like domain CDIF29688_RS07025 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDIF29688_RS07025 PF12002 MgsA AAA+ ATPase C terminal CDIF29688_RS07025 PF16193 AAA C-terminal domain CDIF29688_RS07035 PF02082 Transcriptional regulator CDIF29688_RS07040 PF00266 Aminotransferase class-V CDIF29688_RS07045 PF01592 NifU-like N terminal domain CDIF29688_RS07055 PF02272 DHHA1 domain CDIF29688_RS07055 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29688_RS07055 PF01411 tRNA synthetases class II (A) CDIF29688_RS07060 PF06135 IreB regulatory phosphoprotein CDIF29688_RS07070 PF03652 Holliday junction resolvase CDIF29688_RS07075 PF06949 Protein of unknown function (DUF1292) CDIF29688_RS07080 PF01475 Ferric uptake regulator family CDIF29688_RS07090 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS07090 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CDIF29688_RS07090 PF17770 Ribonuclease J C-terminal domain CDIF29688_RS07100 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29688_RS07100 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS07110 PF12833 Helix-turn-helix domain CDIF29688_RS07110 PF02311 AraC-like ligand binding domain CDIF29688_RS07115 PF02163 Peptidase family M50 CDIF29688_RS07120 PF02616 Segregation and condensation protein ScpA CDIF29688_RS07125 PF04079 Segregation and condensation complex subunit ScpB CDIF29688_RS07145 PF02789 Cytosol aminopeptidase family, N-terminal domain CDIF29688_RS07145 PF00883 Cytosol aminopeptidase family, catalytic domain CDIF29688_RS07165 PF02146 Sir2 family CDIF29688_RS07170 PF13457 GW (Gly-Tryp) dipeptide domain CDIF29688_RS07170 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29688_RS07175 PF02811 PHP domain CDIF29688_RS07175 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29688_RS07175 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29688_RS07175 PF14579 Helix-hairpin-helix motif CDIF29688_RS07175 PF11490 DNA polymerase III polC-type N-terminus II CDIF29688_RS07175 PF00929 Exonuclease CDIF29688_RS07175 PF01336 OB-fold nucleic acid binding domain CDIF29688_RS07180 PF02576 RimP N-terminal domain CDIF29688_RS07180 PF17384 RimP C-terminal SH3 domain CDIF29688_RS07185 PF00575 S1 RNA binding domain CDIF29688_RS07185 PF13184 NusA-like KH domain CDIF29688_RS07185 PF08529 NusA N-terminal domain CDIF29688_RS07190 PF04296 Protein of unknown function (DUF448) CDIF29688_RS07195 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CDIF29688_RS07200 PF04760 Translation initiation factor IF-2, N-terminal region CDIF29688_RS07200 PF11987 Translation-initiation factor 2 CDIF29688_RS07200 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS07205 PF02033 Ribosome-binding factor A CDIF29688_RS07210 PF01368 DHH family CDIF29688_RS07210 PF02272 DHHA1 domain CDIF29688_RS07215 PF16198 tRNA pseudouridylate synthase B C-terminal domain CDIF29688_RS07215 PF01509 TruB family pseudouridylate synthase (N terminal domain) CDIF29688_RS07220 PF01687 Riboflavin kinase CDIF29688_RS07220 PF06574 FAD synthetase CDIF29688_RS07230 PF00312 Ribosomal protein S15 CDIF29688_RS07235 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29688_RS07240 PF01138 3' exoribonuclease family, domain 1 CDIF29688_RS07240 PF00013 KH domain CDIF29688_RS07240 PF00575 S1 RNA binding domain CDIF29688_RS07240 PF03725 3' exoribonuclease family, domain 2 CDIF29688_RS07240 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CDIF29688_RS07245 PF13739 Deacetylase PdaC CDIF29688_RS07245 PF11738 Protein of unknown function (DUF3298) CDIF29688_RS07245 PF01522 Polysaccharide deacetylase CDIF29688_RS07250 PF00675 Insulinase (Peptidase family M16) CDIF29688_RS07250 PF05193 Peptidase M16 inactive domain CDIF29688_RS07255 PF05239 PRC-barrel domain CDIF29688_RS07260 PF00696 Amino acid kinase family CDIF29688_RS07260 PF13840 ACT domain CDIF29688_RS07265 PF00574 Clp protease CDIF29688_RS07270 PF01580 FtsK/SpoIIIE family CDIF29688_RS07270 PF17854 FtsK alpha domain CDIF29688_RS07270 PF09397 Ftsk gamma domain CDIF29688_RS07280 PF04055 Radical SAM superfamily CDIF29688_RS07280 PF18693 TRAM domain CDIF29688_RS07280 PF00919 Uncharacterized protein family UPF0004 CDIF29688_RS07285 PF01066 CDP-alcohol phosphatidyltransferase CDIF29688_RS07290 PF00154 recA bacterial DNA recombination protein CDIF29688_RS07295 PF01966 HD domain CDIF29688_RS07295 PF12072 Domain of unknown function (DUF3552) CDIF29688_RS07295 PF00013 KH domain CDIF29688_RS07305 PF10502 Signal peptidase, peptidase S26 CDIF29688_RS07310 PF02673 Bacitracin resistance protein BacA CDIF29688_RS07320 PF00206 Lyase CDIF29688_RS07320 PF10415 Fumarase C C-terminus CDIF29688_RS07330 PF00155 Aminotransferase class I and II CDIF29688_RS07340 PF03372 Endonuclease/Exonuclease/phosphatase family CDIF29688_RS07355 PF00534 Glycosyl transferases group 1 CDIF29688_RS07355 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29688_RS07360 PF03551 Transcriptional regulator PadR-like family CDIF29688_RS07380 PF00005 ABC transporter CDIF29688_RS07395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS07395 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS07410 PF00313 'Cold-shock' DNA-binding domain CDIF29688_RS07440 PF01381 Helix-turn-helix CDIF29688_RS07485 PF01476 LysM domain CDIF29688_RS07485 PF00877 NlpC/P60 family CDIF29688_RS07485 PF08239 Bacterial SH3 domain CDIF29688_RS07500 PF04865 Baseplate J-like protein CDIF29688_RS07505 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) CDIF29688_RS07550 PF01381 Helix-turn-helix CDIF29688_RS07555 PF07690 Major Facilitator Superfamily CDIF29688_RS07565 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29688_RS07565 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29688_RS07570 PF02080 TrkA-C domain CDIF29688_RS07570 PF03600 Citrate transporter CDIF29688_RS07575 PF03746 LamB/YcsF family CDIF29688_RS07580 PF01566 Natural resistance-associated macrophage protein CDIF29688_RS07585 PF02682 Carboxyltransferase domain, subdomain C and D CDIF29688_RS07590 PF02626 Carboxyltransferase domain, subdomain A and B CDIF29688_RS07595 PF01381 Helix-turn-helix CDIF29688_RS07595 PF08671 Anti-repressor SinI CDIF29688_RS07600 PF13378 Enolase C-terminal domain-like CDIF29688_RS07600 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CDIF29688_RS07610 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CDIF29688_RS07610 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CDIF29688_RS07640 PF01980 tRNA-methyltransferase O CDIF29688_RS07640 PF18389 TrmO C-terminal domain CDIF29688_RS07645 PF07687 Peptidase dimerisation domain CDIF29688_RS07645 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS07650 PF02016 LD-carboxypeptidase N-terminal domain CDIF29688_RS07650 PF17676 LD-carboxypeptidase C-terminal domain CDIF29688_RS07665 PF03009 Glycerophosphoryl diester phosphodiesterase family CDIF29688_RS07670 PF00668 Condensation domain CDIF29688_RS07670 PF00550 Phosphopantetheine attachment site CDIF29688_RS07670 PF00501 AMP-binding enzyme CDIF29688_RS07670 PF13193 AMP-binding enzyme C-terminal domain CDIF29688_RS07685 PF12848 ABC transporter CDIF29688_RS07685 PF16326 ABC transporter C-terminal domain CDIF29688_RS07685 PF00005 ABC transporter CDIF29688_RS07695 PF00155 Aminotransferase class I and II CDIF29688_RS07695 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS07700 PF07478 D-ala D-ala ligase C-terminus CDIF29688_RS07700 PF01820 D-ala D-ala ligase N-terminus CDIF29688_RS07705 PF18146 Damage-inducible protein CinA KH domain CDIF29688_RS07705 PF02464 Competence-damaged protein CDIF29688_RS07705 PF00994 Probable molybdopterin binding domain CDIF29688_RS07720 PF13188 PAS domain CDIF29688_RS07720 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS07720 PF00158 Sigma-54 interaction domain CDIF29688_RS07730 PF04055 Radical SAM superfamily CDIF29688_RS07730 PF16199 Radical_SAM C-terminal domain CDIF29688_RS07770 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS07770 PF08448 PAS fold CDIF29688_RS07770 PF05231 MASE1 CDIF29688_RS07770 PF13426 PAS domain CDIF29688_RS07770 PF08447 PAS fold CDIF29688_RS07770 PF00563 EAL domain CDIF29688_RS07775 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS07780 PF00563 EAL domain CDIF29688_RS07780 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS07780 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS07785 PF13411 MerR HTH family regulatory protein CDIF29688_RS07785 PF06445 GyrI-like small molecule binding domain CDIF29688_RS07800 PF02308 MgtC family CDIF29688_RS07815 PF00589 Phage integrase family CDIF29688_RS07815 PF02920 DNA binding domain of tn916 integrase CDIF29688_RS07820 PF09035 Excisionase from transposon Tn916 CDIF29688_RS07835 PF01209 ubiE/COQ5 methyltransferase family CDIF29688_RS07845 PF01554 MatE CDIF29688_RS07860 PF00857 Isochorismatase family CDIF29688_RS07880 PF01522 Polysaccharide deacetylase CDIF29688_RS07885 PF00929 Exonuclease CDIF29688_RS07885 PF13307 Helicase C-terminal domain CDIF29688_RS07890 PF00075 RNase H CDIF29688_RS07895 PF00578 AhpC/TSA family CDIF29688_RS07895 PF10417 C-terminal domain of 1-Cys peroxiredoxin CDIF29688_RS07910 PF04294 VanW like protein CDIF29688_RS07915 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS07915 PF13188 PAS domain CDIF29688_RS07915 PF00158 Sigma-54 interaction domain CDIF29688_RS07925 PF03788 LrgA family CDIF29688_RS07930 PF04172 LrgB-like family CDIF29688_RS07935 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29688_RS07935 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29688_RS07945 PF00188 Cysteine-rich secretory protein family CDIF29688_RS07950 PF11738 Protein of unknown function (DUF3298) CDIF29688_RS07950 PF13739 Deacetylase PdaC CDIF29688_RS07950 PF01522 Polysaccharide deacetylase CDIF29688_RS07955 PF00117 Glutamine amidotransferase class-I CDIF29688_RS07960 PF04715 Anthranilate synthase component I, N terminal region CDIF29688_RS07960 PF00425 chorismate binding enzyme CDIF29688_RS07965 PF01063 Amino-transferase class IV CDIF29688_RS07975 PF01227 GTP cyclohydrolase I CDIF29688_RS07980 PF00809 Pterin binding enzyme CDIF29688_RS07985 PF02152 Dihydroneopterin aldolase CDIF29688_RS07990 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CDIF29688_RS07995 PF18152 DAHP synthase ferredoxin-like domain CDIF29688_RS07995 PF00793 DAHP synthetase I family CDIF29688_RS08000 PF08275 DNA primase catalytic core, N-terminal domain CDIF29688_RS08000 PF10410 DnaB-helicase binding domain of primase CDIF29688_RS08000 PF01807 CHC2 zinc finger CDIF29688_RS08005 PF03979 Sigma-70 factor, region 1.1 CDIF29688_RS08005 PF04545 Sigma-70, region 4 CDIF29688_RS08005 PF04539 Sigma-70 region 3 CDIF29688_RS08005 PF00140 Sigma-70 factor, region 1.2 CDIF29688_RS08005 PF04542 Sigma-70 region 2 CDIF29688_RS08010 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CDIF29688_RS08015 PF01784 NIF3 (NGG1p interacting factor 3) CDIF29688_RS08020 PF03358 NADPH-dependent FMN reductase CDIF29688_RS08040 PF00155 Aminotransferase class I and II CDIF29688_RS08040 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS08050 PF00072 Response regulator receiver domain CDIF29688_RS08050 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS08055 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS08055 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS08055 PF00672 HAMP domain CDIF29688_RS08060 PF00005 ABC transporter CDIF29688_RS08060 PF12704 MacB-like periplasmic core domain CDIF29688_RS08060 PF02687 FtsX-like permease family CDIF29688_RS08075 PF00144 Beta-lactamase CDIF29688_RS08080 PF00581 Rhodanese-like domain CDIF29688_RS08080 PF17773 UPF0176 acylphosphatase like domain CDIF29688_RS08085 PF01061 ABC-2 type transporter CDIF29688_RS08090 PF00005 ABC transporter CDIF29688_RS08090 PF00664 ABC transporter transmembrane region CDIF29688_RS08095 PF00664 ABC transporter transmembrane region CDIF29688_RS08095 PF00005 ABC transporter CDIF29688_RS08100 PF02915 Rubrerythrin CDIF29688_RS08105 PF01738 Dienelactone hydrolase family CDIF29688_RS08110 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS08110 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS08110 PF00563 EAL domain CDIF29688_RS08125 PF07670 Nucleoside recognition CDIF29688_RS08125 PF02421 Ferrous iron transport protein B CDIF29688_RS08125 PF17910 FeoB cytosolic helical domain CDIF29688_RS08125 PF07664 Ferrous iron transport protein B C terminus CDIF29688_RS08140 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS08145 PF00005 ABC transporter CDIF29688_RS08175 PF00005 ABC transporter CDIF29688_RS08175 PF09383 NIL domain CDIF29688_RS08180 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS08185 PF03180 NLPA lipoprotein CDIF29688_RS08190 PF00989 PAS fold CDIF29688_RS08190 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS08190 PF16736 Single Cache-like CDIF29688_RS08190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS08195 PF02245 Methylpurine-DNA glycosylase (MPG) CDIF29688_RS08205 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDIF29688_RS08205 PF03807 NADP oxidoreductase coenzyme F420-dependent CDIF29688_RS08210 PF06207 Protein of unknown function (DUF1002) CDIF29688_RS08220 PF04545 Sigma-70, region 4 CDIF29688_RS08220 PF00140 Sigma-70 factor, region 1.2 CDIF29688_RS08220 PF04539 Sigma-70 region 3 CDIF29688_RS08220 PF04542 Sigma-70 region 2 CDIF29688_RS08220 PF03979 Sigma-70 factor, region 1.1 CDIF29688_RS08225 PF03023 Lipid II flippase MurJ CDIF29688_RS08230 PF01791 DeoC/LacD family aldolase CDIF29688_RS08240 PF00005 ABC transporter CDIF29688_RS08250 PF01554 MatE CDIF29688_RS08265 PF04205 FMN-binding domain CDIF29688_RS08265 PF12801 4Fe-4S binding domain CDIF29688_RS08295 PF02569 Pantoate-beta-alanine ligase CDIF29688_RS08300 PF02548 Ketopantoate hydroxymethyltransferase CDIF29688_RS08310 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS08310 PF13426 PAS domain CDIF29688_RS08310 PF00563 EAL domain CDIF29688_RS08320 PF13411 MerR HTH family regulatory protein CDIF29688_RS08320 PF06445 GyrI-like small molecule binding domain CDIF29688_RS08325 PF07670 Nucleoside recognition CDIF29688_RS08325 PF07664 Ferrous iron transport protein B C terminus CDIF29688_RS08325 PF02421 Ferrous iron transport protein B CDIF29688_RS08325 PF17910 FeoB cytosolic helical domain CDIF29688_RS08345 PF01479 S4 domain CDIF29688_RS08345 PF00579 tRNA synthetases class I (W and Y) CDIF29688_RS08350 PF01522 Polysaccharide deacetylase CDIF29688_RS08350 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CDIF29688_RS08360 PF02915 Rubrerythrin CDIF29688_RS08365 PF04015 Domain of unknown function (DUF362) CDIF29688_RS08370 PF01979 Amidohydrolase family CDIF29688_RS08375 PF02687 FtsX-like permease family CDIF29688_RS08375 PF12704 MacB-like periplasmic core domain CDIF29688_RS08380 PF00005 ABC transporter CDIF29688_RS08380 PF02687 FtsX-like permease family CDIF29688_RS08380 PF12704 MacB-like periplasmic core domain CDIF29688_RS08390 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS08395 PF00072 Response regulator receiver domain CDIF29688_RS08395 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS08400 PF00005 ABC transporter CDIF29688_RS08405 PF02687 FtsX-like permease family CDIF29688_RS08420 PF00175 Oxidoreductase NAD-binding domain CDIF29688_RS08420 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29688_RS08425 PF13247 4Fe-4S dicluster domain CDIF29688_RS08425 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDIF29688_RS08425 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS08430 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS08430 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS08430 PF00563 EAL domain CDIF29688_RS08435 PF00005 ABC transporter CDIF29688_RS08440 PF02687 FtsX-like permease family CDIF29688_RS08445 PF01554 MatE CDIF29688_RS08455 PF02525 Flavodoxin-like fold CDIF29688_RS08470 PF03006 Haemolysin-III related CDIF29688_RS08480 PF13393 Histidyl-tRNA synthetase CDIF29688_RS08485 PF01634 ATP phosphoribosyltransferase CDIF29688_RS08490 PF00155 Aminotransferase class I and II CDIF29688_RS08495 PF00475 Imidazoleglycerol-phosphate dehydratase CDIF29688_RS08500 PF00117 Glutamine amidotransferase class-I CDIF29688_RS08505 PF00977 Histidine biosynthesis protein CDIF29688_RS08510 PF00977 Histidine biosynthesis protein CDIF29688_RS08515 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CDIF29688_RS08515 PF01502 Phosphoribosyl-AMP cyclohydrolase CDIF29688_RS08520 PF13520 Amino acid permease CDIF29688_RS08525 PF01522 Polysaccharide deacetylase CDIF29688_RS08535 PF04542 Sigma-70 region 2 CDIF29688_RS08535 PF08281 Sigma-70, region 4 CDIF29688_RS08540 PF11738 Protein of unknown function (DUF3298) CDIF29688_RS08540 PF13739 Deacetylase PdaC CDIF29688_RS08545 PF11738 Protein of unknown function (DUF3298) CDIF29688_RS08545 PF13739 Deacetylase PdaC CDIF29688_RS08550 PF13478 XdhC Rossmann domain CDIF29688_RS08550 PF02625 XdhC and CoxI family CDIF29688_RS08565 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CDIF29688_RS08565 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CDIF29688_RS08570 PF00205 Thiamine pyrophosphate enzyme, central domain CDIF29688_RS08570 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CDIF29688_RS08570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDIF29688_RS08575 PF00589 Phage integrase family CDIF29688_RS08575 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29688_RS08590 PF01381 Helix-turn-helix CDIF29688_RS08595 PF01381 Helix-turn-helix CDIF29688_RS08625 PF01381 Helix-turn-helix CDIF29688_RS08635 PF03374 Phage antirepressor protein KilAC domain CDIF29688_RS08635 PF09669 Phage regulatory protein Rha (Phage_pRha) CDIF29688_RS08650 PF01381 Helix-turn-helix CDIF29688_RS08680 PF00436 Single-strand binding protein family CDIF29688_RS08695 PF00145 C-5 cytosine-specific DNA methylase CDIF29688_RS08740 PF10668 Phage terminase small subunit CDIF29688_RS08815 PF09393 Phage tail tube protein CDIF29688_RS08870 PF10934 Protein of unknown function (DUF2634) CDIF29688_RS08875 PF04865 Baseplate J-like protein CDIF29688_RS08945 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS08945 PF05257 CHAP domain CDIF29688_RS08945 PF08460 Bacterial SH3 domain CDIF29688_RS08960 PF05067 Manganese containing catalase CDIF29688_RS08965 PF03190 Protein of unknown function, DUF255 CDIF29688_RS08975 PF12146 Serine aminopeptidase, S33 CDIF29688_RS09000 PF06414 Zeta toxin CDIF29688_RS09005 PF08998 Bacterial epsilon antitoxin CDIF29688_RS09015 PF13614 AAA domain CDIF29688_RS09030 PF00398 Ribosomal RNA adenine dimethylase CDIF29688_RS09040 PF01751 Toprim domain CDIF29688_RS09040 PF01131 DNA topoisomerase CDIF29688_RS09080 PF01076 Plasmid recombination enzyme CDIF29688_RS09105 PF06725 3D domain CDIF29688_RS09105 PF01476 LysM domain CDIF29688_RS09115 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29688_RS09115 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29688_RS09115 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29688_RS09115 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29688_RS09120 PF03631 Virulence factor BrkB CDIF29688_RS09125 PF00672 HAMP domain CDIF29688_RS09125 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS09125 PF00989 PAS fold CDIF29688_RS09125 PF18698 Histidine kinase sensor domain CDIF29688_RS09125 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS09130 PF03447 Homoserine dehydrogenase, NAD binding domain CDIF29688_RS09130 PF00742 Homoserine dehydrogenase CDIF29688_RS09130 PF01842 ACT domain CDIF29688_RS09140 PF00815 Histidinol dehydrogenase CDIF29688_RS09145 PF00561 alpha/beta hydrolase fold CDIF29688_RS09160 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29688_RS09170 PF00005 ABC transporter CDIF29688_RS09175 PF02653 Branched-chain amino acid transport system / permease component CDIF29688_RS09180 PF13407 Periplasmic binding protein domain CDIF29688_RS09185 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29688_RS09185 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29688_RS09195 PF03814 Potassium-transporting ATPase A subunit CDIF29688_RS09205 PF02669 K+-transporting ATPase, c chain CDIF29688_RS09210 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS09215 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29688_RS09225 PF02810 SEC-C motif CDIF29688_RS09225 PF00557 Metallopeptidase family M24 CDIF29688_RS09230 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CDIF29688_RS09235 PF01541 GIY-YIG catalytic domain CDIF29688_RS09240 PF08543 Phosphomethylpyrimidine kinase CDIF29688_RS09245 PF02110 Hydroxyethylthiazole kinase family CDIF29688_RS09250 PF02581 Thiamine monophosphate synthase CDIF29688_RS09255 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS09265 PF13732 Domain of unknown function (DUF4162) CDIF29688_RS09265 PF00005 ABC transporter CDIF29688_RS09275 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS09280 PF00005 ABC transporter CDIF29688_RS09280 PF08402 TOBE domain CDIF29688_RS09305 PF01979 Amidohydrolase family CDIF29688_RS09315 PF00005 ABC transporter CDIF29688_RS09320 PF12679 ABC-2 family transporter protein CDIF29688_RS09325 PF00563 EAL domain CDIF29688_RS09325 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS09325 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS09330 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS09335 PF00005 ABC transporter CDIF29688_RS09350 PF00924 Mechanosensitive ion channel CDIF29688_RS09350 PF05552 Conserved TM helix CDIF29688_RS09360 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS09360 PF00258 Flavodoxin CDIF29688_RS09365 PF00072 Response regulator receiver domain CDIF29688_RS09365 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS09370 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS09370 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS09375 PF01820 D-ala D-ala ligase N-terminus CDIF29688_RS09375 PF07478 D-ala D-ala ligase C-terminus CDIF29688_RS09380 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS09385 PF01168 Alanine racemase, N-terminal domain CDIF29688_RS09385 PF00842 Alanine racemase, C-terminal domain CDIF29688_RS09385 PF01757 Acyltransferase family CDIF29688_RS09400 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CDIF29688_RS09400 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CDIF29688_RS09405 PF13537 Glutamine amidotransferase domain CDIF29688_RS09405 PF00733 Asparagine synthase CDIF29688_RS09410 PF13180 PDZ domain CDIF29688_RS09415 PF02342 TerD domain CDIF29688_RS09420 PF02342 TerD domain CDIF29688_RS09425 PF02342 TerD domain CDIF29688_RS09430 PF00690 Cation transporter/ATPase, N-terminus CDIF29688_RS09430 PF00689 Cation transporting ATPase, C-terminus CDIF29688_RS09435 PF14266 Putative component of 'biosynthetic module' CDIF29688_RS09440 PF05816 Toxic anion resistance protein (TelA) CDIF29688_RS09470 PF05684 Protein of unknown function (DUF819) CDIF29688_RS09475 PF01244 Membrane dipeptidase (Peptidase family M19) CDIF29688_RS09480 PF01032 FecCD transport family CDIF29688_RS09485 PF01032 FecCD transport family CDIF29688_RS09490 PF00005 ABC transporter CDIF29688_RS09495 PF01497 Periplasmic binding protein CDIF29688_RS09500 PF01590 GAF domain CDIF29688_RS09500 PF00563 EAL domain CDIF29688_RS09500 PF00360 Phytochrome region CDIF29688_RS09500 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS09505 PF02342 TerD domain CDIF29688_RS09510 PF03180 NLPA lipoprotein CDIF29688_RS09515 PF10437 Bacterial lipoate protein ligase C-terminus CDIF29688_RS09515 PF03099 Biotin/lipoate A/B protein ligase family CDIF29688_RS09520 PF03553 Na+/H+ antiporter family CDIF29688_RS09535 PF02347 Glycine cleavage system P-protein CDIF29688_RS09540 PF02347 Glycine cleavage system P-protein CDIF29688_RS09550 PF06865 Pyrimidine/purine nucleoside phosphorylase CDIF29688_RS09555 PF01979 Amidohydrolase family CDIF29688_RS09570 PF07883 Cupin domain CDIF29688_RS09570 PF01381 Helix-turn-helix CDIF29688_RS09575 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS09580 PF03009 Glycerophosphoryl diester phosphodiesterase family CDIF29688_RS09585 PF12464 Maltose acetyltransferase CDIF29688_RS09585 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29688_RS09600 PF00005 ABC transporter CDIF29688_RS09615 PF00239 Resolvase, N terminal domain CDIF29688_RS09615 PF13408 Recombinase zinc beta ribbon domain CDIF29688_RS09615 PF07508 Recombinase CDIF29688_RS09695 PF13614 AAA domain CDIF29688_RS09745 PF00574 Clp protease CDIF29688_RS09835 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS09840 PF01555 DNA methylase CDIF29688_RS09840 PF18755 Restriction Enzyme Adenine Methylase Associated CDIF29688_RS09850 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS09850 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS09870 PF01638 HxlR-like helix-turn-helix CDIF29688_RS09875 PF01470 Pyroglutamyl peptidase CDIF29688_RS09905 PF08359 YsiA-like protein, C-terminal region CDIF29688_RS09905 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS09910 PF01156 Inosine-uridine preferring nucleoside hydrolase CDIF29688_RS09940 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS09940 PF00072 Response regulator receiver domain CDIF29688_RS09945 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS09945 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS09950 PF00085 Thioredoxin CDIF29688_RS09955 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS09960 PF01022 Bacterial regulatory protein, arsR family CDIF29688_RS09975 PF03600 Citrate transporter CDIF29688_RS09980 PF01235 Sodium:alanine symporter family CDIF29688_RS09985 PF00885 6,7-dimethyl-8-ribityllumazine synthase CDIF29688_RS09990 PF00925 GTP cyclohydrolase II CDIF29688_RS09990 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CDIF29688_RS09995 PF00677 Lumazine binding domain CDIF29688_RS10000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29688_RS10000 PF01872 RibD C-terminal domain CDIF29688_RS10005 PF16124 RecQ zinc-binding CDIF29688_RS10005 PF00570 HRDC domain CDIF29688_RS10005 PF00271 Helicase conserved C-terminal domain CDIF29688_RS10005 PF00270 DEAD/DEAH box helicase CDIF29688_RS10005 PF09382 RQC domain CDIF29688_RS10010 PF01964 Radical SAM ThiC family CDIF29688_RS10020 PF00899 ThiF family CDIF29688_RS10020 PF00581 Rhodanese-like domain CDIF29688_RS10025 PF05690 Thiazole biosynthesis protein ThiG CDIF29688_RS10030 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29688_RS10030 PF04055 Radical SAM superfamily CDIF29688_RS10040 PF03606 C4-dicarboxylate anaerobic carrier CDIF29688_RS10050 PF12804 MobA-like NTP transferase domain CDIF29688_RS10060 PF01906 Putative heavy-metal-binding CDIF29688_RS10065 PF00994 Probable molybdopterin binding domain CDIF29688_RS10070 PF06463 Molybdenum Cofactor Synthesis C CDIF29688_RS10070 PF04055 Radical SAM superfamily CDIF29688_RS10075 PF01967 MoaC family CDIF29688_RS10115 PF01553 Acyltransferase CDIF29688_RS10150 PF02690 Na+/Pi-cotransporter CDIF29688_RS10165 PF10609 NUBPL iron-transfer P-loop NTPase CDIF29688_RS10175 PF02607 B12 binding domain CDIF29688_RS10175 PF02310 B12 binding domain CDIF29688_RS10180 PF01208 Uroporphyrinogen decarboxylase (URO-D) CDIF29688_RS10190 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS10195 PF07883 Cupin domain CDIF29688_RS10195 PF01381 Helix-turn-helix CDIF29688_RS10200 PF02447 GntP family permease CDIF29688_RS10205 PF08447 PAS fold CDIF29688_RS10205 PF00989 PAS fold CDIF29688_RS10205 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS10205 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS10210 PF00072 Response regulator receiver domain CDIF29688_RS10210 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS10210 PF00158 Sigma-54 interaction domain CDIF29688_RS10215 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29688_RS10225 PF00072 Response regulator receiver domain CDIF29688_RS10225 PF04397 LytTr DNA-binding domain CDIF29688_RS10250 PF03616 Sodium/glutamate symporter CDIF29688_RS10255 PF00962 Adenosine/AMP deaminase CDIF29688_RS10260 PF12787 EcsC protein family CDIF29688_RS10265 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CDIF29688_RS10270 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29688_RS10275 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS10275 PF08486 Stage II sporulation protein CDIF29688_RS10285 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS10290 PF00005 ABC transporter CDIF29688_RS10310 PF01327 Polypeptide deformylase CDIF29688_RS10335 PF02567 Phenazine biosynthesis-like protein CDIF29688_RS10340 PF11208 Protein of unknown function (DUF2992) CDIF29688_RS10345 PF06961 Protein of unknown function (DUF1294) CDIF29688_RS10360 PF00293 NUDIX domain CDIF29688_RS10370 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDIF29688_RS10370 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDIF29688_RS10385 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29688_RS10410 PF00497 Bacterial extracellular solute-binding proteins, family 3 CDIF29688_RS10415 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS10420 PF00005 ABC transporter CDIF29688_RS10425 PF03960 ArsC family CDIF29688_RS10435 PF02540 NAD synthase CDIF29688_RS10440 PF02926 THUMP domain CDIF29688_RS10440 PF01170 Putative RNA methylase family UPF0020 CDIF29688_RS10450 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS10450 PF00072 Response regulator receiver domain CDIF29688_RS10455 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS10455 PF00672 HAMP domain CDIF29688_RS10455 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS10460 PF01416 tRNA pseudouridine synthase CDIF29688_RS10465 PF00764 Arginosuccinate synthase CDIF29688_RS10475 PF13411 MerR HTH family regulatory protein CDIF29688_RS10475 PF07739 TipAS antibiotic-recognition domain CDIF29688_RS10485 PF04239 Protein of unknown function (DUF421) CDIF29688_RS10500 PF01370 NAD dependent epimerase/dehydratase family CDIF29688_RS10520 PF13187 4Fe-4S dicluster domain CDIF29688_RS10520 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDIF29688_RS10520 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDIF29688_RS10525 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29688_RS10525 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS10530 PF03466 LysR substrate binding domain CDIF29688_RS10530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS10535 PF02342 TerD domain CDIF29688_RS10540 PF02342 TerD domain CDIF29688_RS10545 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29688_RS10545 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29688_RS10560 PF00356 Bacterial regulatory proteins, lacI family CDIF29688_RS10560 PF13407 Periplasmic binding protein domain CDIF29688_RS10570 PF00251 Glycosyl hydrolases family 32 N-terminal domain CDIF29688_RS10570 PF08244 Glycosyl hydrolases family 32 C terminal CDIF29688_RS10575 PF00294 pfkB family carbohydrate kinase CDIF29688_RS10590 PF07690 Major Facilitator Superfamily CDIF29688_RS10595 PF07690 Major Facilitator Superfamily CDIF29688_RS10620 PF00300 Histidine phosphatase superfamily (branch 1) CDIF29688_RS10630 PF02224 Cytidylate kinase CDIF29688_RS10635 PF01553 Acyltransferase CDIF29688_RS10640 PF02401 LytB protein CDIF29688_RS10660 PF01385 Probable transposase CDIF29688_RS10660 PF12323 Helix-turn-helix domain CDIF29688_RS10660 PF07282 Putative transposase DNA-binding domain CDIF29688_RS10665 PF13382 Adenine deaminase C-terminal domain CDIF29688_RS10665 PF01979 Amidohydrolase family CDIF29688_RS10670 PF00578 AhpC/TSA family CDIF29688_RS10675 PF03883 Peroxide stress protein YaaA CDIF29688_RS10680 PF00690 Cation transporter/ATPase, N-terminus CDIF29688_RS10680 PF00689 Cation transporting ATPase, C-terminus CDIF29688_RS10685 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29688_RS10690 PF04204 Homoserine O-succinyltransferase CDIF29688_RS10695 PF01047 MarR family CDIF29688_RS10700 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS10700 PF17862 AAA+ lid domain CDIF29688_RS10700 PF01434 Peptidase family M41 CDIF29688_RS10700 PF06480 FtsH Extracellular CDIF29688_RS10705 PF13493 Domain of unknown function (DUF4118) CDIF29688_RS10705 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS10705 PF02702 Osmosensitive K+ channel His kinase sensor domain CDIF29688_RS10705 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS10710 PF00072 Response regulator receiver domain CDIF29688_RS10710 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS10715 PF01544 CorA-like Mg2+ transporter protein CDIF29688_RS10725 PF18152 DAHP synthase ferredoxin-like domain CDIF29688_RS10725 PF00793 DAHP synthetase I family CDIF29688_RS10730 PF01761 3-dehydroquinate synthase CDIF29688_RS10735 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CDIF29688_RS10740 PF01264 Chorismate synthase CDIF29688_RS10745 PF00800 Prephenate dehydratase CDIF29688_RS10745 PF01817 Chorismate mutase type II CDIF29688_RS10750 PF08501 Shikimate dehydrogenase substrate binding domain CDIF29688_RS10755 PF01202 Shikimate kinase CDIF29688_RS10760 PF02153 Prephenate dehydrogenase CDIF29688_RS10765 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS10765 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS10765 PF00563 EAL domain CDIF29688_RS10770 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS10770 PF17158 Membrane-associated sensor, integral membrane domain CDIF29688_RS10800 PF08241 Methyltransferase domain CDIF29688_RS10805 PF04073 Aminoacyl-tRNA editing domain CDIF29688_RS10830 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS10835 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29688_RS10865 PF13427 Domain of unknown function (DUF4111) CDIF29688_RS10865 PF18765 Polymerase beta, Nucleotidyltransferase CDIF29688_RS10870 PF01048 Phosphorylase superfamily CDIF29688_RS10900 PF01076 Plasmid recombination enzyme CDIF29688_RS10930 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS10940 PF00239 Resolvase, N terminal domain CDIF29688_RS10940 PF02796 Helix-turn-helix domain of resolvase CDIF29688_RS10950 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS10955 PF00936 BMC domain CDIF29688_RS10960 PF10662 Ethanolamine utilisation - propanediol utilisation CDIF29688_RS10965 PF00072 Response regulator receiver domain CDIF29688_RS10965 PF03861 ANTAR domain CDIF29688_RS10970 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS10970 PF12282 Signal transduction histidine kinase CDIF29688_RS10970 PF07568 Histidine kinase CDIF29688_RS10975 PF06277 Ethanolamine utilisation protein EutA CDIF29688_RS10980 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CDIF29688_RS10985 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CDIF29688_RS10990 PF00936 BMC domain CDIF29688_RS10995 PF00936 BMC domain CDIF29688_RS11000 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS11000 PF00171 Aldehyde dehydrogenase family CDIF29688_RS11005 PF00936 BMC domain CDIF29688_RS11015 PF06130 Phosphate propanoyltransferase CDIF29688_RS11025 PF03319 Ethanolamine utilisation protein EutN/carboxysome CDIF29688_RS11035 PF04346 Ethanolamine utilisation protein, EutH CDIF29688_RS11040 PF06249 Ethanolamine utilisation protein EutQ CDIF29688_RS11050 PF00005 ABC transporter CDIF29688_RS11070 PF01726 LexA DNA binding domain CDIF29688_RS11070 PF00717 Peptidase S24-like CDIF29688_RS11075 PF02899 Phage integrase, N-terminal SAM-like domain CDIF29688_RS11075 PF00589 Phage integrase family CDIF29688_RS11090 PF04232 Stage V sporulation protein S (SpoVS) CDIF29688_RS11095 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CDIF29688_RS11100 PF01039 Carboxyl transferase domain CDIF29688_RS11100 PF17848 Acetyl-coA carboxylase zinc finger domain CDIF29688_RS11105 PF02785 Biotin carboxylase C-terminal domain CDIF29688_RS11105 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29688_RS11105 PF00289 Biotin carboxylase, N-terminal domain CDIF29688_RS11110 PF00364 Biotin-requiring enzyme CDIF29688_RS11130 PF02390 Putative methyltransferase CDIF29688_RS11155 PF00005 ABC transporter CDIF29688_RS11165 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS11165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS11170 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29688_RS11170 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29688_RS11175 PF13302 Acetyltransferase (GNAT) domain CDIF29688_RS11180 PF03466 LysR substrate binding domain CDIF29688_RS11180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS11195 PF00005 ABC transporter CDIF29688_RS11200 PF07689 KaiB domain CDIF29688_RS11200 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS11200 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS11205 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS11205 PF00072 Response regulator receiver domain CDIF29688_RS11210 PF13486 Reductive dehalogenase subunit CDIF29688_RS11210 PF12838 4Fe-4S dicluster domain CDIF29688_RS11215 PF00072 Response regulator receiver domain CDIF29688_RS11215 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS11220 PF16736 Single Cache-like CDIF29688_RS11220 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS11220 PF00989 PAS fold CDIF29688_RS11220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS11225 PF02687 FtsX-like permease family CDIF29688_RS11225 PF00005 ABC transporter CDIF29688_RS11225 PF12704 MacB-like periplasmic core domain CDIF29688_RS11260 PF04474 Protein of unknown function (DUF554) CDIF29688_RS11265 PF04073 Aminoacyl-tRNA editing domain CDIF29688_RS11280 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS11285 PF06838 Methionine gamma-lyase CDIF29688_RS11290 PF17209 Hfq protein CDIF29688_RS11300 PF01119 DNA mismatch repair protein, C-terminal domain CDIF29688_RS11300 PF08676 MutL C terminal dimerisation domain CDIF29688_RS11305 PF01624 MutS domain I CDIF29688_RS11305 PF05192 MutS domain III CDIF29688_RS11305 PF05190 MutS family domain IV CDIF29688_RS11305 PF05188 MutS domain II CDIF29688_RS11305 PF00488 MutS domain V CDIF29688_RS11310 PF00005 ABC transporter CDIF29688_RS11315 PF09084 NMT1/THI5 like CDIF29688_RS11320 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS11335 PF01638 HxlR-like helix-turn-helix CDIF29688_RS11345 PF00293 NUDIX domain CDIF29688_RS11355 PF04055 Radical SAM superfamily CDIF29688_RS11355 PF01938 TRAM domain CDIF29688_RS11355 PF00919 Uncharacterized protein family UPF0004 CDIF29688_RS11360 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS11360 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS11370 PF17099 Tryptophan transporter TrpP CDIF29688_RS11395 PF00313 'Cold-shock' DNA-binding domain CDIF29688_RS11415 PF02627 Carboxymuconolactone decarboxylase family CDIF29688_RS11440 PF01925 Sulfite exporter TauE/SafE CDIF29688_RS11445 PF12833 Helix-turn-helix domain CDIF29688_RS11450 PF13411 MerR HTH family regulatory protein CDIF29688_RS11455 PF03328 HpcH/HpaI aldolase/citrate lyase family CDIF29688_RS11460 PF00258 Flavodoxin CDIF29688_RS11465 PF00082 Subtilase family CDIF29688_RS11470 PF00561 alpha/beta hydrolase fold CDIF29688_RS11475 PF18665 Tetracyclin repressor-like, C-terminal domain CDIF29688_RS11475 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS11485 PF00920 Dehydratase family CDIF29688_RS11495 PF04892 VanZ like family CDIF29688_RS11515 PF12833 Helix-turn-helix domain CDIF29688_RS11520 PF07690 Major Facilitator Superfamily CDIF29688_RS11525 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29688_RS11525 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29688_RS11525 PF07724 AAA domain (Cdc48 subfamily) CDIF29688_RS11525 PF17871 AAA lid domain CDIF29688_RS11525 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS11540 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS11545 PF00005 ABC transporter CDIF29688_RS11560 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS11560 PF07687 Peptidase dimerisation domain CDIF29688_RS11565 PF01177 Asp/Glu/Hydantoin racemase CDIF29688_RS11575 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CDIF29688_RS11575 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CDIF29688_RS11580 PF00202 Aminotransferase class-III CDIF29688_RS11585 PF00696 Amino acid kinase family CDIF29688_RS11590 PF01960 ArgJ family CDIF29688_RS11595 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDIF29688_RS11595 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDIF29688_RS11600 PF14268 YoaP-like CDIF29688_RS11600 PF00583 Acetyltransferase (GNAT) family CDIF29688_RS11610 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS11610 PF13305 Tetracyclin repressor-like, C-terminal domain CDIF29688_RS11635 PF13443 Cro/C1-type HTH DNA-binding domain CDIF29688_RS11650 PF00072 Response regulator receiver domain CDIF29688_RS11650 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS11655 PF01418 Helix-turn-helix domain, rpiR family CDIF29688_RS11655 PF01380 SIS domain CDIF29688_RS11660 PF06962 Putative rRNA methylase CDIF29688_RS11665 PF01479 S4 domain CDIF29688_RS11665 PF00849 RNA pseudouridylate synthase CDIF29688_RS11670 PF01594 AI-2E family transporter CDIF29688_RS11680 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CDIF29688_RS11680 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CDIF29688_RS11685 PF13840 ACT domain CDIF29688_RS11685 PF01842 ACT domain CDIF29688_RS11685 PF00696 Amino acid kinase family CDIF29688_RS11715 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CDIF29688_RS11715 PF00749 tRNA synthetases class I (E and Q), catalytic domain CDIF29688_RS11720 PF00781 Diacylglycerol kinase catalytic domain CDIF29688_RS11750 PF00589 Phage integrase family CDIF29688_RS11750 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29688_RS11760 PF12848 ABC transporter CDIF29688_RS11760 PF00005 ABC transporter CDIF29688_RS11785 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29688_RS11785 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29688_RS11785 PF01799 [2Fe-2S] binding domain CDIF29688_RS11795 PF00860 Permease family CDIF29688_RS11810 PF01180 Dihydroorotate dehydrogenase CDIF29688_RS11815 PF01979 Amidohydrolase family CDIF29688_RS11820 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29688_RS11820 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29688_RS11830 PF01799 [2Fe-2S] binding domain CDIF29688_RS11830 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29688_RS11835 PF01979 Amidohydrolase family CDIF29688_RS11840 PF01979 Amidohydrolase family CDIF29688_RS11845 PF07687 Peptidase dimerisation domain CDIF29688_RS11845 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS11850 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS11860 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29688_RS11860 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29688_RS11865 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29688_RS11865 PF01799 [2Fe-2S] binding domain CDIF29688_RS11870 PF01979 Amidohydrolase family CDIF29688_RS11875 PF00860 Permease family CDIF29688_RS11880 PF00860 Permease family CDIF29688_RS11885 PF00158 Sigma-54 interaction domain CDIF29688_RS11885 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS11885 PF13188 PAS domain CDIF29688_RS11895 PF12102 Domain of unknown function (DUF3578) CDIF29688_RS11895 PF07728 AAA domain (dynein-related subfamily) CDIF29688_RS11910 PF06177 QueT transporter CDIF29688_RS11920 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29688_RS11920 PF01799 [2Fe-2S] binding domain CDIF29688_RS11920 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29688_RS11925 PF01799 [2Fe-2S] binding domain CDIF29688_RS11925 PF00111 2Fe-2S iron-sulfur cluster binding domain CDIF29688_RS11935 PF00999 Sodium/hydrogen exchanger family CDIF29688_RS11955 PF00005 ABC transporter CDIF29688_RS11960 PF00271 Helicase conserved C-terminal domain CDIF29688_RS11960 PF00270 DEAD/DEAH box helicase CDIF29688_RS11965 PF00860 Permease family CDIF29688_RS11970 PF01554 MatE CDIF29688_RS11980 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29688_RS11985 PF08220 DeoR-like helix-turn-helix domain CDIF29688_RS11985 PF00455 DeoR C terminal sensor domain CDIF29688_RS11995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS11995 PF13426 PAS domain CDIF29688_RS11995 PF00672 HAMP domain CDIF29688_RS11995 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS12000 PF00072 Response regulator receiver domain CDIF29688_RS12000 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS12005 PF00403 Heavy-metal-associated domain CDIF29688_RS12020 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS12020 PF03144 Elongation factor Tu domain 2 CDIF29688_RS12020 PF00679 Elongation factor G C-terminus CDIF29688_RS12020 PF14492 Elongation Factor G, domain II CDIF29688_RS12025 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS12030 PF14821 Threonine synthase N terminus CDIF29688_RS12030 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS12035 PF08544 GHMP kinases C terminal CDIF29688_RS12035 PF00288 GHMP kinases N terminal domain CDIF29688_RS12065 PF00583 Acetyltransferase (GNAT) family CDIF29688_RS12090 PF04551 GcpE protein CDIF29688_RS12095 PF17820 PDZ domain CDIF29688_RS12095 PF02163 Peptidase family M50 CDIF29688_RS12100 PF13288 DXP reductoisomerase C-terminal domain CDIF29688_RS12100 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CDIF29688_RS12100 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CDIF29688_RS12115 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS12115 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS12115 PF00563 EAL domain CDIF29688_RS12130 PF01255 Putative undecaprenyl diphosphate synthase CDIF29688_RS12140 PF01765 Ribosome recycling factor CDIF29688_RS12145 PF00696 Amino acid kinase family CDIF29688_RS12150 PF00889 Elongation factor TS CDIF29688_RS12155 PF00318 Ribosomal protein S2 CDIF29688_RS12160 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29688_RS12160 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS12175 PF02659 Putative manganese efflux pump CDIF29688_RS12180 PF00488 MutS domain V CDIF29688_RS12180 PF01713 Smr domain CDIF29688_RS12185 PF01139 tRNA-splicing ligase RtcB CDIF29688_RS12195 PF04294 VanW like protein CDIF29688_RS12215 PF05343 M42 glutamyl aminopeptidase CDIF29688_RS12225 PF01926 50S ribosome-binding GTPase CDIF29688_RS12225 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDIF29688_RS12230 PF04055 Radical SAM superfamily CDIF29688_RS12230 PF06968 Biotin and Thiamin Synthesis associated domain CDIF29688_RS12245 PF00202 Aminotransferase class-III CDIF29688_RS12255 PF04892 VanZ like family CDIF29688_RS12270 PF02272 DHHA1 domain CDIF29688_RS12270 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CDIF29688_RS12270 PF01411 tRNA synthetases class II (A) CDIF29688_RS12280 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CDIF29688_RS12280 PF00056 lactate/malate dehydrogenase, NAD binding domain CDIF29688_RS12290 PF01641 SelR domain CDIF29688_RS12290 PF01625 Peptide methionine sulfoxide reductase CDIF29688_RS12295 PF01734 Patatin-like phospholipase CDIF29688_RS12300 PF03063 Prismane/CO dehydrogenase family CDIF29688_RS12320 PF13247 4Fe-4S dicluster domain CDIF29688_RS12320 PF12800 4Fe-4S binding domain CDIF29688_RS12325 PF01568 Molydopterin dinucleotide binding domain CDIF29688_RS12325 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CDIF29688_RS12325 PF00384 Molybdopterin oxidoreductase CDIF29688_RS12330 PF00176 SNF2 family N-terminal domain CDIF29688_RS12330 PF00271 Helicase conserved C-terminal domain CDIF29688_RS12330 PF04434 SWIM zinc finger CDIF29688_RS12335 PF00561 alpha/beta hydrolase fold CDIF29688_RS12345 PF00271 Helicase conserved C-terminal domain CDIF29688_RS12345 PF00270 DEAD/DEAH box helicase CDIF29688_RS12345 PF03880 DbpA RNA binding domain CDIF29688_RS12365 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CDIF29688_RS12365 PF13457 GW (Gly-Tryp) dipeptide domain CDIF29688_RS12370 PF03632 Glycosyl hydrolase family 65 central catalytic domain CDIF29688_RS12370 PF03633 Glycosyl hydrolase family 65, C-terminal domain CDIF29688_RS12370 PF03636 Glycosyl hydrolase family 65, N-terminal domain CDIF29688_RS12375 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS12380 PF00128 Alpha amylase, catalytic domain CDIF29688_RS12380 PF16657 Maltogenic Amylase, C-terminal domain CDIF29688_RS12380 PF02903 Alpha amylase, N-terminal ig-like domain CDIF29688_RS12385 PF02811 PHP domain CDIF29688_RS12395 PF08486 Stage II sporulation protein CDIF29688_RS12395 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS12400 PF00480 ROK family CDIF29688_RS12405 PF00210 Ferritin-like domain CDIF29688_RS12410 PF13380 CoA binding domain CDIF29688_RS12410 PF13607 Succinyl-CoA ligase like flavodoxin domain CDIF29688_RS12425 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29688_RS12425 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29688_RS12425 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29688_RS12435 PF00155 Aminotransferase class I and II CDIF29688_RS12450 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS12455 PF00756 Putative esterase CDIF29688_RS12460 PF01594 AI-2E family transporter CDIF29688_RS12465 PF00171 Aldehyde dehydrogenase family CDIF29688_RS12480 PF01926 50S ribosome-binding GTPase CDIF29688_RS12480 PF16360 GTP-binding GTPase Middle Region CDIF29688_RS12480 PF13167 GTP-binding GTPase N-terminal CDIF29688_RS12485 PF00005 ABC transporter CDIF29688_RS12485 PF00664 ABC transporter transmembrane region CDIF29688_RS12490 PF00664 ABC transporter transmembrane region CDIF29688_RS12490 PF00005 ABC transporter CDIF29688_RS12505 PF00484 Carbonic anhydrase CDIF29688_RS12525 PF01487 Type I 3-dehydroquinase CDIF29688_RS12535 PF02920 DNA binding domain of tn916 integrase CDIF29688_RS12535 PF00589 Phage integrase family CDIF29688_RS12565 PF13302 Acetyltransferase (GNAT) domain CDIF29688_RS12585 PF09035 Excisionase from transposon Tn916 CDIF29688_RS12590 PF00589 Phage integrase family CDIF29688_RS12590 PF02920 DNA binding domain of tn916 integrase CDIF29688_RS12595 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29688_RS12600 PF00919 Uncharacterized protein family UPF0004 CDIF29688_RS12600 PF01938 TRAM domain CDIF29688_RS12600 PF04055 Radical SAM superfamily CDIF29688_RS12615 PF01226 Formate/nitrite transporter CDIF29688_RS12620 PF13187 4Fe-4S dicluster domain CDIF29688_RS12620 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CDIF29688_RS12620 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CDIF29688_RS12625 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CDIF29688_RS12625 PF00175 Oxidoreductase NAD-binding domain CDIF29688_RS12630 PF17179 4Fe-4S dicluster domain CDIF29688_RS12635 PF13545 Crp-like helix-turn-helix domain CDIF29688_RS12635 PF00027 Cyclic nucleotide-binding domain CDIF29688_RS12640 PF01380 SIS domain CDIF29688_RS12640 PF01418 Helix-turn-helix domain, rpiR family CDIF29688_RS12645 PF00480 ROK family CDIF29688_RS12660 PF00474 Sodium:solute symporter family CDIF29688_RS12665 PF00701 Dihydrodipicolinate synthetase family CDIF29688_RS12670 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CDIF29688_RS12685 PF00563 EAL domain CDIF29688_RS12685 PF00360 Phytochrome region CDIF29688_RS12685 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS12685 PF01590 GAF domain CDIF29688_RS12690 PF00152 tRNA synthetases class II (D, K and N) CDIF29688_RS12690 PF01336 OB-fold nucleic acid binding domain CDIF29688_RS12700 PF05922 Peptidase inhibitor I9 CDIF29688_RS12700 PF02225 PA domain CDIF29688_RS12700 PF13860 FlgD Ig-like domain CDIF29688_RS12700 PF00082 Subtilase family CDIF29688_RS12705 PF00082 Subtilase family CDIF29688_RS12715 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS12715 PF06480 FtsH Extracellular CDIF29688_RS12715 PF17862 AAA+ lid domain CDIF29688_RS12715 PF01434 Peptidase family M41 CDIF29688_RS12730 PF04055 Radical SAM superfamily CDIF29688_RS12730 PF12544 Lysine-2,3-aminomutase CDIF29688_RS12735 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS12735 PF00155 Aminotransferase class I and II CDIF29688_RS12740 PF01177 Asp/Glu/Hydantoin racemase CDIF29688_RS12760 PF07883 Cupin domain CDIF29688_RS12765 PF00854 POT family CDIF29688_RS12770 PF00557 Metallopeptidase family M24 CDIF29688_RS12770 PF01321 Creatinase/Prolidase N-terminal domain CDIF29688_RS12775 PF00854 POT family CDIF29688_RS12795 PF00355 Rieske [2Fe-2S] domain CDIF29688_RS12795 PF01266 FAD dependent oxidoreductase CDIF29688_RS12800 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS12800 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS12805 PF00294 pfkB family carbohydrate kinase CDIF29688_RS12810 PF00874 PRD domain CDIF29688_RS12810 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS12810 PF05043 Mga helix-turn-helix domain CDIF29688_RS12810 PF08279 HTH domain CDIF29688_RS12815 PF13350 Tyrosine phosphatase family CDIF29688_RS12820 PF01594 AI-2E family transporter CDIF29688_RS12830 PF01131 DNA topoisomerase CDIF29688_RS12830 PF01751 Toprim domain CDIF29688_RS12835 PF01235 Sodium:alanine symporter family CDIF29688_RS12840 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29688_RS12845 PF00596 Class II Aldolase and Adducin N-terminal domain CDIF29688_RS12850 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29688_RS12850 PF00107 Zinc-binding dehydrogenase CDIF29688_RS12855 PF03611 PTS system sugar-specific permease component CDIF29688_RS12860 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS12865 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS12865 PF02378 Phosphotransferase system, EIIC CDIF29688_RS12865 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS12870 PF00158 Sigma-54 interaction domain CDIF29688_RS12870 PF03610 PTS system fructose IIA component CDIF29688_RS12870 PF00874 PRD domain CDIF29688_RS12890 PF00155 Aminotransferase class I and II CDIF29688_RS12890 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS12895 PF03591 AzlC protein CDIF29688_RS12905 PF16736 Single Cache-like CDIF29688_RS12905 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS12905 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS12905 PF00989 PAS fold CDIF29688_RS12915 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS12915 PF00072 Response regulator receiver domain CDIF29688_RS12965 PF10548 P22AR C-terminal domain CDIF29688_RS12965 PF02498 BRO family, N-terminal domain CDIF29688_RS13025 PF01381 Helix-turn-helix CDIF29688_RS13035 PF00313 'Cold-shock' DNA-binding domain CDIF29688_RS13045 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS13050 PF00005 ABC transporter CDIF29688_RS13050 PF08402 TOBE domain CDIF29688_RS13065 PF00072 Response regulator receiver domain CDIF29688_RS13065 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS13070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS13070 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS13075 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29688_RS13075 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29688_RS13075 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29688_RS13075 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29688_RS13080 PF00834 Ribulose-phosphate 3 epimerase family CDIF29688_RS13085 PF02502 Ribose/Galactose Isomerase CDIF29688_RS13090 PF02779 Transketolase, pyrimidine binding domain CDIF29688_RS13090 PF02780 Transketolase, C-terminal domain CDIF29688_RS13095 PF00456 Transketolase, thiamine diphosphate binding domain CDIF29688_RS13100 PF00107 Zinc-binding dehydrogenase CDIF29688_RS13100 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29688_RS13105 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29688_RS13105 PF00107 Zinc-binding dehydrogenase CDIF29688_RS13110 PF03611 PTS system sugar-specific permease component CDIF29688_RS13115 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS13125 PF03610 PTS system fructose IIA component CDIF29688_RS13125 PF00874 PRD domain CDIF29688_RS13125 PF00158 Sigma-54 interaction domain CDIF29688_RS13130 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29688_RS13135 PF00156 Phosphoribosyl transferase domain CDIF29688_RS13140 PF01232 Mannitol dehydrogenase Rossmann domain CDIF29688_RS13140 PF08125 Mannitol dehydrogenase C-terminal domain CDIF29688_RS13145 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS13150 PF00874 PRD domain CDIF29688_RS13150 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS13150 PF08279 HTH domain CDIF29688_RS13150 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS13150 PF05043 Mga helix-turn-helix domain CDIF29688_RS13155 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS13155 PF02378 Phosphotransferase system, EIIC CDIF29688_RS13160 PF00571 CBS domain CDIF29688_RS13160 PF00478 IMP dehydrogenase / GMP reductase domain CDIF29688_RS13165 PF05816 Toxic anion resistance protein (TelA) CDIF29688_RS13175 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS13180 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDIF29688_RS13180 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDIF29688_RS13190 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CDIF29688_RS13190 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CDIF29688_RS13195 PF00171 Aldehyde dehydrogenase family CDIF29688_RS13200 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CDIF29688_RS13200 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CDIF29688_RS13205 PF02080 TrkA-C domain CDIF29688_RS13205 PF06826 Predicted Permease Membrane Region CDIF29688_RS13205 PF02080 TrkA-C domain CDIF29688_RS13205 PF06826 Predicted Permease Membrane Region CDIF29688_RS13210 PF03466 LysR substrate binding domain CDIF29688_RS13210 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS13220 PF00557 Metallopeptidase family M24 CDIF29688_RS13220 PF01321 Creatinase/Prolidase N-terminal domain CDIF29688_RS13225 PF02504 Fatty acid synthesis protein CDIF29688_RS13230 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CDIF29688_RS13245 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29688_RS13250 PF00085 Thioredoxin CDIF29688_RS13255 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS13285 PF00005 ABC transporter CDIF29688_RS13295 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS13335 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CDIF29688_RS13335 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CDIF29688_RS13340 PF00890 FAD binding domain CDIF29688_RS13345 PF02445 Quinolinate synthetase A protein CDIF29688_RS13350 PF02554 Carbon starvation protein CstA CDIF29688_RS13365 PF01594 AI-2E family transporter CDIF29688_RS13370 PF00293 NUDIX domain CDIF29688_RS13380 PF00871 Acetokinase family CDIF29688_RS13400 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS13400 PF13426 PAS domain CDIF29688_RS13400 PF00158 Sigma-54 interaction domain CDIF29688_RS13405 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS13410 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS13425 PF01070 FMN-dependent dehydrogenase CDIF29688_RS13435 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS13435 PF05569 BlaR1 peptidase M56 CDIF29688_RS13440 PF03965 Penicillinase repressor CDIF29688_RS13455 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS13455 PF05569 BlaR1 peptidase M56 CDIF29688_RS13460 PF03965 Penicillinase repressor CDIF29688_RS13475 PF03484 tRNA synthetase B5 domain CDIF29688_RS13475 PF01588 Putative tRNA binding domain CDIF29688_RS13475 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CDIF29688_RS13475 PF03483 B3/4 domain CDIF29688_RS13475 PF03147 Ferredoxin-fold anticodon binding domain CDIF29688_RS13480 PF00912 Transglycosylase CDIF29688_RS13485 PF02811 PHP domain CDIF29688_RS13485 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29688_RS13485 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29688_RS13485 PF14579 Helix-hairpin-helix motif CDIF29688_RS13485 PF00929 Exonuclease CDIF29688_RS13505 PF01171 PP-loop family CDIF29688_RS13520 PF05067 Manganese containing catalase CDIF29688_RS13525 PF08239 Bacterial SH3 domain CDIF29688_RS13525 PF01476 LysM domain CDIF29688_RS13525 PF00877 NlpC/P60 family CDIF29688_RS13530 PF00692 dUTPase CDIF29688_RS13535 PF01751 Toprim domain CDIF29688_RS13535 PF01131 DNA topoisomerase CDIF29688_RS13550 PF00873 AcrB/AcrD/AcrF family CDIF29688_RS13565 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29688_RS13565 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CDIF29688_RS13565 PF00391 PEP-utilising enzyme, mobile domain CDIF29688_RS13570 PF03618 Kinase/pyrophosphorylase CDIF29688_RS13575 PF08279 HTH domain CDIF29688_RS13575 PF00571 CBS domain CDIF29688_RS13595 PF05043 Mga helix-turn-helix domain CDIF29688_RS13595 PF00874 PRD domain CDIF29688_RS13595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS13595 PF08279 HTH domain CDIF29688_RS13600 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CDIF29688_RS13600 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CDIF29688_RS13605 PF03608 PTS system enzyme II sorbitol-specific factor CDIF29688_RS13610 PF12833 Helix-turn-helix domain CDIF29688_RS13620 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS13620 PF07687 Peptidase dimerisation domain CDIF29688_RS13625 PF01235 Sodium:alanine symporter family CDIF29688_RS13630 PF07690 Major Facilitator Superfamily CDIF29688_RS13635 PF00155 Aminotransferase class I and II CDIF29688_RS13640 PF01515 Phosphate acetyl/butaryl transferase CDIF29688_RS13645 PF00871 Acetokinase family CDIF29688_RS13660 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29688_RS13660 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29688_RS13660 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29688_RS13670 PF09339 IclR helix-turn-helix domain CDIF29688_RS13670 PF01614 Bacterial transcriptional regulator CDIF29688_RS13680 PF02092 Glycyl-tRNA synthetase beta subunit CDIF29688_RS13680 PF05746 DALR anticodon binding domain CDIF29688_RS13685 PF02091 Glycyl-tRNA synthetase alpha subunit CDIF29688_RS13695 PF02565 Recombination protein O C terminal CDIF29688_RS13695 PF11967 Recombination protein O N terminal CDIF29688_RS13705 PF00571 CBS domain CDIF29688_RS13705 PF03448 MgtE intracellular N domain CDIF29688_RS13705 PF01769 Divalent cation transporter CDIF29688_RS13710 PF07650 KH domain CDIF29688_RS13710 PF01926 50S ribosome-binding GTPase CDIF29688_RS13715 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CDIF29688_RS13720 PF01219 Prokaryotic diacylglycerol kinase CDIF29688_RS13725 PF02130 Uncharacterized protein family UPF0054 CDIF29688_RS13730 PF02562 PhoH-like protein CDIF29688_RS13745 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CDIF29688_RS13745 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CDIF29688_RS13750 PF03073 TspO/MBR family CDIF29688_RS13755 PF09424 Yqey-like protein CDIF29688_RS13760 PF01165 Ribosomal protein S21 CDIF29688_RS13765 PF01230 HIT domain CDIF29688_RS13770 PF00919 Uncharacterized protein family UPF0004 CDIF29688_RS13770 PF01938 TRAM domain CDIF29688_RS13770 PF04055 Radical SAM superfamily CDIF29688_RS13775 PF04452 RNA methyltransferase CDIF29688_RS13785 PF18019 HD domain CDIF29688_RS13785 PF18395 Cas3 C-terminal domain CDIF29688_RS13785 PF00270 DEAD/DEAH box helicase CDIF29688_RS13810 PF17912 MalK OB fold domain CDIF29688_RS13810 PF00005 ABC transporter CDIF29688_RS13810 PF03459 TOBE domain CDIF29688_RS13815 PF17853 GGDEF-like domain CDIF29688_RS13815 PF07905 Purine catabolism regulatory protein-like family CDIF29688_RS13815 PF13556 PucR C-terminal helix-turn-helix domain CDIF29688_RS13820 PF07690 Major Facilitator Superfamily CDIF29688_RS13825 PF00480 ROK family CDIF29688_RS13835 PF00226 DnaJ domain CDIF29688_RS13835 PF00684 DnaJ central domain CDIF29688_RS13835 PF01556 DnaJ C terminal domain CDIF29688_RS13840 PF00012 Hsp70 protein CDIF29688_RS13845 PF01025 GrpE CDIF29688_RS13850 PF01628 HrcA protein C terminal domain CDIF29688_RS13855 PF06969 HemN C-terminal domain CDIF29688_RS13855 PF04055 Radical SAM superfamily CDIF29688_RS13860 PF13520 Amino acid permease CDIF29688_RS13865 PF13735 tRNA nucleotidyltransferase domain 2 putative CDIF29688_RS13865 PF12627 Probable RNA and SrmB- binding site of polymerase A CDIF29688_RS13865 PF01743 Poly A polymerase head domain CDIF29688_RS13870 PF00679 Elongation factor G C-terminus CDIF29688_RS13870 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS13870 PF06421 GTP-binding protein LepA C-terminus CDIF29688_RS13870 PF03144 Elongation factor Tu domain 2 CDIF29688_RS13885 PF03418 Germination protease CDIF29688_RS13905 PF01649 Ribosomal protein S20 CDIF29688_RS13915 PF13567 Domain of unknown function (DUF4131) CDIF29688_RS13915 PF03772 Competence protein CDIF29688_RS13915 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS13935 PF00899 ThiF family CDIF29688_RS13940 PF01476 LysM domain CDIF29688_RS13940 PF06725 3D domain CDIF29688_RS13945 PF03167 Uracil DNA glycosylase superfamily CDIF29688_RS13955 PF02424 ApbE family CDIF29688_RS13960 PF00155 Aminotransferase class I and II CDIF29688_RS13965 PF00557 Metallopeptidase family M24 CDIF29688_RS13965 PF01321 Creatinase/Prolidase N-terminal domain CDIF29688_RS13970 PF02378 Phosphotransferase system, EIIC CDIF29688_RS13975 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS13980 PF05524 PEP-utilising enzyme, N-terminal CDIF29688_RS13980 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29688_RS13980 PF00381 PTS HPr component phosphorylation site CDIF29688_RS13980 PF00391 PEP-utilising enzyme, mobile domain CDIF29688_RS13980 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS13985 PF08279 HTH domain CDIF29688_RS13985 PF00874 PRD domain CDIF29688_RS13985 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS13985 PF05043 Mga helix-turn-helix domain CDIF29688_RS13990 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS13995 PF01238 Phosphomannose isomerase type I CDIF29688_RS14000 PF00672 HAMP domain CDIF29688_RS14000 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS14000 PF18698 Histidine kinase sensor domain CDIF29688_RS14000 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS14000 PF00989 PAS fold CDIF29688_RS14005 PF09107 Elongation factor SelB, winged helix CDIF29688_RS14005 PF09105 Elongation factor SelB, winged helix CDIF29688_RS14005 PF03144 Elongation factor Tu domain 2 CDIF29688_RS14005 PF00009 Elongation factor Tu GTP binding domain CDIF29688_RS14005 PF09106 Elongation factor SelB, winged helix CDIF29688_RS14010 PF12390 Selenocysteine synthase N terminal CDIF29688_RS14010 PF03841 L-seryl-tRNA selenium transferase CDIF29688_RS14020 PF10531 SLBB domain CDIF29688_RS14025 PF07943 Penicillin-binding protein 5, C-terminal domain CDIF29688_RS14025 PF00768 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS14035 PF14698 Argininosuccinate lyase C-terminal CDIF29688_RS14035 PF00206 Lyase CDIF29688_RS14045 PF00155 Aminotransferase class I and II CDIF29688_RS14050 PF00690 Cation transporter/ATPase, N-terminus CDIF29688_RS14050 PF00689 Cation transporting ATPase, C-terminus CDIF29688_RS14055 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS14060 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS14065 PF07690 Major Facilitator Superfamily CDIF29688_RS14075 PF12833 Helix-turn-helix domain CDIF29688_RS14075 PF02311 AraC-like ligand binding domain CDIF29688_RS14080 PF02056 Family 4 glycosyl hydrolase CDIF29688_RS14080 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29688_RS14085 PF02378 Phosphotransferase system, EIIC CDIF29688_RS14085 PF00367 phosphotransferase system, EIIB CDIF29688_RS14090 PF03123 CAT RNA binding domain CDIF29688_RS14090 PF00874 PRD domain CDIF29688_RS14100 PF01042 Endoribonuclease L-PSP CDIF29688_RS14105 PF13291 ACT domain CDIF29688_RS14105 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS14110 PF00155 Aminotransferase class I and II CDIF29688_RS14115 PF17763 Glutaminase/Asparaginase C-terminal domain CDIF29688_RS14115 PF00710 Asparaginase, N-terminal CDIF29688_RS14135 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29688_RS14135 PF00589 Phage integrase family CDIF29688_RS14145 PF09334 tRNA synthetases class I (M) CDIF29688_RS14145 PF13603 Leucyl-tRNA synthetase, Domain 2 CDIF29688_RS14145 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29688_RS14145 PF08264 Anticodon-binding domain of tRNA CDIF29688_RS14155 PF01966 HD domain CDIF29688_RS14160 PF01467 Cytidylyltransferase-like CDIF29688_RS14165 PF02631 RecX family CDIF29688_RS14170 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CDIF29688_RS14170 PF02806 Alpha amylase, C-terminal all-beta domain CDIF29688_RS14170 PF00128 Alpha amylase, catalytic domain CDIF29688_RS14175 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS14175 PF17932 Tetracyclin repressor-like, C-terminal domain CDIF29688_RS14200 PF00266 Aminotransferase class-V CDIF29688_RS14210 PF12704 MacB-like periplasmic core domain CDIF29688_RS14210 PF00005 ABC transporter CDIF29688_RS14210 PF02687 FtsX-like permease family CDIF29688_RS14215 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS14215 PF18698 Histidine kinase sensor domain CDIF29688_RS14215 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS14215 PF00672 HAMP domain CDIF29688_RS14220 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS14220 PF00072 Response regulator receiver domain CDIF29688_RS14225 PF00149 Calcineurin-like phosphoesterase CDIF29688_RS14225 PF02872 5'-nucleotidase, C-terminal domain CDIF29688_RS14235 PF12706 Beta-lactamase superfamily domain CDIF29688_RS14240 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29688_RS14240 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS14245 PF00375 Sodium:dicarboxylate symporter family CDIF29688_RS14255 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29688_RS14270 PF03425 Carbohydrate binding domain (family 11) CDIF29688_RS14270 PF00150 Cellulase (glycosyl hydrolase family 5) CDIF29688_RS14270 PF02156 Glycosyl hydrolase family 26 CDIF29688_RS14270 PF00404 Dockerin type I domain CDIF29688_RS14280 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS14285 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS14300 PF13580 SIS domain CDIF29688_RS14305 PF03611 PTS system sugar-specific permease component CDIF29688_RS14310 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS14315 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS14325 PF01467 Cytidylyltransferase-like CDIF29688_RS14335 PF17191 RecG wedge domain CDIF29688_RS14335 PF00270 DEAD/DEAH box helicase CDIF29688_RS14335 PF00271 Helicase conserved C-terminal domain CDIF29688_RS14340 PF13684 Dihydroxyacetone kinase family CDIF29688_RS14340 PF02734 DAK2 domain CDIF29688_RS14345 PF03780 Asp23 family, cell envelope-related function CDIF29688_RS14350 PF00830 Ribosomal L28 family CDIF29688_RS14365 PF13411 MerR HTH family regulatory protein CDIF29688_RS14365 PF07739 TipAS antibiotic-recognition domain CDIF29688_RS14370 PF05043 Mga helix-turn-helix domain CDIF29688_RS14370 PF00874 PRD domain CDIF29688_RS14370 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS14370 PF08279 HTH domain CDIF29688_RS14375 PF08279 HTH domain CDIF29688_RS14375 PF05043 Mga helix-turn-helix domain CDIF29688_RS14375 PF00874 PRD domain CDIF29688_RS14375 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS14380 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS14395 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS14395 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS14400 PF00072 Response regulator receiver domain CDIF29688_RS14400 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS14415 PF04263 Thiamin pyrophosphokinase, catalytic domain CDIF29688_RS14415 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CDIF29688_RS14420 PF00834 Ribulose-phosphate 3 epimerase family CDIF29688_RS14425 PF16745 RsgA N-terminal domain CDIF29688_RS14425 PF03193 RsgA GTPase CDIF29688_RS14435 PF00069 Protein kinase domain CDIF29688_RS14435 PF03793 PASTA domain CDIF29688_RS14445 PF04055 Radical SAM superfamily CDIF29688_RS14450 PF01189 16S rRNA methyltransferase RsmB/F CDIF29688_RS14450 PF01029 NusB family CDIF29688_RS14455 PF04298 Putative neutral zinc metallopeptidase CDIF29688_RS14465 PF02911 Formyl transferase, C-terminal domain CDIF29688_RS14465 PF00551 Formyl transferase CDIF29688_RS14470 PF01327 Polypeptide deformylase CDIF29688_RS14475 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CDIF29688_RS14475 PF04851 Type III restriction enzyme, res subunit CDIF29688_RS14475 PF18074 Primosomal protein N C-terminal domain CDIF29688_RS14475 PF00271 Helicase conserved C-terminal domain CDIF29688_RS14475 PF17764 3′ DNA-binding domain (3′BD) CDIF29688_RS14480 PF02441 Flavoprotein CDIF29688_RS14480 PF04127 DNA / pantothenate metabolism flavoprotein CDIF29688_RS14485 PF01192 RNA polymerase Rpb6 CDIF29688_RS14490 PF00625 Guanylate kinase CDIF29688_RS14495 PF03755 YicC-like family, N-terminal region CDIF29688_RS14495 PF08340 Domain of unknown function (DUF1732) CDIF29688_RS14500 PF01678 Diaminopimelate epimerase CDIF29688_RS14505 PF01212 Beta-eliminating lyase CDIF29688_RS14510 PF05670 NFACT protein RNA binding domain CDIF29688_RS14515 PF12848 ABC transporter CDIF29688_RS14515 PF00005 ABC transporter CDIF29688_RS14515 PF16326 ABC transporter C-terminal domain CDIF29688_RS14520 PF00860 Permease family CDIF29688_RS14525 PF00156 Phosphoribosyl transferase domain CDIF29688_RS14530 PF00849 RNA pseudouridylate synthase CDIF29688_RS14530 PF01479 S4 domain CDIF29688_RS14535 PF01252 Signal peptidase (SPase) II CDIF29688_RS14540 PF01522 Polysaccharide deacetylase CDIF29688_RS14545 PF01258 Prokaryotic dksA/traR C4-type zinc finger CDIF29688_RS14550 PF02554 Carbon starvation protein CstA CDIF29688_RS14555 PF00072 Response regulator receiver domain CDIF29688_RS14555 PF04397 LytTr DNA-binding domain CDIF29688_RS14560 PF06580 Histidine kinase CDIF29688_RS14560 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS14560 PF07694 5TMR of 5TMR-LYT CDIF29688_RS14565 PF00579 tRNA synthetases class I (W and Y) CDIF29688_RS14570 PF01048 Phosphorylase superfamily CDIF29688_RS14575 PF13520 Amino acid permease CDIF29688_RS14580 PF00557 Metallopeptidase family M24 CDIF29688_RS14580 PF01321 Creatinase/Prolidase N-terminal domain CDIF29688_RS14585 PF02645 Uncharacterised protein, DegV family COG1307 CDIF29688_RS14590 PF08360 QacR-like protein, C-terminal region CDIF29688_RS14590 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS14600 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29688_RS14600 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29688_RS14605 PF08264 Anticodon-binding domain of tRNA CDIF29688_RS14605 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29688_RS14610 PF05103 DivIVA protein CDIF29688_RS14615 PF01479 S4 domain CDIF29688_RS14615 PF17774 Putative RNA-binding domain in YlmH CDIF29688_RS14625 PF04472 Cell division protein SepF CDIF29688_RS14630 PF01168 Alanine racemase, N-terminal domain CDIF29688_RS14645 PF05167 Uncharacterised ACR (DUF711) CDIF29688_RS14660 PF09547 Stage IV sporulation protein A (spore_IV_A) CDIF29688_RS14665 PF07690 Major Facilitator Superfamily CDIF29688_RS14670 PF13520 Amino acid permease CDIF29688_RS14675 PF00557 Metallopeptidase family M24 CDIF29688_RS14675 PF01321 Creatinase/Prolidase N-terminal domain CDIF29688_RS14680 PF00440 Bacterial regulatory proteins, tetR family CDIF29688_RS14685 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CDIF29688_RS14685 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CDIF29688_RS14690 PF02660 Glycerol-3-phosphate acyltransferase CDIF29688_RS14695 PF01926 50S ribosome-binding GTPase CDIF29688_RS14695 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CDIF29688_RS14710 PF14045 YIEGIA protein CDIF29688_RS14715 PF14045 YIEGIA protein CDIF29688_RS14720 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS14720 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS14720 PF16736 Single Cache-like CDIF29688_RS14720 PF00989 PAS fold CDIF29688_RS14725 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS14725 PF00072 Response regulator receiver domain CDIF29688_RS14730 PF02578 Multi-copper polyphenol oxidoreductase laccase CDIF29688_RS14735 PF03477 ATP cone domain CDIF29688_RS14740 PF05239 PRC-barrel domain CDIF29688_RS14745 PF04539 Sigma-70 region 3 CDIF29688_RS14745 PF04545 Sigma-70, region 4 CDIF29688_RS14745 PF04542 Sigma-70 region 2 CDIF29688_RS14750 PF04545 Sigma-70, region 4 CDIF29688_RS14750 PF04542 Sigma-70 region 2 CDIF29688_RS14755 PF03419 Sporulation factor SpoIIGA CDIF29688_RS14765 PF00091 Tubulin/FtsZ family, GTPase domain CDIF29688_RS14765 PF12327 FtsZ family, C-terminal domain CDIF29688_RS14770 PF06947 Protein of unknown function (DUF1290) CDIF29688_RS14785 PF03799 Cell division protein FtsQ CDIF29688_RS14785 PF08478 POTRA domain, FtsQ-type CDIF29688_RS14790 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29688_RS14790 PF03033 Glycosyltransferase family 28 N-terminal domain CDIF29688_RS14795 PF01098 Cell cycle protein CDIF29688_RS14800 PF08245 Mur ligase middle domain CDIF29688_RS14800 PF02875 Mur ligase family, glutamate ligase domain CDIF29688_RS14805 PF00953 Glycosyl transferase family 4 CDIF29688_RS14805 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CDIF29688_RS14810 PF02875 Mur ligase family, glutamate ligase domain CDIF29688_RS14810 PF08245 Mur ligase middle domain CDIF29688_RS14810 PF01225 Mur ligase family, catalytic domain CDIF29688_RS14815 PF03717 Penicillin-binding Protein dimerisation domain CDIF29688_RS14815 PF00905 Penicillin binding protein transpeptidase domain CDIF29688_RS14815 PF03793 PASTA domain CDIF29688_RS14825 PF01795 MraW methylase family CDIF29688_RS14830 PF01790 Prolipoprotein diacylglyceryl transferase CDIF29688_RS14835 PF05193 Peptidase M16 inactive domain CDIF29688_RS14835 PF00675 Insulinase (Peptidase family M16) CDIF29688_RS14845 PF06071 Protein of unknown function (DUF933) CDIF29688_RS14845 PF01926 50S ribosome-binding GTPase CDIF29688_RS14850 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS14850 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS14850 PF00563 EAL domain CDIF29688_RS14855 PF02875 Mur ligase family, glutamate ligase domain CDIF29688_RS14855 PF01225 Mur ligase family, catalytic domain CDIF29688_RS14855 PF08245 Mur ligase middle domain CDIF29688_RS14860 PF12833 Helix-turn-helix domain CDIF29688_RS14865 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS14865 PF00367 phosphotransferase system, EIIB CDIF29688_RS14865 PF02378 Phosphotransferase system, EIIC CDIF29688_RS14870 PF03123 CAT RNA binding domain CDIF29688_RS14870 PF00874 PRD domain CDIF29688_RS14875 PF00999 Sodium/hydrogen exchanger family CDIF29688_RS14880 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29688_RS14880 PF00005 ABC transporter CDIF29688_RS14885 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CDIF29688_RS14885 PF00005 ABC transporter CDIF29688_RS14890 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CDIF29688_RS14895 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS14900 PF12911 N-terminal TM domain of oligopeptide transport permease C CDIF29688_RS14900 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS14905 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS14905 PF03466 LysR substrate binding domain CDIF29688_RS14910 PF02803 Thiolase, C-terminal domain CDIF29688_RS14910 PF00108 Thiolase, N-terminal domain CDIF29688_RS14915 PF01144 Coenzyme A transferase CDIF29688_RS14920 PF01144 Coenzyme A transferase CDIF29688_RS14935 PF00188 Cysteine-rich secretory protein family CDIF29688_RS14945 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CDIF29688_RS14945 PF10371 Domain of unknown function CDIF29688_RS14945 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CDIF29688_RS14945 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CDIF29688_RS14945 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CDIF29688_RS14950 PF06130 Phosphate propanoyltransferase CDIF29688_RS14980 PF00269 Small, acid-soluble spore proteins, alpha/beta type CDIF29688_RS14990 PF01569 PAP2 superfamily CDIF29688_RS14995 PF00156 Phosphoribosyl transferase domain CDIF29688_RS15000 PF00155 Aminotransferase class I and II CDIF29688_RS15015 PF03590 Aspartate-ammonia ligase CDIF29688_RS15020 PF00155 Aminotransferase class I and II CDIF29688_RS15025 PF07687 Peptidase dimerisation domain CDIF29688_RS15025 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS15035 PF07670 Nucleoside recognition CDIF29688_RS15040 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS15040 PF13426 PAS domain CDIF29688_RS15040 PF00158 Sigma-54 interaction domain CDIF29688_RS15050 PF05525 Branched-chain amino acid transport protein CDIF29688_RS15060 PF00860 Permease family CDIF29688_RS15065 PF01979 Amidohydrolase family CDIF29688_RS15075 PF07690 Major Facilitator Superfamily CDIF29688_RS15080 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CDIF29688_RS15080 PF08501 Shikimate dehydrogenase substrate binding domain CDIF29688_RS15085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS15085 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29688_RS15095 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS15095 PF03466 LysR substrate binding domain CDIF29688_RS15105 PF03734 L,D-transpeptidase catalytic domain CDIF29688_RS15105 PF01476 LysM domain CDIF29688_RS15110 PF16363 GDP-mannose 4,6 dehydratase CDIF29688_RS15115 PF00483 Nucleotidyl transferase CDIF29688_RS15140 PF04203 Sortase domain CDIF29688_RS15160 PF01522 Polysaccharide deacetylase CDIF29688_RS15170 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS15175 PF00072 Response regulator receiver domain CDIF29688_RS15175 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS15190 PF04101 Glycosyltransferase family 28 C-terminal domain CDIF29688_RS15190 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CDIF29688_RS15195 PF00464 Serine hydroxymethyltransferase CDIF29688_RS15215 PF02583 Metal-sensitive transcriptional repressor CDIF29688_RS15225 PF13426 PAS domain CDIF29688_RS15225 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS15225 PF00158 Sigma-54 interaction domain CDIF29688_RS15230 PF00155 Aminotransferase class I and II CDIF29688_RS15235 PF03553 Na+/H+ antiporter family CDIF29688_RS15245 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS15245 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS15250 PF03466 LysR substrate binding domain CDIF29688_RS15250 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS15255 PF00795 Carbon-nitrogen hydrolase CDIF29688_RS15265 PF01336 OB-fold nucleic acid binding domain CDIF29688_RS15265 PF02938 GAD domain CDIF29688_RS15265 PF00152 tRNA synthetases class II (D, K and N) CDIF29688_RS15270 PF13393 Histidyl-tRNA synthetase CDIF29688_RS15270 PF03129 Anticodon binding domain CDIF29688_RS15275 PF04055 Radical SAM superfamily CDIF29688_RS15280 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS15285 PF02580 D-Tyr-tRNA(Tyr) deacylase CDIF29688_RS15290 PF13291 ACT domain CDIF29688_RS15290 PF02824 TGS domain CDIF29688_RS15290 PF04607 Region found in RelA / SpoT proteins CDIF29688_RS15295 PF00156 Phosphoribosyl transferase domain CDIF29688_RS15300 PF02272 DHHA1 domain CDIF29688_RS15300 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CDIF29688_RS15300 PF01368 DHH family CDIF29688_RS15300 PF17768 RecJ OB domain CDIF29688_RS15305 PF03109 ABC1 family CDIF29688_RS15310 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29688_RS15340 PF00391 PEP-utilising enzyme, mobile domain CDIF29688_RS15340 PF05524 PEP-utilising enzyme, N-terminal CDIF29688_RS15340 PF02896 PEP-utilising enzyme, TIM barrel domain CDIF29688_RS15345 PF00381 PTS HPr component phosphorylation site CDIF29688_RS15355 PF07669 Eco57I restriction-modification methylase CDIF29688_RS15355 PF12950 TaqI-like C-terminal specificity domain CDIF29688_RS15365 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS15365 PF00563 EAL domain CDIF29688_RS15365 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS15370 PF08239 Bacterial SH3 domain CDIF29688_RS15370 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS15375 PF01255 Putative undecaprenyl diphosphate synthase CDIF29688_RS15390 PF03816 Cell envelope-related transcriptional attenuator domain CDIF29688_RS15395 PF03816 Cell envelope-related transcriptional attenuator domain CDIF29688_RS15400 PF02638 Glycosyl hydrolase-like 10 CDIF29688_RS15405 PF01476 LysM domain CDIF29688_RS15405 PF08239 Bacterial SH3 domain CDIF29688_RS15405 PF00877 NlpC/P60 family CDIF29688_RS15410 PF02719 Polysaccharide biosynthesis protein CDIF29688_RS15415 PF13439 Glycosyltransferase Family 4 CDIF29688_RS15415 PF00534 Glycosyl transferases group 1 CDIF29688_RS15420 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CDIF29688_RS15420 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CDIF29688_RS15420 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CDIF29688_RS15425 PF00535 Glycosyl transferase family 2 CDIF29688_RS15430 PF00535 Glycosyl transferase family 2 CDIF29688_RS15435 PF00535 Glycosyl transferase family 2 CDIF29688_RS15440 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CDIF29688_RS15440 PF00535 Glycosyl transferase family 2 CDIF29688_RS15445 PF00535 Glycosyl transferase family 2 CDIF29688_RS15460 PF00483 Nucleotidyl transferase CDIF29688_RS15460 PF01050 Mannose-6-phosphate isomerase CDIF29688_RS15465 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CDIF29688_RS15465 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CDIF29688_RS15465 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CDIF29688_RS15465 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CDIF29688_RS15470 PF03023 Lipid II flippase MurJ CDIF29688_RS15475 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS15475 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS15480 PF02397 Bacterial sugar transferase CDIF29688_RS15485 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS15485 PF08239 Bacterial SH3 domain CDIF29688_RS15495 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS15495 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS15505 PF04138 GtrA-like protein CDIF29688_RS15525 PF07517 SecA DEAD-like domain CDIF29688_RS15525 PF01043 SecA preprotein cross-linking domain CDIF29688_RS15525 PF07516 SecA Wing and Scaffold domain CDIF29688_RS15560 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS15560 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS15575 PF02699 Preprotein translocase subunit CDIF29688_RS15580 PF01702 Queuine tRNA-ribosyltransferase CDIF29688_RS15590 PF02547 Queuosine biosynthesis protein CDIF29688_RS15595 PF17864 RuvB AAA lid domain CDIF29688_RS15595 PF05496 Holliday junction DNA helicase RuvB P-loop domain CDIF29688_RS15595 PF05491 RuvB C-terminal winged helix domain CDIF29688_RS15600 PF07499 RuvA, C-terminal domain CDIF29688_RS15600 PF01330 RuvA N terminal domain CDIF29688_RS15605 PF02075 Crossover junction endodeoxyribonuclease RuvC CDIF29688_RS15630 PF02447 GntP family permease CDIF29688_RS15635 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CDIF29688_RS15635 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CDIF29688_RS15640 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS15640 PF07729 FCD domain CDIF29688_RS15655 PF00664 ABC transporter transmembrane region CDIF29688_RS15655 PF00005 ABC transporter CDIF29688_RS15660 PF00664 ABC transporter transmembrane region CDIF29688_RS15660 PF00005 ABC transporter CDIF29688_RS15675 PF07670 Nucleoside recognition CDIF29688_RS15680 PF07670 Nucleoside recognition CDIF29688_RS15685 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS15685 PF07687 Peptidase dimerisation domain CDIF29688_RS15705 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29688_RS15705 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS15715 PF00155 Aminotransferase class I and II CDIF29688_RS15720 PF00892 EamA-like transporter family CDIF29688_RS15725 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CDIF29688_RS15735 PF01545 Cation efflux family CDIF29688_RS15735 PF16916 Dimerisation domain of Zinc Transporter CDIF29688_RS15745 PF00689 Cation transporting ATPase, C-terminus CDIF29688_RS15745 PF00690 Cation transporter/ATPase, N-terminus CDIF29688_RS15750 PF00464 Serine hydroxymethyltransferase CDIF29688_RS15755 PF03806 AbgT putative transporter family CDIF29688_RS15760 PF07687 Peptidase dimerisation domain CDIF29688_RS15760 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS15770 PF08769 Sporulation initiation factor Spo0A C terminal CDIF29688_RS15770 PF00072 Response regulator receiver domain CDIF29688_RS15780 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CDIF29688_RS15780 PF02403 Seryl-tRNA synthetase N-terminal domain CDIF29688_RS15785 PF07969 Amidohydrolase family CDIF29688_RS15790 PF00795 Carbon-nitrogen hydrolase CDIF29688_RS15795 PF00107 Zinc-binding dehydrogenase CDIF29688_RS15795 PF08240 Alcohol dehydrogenase GroES-like domain CDIF29688_RS15805 PF02915 Rubrerythrin CDIF29688_RS15810 PF13171 Protein of unknown function (DUF4004) CDIF29688_RS15825 PF00266 Aminotransferase class-V CDIF29688_RS15825 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS15830 PF08220 DeoR-like helix-turn-helix domain CDIF29688_RS15830 PF00455 DeoR C terminal sensor domain CDIF29688_RS15835 PF00550 Phosphopantetheine attachment site CDIF29688_RS15840 PF03062 MBOAT, membrane-bound O-acyltransferase family CDIF29688_RS15845 PF13193 AMP-binding enzyme C-terminal domain CDIF29688_RS15845 PF00501 AMP-binding enzyme CDIF29688_RS15855 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CDIF29688_RS15855 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDIF29688_RS15865 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS15870 PF03471 Transporter associated domain CDIF29688_RS15870 PF00571 CBS domain CDIF29688_RS15870 PF01595 Cyclin M transmembrane N-terminal domain CDIF29688_RS15875 PF07969 Amidohydrolase family CDIF29688_RS15895 PF00989 PAS fold CDIF29688_RS15895 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS15895 PF00158 Sigma-54 interaction domain CDIF29688_RS15900 PF00561 alpha/beta hydrolase fold CDIF29688_RS15900 PF08386 TAP-like protein CDIF29688_RS15910 PF01523 Putative modulator of DNA gyrase CDIF29688_RS15915 PF01523 Putative modulator of DNA gyrase CDIF29688_RS15925 PF00158 Sigma-54 interaction domain CDIF29688_RS15925 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS15925 PF13426 PAS domain CDIF29688_RS15930 PF03812 2-keto-3-deoxygluconate permease CDIF29688_RS15940 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDIF29688_RS15945 PF00563 EAL domain CDIF29688_RS15945 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS15945 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS15950 PF01554 MatE CDIF29688_RS15955 PF00005 ABC transporter CDIF29688_RS15960 PF01032 FecCD transport family CDIF29688_RS15965 PF01032 FecCD transport family CDIF29688_RS15980 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29688_RS15985 PF04794 YdjC-like protein CDIF29688_RS15990 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29688_RS15990 PF02056 Family 4 glycosyl hydrolase CDIF29688_RS15995 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16000 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16005 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS16005 PF07702 UTRA domain CDIF29688_RS16010 PF01554 MatE CDIF29688_RS16015 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS16020 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS16025 PF08402 TOBE domain CDIF29688_RS16025 PF00005 ABC transporter CDIF29688_RS16035 PF01813 ATP synthase subunit D CDIF29688_RS16040 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29688_RS16040 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29688_RS16045 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29688_RS16045 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29688_RS16045 PF16886 ATPsynthase alpha/beta subunit N-term extension CDIF29688_RS16050 PF01990 ATP synthase (F/14-kDa) subunit CDIF29688_RS16060 PF01991 ATP synthase (E/31 kDa) subunit CDIF29688_RS16065 PF00137 ATP synthase subunit C CDIF29688_RS16070 PF01496 V-type ATPase 116kDa subunit family CDIF29688_RS16095 PF03707 Bacterial signalling protein N terminal repeat CDIF29688_RS16095 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS16095 PF00563 EAL domain CDIF29688_RS16100 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS16100 PF00171 Aldehyde dehydrogenase family CDIF29688_RS16110 PF02441 Flavoprotein CDIF29688_RS16120 PF00501 AMP-binding enzyme CDIF29688_RS16120 PF13193 AMP-binding enzyme C-terminal domain CDIF29688_RS16125 PF02803 Thiolase, C-terminal domain CDIF29688_RS16125 PF00108 Thiolase, N-terminal domain CDIF29688_RS16130 PF02632 BioY family CDIF29688_RS16150 PF02687 FtsX-like permease family CDIF29688_RS16155 PF00005 ABC transporter CDIF29688_RS16160 PF02673 Bacitracin resistance protein BacA CDIF29688_RS16165 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS16170 PF00072 Response regulator receiver domain CDIF29688_RS16170 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS16180 PF00005 ABC transporter CDIF29688_RS16185 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS16200 PF00268 Ribonucleotide reductase, small chain CDIF29688_RS16205 PF08343 Ribonucleotide reductase N-terminal CDIF29688_RS16205 PF02867 Ribonucleotide reductase, barrel domain CDIF29688_RS16205 PF00317 Ribonucleotide reductase, all-alpha domain CDIF29688_RS16215 PF00005 ABC transporter CDIF29688_RS16220 PF01032 FecCD transport family CDIF29688_RS16235 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS16240 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS16240 PF00072 Response regulator receiver domain CDIF29688_RS16245 PF02687 FtsX-like permease family CDIF29688_RS16250 PF00005 ABC transporter CDIF29688_RS16265 PF00701 Dihydrodipicolinate synthetase family CDIF29688_RS16270 PF01557 Fumarylacetoacetate (FAA) hydrolase family CDIF29688_RS16275 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CDIF29688_RS16285 PF03812 2-keto-3-deoxygluconate permease CDIF29688_RS16295 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS16300 PF03734 L,D-transpeptidase catalytic domain CDIF29688_RS16310 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS16310 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CDIF29688_RS16315 PF02683 Cytochrome C biogenesis protein transmembrane region CDIF29688_RS16320 PF01638 HxlR-like helix-turn-helix CDIF29688_RS16325 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29688_RS16325 PF09261 Alpha mannosidase middle domain CDIF29688_RS16325 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29688_RS16335 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16340 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16340 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS16345 PF08279 HTH domain CDIF29688_RS16345 PF00874 PRD domain CDIF29688_RS16345 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS16345 PF05043 Mga helix-turn-helix domain CDIF29688_RS16350 PF06800 Sugar transport protein CDIF29688_RS16385 PF08331 Domain of unknown function (DUF1730) CDIF29688_RS16395 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16400 PF00571 CBS domain CDIF29688_RS16400 PF01380 SIS domain CDIF29688_RS16405 PF00155 Aminotransferase class I and II CDIF29688_RS16410 PF00367 phosphotransferase system, EIIB CDIF29688_RS16410 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16415 PF03123 CAT RNA binding domain CDIF29688_RS16415 PF00874 PRD domain CDIF29688_RS16420 PF00266 Aminotransferase class-V CDIF29688_RS16425 PF00085 Thioredoxin CDIF29688_RS16435 PF02567 Phenazine biosynthesis-like protein CDIF29688_RS16440 PF00854 POT family CDIF29688_RS16455 PF02861 Clp amino terminal domain, pathogenicity island component CDIF29688_RS16455 PF17871 AAA lid domain CDIF29688_RS16455 PF07724 AAA domain (Cdc48 subfamily) CDIF29688_RS16455 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS16455 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29688_RS16465 PF00561 alpha/beta hydrolase fold CDIF29688_RS16480 PF01418 Helix-turn-helix domain, rpiR family CDIF29688_RS16480 PF01380 SIS domain CDIF29688_RS16485 PF01869 BadF/BadG/BcrA/BcrD ATPase family CDIF29688_RS16490 PF13580 SIS domain CDIF29688_RS16500 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16515 PF03702 Anhydro-N-acetylmuramic acid kinase CDIF29688_RS16525 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS16530 PF00072 Response regulator receiver domain CDIF29688_RS16530 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS16540 PF00005 ABC transporter CDIF29688_RS16550 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16560 PF11975 Family 4 glycosyl hydrolase C-terminal domain CDIF29688_RS16560 PF02056 Family 4 glycosyl hydrolase CDIF29688_RS16565 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16565 PF00367 phosphotransferase system, EIIB CDIF29688_RS16580 PF01261 Xylose isomerase-like TIM barrel CDIF29688_RS16585 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CDIF29688_RS16585 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CDIF29688_RS16590 PF00480 ROK family CDIF29688_RS16600 PF03610 PTS system fructose IIA component CDIF29688_RS16600 PF03830 PTS system sorbose subfamily IIB component CDIF29688_RS16605 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29688_RS16610 PF03609 PTS system sorbose-specific iic component CDIF29688_RS16615 PF01055 Glycosyl hydrolases family 31 CDIF29688_RS16635 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CDIF29688_RS16635 PF04851 Type III restriction enzyme, res subunit CDIF29688_RS16635 PF08463 EcoEI R protein C-terminal CDIF29688_RS16635 PF00271 Helicase conserved C-terminal domain CDIF29688_RS16655 PF01420 Type I restriction modification DNA specificity domain CDIF29688_RS16660 PF02384 N-6 DNA Methylase CDIF29688_RS16665 PF01116 Fructose-bisphosphate aldolase class-II CDIF29688_RS16670 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16670 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16670 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS16675 PF00294 pfkB family carbohydrate kinase CDIF29688_RS16690 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS16700 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16705 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16710 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16710 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS16710 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16715 PF02595 Glycerate kinase family CDIF29688_RS16720 PF01074 Glycosyl hydrolases family 38 N-terminal domain CDIF29688_RS16720 PF09261 Alpha mannosidase middle domain CDIF29688_RS16720 PF07748 Glycosyl hydrolases family 38 C-terminal domain CDIF29688_RS16725 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS16725 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16725 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS16730 PF01380 SIS domain CDIF29688_RS16730 PF01418 Helix-turn-helix domain, rpiR family CDIF29688_RS16735 PF04794 YdjC-like protein CDIF29688_RS16740 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16740 PF00367 phosphotransferase system, EIIB CDIF29688_RS16740 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16745 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS16745 PF07702 UTRA domain CDIF29688_RS16750 PF00128 Alpha amylase, catalytic domain CDIF29688_RS16750 PF16657 Maltogenic Amylase, C-terminal domain CDIF29688_RS16755 PF13520 Amino acid permease CDIF29688_RS16760 PF07722 Peptidase C26 CDIF29688_RS16765 PF00158 Sigma-54 interaction domain CDIF29688_RS16765 PF13426 PAS domain CDIF29688_RS16765 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS16775 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS16780 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS16785 PF00367 phosphotransferase system, EIIB CDIF29688_RS16785 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16785 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16790 PF00874 PRD domain CDIF29688_RS16790 PF03123 CAT RNA binding domain CDIF29688_RS16800 PF03606 C4-dicarboxylate anaerobic carrier CDIF29688_RS16805 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16805 PF00367 phosphotransferase system, EIIB CDIF29688_RS16810 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS16815 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16825 PF00465 Iron-containing alcohol dehydrogenase CDIF29688_RS16830 PF00923 Transaldolase/Fructose-6-phosphate aldolase CDIF29688_RS16835 PF05043 Mga helix-turn-helix domain CDIF29688_RS16835 PF08279 HTH domain CDIF29688_RS16835 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS16835 PF00874 PRD domain CDIF29688_RS16840 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CDIF29688_RS16840 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CDIF29688_RS16845 PF00834 Ribulose-phosphate 3 epimerase family CDIF29688_RS16850 PF00365 Phosphofructokinase CDIF29688_RS16860 PF07687 Peptidase dimerisation domain CDIF29688_RS16860 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS16865 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS16875 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS16880 PF00367 phosphotransferase system, EIIB CDIF29688_RS16880 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16880 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16885 PF00874 PRD domain CDIF29688_RS16885 PF03123 CAT RNA binding domain CDIF29688_RS16905 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CDIF29688_RS16905 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS16910 PF07690 Major Facilitator Superfamily CDIF29688_RS16915 PF03551 Transcriptional regulator PadR-like family CDIF29688_RS16915 PF10400 Virulence activator alpha C-term CDIF29688_RS16925 PF01022 Bacterial regulatory protein, arsR family CDIF29688_RS16930 PF00881 Nitroreductase family CDIF29688_RS16935 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS16940 PF00367 phosphotransferase system, EIIB CDIF29688_RS16940 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS16940 PF02378 Phosphotransferase system, EIIC CDIF29688_RS16945 PF00874 PRD domain CDIF29688_RS16945 PF03123 CAT RNA binding domain CDIF29688_RS16955 PF00005 ABC transporter CDIF29688_RS16955 PF12704 MacB-like periplasmic core domain CDIF29688_RS16955 PF02687 FtsX-like permease family CDIF29688_RS16960 PF00664 ABC transporter transmembrane region CDIF29688_RS16960 PF00005 ABC transporter CDIF29688_RS16995 PF02195 ParB-like nuclease domain CDIF29688_RS16995 PF17762 HTH domain found in ParB protein CDIF29688_RS17000 PF00367 phosphotransferase system, EIIB CDIF29688_RS17000 PF02378 Phosphotransferase system, EIIC CDIF29688_RS17005 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS17010 PF03632 Glycosyl hydrolase family 65 central catalytic domain CDIF29688_RS17010 PF03633 Glycosyl hydrolase family 65, C-terminal domain CDIF29688_RS17010 PF03636 Glycosyl hydrolase family 65, N-terminal domain CDIF29688_RS17015 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS17020 PF12833 Helix-turn-helix domain CDIF29688_RS17025 PF02378 Phosphotransferase system, EIIC CDIF29688_RS17025 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS17025 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS17030 PF08279 HTH domain CDIF29688_RS17030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS17030 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS17030 PF00874 PRD domain CDIF29688_RS17030 PF05043 Mga helix-turn-helix domain CDIF29688_RS17035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CDIF29688_RS17035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS17040 PF01116 Fructose-bisphosphate aldolase class-II CDIF29688_RS17045 PF00232 Glycosyl hydrolase family 1 CDIF29688_RS17050 PF00367 phosphotransferase system, EIIB CDIF29688_RS17050 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CDIF29688_RS17050 PF02378 Phosphotransferase system, EIIC CDIF29688_RS17055 PF00874 PRD domain CDIF29688_RS17055 PF03123 CAT RNA binding domain CDIF29688_RS17080 PF01965 DJ-1/PfpI family CDIF29688_RS17095 PF04203 Sortase domain CDIF29688_RS17100 PF00145 C-5 cytosine-specific DNA methylase CDIF29688_RS17140 PF09856 Predicted transcriptional regulator (DUF2083) CDIF29688_RS17140 PF06114 IrrE N-terminal-like domain CDIF29688_RS17140 PF01381 Helix-turn-helix CDIF29688_RS17160 PF00589 Phage integrase family CDIF29688_RS17160 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29688_RS17185 PF01668 SmpB protein CDIF29688_RS17210 PF00005 ABC transporter CDIF29688_RS17210 PF13732 Domain of unknown function (DUF4162) CDIF29688_RS17220 PF17876 Cold shock domain CDIF29688_RS17220 PF00575 S1 RNA binding domain CDIF29688_RS17220 PF08206 Ribonuclease B OB domain CDIF29688_RS17220 PF00773 RNB domain CDIF29688_RS17235 PF01161 Phosphatidylethanolamine-binding protein CDIF29688_RS17265 PF00113 Enolase, C-terminal TIM barrel domain CDIF29688_RS17265 PF03952 Enolase, N-terminal domain CDIF29688_RS17270 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CDIF29688_RS17270 PF01676 Metalloenzyme superfamily CDIF29688_RS17275 PF00121 Triosephosphate isomerase CDIF29688_RS17280 PF00162 Phosphoglycerate kinase CDIF29688_RS17285 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CDIF29688_RS17285 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CDIF29688_RS17290 PF04198 Putative sugar-binding domain CDIF29688_RS17295 PF00309 Sigma-54 factor, Activator interacting domain (AID) CDIF29688_RS17295 PF04963 Sigma-54 factor, core binding domain CDIF29688_RS17295 PF04552 Sigma-54, DNA binding domain CDIF29688_RS17300 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CDIF29688_RS17300 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CDIF29688_RS17305 PF01979 Amidohydrolase family CDIF29688_RS17310 PF01180 Dihydroorotate dehydrogenase CDIF29688_RS17315 PF00860 Permease family CDIF29688_RS17320 PF01979 Amidohydrolase family CDIF29688_RS17325 PF07969 Amidohydrolase family CDIF29688_RS17330 PF07687 Peptidase dimerisation domain CDIF29688_RS17330 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS17335 PF00291 Pyridoxal-phosphate dependent enzyme CDIF29688_RS17345 PF00158 Sigma-54 interaction domain CDIF29688_RS17345 PF13188 PAS domain CDIF29688_RS17345 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS17350 PF01042 Endoribonuclease L-PSP CDIF29688_RS17365 PF02525 Flavodoxin-like fold CDIF29688_RS17370 PF13411 MerR HTH family regulatory protein CDIF29688_RS17380 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS17380 PF04122 Putative cell wall binding repeat 2 CDIF29688_RS17385 PF12146 Serine aminopeptidase, S33 CDIF29688_RS17395 PF00005 ABC transporter CDIF29688_RS17400 PF02687 FtsX-like permease family CDIF29688_RS17410 PF00196 Bacterial regulatory proteins, luxR family CDIF29688_RS17410 PF00072 Response regulator receiver domain CDIF29688_RS17420 PF12833 Helix-turn-helix domain CDIF29688_RS17425 PF00005 ABC transporter CDIF29688_RS17425 PF17755 UvrA DNA-binding domain CDIF29688_RS17425 PF17760 UvrA interaction domain CDIF29688_RS17435 PF13411 MerR HTH family regulatory protein CDIF29688_RS17440 PF07690 Major Facilitator Superfamily CDIF29688_RS17455 PF00005 ABC transporter CDIF29688_RS17460 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS17460 PF00672 HAMP domain CDIF29688_RS17460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS17465 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS17465 PF00072 Response regulator receiver domain CDIF29688_RS17470 PF02096 60Kd inner membrane protein CDIF29688_RS17480 PF00881 Nitroreductase family CDIF29688_RS17490 PF01554 MatE CDIF29688_RS17515 PF13649 Methyltransferase domain CDIF29688_RS17525 PF12833 Helix-turn-helix domain CDIF29688_RS17530 PF00005 ABC transporter CDIF29688_RS17530 PF00571 CBS domain CDIF29688_RS17535 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CDIF29688_RS17540 PF17755 UvrA DNA-binding domain CDIF29688_RS17540 PF17760 UvrA interaction domain CDIF29688_RS17540 PF00005 ABC transporter CDIF29688_RS17550 PF01430 Hsp33 protein CDIF29688_RS17555 PF13649 Methyltransferase domain CDIF29688_RS17565 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS17565 PF07687 Peptidase dimerisation domain CDIF29688_RS17570 PF03313 Serine dehydratase alpha chain CDIF29688_RS17570 PF03315 Serine dehydratase beta chain CDIF29688_RS17575 PF00701 Dihydrodipicolinate synthetase family CDIF29688_RS17580 PF02774 Semialdehyde dehydrogenase, dimerisation domain CDIF29688_RS17580 PF01118 Semialdehyde dehydrogenase, NAD binding domain CDIF29688_RS17585 PF00701 Dihydrodipicolinate synthetase family CDIF29688_RS17590 PF01113 Dihydrodipicolinate reductase, N-terminus CDIF29688_RS17590 PF05173 Dihydrodipicolinate reductase, C-terminus CDIF29688_RS17595 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29688_RS17595 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CDIF29688_RS17595 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29688_RS17605 PF05173 Dihydrodipicolinate reductase, C-terminus CDIF29688_RS17605 PF01113 Dihydrodipicolinate reductase, N-terminus CDIF29688_RS17615 PF00156 Phosphoribosyl transferase domain CDIF29688_RS17620 PF03313 Serine dehydratase alpha chain CDIF29688_RS17630 PF00158 Sigma-54 interaction domain CDIF29688_RS17630 PF13188 PAS domain CDIF29688_RS17630 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS17635 PF01209 ubiE/COQ5 methyltransferase family CDIF29688_RS17650 PF05544 Proline racemase CDIF29688_RS17660 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29688_RS17665 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29688_RS17680 PF09338 Glycine/sarcosine/betaine reductase component B subunits CDIF29688_RS17690 PF13426 PAS domain CDIF29688_RS17690 PF02954 Bacterial regulatory protein, Fis family CDIF29688_RS17690 PF00158 Sigma-54 interaction domain CDIF29688_RS17700 PF13237 4Fe-4S dicluster domain CDIF29688_RS17700 PF10531 SLBB domain CDIF29688_RS17700 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29688_RS17700 PF13375 RnfC Barrel sandwich hybrid domain CDIF29688_RS17710 PF01522 Polysaccharide deacetylase CDIF29688_RS17715 PF00269 Small, acid-soluble spore proteins, alpha/beta type CDIF29688_RS17735 PF08245 Mur ligase middle domain CDIF29688_RS17745 PF00072 Response regulator receiver domain CDIF29688_RS17745 PF04397 LytTr DNA-binding domain CDIF29688_RS17750 PF08264 Anticodon-binding domain of tRNA CDIF29688_RS17750 PF00133 tRNA synthetases class I (I, L, M and V) CDIF29688_RS17750 PF10458 Valyl tRNA synthetase tRNA binding arm CDIF29688_RS17760 PF01522 Polysaccharide deacetylase CDIF29688_RS17775 PF01895 PhoU domain CDIF29688_RS17780 PF00005 ABC transporter CDIF29688_RS17785 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS17790 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS17825 PF08460 Bacterial SH3 domain CDIF29688_RS17825 PF05257 CHAP domain CDIF29688_RS17825 PF01520 N-acetylmuramoyl-L-alanine amidase CDIF29688_RS17985 PF10668 Phage terminase small subunit CDIF29688_RS18005 PF10548 P22AR C-terminal domain CDIF29688_RS18005 PF08346 AntA/AntB antirepressor CDIF29688_RS18010 PF05866 Endodeoxyribonuclease RusA CDIF29688_RS18040 PF00145 C-5 cytosine-specific DNA methylase CDIF29688_RS18060 PF00436 Single-strand binding protein family CDIF29688_RS18110 PF01381 Helix-turn-helix CDIF29688_RS18125 PF14659 Phage integrase, N-terminal SAM-like domain CDIF29688_RS18125 PF00589 Phage integrase family CDIF29688_RS18130 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS18130 PF00072 Response regulator receiver domain CDIF29688_RS18135 PF00672 HAMP domain CDIF29688_RS18135 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS18135 PF18698 Histidine kinase sensor domain CDIF29688_RS18135 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS18140 PF00072 Response regulator receiver domain CDIF29688_RS18140 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS18145 PF12849 PBP superfamily domain CDIF29688_RS18150 PF01432 Peptidase family M3 CDIF29688_RS18150 PF08439 Oligopeptidase F CDIF29688_RS18155 PF02308 MgtC family CDIF29688_RS18175 PF07670 Nucleoside recognition CDIF29688_RS18175 PF02421 Ferrous iron transport protein B CDIF29688_RS18175 PF17910 FeoB cytosolic helical domain CDIF29688_RS18175 PF07664 Ferrous iron transport protein B C terminus CDIF29688_RS18180 PF13580 SIS domain CDIF29688_RS18185 PF03613 PTS system mannose/fructose/sorbose family IID component CDIF29688_RS18190 PF03609 PTS system sorbose-specific iic component CDIF29688_RS18195 PF03830 PTS system sorbose subfamily IIB component CDIF29688_RS18195 PF03610 PTS system fructose IIA component CDIF29688_RS18200 PF03610 PTS system fructose IIA component CDIF29688_RS18200 PF03830 PTS system sorbose subfamily IIB component CDIF29688_RS18205 PF00874 PRD domain CDIF29688_RS18205 PF00158 Sigma-54 interaction domain CDIF29688_RS18210 PF14748 Pyrroline-5-carboxylate reductase dimerisation CDIF29688_RS18210 PF03807 NADP oxidoreductase coenzyme F420-dependent CDIF29688_RS18215 PF01228 Glycine radical CDIF29688_RS18215 PF02901 Pyruvate formate lyase-like CDIF29688_RS18220 PF04055 Radical SAM superfamily CDIF29688_RS18225 PF13180 PDZ domain CDIF29688_RS18230 PF00342 Phosphoglucose isomerase CDIF29688_RS18235 PF02690 Na+/Pi-cotransporter CDIF29688_RS18255 PF02810 SEC-C motif CDIF29688_RS18255 PF05225 helix-turn-helix, Psq domain CDIF29688_RS18275 PF07963 Prokaryotic N-terminal methylation motif CDIF29688_RS18275 PF00114 Pilin (bacterial filament) CDIF29688_RS18280 PF00482 Type II secretion system (T2SS), protein F CDIF29688_RS18285 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDIF29688_RS18285 PF00437 Type II/IV secretion system protein CDIF29688_RS18300 PF07690 Major Facilitator Superfamily CDIF29688_RS18305 PF01926 50S ribosome-binding GTPase CDIF29688_RS18310 PF02190 ATP-dependent protease La (LON) substrate-binding domain CDIF29688_RS18310 PF05362 Lon protease (S16) C-terminal proteolytic domain CDIF29688_RS18310 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS18320 PF02417 Chromate transporter CDIF29688_RS18325 PF06689 ClpX C4-type zinc finger CDIF29688_RS18325 PF10431 C-terminal, D2-small domain, of ClpB protein CDIF29688_RS18325 PF07724 AAA domain (Cdc48 subfamily) CDIF29688_RS18330 PF00574 Clp protease CDIF29688_RS18335 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CDIF29688_RS18335 PF05697 Bacterial trigger factor protein (TF) CDIF29688_RS18335 PF05698 Bacterial trigger factor protein (TF) C-terminus CDIF29688_RS18345 PF03725 3' exoribonuclease family, domain 2 CDIF29688_RS18345 PF01138 3' exoribonuclease family, domain 1 CDIF29688_RS18350 PF01653 NAD-dependent DNA ligase adenylation domain CDIF29688_RS18350 PF03120 NAD-dependent DNA ligase OB-fold domain CDIF29688_RS18350 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CDIF29688_RS18350 PF12826 Helix-hairpin-helix motif CDIF29688_RS18350 PF00533 BRCA1 C Terminus (BRCT) domain CDIF29688_RS18370 PF07992 Pyridine nucleotide-disulphide oxidoreductase CDIF29688_RS18370 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CDIF29688_RS18370 PF13247 4Fe-4S dicluster domain CDIF29688_RS18375 PF00037 4Fe-4S binding domain CDIF29688_RS18375 PF02256 Iron hydrogenase small subunit CDIF29688_RS18375 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDIF29688_RS18375 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29688_RS18380 PF12800 4Fe-4S binding domain CDIF29688_RS18380 PF13247 4Fe-4S dicluster domain CDIF29688_RS18390 PF02634 FdhD/NarQ family CDIF29688_RS18405 PF00072 Response regulator receiver domain CDIF29688_RS18405 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS18425 PF13732 Domain of unknown function (DUF4162) CDIF29688_RS18425 PF00005 ABC transporter CDIF29688_RS18450 PF04397 LytTr DNA-binding domain CDIF29688_RS18450 PF00072 Response regulator receiver domain CDIF29688_RS18480 PF00535 Glycosyl transferase family 2 CDIF29688_RS18480 PF13181 Tetratricopeptide repeat CDIF29688_RS18485 PF00574 Clp protease CDIF29688_RS18490 PF12833 Helix-turn-helix domain CDIF29688_RS18495 PF00155 Aminotransferase class I and II CDIF29688_RS18495 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS18505 PF00881 Nitroreductase family CDIF29688_RS18510 PF01638 HxlR-like helix-turn-helix CDIF29688_RS18515 PF01965 DJ-1/PfpI family CDIF29688_RS18520 PF01037 Lrp/AsnC ligand binding domain CDIF29688_RS18525 PF12848 ABC transporter CDIF29688_RS18525 PF00005 ABC transporter CDIF29688_RS18530 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS18530 PF00072 Response regulator receiver domain CDIF29688_RS18550 PF00005 ABC transporter CDIF29688_RS18555 PF00563 EAL domain CDIF29688_RS18555 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS18555 PF13426 PAS domain CDIF29688_RS18570 PF03193 RsgA GTPase CDIF29688_RS18595 PF01938 TRAM domain CDIF29688_RS18595 PF05958 tRNA (Uracil-5-)-methyltransferase CDIF29688_RS18600 PF02887 Pyruvate kinase, alpha/beta domain CDIF29688_RS18600 PF00224 Pyruvate kinase, barrel domain CDIF29688_RS18600 PF00391 PEP-utilising enzyme, mobile domain CDIF29688_RS18605 PF00365 Phosphofructokinase CDIF29688_RS18610 PF01336 OB-fold nucleic acid binding domain CDIF29688_RS18610 PF02811 PHP domain CDIF29688_RS18610 PF14579 Helix-hairpin-helix motif CDIF29688_RS18610 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CDIF29688_RS18610 PF07733 Bacterial DNA polymerase III alpha NTPase domain CDIF29688_RS18615 PF10298 WhiA N-terminal LAGLIDADG-like domain CDIF29688_RS18615 PF14527 WhiA LAGLIDADG-like domain CDIF29688_RS18615 PF02650 WhiA C-terminal HTH domain CDIF29688_RS18620 PF00293 NUDIX domain CDIF29688_RS18625 PF01933 Uncharacterised protein family UPF0052 CDIF29688_RS18630 PF03668 P-loop ATPase protein family CDIF29688_RS18635 PF02811 PHP domain CDIF29688_RS18640 PF01565 FAD binding domain CDIF29688_RS18640 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CDIF29688_RS18645 PF01226 Formate/nitrite transporter CDIF29688_RS18650 PF13396 Phospholipase_D-nuclease N-terminal CDIF29688_RS18650 PF13091 PLD-like domain CDIF29688_RS18660 PF00037 4Fe-4S binding domain CDIF29688_RS18660 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CDIF29688_RS18660 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CDIF29688_RS18665 PF00037 4Fe-4S binding domain CDIF29688_RS18665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CDIF29688_RS18665 PF02906 Iron only hydrogenase large subunit, C-terminal domain CDIF29688_RS18665 PF02256 Iron hydrogenase small subunit CDIF29688_RS18670 PF01624 MutS domain I CDIF29688_RS18670 PF05188 MutS domain II CDIF29688_RS18670 PF05192 MutS domain III CDIF29688_RS18670 PF05190 MutS family domain IV CDIF29688_RS18670 PF00488 MutS domain V CDIF29688_RS18675 PF07475 HPr Serine kinase C-terminal domain CDIF29688_RS18675 PF02603 HPr Serine kinase N terminus CDIF29688_RS18680 PF12826 Helix-hairpin-helix motif CDIF29688_RS18680 PF02151 UvrB/uvrC motif CDIF29688_RS18680 PF08459 UvrC Helix-hairpin-helix N-terminal CDIF29688_RS18680 PF01541 GIY-YIG catalytic domain CDIF29688_RS18685 PF17755 UvrA DNA-binding domain CDIF29688_RS18685 PF17760 UvrA interaction domain CDIF29688_RS18690 PF00271 Helicase conserved C-terminal domain CDIF29688_RS18690 PF02151 UvrB/uvrC motif CDIF29688_RS18690 PF12344 Ultra-violet resistance protein B CDIF29688_RS18690 PF17757 UvrB interaction domain CDIF29688_RS18690 PF04851 Type III restriction enzyme, res subunit CDIF29688_RS18700 PF13416 Bacterial extracellular solute-binding protein CDIF29688_RS18705 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS18710 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS18715 PF17912 MalK OB fold domain CDIF29688_RS18715 PF00005 ABC transporter CDIF29688_RS18715 PF03459 TOBE domain CDIF29688_RS18735 PF10414 Sirohaem synthase dimerisation region CDIF29688_RS18735 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS18735 PF14824 Sirohaem biosynthesis protein central CDIF29688_RS18740 PF00490 Delta-aminolevulinic acid dehydratase CDIF29688_RS18745 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS18745 PF02602 Uroporphyrinogen-III synthase HemD CDIF29688_RS18750 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CDIF29688_RS18750 PF03900 Porphobilinogen deaminase, C-terminal domain CDIF29688_RS18755 PF06180 Cobalt chelatase (CbiK) CDIF29688_RS18760 PF02571 Precorrin-6x reductase CbiJ/CobK CDIF29688_RS18765 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS18770 PF11760 Cobalamin synthesis G N-terminal CDIF29688_RS18770 PF11761 Cobalamin biosynthesis central region CDIF29688_RS18770 PF01890 Cobalamin synthesis G C-terminus CDIF29688_RS18775 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS18780 PF05175 Methyltransferase small domain CDIF29688_RS18785 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS18790 PF01888 CbiD CDIF29688_RS18795 PF02570 Precorrin-8X methylmutase CDIF29688_RS18800 PF00288 GHMP kinases N terminal domain CDIF29688_RS18805 PF00155 Aminotransferase class I and II CDIF29688_RS18810 PF03186 CobD/Cbib protein CDIF29688_RS18815 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CDIF29688_RS18815 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDIF29688_RS18820 PF07685 CobB/CobQ-like glutamine amidotransferase domain CDIF29688_RS18830 PF02654 Cobalamin-5-phosphate synthase CDIF29688_RS18835 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CDIF29688_RS18840 PF02277 Phosphoribosyltransferase CDIF29688_RS18860 PF00155 Aminotransferase class I and II CDIF29688_RS18865 PF01321 Creatinase/Prolidase N-terminal domain CDIF29688_RS18865 PF00557 Metallopeptidase family M24 CDIF29688_RS18870 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS18870 PF02378 Phosphotransferase system, EIIC CDIF29688_RS18875 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS18880 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29688_RS18885 PF05343 M42 glutamyl aminopeptidase CDIF29688_RS18890 PF03123 CAT RNA binding domain CDIF29688_RS18890 PF00874 PRD domain CDIF29688_RS18895 PF01116 Fructose-bisphosphate aldolase class-II CDIF29688_RS18900 PF01380 SIS domain CDIF29688_RS18905 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CDIF29688_RS18910 PF00294 pfkB family carbohydrate kinase CDIF29688_RS18915 PF07702 UTRA domain CDIF29688_RS18915 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS18920 PF01979 Amidohydrolase family CDIF29688_RS18935 PF17820 PDZ domain CDIF29688_RS18935 PF03572 Peptidase family S41 CDIF29688_RS18935 PF01471 Putative peptidoglycan binding domain CDIF29688_RS18940 PF01812 5-formyltetrahydrofolate cyclo-ligase family CDIF29688_RS18955 PF02779 Transketolase, pyrimidine binding domain CDIF29688_RS18955 PF02780 Transketolase, C-terminal domain CDIF29688_RS18960 PF00456 Transketolase, thiamine diphosphate binding domain CDIF29688_RS18965 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CDIF29688_RS18975 PF00842 Alanine racemase, C-terminal domain CDIF29688_RS18975 PF01168 Alanine racemase, N-terminal domain CDIF29688_RS18985 PF00478 IMP dehydrogenase / GMP reductase domain CDIF29688_RS18985 PF00571 CBS domain CDIF29688_RS18990 PF01648 4'-phosphopantetheinyl transferase superfamily CDIF29688_RS18995 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CDIF29688_RS18995 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CDIF29688_RS19000 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29688_RS19000 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29688_RS19005 PF00231 ATP synthase CDIF29688_RS19010 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29688_RS19010 PF00306 ATP synthase alpha/beta chain, C terminal domain CDIF29688_RS19010 PF02874 ATP synthase alpha/beta family, beta-barrel domain CDIF29688_RS19015 PF00213 ATP synthase delta (OSCP) subunit CDIF29688_RS19020 PF00430 ATP synthase B/B' CF(0) CDIF29688_RS19025 PF00137 ATP synthase subunit C CDIF29688_RS19030 PF00119 ATP synthase A chain CDIF29688_RS19055 PF02625 XdhC and CoxI family CDIF29688_RS19055 PF13478 XdhC Rossmann domain CDIF29688_RS19065 PF02502 Ribose/Galactose Isomerase CDIF29688_RS19070 PF01451 Low molecular weight phosphotyrosine protein phosphatase CDIF29688_RS19075 PF03481 Putative GTP-binding controlling metal-binding CDIF29688_RS19075 PF01300 Telomere recombination CDIF29688_RS19085 PF03462 PCRF domain CDIF29688_RS19085 PF00472 RF-1 domain CDIF29688_RS19090 PF05175 Methyltransferase small domain CDIF29688_RS19090 PF17827 PrmC N-terminal domain CDIF29688_RS19095 PF07136 Protein of unknown function (DUF1385) CDIF29688_RS19100 PF01197 Ribosomal protein L31 CDIF29688_RS19105 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CDIF29688_RS19105 PF07498 Rho termination factor, N-terminal domain CDIF29688_RS19105 PF07497 Rho termination factor, RNA-binding domain CDIF29688_RS19110 PF00483 Nucleotidyl transferase CDIF29688_RS19115 PF08439 Oligopeptidase F CDIF29688_RS19115 PF01432 Peptidase family M3 CDIF29688_RS19120 PF07228 Stage II sporulation protein E (SpoIIE) CDIF29688_RS19125 PF02541 Ppx/GppA phosphatase family CDIF29688_RS19145 PF01479 S4 domain CDIF29688_RS19150 PF00216 Bacterial DNA-binding protein CDIF29688_RS19155 PF03819 MazG nucleotide pyrophosphohydrolase domain CDIF29688_RS19155 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS19160 PF01943 Polysaccharide biosynthesis protein CDIF29688_RS19160 PF14667 Polysaccharide biosynthesis C-terminal domain CDIF29688_RS19165 PF15714 Stage V sporulation protein T C-terminal, transcription factor CDIF29688_RS19165 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CDIF29688_RS19170 PF05698 Bacterial trigger factor protein (TF) C-terminus CDIF29688_RS19175 PF17757 UvrB interaction domain CDIF29688_RS19175 PF02559 CarD-like/TRCF domain CDIF29688_RS19175 PF03461 TRCF domain CDIF29688_RS19175 PF00270 DEAD/DEAH box helicase CDIF29688_RS19175 PF00271 Helicase conserved C-terminal domain CDIF29688_RS19180 PF01195 Peptidyl-tRNA hydrolase CDIF29688_RS19190 PF01478 Type IV leader peptidase family CDIF29688_RS19190 PF06750 Bacterial Peptidase A24 N-terminal domain CDIF29688_RS19195 PF00437 Type II/IV secretion system protein CDIF29688_RS19225 PF00482 Type II secretion system (T2SS), protein F CDIF29688_RS19230 PF00437 Type II/IV secretion system protein CDIF29688_RS19230 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CDIF29688_RS19240 PF14572 Phosphoribosyl synthetase-associated domain CDIF29688_RS19240 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CDIF29688_RS19245 PF14602 Hexapeptide repeat of succinyl-transferase CDIF29688_RS19245 PF00483 Nucleotidyl transferase CDIF29688_RS19245 PF00132 Bacterial transferase hexapeptide (six repeats) CDIF29688_RS19250 PF04026 SpoVG CDIF29688_RS19255 PF09182 Bacterial purine repressor, N-terminal CDIF29688_RS19255 PF00156 Phosphoribosyl transferase domain CDIF29688_RS19260 PF01225 Mur ligase family, catalytic domain CDIF29688_RS19260 PF08245 Mur ligase middle domain CDIF29688_RS19260 PF02875 Mur ligase family, glutamate ligase domain CDIF29688_RS19270 PF01545 Cation efflux family CDIF29688_RS19270 PF16916 Dimerisation domain of Zinc Transporter CDIF29688_RS19275 PF01546 Peptidase family M20/M25/M40 CDIF29688_RS19275 PF07687 Peptidase dimerisation domain CDIF29688_RS19285 PF00398 Ribosomal RNA adenine dimethylase CDIF29688_RS19290 PF01751 Toprim domain CDIF29688_RS19290 PF13331 Domain of unknown function (DUF4093) CDIF29688_RS19310 PF00528 Binding-protein-dependent transport system inner membrane component CDIF29688_RS19315 PF00005 ABC transporter CDIF29688_RS19320 PF02811 PHP domain CDIF29688_RS19325 PF07969 Amidohydrolase family CDIF29688_RS19330 PF00005 ABC transporter CDIF29688_RS19335 PF00005 ABC transporter CDIF29688_RS19340 PF06007 Phosphonate metabolism protein PhnJ CDIF29688_RS19345 PF05861 Bacterial phosphonate metabolism protein (PhnI) CDIF29688_RS19360 PF01026 TatD related DNase CDIF29688_RS19365 PF08264 Anticodon-binding domain of tRNA CDIF29688_RS19365 PF01588 Putative tRNA binding domain CDIF29688_RS19365 PF09334 tRNA synthetases class I (M) CDIF29688_RS19370 PF07670 Nucleoside recognition CDIF29688_RS19380 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CDIF29688_RS19380 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CDIF29688_RS19380 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CDIF29688_RS19385 PF01037 Lrp/AsnC ligand binding domain CDIF29688_RS19390 PF01743 Poly A polymerase head domain CDIF29688_RS19390 PF12627 Probable RNA and SrmB- binding site of polymerase A CDIF29688_RS19390 PF01966 HD domain CDIF29688_RS19395 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CDIF29688_RS19400 PF05175 Methyltransferase small domain CDIF29688_RS19405 PF04468 PSP1 C-terminal conserved region CDIF29688_RS19410 PF09115 DNA polymerase III, delta subunit, C terminal CDIF29688_RS19415 PF02223 Thymidylate kinase CDIF29688_RS19420 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CDIF29688_RS19420 PF01276 Orn/Lys/Arg decarboxylase, major domain CDIF29688_RS19425 PF04070 Domain of unknown function (DUF378) CDIF29688_RS19450 PF01336 OB-fold nucleic acid binding domain CDIF29688_RS19450 PF00152 tRNA synthetases class II (D, K and N) CDIF29688_RS19455 PF01272 Transcription elongation factor, GreA/GreB, C-term CDIF29688_RS19455 PF03449 Transcription elongation factor, N-terminal CDIF29688_RS19460 PF01207 Dihydrouridine synthase (Dus) CDIF29688_RS19465 PF03309 Type III pantothenate kinase CDIF29688_RS19475 PF03576 Peptidase family S58 CDIF29688_RS19480 PF03099 Biotin/lipoate A/B protein ligase family CDIF29688_RS19480 PF08279 HTH domain CDIF29688_RS19480 PF02237 Biotin protein ligase C terminal domain CDIF29688_RS19485 PF00004 ATPase family associated with various cellular activities (AAA) CDIF29688_RS19485 PF17862 AAA+ lid domain CDIF29688_RS19485 PF01434 Peptidase family M41 CDIF29688_RS19490 PF01171 PP-loop family CDIF29688_RS19490 PF11734 TilS substrate C-terminal domain CDIF29688_RS19500 PF01177 Asp/Glu/Hydantoin racemase CDIF29688_RS19505 PF01471 Putative peptidoglycan binding domain CDIF29688_RS19505 PF07486 Cell Wall Hydrolase CDIF29688_RS19510 PF09551 Stage II sporulation protein R (spore_II_R) CDIF29688_RS19515 PF07729 FCD domain CDIF29688_RS19515 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS19520 PF08544 GHMP kinases C terminal CDIF29688_RS19520 PF00288 GHMP kinases N terminal domain CDIF29688_RS19535 PF05582 YabG peptidase U57 CDIF29688_RS19550 PF07517 SecA DEAD-like domain CDIF29688_RS19550 PF02810 SEC-C motif CDIF29688_RS19550 PF01043 SecA preprotein cross-linking domain CDIF29688_RS19550 PF07516 SecA Wing and Scaffold domain CDIF29688_RS19575 PF07690 Major Facilitator Superfamily CDIF29688_RS19580 PF01053 Cys/Met metabolism PLP-dependent enzyme CDIF29688_RS19585 PF02796 Helix-turn-helix domain of resolvase CDIF29688_RS19585 PF00239 Resolvase, N terminal domain CDIF29688_RS19600 PF10672 S-adenosylmethionine-dependent methyltransferase CDIF29688_RS19605 PF01479 S4 domain CDIF29688_RS19605 PF00849 RNA pseudouridylate synthase CDIF29688_RS19610 PF06445 GyrI-like small molecule binding domain CDIF29688_RS19610 PF13411 MerR HTH family regulatory protein CDIF29688_RS19620 PF12704 MacB-like periplasmic core domain CDIF29688_RS19620 PF02687 FtsX-like permease family CDIF29688_RS19620 PF00005 ABC transporter CDIF29688_RS19625 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS19625 PF18698 Histidine kinase sensor domain CDIF29688_RS19625 PF00672 HAMP domain CDIF29688_RS19625 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS19625 PF00989 PAS fold CDIF29688_RS19630 PF00072 Response regulator receiver domain CDIF29688_RS19630 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS19635 PF02142 MGS-like domain CDIF29688_RS19635 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29688_RS19635 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDIF29688_RS19640 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDIF29688_RS19640 PF00117 Glutamine amidotransferase class-I CDIF29688_RS19645 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CDIF29688_RS19645 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CDIF29688_RS19645 PF02142 MGS-like domain CDIF29688_RS19650 PF00117 Glutamine amidotransferase class-I CDIF29688_RS19650 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CDIF29688_RS19655 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CDIF29688_RS19670 PF02073 Thermophilic metalloprotease (M29) CDIF29688_RS19675 PF02607 B12 binding domain CDIF29688_RS19675 PF02574 Homocysteine S-methyltransferase CDIF29688_RS19675 PF02310 B12 binding domain CDIF29688_RS19675 PF00809 Pterin binding enzyme CDIF29688_RS19675 PF02965 Vitamin B12 dependent methionine synthase, activation domain CDIF29688_RS19685 PF02664 S-Ribosylhomocysteinase (LuxS) CDIF29688_RS19690 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CDIF29688_RS19690 PF00512 His Kinase A (phospho-acceptor) domain CDIF29688_RS19695 PF00486 Transcriptional regulatory protein, C terminal CDIF29688_RS19695 PF00072 Response regulator receiver domain CDIF29688_RS19700 PF02557 D-alanyl-D-alanine carboxypeptidase CDIF29688_RS19705 PF01171 PP-loop family CDIF29688_RS19710 PF00149 Calcineurin-like phosphoesterase CDIF29688_RS19710 PF10518 TAT (twin-arginine translocation) pathway signal sequence CDIF29688_RS19715 PF01370 NAD dependent epimerase/dehydratase family CDIF29688_RS19720 PF13419 Haloacid dehalogenase-like hydrolase CDIF29688_RS19730 PF01979 Amidohydrolase family CDIF29688_RS19740 PF00005 ABC transporter CDIF29688_RS19740 PF12857 TOBE-like domain CDIF29688_RS19750 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CDIF29688_RS19755 PF01554 MatE CDIF29688_RS19770 PF06445 GyrI-like small molecule binding domain CDIF29688_RS19770 PF13411 MerR HTH family regulatory protein CDIF29688_RS19775 PF00999 Sodium/hydrogen exchanger family CDIF29688_RS19775 PF03471 Transporter associated domain CDIF29688_RS19775 PF02080 TrkA-C domain CDIF29688_RS19790 PF13302 Acetyltransferase (GNAT) domain CDIF29688_RS19790 PF03352 Methyladenine glycosylase CDIF29688_RS19790 PF13673 Acetyltransferase (GNAT) domain CDIF29688_RS19790 PF00117 Glutamine amidotransferase class-I CDIF29688_RS19790 PF00958 GMP synthase C terminal domain CDIF29688_RS19800 PF00805 Pentapeptide repeats (8 copies) CDIF29688_RS19805 PF03831 PhnA domain CDIF29688_RS19805 PF08274 PhnA Zinc-Ribbon CDIF29688_RS19810 PF00005 ABC transporter CDIF29688_RS19810 PF02687 FtsX-like permease family CDIF29688_RS19810 PF12704 MacB-like periplasmic core domain CDIF29688_RS19820 PF13426 PAS domain CDIF29688_RS19820 PF08447 PAS fold CDIF29688_RS19820 PF05231 MASE1 CDIF29688_RS19820 PF08448 PAS fold CDIF29688_RS19820 PF00990 Diguanylate cyclase, GGDEF domain CDIF29688_RS19820 PF00563 EAL domain CDIF29688_RS19825 PF02581 Thiamine monophosphate synthase CDIF29688_RS19830 PF00701 Dihydrodipicolinate synthetase family CDIF29688_RS19835 PF01380 SIS domain CDIF29688_RS19835 PF00571 CBS domain CDIF29688_RS19845 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS19855 PF00857 Isochorismatase family CDIF29688_RS19865 PF13411 MerR HTH family regulatory protein CDIF29688_RS19895 PF03466 LysR substrate binding domain CDIF29688_RS19895 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CDIF29688_RS19900 PF00294 pfkB family carbohydrate kinase CDIF29688_RS19905 PF07071 KDGP aldolase CDIF29688_RS19910 PF03841 L-seryl-tRNA selenium transferase CDIF29688_RS19915 PF01979 Amidohydrolase family CDIF29688_RS19925 PF02378 Phosphotransferase system, EIIC CDIF29688_RS19930 PF07702 UTRA domain CDIF29688_RS19930 PF00392 Bacterial regulatory proteins, gntR family CDIF29688_RS19935 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CDIF29688_RS19940 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CDIF29688_RS19950 PF07508 Recombinase CDIF29688_RS19950 PF00239 Resolvase, N terminal domain CDIF29688_RS20005 PF02086 D12 class N6 adenine-specific DNA methyltransferase CDIF29688_RS20020 PF02590 Predicted SPOUT methyltransferase CDIF29688_RS20025 PF02378 Phosphotransferase system, EIIC CDIF29688_RS20030 PF00753 Metallo-beta-lactamase superfamily CDIF29688_RS20045 PF01695 IstB-like ATP binding protein CDIF29688_RS20070 PF00709 Adenylosuccinate synthetase CDIF29688_RS20080 PF00772 DnaB-like helicase N terminal domain CDIF29688_RS20080 PF03796 DnaB-like helicase C terminal domain CDIF29688_RS20085 PF03948 Ribosomal protein L9, C-terminal domain CDIF29688_RS20085 PF01281 Ribosomal protein L9, N-terminal domain CDIF29688_RS20090 PF02272 DHHA1 domain CDIF29688_RS20090 PF01368 DHH family CDIF29688_RS20105 PF01084 Ribosomal protein S18 CDIF29688_RS20110 PF00436 Single-strand binding protein family CDIF29688_RS20115 PF01250 Ribosomal protein S6 CDIF29688_RS20120 PF00155 Aminotransferase class I and II CDIF29688_RS20135 PF01206 Sulfurtransferase TusA CDIF29688_RS20150 PF00266 Aminotransferase class-V CDIF29688_RS20155 PF02195 ParB-like nuclease domain CDIF29688_RS20155 PF17762 HTH domain found in ParB protein CDIF29688_RS20160 PF13614 AAA domain CDIF29688_RS20165 PF02195 ParB-like nuclease domain CDIF29688_RS20165 PF17762 HTH domain found in ParB protein CDIF29688_RS20170 PF02527 rRNA small subunit methyltransferase G CDIF29688_RS20175 PF01134 Glucose inhibited division protein A CDIF29688_RS20175 PF13932 GidA associated domain CDIF29688_RS20180 PF01926 50S ribosome-binding GTPase CDIF29688_RS20180 PF12631 MnmE helical domain CDIF29688_RS20180 PF10396 GTP-binding protein TrmE N-terminus CDIF29688_RS20185 PF01424 R3H domain CDIF29688_RS20185 PF14804 Jag N-terminus CDIF29688_RS20190 PF02096 60Kd inner membrane protein CDIF29688_RS20195 PF01809 Putative membrane protein insertion efficiency factor CDIF29688_RS20200 PF00825 Ribonuclease P CDIF29688_RS20205 PF00468 Ribosomal protein L34