locus-tag class description CWR56_RS00010 PF00471 Ribosomal protein L33 CWR56_RS00020 PF02357 Transcription termination factor nusG CWR56_RS00020 PF00467 KOW motif CWR56_RS00025 PF00298 Ribosomal protein L11, RNA binding domain CWR56_RS00025 PF03946 Ribosomal protein L11, N-terminal domain CWR56_RS00030 PF00687 Ribosomal protein L1p/L10e family CWR56_RS00035 PF00466 Ribosomal protein L10 CWR56_RS00040 PF00542 Ribosomal protein L7/L12 C-terminal domain CWR56_RS00040 PF16320 Ribosomal protein L7/L12 dimerisation domain CWR56_RS00050 PF04561 RNA polymerase Rpb2, domain 2 CWR56_RS00050 PF04565 RNA polymerase Rpb2, domain 3 CWR56_RS00050 PF10385 RNA polymerase beta subunit external 1 domain CWR56_RS00050 PF00562 RNA polymerase Rpb2, domain 6 CWR56_RS00050 PF04560 RNA polymerase Rpb2, domain 7 CWR56_RS00050 PF04563 RNA polymerase beta subunit CWR56_RS00055 PF04998 RNA polymerase Rpb1, domain 5 CWR56_RS00055 PF04983 RNA polymerase Rpb1, domain 3 CWR56_RS00055 PF04997 RNA polymerase Rpb1, domain 1 CWR56_RS00055 PF00623 RNA polymerase Rpb1, domain 2 CWR56_RS00055 PF05000 RNA polymerase Rpb1, domain 4 CWR56_RS00060 PF00164 Ribosomal protein S12/S23 CWR56_RS00065 PF00177 Ribosomal protein S7p/S5e CWR56_RS00070 PF14492 Elongation Factor G, domain II CWR56_RS00070 PF03144 Elongation factor Tu domain 2 CWR56_RS00070 PF00009 Elongation factor Tu GTP binding domain CWR56_RS00070 PF00679 Elongation factor G C-terminus CWR56_RS00070 PF03764 Elongation factor G, domain IV CWR56_RS00075 PF03143 Elongation factor Tu C-terminal domain CWR56_RS00075 PF03144 Elongation factor Tu domain 2 CWR56_RS00075 PF00009 Elongation factor Tu GTP binding domain CWR56_RS00080 PF00338 Ribosomal protein S10p/S20e CWR56_RS00085 PF00297 Ribosomal protein L3 CWR56_RS00090 PF00573 Ribosomal protein L4/L1 family CWR56_RS00095 PF00276 Ribosomal protein L23 CWR56_RS00100 PF00181 Ribosomal Proteins L2, RNA binding domain CWR56_RS00100 PF03947 Ribosomal Proteins L2, C-terminal domain CWR56_RS00105 PF00203 Ribosomal protein S19 CWR56_RS00110 PF00237 Ribosomal protein L22p/L17e CWR56_RS00115 PF07650 KH domain CWR56_RS00115 PF00189 Ribosomal protein S3, C-terminal domain CWR56_RS00120 PF00252 Ribosomal protein L16p/L10e CWR56_RS00125 PF00831 Ribosomal L29 protein CWR56_RS00130 PF00366 Ribosomal protein S17 CWR56_RS00135 PF00238 Ribosomal protein L14p/L23e CWR56_RS00140 PF00467 KOW motif CWR56_RS00140 PF17136 Ribosomal proteins 50S L24/mitochondrial 39S L24 CWR56_RS00145 PF00281 Ribosomal protein L5 CWR56_RS00145 PF00673 ribosomal L5P family C-terminus CWR56_RS00150 PF00253 Ribosomal protein S14p/S29e CWR56_RS00155 PF00410 Ribosomal protein S8 CWR56_RS00160 PF00347 Ribosomal protein L6 CWR56_RS00165 PF00861 Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast CWR56_RS00170 PF03719 Ribosomal protein S5, C-terminal domain CWR56_RS00170 PF00333 Ribosomal protein S5, N-terminal domain CWR56_RS00175 PF00327 Ribosomal protein L30p/L7e CWR56_RS00180 PF00828 Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A CWR56_RS00185 PF00344 SecY translocase CWR56_RS00190 PF05191 Adenylate kinase, active site lid CWR56_RS00195 PF00557 Metallopeptidase family M24 CWR56_RS00205 PF01176 Translation initiation factor 1A / IF-1 CWR56_RS00210 PF00444 Ribosomal protein L36 CWR56_RS00215 PF00416 Ribosomal protein S13/S18 CWR56_RS00220 PF00411 Ribosomal protein S11 CWR56_RS00225 PF01479 S4 domain CWR56_RS00225 PF00163 Ribosomal protein S4/S9 N-terminal domain CWR56_RS00230 PF01000 RNA polymerase Rpb3/RpoA insert domain CWR56_RS00230 PF03118 Bacterial RNA polymerase, alpha chain C terminal domain CWR56_RS00230 PF01193 RNA polymerase Rpb3/Rpb11 dimerisation domain CWR56_RS00235 PF01196 Ribosomal protein L17 CWR56_RS00240 PF00005 ABC transporter CWR56_RS00245 PF00005 ABC transporter CWR56_RS00250 PF02361 Cobalt transport protein CWR56_RS00255 PF01416 tRNA pseudouridine synthase CWR56_RS00260 PF00572 Ribosomal protein L13 CWR56_RS00265 PF00380 Ribosomal protein S9/S16 CWR56_RS00270 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS00405 PF00155 Aminotransferase class I and II CWR56_RS00410 PF13597 Anaerobic ribonucleoside-triphosphate reductase CWR56_RS00410 PF03477 ATP cone domain CWR56_RS00415 PF04055 Radical SAM superfamily CWR56_RS00515 PF02457 DisA bacterial checkpoint controller nucleotide-binding CWR56_RS00530 PF01515 Phosphate acetyl/butaryl transferase CWR56_RS00535 PF00871 Acetokinase family CWR56_RS00565 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CWR56_RS00565 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CWR56_RS00565 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CWR56_RS00565 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CWR56_RS00570 PF01380 SIS domain CWR56_RS00575 PF00581 Rhodanese-like domain CWR56_RS00585 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CWR56_RS00590 PF08486 Stage II sporulation protein CWR56_RS00600 PF12116 Stage III sporulation protein D CWR56_RS00610 PF07977 FabA-like domain CWR56_RS00615 PF06866 Protein of unknown function (DUF1256) CWR56_RS00620 PF02772 S-adenosylmethionine synthetase, central domain CWR56_RS00620 PF02773 S-adenosylmethionine synthetase, C-terminal domain CWR56_RS00620 PF00438 S-adenosylmethionine synthetase, N-terminal domain CWR56_RS00630 PF18335 ATP-dependent RecD-like DNA helicase SH3 domain CWR56_RS00630 PF14490 Helix-hairpin-helix containing domain CWR56_RS00630 PF13538 UvrD-like helicase C-terminal domain CWR56_RS00640 PF08279 HTH domain CWR56_RS00640 PF00874 PRD domain CWR56_RS00640 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS00640 PF05043 Mga helix-turn-helix domain CWR56_RS00645 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CWR56_RS00650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS00655 PF02378 Phosphotransferase system, EIIC CWR56_RS00665 PF01112 Asparaginase CWR56_RS00670 PF01546 Peptidase family M20/M25/M40 CWR56_RS00675 PF03932 CutC family CWR56_RS00680 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CWR56_RS00680 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CWR56_RS00685 PF01043 SecA preprotein cross-linking domain CWR56_RS00685 PF07516 SecA Wing and Scaffold domain CWR56_RS00685 PF02810 SEC-C motif CWR56_RS00685 PF07517 SecA DEAD-like domain CWR56_RS00695 PF16921 Tex protein YqgF-like domain CWR56_RS00695 PF17674 HHH domain CWR56_RS00695 PF00575 S1 RNA binding domain CWR56_RS00695 PF09371 Tex-like protein N-terminal domain CWR56_RS00700 PF01979 Amidohydrolase family CWR56_RS00715 PF02367 Threonylcarbamoyl adenosine biosynthesis protein TsaE CWR56_RS00720 PF00814 Glycoprotease family CWR56_RS00725 PF00583 Acetyltransferase (GNAT) family CWR56_RS00730 PF00814 Glycoprotease family CWR56_RS00735 PF02901 Pyruvate formate lyase-like CWR56_RS00735 PF01228 Glycine radical CWR56_RS00740 PF18524 High potential iron-sulfur protein like CWR56_RS00740 PF18671 4-Hydroxyphenylacetate decarboxylase subunit gamma N-terminal CWR56_RS00745 PF04055 Radical SAM superfamily CWR56_RS00765 PF00005 ABC transporter CWR56_RS00780 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS00780 PF00072 Response regulator receiver domain CWR56_RS00785 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS00785 PF00672 HAMP domain CWR56_RS00785 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS00785 PF13426 PAS domain CWR56_RS00790 PF12704 MacB-like periplasmic core domain CWR56_RS00790 PF00005 ABC transporter CWR56_RS00790 PF02687 FtsX-like permease family CWR56_RS00805 PF13520 Amino acid permease CWR56_RS00810 PF01546 Peptidase family M20/M25/M40 CWR56_RS00810 PF07687 Peptidase dimerisation domain CWR56_RS00815 PF02954 Bacterial regulatory protein, Fis family CWR56_RS00815 PF00158 Sigma-54 interaction domain CWR56_RS00815 PF13426 PAS domain CWR56_RS00830 PF01554 MatE CWR56_RS00835 PF12848 ABC transporter CWR56_RS00835 PF16326 ABC transporter C-terminal domain CWR56_RS00835 PF00005 ABC transporter CWR56_RS00840 PF02629 CoA binding domain CWR56_RS00840 PF06971 Putative DNA-binding protein N-terminus CWR56_RS00850 PF12838 4Fe-4S dicluster domain CWR56_RS00860 PF03063 Prismane/CO dehydrogenase family CWR56_RS00870 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS00885 PF02812 Glu/Leu/Phe/Val dehydrogenase, dimerisation domain CWR56_RS00885 PF00208 Glutamate/Leucine/Phenylalanine/Valine dehydrogenase CWR56_RS00910 PF18348 Bacterial dipeptidyl-peptidase Sh3 domain CWR56_RS00910 PF00877 NlpC/P60 family CWR56_RS00915 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CWR56_RS00915 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CWR56_RS00920 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CWR56_RS00925 PF01180 Dihydroorotate dehydrogenase CWR56_RS00930 PF00156 Phosphoribosyl transferase domain CWR56_RS00935 PF02558 Ketopantoate reductase PanE/ApbA CWR56_RS00935 PF08546 Ketopantoate reductase PanE/ApbA C terminal CWR56_RS00940 PF03466 LysR substrate binding domain CWR56_RS00940 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS00945 PF03601 Conserved hypothetical protein 698 CWR56_RS00955 PF13091 PLD-like domain CWR56_RS00955 PF13396 Phospholipase_D-nuclease N-terminal CWR56_RS00960 PF00166 Chaperonin 10 Kd subunit CWR56_RS00965 PF00118 TCP-1/cpn60 chaperonin family CWR56_RS00970 PF00731 AIR carboxylase CWR56_RS00975 PF01969 Protein of unknown function DUF111 CWR56_RS00980 PF01969 Protein of unknown function DUF111 CWR56_RS00985 PF00117 Glutamine amidotransferase class-I CWR56_RS00985 PF02540 NAD synthase CWR56_RS00985 PF00958 GMP synthase C terminal domain CWR56_RS01015 PF17760 UvrA interaction domain CWR56_RS01015 PF17755 UvrA DNA-binding domain CWR56_RS01015 PF00005 ABC transporter CWR56_RS01020 PF00563 EAL domain CWR56_RS01020 PF00196 Bacterial regulatory proteins, luxR family CWR56_RS01040 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS01050 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS01065 PF01797 Transposase IS200 like CWR56_RS01075 PF00881 Nitroreductase family CWR56_RS01080 PF00731 AIR carboxylase CWR56_RS01085 PF01259 SAICAR synthetase CWR56_RS01090 PF00156 Phosphoribosyl transferase domain CWR56_RS01095 PF02769 AIR synthase related protein, C-terminal domain CWR56_RS01095 PF00586 AIR synthase related protein, N-terminal domain CWR56_RS01100 PF00551 Formyl transferase CWR56_RS01105 PF01808 AICARFT/IMPCHase bienzyme CWR56_RS01105 PF02142 MGS-like domain CWR56_RS01110 PF02844 Phosphoribosylglycinamide synthetase, N domain CWR56_RS01110 PF02843 Phosphoribosylglycinamide synthetase, C domain CWR56_RS01110 PF01071 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CWR56_RS01115 PF18072 Formylglycinamide ribonucleotide amidotransferase linker domain CWR56_RS01115 PF02769 AIR synthase related protein, C-terminal domain CWR56_RS01115 PF00586 AIR synthase related protein, N-terminal domain CWR56_RS01120 PF04321 RmlD substrate binding domain CWR56_RS01125 PF00483 Nucleotidyl transferase CWR56_RS01130 PF00908 dTDP-4-dehydrorhamnose 3,5-epimerase CWR56_RS01135 PF16363 GDP-mannose 4,6 dehydratase CWR56_RS01140 PF01464 Transglycosylase SLT domain CWR56_RS01150 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CWR56_RS01175 PF02623 FliW protein CWR56_RS01180 PF02599 Global regulator protein family CWR56_RS01195 PF02465 Flagellar hook-associated protein 2 N-terminus CWR56_RS01195 PF07195 Flagellar hook-associated protein 2 C-terminus CWR56_RS01205 PF00700 Bacterial flagellin C-terminal helical region CWR56_RS01205 PF00669 Bacterial flagellin N-terminal helical region CWR56_RS01210 PF00535 Glycosyl transferase family 2 CWR56_RS01215 PF00535 Glycosyl transferase family 2 CWR56_RS01230 PF01820 D-ala D-ala ligase N-terminus CWR56_RS01230 PF07478 D-ala D-ala ligase C-terminus CWR56_RS01240 PF05523 WxcM-like, C-terminal CWR56_RS01245 PF01041 DegT/DnrJ/EryC1/StrS aminotransferase family CWR56_RS01250 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CWR56_RS01250 PF00460 Flagella basal body rod protein CWR56_RS01255 PF00460 Flagella basal body rod protein CWR56_RS01255 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CWR56_RS01260 PF02049 Flagellar hook-basal body complex protein FliE CWR56_RS01265 PF01514 Secretory protein of YscJ/FliF family CWR56_RS01265 PF08345 Flagellar M-ring protein C-terminal CWR56_RS01270 PF14841 FliG middle domain CWR56_RS01270 PF14842 FliG N-terminal domain CWR56_RS01270 PF01706 FliG C-terminal domain CWR56_RS01280 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CWR56_RS01280 PF02874 ATP synthase alpha/beta family, beta-barrel domain CWR56_RS01280 PF18269 T3SS EscN ATPase C-terminal domain CWR56_RS01295 PF03963 Flagellar hook capping protein - N-terminal region CWR56_RS01300 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CWR56_RS01300 PF00460 Flagella basal body rod protein CWR56_RS01315 PF13677 Membrane MotB of proton-channel complex MotA/MotB CWR56_RS01315 PF00691 OmpA family CWR56_RS01330 PF00813 FliP family CWR56_RS01335 PF01313 Bacterial export proteins, family 3 CWR56_RS01340 PF01312 FlhB HrpN YscU SpaS Family CWR56_RS01345 PF00771 FHIPEP family CWR56_RS01350 PF00448 SRP54-type protein, GTPase domain CWR56_RS01355 PF10609 NUBPL iron-transfer P-loop NTPase CWR56_RS01360 PF04542 Sigma-70 region 2 CWR56_RS01360 PF04539 Sigma-70 region 3 CWR56_RS01360 PF04545 Sigma-70, region 4 CWR56_RS01375 PF00460 Flagella basal body rod protein CWR56_RS01375 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CWR56_RS01380 PF06429 Flagellar basal body rod FlgEFG protein C-terminal CWR56_RS01380 PF00460 Flagella basal body rod protein CWR56_RS01390 PF04509 CheC-like family CWR56_RS01390 PF01052 Type III flagellar switch regulator (C-ring) FliN C-term CWR56_RS01400 PF00183 Hsp90 protein CWR56_RS01405 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS01410 PF04055 Radical SAM superfamily CWR56_RS01415 PF12833 Helix-turn-helix domain CWR56_RS01425 PF01638 HxlR-like helix-turn-helix CWR56_RS01450 PF03610 PTS system fructose IIA component CWR56_RS01450 PF00874 PRD domain CWR56_RS01450 PF00158 Sigma-54 interaction domain CWR56_RS01455 PF00874 PRD domain CWR56_RS01455 PF03610 PTS system fructose IIA component CWR56_RS01455 PF00158 Sigma-54 interaction domain CWR56_RS01470 PF03830 PTS system sorbose subfamily IIB component CWR56_RS01475 PF03609 PTS system sorbose-specific iic component CWR56_RS01480 PF03613 PTS system mannose/fructose/sorbose family IID component CWR56_RS01490 PF01546 Peptidase family M20/M25/M40 CWR56_RS01500 PF01381 Helix-turn-helix CWR56_RS01505 PF13396 Phospholipase_D-nuclease N-terminal CWR56_RS01510 PF13732 Domain of unknown function (DUF4162) CWR56_RS01510 PF00005 ABC transporter CWR56_RS01530 PF04055 Radical SAM superfamily CWR56_RS01530 PF06968 Biotin and Thiamin Synthesis associated domain CWR56_RS01535 PF00356 Bacterial regulatory proteins, lacI family CWR56_RS01540 PF00294 pfkB family carbohydrate kinase CWR56_RS01545 PF13407 Periplasmic binding protein domain CWR56_RS01550 PF00005 ABC transporter CWR56_RS01555 PF02653 Branched-chain amino acid transport system / permease component CWR56_RS01560 PF01546 Peptidase family M20/M25/M40 CWR56_RS01560 PF07687 Peptidase dimerisation domain CWR56_RS01570 PF01546 Peptidase family M20/M25/M40 CWR56_RS01610 PF01022 Bacterial regulatory protein, arsR family CWR56_RS01615 PF00403 Heavy-metal-associated domain CWR56_RS01635 PF09335 SNARE associated Golgi protein CWR56_RS01660 PF00005 ABC transporter CWR56_RS01670 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS01670 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS01675 PF00072 Response regulator receiver domain CWR56_RS01675 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS01695 PF01891 Cobalt uptake substrate-specific transmembrane region CWR56_RS01700 PF02553 Cobalt transport protein component CbiN CWR56_RS01705 PF02361 Cobalt transport protein CWR56_RS01710 PF00005 ABC transporter CWR56_RS01715 PF13361 UvrD-like helicase C-terminal domain CWR56_RS01715 PF00580 UvrD/REP helicase N-terminal domain CWR56_RS01720 PF02127 Aminopeptidase I zinc metalloprotease (M18) CWR56_RS01730 PF00160 Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD CWR56_RS01740 PF02833 DHHA2 domain CWR56_RS01740 PF00571 CBS domain CWR56_RS01740 PF01368 DHH family CWR56_RS01740 PF07085 DRTGG domain CWR56_RS01745 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS01745 PF00171 Aldehyde dehydrogenase family CWR56_RS01755 PF00005 ABC transporter CWR56_RS01765 PF17203 Single cache domain 3 CWR56_RS01765 PF14689 Sensor_kinase_SpoOB-type, alpha-helical domain CWR56_RS01765 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS01765 PF00989 PAS fold CWR56_RS01770 PF04397 LytTr DNA-binding domain CWR56_RS01770 PF00072 Response regulator receiver domain CWR56_RS01795 PF00753 Metallo-beta-lactamase superfamily CWR56_RS01795 PF16123 Hydroxyacylglutathione hydrolase C-terminus CWR56_RS01800 PF04607 Region found in RelA / SpoT proteins CWR56_RS01845 PF00367 phosphotransferase system, EIIB CWR56_RS01845 PF02378 Phosphotransferase system, EIIC CWR56_RS01845 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS01850 PF00232 Glycosyl hydrolase family 1 CWR56_RS01855 PF00874 PRD domain CWR56_RS01855 PF03123 CAT RNA binding domain CWR56_RS01865 PF00733 Asparagine synthase CWR56_RS01865 PF13537 Glutamine amidotransferase domain CWR56_RS01880 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CWR56_RS01880 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CWR56_RS01885 PF02515 CoA-transferase family III CWR56_RS01890 PF01869 BadF/BadG/BcrA/BcrD ATPase family CWR56_RS01895 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CWR56_RS01900 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CWR56_RS01905 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CWR56_RS01905 PF02770 Acyl-CoA dehydrogenase, middle domain CWR56_RS01905 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CWR56_RS01910 PF01012 Electron transfer flavoprotein domain CWR56_RS01915 PF00766 Electron transfer flavoprotein FAD-binding domain CWR56_RS01915 PF01012 Electron transfer flavoprotein domain CWR56_RS01915 PF13237 4Fe-4S dicluster domain CWR56_RS01920 PF02954 Bacterial regulatory protein, Fis family CWR56_RS01920 PF00158 Sigma-54 interaction domain CWR56_RS01920 PF13188 PAS domain CWR56_RS01925 PF01116 Fructose-bisphosphate aldolase class-II CWR56_RS01935 PF01479 S4 domain CWR56_RS01935 PF00849 RNA pseudouridylate synthase CWR56_RS01940 PF05958 tRNA (Uracil-5-)-methyltransferase CWR56_RS01950 PF13361 UvrD-like helicase C-terminal domain CWR56_RS01950 PF00580 UvrD/REP helicase N-terminal domain CWR56_RS01960 PF02486 Replication initiation factor CWR56_RS01960 PF18106 Rolling Circle replication initiation protein N-terminal domain CWR56_RS02030 PF00158 Sigma-54 interaction domain CWR56_RS02030 PF13426 PAS domain CWR56_RS02030 PF02954 Bacterial regulatory protein, Fis family CWR56_RS02045 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS02050 PF16552 D-ornithine 4,5-aminomutase alpha-subunit CWR56_RS02055 PF09043 D-Lysine 5,6-aminomutase TIM-barrel domain of alpha subunit CWR56_RS02055 PF16554 Dimerisation domain of d-ornithine 4,5-aminomutase CWR56_RS02055 PF02310 B12 binding domain CWR56_RS02060 PF13941 MutL protein CWR56_RS02065 PF01168 Alanine racemase, N-terminal domain CWR56_RS02070 PF03553 Na+/H+ antiporter family CWR56_RS02085 PF12833 Helix-turn-helix domain CWR56_RS02090 PF13538 UvrD-like helicase C-terminal domain CWR56_RS02095 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS02100 PF00005 ABC transporter CWR56_RS02110 PF00989 PAS fold CWR56_RS02110 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS02110 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS02115 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS02115 PF00072 Response regulator receiver domain CWR56_RS02120 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS02120 PF17754 MftR C-terminal domain CWR56_RS02125 PF00753 Metallo-beta-lactamase superfamily CWR56_RS02135 PF01380 SIS domain CWR56_RS02135 PF01418 Helix-turn-helix domain, rpiR family CWR56_RS02150 PF00128 Alpha amylase, catalytic domain CWR56_RS02155 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS02155 PF02378 Phosphotransferase system, EIIC CWR56_RS02155 PF00367 phosphotransferase system, EIIB CWR56_RS02160 PF05569 BlaR1 peptidase M56 CWR56_RS02160 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS02165 PF03965 Penicillinase repressor CWR56_RS02170 PF03358 NADPH-dependent FMN reductase CWR56_RS02200 PF00005 ABC transporter CWR56_RS02215 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS02215 PF00072 Response regulator receiver domain CWR56_RS02220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS02220 PF13426 PAS domain CWR56_RS02220 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS02220 PF00672 HAMP domain CWR56_RS02225 PF02687 FtsX-like permease family CWR56_RS02225 PF12704 MacB-like periplasmic core domain CWR56_RS02225 PF00005 ABC transporter CWR56_RS02230 PF00005 ABC transporter CWR56_RS02240 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS02240 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS02245 PF00072 Response regulator receiver domain CWR56_RS02245 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS02250 PF00795 Carbon-nitrogen hydrolase CWR56_RS02255 PF00893 Small Multidrug Resistance protein CWR56_RS02260 PF01259 SAICAR synthetase CWR56_RS02265 PF08240 Alcohol dehydrogenase GroES-like domain CWR56_RS02265 PF00107 Zinc-binding dehydrogenase CWR56_RS02275 PF03830 PTS system sorbose subfamily IIB component CWR56_RS02285 PF03613 PTS system mannose/fructose/sorbose family IID component CWR56_RS02305 PF00072 Response regulator receiver domain CWR56_RS02305 PF04397 LytTr DNA-binding domain CWR56_RS02320 PF13186 Iron-sulfur cluster-binding domain CWR56_RS02320 PF04055 Radical SAM superfamily CWR56_RS02325 PF04055 Radical SAM superfamily CWR56_RS02325 PF13186 Iron-sulfur cluster-binding domain CWR56_RS02335 PF04055 Radical SAM superfamily CWR56_RS02335 PF13186 Iron-sulfur cluster-binding domain CWR56_RS02345 PF00005 ABC transporter CWR56_RS02350 PF00005 ABC transporter CWR56_RS02350 PF00664 ABC transporter transmembrane region CWR56_RS02355 PF00768 D-alanyl-D-alanine carboxypeptidase CWR56_RS02355 PF07943 Penicillin-binding protein 5, C-terminal domain CWR56_RS02360 PF03610 PTS system fructose IIA component CWR56_RS02360 PF00158 Sigma-54 interaction domain CWR56_RS02360 PF00874 PRD domain CWR56_RS02380 PF13493 Domain of unknown function (DUF4118) CWR56_RS02380 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS02380 PF02702 Osmosensitive K+ channel His kinase sensor domain CWR56_RS02380 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS02385 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS02385 PF00072 Response regulator receiver domain CWR56_RS02395 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS02395 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS02395 PF00563 EAL domain CWR56_RS02405 PF01546 Peptidase family M20/M25/M40 CWR56_RS02405 PF07687 Peptidase dimerisation domain CWR56_RS02410 PF03806 AbgT putative transporter family CWR56_RS02435 PF13280 WYL domain CWR56_RS02435 PF08279 HTH domain CWR56_RS02445 PF00072 Response regulator receiver domain CWR56_RS02450 PF04509 CheC-like family CWR56_RS02455 PF03975 CheD chemotactic sensory transduction CWR56_RS02460 PF01584 CheW-like domain CWR56_RS02465 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS02465 PF00072 Response regulator receiver domain CWR56_RS02470 PF00015 Methyl-accepting chemotaxis protein (MCP) signalling domain CWR56_RS02470 PF02203 Tar ligand binding domain homologue CWR56_RS02470 PF00672 HAMP domain CWR56_RS02475 PF01627 Hpt domain CWR56_RS02475 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS02475 PF02895 Signal transducing histidine kinase, homodimeric domain CWR56_RS02475 PF01584 CheW-like domain CWR56_RS02475 PF07194 P2 response regulator binding domain CWR56_RS02480 PF01584 CheW-like domain CWR56_RS02485 PF01739 CheR methyltransferase, SAM binding domain CWR56_RS02485 PF03705 CheR methyltransferase, all-alpha domain CWR56_RS02490 PF00072 Response regulator receiver domain CWR56_RS02490 PF01339 CheB methylesterase CWR56_RS02500 PF02423 Ornithine cyclodeaminase/mu-crystallin family CWR56_RS02515 PF03965 Penicillinase repressor CWR56_RS02520 PF05569 BlaR1 peptidase M56 CWR56_RS02520 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS02540 PF13367 PrsW family intramembrane metalloprotease CWR56_RS02545 PF01189 16S rRNA methyltransferase RsmB/F CWR56_RS02545 PF17126 RsmF rRNA methyltransferase first C-terminal domain CWR56_RS02545 PF17125 N-terminal domain of 16S rRNA methyltransferase RsmF CWR56_RS02550 PF10502 Signal peptidase, peptidase S26 CWR56_RS02555 PF10502 Signal peptidase, peptidase S26 CWR56_RS02565 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CWR56_RS02565 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CWR56_RS02565 PF03129 Anticodon binding domain CWR56_RS02570 PF04960 Glutaminase CWR56_RS02580 PF01261 Xylose isomerase-like TIM barrel CWR56_RS02600 PF08331 Domain of unknown function (DUF1730) CWR56_RS02605 PF05362 Lon protease (S16) C-terminal proteolytic domain CWR56_RS02605 PF13654 AAA domain CWR56_RS02610 PF00730 HhH-GPD superfamily base excision DNA repair protein CWR56_RS02610 PF00633 Helix-hairpin-helix motif CWR56_RS02610 PF10576 Iron-sulfur binding domain of endonuclease III CWR56_RS02615 PF00588 SpoU rRNA Methylase family CWR56_RS02620 PF02645 Uncharacterised protein, DegV family COG1307 CWR56_RS02625 PF02608 ABC transporter substrate-binding protein PnrA-like CWR56_RS02630 PF02608 ABC transporter substrate-binding protein PnrA-like CWR56_RS02645 PF04286 Protein of unknown function (DUF445) CWR56_RS02650 PF03129 Anticodon binding domain CWR56_RS02650 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CWR56_RS02650 PF02824 TGS domain CWR56_RS02650 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CWR56_RS02685 PF00171 Aldehyde dehydrogenase family CWR56_RS02690 PF17932 Tetracyclin repressor-like, C-terminal domain CWR56_RS02690 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS02695 PF00391 PEP-utilising enzyme, mobile domain CWR56_RS02695 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CWR56_RS02705 PF00563 EAL domain CWR56_RS02705 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS02705 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS02710 PF17151 Periplasmic sensor domain CWR56_RS02710 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS02715 PF17151 Periplasmic sensor domain CWR56_RS02715 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS02745 PF09397 Ftsk gamma domain CWR56_RS02745 PF17854 FtsK alpha domain CWR56_RS02745 PF01580 FtsK/SpoIIIE family CWR56_RS02770 PF01507 Phosphoadenosine phosphosulfate reductase family CWR56_RS02770 PF11922 Domain of unknown function (DUF3440) CWR56_RS02775 PF02195 ParB-like nuclease domain CWR56_RS02790 PF05067 Manganese containing catalase CWR56_RS02805 PF02870 6-O-methylguanine DNA methyltransferase, ribonuclease-like domain CWR56_RS02805 PF01035 6-O-methylguanine DNA methyltransferase, DNA binding domain CWR56_RS02830 PF04229 GrpB protein CWR56_RS02850 PF00654 Voltage gated chloride channel CWR56_RS02870 PF04397 LytTr DNA-binding domain CWR56_RS02870 PF00072 Response regulator receiver domain CWR56_RS02875 PF02687 FtsX-like permease family CWR56_RS02880 PF00005 ABC transporter CWR56_RS02900 PF06445 GyrI-like small molecule binding domain CWR56_RS02900 PF13411 MerR HTH family regulatory protein CWR56_RS02945 PF03796 DnaB-like helicase C terminal domain CWR56_RS02945 PF00772 DnaB-like helicase N terminal domain CWR56_RS02965 PF00027 Cyclic nucleotide-binding domain CWR56_RS02965 PF13545 Crp-like helix-turn-helix domain CWR56_RS02970 PF01554 MatE CWR56_RS02980 PF08713 DNA alkylation repair enzyme CWR56_RS02990 PF12697 Alpha/beta hydrolase family CWR56_RS03035 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS03035 PF00072 Response regulator receiver domain CWR56_RS03040 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS03040 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS03045 PF00005 ABC transporter CWR56_RS03060 PF07729 FCD domain CWR56_RS03060 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS03065 PF07676 WD40-like Beta Propeller Repeat CWR56_RS03065 PF00326 Prolyl oligopeptidase family CWR56_RS03070 PF07676 WD40-like Beta Propeller Repeat CWR56_RS03070 PF00326 Prolyl oligopeptidase family CWR56_RS03090 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS03090 PF00155 Aminotransferase class I and II CWR56_RS03095 PF00005 ABC transporter CWR56_RS03110 PF00654 Voltage gated chloride channel CWR56_RS03130 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CWR56_RS03130 PF01473 Putative cell wall binding repeat CWR56_RS03130 PF11713 Peptidase C80 family CWR56_RS03130 PF12920 TcdA/TcdB pore forming domain CWR56_RS03130 PF12918 TcdB toxin N-terminal helical domain CWR56_RS03135 PF05105 Bacteriophage holin family CWR56_RS03145 PF12918 TcdB toxin N-terminal helical domain CWR56_RS03145 PF01473 Putative cell wall binding repeat CWR56_RS03145 PF12919 TcdA/TcdB catalytic glycosyltransferase domain CWR56_RS03145 PF11713 Peptidase C80 family CWR56_RS03145 PF12920 TcdA/TcdB pore forming domain CWR56_RS03180 PF00005 ABC transporter CWR56_RS03185 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS03185 PF00072 Response regulator receiver domain CWR56_RS03190 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS03190 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS03225 PF08281 Sigma-70, region 4 CWR56_RS03225 PF04542 Sigma-70 region 2 CWR56_RS03240 PF07969 Amidohydrolase family CWR56_RS03260 PF00083 Sugar (and other) transporter CWR56_RS03265 PF00474 Sodium:solute symporter family CWR56_RS03270 PF00356 Bacterial regulatory proteins, lacI family CWR56_RS03275 PF17862 AAA+ lid domain CWR56_RS03275 PF01434 Peptidase family M41 CWR56_RS03275 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS03280 PF00707 Translation initiation factor IF-3, C-terminal domain CWR56_RS03280 PF05198 Translation initiation factor IF-3, N-terminal domain CWR56_RS03285 PF01632 Ribosomal protein L35 CWR56_RS03290 PF00453 Ribosomal protein L20 CWR56_RS03325 PF09278 MerR, DNA binding CWR56_RS03325 PF00376 MerR family regulatory protein CWR56_RS03345 PF02386 Cation transport protein CWR56_RS03350 PF02254 TrkA-N domain CWR56_RS03350 PF02080 TrkA-C domain CWR56_RS03355 PF00588 SpoU rRNA Methylase family CWR56_RS03355 PF08032 RNA 2'-O ribose methyltransferase substrate binding CWR56_RS03360 PF02912 Aminoacyl tRNA synthetase class II, N-terminal domain CWR56_RS03360 PF01409 tRNA synthetases class II core domain (F) CWR56_RS03365 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CWR56_RS03365 PF01588 Putative tRNA binding domain CWR56_RS03365 PF03483 B3/4 domain CWR56_RS03365 PF03484 tRNA synthetase B5 domain CWR56_RS03365 PF03147 Ferredoxin-fold anticodon binding domain CWR56_RS03380 PF01136 Peptidase family U32 CWR56_RS03380 PF12392 Collagenase CWR56_RS03390 PF00293 NUDIX domain CWR56_RS03400 PF05230 MASE2 domain CWR56_RS03400 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS03405 PF07687 Peptidase dimerisation domain CWR56_RS03405 PF01546 Peptidase family M20/M25/M40 CWR56_RS03410 PF01713 Smr domain CWR56_RS03410 PF00488 MutS domain V CWR56_RS03415 PF04463 Protein of unknown function (DUF523) CWR56_RS03420 PF03485 Arginyl tRNA synthetase N terminal domain CWR56_RS03420 PF00750 tRNA synthetases class I (R) CWR56_RS03420 PF05746 DALR anticodon binding domain CWR56_RS03435 PF04055 Radical SAM superfamily CWR56_RS03435 PF02310 B12 binding domain CWR56_RS03450 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS03450 PF03466 LysR substrate binding domain CWR56_RS03460 PF01515 Phosphate acetyl/butaryl transferase CWR56_RS03465 PF03063 Prismane/CO dehydrogenase family CWR56_RS03470 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CWR56_RS03475 PF01268 Formate--tetrahydrofolate ligase CWR56_RS03480 PF04961 Formiminotransferase-cyclodeaminase CWR56_RS03485 PF00763 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CWR56_RS03485 PF02882 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CWR56_RS03495 PF02219 Methylenetetrahydrofolate reductase CWR56_RS03495 PF02574 Homocysteine S-methyltransferase CWR56_RS03500 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CWR56_RS03500 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS03510 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CWR56_RS03515 PF04060 Putative Fe-S cluster CWR56_RS03515 PF03599 CO dehydrogenase/acetyl-CoA synthase delta subunit CWR56_RS03520 PF00809 Pterin binding enzyme CWR56_RS03525 PF18537 Carbon monoxide dehydrogenase subunit alpha N-terminal domain CWR56_RS03525 PF03598 CO dehydrogenase/acetyl-CoA synthase complex beta subunit CWR56_RS03530 PF01597 Glycine cleavage H-protein CWR56_RS03545 PF06968 Biotin and Thiamin Synthesis associated domain CWR56_RS03545 PF04055 Radical SAM superfamily CWR56_RS03550 PF03099 Biotin/lipoate A/B protein ligase family CWR56_RS03570 PF02811 PHP domain CWR56_RS03585 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS03585 PF00266 Aminotransferase class-V CWR56_RS03590 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CWR56_RS03590 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CWR56_RS03595 PF04346 Ethanolamine utilisation protein, EutH CWR56_RS03600 PF08220 DeoR-like helix-turn-helix domain CWR56_RS03600 PF00455 DeoR C terminal sensor domain CWR56_RS03610 PF01618 MotA/TolQ/ExbB proton channel family CWR56_RS03615 PF13677 Membrane MotB of proton-channel complex MotA/MotB CWR56_RS03615 PF00691 OmpA family CWR56_RS03630 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS03630 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS03630 PF00563 EAL domain CWR56_RS03635 PF13361 UvrD-like helicase C-terminal domain CWR56_RS03635 PF00580 UvrD/REP helicase N-terminal domain CWR56_RS03640 PF00497 Bacterial extracellular solute-binding proteins, family 3 CWR56_RS03645 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS03650 PF00005 ABC transporter CWR56_RS03655 PF00266 Aminotransferase class-V CWR56_RS03660 PF02568 Thiamine biosynthesis protein (ThiI) CWR56_RS03660 PF02926 THUMP domain CWR56_RS03665 PF07963 Prokaryotic N-terminal methylation motif CWR56_RS03665 PF00114 Pilin (bacterial filament) CWR56_RS03670 PF00881 Nitroreductase family CWR56_RS03675 PF00563 EAL domain CWR56_RS03675 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS03675 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS03680 PF04055 Radical SAM superfamily CWR56_RS03685 PF01228 Glycine radical CWR56_RS03685 PF02901 Pyruvate formate lyase-like CWR56_RS03690 PF01699 Sodium/calcium exchanger protein CWR56_RS03695 PF00271 Helicase conserved C-terminal domain CWR56_RS03695 PF00270 DEAD/DEAH box helicase CWR56_RS03710 PF03608 PTS system enzyme II sorbitol-specific factor CWR56_RS03715 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CWR56_RS03715 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CWR56_RS03720 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CWR56_RS03720 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CWR56_RS03725 PF03829 PTS system glucitol/sorbitol-specific IIA component CWR56_RS03730 PF00106 short chain dehydrogenase CWR56_RS03735 PF00384 Molybdopterin oxidoreductase CWR56_RS03735 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CWR56_RS03735 PF01568 Molydopterin dinucleotide binding domain CWR56_RS03740 PF01740 STAS domain CWR56_RS03745 PF13581 Histidine kinase-like ATPase domain CWR56_RS03750 PF04542 Sigma-70 region 2 CWR56_RS03750 PF04539 Sigma-70 region 3 CWR56_RS03750 PF04545 Sigma-70, region 4 CWR56_RS03755 PF03862 SpoVAC/SpoVAEB sporulation membrane protein CWR56_RS03760 PF07451 Stage V sporulation protein AD (SpoVAD) CWR56_RS03770 PF00356 Bacterial regulatory proteins, lacI family CWR56_RS03785 PF01546 Peptidase family M20/M25/M40 CWR56_RS03795 PF01209 ubiE/COQ5 methyltransferase family CWR56_RS03810 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CWR56_RS03815 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS03815 PF00912 Transglycosylase CWR56_RS03825 PF05580 SpoIVB peptidase S55 CWR56_RS03825 PF17820 PDZ domain CWR56_RS03830 PF08239 Bacterial SH3 domain CWR56_RS03830 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS03835 PF12848 ABC transporter CWR56_RS03835 PF00005 ABC transporter CWR56_RS03850 PF01926 50S ribosome-binding GTPase CWR56_RS03850 PF13167 GTP-binding GTPase N-terminal CWR56_RS03850 PF16360 GTP-binding GTPase Middle Region CWR56_RS03865 PF01205 Uncharacterized protein family UPF0029 CWR56_RS03865 PF09186 Domain of unknown function (DUF1949) CWR56_RS03875 PF01925 Sulfite exporter TauE/SafE CWR56_RS03880 PF02540 NAD synthase CWR56_RS03885 PF01709 Transcriptional regulator CWR56_RS03890 PF00356 Bacterial regulatory proteins, lacI family CWR56_RS03895 PF00682 HMGL-like CWR56_RS03905 PF02515 CoA-transferase family III CWR56_RS03910 PF00378 Enoyl-CoA hydratase/isomerase CWR56_RS03920 PF02515 CoA-transferase family III CWR56_RS03925 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CWR56_RS03925 PF02770 Acyl-CoA dehydrogenase, middle domain CWR56_RS03925 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CWR56_RS03930 PF01012 Electron transfer flavoprotein domain CWR56_RS03935 PF00766 Electron transfer flavoprotein FAD-binding domain CWR56_RS03935 PF01012 Electron transfer flavoprotein domain CWR56_RS03935 PF13237 4Fe-4S dicluster domain CWR56_RS03940 PF00158 Sigma-54 interaction domain CWR56_RS03940 PF13426 PAS domain CWR56_RS03940 PF02954 Bacterial regulatory protein, Fis family CWR56_RS03960 PF12724 Flavodoxin domain CWR56_RS03965 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS03965 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS03965 PF00563 EAL domain CWR56_RS03980 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS03980 PF07729 FCD domain CWR56_RS03985 PF07690 Major Facilitator Superfamily CWR56_RS03990 PF02378 Phosphotransferase system, EIIC CWR56_RS03990 PF00367 phosphotransferase system, EIIB CWR56_RS03990 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS04000 PF12323 Helix-turn-helix domain CWR56_RS04000 PF01385 Probable transposase CWR56_RS04000 PF07282 Putative transposase DNA-binding domain CWR56_RS04005 PF00232 Glycosyl hydrolase family 1 CWR56_RS04010 PF03123 CAT RNA binding domain CWR56_RS04010 PF00874 PRD domain CWR56_RS04015 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS04015 PF00072 Response regulator receiver domain CWR56_RS04020 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS04020 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS04025 PF00005 ABC transporter CWR56_RS04040 PF02915 Rubrerythrin CWR56_RS04050 PF01880 Desulfoferrodoxin CWR56_RS04055 PF01645 Conserved region in glutamate synthase CWR56_RS04070 PF00271 Helicase conserved C-terminal domain CWR56_RS04070 PF00270 DEAD/DEAH box helicase CWR56_RS04075 PF00682 HMGL-like CWR56_RS04080 PF00330 Aconitase family (aconitate hydratase) CWR56_RS04085 PF00180 Isocitrate/isopropylmalate dehydrogenase CWR56_RS04085 PF18324 Hypothetical protein TT1725 CWR56_RS04090 PF01047 MarR family CWR56_RS04115 PF01557 Fumarylacetoacetate (FAA) hydrolase family CWR56_RS04120 PF02142 MGS-like domain CWR56_RS04120 PF01808 AICARFT/IMPCHase bienzyme CWR56_RS04130 PF00534 Glycosyl transferases group 1 CWR56_RS04130 PF13439 Glycosyltransferase Family 4 CWR56_RS04140 PF01048 Phosphorylase superfamily CWR56_RS04145 PF01381 Helix-turn-helix CWR56_RS04175 PF01546 Peptidase family M20/M25/M40 CWR56_RS04180 PF01106 NifU-like domain CWR56_RS04195 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS04200 PF12911 N-terminal TM domain of oligopeptide transport permease C CWR56_RS04200 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS04205 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CWR56_RS04210 PF00005 ABC transporter CWR56_RS04210 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CWR56_RS04215 PF00005 ABC transporter CWR56_RS04215 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CWR56_RS04220 PF03610 PTS system fructose IIA component CWR56_RS04220 PF00158 Sigma-54 interaction domain CWR56_RS04220 PF00874 PRD domain CWR56_RS04230 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS04235 PF02378 Phosphotransferase system, EIIC CWR56_RS04245 PF02056 Family 4 glycosyl hydrolase CWR56_RS04245 PF11975 Family 4 glycosyl hydrolase C-terminal domain CWR56_RS04250 PF01661 Macro domain CWR56_RS04255 PF12146 Serine aminopeptidase, S33 CWR56_RS04265 PF12727 PBP superfamily domain CWR56_RS04265 PF12728 Helix-turn-helix domain CWR56_RS04275 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS04280 PF00005 ABC transporter CWR56_RS04280 PF17850 CysA C-terminal regulatory domain CWR56_RS04280 PF12857 TOBE-like domain CWR56_RS04285 PF12464 Maltose acetyltransferase CWR56_RS04285 PF14602 Hexapeptide repeat of succinyl-transferase CWR56_RS04295 PF09383 NIL domain CWR56_RS04295 PF00005 ABC transporter CWR56_RS04300 PF02653 Branched-chain amino acid transport system / permease component CWR56_RS04305 PF04392 ABC transporter substrate binding protein CWR56_RS04310 PF00005 ABC transporter CWR56_RS04315 PF02653 Branched-chain amino acid transport system / permease component CWR56_RS04320 PF01256 Carbohydrate kinase CWR56_RS04320 PF03853 YjeF-related protein N-terminus CWR56_RS04330 PF01145 SPFH domain / Band 7 family CWR56_RS04335 PF00483 Nucleotidyl transferase CWR56_RS04340 PF00483 Nucleotidyl transferase CWR56_RS04345 PF08323 Starch synthase catalytic domain CWR56_RS04345 PF00534 Glycosyl transferases group 1 CWR56_RS04350 PF00343 Carbohydrate phosphorylase CWR56_RS04355 PF00395 S-layer homology domain CWR56_RS04355 PF00128 Alpha amylase, catalytic domain CWR56_RS04355 PF02903 Alpha amylase, N-terminal ig-like domain CWR56_RS04360 PF07729 FCD domain CWR56_RS04360 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS04365 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CWR56_RS04365 PF01276 Orn/Lys/Arg decarboxylase, major domain CWR56_RS04370 PF02675 S-adenosylmethionine decarboxylase CWR56_RS04375 PF17284 Spermidine synthase tetramerisation domain CWR56_RS04380 PF00491 Arginase family CWR56_RS04385 PF00313 'Cold-shock' DNA-binding domain CWR56_RS04395 PF13187 4Fe-4S dicluster domain CWR56_RS04395 PF02906 Iron only hydrogenase large subunit, C-terminal domain CWR56_RS04415 PF08903 Domain of unknown function (DUF1846) CWR56_RS04420 PF00817 impB/mucB/samB family CWR56_RS04420 PF11799 impB/mucB/samB family C-terminal domain CWR56_RS04420 PF11798 IMS family HHH motif CWR56_RS04425 PF00571 CBS domain CWR56_RS04425 PF00005 ABC transporter CWR56_RS04430 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS04435 PF01545 Cation efflux family CWR56_RS04435 PF16916 Dimerisation domain of Zinc Transporter CWR56_RS04465 PF01554 MatE CWR56_RS04470 PF00575 S1 RNA binding domain CWR56_RS04470 PF02401 LytB protein CWR56_RS04485 PF00682 HMGL-like CWR56_RS04485 PF08502 LeuA allosteric (dimerisation) domain CWR56_RS04490 PF00330 Aconitase family (aconitate hydratase) CWR56_RS04495 PF00694 Aconitase C-terminal domain CWR56_RS04500 PF00180 Isocitrate/isopropylmalate dehydrogenase CWR56_RS04510 PF00266 Aminotransferase class-V CWR56_RS04515 PF00389 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CWR56_RS04515 PF02826 D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain CWR56_RS04530 PF13426 PAS domain CWR56_RS04530 PF08448 PAS fold CWR56_RS04530 PF08447 PAS fold CWR56_RS04530 PF05231 MASE1 CWR56_RS04530 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS04530 PF00563 EAL domain CWR56_RS04535 PF11842 Domain of unknown function (DUF3362) CWR56_RS04535 PF08497 Radical SAM N-terminal CWR56_RS04535 PF04055 Radical SAM superfamily CWR56_RS04550 PF00005 ABC transporter CWR56_RS04555 PF04073 Aminoacyl-tRNA editing domain CWR56_RS04560 PF05681 Fumarate hydratase (Fumerase) CWR56_RS04570 PF00390 Malic enzyme, N-terminal domain CWR56_RS04570 PF03949 Malic enzyme, NAD binding domain CWR56_RS04590 PF07702 UTRA domain CWR56_RS04590 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS04595 PF01979 Amidohydrolase family CWR56_RS04600 PF01182 Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase CWR56_RS04610 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS04610 PF00072 Response regulator receiver domain CWR56_RS04615 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS04615 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS04615 PF00989 PAS fold CWR56_RS04615 PF16736 Single Cache-like CWR56_RS04620 PF00563 EAL domain CWR56_RS04620 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS04620 PF13426 PAS domain CWR56_RS04630 PF06445 GyrI-like small molecule binding domain CWR56_RS04630 PF13411 MerR HTH family regulatory protein CWR56_RS04635 PF00005 ABC transporter CWR56_RS04635 PF00664 ABC transporter transmembrane region CWR56_RS04640 PF00005 ABC transporter CWR56_RS04640 PF00664 ABC transporter transmembrane region CWR56_RS04670 PF08402 TOBE domain CWR56_RS04670 PF00005 ABC transporter CWR56_RS04675 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS04680 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS04685 PF13416 Bacterial extracellular solute-binding protein CWR56_RS04695 PF10096 Uncharacterized protein conserved in bacteria (DUF2334) CWR56_RS04705 PF03170 Bacterial cellulose synthase subunit CWR56_RS04715 PF02350 UDP-N-acetylglucosamine 2-epimerase CWR56_RS04720 PF01476 LysM domain CWR56_RS04720 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CWR56_RS04745 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS04745 PF08239 Bacterial SH3 domain CWR56_RS04750 PF04122 Putative cell wall binding repeat 2 CWR56_RS04750 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS04760 PF13361 UvrD-like helicase C-terminal domain CWR56_RS04760 PF00580 UvrD/REP helicase N-terminal domain CWR56_RS04770 PF12705 PD-(D/E)XK nuclease superfamily CWR56_RS04775 PF13361 UvrD-like helicase C-terminal domain CWR56_RS04775 PF12705 PD-(D/E)XK nuclease superfamily CWR56_RS04775 PF00580 UvrD/REP helicase N-terminal domain CWR56_RS04780 PF00149 Calcineurin-like phosphoesterase CWR56_RS04780 PF12320 Type 5 capsule protein repressor C-terminal domain CWR56_RS04785 PF13175 AAA ATPase domain CWR56_RS04790 PF01595 Cyclin M transmembrane N-terminal domain CWR56_RS04790 PF03471 Transporter associated domain CWR56_RS04790 PF00571 CBS domain CWR56_RS04795 PF01594 AI-2E family transporter CWR56_RS04800 PF01546 Peptidase family M20/M25/M40 CWR56_RS04800 PF07687 Peptidase dimerisation domain CWR56_RS04810 PF12850 Calcineurin-like phosphoesterase superfamily domain CWR56_RS04815 PF01513 ATP-NAD kinase CWR56_RS04820 PF00005 ABC transporter CWR56_RS04840 PF04073 Aminoacyl-tRNA editing domain CWR56_RS04845 PF02770 Acyl-CoA dehydrogenase, middle domain CWR56_RS04845 PF02771 Acyl-CoA dehydrogenase, N-terminal domain CWR56_RS04845 PF00441 Acyl-CoA dehydrogenase, C-terminal domain CWR56_RS04850 PF01012 Electron transfer flavoprotein domain CWR56_RS04855 PF00766 Electron transfer flavoprotein FAD-binding domain CWR56_RS04855 PF01012 Electron transfer flavoprotein domain CWR56_RS04860 PF00378 Enoyl-CoA hydratase/isomerase CWR56_RS04865 PF00725 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain CWR56_RS04865 PF02737 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain CWR56_RS04870 PF00108 Thiolase, N-terminal domain CWR56_RS04870 PF02803 Thiolase, C-terminal domain CWR56_RS04875 PF00849 RNA pseudouridylate synthase CWR56_RS04875 PF01479 S4 domain CWR56_RS04885 PF00550 Phosphopantetheine attachment site CWR56_RS04910 PF00356 Bacterial regulatory proteins, lacI family CWR56_RS04940 PF02811 PHP domain CWR56_RS04945 PF00155 Aminotransferase class I and II CWR56_RS04950 PF05979 Bacterial protein of unknown function (DUF896) CWR56_RS04955 PF02127 Aminopeptidase I zinc metalloprotease (M18) CWR56_RS04960 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS04960 PF07702 UTRA domain CWR56_RS04975 PF03830 PTS system sorbose subfamily IIB component CWR56_RS04980 PF03609 PTS system sorbose-specific iic component CWR56_RS04985 PF03613 PTS system mannose/fructose/sorbose family IID component CWR56_RS04990 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS04990 PF03466 LysR substrate binding domain CWR56_RS05000 PF00994 Probable molybdopterin binding domain CWR56_RS05000 PF03454 MoeA C-terminal region (domain IV) CWR56_RS05000 PF03453 MoeA N-terminal region (domain I and II) CWR56_RS05005 PF02606 Tetraacyldisaccharide-1-P 4'-kinase CWR56_RS05010 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS05015 PF00005 ABC transporter CWR56_RS05015 PF00664 ABC transporter transmembrane region CWR56_RS05025 PF01546 Peptidase family M20/M25/M40 CWR56_RS05025 PF07687 Peptidase dimerisation domain CWR56_RS05030 PF02535 ZIP Zinc transporter CWR56_RS05040 PF04397 LytTr DNA-binding domain CWR56_RS05040 PF00072 Response regulator receiver domain CWR56_RS05055 PF01228 Glycine radical CWR56_RS05055 PF02901 Pyruvate formate lyase-like CWR56_RS05060 PF13187 4Fe-4S dicluster domain CWR56_RS05060 PF04055 Radical SAM superfamily CWR56_RS05065 PF01381 Helix-turn-helix CWR56_RS05065 PF07883 Cupin domain CWR56_RS05090 PF12833 Helix-turn-helix domain CWR56_RS05090 PF06445 GyrI-like small molecule binding domain CWR56_RS05110 PF00476 DNA polymerase family A CWR56_RS05110 PF02739 5'-3' exonuclease, N-terminal resolvase-like domain CWR56_RS05110 PF01367 5'-3' exonuclease, C-terminal SAM fold CWR56_RS05115 PF01121 Dephospho-CoA kinase CWR56_RS05125 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CWR56_RS05140 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CWR56_RS05145 PF00877 NlpC/P60 family CWR56_RS05155 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CWR56_RS05155 PF13237 4Fe-4S dicluster domain CWR56_RS05155 PF13375 RnfC Barrel sandwich hybrid domain CWR56_RS05155 PF10531 SLBB domain CWR56_RS05160 PF03116 NQR2, RnfD, RnfE family CWR56_RS05165 PF04205 FMN-binding domain CWR56_RS05170 PF02508 Rnf-Nqr subunit, membrane protein CWR56_RS05175 PF02508 Rnf-Nqr subunit, membrane protein CWR56_RS05180 PF00037 4Fe-4S binding domain CWR56_RS05180 PF13187 4Fe-4S dicluster domain CWR56_RS05180 PF04060 Putative Fe-S cluster CWR56_RS05185 PF02545 Maf-like protein CWR56_RS05190 PF04002 RadC-like JAB domain CWR56_RS05210 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS05215 PF03775 Septum formation inhibitor MinC, C-terminal domain CWR56_RS05220 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CWR56_RS05225 PF03776 Septum formation topological specificity factor MinE CWR56_RS05230 PF01098 Cell cycle protein CWR56_RS05235 PF02142 MGS-like domain CWR56_RS05240 PF03551 Transcriptional regulator PadR-like family CWR56_RS05255 PF00258 Flavodoxin CWR56_RS05255 PF00753 Metallo-beta-lactamase superfamily CWR56_RS05270 PF00575 S1 RNA binding domain CWR56_RS05270 PF10150 Ribonuclease E/G family CWR56_RS05275 PF00829 Ribosomal prokaryotic L21 protein CWR56_RS05285 PF01016 Ribosomal L27 protein CWR56_RS05290 PF09269 Domain of unknown function (DUF1967) CWR56_RS05290 PF01018 GTP1/OBG CWR56_RS05290 PF01926 50S ribosome-binding GTPase CWR56_RS05300 PF03447 Homoserine dehydrogenase, NAD binding domain CWR56_RS05300 PF00742 Homoserine dehydrogenase CWR56_RS05300 PF01842 ACT domain CWR56_RS05310 PF07670 Nucleoside recognition CWR56_RS05315 PF07729 FCD domain CWR56_RS05315 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS05320 PF09861 Lactate racemase N-terminal domain CWR56_RS05325 PF01012 Electron transfer flavoprotein domain CWR56_RS05330 PF01012 Electron transfer flavoprotein domain CWR56_RS05330 PF00766 Electron transfer flavoprotein FAD-binding domain CWR56_RS05335 PF02913 FAD linked oxidases, C-terminal domain CWR56_RS05335 PF01565 FAD binding domain CWR56_RS05340 PF05636 HIGH Nucleotidyl Transferase CWR56_RS05345 PF00871 Acetokinase family CWR56_RS05355 PF01783 Ribosomal L32p protein family CWR56_RS05365 PF02504 Fatty acid synthesis protein CWR56_RS05370 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CWR56_RS05370 PF08541 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal CWR56_RS05375 PF03060 Nitronate monooxygenase CWR56_RS05380 PF00698 Acyl transferase domain CWR56_RS05390 PF00550 Phosphopantetheine attachment site CWR56_RS05395 PF02801 Beta-ketoacyl synthase, C-terminal domain CWR56_RS05395 PF00109 Beta-ketoacyl synthase, N-terminal domain CWR56_RS05400 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS05400 PF07694 5TMR of 5TMR-LYT CWR56_RS05405 PF00158 Sigma-54 interaction domain CWR56_RS05405 PF13426 PAS domain CWR56_RS05405 PF02954 Bacterial regulatory protein, Fis family CWR56_RS05415 PF07722 Peptidase C26 CWR56_RS05420 PF13520 Amino acid permease CWR56_RS05430 PF06874 Firmicute fructose-1,6-bisphosphatase CWR56_RS05470 PF12685 SpoIIIAH-like protein CWR56_RS05475 PF03780 Asp23 family, cell envelope-related function CWR56_RS05480 PF01029 NusB family CWR56_RS05485 PF00814 Glycoprotease family CWR56_RS05490 PF02601 Exonuclease VII, large subunit CWR56_RS05490 PF13742 OB-fold nucleic acid binding domain CWR56_RS05500 PF00348 Polyprenyl synthetase CWR56_RS05505 PF02681 Divergent PAP2 family CWR56_RS05510 PF02779 Transketolase, pyrimidine binding domain CWR56_RS05510 PF02780 Transketolase, C-terminal domain CWR56_RS05510 PF13292 1-deoxy-D-xylulose-5-phosphate synthase CWR56_RS05515 PF01479 S4 domain CWR56_RS05515 PF01728 FtsJ-like methyltransferase CWR56_RS05520 PF02463 RecF/RecN/SMC N terminal domain CWR56_RS05530 PF00583 Acetyltransferase (GNAT) family CWR56_RS05535 PF00583 Acetyltransferase (GNAT) family CWR56_RS05540 PF17820 PDZ domain CWR56_RS05540 PF05580 SpoIVB peptidase S55 CWR56_RS05545 PF00072 Response regulator receiver domain CWR56_RS05545 PF08769 Sporulation initiation factor Spo0A C terminal CWR56_RS05560 PF00535 Glycosyl transferase family 2 CWR56_RS05575 PF00293 NUDIX domain CWR56_RS05585 PF00589 Phage integrase family CWR56_RS05585 PF02899 Phage integrase, N-terminal SAM-like domain CWR56_RS05590 PF01676 Metalloenzyme superfamily CWR56_RS05595 PF01048 Phosphorylase superfamily CWR56_RS05600 PF02885 Glycosyl transferase family, helical bundle domain CWR56_RS05600 PF07831 Pyrimidine nucleoside phosphorylase C-terminal domain CWR56_RS05600 PF00591 Glycosyl transferase family, a/b domain CWR56_RS05605 PF02618 YceG-like family CWR56_RS05610 PF01596 O-methyltransferase CWR56_RS05615 PF16325 Peptidase family U32 C-terminal domain CWR56_RS05615 PF01136 Peptidase family U32 CWR56_RS05620 PF03793 PASTA domain CWR56_RS05620 PF03717 Penicillin-binding Protein dimerisation domain CWR56_RS05620 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS05715 PF04892 VanZ like family CWR56_RS05725 PF04542 Sigma-70 region 2 CWR56_RS05725 PF04545 Sigma-70, region 4 CWR56_RS05755 PF01132 Elongation factor P (EF-P) OB domain CWR56_RS05755 PF08207 Elongation factor P (EF-P) KOW-like domain CWR56_RS05755 PF09285 Elongation factor P, C-terminal CWR56_RS05765 PF14622 Ribonuclease-III-like CWR56_RS05765 PF00035 Double-stranded RNA binding motif CWR56_RS05775 PF02463 RecF/RecN/SMC N terminal domain CWR56_RS05775 PF06470 SMC proteins Flexible Hinge Domain CWR56_RS05780 PF02881 SRP54-type protein, helical bundle domain CWR56_RS05780 PF00448 SRP54-type protein, GTPase domain CWR56_RS05785 PF04297 Putative helix-turn-helix protein, YlxM / p13 like CWR56_RS05790 PF00448 SRP54-type protein, GTPase domain CWR56_RS05790 PF02978 Signal peptide binding domain CWR56_RS05790 PF02881 SRP54-type protein, helical bundle domain CWR56_RS05795 PF00886 Ribosomal protein S16 CWR56_RS05805 PF05239 PRC-barrel domain CWR56_RS05805 PF01782 RimM N-terminal domain CWR56_RS05810 PF01746 tRNA (Guanine-1)-methyltransferase CWR56_RS05815 PF01245 Ribosomal protein L19 CWR56_RS05820 PF01926 50S ribosome-binding GTPase CWR56_RS05825 PF05525 Branched-chain amino acid transport protein CWR56_RS05830 PF05525 Branched-chain amino acid transport protein CWR56_RS05835 PF03477 ATP cone domain CWR56_RS05835 PF00317 Ribonucleotide reductase, all-alpha domain CWR56_RS05835 PF02867 Ribonucleotide reductase, barrel domain CWR56_RS05840 PF01351 Ribonuclease HII CWR56_RS05845 PF01070 FMN-dependent dehydrogenase CWR56_RS05870 PF00005 ABC transporter CWR56_RS05875 PF00072 Response regulator receiver domain CWR56_RS05875 PF00196 Bacterial regulatory proteins, luxR family CWR56_RS05880 PF07730 Histidine kinase CWR56_RS05885 PF02021 Uncharacterised protein family UPF0102 CWR56_RS05890 PF13335 Magnesium chelatase, subunit ChlI C-terminal CWR56_RS05890 PF01078 Magnesium chelatase, subunit ChlI CWR56_RS05895 PF02481 DNA recombination-mediator protein A CWR56_RS05895 PF17782 DprA winged helix domain CWR56_RS05900 PF01396 Topoisomerase DNA binding C4 zinc finger CWR56_RS05900 PF01751 Toprim domain CWR56_RS05900 PF01131 DNA topoisomerase CWR56_RS05905 PF08222 CodY helix-turn-helix domain CWR56_RS05905 PF06018 CodY GAF-like domain CWR56_RS05910 PF12002 MgsA AAA+ ATPase C terminal CWR56_RS05910 PF16193 AAA C-terminal domain CWR56_RS05910 PF05496 Holliday junction DNA helicase RuvB P-loop domain CWR56_RS05920 PF02082 Transcriptional regulator CWR56_RS05925 PF00266 Aminotransferase class-V CWR56_RS05930 PF01592 NifU-like N terminal domain CWR56_RS05940 PF01411 tRNA synthetases class II (A) CWR56_RS05940 PF02272 DHHA1 domain CWR56_RS05940 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CWR56_RS05945 PF06135 IreB regulatory phosphoprotein CWR56_RS05955 PF03652 Holliday junction resolvase CWR56_RS05960 PF06949 Protein of unknown function (DUF1292) CWR56_RS05965 PF01475 Ferric uptake regulator family CWR56_RS05975 PF00753 Metallo-beta-lactamase superfamily CWR56_RS05975 PF17770 Ribonuclease J C-terminal domain CWR56_RS05975 PF07521 Zn-dependent metallo-hydrolase RNA specificity domain CWR56_RS05985 PF00768 D-alanyl-D-alanine carboxypeptidase CWR56_RS05985 PF07943 Penicillin-binding protein 5, C-terminal domain CWR56_RS05995 PF02311 AraC-like ligand binding domain CWR56_RS05995 PF12833 Helix-turn-helix domain CWR56_RS06000 PF02163 Peptidase family M50 CWR56_RS06005 PF02616 Segregation and condensation protein ScpA CWR56_RS06010 PF04079 Segregation and condensation complex subunit ScpB CWR56_RS06030 PF02789 Cytosol aminopeptidase family, N-terminal domain CWR56_RS06030 PF00883 Cytosol aminopeptidase family, catalytic domain CWR56_RS06050 PF02146 Sir2 family CWR56_RS06055 PF13457 GW (Gly-Tryp) dipeptide domain CWR56_RS06055 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CWR56_RS06060 PF00929 Exonuclease CWR56_RS06060 PF02811 PHP domain CWR56_RS06060 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CWR56_RS06060 PF11490 DNA polymerase III polC-type N-terminus II CWR56_RS06060 PF07733 Bacterial DNA polymerase III alpha NTPase domain CWR56_RS06060 PF14579 Helix-hairpin-helix motif CWR56_RS06060 PF01336 OB-fold nucleic acid binding domain CWR56_RS06065 PF17384 RimP C-terminal SH3 domain CWR56_RS06065 PF02576 RimP N-terminal domain CWR56_RS06070 PF13184 NusA-like KH domain CWR56_RS06070 PF08529 NusA N-terminal domain CWR56_RS06070 PF00575 S1 RNA binding domain CWR56_RS06075 PF04296 Protein of unknown function (DUF448) CWR56_RS06080 PF01248 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family CWR56_RS06085 PF00009 Elongation factor Tu GTP binding domain CWR56_RS06085 PF04760 Translation initiation factor IF-2, N-terminal region CWR56_RS06085 PF11987 Translation-initiation factor 2 CWR56_RS06090 PF02033 Ribosome-binding factor A CWR56_RS06095 PF02272 DHHA1 domain CWR56_RS06095 PF01368 DHH family CWR56_RS06100 PF16198 tRNA pseudouridylate synthase B C-terminal domain CWR56_RS06100 PF01509 TruB family pseudouridylate synthase (N terminal domain) CWR56_RS06105 PF01687 Riboflavin kinase CWR56_RS06105 PF06574 FAD synthetase CWR56_RS06115 PF00312 Ribosomal protein S15 CWR56_RS06120 PF02645 Uncharacterised protein, DegV family COG1307 CWR56_RS06125 PF00013 KH domain CWR56_RS06125 PF00575 S1 RNA binding domain CWR56_RS06125 PF03725 3' exoribonuclease family, domain 2 CWR56_RS06125 PF01138 3' exoribonuclease family, domain 1 CWR56_RS06125 PF03726 Polyribonucleotide nucleotidyltransferase, RNA binding domain CWR56_RS06130 PF13739 Deacetylase PdaC CWR56_RS06130 PF01522 Polysaccharide deacetylase CWR56_RS06130 PF11738 Protein of unknown function (DUF3298) CWR56_RS06135 PF00675 Insulinase (Peptidase family M16) CWR56_RS06135 PF05193 Peptidase M16 inactive domain CWR56_RS06140 PF05239 PRC-barrel domain CWR56_RS06145 PF00696 Amino acid kinase family CWR56_RS06145 PF13840 ACT domain CWR56_RS06150 PF00574 Clp protease CWR56_RS06155 PF17854 FtsK alpha domain CWR56_RS06155 PF09397 Ftsk gamma domain CWR56_RS06155 PF01580 FtsK/SpoIIIE family CWR56_RS06165 PF00919 Uncharacterized protein family UPF0004 CWR56_RS06165 PF18693 TRAM domain CWR56_RS06165 PF04055 Radical SAM superfamily CWR56_RS06170 PF01066 CDP-alcohol phosphatidyltransferase CWR56_RS06175 PF00154 recA bacterial DNA recombination protein CWR56_RS06180 PF01966 HD domain CWR56_RS06180 PF12072 Domain of unknown function (DUF3552) CWR56_RS06180 PF00013 KH domain CWR56_RS06185 PF13426 PAS domain CWR56_RS06185 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS06185 PF00563 EAL domain CWR56_RS06195 PF10502 Signal peptidase, peptidase S26 CWR56_RS06200 PF02673 Bacitracin resistance protein BacA CWR56_RS06210 PF10415 Fumarase C C-terminus CWR56_RS06210 PF00206 Lyase CWR56_RS06220 PF00155 Aminotransferase class I and II CWR56_RS06230 PF03372 Endonuclease/Exonuclease/phosphatase family CWR56_RS06245 PF00534 Glycosyl transferases group 1 CWR56_RS06245 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CWR56_RS06250 PF03551 Transcriptional regulator PadR-like family CWR56_RS06270 PF00005 ABC transporter CWR56_RS06285 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS06285 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS06300 PF00313 'Cold-shock' DNA-binding domain CWR56_RS06330 PF01381 Helix-turn-helix CWR56_RS06375 PF00877 NlpC/P60 family CWR56_RS06375 PF01476 LysM domain CWR56_RS06375 PF08239 Bacterial SH3 domain CWR56_RS06390 PF04865 Baseplate J-like protein CWR56_RS06395 PF10076 Uncharacterised protein conserved in bacteria (DUF2313) CWR56_RS06440 PF01381 Helix-turn-helix CWR56_RS06445 PF07690 Major Facilitator Superfamily CWR56_RS06455 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CWR56_RS06455 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CWR56_RS06460 PF03600 Citrate transporter CWR56_RS06460 PF02080 TrkA-C domain CWR56_RS06465 PF03746 LamB/YcsF family CWR56_RS06470 PF01566 Natural resistance-associated macrophage protein CWR56_RS06475 PF02682 Carboxyltransferase domain, subdomain C and D CWR56_RS06480 PF02626 Carboxyltransferase domain, subdomain A and B CWR56_RS06485 PF08671 Anti-repressor SinI CWR56_RS06485 PF01381 Helix-turn-helix CWR56_RS06490 PF02746 Mandelate racemase / muconate lactonizing enzyme, N-terminal domain CWR56_RS06490 PF13378 Enolase C-terminal domain-like CWR56_RS06500 PF08530 X-Pro dipeptidyl-peptidase C-terminal non-catalytic domain CWR56_RS06500 PF02129 X-Pro dipeptidyl-peptidase (S15 family) CWR56_RS06530 PF01980 tRNA-methyltransferase O CWR56_RS06530 PF18389 TrmO C-terminal domain CWR56_RS06535 PF07687 Peptidase dimerisation domain CWR56_RS06535 PF01546 Peptidase family M20/M25/M40 CWR56_RS06540 PF02016 LD-carboxypeptidase N-terminal domain CWR56_RS06540 PF17676 LD-carboxypeptidase C-terminal domain CWR56_RS06555 PF03009 Glycerophosphoryl diester phosphodiesterase family CWR56_RS06560 PF00501 AMP-binding enzyme CWR56_RS06560 PF13193 AMP-binding enzyme C-terminal domain CWR56_RS06560 PF00668 Condensation domain CWR56_RS06560 PF00550 Phosphopantetheine attachment site CWR56_RS06575 PF12848 ABC transporter CWR56_RS06575 PF16326 ABC transporter C-terminal domain CWR56_RS06575 PF00005 ABC transporter CWR56_RS06585 PF00155 Aminotransferase class I and II CWR56_RS06585 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS06590 PF01820 D-ala D-ala ligase N-terminus CWR56_RS06590 PF07478 D-ala D-ala ligase C-terminus CWR56_RS06595 PF00994 Probable molybdopterin binding domain CWR56_RS06595 PF18146 Damage-inducible protein CinA KH domain CWR56_RS06595 PF02464 Competence-damaged protein CWR56_RS06610 PF00158 Sigma-54 interaction domain CWR56_RS06610 PF13188 PAS domain CWR56_RS06610 PF02954 Bacterial regulatory protein, Fis family CWR56_RS06620 PF04055 Radical SAM superfamily CWR56_RS06620 PF16199 Radical_SAM C-terminal domain CWR56_RS06665 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS06665 PF05231 MASE1 CWR56_RS06665 PF00563 EAL domain CWR56_RS06665 PF08447 PAS fold CWR56_RS06665 PF08448 PAS fold CWR56_RS06665 PF13426 PAS domain CWR56_RS06670 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS06675 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS06675 PF00563 EAL domain CWR56_RS06675 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS06680 PF13411 MerR HTH family regulatory protein CWR56_RS06680 PF06445 GyrI-like small molecule binding domain CWR56_RS06695 PF02308 MgtC family CWR56_RS06700 PF00857 Isochorismatase family CWR56_RS06720 PF01522 Polysaccharide deacetylase CWR56_RS06725 PF00929 Exonuclease CWR56_RS06725 PF13307 Helicase C-terminal domain CWR56_RS06730 PF00075 RNase H CWR56_RS06735 PF10417 C-terminal domain of 1-Cys peroxiredoxin CWR56_RS06735 PF00578 AhpC/TSA family CWR56_RS06750 PF04294 VanW like protein CWR56_RS06755 PF13188 PAS domain CWR56_RS06755 PF02954 Bacterial regulatory protein, Fis family CWR56_RS06755 PF00158 Sigma-54 interaction domain CWR56_RS06765 PF03788 LrgA family CWR56_RS06770 PF04172 LrgB-like family CWR56_RS06775 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CWR56_RS06775 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CWR56_RS06785 PF00188 Cysteine-rich secretory protein family CWR56_RS06790 PF13739 Deacetylase PdaC CWR56_RS06790 PF01522 Polysaccharide deacetylase CWR56_RS06790 PF11738 Protein of unknown function (DUF3298) CWR56_RS06795 PF00117 Glutamine amidotransferase class-I CWR56_RS06800 PF04715 Anthranilate synthase component I, N terminal region CWR56_RS06800 PF00425 chorismate binding enzyme CWR56_RS06805 PF01063 Amino-transferase class IV CWR56_RS06815 PF01227 GTP cyclohydrolase I CWR56_RS06820 PF00809 Pterin binding enzyme CWR56_RS06825 PF02152 Dihydroneopterin aldolase CWR56_RS06830 PF01288 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK) CWR56_RS06835 PF00793 DAHP synthetase I family CWR56_RS06835 PF18152 DAHP synthase ferredoxin-like domain CWR56_RS06840 PF10410 DnaB-helicase binding domain of primase CWR56_RS06840 PF08275 DNA primase catalytic core, N-terminal domain CWR56_RS06840 PF01807 CHC2 zinc finger CWR56_RS06845 PF04539 Sigma-70 region 3 CWR56_RS06845 PF04542 Sigma-70 region 2 CWR56_RS06845 PF00140 Sigma-70 factor, region 1.2 CWR56_RS06845 PF03979 Sigma-70 factor, region 1.1 CWR56_RS06845 PF04545 Sigma-70, region 4 CWR56_RS06850 PF04816 tRNA (adenine(22)-N(1))-methyltransferase CWR56_RS06855 PF01784 NIF3 (NGG1p interacting factor 3) CWR56_RS06860 PF03358 NADPH-dependent FMN reductase CWR56_RS06880 PF00155 Aminotransferase class I and II CWR56_RS06880 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS06890 PF00072 Response regulator receiver domain CWR56_RS06890 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS06895 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS06895 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS06895 PF00672 HAMP domain CWR56_RS06900 PF02687 FtsX-like permease family CWR56_RS06900 PF12704 MacB-like periplasmic core domain CWR56_RS06900 PF00005 ABC transporter CWR56_RS06915 PF00144 Beta-lactamase CWR56_RS06920 PF00581 Rhodanese-like domain CWR56_RS06920 PF17773 UPF0176 acylphosphatase like domain CWR56_RS06925 PF01061 ABC-2 type transporter CWR56_RS06930 PF00664 ABC transporter transmembrane region CWR56_RS06930 PF00005 ABC transporter CWR56_RS06935 PF00664 ABC transporter transmembrane region CWR56_RS06935 PF00005 ABC transporter CWR56_RS06940 PF02915 Rubrerythrin CWR56_RS06945 PF01738 Dienelactone hydrolase family CWR56_RS06950 PF00563 EAL domain CWR56_RS06950 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS06950 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS06965 PF07670 Nucleoside recognition CWR56_RS06965 PF02421 Ferrous iron transport protein B CWR56_RS06965 PF17910 FeoB cytosolic helical domain CWR56_RS06965 PF07664 Ferrous iron transport protein B C terminus CWR56_RS06980 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS06985 PF00005 ABC transporter CWR56_RS07015 PF00005 ABC transporter CWR56_RS07015 PF09383 NIL domain CWR56_RS07020 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS07025 PF03180 NLPA lipoprotein CWR56_RS07030 PF16736 Single Cache-like CWR56_RS07030 PF00989 PAS fold CWR56_RS07030 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS07030 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS07035 PF02245 Methylpurine-DNA glycosylase (MPG) CWR56_RS07045 PF14748 Pyrroline-5-carboxylate reductase dimerisation CWR56_RS07045 PF03807 NADP oxidoreductase coenzyme F420-dependent CWR56_RS07050 PF06207 Protein of unknown function (DUF1002) CWR56_RS07060 PF04542 Sigma-70 region 2 CWR56_RS07060 PF03979 Sigma-70 factor, region 1.1 CWR56_RS07060 PF00140 Sigma-70 factor, region 1.2 CWR56_RS07060 PF04539 Sigma-70 region 3 CWR56_RS07060 PF04545 Sigma-70, region 4 CWR56_RS07075 PF12323 Helix-turn-helix domain CWR56_RS07075 PF07282 Putative transposase DNA-binding domain CWR56_RS07075 PF01385 Probable transposase CWR56_RS07080 PF03023 Lipid II flippase MurJ CWR56_RS07085 PF01791 DeoC/LacD family aldolase CWR56_RS07095 PF00005 ABC transporter CWR56_RS07105 PF01554 MatE CWR56_RS07120 PF12801 4Fe-4S binding domain CWR56_RS07120 PF04205 FMN-binding domain CWR56_RS07150 PF02569 Pantoate-beta-alanine ligase CWR56_RS07155 PF02548 Ketopantoate hydroxymethyltransferase CWR56_RS07165 PF13426 PAS domain CWR56_RS07165 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS07165 PF00563 EAL domain CWR56_RS07175 PF06445 GyrI-like small molecule binding domain CWR56_RS07175 PF13411 MerR HTH family regulatory protein CWR56_RS07180 PF07670 Nucleoside recognition CWR56_RS07180 PF07664 Ferrous iron transport protein B C terminus CWR56_RS07180 PF02421 Ferrous iron transport protein B CWR56_RS07180 PF17910 FeoB cytosolic helical domain CWR56_RS07200 PF00579 tRNA synthetases class I (W and Y) CWR56_RS07200 PF01479 S4 domain CWR56_RS07205 PF18627 Peptidoglycan GlcNAc deacetylase N-terminal domain CWR56_RS07205 PF01522 Polysaccharide deacetylase CWR56_RS07215 PF02915 Rubrerythrin CWR56_RS07220 PF04015 Domain of unknown function (DUF362) CWR56_RS07225 PF01979 Amidohydrolase family CWR56_RS07230 PF12704 MacB-like periplasmic core domain CWR56_RS07230 PF02687 FtsX-like permease family CWR56_RS07235 PF12704 MacB-like periplasmic core domain CWR56_RS07235 PF02687 FtsX-like permease family CWR56_RS07235 PF00005 ABC transporter CWR56_RS07245 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS07250 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS07250 PF00072 Response regulator receiver domain CWR56_RS07255 PF00005 ABC transporter CWR56_RS07260 PF02687 FtsX-like permease family CWR56_RS07275 PF00175 Oxidoreductase NAD-binding domain CWR56_RS07275 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CWR56_RS07280 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS07280 PF13247 4Fe-4S dicluster domain CWR56_RS07280 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CWR56_RS07285 PF00563 EAL domain CWR56_RS07285 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS07285 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS07290 PF00005 ABC transporter CWR56_RS07295 PF02687 FtsX-like permease family CWR56_RS07300 PF01554 MatE CWR56_RS07310 PF02525 Flavodoxin-like fold CWR56_RS07325 PF03006 Haemolysin-III related CWR56_RS07335 PF13393 Histidyl-tRNA synthetase CWR56_RS07340 PF01634 ATP phosphoribosyltransferase CWR56_RS07345 PF00155 Aminotransferase class I and II CWR56_RS07350 PF00475 Imidazoleglycerol-phosphate dehydratase CWR56_RS07355 PF00117 Glutamine amidotransferase class-I CWR56_RS07360 PF00977 Histidine biosynthesis protein CWR56_RS07365 PF00977 Histidine biosynthesis protein CWR56_RS07370 PF01502 Phosphoribosyl-AMP cyclohydrolase CWR56_RS07370 PF01503 Phosphoribosyl-ATP pyrophosphohydrolase CWR56_RS07375 PF13520 Amino acid permease CWR56_RS07380 PF01522 Polysaccharide deacetylase CWR56_RS07390 PF08281 Sigma-70, region 4 CWR56_RS07390 PF04542 Sigma-70 region 2 CWR56_RS07395 PF11738 Protein of unknown function (DUF3298) CWR56_RS07395 PF13739 Deacetylase PdaC CWR56_RS07400 PF11738 Protein of unknown function (DUF3298) CWR56_RS07400 PF13739 Deacetylase PdaC CWR56_RS07405 PF02625 XdhC and CoxI family CWR56_RS07405 PF13478 XdhC Rossmann domain CWR56_RS07420 PF01450 Acetohydroxy acid isomeroreductase, catalytic domain CWR56_RS07420 PF07991 Acetohydroxy acid isomeroreductase, NADPH-binding domain CWR56_RS07425 PF02776 Thiamine pyrophosphate enzyme, N-terminal TPP binding domain CWR56_RS07425 PF00205 Thiamine pyrophosphate enzyme, central domain CWR56_RS07425 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CWR56_RS07430 PF05067 Manganese containing catalase CWR56_RS07435 PF03190 Protein of unknown function, DUF255 CWR56_RS07445 PF12146 Serine aminopeptidase, S33 CWR56_RS07450 PF01381 Helix-turn-helix CWR56_RS07460 PF06725 3D domain CWR56_RS07460 PF01476 LysM domain CWR56_RS07470 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CWR56_RS07470 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CWR56_RS07470 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CWR56_RS07470 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CWR56_RS07475 PF03631 Virulence factor BrkB CWR56_RS07480 PF18698 Histidine kinase sensor domain CWR56_RS07480 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS07480 PF00672 HAMP domain CWR56_RS07480 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS07480 PF00989 PAS fold CWR56_RS07485 PF03447 Homoserine dehydrogenase, NAD binding domain CWR56_RS07485 PF01842 ACT domain CWR56_RS07485 PF00742 Homoserine dehydrogenase CWR56_RS07495 PF00815 Histidinol dehydrogenase CWR56_RS07500 PF00561 alpha/beta hydrolase fold CWR56_RS07515 PF01869 BadF/BadG/BcrA/BcrD ATPase family CWR56_RS07525 PF00005 ABC transporter CWR56_RS07530 PF02653 Branched-chain amino acid transport system / permease component CWR56_RS07535 PF13407 Periplasmic binding protein domain CWR56_RS07540 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CWR56_RS07540 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CWR56_RS07550 PF03814 Potassium-transporting ATPase A subunit CWR56_RS07560 PF02669 K+-transporting ATPase, c chain CWR56_RS07565 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS07570 PF00132 Bacterial transferase hexapeptide (six repeats) CWR56_RS07580 PF00557 Metallopeptidase family M24 CWR56_RS07580 PF02810 SEC-C motif CWR56_RS07585 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CWR56_RS07590 PF01541 GIY-YIG catalytic domain CWR56_RS07595 PF08543 Phosphomethylpyrimidine kinase CWR56_RS07600 PF02110 Hydroxyethylthiazole kinase family CWR56_RS07605 PF02581 Thiamine monophosphate synthase CWR56_RS07610 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS07620 PF00005 ABC transporter CWR56_RS07620 PF13732 Domain of unknown function (DUF4162) CWR56_RS07630 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS07635 PF08402 TOBE domain CWR56_RS07635 PF00005 ABC transporter CWR56_RS07660 PF01979 Amidohydrolase family CWR56_RS07670 PF00005 ABC transporter CWR56_RS07675 PF12679 ABC-2 family transporter protein CWR56_RS07680 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS07680 PF00563 EAL domain CWR56_RS07680 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS07685 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS07690 PF00005 ABC transporter CWR56_RS07705 PF00924 Mechanosensitive ion channel CWR56_RS07705 PF05552 Conserved TM helix CWR56_RS07715 PF00258 Flavodoxin CWR56_RS07715 PF00753 Metallo-beta-lactamase superfamily CWR56_RS07720 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS07720 PF00072 Response regulator receiver domain CWR56_RS07725 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS07725 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS07730 PF07478 D-ala D-ala ligase C-terminus CWR56_RS07730 PF01820 D-ala D-ala ligase N-terminus CWR56_RS07735 PF02557 D-alanyl-D-alanine carboxypeptidase CWR56_RS07740 PF01757 Acyltransferase family CWR56_RS07740 PF01168 Alanine racemase, N-terminal domain CWR56_RS07740 PF00842 Alanine racemase, C-terminal domain CWR56_RS07755 PF00081 Iron/manganese superoxide dismutases, alpha-hairpin domain CWR56_RS07755 PF02777 Iron/manganese superoxide dismutases, C-terminal domain CWR56_RS07760 PF13537 Glutamine amidotransferase domain CWR56_RS07760 PF00733 Asparagine synthase CWR56_RS07765 PF13180 PDZ domain CWR56_RS07770 PF01797 Transposase IS200 like CWR56_RS07780 PF02342 TerD domain CWR56_RS07785 PF02342 TerD domain CWR56_RS07790 PF02342 TerD domain CWR56_RS07795 PF00689 Cation transporting ATPase, C-terminus CWR56_RS07795 PF00690 Cation transporter/ATPase, N-terminus CWR56_RS07800 PF14266 Putative component of 'biosynthetic module' CWR56_RS07805 PF05816 Toxic anion resistance protein (TelA) CWR56_RS07835 PF05684 Protein of unknown function (DUF819) CWR56_RS07840 PF01244 Membrane dipeptidase (Peptidase family M19) CWR56_RS07845 PF01032 FecCD transport family CWR56_RS07850 PF01032 FecCD transport family CWR56_RS07855 PF00005 ABC transporter CWR56_RS07865 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS07865 PF01590 GAF domain CWR56_RS07865 PF00360 Phytochrome region CWR56_RS07865 PF00563 EAL domain CWR56_RS07870 PF02342 TerD domain CWR56_RS07875 PF03180 NLPA lipoprotein CWR56_RS07880 PF03099 Biotin/lipoate A/B protein ligase family CWR56_RS07880 PF10437 Bacterial lipoate protein ligase C-terminus CWR56_RS07885 PF03553 Na+/H+ antiporter family CWR56_RS07900 PF02347 Glycine cleavage system P-protein CWR56_RS07905 PF02347 Glycine cleavage system P-protein CWR56_RS07915 PF06865 Pyrimidine/purine nucleoside phosphorylase CWR56_RS07920 PF01979 Amidohydrolase family CWR56_RS07935 PF07883 Cupin domain CWR56_RS07935 PF01381 Helix-turn-helix CWR56_RS07940 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS07945 PF03009 Glycerophosphoryl diester phosphodiesterase family CWR56_RS07950 PF12464 Maltose acetyltransferase CWR56_RS07950 PF14602 Hexapeptide repeat of succinyl-transferase CWR56_RS07965 PF00005 ABC transporter CWR56_RS07975 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS07975 PF00072 Response regulator receiver domain CWR56_RS07980 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS07980 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS08000 PF01638 HxlR-like helix-turn-helix CWR56_RS08005 PF01470 Pyroglutamyl peptidase CWR56_RS08035 PF08359 YsiA-like protein, C-terminal region CWR56_RS08035 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS08040 PF01156 Inosine-uridine preferring nucleoside hydrolase CWR56_RS08070 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS08070 PF00072 Response regulator receiver domain CWR56_RS08075 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS08075 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS08080 PF00085 Thioredoxin CWR56_RS08085 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS08090 PF01022 Bacterial regulatory protein, arsR family CWR56_RS08105 PF03600 Citrate transporter CWR56_RS08110 PF01235 Sodium:alanine symporter family CWR56_RS08115 PF00885 6,7-dimethyl-8-ribityllumazine synthase CWR56_RS08120 PF00925 GTP cyclohydrolase II CWR56_RS08120 PF00926 3,4-dihydroxy-2-butanone 4-phosphate synthase CWR56_RS08125 PF00677 Lumazine binding domain CWR56_RS08130 PF01872 RibD C-terminal domain CWR56_RS08130 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CWR56_RS08135 PF09382 RQC domain CWR56_RS08135 PF16124 RecQ zinc-binding CWR56_RS08135 PF00570 HRDC domain CWR56_RS08135 PF00271 Helicase conserved C-terminal domain CWR56_RS08135 PF00270 DEAD/DEAH box helicase CWR56_RS08140 PF01964 Radical SAM ThiC family CWR56_RS08150 PF00581 Rhodanese-like domain CWR56_RS08150 PF00899 ThiF family CWR56_RS08155 PF05690 Thiazole biosynthesis protein ThiG CWR56_RS08160 PF06968 Biotin and Thiamin Synthesis associated domain CWR56_RS08160 PF04055 Radical SAM superfamily CWR56_RS08170 PF03606 C4-dicarboxylate anaerobic carrier CWR56_RS08180 PF12804 MobA-like NTP transferase domain CWR56_RS08190 PF01906 Putative heavy-metal-binding CWR56_RS08195 PF00994 Probable molybdopterin binding domain CWR56_RS08200 PF06463 Molybdenum Cofactor Synthesis C CWR56_RS08200 PF04055 Radical SAM superfamily CWR56_RS08205 PF01967 MoaC family CWR56_RS08245 PF01553 Acyltransferase CWR56_RS08280 PF02690 Na+/Pi-cotransporter CWR56_RS08295 PF10609 NUBPL iron-transfer P-loop NTPase CWR56_RS08305 PF02310 B12 binding domain CWR56_RS08305 PF02607 B12 binding domain CWR56_RS08310 PF01208 Uroporphyrinogen decarboxylase (URO-D) CWR56_RS08320 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS08325 PF01381 Helix-turn-helix CWR56_RS08325 PF07883 Cupin domain CWR56_RS08330 PF02447 GntP family permease CWR56_RS08335 PF13426 PAS domain CWR56_RS08335 PF00989 PAS fold CWR56_RS08335 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS08335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS08335 PF13188 PAS domain CWR56_RS08340 PF02954 Bacterial regulatory protein, Fis family CWR56_RS08340 PF00158 Sigma-54 interaction domain CWR56_RS08340 PF00072 Response regulator receiver domain CWR56_RS08345 PF09338 Glycine/sarcosine/betaine reductase component B subunits CWR56_RS08355 PF04397 LytTr DNA-binding domain CWR56_RS08355 PF00072 Response regulator receiver domain CWR56_RS08380 PF03616 Sodium/glutamate symporter CWR56_RS08385 PF00962 Adenosine/AMP deaminase CWR56_RS08390 PF12787 EcsC protein family CWR56_RS08395 PF06050 2-hydroxyglutaryl-CoA dehydratase, D-component CWR56_RS08400 PF01869 BadF/BadG/BcrA/BcrD ATPase family CWR56_RS08405 PF04122 Putative cell wall binding repeat 2 CWR56_RS08405 PF08486 Stage II sporulation protein CWR56_RS08415 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS08420 PF00005 ABC transporter CWR56_RS08440 PF01327 Polypeptide deformylase CWR56_RS08465 PF02567 Phenazine biosynthesis-like protein CWR56_RS08470 PF11208 Protein of unknown function (DUF2992) CWR56_RS08475 PF06961 Protein of unknown function (DUF1294) CWR56_RS08490 PF00293 NUDIX domain CWR56_RS08500 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CWR56_RS08500 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CWR56_RS08515 PF01869 BadF/BadG/BcrA/BcrD ATPase family CWR56_RS08540 PF00497 Bacterial extracellular solute-binding proteins, family 3 CWR56_RS08545 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS08550 PF00005 ABC transporter CWR56_RS08555 PF03960 ArsC family CWR56_RS08565 PF02540 NAD synthase CWR56_RS08570 PF02926 THUMP domain CWR56_RS08570 PF01170 Putative RNA methylase family UPF0020 CWR56_RS08580 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS08580 PF00072 Response regulator receiver domain CWR56_RS08585 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS08585 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS08585 PF00672 HAMP domain CWR56_RS08590 PF01416 tRNA pseudouridine synthase CWR56_RS08595 PF00764 Arginosuccinate synthase CWR56_RS08605 PF13411 MerR HTH family regulatory protein CWR56_RS08605 PF07739 TipAS antibiotic-recognition domain CWR56_RS08615 PF04239 Protein of unknown function (DUF421) CWR56_RS08630 PF01370 NAD dependent epimerase/dehydratase family CWR56_RS08650 PF13187 4Fe-4S dicluster domain CWR56_RS08650 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CWR56_RS08650 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CWR56_RS08655 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS08655 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CWR56_RS08660 PF03466 LysR substrate binding domain CWR56_RS08660 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS08665 PF02342 TerD domain CWR56_RS08670 PF02342 TerD domain CWR56_RS08675 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CWR56_RS08675 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CWR56_RS08690 PF13407 Periplasmic binding protein domain CWR56_RS08690 PF00356 Bacterial regulatory proteins, lacI family CWR56_RS08700 PF00251 Glycosyl hydrolases family 32 N-terminal domain CWR56_RS08700 PF08244 Glycosyl hydrolases family 32 C terminal CWR56_RS08705 PF00294 pfkB family carbohydrate kinase CWR56_RS08720 PF07690 Major Facilitator Superfamily CWR56_RS08725 PF07690 Major Facilitator Superfamily CWR56_RS08750 PF00300 Histidine phosphatase superfamily (branch 1) CWR56_RS08760 PF02224 Cytidylate kinase CWR56_RS08765 PF01553 Acyltransferase CWR56_RS08770 PF02401 LytB protein CWR56_RS08780 PF01979 Amidohydrolase family CWR56_RS08780 PF13382 Adenine deaminase C-terminal domain CWR56_RS08785 PF00578 AhpC/TSA family CWR56_RS08790 PF03883 Peroxide stress protein YaaA CWR56_RS08795 PF00689 Cation transporting ATPase, C-terminus CWR56_RS08795 PF00690 Cation transporter/ATPase, N-terminus CWR56_RS08800 PF01053 Cys/Met metabolism PLP-dependent enzyme CWR56_RS08805 PF04204 Homoserine O-succinyltransferase CWR56_RS08810 PF01047 MarR family CWR56_RS08815 PF06480 FtsH Extracellular CWR56_RS08815 PF01434 Peptidase family M41 CWR56_RS08815 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS08815 PF17862 AAA+ lid domain CWR56_RS08820 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS08820 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS08820 PF02702 Osmosensitive K+ channel His kinase sensor domain CWR56_RS08820 PF13493 Domain of unknown function (DUF4118) CWR56_RS08825 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS08825 PF00072 Response regulator receiver domain CWR56_RS08830 PF01544 CorA-like Mg2+ transporter protein CWR56_RS08840 PF00793 DAHP synthetase I family CWR56_RS08840 PF18152 DAHP synthase ferredoxin-like domain CWR56_RS08845 PF01761 3-dehydroquinate synthase CWR56_RS08850 PF00275 EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) CWR56_RS08855 PF01264 Chorismate synthase CWR56_RS08860 PF01817 Chorismate mutase type II CWR56_RS08860 PF00800 Prephenate dehydratase CWR56_RS08865 PF08501 Shikimate dehydrogenase substrate binding domain CWR56_RS08870 PF01202 Shikimate kinase CWR56_RS08875 PF02153 Prephenate dehydrogenase CWR56_RS08880 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS08880 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS08880 PF00563 EAL domain CWR56_RS08885 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS08885 PF17158 Membrane-associated sensor, integral membrane domain CWR56_RS08920 PF06445 GyrI-like small molecule binding domain CWR56_RS08920 PF12833 Helix-turn-helix domain CWR56_RS08950 PF00005 ABC transporter CWR56_RS08965 PF08241 Methyltransferase domain CWR56_RS08970 PF04073 Aminoacyl-tRNA editing domain CWR56_RS08995 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS09000 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CWR56_RS09030 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS09040 PF00239 Resolvase, N terminal domain CWR56_RS09040 PF02796 Helix-turn-helix domain of resolvase CWR56_RS09050 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS09055 PF00936 BMC domain CWR56_RS09060 PF10662 Ethanolamine utilisation - propanediol utilisation CWR56_RS09065 PF03861 ANTAR domain CWR56_RS09065 PF00072 Response regulator receiver domain CWR56_RS09070 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS09070 PF12282 Signal transduction histidine kinase CWR56_RS09070 PF07568 Histidine kinase CWR56_RS09075 PF06277 Ethanolamine utilisation protein EutA CWR56_RS09080 PF06751 Ethanolamine ammonia lyase large subunit (EutB) CWR56_RS09085 PF05985 Ethanolamine ammonia-lyase light chain (EutC) CWR56_RS09090 PF00936 BMC domain CWR56_RS09095 PF00936 BMC domain CWR56_RS09100 PF00171 Aldehyde dehydrogenase family CWR56_RS09100 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS09105 PF00936 BMC domain CWR56_RS09115 PF06130 Phosphate propanoyltransferase CWR56_RS09125 PF03319 Ethanolamine utilisation protein EutN/carboxysome CWR56_RS09135 PF04346 Ethanolamine utilisation protein, EutH CWR56_RS09140 PF06249 Ethanolamine utilisation protein EutQ CWR56_RS09150 PF07687 Peptidase dimerisation domain CWR56_RS09150 PF01546 Peptidase family M20/M25/M40 CWR56_RS09155 PF03806 AbgT putative transporter family CWR56_RS09160 PF00155 Aminotransferase class I and II CWR56_RS09165 PF00005 ABC transporter CWR56_RS09185 PF01726 LexA DNA binding domain CWR56_RS09185 PF00717 Peptidase S24-like CWR56_RS09190 PF02899 Phage integrase, N-terminal SAM-like domain CWR56_RS09190 PF00589 Phage integrase family CWR56_RS09205 PF04232 Stage V sporulation protein S (SpoVS) CWR56_RS09210 PF03255 Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit CWR56_RS09215 PF01039 Carboxyl transferase domain CWR56_RS09215 PF17848 Acetyl-coA carboxylase zinc finger domain CWR56_RS09220 PF02785 Biotin carboxylase C-terminal domain CWR56_RS09220 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CWR56_RS09220 PF00289 Biotin carboxylase, N-terminal domain CWR56_RS09225 PF00364 Biotin-requiring enzyme CWR56_RS09245 PF02390 Putative methyltransferase CWR56_RS09270 PF00005 ABC transporter CWR56_RS09280 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS09280 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS09285 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CWR56_RS09285 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CWR56_RS09290 PF13302 Acetyltransferase (GNAT) domain CWR56_RS09295 PF03466 LysR substrate binding domain CWR56_RS09295 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS09310 PF00005 ABC transporter CWR56_RS09315 PF07689 KaiB domain CWR56_RS09315 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS09315 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS09320 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS09320 PF00072 Response regulator receiver domain CWR56_RS09325 PF13486 Reductive dehalogenase subunit CWR56_RS09325 PF12838 4Fe-4S dicluster domain CWR56_RS09330 PF00072 Response regulator receiver domain CWR56_RS09330 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS09335 PF00989 PAS fold CWR56_RS09335 PF16736 Single Cache-like CWR56_RS09335 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS09335 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS09340 PF12704 MacB-like periplasmic core domain CWR56_RS09340 PF02687 FtsX-like permease family CWR56_RS09340 PF00005 ABC transporter CWR56_RS09375 PF04474 Protein of unknown function (DUF554) CWR56_RS09380 PF04073 Aminoacyl-tRNA editing domain CWR56_RS09395 PF01546 Peptidase family M20/M25/M40 CWR56_RS09400 PF06838 Methionine gamma-lyase CWR56_RS09405 PF17209 Hfq protein CWR56_RS09415 PF08676 MutL C terminal dimerisation domain CWR56_RS09415 PF01119 DNA mismatch repair protein, C-terminal domain CWR56_RS09420 PF01624 MutS domain I CWR56_RS09420 PF05188 MutS domain II CWR56_RS09420 PF05192 MutS domain III CWR56_RS09420 PF05190 MutS family domain IV CWR56_RS09420 PF00488 MutS domain V CWR56_RS09425 PF00005 ABC transporter CWR56_RS09430 PF09084 NMT1/THI5 like CWR56_RS09435 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS09450 PF01638 HxlR-like helix-turn-helix CWR56_RS09460 PF00293 NUDIX domain CWR56_RS09470 PF01938 TRAM domain CWR56_RS09470 PF00919 Uncharacterized protein family UPF0004 CWR56_RS09470 PF04055 Radical SAM superfamily CWR56_RS09475 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS09475 PF04122 Putative cell wall binding repeat 2 CWR56_RS09485 PF17099 Tryptophan transporter TrpP CWR56_RS09510 PF00313 'Cold-shock' DNA-binding domain CWR56_RS09530 PF02627 Carboxymuconolactone decarboxylase family CWR56_RS09550 PF01925 Sulfite exporter TauE/SafE CWR56_RS09555 PF12833 Helix-turn-helix domain CWR56_RS09570 PF12146 Serine aminopeptidase, S33 CWR56_RS09575 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS09585 PF00258 Flavodoxin CWR56_RS09590 PF00082 Subtilase family CWR56_RS09595 PF00561 alpha/beta hydrolase fold CWR56_RS09600 PF18665 Tetracyclin repressor-like, C-terminal domain CWR56_RS09600 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS09610 PF00920 Dehydratase family CWR56_RS09620 PF04892 VanZ like family CWR56_RS09640 PF12833 Helix-turn-helix domain CWR56_RS09645 PF07690 Major Facilitator Superfamily CWR56_RS09650 PF10431 C-terminal, D2-small domain, of ClpB protein CWR56_RS09650 PF02861 Clp amino terminal domain, pathogenicity island component CWR56_RS09650 PF17871 AAA lid domain CWR56_RS09650 PF07724 AAA domain (Cdc48 subfamily) CWR56_RS09650 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS09665 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS09670 PF00005 ABC transporter CWR56_RS09685 PF01546 Peptidase family M20/M25/M40 CWR56_RS09685 PF07687 Peptidase dimerisation domain CWR56_RS09690 PF01177 Asp/Glu/Hydantoin racemase CWR56_RS09700 PF02729 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain CWR56_RS09700 PF00185 Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain CWR56_RS09705 PF00202 Aminotransferase class-III CWR56_RS09710 PF00696 Amino acid kinase family CWR56_RS09715 PF01960 ArgJ family CWR56_RS09720 PF02774 Semialdehyde dehydrogenase, dimerisation domain CWR56_RS09720 PF01118 Semialdehyde dehydrogenase, NAD binding domain CWR56_RS09770 PF13305 Tetracyclin repressor-like, C-terminal domain CWR56_RS09770 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS09795 PF13443 Cro/C1-type HTH DNA-binding domain CWR56_RS09810 PF01380 SIS domain CWR56_RS09810 PF01418 Helix-turn-helix domain, rpiR family CWR56_RS09815 PF06962 Putative rRNA methylase CWR56_RS09820 PF00849 RNA pseudouridylate synthase CWR56_RS09820 PF01479 S4 domain CWR56_RS09825 PF01594 AI-2E family transporter CWR56_RS09835 PF02784 Pyridoxal-dependent decarboxylase, pyridoxal binding domain CWR56_RS09835 PF00278 Pyridoxal-dependent decarboxylase, C-terminal sheet domain CWR56_RS09840 PF00696 Amino acid kinase family CWR56_RS09840 PF01842 ACT domain CWR56_RS09840 PF13840 ACT domain CWR56_RS09870 PF00749 tRNA synthetases class I (E and Q), catalytic domain CWR56_RS09870 PF03950 tRNA synthetases class I (E and Q), anti-codon binding domain CWR56_RS09875 PF00781 Diacylglycerol kinase catalytic domain CWR56_RS09905 PF14659 Phage integrase, N-terminal SAM-like domain CWR56_RS09905 PF00589 Phage integrase family CWR56_RS09915 PF00005 ABC transporter CWR56_RS09915 PF12848 ABC transporter CWR56_RS09940 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CWR56_RS09940 PF01799 [2Fe-2S] binding domain CWR56_RS09940 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CWR56_RS09950 PF00860 Permease family CWR56_RS09965 PF01180 Dihydroorotate dehydrogenase CWR56_RS09970 PF01979 Amidohydrolase family CWR56_RS09975 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CWR56_RS09975 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CWR56_RS09985 PF01799 [2Fe-2S] binding domain CWR56_RS09985 PF00111 2Fe-2S iron-sulfur cluster binding domain CWR56_RS09990 PF01979 Amidohydrolase family CWR56_RS09995 PF01979 Amidohydrolase family CWR56_RS10000 PF01546 Peptidase family M20/M25/M40 CWR56_RS10000 PF07687 Peptidase dimerisation domain CWR56_RS10005 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS10015 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CWR56_RS10015 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CWR56_RS10020 PF00111 2Fe-2S iron-sulfur cluster binding domain CWR56_RS10020 PF01799 [2Fe-2S] binding domain CWR56_RS10025 PF01979 Amidohydrolase family CWR56_RS10030 PF00860 Permease family CWR56_RS10035 PF00860 Permease family CWR56_RS10040 PF02954 Bacterial regulatory protein, Fis family CWR56_RS10040 PF00158 Sigma-54 interaction domain CWR56_RS10040 PF13188 PAS domain CWR56_RS10050 PF07728 AAA domain (dynein-related subfamily) CWR56_RS10050 PF12102 Domain of unknown function (DUF3578) CWR56_RS10065 PF06177 QueT transporter CWR56_RS10075 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CWR56_RS10075 PF01799 [2Fe-2S] binding domain CWR56_RS10075 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CWR56_RS10080 PF00111 2Fe-2S iron-sulfur cluster binding domain CWR56_RS10080 PF01799 [2Fe-2S] binding domain CWR56_RS10090 PF00999 Sodium/hydrogen exchanger family CWR56_RS10110 PF00005 ABC transporter CWR56_RS10115 PF00270 DEAD/DEAH box helicase CWR56_RS10115 PF00271 Helicase conserved C-terminal domain CWR56_RS10120 PF00860 Permease family CWR56_RS10125 PF01554 MatE CWR56_RS10135 PF00923 Transaldolase/Fructose-6-phosphate aldolase CWR56_RS10140 PF08220 DeoR-like helix-turn-helix domain CWR56_RS10140 PF00455 DeoR C terminal sensor domain CWR56_RS10150 PF13426 PAS domain CWR56_RS10150 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS10150 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS10150 PF00672 HAMP domain CWR56_RS10155 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS10155 PF00072 Response regulator receiver domain CWR56_RS10160 PF00403 Heavy-metal-associated domain CWR56_RS10175 PF14492 Elongation Factor G, domain II CWR56_RS10175 PF00679 Elongation factor G C-terminus CWR56_RS10175 PF00009 Elongation factor Tu GTP binding domain CWR56_RS10175 PF03144 Elongation factor Tu domain 2 CWR56_RS10180 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS10185 PF14821 Threonine synthase N terminus CWR56_RS10185 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS10190 PF08544 GHMP kinases C terminal CWR56_RS10190 PF00288 GHMP kinases N terminal domain CWR56_RS10220 PF00583 Acetyltransferase (GNAT) family CWR56_RS10245 PF04551 GcpE protein CWR56_RS10250 PF17820 PDZ domain CWR56_RS10250 PF02163 Peptidase family M50 CWR56_RS10255 PF08436 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal domain CWR56_RS10255 PF13288 DXP reductoisomerase C-terminal domain CWR56_RS10255 PF02670 1-deoxy-D-xylulose 5-phosphate reductoisomerase CWR56_RS10270 PF00563 EAL domain CWR56_RS10270 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS10270 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS10285 PF01255 Putative undecaprenyl diphosphate synthase CWR56_RS10295 PF01765 Ribosome recycling factor CWR56_RS10300 PF00696 Amino acid kinase family CWR56_RS10305 PF00889 Elongation factor TS CWR56_RS10310 PF00318 Ribosomal protein S2 CWR56_RS10315 PF07943 Penicillin-binding protein 5, C-terminal domain CWR56_RS10315 PF00768 D-alanyl-D-alanine carboxypeptidase CWR56_RS10330 PF02659 Putative manganese efflux pump CWR56_RS10335 PF00488 MutS domain V CWR56_RS10335 PF01713 Smr domain CWR56_RS10340 PF01139 tRNA-splicing ligase RtcB CWR56_RS10350 PF04294 VanW like protein CWR56_RS10370 PF05343 M42 glutamyl aminopeptidase CWR56_RS10380 PF01926 50S ribosome-binding GTPase CWR56_RS10380 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CWR56_RS10385 PF04055 Radical SAM superfamily CWR56_RS10385 PF06968 Biotin and Thiamin Synthesis associated domain CWR56_RS10400 PF00202 Aminotransferase class-III CWR56_RS10410 PF04892 VanZ like family CWR56_RS10425 PF07973 Threonyl and Alanyl tRNA synthetase second additional domain CWR56_RS10425 PF01411 tRNA synthetases class II (A) CWR56_RS10425 PF02272 DHHA1 domain CWR56_RS10435 PF02866 lactate/malate dehydrogenase, alpha/beta C-terminal domain CWR56_RS10435 PF00056 lactate/malate dehydrogenase, NAD binding domain CWR56_RS10445 PF01641 SelR domain CWR56_RS10445 PF01625 Peptide methionine sulfoxide reductase CWR56_RS10450 PF01734 Patatin-like phospholipase CWR56_RS10455 PF03063 Prismane/CO dehydrogenase family CWR56_RS10475 PF00375 Sodium:dicarboxylate symporter family CWR56_RS10480 PF00005 ABC transporter CWR56_RS10485 PF01546 Peptidase family M20/M25/M40 CWR56_RS10485 PF07687 Peptidase dimerisation domain CWR56_RS10490 PF00497 Bacterial extracellular solute-binding proteins, family 3 CWR56_RS10495 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS10500 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS10505 PF00497 Bacterial extracellular solute-binding proteins, family 3 CWR56_RS10510 PF13247 4Fe-4S dicluster domain CWR56_RS10510 PF12800 4Fe-4S binding domain CWR56_RS10515 PF00384 Molybdopterin oxidoreductase CWR56_RS10515 PF04879 Molybdopterin oxidoreductase Fe4S4 domain CWR56_RS10515 PF01568 Molydopterin dinucleotide binding domain CWR56_RS10520 PF00176 SNF2 family N-terminal domain CWR56_RS10520 PF04434 SWIM zinc finger CWR56_RS10520 PF00271 Helicase conserved C-terminal domain CWR56_RS10525 PF00561 alpha/beta hydrolase fold CWR56_RS10535 PF03880 DbpA RNA binding domain CWR56_RS10535 PF00270 DEAD/DEAH box helicase CWR56_RS10535 PF00271 Helicase conserved C-terminal domain CWR56_RS10555 PF01832 Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase CWR56_RS10555 PF13457 GW (Gly-Tryp) dipeptide domain CWR56_RS10560 PF03636 Glycosyl hydrolase family 65, N-terminal domain CWR56_RS10560 PF03633 Glycosyl hydrolase family 65, C-terminal domain CWR56_RS10560 PF03632 Glycosyl hydrolase family 65 central catalytic domain CWR56_RS10565 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS10570 PF16657 Maltogenic Amylase, C-terminal domain CWR56_RS10570 PF00128 Alpha amylase, catalytic domain CWR56_RS10570 PF02903 Alpha amylase, N-terminal ig-like domain CWR56_RS10575 PF02811 PHP domain CWR56_RS10585 PF04122 Putative cell wall binding repeat 2 CWR56_RS10585 PF08486 Stage II sporulation protein CWR56_RS10590 PF00480 ROK family CWR56_RS10595 PF00210 Ferritin-like domain CWR56_RS10600 PF13607 Succinyl-CoA ligase like flavodoxin domain CWR56_RS10600 PF13380 CoA binding domain CWR56_RS10615 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CWR56_RS10615 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CWR56_RS10615 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CWR56_RS10625 PF00155 Aminotransferase class I and II CWR56_RS10640 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS10645 PF00756 Putative esterase CWR56_RS10650 PF01594 AI-2E family transporter CWR56_RS10655 PF00171 Aldehyde dehydrogenase family CWR56_RS10670 PF01926 50S ribosome-binding GTPase CWR56_RS10670 PF16360 GTP-binding GTPase Middle Region CWR56_RS10670 PF13167 GTP-binding GTPase N-terminal CWR56_RS10675 PF00005 ABC transporter CWR56_RS10675 PF00664 ABC transporter transmembrane region CWR56_RS10680 PF00005 ABC transporter CWR56_RS10680 PF00664 ABC transporter transmembrane region CWR56_RS10695 PF00484 Carbonic anhydrase CWR56_RS10715 PF01487 Type I 3-dehydroquinase CWR56_RS10765 PF02920 DNA binding domain of tn916 integrase CWR56_RS10765 PF00589 Phage integrase family CWR56_RS10770 PF00132 Bacterial transferase hexapeptide (six repeats) CWR56_RS10775 PF04055 Radical SAM superfamily CWR56_RS10775 PF01938 TRAM domain CWR56_RS10775 PF00919 Uncharacterized protein family UPF0004 CWR56_RS10790 PF01226 Formate/nitrite transporter CWR56_RS10795 PF01077 Nitrite and sulphite reductase 4Fe-4S domain CWR56_RS10795 PF03460 Nitrite/Sulfite reductase ferredoxin-like half domain CWR56_RS10795 PF13187 4Fe-4S dicluster domain CWR56_RS10800 PF10418 Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B CWR56_RS10800 PF00175 Oxidoreductase NAD-binding domain CWR56_RS10805 PF17179 4Fe-4S dicluster domain CWR56_RS10810 PF00027 Cyclic nucleotide-binding domain CWR56_RS10810 PF13545 Crp-like helix-turn-helix domain CWR56_RS10815 PF01380 SIS domain CWR56_RS10815 PF01418 Helix-turn-helix domain, rpiR family CWR56_RS10820 PF00480 ROK family CWR56_RS10835 PF00474 Sodium:solute symporter family CWR56_RS10840 PF00701 Dihydrodipicolinate synthetase family CWR56_RS10845 PF04131 Putative N-acetylmannosamine-6-phosphate epimerase CWR56_RS10860 PF00360 Phytochrome region CWR56_RS10860 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS10860 PF01590 GAF domain CWR56_RS10860 PF00563 EAL domain CWR56_RS10865 PF01336 OB-fold nucleic acid binding domain CWR56_RS10865 PF00152 tRNA synthetases class II (D, K and N) CWR56_RS10875 PF00082 Subtilase family CWR56_RS10875 PF02225 PA domain CWR56_RS10875 PF05922 Peptidase inhibitor I9 CWR56_RS10875 PF13860 FlgD Ig-like domain CWR56_RS10880 PF00082 Subtilase family CWR56_RS10890 PF17862 AAA+ lid domain CWR56_RS10890 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS10890 PF06480 FtsH Extracellular CWR56_RS10890 PF01434 Peptidase family M41 CWR56_RS10895 PF00589 Phage integrase family CWR56_RS10895 PF02920 DNA binding domain of tn916 integrase CWR56_RS10900 PF09035 Excisionase from transposon Tn916 CWR56_RS10935 PF08361 MAATS-type transcriptional repressor, C-terminal region CWR56_RS10935 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS10940 PF01545 Cation efflux family CWR56_RS10940 PF16916 Dimerisation domain of Zinc Transporter CWR56_RS10955 PF00005 ABC transporter CWR56_RS10985 PF06445 GyrI-like small molecule binding domain CWR56_RS10985 PF12833 Helix-turn-helix domain CWR56_RS10995 PF13302 Acetyltransferase (GNAT) domain CWR56_RS11000 PF01980 tRNA-methyltransferase O CWR56_RS11000 PF18389 TrmO C-terminal domain CWR56_RS11005 PF09278 MerR, DNA binding CWR56_RS11005 PF00376 MerR family regulatory protein CWR56_RS11020 PF04892 VanZ like family CWR56_RS11030 PF07690 Major Facilitator Superfamily CWR56_RS11035 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CWR56_RS11035 PF00391 PEP-utilising enzyme, mobile domain CWR56_RS11040 PF17932 Tetracyclin repressor-like, C-terminal domain CWR56_RS11040 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS11050 PF00877 NlpC/P60 family CWR56_RS11095 PF01348 Type II intron maturase CWR56_RS11095 PF00078 Reverse transcriptase (RNA-dependent DNA polymerase) CWR56_RS11105 PF02486 Replication initiation factor CWR56_RS11105 PF18106 Rolling Circle replication initiation protein N-terminal domain CWR56_RS11170 PF04055 Radical SAM superfamily CWR56_RS11170 PF12544 Lysine-2,3-aminomutase CWR56_RS11175 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS11175 PF00155 Aminotransferase class I and II CWR56_RS11180 PF01177 Asp/Glu/Hydantoin racemase CWR56_RS11200 PF07883 Cupin domain CWR56_RS11205 PF00854 POT family CWR56_RS11210 PF00557 Metallopeptidase family M24 CWR56_RS11210 PF01321 Creatinase/Prolidase N-terminal domain CWR56_RS11215 PF00854 POT family CWR56_RS11235 PF00355 Rieske [2Fe-2S] domain CWR56_RS11235 PF01266 FAD dependent oxidoreductase CWR56_RS11240 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS11240 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS11245 PF00294 pfkB family carbohydrate kinase CWR56_RS11250 PF08279 HTH domain CWR56_RS11250 PF00874 PRD domain CWR56_RS11250 PF05043 Mga helix-turn-helix domain CWR56_RS11250 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS11255 PF13350 Tyrosine phosphatase family CWR56_RS11260 PF01594 AI-2E family transporter CWR56_RS11270 PF01131 DNA topoisomerase CWR56_RS11270 PF01751 Toprim domain CWR56_RS11275 PF01235 Sodium:alanine symporter family CWR56_RS11280 PF00596 Class II Aldolase and Adducin N-terminal domain CWR56_RS11285 PF00596 Class II Aldolase and Adducin N-terminal domain CWR56_RS11290 PF00107 Zinc-binding dehydrogenase CWR56_RS11290 PF08240 Alcohol dehydrogenase GroES-like domain CWR56_RS11295 PF03611 PTS system sugar-specific permease component CWR56_RS11300 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS11305 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS11305 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS11305 PF02378 Phosphotransferase system, EIIC CWR56_RS11310 PF00158 Sigma-54 interaction domain CWR56_RS11310 PF00874 PRD domain CWR56_RS11310 PF03610 PTS system fructose IIA component CWR56_RS11330 PF00155 Aminotransferase class I and II CWR56_RS11330 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS11335 PF03591 AzlC protein CWR56_RS11345 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS11345 PF00989 PAS fold CWR56_RS11345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS11345 PF16736 Single Cache-like CWR56_RS11355 PF00072 Response regulator receiver domain CWR56_RS11355 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS11405 PF02498 BRO family, N-terminal domain CWR56_RS11405 PF10548 P22AR C-terminal domain CWR56_RS11470 PF01381 Helix-turn-helix CWR56_RS11480 PF00313 'Cold-shock' DNA-binding domain CWR56_RS11490 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS11495 PF00005 ABC transporter CWR56_RS11495 PF08402 TOBE domain CWR56_RS11510 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS11510 PF00072 Response regulator receiver domain CWR56_RS11515 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS11515 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS11520 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CWR56_RS11520 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CWR56_RS11520 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CWR56_RS11520 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CWR56_RS11525 PF00834 Ribulose-phosphate 3 epimerase family CWR56_RS11530 PF02502 Ribose/Galactose Isomerase CWR56_RS11535 PF02779 Transketolase, pyrimidine binding domain CWR56_RS11535 PF02780 Transketolase, C-terminal domain CWR56_RS11540 PF00456 Transketolase, thiamine diphosphate binding domain CWR56_RS11545 PF08240 Alcohol dehydrogenase GroES-like domain CWR56_RS11545 PF00107 Zinc-binding dehydrogenase CWR56_RS11550 PF08240 Alcohol dehydrogenase GroES-like domain CWR56_RS11550 PF00107 Zinc-binding dehydrogenase CWR56_RS11555 PF03611 PTS system sugar-specific permease component CWR56_RS11560 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS11570 PF00158 Sigma-54 interaction domain CWR56_RS11570 PF00874 PRD domain CWR56_RS11570 PF03610 PTS system fructose IIA component CWR56_RS11575 PF00923 Transaldolase/Fructose-6-phosphate aldolase CWR56_RS11580 PF00156 Phosphoribosyl transferase domain CWR56_RS11585 PF01232 Mannitol dehydrogenase Rossmann domain CWR56_RS11585 PF08125 Mannitol dehydrogenase C-terminal domain CWR56_RS11590 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS11595 PF00874 PRD domain CWR56_RS11595 PF08279 HTH domain CWR56_RS11595 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS11595 PF05043 Mga helix-turn-helix domain CWR56_RS11595 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS11600 PF02378 Phosphotransferase system, EIIC CWR56_RS11600 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS11605 PF00478 IMP dehydrogenase / GMP reductase domain CWR56_RS11605 PF00571 CBS domain CWR56_RS11610 PF05816 Toxic anion resistance protein (TelA) CWR56_RS11620 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS11625 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CWR56_RS11625 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CWR56_RS11635 PF11794 4-hydroxyphenylacetate 3-hydroxylase N terminal CWR56_RS11635 PF03241 4-hydroxyphenylacetate 3-hydroxylase C terminal CWR56_RS11640 PF00171 Aldehyde dehydrogenase family CWR56_RS11645 PF13336 Acetyl-CoA hydrolase/transferase C-terminal domain CWR56_RS11645 PF02550 Acetyl-CoA hydrolase/transferase N-terminal domain CWR56_RS11650 PF02080 TrkA-C domain CWR56_RS11650 PF06826 Predicted Permease Membrane Region CWR56_RS11650 PF06826 Predicted Permease Membrane Region CWR56_RS11650 PF02080 TrkA-C domain CWR56_RS11655 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS11655 PF03466 LysR substrate binding domain CWR56_RS11665 PF01321 Creatinase/Prolidase N-terminal domain CWR56_RS11665 PF00557 Metallopeptidase family M24 CWR56_RS11670 PF02504 Fatty acid synthesis protein CWR56_RS11675 PF08545 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CWR56_RS11690 PF09338 Glycine/sarcosine/betaine reductase component B subunits CWR56_RS11695 PF00085 Thioredoxin CWR56_RS11700 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS11730 PF00005 ABC transporter CWR56_RS11740 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS11780 PF02749 Quinolinate phosphoribosyl transferase, N-terminal domain CWR56_RS11780 PF01729 Quinolinate phosphoribosyl transferase, C-terminal domain CWR56_RS11785 PF00890 FAD binding domain CWR56_RS11790 PF02445 Quinolinate synthetase A protein CWR56_RS11795 PF02554 Carbon starvation protein CstA CWR56_RS11810 PF01594 AI-2E family transporter CWR56_RS11815 PF00293 NUDIX domain CWR56_RS11830 PF02920 DNA binding domain of tn916 integrase CWR56_RS11830 PF00589 Phage integrase family CWR56_RS11835 PF09035 Excisionase from transposon Tn916 CWR56_RS11875 PF06308 23S rRNA methylastransferase leader peptide (ErmCL) CWR56_RS11880 PF00398 Ribosomal RNA adenine dimethylase CWR56_RS11910 PF00877 NlpC/P60 family CWR56_RS11960 PF02486 Replication initiation factor CWR56_RS11960 PF18106 Rolling Circle replication initiation protein N-terminal domain CWR56_RS11975 PF01381 Helix-turn-helix CWR56_RS12000 PF00871 Acetokinase family CWR56_RS12020 PF02954 Bacterial regulatory protein, Fis family CWR56_RS12020 PF13426 PAS domain CWR56_RS12020 PF00158 Sigma-54 interaction domain CWR56_RS12025 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS12030 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS12045 PF01070 FMN-dependent dehydrogenase CWR56_RS12050 PF08291 Peptidase M15 CWR56_RS12050 PF01471 Putative peptidoglycan binding domain CWR56_RS12055 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS12055 PF05569 BlaR1 peptidase M56 CWR56_RS12060 PF03965 Penicillinase repressor CWR56_RS12075 PF03147 Ferredoxin-fold anticodon binding domain CWR56_RS12075 PF01588 Putative tRNA binding domain CWR56_RS12075 PF03483 B3/4 domain CWR56_RS12075 PF17759 Phenylalanyl tRNA synthetase beta chain CLM domain CWR56_RS12075 PF03484 tRNA synthetase B5 domain CWR56_RS12080 PF00912 Transglycosylase CWR56_RS12085 PF00929 Exonuclease CWR56_RS12085 PF14579 Helix-hairpin-helix motif CWR56_RS12085 PF07733 Bacterial DNA polymerase III alpha NTPase domain CWR56_RS12085 PF02811 PHP domain CWR56_RS12085 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CWR56_RS12105 PF01171 PP-loop family CWR56_RS12120 PF05067 Manganese containing catalase CWR56_RS12125 PF08239 Bacterial SH3 domain CWR56_RS12125 PF00877 NlpC/P60 family CWR56_RS12125 PF01476 LysM domain CWR56_RS12130 PF00692 dUTPase CWR56_RS12135 PF01751 Toprim domain CWR56_RS12135 PF01131 DNA topoisomerase CWR56_RS12150 PF00873 AcrB/AcrD/AcrF family CWR56_RS12165 PF01326 Pyruvate phosphate dikinase, PEP/pyruvate binding domain CWR56_RS12165 PF00391 PEP-utilising enzyme, mobile domain CWR56_RS12165 PF02896 PEP-utilising enzyme, TIM barrel domain CWR56_RS12170 PF03618 Kinase/pyrophosphorylase CWR56_RS12175 PF08279 HTH domain CWR56_RS12175 PF00571 CBS domain CWR56_RS12195 PF00874 PRD domain CWR56_RS12195 PF05043 Mga helix-turn-helix domain CWR56_RS12195 PF08279 HTH domain CWR56_RS12195 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS12200 PF03612 Sorbitol phosphotransferase enzyme II N-terminus CWR56_RS12200 PF07663 Sorbitol phosphotransferase enzyme II C-terminus CWR56_RS12205 PF03608 PTS system enzyme II sorbitol-specific factor CWR56_RS12210 PF12833 Helix-turn-helix domain CWR56_RS12220 PF01546 Peptidase family M20/M25/M40 CWR56_RS12220 PF07687 Peptidase dimerisation domain CWR56_RS12225 PF01235 Sodium:alanine symporter family CWR56_RS12230 PF07690 Major Facilitator Superfamily CWR56_RS12235 PF00155 Aminotransferase class I and II CWR56_RS12240 PF01515 Phosphate acetyl/butaryl transferase CWR56_RS12245 PF00871 Acetokinase family CWR56_RS12260 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CWR56_RS12260 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CWR56_RS12260 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CWR56_RS12270 PF09339 IclR helix-turn-helix domain CWR56_RS12270 PF01614 Bacterial transcriptional regulator CWR56_RS12280 PF05746 DALR anticodon binding domain CWR56_RS12280 PF02092 Glycyl-tRNA synthetase beta subunit CWR56_RS12285 PF02091 Glycyl-tRNA synthetase alpha subunit CWR56_RS12295 PF02565 Recombination protein O C terminal CWR56_RS12295 PF11967 Recombination protein O N terminal CWR56_RS12305 PF00571 CBS domain CWR56_RS12305 PF03448 MgtE intracellular N domain CWR56_RS12305 PF01769 Divalent cation transporter CWR56_RS12310 PF01926 50S ribosome-binding GTPase CWR56_RS12310 PF07650 KH domain CWR56_RS12315 PF00383 Cytidine and deoxycytidylate deaminase zinc-binding region CWR56_RS12320 PF01219 Prokaryotic diacylglycerol kinase CWR56_RS12325 PF02130 Uncharacterized protein family UPF0054 CWR56_RS12330 PF02562 PhoH-like protein CWR56_RS12345 PF16321 Sigma 54 modulation/S30EA ribosomal protein C terminus CWR56_RS12345 PF02482 Sigma 54 modulation protein / S30EA ribosomal protein CWR56_RS12350 PF03073 TspO/MBR family CWR56_RS12355 PF09424 Yqey-like protein CWR56_RS12360 PF01165 Ribosomal protein S21 CWR56_RS12365 PF01230 HIT domain CWR56_RS12370 PF01938 TRAM domain CWR56_RS12370 PF04055 Radical SAM superfamily CWR56_RS12370 PF00919 Uncharacterized protein family UPF0004 CWR56_RS12375 PF04452 RNA methyltransferase CWR56_RS12385 PF18395 Cas3 C-terminal domain CWR56_RS12385 PF18019 HD domain CWR56_RS12385 PF00270 DEAD/DEAH box helicase CWR56_RS12410 PF00005 ABC transporter CWR56_RS12410 PF03459 TOBE domain CWR56_RS12410 PF17912 MalK OB fold domain CWR56_RS12415 PF13556 PucR C-terminal helix-turn-helix domain CWR56_RS12415 PF07905 Purine catabolism regulatory protein-like family CWR56_RS12415 PF17853 GGDEF-like domain CWR56_RS12420 PF07690 Major Facilitator Superfamily CWR56_RS12425 PF00480 ROK family CWR56_RS12435 PF00226 DnaJ domain CWR56_RS12435 PF01556 DnaJ C terminal domain CWR56_RS12435 PF00684 DnaJ central domain CWR56_RS12440 PF00012 Hsp70 protein CWR56_RS12445 PF01025 GrpE CWR56_RS12450 PF01628 HrcA protein C terminal domain CWR56_RS12455 PF04055 Radical SAM superfamily CWR56_RS12455 PF06969 HemN C-terminal domain CWR56_RS12460 PF13520 Amino acid permease CWR56_RS12465 PF01743 Poly A polymerase head domain CWR56_RS12465 PF12627 Probable RNA and SrmB- binding site of polymerase A CWR56_RS12465 PF13735 tRNA nucleotidyltransferase domain 2 putative CWR56_RS12470 PF03144 Elongation factor Tu domain 2 CWR56_RS12470 PF06421 GTP-binding protein LepA C-terminus CWR56_RS12470 PF00679 Elongation factor G C-terminus CWR56_RS12470 PF00009 Elongation factor Tu GTP binding domain CWR56_RS12485 PF03418 Germination protease CWR56_RS12500 PF01649 Ribosomal protein S20 CWR56_RS12510 PF00753 Metallo-beta-lactamase superfamily CWR56_RS12510 PF13567 Domain of unknown function (DUF4131) CWR56_RS12510 PF03772 Competence protein CWR56_RS12530 PF00899 ThiF family CWR56_RS12535 PF06725 3D domain CWR56_RS12535 PF01476 LysM domain CWR56_RS12540 PF03167 Uracil DNA glycosylase superfamily CWR56_RS12550 PF02424 ApbE family CWR56_RS12555 PF00155 Aminotransferase class I and II CWR56_RS12560 PF01321 Creatinase/Prolidase N-terminal domain CWR56_RS12560 PF00557 Metallopeptidase family M24 CWR56_RS12565 PF02378 Phosphotransferase system, EIIC CWR56_RS12570 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS12575 PF00391 PEP-utilising enzyme, mobile domain CWR56_RS12575 PF02896 PEP-utilising enzyme, TIM barrel domain CWR56_RS12575 PF00381 PTS HPr component phosphorylation site CWR56_RS12575 PF05524 PEP-utilising enzyme, N-terminal CWR56_RS12575 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS12580 PF08279 HTH domain CWR56_RS12580 PF05043 Mga helix-turn-helix domain CWR56_RS12580 PF00874 PRD domain CWR56_RS12580 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS12585 PF01546 Peptidase family M20/M25/M40 CWR56_RS12590 PF01238 Phosphomannose isomerase type I CWR56_RS12595 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS12595 PF00989 PAS fold CWR56_RS12595 PF00672 HAMP domain CWR56_RS12595 PF18698 Histidine kinase sensor domain CWR56_RS12595 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS12600 PF09107 Elongation factor SelB, winged helix CWR56_RS12600 PF09106 Elongation factor SelB, winged helix CWR56_RS12600 PF09105 Elongation factor SelB, winged helix CWR56_RS12600 PF03144 Elongation factor Tu domain 2 CWR56_RS12600 PF00009 Elongation factor Tu GTP binding domain CWR56_RS12605 PF03841 L-seryl-tRNA selenium transferase CWR56_RS12605 PF12390 Selenocysteine synthase N terminal CWR56_RS12620 PF00768 D-alanyl-D-alanine carboxypeptidase CWR56_RS12620 PF07943 Penicillin-binding protein 5, C-terminal domain CWR56_RS12630 PF14698 Argininosuccinate lyase C-terminal CWR56_RS12630 PF00206 Lyase CWR56_RS12640 PF00155 Aminotransferase class I and II CWR56_RS12645 PF00690 Cation transporter/ATPase, N-terminus CWR56_RS12645 PF00689 Cation transporting ATPase, C-terminus CWR56_RS12650 PF02557 D-alanyl-D-alanine carboxypeptidase CWR56_RS12655 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS12660 PF07690 Major Facilitator Superfamily CWR56_RS12670 PF02311 AraC-like ligand binding domain CWR56_RS12670 PF12833 Helix-turn-helix domain CWR56_RS12675 PF02056 Family 4 glycosyl hydrolase CWR56_RS12675 PF11975 Family 4 glycosyl hydrolase C-terminal domain CWR56_RS12680 PF02378 Phosphotransferase system, EIIC CWR56_RS12680 PF00367 phosphotransferase system, EIIB CWR56_RS12685 PF03123 CAT RNA binding domain CWR56_RS12685 PF00874 PRD domain CWR56_RS12690 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS12690 PF00367 phosphotransferase system, EIIB CWR56_RS12690 PF02378 Phosphotransferase system, EIIC CWR56_RS12695 PF01042 Endoribonuclease L-PSP CWR56_RS12700 PF13291 ACT domain CWR56_RS12700 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS12705 PF00155 Aminotransferase class I and II CWR56_RS12710 PF00710 Asparaginase, N-terminal CWR56_RS12710 PF17763 Glutaminase/Asparaginase C-terminal domain CWR56_RS12745 PF09334 tRNA synthetases class I (M) CWR56_RS12745 PF00133 tRNA synthetases class I (I, L, M and V) CWR56_RS12745 PF13603 Leucyl-tRNA synthetase, Domain 2 CWR56_RS12745 PF08264 Anticodon-binding domain of tRNA CWR56_RS12755 PF01966 HD domain CWR56_RS12760 PF01467 Cytidylyltransferase-like CWR56_RS12765 PF02631 RecX family CWR56_RS12770 PF02922 Carbohydrate-binding module 48 (Isoamylase N-terminal domain) CWR56_RS12770 PF02806 Alpha amylase, C-terminal all-beta domain CWR56_RS12770 PF00128 Alpha amylase, catalytic domain CWR56_RS12775 PF17932 Tetracyclin repressor-like, C-terminal domain CWR56_RS12775 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS12800 PF00266 Aminotransferase class-V CWR56_RS12810 PF02687 FtsX-like permease family CWR56_RS12810 PF00005 ABC transporter CWR56_RS12810 PF12704 MacB-like periplasmic core domain CWR56_RS12815 PF00672 HAMP domain CWR56_RS12815 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS12815 PF18698 Histidine kinase sensor domain CWR56_RS12815 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS12820 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS12820 PF00072 Response regulator receiver domain CWR56_RS12825 PF02872 5'-nucleotidase, C-terminal domain CWR56_RS12825 PF00149 Calcineurin-like phosphoesterase CWR56_RS12835 PF12706 Beta-lactamase superfamily domain CWR56_RS12840 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS12840 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CWR56_RS12845 PF00375 Sodium:dicarboxylate symporter family CWR56_RS12855 PF03062 MBOAT, membrane-bound O-acyltransferase family CWR56_RS12870 PF02156 Glycosyl hydrolase family 26 CWR56_RS12870 PF00404 Dockerin type I domain CWR56_RS12870 PF00150 Cellulase (glycosyl hydrolase family 5) CWR56_RS12870 PF03425 Carbohydrate binding domain (family 11) CWR56_RS12880 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS12885 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS12900 PF13580 SIS domain CWR56_RS12905 PF03611 PTS system sugar-specific permease component CWR56_RS12910 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS12915 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS12925 PF01467 Cytidylyltransferase-like CWR56_RS12935 PF00270 DEAD/DEAH box helicase CWR56_RS12935 PF00271 Helicase conserved C-terminal domain CWR56_RS12935 PF17191 RecG wedge domain CWR56_RS12940 PF13684 Dihydroxyacetone kinase family CWR56_RS12940 PF02734 DAK2 domain CWR56_RS12945 PF03780 Asp23 family, cell envelope-related function CWR56_RS12950 PF00830 Ribosomal L28 family CWR56_RS12965 PF13411 MerR HTH family regulatory protein CWR56_RS12965 PF07739 TipAS antibiotic-recognition domain CWR56_RS12970 PF05043 Mga helix-turn-helix domain CWR56_RS12970 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS12970 PF08279 HTH domain CWR56_RS12970 PF00874 PRD domain CWR56_RS12975 PF00874 PRD domain CWR56_RS12975 PF05043 Mga helix-turn-helix domain CWR56_RS12975 PF08279 HTH domain CWR56_RS12975 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS12980 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS12990 PF09261 Alpha mannosidase middle domain CWR56_RS12990 PF01074 Glycosyl hydrolases family 38 N-terminal domain CWR56_RS12990 PF07748 Glycosyl hydrolases family 38 C-terminal domain CWR56_RS12995 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS12995 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS13000 PF00072 Response regulator receiver domain CWR56_RS13000 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS13015 PF04263 Thiamin pyrophosphokinase, catalytic domain CWR56_RS13015 PF04265 Thiamin pyrophosphokinase, vitamin B1 binding domain CWR56_RS13020 PF00834 Ribulose-phosphate 3 epimerase family CWR56_RS13025 PF16745 RsgA N-terminal domain CWR56_RS13025 PF03193 RsgA GTPase CWR56_RS13035 PF03793 PASTA domain CWR56_RS13035 PF00069 Protein kinase domain CWR56_RS13045 PF04055 Radical SAM superfamily CWR56_RS13050 PF01029 NusB family CWR56_RS13050 PF01189 16S rRNA methyltransferase RsmB/F CWR56_RS13055 PF04298 Putative neutral zinc metallopeptidase CWR56_RS13065 PF00551 Formyl transferase CWR56_RS13065 PF02911 Formyl transferase, C-terminal domain CWR56_RS13070 PF01327 Polypeptide deformylase CWR56_RS13075 PF00271 Helicase conserved C-terminal domain CWR56_RS13075 PF04851 Type III restriction enzyme, res subunit CWR56_RS13075 PF18074 Primosomal protein N C-terminal domain CWR56_RS13075 PF18319 PriA DNA helicase Cys-rich region (CRR) domain CWR56_RS13075 PF17764 3′ DNA-binding domain (3′BD) CWR56_RS13080 PF02441 Flavoprotein CWR56_RS13080 PF04127 DNA / pantothenate metabolism flavoprotein CWR56_RS13085 PF01192 RNA polymerase Rpb6 CWR56_RS13090 PF00625 Guanylate kinase CWR56_RS13095 PF08340 Domain of unknown function (DUF1732) CWR56_RS13095 PF03755 YicC-like family, N-terminal region CWR56_RS13100 PF01678 Diaminopimelate epimerase CWR56_RS13105 PF01212 Beta-eliminating lyase CWR56_RS13110 PF05670 NFACT protein RNA binding domain CWR56_RS13115 PF00005 ABC transporter CWR56_RS13115 PF16326 ABC transporter C-terminal domain CWR56_RS13115 PF12848 ABC transporter CWR56_RS13120 PF00860 Permease family CWR56_RS13125 PF00156 Phosphoribosyl transferase domain CWR56_RS13130 PF00849 RNA pseudouridylate synthase CWR56_RS13130 PF01479 S4 domain CWR56_RS13135 PF01252 Signal peptidase (SPase) II CWR56_RS13140 PF01522 Polysaccharide deacetylase CWR56_RS13145 PF01258 Prokaryotic dksA/traR C4-type zinc finger CWR56_RS13150 PF02554 Carbon starvation protein CstA CWR56_RS13155 PF00072 Response regulator receiver domain CWR56_RS13155 PF04397 LytTr DNA-binding domain CWR56_RS13160 PF06580 Histidine kinase CWR56_RS13160 PF07694 5TMR of 5TMR-LYT CWR56_RS13160 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS13190 PF00579 tRNA synthetases class I (W and Y) CWR56_RS13195 PF01048 Phosphorylase superfamily CWR56_RS13200 PF13520 Amino acid permease CWR56_RS13205 PF00557 Metallopeptidase family M24 CWR56_RS13205 PF01321 Creatinase/Prolidase N-terminal domain CWR56_RS13210 PF02645 Uncharacterised protein, DegV family COG1307 CWR56_RS13215 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS13215 PF08360 QacR-like protein, C-terminal region CWR56_RS13225 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CWR56_RS13225 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CWR56_RS13230 PF00133 tRNA synthetases class I (I, L, M and V) CWR56_RS13230 PF08264 Anticodon-binding domain of tRNA CWR56_RS13235 PF05103 DivIVA protein CWR56_RS13240 PF01479 S4 domain CWR56_RS13240 PF17774 Putative RNA-binding domain in YlmH CWR56_RS13250 PF04472 Cell division protein SepF CWR56_RS13255 PF01168 Alanine racemase, N-terminal domain CWR56_RS13270 PF05167 Uncharacterised ACR (DUF711) CWR56_RS13285 PF09547 Stage IV sporulation protein A (spore_IV_A) CWR56_RS13295 PF13520 Amino acid permease CWR56_RS13300 PF01321 Creatinase/Prolidase N-terminal domain CWR56_RS13300 PF00557 Metallopeptidase family M24 CWR56_RS13305 PF00440 Bacterial regulatory proteins, tetR family CWR56_RS13310 PF01210 NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus CWR56_RS13310 PF07479 NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus CWR56_RS13315 PF02660 Glycerol-3-phosphate acyltransferase CWR56_RS13320 PF14714 KH-domain-like of EngA bacterial GTPase enzymes, C-terminal CWR56_RS13320 PF01926 50S ribosome-binding GTPase CWR56_RS13335 PF14045 YIEGIA protein CWR56_RS13340 PF14045 YIEGIA protein CWR56_RS13345 PF00989 PAS fold CWR56_RS13345 PF16736 Single Cache-like CWR56_RS13345 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS13345 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS13350 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS13350 PF00072 Response regulator receiver domain CWR56_RS13355 PF02578 Multi-copper polyphenol oxidoreductase laccase CWR56_RS13360 PF03477 ATP cone domain CWR56_RS13365 PF05239 PRC-barrel domain CWR56_RS13370 PF04542 Sigma-70 region 2 CWR56_RS13370 PF04545 Sigma-70, region 4 CWR56_RS13370 PF04539 Sigma-70 region 3 CWR56_RS13375 PF04545 Sigma-70, region 4 CWR56_RS13375 PF04542 Sigma-70 region 2 CWR56_RS13380 PF03419 Sporulation factor SpoIIGA CWR56_RS13390 PF12327 FtsZ family, C-terminal domain CWR56_RS13390 PF00091 Tubulin/FtsZ family, GTPase domain CWR56_RS13395 PF06947 Protein of unknown function (DUF1290) CWR56_RS13410 PF08478 POTRA domain, FtsQ-type CWR56_RS13410 PF03799 Cell division protein FtsQ CWR56_RS13415 PF04101 Glycosyltransferase family 28 C-terminal domain CWR56_RS13415 PF03033 Glycosyltransferase family 28 N-terminal domain CWR56_RS13420 PF01098 Cell cycle protein CWR56_RS13425 PF02875 Mur ligase family, glutamate ligase domain CWR56_RS13425 PF08245 Mur ligase middle domain CWR56_RS13430 PF10555 Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1 CWR56_RS13430 PF00953 Glycosyl transferase family 4 CWR56_RS13435 PF08245 Mur ligase middle domain CWR56_RS13435 PF01225 Mur ligase family, catalytic domain CWR56_RS13435 PF02875 Mur ligase family, glutamate ligase domain CWR56_RS13440 PF00905 Penicillin binding protein transpeptidase domain CWR56_RS13440 PF03793 PASTA domain CWR56_RS13440 PF03717 Penicillin-binding Protein dimerisation domain CWR56_RS13450 PF01795 MraW methylase family CWR56_RS13455 PF01790 Prolipoprotein diacylglyceryl transferase CWR56_RS13460 PF00675 Insulinase (Peptidase family M16) CWR56_RS13460 PF05193 Peptidase M16 inactive domain CWR56_RS13470 PF01926 50S ribosome-binding GTPase CWR56_RS13470 PF06071 Protein of unknown function (DUF933) CWR56_RS13475 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS13475 PF00563 EAL domain CWR56_RS13475 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS13480 PF01225 Mur ligase family, catalytic domain CWR56_RS13480 PF08245 Mur ligase middle domain CWR56_RS13480 PF02875 Mur ligase family, glutamate ligase domain CWR56_RS13485 PF12833 Helix-turn-helix domain CWR56_RS13490 PF00367 phosphotransferase system, EIIB CWR56_RS13490 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS13490 PF02378 Phosphotransferase system, EIIC CWR56_RS13495 PF03123 CAT RNA binding domain CWR56_RS13495 PF00874 PRD domain CWR56_RS13500 PF00999 Sodium/hydrogen exchanger family CWR56_RS13505 PF00005 ABC transporter CWR56_RS13505 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CWR56_RS13510 PF08352 Oligopeptide/dipeptide transporter, C-terminal region CWR56_RS13510 PF00005 ABC transporter CWR56_RS13515 PF00496 Bacterial extracellular solute-binding proteins, family 5 Middle CWR56_RS13520 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS13525 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS13525 PF12911 N-terminal TM domain of oligopeptide transport permease C CWR56_RS13530 PF03466 LysR substrate binding domain CWR56_RS13530 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS13535 PF02803 Thiolase, C-terminal domain CWR56_RS13535 PF00108 Thiolase, N-terminal domain CWR56_RS13540 PF01144 Coenzyme A transferase CWR56_RS13545 PF01144 Coenzyme A transferase CWR56_RS13560 PF00188 Cysteine-rich secretory protein family CWR56_RS13570 PF01855 Pyruvate flavodoxin/ferredoxin oxidoreductase, thiamine diP-bdg CWR56_RS13570 PF01558 Pyruvate ferredoxin/flavodoxin oxidoreductase CWR56_RS13570 PF17147 Pyruvate:ferredoxin oxidoreductase core domain II CWR56_RS13570 PF10371 Domain of unknown function CWR56_RS13570 PF02775 Thiamine pyrophosphate enzyme, C-terminal TPP binding domain CWR56_RS13575 PF06130 Phosphate propanoyltransferase CWR56_RS13605 PF00269 Small, acid-soluble spore proteins, alpha/beta type CWR56_RS13615 PF01569 PAP2 superfamily CWR56_RS13620 PF00156 Phosphoribosyl transferase domain CWR56_RS13625 PF00155 Aminotransferase class I and II CWR56_RS13640 PF03590 Aspartate-ammonia ligase CWR56_RS13645 PF00155 Aminotransferase class I and II CWR56_RS13650 PF01546 Peptidase family M20/M25/M40 CWR56_RS13650 PF07687 Peptidase dimerisation domain CWR56_RS13660 PF07670 Nucleoside recognition CWR56_RS13665 PF13426 PAS domain CWR56_RS13665 PF02954 Bacterial regulatory protein, Fis family CWR56_RS13665 PF00158 Sigma-54 interaction domain CWR56_RS13675 PF05525 Branched-chain amino acid transport protein CWR56_RS13685 PF00860 Permease family CWR56_RS13690 PF01979 Amidohydrolase family CWR56_RS13700 PF07690 Major Facilitator Superfamily CWR56_RS13705 PF18317 Shikimate 5'-dehydrogenase C-terminal domain CWR56_RS13705 PF08501 Shikimate dehydrogenase substrate binding domain CWR56_RS13710 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS13710 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CWR56_RS13720 PF03466 LysR substrate binding domain CWR56_RS13720 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS13730 PF03734 L,D-transpeptidase catalytic domain CWR56_RS13730 PF01476 LysM domain CWR56_RS13735 PF16363 GDP-mannose 4,6 dehydratase CWR56_RS13740 PF00483 Nucleotidyl transferase CWR56_RS13765 PF04203 Sortase domain CWR56_RS13785 PF01522 Polysaccharide deacetylase CWR56_RS13795 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS13800 PF00072 Response regulator receiver domain CWR56_RS13800 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS13810 PF01522 Polysaccharide deacetylase CWR56_RS13815 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CWR56_RS13815 PF04101 Glycosyltransferase family 28 C-terminal domain CWR56_RS13820 PF00464 Serine hydroxymethyltransferase CWR56_RS13840 PF02583 Metal-sensitive transcriptional repressor CWR56_RS13850 PF00158 Sigma-54 interaction domain CWR56_RS13850 PF13426 PAS domain CWR56_RS13850 PF02954 Bacterial regulatory protein, Fis family CWR56_RS13855 PF00155 Aminotransferase class I and II CWR56_RS13860 PF03553 Na+/H+ antiporter family CWR56_RS13870 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS13870 PF04122 Putative cell wall binding repeat 2 CWR56_RS13875 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS13875 PF03466 LysR substrate binding domain CWR56_RS13880 PF00795 Carbon-nitrogen hydrolase CWR56_RS13890 PF00152 tRNA synthetases class II (D, K and N) CWR56_RS13890 PF02938 GAD domain CWR56_RS13890 PF01336 OB-fold nucleic acid binding domain CWR56_RS13895 PF03129 Anticodon binding domain CWR56_RS13895 PF13393 Histidyl-tRNA synthetase CWR56_RS13900 PF04055 Radical SAM superfamily CWR56_RS13905 PF00753 Metallo-beta-lactamase superfamily CWR56_RS13910 PF02580 D-Tyr-tRNA(Tyr) deacylase CWR56_RS13915 PF02824 TGS domain CWR56_RS13915 PF04607 Region found in RelA / SpoT proteins CWR56_RS13915 PF13291 ACT domain CWR56_RS13920 PF00156 Phosphoribosyl transferase domain CWR56_RS13925 PF10141 Single-strand DNA-specific exonuclease, C terminal domain CWR56_RS13925 PF17768 RecJ OB domain CWR56_RS13925 PF02272 DHHA1 domain CWR56_RS13925 PF01368 DHH family CWR56_RS13930 PF03109 ABC1 family CWR56_RS13935 PF00132 Bacterial transferase hexapeptide (six repeats) CWR56_RS13965 PF08448 PAS fold CWR56_RS13965 PF00563 EAL domain CWR56_RS13965 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS13965 PF08447 PAS fold CWR56_RS13970 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS13975 PF02896 PEP-utilising enzyme, TIM barrel domain CWR56_RS13975 PF00391 PEP-utilising enzyme, mobile domain CWR56_RS13975 PF05524 PEP-utilising enzyme, N-terminal CWR56_RS13980 PF00381 PTS HPr component phosphorylation site CWR56_RS13990 PF12950 TaqI-like C-terminal specificity domain CWR56_RS13990 PF07669 Eco57I restriction-modification methylase CWR56_RS14000 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS14000 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS14000 PF00563 EAL domain CWR56_RS14005 PF08239 Bacterial SH3 domain CWR56_RS14005 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS14010 PF01255 Putative undecaprenyl diphosphate synthase CWR56_RS14025 PF03816 Cell envelope-related transcriptional attenuator domain CWR56_RS14030 PF03816 Cell envelope-related transcriptional attenuator domain CWR56_RS14035 PF02638 Glycosyl hydrolase-like 10 CWR56_RS14040 PF00877 NlpC/P60 family CWR56_RS14040 PF01476 LysM domain CWR56_RS14040 PF08239 Bacterial SH3 domain CWR56_RS14045 PF02719 Polysaccharide biosynthesis protein CWR56_RS14050 PF13439 Glycosyltransferase Family 4 CWR56_RS14050 PF00534 Glycosyl transferases group 1 CWR56_RS14055 PF03720 UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain CWR56_RS14055 PF00984 UDP-glucose/GDP-mannose dehydrogenase family, central domain CWR56_RS14055 PF03721 UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain CWR56_RS14060 PF00535 Glycosyl transferase family 2 CWR56_RS14065 PF00535 Glycosyl transferase family 2 CWR56_RS14070 PF00535 Glycosyl transferase family 2 CWR56_RS14075 PF00535 Glycosyl transferase family 2 CWR56_RS14075 PF04464 CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase CWR56_RS14080 PF00535 Glycosyl transferase family 2 CWR56_RS14095 PF00483 Nucleotidyl transferase CWR56_RS14095 PF01050 Mannose-6-phosphate isomerase CWR56_RS14100 PF00408 Phosphoglucomutase/phosphomannomutase, C-terminal domain CWR56_RS14100 PF02878 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I CWR56_RS14100 PF02880 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III CWR56_RS14100 PF02879 Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II CWR56_RS14105 PF03023 Lipid II flippase MurJ CWR56_RS14110 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS14110 PF04122 Putative cell wall binding repeat 2 CWR56_RS14115 PF02397 Bacterial sugar transferase CWR56_RS14120 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS14120 PF08239 Bacterial SH3 domain CWR56_RS14135 PF04122 Putative cell wall binding repeat 2 CWR56_RS14135 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS14145 PF04138 GtrA-like protein CWR56_RS14150 PF04122 Putative cell wall binding repeat 2 CWR56_RS14150 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS14165 PF01043 SecA preprotein cross-linking domain CWR56_RS14165 PF07516 SecA Wing and Scaffold domain CWR56_RS14165 PF07517 SecA DEAD-like domain CWR56_RS14200 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS14200 PF04122 Putative cell wall binding repeat 2 CWR56_RS14215 PF02699 Preprotein translocase subunit CWR56_RS14220 PF01702 Queuine tRNA-ribosyltransferase CWR56_RS14230 PF02547 Queuosine biosynthesis protein CWR56_RS14235 PF05496 Holliday junction DNA helicase RuvB P-loop domain CWR56_RS14235 PF05491 RuvB C-terminal winged helix domain CWR56_RS14235 PF17864 RuvB AAA lid domain CWR56_RS14240 PF07499 RuvA, C-terminal domain CWR56_RS14240 PF01330 RuvA N terminal domain CWR56_RS14245 PF02075 Crossover junction endodeoxyribonuclease RuvC CWR56_RS14270 PF02447 GntP family permease CWR56_RS14275 PF14833 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase CWR56_RS14275 PF03446 NAD binding domain of 6-phosphogluconate dehydrogenase CWR56_RS14280 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS14280 PF07729 FCD domain CWR56_RS14295 PF00664 ABC transporter transmembrane region CWR56_RS14295 PF00005 ABC transporter CWR56_RS14300 PF00664 ABC transporter transmembrane region CWR56_RS14300 PF00005 ABC transporter CWR56_RS14315 PF07670 Nucleoside recognition CWR56_RS14320 PF07670 Nucleoside recognition CWR56_RS14325 PF07687 Peptidase dimerisation domain CWR56_RS14325 PF01546 Peptidase family M20/M25/M40 CWR56_RS14345 PF00724 NADH:flavin oxidoreductase / NADH oxidase family CWR56_RS14345 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS14355 PF00155 Aminotransferase class I and II CWR56_RS14360 PF00892 EamA-like transporter family CWR56_RS14365 PF07737 Anthrax toxin lethal factor, N- and C-terminal domain CWR56_RS14375 PF01545 Cation efflux family CWR56_RS14375 PF16916 Dimerisation domain of Zinc Transporter CWR56_RS14385 PF00689 Cation transporting ATPase, C-terminus CWR56_RS14385 PF00690 Cation transporter/ATPase, N-terminus CWR56_RS14390 PF00464 Serine hydroxymethyltransferase CWR56_RS14395 PF03806 AbgT putative transporter family CWR56_RS14400 PF01546 Peptidase family M20/M25/M40 CWR56_RS14400 PF07687 Peptidase dimerisation domain CWR56_RS14410 PF00072 Response regulator receiver domain CWR56_RS14410 PF08769 Sporulation initiation factor Spo0A C terminal CWR56_RS14420 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CWR56_RS14420 PF02403 Seryl-tRNA synthetase N-terminal domain CWR56_RS14425 PF07969 Amidohydrolase family CWR56_RS14430 PF00795 Carbon-nitrogen hydrolase CWR56_RS14435 PF08240 Alcohol dehydrogenase GroES-like domain CWR56_RS14435 PF00107 Zinc-binding dehydrogenase CWR56_RS14445 PF02915 Rubrerythrin CWR56_RS14455 PF07282 Putative transposase DNA-binding domain CWR56_RS14455 PF01385 Probable transposase CWR56_RS14455 PF12323 Helix-turn-helix domain CWR56_RS14480 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS14480 PF00266 Aminotransferase class-V CWR56_RS14485 PF08220 DeoR-like helix-turn-helix domain CWR56_RS14485 PF00455 DeoR C terminal sensor domain CWR56_RS14490 PF00550 Phosphopantetheine attachment site CWR56_RS14495 PF03062 MBOAT, membrane-bound O-acyltransferase family CWR56_RS14500 PF00501 AMP-binding enzyme CWR56_RS14500 PF13193 AMP-binding enzyme C-terminal domain CWR56_RS14510 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CWR56_RS14510 PF02894 Oxidoreductase family, C-terminal alpha/beta domain CWR56_RS14520 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS14525 PF00571 CBS domain CWR56_RS14525 PF01595 Cyclin M transmembrane N-terminal domain CWR56_RS14525 PF03471 Transporter associated domain CWR56_RS14530 PF07969 Amidohydrolase family CWR56_RS14550 PF00989 PAS fold CWR56_RS14550 PF02954 Bacterial regulatory protein, Fis family CWR56_RS14550 PF00158 Sigma-54 interaction domain CWR56_RS14555 PF00561 alpha/beta hydrolase fold CWR56_RS14555 PF08386 TAP-like protein CWR56_RS14565 PF01523 Putative modulator of DNA gyrase CWR56_RS14570 PF01523 Putative modulator of DNA gyrase CWR56_RS14575 PF01266 FAD dependent oxidoreductase CWR56_RS14580 PF13426 PAS domain CWR56_RS14580 PF02954 Bacterial regulatory protein, Fis family CWR56_RS14580 PF00158 Sigma-54 interaction domain CWR56_RS14585 PF03812 2-keto-3-deoxygluconate permease CWR56_RS14595 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CWR56_RS14600 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS14600 PF00563 EAL domain CWR56_RS14600 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS14605 PF01554 MatE CWR56_RS14610 PF00005 ABC transporter CWR56_RS14615 PF01032 FecCD transport family CWR56_RS14620 PF01032 FecCD transport family CWR56_RS14635 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CWR56_RS14640 PF04794 YdjC-like protein CWR56_RS14645 PF02056 Family 4 glycosyl hydrolase CWR56_RS14645 PF11975 Family 4 glycosyl hydrolase C-terminal domain CWR56_RS14650 PF02378 Phosphotransferase system, EIIC CWR56_RS14655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS14660 PF07702 UTRA domain CWR56_RS14660 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS14665 PF01554 MatE CWR56_RS14670 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS14675 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS14680 PF00005 ABC transporter CWR56_RS14680 PF08402 TOBE domain CWR56_RS14690 PF01813 ATP synthase subunit D CWR56_RS14695 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CWR56_RS14695 PF02874 ATP synthase alpha/beta family, beta-barrel domain CWR56_RS14700 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CWR56_RS14700 PF16886 ATPsynthase alpha/beta subunit N-term extension CWR56_RS14700 PF02874 ATP synthase alpha/beta family, beta-barrel domain CWR56_RS14705 PF01990 ATP synthase (F/14-kDa) subunit CWR56_RS14715 PF01991 ATP synthase (E/31 kDa) subunit CWR56_RS14720 PF00137 ATP synthase subunit C CWR56_RS14725 PF01496 V-type ATPase 116kDa subunit family CWR56_RS14750 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS14750 PF00563 EAL domain CWR56_RS14750 PF03707 Bacterial signalling protein N terminal repeat CWR56_RS14755 PF00171 Aldehyde dehydrogenase family CWR56_RS14755 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS14765 PF02441 Flavoprotein CWR56_RS14775 PF13193 AMP-binding enzyme C-terminal domain CWR56_RS14775 PF00501 AMP-binding enzyme CWR56_RS14780 PF00108 Thiolase, N-terminal domain CWR56_RS14780 PF02803 Thiolase, C-terminal domain CWR56_RS14785 PF02632 BioY family CWR56_RS14800 PF09827 CRISPR associated protein Cas2 CWR56_RS14805 PF01867 CRISPR associated protein Cas1 CWR56_RS14815 PF00271 Helicase conserved C-terminal domain CWR56_RS14815 PF00270 DEAD/DEAH box helicase CWR56_RS14815 PF18019 HD domain CWR56_RS14845 PF02687 FtsX-like permease family CWR56_RS14850 PF00005 ABC transporter CWR56_RS14855 PF02673 Bacitracin resistance protein BacA CWR56_RS14860 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS14865 PF00072 Response regulator receiver domain CWR56_RS14865 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS14875 PF00005 ABC transporter CWR56_RS14880 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS14895 PF00268 Ribonucleotide reductase, small chain CWR56_RS14900 PF08343 Ribonucleotide reductase N-terminal CWR56_RS14900 PF00317 Ribonucleotide reductase, all-alpha domain CWR56_RS14900 PF02867 Ribonucleotide reductase, barrel domain CWR56_RS14910 PF00005 ABC transporter CWR56_RS14915 PF01032 FecCD transport family CWR56_RS14930 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS14935 PF00072 Response regulator receiver domain CWR56_RS14935 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS14940 PF02687 FtsX-like permease family CWR56_RS14945 PF00005 ABC transporter CWR56_RS14960 PF00701 Dihydrodipicolinate synthetase family CWR56_RS14965 PF01557 Fumarylacetoacetate (FAA) hydrolase family CWR56_RS14970 PF04295 D-galactarate dehydratase / Altronate hydrolase, C terminus CWR56_RS14980 PF03812 2-keto-3-deoxygluconate permease CWR56_RS14990 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS14995 PF03734 L,D-transpeptidase catalytic domain CWR56_RS15005 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS15005 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CWR56_RS15010 PF02683 Cytochrome C biogenesis protein transmembrane region CWR56_RS15015 PF01638 HxlR-like helix-turn-helix CWR56_RS15020 PF01074 Glycosyl hydrolases family 38 N-terminal domain CWR56_RS15020 PF09261 Alpha mannosidase middle domain CWR56_RS15020 PF07748 Glycosyl hydrolases family 38 C-terminal domain CWR56_RS15030 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15035 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15035 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15040 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15040 PF08279 HTH domain CWR56_RS15040 PF00874 PRD domain CWR56_RS15040 PF05043 Mga helix-turn-helix domain CWR56_RS15045 PF06800 Sugar transport protein CWR56_RS15080 PF08331 Domain of unknown function (DUF1730) CWR56_RS15090 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15095 PF00571 CBS domain CWR56_RS15095 PF01380 SIS domain CWR56_RS15100 PF00155 Aminotransferase class I and II CWR56_RS15105 PF02378 Phosphotransferase system, EIIC CWR56_RS15105 PF00367 phosphotransferase system, EIIB CWR56_RS15110 PF03123 CAT RNA binding domain CWR56_RS15110 PF00874 PRD domain CWR56_RS15115 PF00266 Aminotransferase class-V CWR56_RS15120 PF00085 Thioredoxin CWR56_RS15130 PF02567 Phenazine biosynthesis-like protein CWR56_RS15135 PF00854 POT family CWR56_RS15150 PF07724 AAA domain (Cdc48 subfamily) CWR56_RS15150 PF10431 C-terminal, D2-small domain, of ClpB protein CWR56_RS15150 PF02861 Clp amino terminal domain, pathogenicity island component CWR56_RS15150 PF17871 AAA lid domain CWR56_RS15150 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS15160 PF00561 alpha/beta hydrolase fold CWR56_RS15175 PF01380 SIS domain CWR56_RS15175 PF01418 Helix-turn-helix domain, rpiR family CWR56_RS15180 PF01869 BadF/BadG/BcrA/BcrD ATPase family CWR56_RS15185 PF13580 SIS domain CWR56_RS15195 PF02378 Phosphotransferase system, EIIC CWR56_RS15210 PF03702 Anhydro-N-acetylmuramic acid kinase CWR56_RS15220 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS15225 PF00072 Response regulator receiver domain CWR56_RS15225 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS15235 PF00005 ABC transporter CWR56_RS15245 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15255 PF11975 Family 4 glycosyl hydrolase C-terminal domain CWR56_RS15255 PF02056 Family 4 glycosyl hydrolase CWR56_RS15260 PF00367 phosphotransferase system, EIIB CWR56_RS15260 PF02378 Phosphotransferase system, EIIC CWR56_RS15275 PF01261 Xylose isomerase-like TIM barrel CWR56_RS15280 PF00370 FGGY family of carbohydrate kinases, N-terminal domain CWR56_RS15280 PF02782 FGGY family of carbohydrate kinases, C-terminal domain CWR56_RS15285 PF00480 ROK family CWR56_RS15295 PF03830 PTS system sorbose subfamily IIB component CWR56_RS15295 PF03610 PTS system fructose IIA component CWR56_RS15300 PF03613 PTS system mannose/fructose/sorbose family IID component CWR56_RS15305 PF03609 PTS system sorbose-specific iic component CWR56_RS15310 PF01055 Glycosyl hydrolases family 31 CWR56_RS15330 PF04851 Type III restriction enzyme, res subunit CWR56_RS15330 PF04313 Type I restriction enzyme R protein N terminus (HSDR_N) CWR56_RS15330 PF00271 Helicase conserved C-terminal domain CWR56_RS15330 PF08463 EcoEI R protein C-terminal CWR56_RS15355 PF02384 N-6 DNA Methylase CWR56_RS15360 PF01116 Fructose-bisphosphate aldolase class-II CWR56_RS15365 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15365 PF02378 Phosphotransferase system, EIIC CWR56_RS15365 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15370 PF00294 pfkB family carbohydrate kinase CWR56_RS15380 PF00232 Glycosyl hydrolase family 1 CWR56_RS15390 PF02378 Phosphotransferase system, EIIC CWR56_RS15400 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15400 PF02378 Phosphotransferase system, EIIC CWR56_RS15400 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15405 PF02595 Glycerate kinase family CWR56_RS15410 PF01074 Glycosyl hydrolases family 38 N-terminal domain CWR56_RS15410 PF09261 Alpha mannosidase middle domain CWR56_RS15410 PF07748 Glycosyl hydrolases family 38 C-terminal domain CWR56_RS15415 PF02378 Phosphotransferase system, EIIC CWR56_RS15415 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15415 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15420 PF01380 SIS domain CWR56_RS15420 PF01418 Helix-turn-helix domain, rpiR family CWR56_RS15425 PF04794 YdjC-like protein CWR56_RS15430 PF00367 phosphotransferase system, EIIB CWR56_RS15430 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15430 PF02378 Phosphotransferase system, EIIC CWR56_RS15435 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS15435 PF07702 UTRA domain CWR56_RS15440 PF16657 Maltogenic Amylase, C-terminal domain CWR56_RS15440 PF00128 Alpha amylase, catalytic domain CWR56_RS15445 PF13520 Amino acid permease CWR56_RS15450 PF07722 Peptidase C26 CWR56_RS15455 PF00158 Sigma-54 interaction domain CWR56_RS15455 PF13426 PAS domain CWR56_RS15455 PF02954 Bacterial regulatory protein, Fis family CWR56_RS15465 PF00232 Glycosyl hydrolase family 1 CWR56_RS15470 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15470 PF02378 Phosphotransferase system, EIIC CWR56_RS15470 PF00367 phosphotransferase system, EIIB CWR56_RS15475 PF03123 CAT RNA binding domain CWR56_RS15475 PF00874 PRD domain CWR56_RS15485 PF03606 C4-dicarboxylate anaerobic carrier CWR56_RS15490 PF02378 Phosphotransferase system, EIIC CWR56_RS15490 PF00367 phosphotransferase system, EIIB CWR56_RS15495 PF01546 Peptidase family M20/M25/M40 CWR56_RS15500 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15510 PF00465 Iron-containing alcohol dehydrogenase CWR56_RS15515 PF00923 Transaldolase/Fructose-6-phosphate aldolase CWR56_RS15520 PF08279 HTH domain CWR56_RS15520 PF05043 Mga helix-turn-helix domain CWR56_RS15520 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15520 PF00874 PRD domain CWR56_RS15525 PF10035 Uncharacterized protein conserved in bacteria (DUF2179) CWR56_RS15525 PF02588 Uncharacterised 5xTM membrane BCR, YitT family COG1284 CWR56_RS15530 PF00834 Ribulose-phosphate 3 epimerase family CWR56_RS15535 PF00365 Phosphofructokinase CWR56_RS15545 PF07687 Peptidase dimerisation domain CWR56_RS15545 PF01546 Peptidase family M20/M25/M40 CWR56_RS15550 PF01546 Peptidase family M20/M25/M40 CWR56_RS15560 PF00232 Glycosyl hydrolase family 1 CWR56_RS15565 PF00367 phosphotransferase system, EIIB CWR56_RS15565 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15565 PF02378 Phosphotransferase system, EIIC CWR56_RS15580 PF00201 UDP-glucoronosyl and UDP-glucosyl transferase CWR56_RS15585 PF01381 Helix-turn-helix CWR56_RS15600 PF01022 Bacterial regulatory protein, arsR family CWR56_RS15605 PF00881 Nitroreductase family CWR56_RS15610 PF00232 Glycosyl hydrolase family 1 CWR56_RS15615 PF00367 phosphotransferase system, EIIB CWR56_RS15615 PF02378 Phosphotransferase system, EIIC CWR56_RS15615 PF00358 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 1 CWR56_RS15620 PF03123 CAT RNA binding domain CWR56_RS15620 PF00874 PRD domain CWR56_RS15625 PF00367 phosphotransferase system, EIIB CWR56_RS15625 PF02378 Phosphotransferase system, EIIC CWR56_RS15630 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS15635 PF03636 Glycosyl hydrolase family 65, N-terminal domain CWR56_RS15635 PF03633 Glycosyl hydrolase family 65, C-terminal domain CWR56_RS15635 PF03632 Glycosyl hydrolase family 65 central catalytic domain CWR56_RS15640 PF00232 Glycosyl hydrolase family 1 CWR56_RS15645 PF12833 Helix-turn-helix domain CWR56_RS15650 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15650 PF02378 Phosphotransferase system, EIIC CWR56_RS15650 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15655 PF00874 PRD domain CWR56_RS15655 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15655 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15655 PF08279 HTH domain CWR56_RS15655 PF05043 Mga helix-turn-helix domain CWR56_RS15660 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS15660 PF00359 Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 CWR56_RS15665 PF01116 Fructose-bisphosphate aldolase class-II CWR56_RS15685 PF01965 DJ-1/PfpI family CWR56_RS15700 PF04203 Sortase domain CWR56_RS15705 PF00005 ABC transporter CWR56_RS15710 PF00005 ABC transporter CWR56_RS15710 PF12704 MacB-like periplasmic core domain CWR56_RS15710 PF02687 FtsX-like permease family CWR56_RS15745 PF02463 RecF/RecN/SMC N terminal domain CWR56_RS15780 PF00772 DnaB-like helicase N terminal domain CWR56_RS15780 PF03796 DnaB-like helicase C terminal domain CWR56_RS15800 PF01381 Helix-turn-helix CWR56_RS15820 PF00589 Phage integrase family CWR56_RS15820 PF14659 Phage integrase, N-terminal SAM-like domain CWR56_RS15845 PF01668 SmpB protein CWR56_RS15870 PF13732 Domain of unknown function (DUF4162) CWR56_RS15870 PF00005 ABC transporter CWR56_RS15880 PF00773 RNB domain CWR56_RS15880 PF08206 Ribonuclease B OB domain CWR56_RS15880 PF17876 Cold shock domain CWR56_RS15880 PF00575 S1 RNA binding domain CWR56_RS15895 PF01161 Phosphatidylethanolamine-binding protein CWR56_RS15915 PF00113 Enolase, C-terminal TIM barrel domain CWR56_RS15915 PF03952 Enolase, N-terminal domain CWR56_RS15920 PF06415 BPG-independent PGAM N-terminus (iPGM_N) CWR56_RS15920 PF01676 Metalloenzyme superfamily CWR56_RS15925 PF00121 Triosephosphate isomerase CWR56_RS15930 PF00162 Phosphoglycerate kinase CWR56_RS15935 PF00044 Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain CWR56_RS15935 PF02800 Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain CWR56_RS15940 PF04198 Putative sugar-binding domain CWR56_RS15945 PF04552 Sigma-54, DNA binding domain CWR56_RS15945 PF00309 Sigma-54 factor, Activator interacting domain (AID) CWR56_RS15945 PF04963 Sigma-54 factor, core binding domain CWR56_RS15950 PF02738 Molybdopterin-binding domain of aldehyde dehydrogenase CWR56_RS15950 PF01315 Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain CWR56_RS15955 PF01979 Amidohydrolase family CWR56_RS15960 PF01180 Dihydroorotate dehydrogenase CWR56_RS15965 PF00860 Permease family CWR56_RS15970 PF01979 Amidohydrolase family CWR56_RS15975 PF07969 Amidohydrolase family CWR56_RS15980 PF01546 Peptidase family M20/M25/M40 CWR56_RS15980 PF07687 Peptidase dimerisation domain CWR56_RS15985 PF00291 Pyridoxal-phosphate dependent enzyme CWR56_RS15995 PF02954 Bacterial regulatory protein, Fis family CWR56_RS15995 PF00158 Sigma-54 interaction domain CWR56_RS15995 PF13188 PAS domain CWR56_RS16000 PF01042 Endoribonuclease L-PSP CWR56_RS16015 PF02525 Flavodoxin-like fold CWR56_RS16020 PF13411 MerR HTH family regulatory protein CWR56_RS16030 PF04122 Putative cell wall binding repeat 2 CWR56_RS16030 PF01520 N-acetylmuramoyl-L-alanine amidase CWR56_RS16040 PF12833 Helix-turn-helix domain CWR56_RS16045 PF00005 ABC transporter CWR56_RS16045 PF17760 UvrA interaction domain CWR56_RS16045 PF17755 UvrA DNA-binding domain CWR56_RS16055 PF13411 MerR HTH family regulatory protein CWR56_RS16060 PF07690 Major Facilitator Superfamily CWR56_RS16075 PF00005 ABC transporter CWR56_RS16080 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS16080 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS16080 PF00672 HAMP domain CWR56_RS16085 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS16085 PF00072 Response regulator receiver domain CWR56_RS16090 PF02096 60Kd inner membrane protein CWR56_RS16100 PF00881 Nitroreductase family CWR56_RS16110 PF01554 MatE CWR56_RS16135 PF13649 Methyltransferase domain CWR56_RS16145 PF12833 Helix-turn-helix domain CWR56_RS16150 PF00005 ABC transporter CWR56_RS16150 PF00571 CBS domain CWR56_RS16155 PF04069 Substrate binding domain of ABC-type glycine betaine transport system CWR56_RS16160 PF17755 UvrA DNA-binding domain CWR56_RS16160 PF00005 ABC transporter CWR56_RS16160 PF17760 UvrA interaction domain CWR56_RS16170 PF01430 Hsp33 protein CWR56_RS16175 PF13649 Methyltransferase domain CWR56_RS16185 PF07687 Peptidase dimerisation domain CWR56_RS16185 PF01546 Peptidase family M20/M25/M40 CWR56_RS16190 PF03313 Serine dehydratase alpha chain CWR56_RS16190 PF03315 Serine dehydratase beta chain CWR56_RS16195 PF00701 Dihydrodipicolinate synthetase family CWR56_RS16200 PF02774 Semialdehyde dehydrogenase, dimerisation domain CWR56_RS16200 PF01118 Semialdehyde dehydrogenase, NAD binding domain CWR56_RS16205 PF00701 Dihydrodipicolinate synthetase family CWR56_RS16210 PF05173 Dihydrodipicolinate reductase, C-terminus CWR56_RS16210 PF01113 Dihydrodipicolinate reductase, N-terminus CWR56_RS16215 PF14602 Hexapeptide repeat of succinyl-transferase CWR56_RS16215 PF08503 Tetrahydrodipicolinate succinyltransferase N-terminal CWR56_RS16215 PF00132 Bacterial transferase hexapeptide (six repeats) CWR56_RS16225 PF05173 Dihydrodipicolinate reductase, C-terminus CWR56_RS16225 PF01113 Dihydrodipicolinate reductase, N-terminus CWR56_RS16235 PF00156 Phosphoribosyl transferase domain CWR56_RS16240 PF03313 Serine dehydratase alpha chain CWR56_RS16250 PF00158 Sigma-54 interaction domain CWR56_RS16250 PF13188 PAS domain CWR56_RS16250 PF02954 Bacterial regulatory protein, Fis family CWR56_RS16255 PF01209 ubiE/COQ5 methyltransferase family CWR56_RS16270 PF05544 Proline racemase CWR56_RS16280 PF09338 Glycine/sarcosine/betaine reductase component B subunits CWR56_RS16285 PF09338 Glycine/sarcosine/betaine reductase component B subunits CWR56_RS16300 PF09338 Glycine/sarcosine/betaine reductase component B subunits CWR56_RS16310 PF00158 Sigma-54 interaction domain CWR56_RS16310 PF13426 PAS domain CWR56_RS16310 PF02954 Bacterial regulatory protein, Fis family CWR56_RS16320 PF13375 RnfC Barrel sandwich hybrid domain CWR56_RS16320 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CWR56_RS16320 PF10531 SLBB domain CWR56_RS16320 PF13237 4Fe-4S dicluster domain CWR56_RS16330 PF01522 Polysaccharide deacetylase CWR56_RS16335 PF00269 Small, acid-soluble spore proteins, alpha/beta type CWR56_RS16355 PF08245 Mur ligase middle domain CWR56_RS16365 PF04397 LytTr DNA-binding domain CWR56_RS16365 PF00072 Response regulator receiver domain CWR56_RS16370 PF10458 Valyl tRNA synthetase tRNA binding arm CWR56_RS16370 PF00133 tRNA synthetases class I (I, L, M and V) CWR56_RS16370 PF08264 Anticodon-binding domain of tRNA CWR56_RS16380 PF01522 Polysaccharide deacetylase CWR56_RS16395 PF01895 PhoU domain CWR56_RS16400 PF00005 ABC transporter CWR56_RS16405 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS16410 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS16420 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS16420 PF00072 Response regulator receiver domain CWR56_RS16425 PF00672 HAMP domain CWR56_RS16425 PF18698 Histidine kinase sensor domain CWR56_RS16425 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS16425 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS16430 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS16430 PF00072 Response regulator receiver domain CWR56_RS16435 PF12849 PBP superfamily domain CWR56_RS16440 PF01432 Peptidase family M3 CWR56_RS16440 PF08439 Oligopeptidase F CWR56_RS16445 PF02308 MgtC family CWR56_RS16465 PF07664 Ferrous iron transport protein B C terminus CWR56_RS16465 PF17910 FeoB cytosolic helical domain CWR56_RS16465 PF02421 Ferrous iron transport protein B CWR56_RS16465 PF07670 Nucleoside recognition CWR56_RS16470 PF13580 SIS domain CWR56_RS16475 PF03613 PTS system mannose/fructose/sorbose family IID component CWR56_RS16480 PF03609 PTS system sorbose-specific iic component CWR56_RS16485 PF03830 PTS system sorbose subfamily IIB component CWR56_RS16485 PF03610 PTS system fructose IIA component CWR56_RS16490 PF03830 PTS system sorbose subfamily IIB component CWR56_RS16490 PF03610 PTS system fructose IIA component CWR56_RS16495 PF00158 Sigma-54 interaction domain CWR56_RS16495 PF00874 PRD domain CWR56_RS16500 PF03807 NADP oxidoreductase coenzyme F420-dependent CWR56_RS16500 PF14748 Pyrroline-5-carboxylate reductase dimerisation CWR56_RS16505 PF02901 Pyruvate formate lyase-like CWR56_RS16505 PF01228 Glycine radical CWR56_RS16510 PF04055 Radical SAM superfamily CWR56_RS16515 PF13180 PDZ domain CWR56_RS16520 PF00342 Phosphoglucose isomerase CWR56_RS16525 PF02690 Na+/Pi-cotransporter CWR56_RS16545 PF05225 helix-turn-helix, Psq domain CWR56_RS16545 PF02810 SEC-C motif CWR56_RS16565 PF07963 Prokaryotic N-terminal methylation motif CWR56_RS16565 PF00114 Pilin (bacterial filament) CWR56_RS16570 PF00482 Type II secretion system (T2SS), protein F CWR56_RS16575 PF00437 Type II/IV secretion system protein CWR56_RS16575 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CWR56_RS16590 PF07690 Major Facilitator Superfamily CWR56_RS16595 PF01926 50S ribosome-binding GTPase CWR56_RS16600 PF05362 Lon protease (S16) C-terminal proteolytic domain CWR56_RS16600 PF02190 ATP-dependent protease La (LON) substrate-binding domain CWR56_RS16600 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS16610 PF02417 Chromate transporter CWR56_RS16615 PF10431 C-terminal, D2-small domain, of ClpB protein CWR56_RS16615 PF07724 AAA domain (Cdc48 subfamily) CWR56_RS16615 PF06689 ClpX C4-type zinc finger CWR56_RS16620 PF00574 Clp protease CWR56_RS16625 PF00254 FKBP-type peptidyl-prolyl cis-trans isomerase CWR56_RS16625 PF05698 Bacterial trigger factor protein (TF) C-terminus CWR56_RS16625 PF05697 Bacterial trigger factor protein (TF) CWR56_RS16635 PF01138 3' exoribonuclease family, domain 1 CWR56_RS16635 PF03725 3' exoribonuclease family, domain 2 CWR56_RS16640 PF01653 NAD-dependent DNA ligase adenylation domain CWR56_RS16640 PF00533 BRCA1 C Terminus (BRCT) domain CWR56_RS16640 PF03119 NAD-dependent DNA ligase C4 zinc finger domain CWR56_RS16640 PF12826 Helix-hairpin-helix motif CWR56_RS16640 PF03120 NAD-dependent DNA ligase OB-fold domain CWR56_RS16660 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS16660 PF14691 Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster CWR56_RS16660 PF13247 4Fe-4S dicluster domain CWR56_RS16665 PF02906 Iron only hydrogenase large subunit, C-terminal domain CWR56_RS16665 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CWR56_RS16665 PF00037 4Fe-4S binding domain CWR56_RS16665 PF02256 Iron hydrogenase small subunit CWR56_RS16670 PF12800 4Fe-4S binding domain CWR56_RS16670 PF13247 4Fe-4S dicluster domain CWR56_RS16680 PF02634 FdhD/NarQ family CWR56_RS16695 PF00072 Response regulator receiver domain CWR56_RS16695 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS16715 PF00005 ABC transporter CWR56_RS16715 PF13732 Domain of unknown function (DUF4162) CWR56_RS16745 PF04397 LytTr DNA-binding domain CWR56_RS16745 PF00072 Response regulator receiver domain CWR56_RS16775 PF13181 Tetratricopeptide repeat CWR56_RS16775 PF00535 Glycosyl transferase family 2 CWR56_RS16780 PF00574 Clp protease CWR56_RS16785 PF12833 Helix-turn-helix domain CWR56_RS16790 PF00155 Aminotransferase class I and II CWR56_RS16790 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS16800 PF00881 Nitroreductase family CWR56_RS16805 PF01638 HxlR-like helix-turn-helix CWR56_RS16810 PF01965 DJ-1/PfpI family CWR56_RS16815 PF01037 Lrp/AsnC ligand binding domain CWR56_RS16820 PF12848 ABC transporter CWR56_RS16820 PF00005 ABC transporter CWR56_RS16825 PF00072 Response regulator receiver domain CWR56_RS16825 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS16845 PF00005 ABC transporter CWR56_RS16850 PF00563 EAL domain CWR56_RS16850 PF13426 PAS domain CWR56_RS16850 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS16865 PF03193 RsgA GTPase CWR56_RS16890 PF01938 TRAM domain CWR56_RS16890 PF05958 tRNA (Uracil-5-)-methyltransferase CWR56_RS16895 PF02887 Pyruvate kinase, alpha/beta domain CWR56_RS16895 PF00224 Pyruvate kinase, barrel domain CWR56_RS16895 PF00391 PEP-utilising enzyme, mobile domain CWR56_RS16900 PF00365 Phosphofructokinase CWR56_RS16905 PF01336 OB-fold nucleic acid binding domain CWR56_RS16905 PF02811 PHP domain CWR56_RS16905 PF14579 Helix-hairpin-helix motif CWR56_RS16905 PF17657 Bacterial DNA polymerase III alpha subunit finger domain CWR56_RS16905 PF07733 Bacterial DNA polymerase III alpha NTPase domain CWR56_RS16910 PF02650 WhiA C-terminal HTH domain CWR56_RS16910 PF14527 WhiA LAGLIDADG-like domain CWR56_RS16910 PF10298 WhiA N-terminal LAGLIDADG-like domain CWR56_RS16915 PF00293 NUDIX domain CWR56_RS16920 PF01933 Uncharacterised protein family UPF0052 CWR56_RS16925 PF03668 P-loop ATPase protein family CWR56_RS16930 PF02811 PHP domain CWR56_RS16935 PF01565 FAD binding domain CWR56_RS16935 PF02873 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain CWR56_RS16940 PF01226 Formate/nitrite transporter CWR56_RS16945 PF13091 PLD-like domain CWR56_RS16945 PF13396 Phospholipase_D-nuclease N-terminal CWR56_RS16955 PF01512 Respiratory-chain NADH dehydrogenase 51 Kd subunit CWR56_RS16955 PF00037 4Fe-4S binding domain CWR56_RS16955 PF10589 NADH-ubiquinone oxidoreductase-F iron-sulfur binding region CWR56_RS16960 PF10588 NADH-ubiquinone oxidoreductase-G iron-sulfur binding region CWR56_RS16960 PF00037 4Fe-4S binding domain CWR56_RS16960 PF02906 Iron only hydrogenase large subunit, C-terminal domain CWR56_RS16960 PF02256 Iron hydrogenase small subunit CWR56_RS16965 PF05192 MutS domain III CWR56_RS16965 PF05188 MutS domain II CWR56_RS16965 PF01624 MutS domain I CWR56_RS16965 PF05190 MutS family domain IV CWR56_RS16965 PF00488 MutS domain V CWR56_RS16970 PF07475 HPr Serine kinase C-terminal domain CWR56_RS16970 PF02603 HPr Serine kinase N terminus CWR56_RS16975 PF12826 Helix-hairpin-helix motif CWR56_RS16975 PF02151 UvrB/uvrC motif CWR56_RS16975 PF08459 UvrC Helix-hairpin-helix N-terminal CWR56_RS16975 PF01541 GIY-YIG catalytic domain CWR56_RS16980 PF17760 UvrA interaction domain CWR56_RS16980 PF17755 UvrA DNA-binding domain CWR56_RS16985 PF04851 Type III restriction enzyme, res subunit CWR56_RS16985 PF00271 Helicase conserved C-terminal domain CWR56_RS16985 PF17757 UvrB interaction domain CWR56_RS16985 PF02151 UvrB/uvrC motif CWR56_RS16985 PF12344 Ultra-violet resistance protein B CWR56_RS16995 PF13416 Bacterial extracellular solute-binding protein CWR56_RS17000 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS17005 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS17010 PF03459 TOBE domain CWR56_RS17010 PF00005 ABC transporter CWR56_RS17010 PF17912 MalK OB fold domain CWR56_RS17030 PF10414 Sirohaem synthase dimerisation region CWR56_RS17030 PF14824 Sirohaem biosynthesis protein central CWR56_RS17030 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17035 PF00490 Delta-aminolevulinic acid dehydratase CWR56_RS17040 PF02602 Uroporphyrinogen-III synthase HemD CWR56_RS17040 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17045 PF03900 Porphobilinogen deaminase, C-terminal domain CWR56_RS17045 PF01379 Porphobilinogen deaminase, dipyromethane cofactor binding domain CWR56_RS17050 PF06180 Cobalt chelatase (CbiK) CWR56_RS17055 PF02571 Precorrin-6x reductase CbiJ/CobK CWR56_RS17060 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17065 PF11760 Cobalamin synthesis G N-terminal CWR56_RS17065 PF11761 Cobalamin biosynthesis central region CWR56_RS17065 PF01890 Cobalamin synthesis G C-terminus CWR56_RS17070 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17075 PF05175 Methyltransferase small domain CWR56_RS17080 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17085 PF01888 CbiD CWR56_RS17090 PF02570 Precorrin-8X methylmutase CWR56_RS17095 PF00288 GHMP kinases N terminal domain CWR56_RS17100 PF00155 Aminotransferase class I and II CWR56_RS17105 PF03186 CobD/Cbib protein CWR56_RS17110 PF01656 CobQ/CobB/MinD/ParA nucleotide binding domain CWR56_RS17110 PF07685 CobB/CobQ-like glutamine amidotransferase domain CWR56_RS17115 PF07685 CobB/CobQ-like glutamine amidotransferase domain CWR56_RS17120 PF00300 Histidine phosphatase superfamily (branch 1) CWR56_RS17125 PF02654 Cobalamin-5-phosphate synthase CWR56_RS17130 PF02283 Cobinamide kinase / cobinamide phosphate guanyltransferase CWR56_RS17135 PF02277 Phosphoribosyltransferase CWR56_RS17155 PF00155 Aminotransferase class I and II CWR56_RS17160 PF01321 Creatinase/Prolidase N-terminal domain CWR56_RS17160 PF00557 Metallopeptidase family M24 CWR56_RS17165 PF02378 Phosphotransferase system, EIIC CWR56_RS17165 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS17170 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS17175 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CWR56_RS17180 PF05343 M42 glutamyl aminopeptidase CWR56_RS17185 PF00874 PRD domain CWR56_RS17185 PF03123 CAT RNA binding domain CWR56_RS17190 PF01116 Fructose-bisphosphate aldolase class-II CWR56_RS17195 PF01380 SIS domain CWR56_RS17200 PF01408 Oxidoreductase family, NAD-binding Rossmann fold CWR56_RS17205 PF00294 pfkB family carbohydrate kinase CWR56_RS17210 PF07702 UTRA domain CWR56_RS17210 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS17215 PF01979 Amidohydrolase family CWR56_RS17220 PF01471 Putative peptidoglycan binding domain CWR56_RS17220 PF03572 Peptidase family S41 CWR56_RS17220 PF17820 PDZ domain CWR56_RS17225 PF01812 5-formyltetrahydrofolate cyclo-ligase family CWR56_RS17240 PF02779 Transketolase, pyrimidine binding domain CWR56_RS17240 PF02780 Transketolase, C-terminal domain CWR56_RS17245 PF00456 Transketolase, thiamine diphosphate binding domain CWR56_RS17250 PF02452 PemK-like, MazF-like toxin of type II toxin-antitoxin system CWR56_RS17260 PF01168 Alanine racemase, N-terminal domain CWR56_RS17260 PF00842 Alanine racemase, C-terminal domain CWR56_RS17270 PF00478 IMP dehydrogenase / GMP reductase domain CWR56_RS17270 PF00571 CBS domain CWR56_RS17275 PF01648 4'-phosphopantetheinyl transferase superfamily CWR56_RS17280 PF00401 ATP synthase, Delta/Epsilon chain, long alpha-helix domain CWR56_RS17280 PF02823 ATP synthase, Delta/Epsilon chain, beta-sandwich domain CWR56_RS17285 PF02874 ATP synthase alpha/beta family, beta-barrel domain CWR56_RS17285 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CWR56_RS17290 PF00231 ATP synthase CWR56_RS17295 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CWR56_RS17295 PF02874 ATP synthase alpha/beta family, beta-barrel domain CWR56_RS17295 PF00306 ATP synthase alpha/beta chain, C terminal domain CWR56_RS17300 PF00213 ATP synthase delta (OSCP) subunit CWR56_RS17305 PF00430 ATP synthase B/B' CF(0) CWR56_RS17310 PF00137 ATP synthase subunit C CWR56_RS17315 PF00119 ATP synthase A chain CWR56_RS17340 PF02625 XdhC and CoxI family CWR56_RS17340 PF13478 XdhC Rossmann domain CWR56_RS17350 PF02502 Ribose/Galactose Isomerase CWR56_RS17355 PF01451 Low molecular weight phosphotyrosine protein phosphatase CWR56_RS17360 PF03481 Putative GTP-binding controlling metal-binding CWR56_RS17360 PF01300 Telomere recombination CWR56_RS17370 PF00472 RF-1 domain CWR56_RS17370 PF03462 PCRF domain CWR56_RS17375 PF17827 PrmC N-terminal domain CWR56_RS17375 PF05175 Methyltransferase small domain CWR56_RS17380 PF07136 Protein of unknown function (DUF1385) CWR56_RS17385 PF01197 Ribosomal protein L31 CWR56_RS17390 PF07498 Rho termination factor, N-terminal domain CWR56_RS17390 PF07497 Rho termination factor, RNA-binding domain CWR56_RS17390 PF00006 ATP synthase alpha/beta family, nucleotide-binding domain CWR56_RS17395 PF00483 Nucleotidyl transferase CWR56_RS17400 PF01432 Peptidase family M3 CWR56_RS17400 PF08439 Oligopeptidase F CWR56_RS17405 PF07228 Stage II sporulation protein E (SpoIIE) CWR56_RS17410 PF02541 Ppx/GppA phosphatase family CWR56_RS17430 PF01479 S4 domain CWR56_RS17435 PF00216 Bacterial DNA-binding protein CWR56_RS17440 PF03819 MazG nucleotide pyrophosphohydrolase domain CWR56_RS17440 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17445 PF14667 Polysaccharide biosynthesis C-terminal domain CWR56_RS17445 PF01943 Polysaccharide biosynthesis protein CWR56_RS17450 PF15714 Stage V sporulation protein T C-terminal, transcription factor CWR56_RS17450 PF04014 Antidote-toxin recognition MazE, bacterial antitoxin CWR56_RS17455 PF05698 Bacterial trigger factor protein (TF) C-terminus CWR56_RS17460 PF02559 CarD-like/TRCF domain CWR56_RS17460 PF17757 UvrB interaction domain CWR56_RS17460 PF03461 TRCF domain CWR56_RS17460 PF00271 Helicase conserved C-terminal domain CWR56_RS17460 PF00270 DEAD/DEAH box helicase CWR56_RS17465 PF01195 Peptidyl-tRNA hydrolase CWR56_RS17475 PF06750 Bacterial Peptidase A24 N-terminal domain CWR56_RS17475 PF01478 Type IV leader peptidase family CWR56_RS17480 PF00437 Type II/IV secretion system protein CWR56_RS17510 PF00482 Type II secretion system (T2SS), protein F CWR56_RS17515 PF05157 Type II secretion system (T2SS), protein E, N-terminal domain CWR56_RS17515 PF00437 Type II/IV secretion system protein CWR56_RS17525 PF13793 N-terminal domain of ribose phosphate pyrophosphokinase CWR56_RS17525 PF14572 Phosphoribosyl synthetase-associated domain CWR56_RS17530 PF00483 Nucleotidyl transferase CWR56_RS17530 PF00132 Bacterial transferase hexapeptide (six repeats) CWR56_RS17530 PF14602 Hexapeptide repeat of succinyl-transferase CWR56_RS17535 PF04026 SpoVG CWR56_RS17540 PF09182 Bacterial purine repressor, N-terminal CWR56_RS17540 PF00156 Phosphoribosyl transferase domain CWR56_RS17545 PF02875 Mur ligase family, glutamate ligase domain CWR56_RS17545 PF01225 Mur ligase family, catalytic domain CWR56_RS17545 PF08245 Mur ligase middle domain CWR56_RS17555 PF01545 Cation efflux family CWR56_RS17555 PF16916 Dimerisation domain of Zinc Transporter CWR56_RS17560 PF01546 Peptidase family M20/M25/M40 CWR56_RS17560 PF07687 Peptidase dimerisation domain CWR56_RS17570 PF00398 Ribosomal RNA adenine dimethylase CWR56_RS17575 PF13331 Domain of unknown function (DUF4093) CWR56_RS17575 PF01751 Toprim domain CWR56_RS17595 PF00528 Binding-protein-dependent transport system inner membrane component CWR56_RS17600 PF00005 ABC transporter CWR56_RS17605 PF02811 PHP domain CWR56_RS17610 PF07969 Amidohydrolase family CWR56_RS17615 PF00005 ABC transporter CWR56_RS17620 PF00005 ABC transporter CWR56_RS17625 PF06007 Phosphonate metabolism protein PhnJ CWR56_RS17630 PF05861 Bacterial phosphonate metabolism protein (PhnI) CWR56_RS17645 PF01026 TatD related DNase CWR56_RS17650 PF08264 Anticodon-binding domain of tRNA CWR56_RS17650 PF09334 tRNA synthetases class I (M) CWR56_RS17650 PF01588 Putative tRNA binding domain CWR56_RS17655 PF07670 Nucleoside recognition CWR56_RS17665 PF17956 Nicotinate phosphoribosyltransferase C-terminal domain CWR56_RS17665 PF04095 Nicotinate phosphoribosyltransferase (NAPRTase) family CWR56_RS17665 PF17767 Nicotinate phosphoribosyltransferase (NAPRTase) N-terminal domain CWR56_RS17670 PF01037 Lrp/AsnC ligand binding domain CWR56_RS17675 PF12627 Probable RNA and SrmB- binding site of polymerase A CWR56_RS17675 PF01743 Poly A polymerase head domain CWR56_RS17675 PF01966 HD domain CWR56_RS17680 PF00590 Tetrapyrrole (Corrin/Porphyrin) Methylases CWR56_RS17685 PF05175 Methyltransferase small domain CWR56_RS17690 PF04468 PSP1 C-terminal conserved region CWR56_RS17695 PF09115 DNA polymerase III, delta subunit, C terminal CWR56_RS17700 PF02223 Thymidylate kinase CWR56_RS17705 PF03711 Orn/Lys/Arg decarboxylase, C-terminal domain CWR56_RS17705 PF01276 Orn/Lys/Arg decarboxylase, major domain CWR56_RS17710 PF04070 Domain of unknown function (DUF378) CWR56_RS17735 PF00152 tRNA synthetases class II (D, K and N) CWR56_RS17735 PF01336 OB-fold nucleic acid binding domain CWR56_RS17740 PF03449 Transcription elongation factor, N-terminal CWR56_RS17740 PF01272 Transcription elongation factor, GreA/GreB, C-term CWR56_RS17745 PF01207 Dihydrouridine synthase (Dus) CWR56_RS17750 PF03309 Type III pantothenate kinase CWR56_RS17760 PF03576 Peptidase family S58 CWR56_RS17765 PF03099 Biotin/lipoate A/B protein ligase family CWR56_RS17765 PF02237 Biotin protein ligase C terminal domain CWR56_RS17765 PF08279 HTH domain CWR56_RS17770 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS17770 PF17862 AAA+ lid domain CWR56_RS17770 PF01434 Peptidase family M41 CWR56_RS17775 PF01171 PP-loop family CWR56_RS17775 PF11734 TilS substrate C-terminal domain CWR56_RS17785 PF01177 Asp/Glu/Hydantoin racemase CWR56_RS17790 PF07486 Cell Wall Hydrolase CWR56_RS17790 PF01471 Putative peptidoglycan binding domain CWR56_RS17795 PF09551 Stage II sporulation protein R (spore_II_R) CWR56_RS17800 PF07729 FCD domain CWR56_RS17800 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS17805 PF08544 GHMP kinases C terminal CWR56_RS17805 PF00288 GHMP kinases N terminal domain CWR56_RS17820 PF05582 YabG peptidase U57 CWR56_RS17835 PF02810 SEC-C motif CWR56_RS17835 PF07517 SecA DEAD-like domain CWR56_RS17835 PF01043 SecA preprotein cross-linking domain CWR56_RS17835 PF07516 SecA Wing and Scaffold domain CWR56_RS17860 PF07690 Major Facilitator Superfamily CWR56_RS17865 PF01053 Cys/Met metabolism PLP-dependent enzyme CWR56_RS17870 PF02796 Helix-turn-helix domain of resolvase CWR56_RS17870 PF00239 Resolvase, N terminal domain CWR56_RS17885 PF10672 S-adenosylmethionine-dependent methyltransferase CWR56_RS17890 PF01479 S4 domain CWR56_RS17890 PF00849 RNA pseudouridylate synthase CWR56_RS17895 PF13411 MerR HTH family regulatory protein CWR56_RS17895 PF06445 GyrI-like small molecule binding domain CWR56_RS17905 PF02687 FtsX-like permease family CWR56_RS17905 PF00005 ABC transporter CWR56_RS17905 PF12704 MacB-like periplasmic core domain CWR56_RS17910 PF00989 PAS fold CWR56_RS17910 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS17910 PF00672 HAMP domain CWR56_RS17910 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS17910 PF18698 Histidine kinase sensor domain CWR56_RS17915 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS17915 PF00072 Response regulator receiver domain CWR56_RS17920 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CWR56_RS17920 PF02142 MGS-like domain CWR56_RS17920 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CWR56_RS17925 PF00117 Glutamine amidotransferase class-I CWR56_RS17925 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CWR56_RS17930 PF02142 MGS-like domain CWR56_RS17930 PF02787 Carbamoyl-phosphate synthetase large chain, oligomerisation domain CWR56_RS17930 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CWR56_RS17935 PF00117 Glutamine amidotransferase class-I CWR56_RS17935 PF00988 Carbamoyl-phosphate synthase small chain, CPSase domain CWR56_RS17940 PF00215 Orotidine 5'-phosphate decarboxylase / HUMPS family CWR56_RS17955 PF02073 Thermophilic metalloprotease (M29) CWR56_RS17960 PF02574 Homocysteine S-methyltransferase CWR56_RS17960 PF02965 Vitamin B12 dependent methionine synthase, activation domain CWR56_RS17960 PF02607 B12 binding domain CWR56_RS17960 PF02310 B12 binding domain CWR56_RS17960 PF00809 Pterin binding enzyme CWR56_RS17970 PF02664 S-Ribosylhomocysteinase (LuxS) CWR56_RS17975 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS17975 PF00512 His Kinase A (phospho-acceptor) domain CWR56_RS17980 PF00486 Transcriptional regulatory protein, C terminal CWR56_RS17980 PF00072 Response regulator receiver domain CWR56_RS17985 PF02557 D-alanyl-D-alanine carboxypeptidase CWR56_RS17990 PF01171 PP-loop family CWR56_RS17995 PF10518 TAT (twin-arginine translocation) pathway signal sequence CWR56_RS17995 PF00149 Calcineurin-like phosphoesterase CWR56_RS18000 PF01370 NAD dependent epimerase/dehydratase family CWR56_RS18005 PF13419 Haloacid dehalogenase-like hydrolase CWR56_RS18015 PF01979 Amidohydrolase family CWR56_RS18025 PF12857 TOBE-like domain CWR56_RS18025 PF00005 ABC transporter CWR56_RS18035 PF00903 Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily CWR56_RS18040 PF01554 MatE CWR56_RS18055 PF13411 MerR HTH family regulatory protein CWR56_RS18055 PF06445 GyrI-like small molecule binding domain CWR56_RS18060 PF00999 Sodium/hydrogen exchanger family CWR56_RS18060 PF03471 Transporter associated domain CWR56_RS18060 PF02080 TrkA-C domain CWR56_RS18065 PF10026 Predicted Zn-dependent protease (DUF2268) CWR56_RS18075 PF00117 Glutamine amidotransferase class-I CWR56_RS18075 PF13673 Acetyltransferase (GNAT) domain CWR56_RS18075 PF03352 Methyladenine glycosylase CWR56_RS18075 PF00958 GMP synthase C terminal domain CWR56_RS18075 PF13302 Acetyltransferase (GNAT) domain CWR56_RS18085 PF00805 Pentapeptide repeats (8 copies) CWR56_RS18090 PF08274 PhnA Zinc-Ribbon CWR56_RS18090 PF03831 PhnA domain CWR56_RS18095 PF12704 MacB-like periplasmic core domain CWR56_RS18095 PF02687 FtsX-like permease family CWR56_RS18095 PF00005 ABC transporter CWR56_RS18105 PF00990 Diguanylate cyclase, GGDEF domain CWR56_RS18105 PF05231 MASE1 CWR56_RS18105 PF08447 PAS fold CWR56_RS18105 PF00563 EAL domain CWR56_RS18105 PF08448 PAS fold CWR56_RS18105 PF13426 PAS domain CWR56_RS18110 PF02581 Thiamine monophosphate synthase CWR56_RS18115 PF00701 Dihydrodipicolinate synthetase family CWR56_RS18120 PF01380 SIS domain CWR56_RS18120 PF00571 CBS domain CWR56_RS18130 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS18150 PF13411 MerR HTH family regulatory protein CWR56_RS18180 PF00126 Bacterial regulatory helix-turn-helix protein, lysR family CWR56_RS18180 PF03466 LysR substrate binding domain CWR56_RS18185 PF00294 pfkB family carbohydrate kinase CWR56_RS18190 PF07071 KDGP aldolase CWR56_RS18195 PF03841 L-seryl-tRNA selenium transferase CWR56_RS18200 PF01979 Amidohydrolase family CWR56_RS18210 PF02378 Phosphotransferase system, EIIC CWR56_RS18215 PF07702 UTRA domain CWR56_RS18215 PF00392 Bacterial regulatory proteins, gntR family CWR56_RS18220 PF02255 PTS system, Lactose/Cellobiose specific IIA subunit CWR56_RS18225 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS18250 PF02590 Predicted SPOUT methyltransferase CWR56_RS18255 PF02378 Phosphotransferase system, EIIC CWR56_RS18260 PF00753 Metallo-beta-lactamase superfamily CWR56_RS18275 PF01695 IstB-like ATP binding protein CWR56_RS18300 PF00709 Adenylosuccinate synthetase CWR56_RS18310 PF00772 DnaB-like helicase N terminal domain CWR56_RS18310 PF03796 DnaB-like helicase C terminal domain CWR56_RS18315 PF03948 Ribosomal protein L9, C-terminal domain CWR56_RS18315 PF01281 Ribosomal protein L9, N-terminal domain CWR56_RS18320 PF01368 DHH family CWR56_RS18320 PF02272 DHHA1 domain CWR56_RS18335 PF01084 Ribosomal protein S18 CWR56_RS18340 PF00436 Single-strand binding protein family CWR56_RS18345 PF01250 Ribosomal protein S6 CWR56_RS18350 PF00155 Aminotransferase class I and II CWR56_RS18365 PF01206 Sulfurtransferase TusA CWR56_RS18380 PF00266 Aminotransferase class-V CWR56_RS18385 PF02195 ParB-like nuclease domain CWR56_RS18385 PF17762 HTH domain found in ParB protein CWR56_RS18390 PF13614 AAA domain CWR56_RS18395 PF02195 ParB-like nuclease domain CWR56_RS18395 PF17762 HTH domain found in ParB protein CWR56_RS18400 PF02527 rRNA small subunit methyltransferase G CWR56_RS18405 PF01134 Glucose inhibited division protein A CWR56_RS18405 PF13932 GidA associated domain CWR56_RS18410 PF12631 MnmE helical domain CWR56_RS18410 PF10396 GTP-binding protein TrmE N-terminus CWR56_RS18410 PF01926 50S ribosome-binding GTPase CWR56_RS18415 PF14804 Jag N-terminus CWR56_RS18415 PF01424 R3H domain CWR56_RS18420 PF02096 60Kd inner membrane protein CWR56_RS18425 PF01809 Putative membrane protein insertion efficiency factor CWR56_RS18430 PF00825 Ribonuclease P CWR56_RS18435 PF00468 Ribosomal protein L34 CWR56_RS18440 PF11638 DnaA N-terminal domain CWR56_RS18440 PF08299 Bacterial dnaA protein helix-turn-helix CWR56_RS18440 PF00308 Bacterial dnaA protein CWR56_RS18445 PF00712 DNA polymerase III beta subunit, N-terminal domain CWR56_RS18445 PF02767 DNA polymerase III beta subunit, central domain CWR56_RS18445 PF02768 DNA polymerase III beta subunit, C-terminal domain CWR56_RS18455 PF02463 RecF/RecN/SMC N terminal domain CWR56_RS18460 PF01751 Toprim domain CWR56_RS18460 PF02518 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase CWR56_RS18460 PF00986 DNA gyrase B subunit, carboxyl terminus CWR56_RS18460 PF00204 DNA gyrase B CWR56_RS18465 PF03989 DNA gyrase C-terminal domain, beta-propeller CWR56_RS18465 PF00521 DNA gyrase/topoisomerase IV, subunit A CWR56_RS18480 PF01740 STAS domain CWR56_RS18485 PF13581 Histidine kinase-like ATPase domain CWR56_RS18490 PF04539 Sigma-70 region 3 CWR56_RS18490 PF04542 Sigma-70 region 2 CWR56_RS18490 PF04545 Sigma-70, region 4 CWR56_RS18540 PF08279 HTH domain CWR56_RS18540 PF02829 3H domain CWR56_RS18545 PF05552 Conserved TM helix CWR56_RS18545 PF00924 Mechanosensitive ion channel CWR56_RS18550 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CWR56_RS18550 PF02403 Seryl-tRNA synthetase N-terminal domain CWR56_RS18555 PF14437 MafB19-like deaminase CWR56_RS18570 PF12169 DNA polymerase III subunits gamma and tau domain III CWR56_RS18575 PF02575 YbaB/EbfC DNA-binding family CWR56_RS18580 PF13662 Toprim domain CWR56_RS18580 PF02132 RecR protein CWR56_RS18590 PF00534 Glycosyl transferases group 1 CWR56_RS18590 PF06925 Monogalactosyldiacylglycerol (MGDG) synthase CWR56_RS18830 PF02436 Conserved carboxylase domain CWR56_RS18830 PF00682 HMGL-like CWR56_RS18830 PF02786 Carbamoyl-phosphate synthase L chain, ATP binding domain CWR56_RS18830 PF00364 Biotin-requiring enzyme CWR56_RS18830 PF00289 Biotin carboxylase, N-terminal domain CWR56_RS18830 PF02785 Biotin carboxylase C-terminal domain CWR56_RS18835 PF00679 Elongation factor G C-terminus CWR56_RS18835 PF03764 Elongation factor G, domain IV CWR56_RS18835 PF14492 Elongation Factor G, domain II CWR56_RS18835 PF03144 Elongation factor Tu domain 2 CWR56_RS18835 PF00009 Elongation factor Tu GTP binding domain CWR56_RS18840 PF05848 CtsR N-terminal HTH domain CWR56_RS18840 PF17727 CtsR C-terminal dimerization domain CWR56_RS18845 PF02151 UvrB/uvrC motif CWR56_RS18850 PF00217 ATP:guanido phosphotransferase, C-terminal catalytic domain CWR56_RS18855 PF10431 C-terminal, D2-small domain, of ClpB protein CWR56_RS18855 PF02861 Clp amino terminal domain, pathogenicity island component CWR56_RS18855 PF17871 AAA lid domain CWR56_RS18855 PF00004 ATPase family associated with various cellular activities (AAA) CWR56_RS18855 PF07724 AAA domain (Cdc48 subfamily) CWR56_RS18860 PF18073 Rubredoxin metal binding domain CWR56_RS18865 PF02457 DisA bacterial checkpoint controller nucleotide-binding CWR56_RS18865 PF10635 DisA bacterial checkpoint controller linker region CWR56_RS18890 PF04616 Glycosyl hydrolases family 43 CWR56_RS18890 PF17851 Beta xylosidase C-terminal Concanavalin A-like domain CWR56_RS18900 PF04198 Putative sugar-binding domain CWR56_RS18905 PF00676 Dehydrogenase E1 component CWR56_RS18910 PF02780 Transketolase, C-terminal domain CWR56_RS18910 PF02779 Transketolase, pyrimidine binding domain CWR56_RS18915 PF02817 e3 binding domain CWR56_RS18915 PF00364 Biotin-requiring enzyme CWR56_RS18915 PF00198 2-oxoacid dehydrogenases acyltransferase (catalytic domain) CWR56_RS18920 PF02852 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CWR56_RS18920 PF07992 Pyridine nucleotide-disulphide oxidoreductase CWR56_RS18925 PF00158 Sigma-54 interaction domain CWR56_RS18925 PF03610 PTS system fructose IIA component CWR56_RS18925 PF00874 PRD domain CWR56_RS18935 PF02302 PTS system, Lactose/Cellobiose specific IIB subunit CWR56_RS18940 PF03611 PTS system sugar-specific permease component CWR56_RS18950 PF00596 Class II Aldolase and Adducin N-terminal domain CWR56_RS18955 PF03099 Biotin/lipoate A/B protein ligase family CWR56_RS18955 PF10437 Bacterial lipoate protein ligase C-terminus CWR56_RS18960 PF01128 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CWR56_RS18965 PF02542 YgbB family CWR56_RS18970 PF04073 Aminoacyl-tRNA editing domain CWR56_RS18970 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CWR56_RS18970 PF03129 Anticodon binding domain CWR56_RS18975 PF03129 Anticodon binding domain CWR56_RS18975 PF00587 tRNA synthetase class II core domain (G, H, P, S and T) CWR56_RS18975 PF09180 Prolyl-tRNA synthetase, C-terminal CWR56_RS18980 PF00749 tRNA synthetases class I (E and Q), catalytic domain CWR56_RS18990 PF01406 tRNA synthetases class I (C) catalytic domain CWR56_RS18990 PF09190 DALR domain CWR56_RS18995 PF00636 Ribonuclease III domain CWR56_RS19000 PF02511 Thymidylate synthase complementing protein CWR56_RS19005 PF00588 SpoU rRNA Methylase family CWR56_RS19005 PF08032 RNA 2'-O ribose methyltransferase substrate binding CWR56_RS19010 PF05991 YacP-like NYN domain CWR56_RS19015 PF08281 Sigma-70, region 4 CWR56_RS19015 PF04542 Sigma-70 region 2 CWR56_RS19020 PF03144 Elongation factor Tu domain 2 CWR56_RS19020 PF00009 Elongation factor Tu GTP binding domain CWR56_RS19020 PF03143 Elongation factor Tu C-terminal domain