locus-tag	class	description
RSJ9_RS00135	COG0127	Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA RNA and avoiding chromosomal lesions
RSJ9_RS00150	COG0747	negative chemotaxis
RSJ9_RS00185	COG0210	DNA helicase
RSJ9_RS00190	COG4496	protein, YerC YecD
RSJ9_RS00195	COG1187	pseudouridine synthase activity
RSJ9_RS00200	COG0741	lytic transglycosylase activity
RSJ9_RS00215	COG1671	Belongs to the UPF0178 family
RSJ9_RS00230	COG1309	transcriptional regulator
RSJ9_RS00240	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RSJ9_RS00255	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
RSJ9_RS00260	COG2086	electron transfer activity
RSJ9_RS00265	COG1960	acyl-CoA dehydrogenase activity
RSJ9_RS00290	COG0318	PFAM AMP-dependent synthetase and ligase
RSJ9_RS00295	COG1114	Component of the transport system for branched-chain amino acids
RSJ9_RS00305	COG0517	IMP dehydrogenase activity
RSJ9_RS00305	COG0516	GMP reductase activity
RSJ9_RS00310	COG0037	tRNA processing
RSJ9_RS00330	COG0398	Pfam SNARE associated Golgi protein
RSJ9_RS00360	COG0488	(ABC) transporter
RSJ9_RS00365	COG3279	Response regulator of the LytR AlgR family
RSJ9_RS00370	COG3275	phosphorelay sensor kinase activity
RSJ9_RS00375	COG1966	Carbon starvation protein
RSJ9_RS00385	COG1038	Catalyzes a 2-step reaction, involving the ATP-dependent carboxylation of the covalently attached biotin in the first step and the transfer of the carboxyl group to pyruvate in the second
RSJ9_RS00400	COG0446	pyridine nucleotide-disulphide oxidoreductase
RSJ9_RS00425	COG2206	PFAM metal-dependent phosphohydrolase, HD sub domain
RSJ9_RS00430	COG0802	atpase or kinase
RSJ9_RS00435	COG1214	PFAM Peptidase M22, glycoprotease
RSJ9_RS00440	COG0456	acetyltransferase
RSJ9_RS00475	COG4108	Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF- 1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP
RSJ9_RS00480	COG0561	phosphatase activity
RSJ9_RS00495	COG2033	superoxide reductase activity
RSJ9_RS00505	COG3459	Glycosyltransferase 36 associated
RSJ9_RS00520	COG1362	aminopeptidase activity
RSJ9_RS00525	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
RSJ9_RS00535	COG3973	AAA domain
RSJ9_RS00540	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RSJ9_RS00545	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RSJ9_RS00550	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
RSJ9_RS00555	COG2827	Endonuclease containing a URI domain
RSJ9_RS00565	COG1131	(ABC) transporter
RSJ9_RS00575	COG1595	DNA-templated transcription, initiation
RSJ9_RS00580	COG0659	secondary active sulfate transmembrane transporter activity
RSJ9_RS00600	COG1131	(ABC) transporter
RSJ9_RS00620	COG2971	BadF BadG BcrA BcrD
RSJ9_RS00625	COG1447	Phosphotransferase system cellobiose-specific component IIA
RSJ9_RS00635	COG3933	PFAM sigma-54 factor interaction domain-containing protein
RSJ9_RS00635	COG1221	Transcriptional regulators containing an AAA-type ATPase domain and a DNA-binding domain
RSJ9_RS00640	COG1455	protein-N(PI)-phosphohistidine-lactose phosphotransferase system transporter activity
RSJ9_RS00645	COG1486	melibiose metabolic process
RSJ9_RS00650	COG5001	Diguanylate cyclase
RSJ9_RS00650	COG4251	negative regulation of phosphorylation
RSJ9_RS00650	COG2203	Gaf domain
RSJ9_RS00650	COG3706	GGDEF domain
RSJ9_RS00655	COG4974	Belongs to the 'phage' integrase family
RSJ9_RS00670	COG5566	PFAM Mor transcription activator
RSJ9_RS00695	COG0469	pyruvate kinase activity
RSJ9_RS00715	COG0391	Required for morphogenesis under gluconeogenic growth conditions
RSJ9_RS00740	COG1988	membrane-bound metal-dependent
RSJ9_RS00750	COG0768	penicillin binding
RSJ9_RS00760	COG1716	ATPase activity
RSJ9_RS00775	COG0750	zinc metalloprotease
RSJ9_RS00780	COG3409	Peptidoglycan-binding domain 1 protein
RSJ9_RS00780	COG0793	Belongs to the peptidase S41A family
RSJ9_RS00785	COG2177	Part of the ABC transporter FtsEX involved in
RSJ9_RS00790	COG2884	Cell division ATP-binding protein ftsE
RSJ9_RS00795	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
RSJ9_RS00805	COG3958	Transketolase
RSJ9_RS00810	COG3959	Transketolase, thiamine diphosphate binding domain
RSJ9_RS00825	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RSJ9_RS00835	COG0062	Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration
RSJ9_RS00835	COG0063	ADP-dependent NAD(P)H-hydrate dehydratase activity
RSJ9_RS00855	COG1295	ribonuclease BN
RSJ9_RS00875	COG0671	phosphoesterase, PA-phosphatase related
RSJ9_RS00890	COG0789	Transcriptional regulator
RSJ9_RS00900	COG0449	glutamine-fructose-6-phosphate transaminase (isomerizing) activity
RSJ9_RS00905	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RSJ9_RS00910	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RSJ9_RS00915	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS00925	COG3732	PTS system glucitol sorbitol-specific
RSJ9_RS00940	COG1063	alcohol dehydrogenase
RSJ9_RS00965	COG1014	Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin
RSJ9_RS00965	COG0674	pyruvate-flavodoxin oxidoreductase activity
RSJ9_RS00985	COG0280	phosphate acetyltransferase
RSJ9_RS00990	COG3426	butyrate kinase activity
RSJ9_RS00995	COG2509	5-formyltetrahydrofolate cyclo-ligase activity
RSJ9_RS01005	COG1624	Catalyzes the condensation of 2 ATP molecules into cyclic di-AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria
RSJ9_RS01010	COG3773	Cell wall hydrolase
RSJ9_RS01020	COG0492	ferredoxin-NADP+ reductase activity
RSJ9_RS01025	COG3118	belongs to the thioredoxin family
RSJ9_RS01030	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
RSJ9_RS01045	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RSJ9_RS01050	COG3829	transcription factor binding
RSJ9_RS01050	COG3290	protein histidine kinase activity
RSJ9_RS01065	COG1838	Catalyzes the reversible hydration of fumarate to (S)- malate
RSJ9_RS01065	COG1951	Catalyzes the reversible hydration of fumarate to (S)- malate
RSJ9_RS01070	COG0860	N-Acetylmuramoyl-L-alanine amidase
RSJ9_RS01075	COG1283	sodium-dependent phosphate transmembrane transporter activity
RSJ9_RS01090	COG0101	tRNA pseudouridine synthase activity
RSJ9_RS01095	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
RSJ9_RS01105	COG1122	ATPase activity
RSJ9_RS01135	COG0257	Belongs to the bacterial ribosomal protein bL36 family
RSJ9_RS01290	COG1358	cellular component organization or biogenesis
RSJ9_RS01365	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RSJ9_RS01385	COG1171	Catalyzes the anaerobic formation of alpha-ketobutyrate and ammonia from threonine in a two-step reaction. The first step involved a dehydration of threonine and a production of enamine intermediates (aminocrotonate), which tautomerizes to its imine form (iminobutyrate). Both intermediates are unstable and short- lived. The second step is the nonenzymatic hydrolysis of the enamine imine intermediates to form 2-ketobutyrate and free ammonia. In the low water environment of the cell, the second step is accelerated by RidA
RSJ9_RS01400	COG4956	integral membrane protein (PIN domain superfamily)
RSJ9_RS01415	COG1066	DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function
RSJ9_RS01420	COG0542	response to heat
RSJ9_RS01425	COG3869	Catalyzes the specific phosphorylation of arginine residues in
RSJ9_RS01430	COG3880	PFAM UvrB UvrC protein
RSJ9_RS01445	COG0480	Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome
RSJ9_RS01515	COG0423	glycine-tRNA ligase activity
RSJ9_RS01535	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RSJ9_RS01550	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RSJ9_RS01555	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
RSJ9_RS01565	COG2208	phosphoserine phosphatase activity
RSJ9_RS01615	COG1098	S1 RNA binding domain
RSJ9_RS01635	COG1188	Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit, (S4 paralog))
RSJ9_RS01645	COG3956	TIGRFAM MazG family protein
RSJ9_RS01650	COG2244	polysaccharide biosynthetic process
RSJ9_RS01655	COG2002	toxin-antitoxin pair type II binding
RSJ9_RS01665	COG1197	Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site
RSJ9_RS01670	COG0193	aminoacyl-tRNA hydrolase activity
RSJ9_RS01675	COG0265	Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
RSJ9_RS01680	COG5002	protein histidine kinase activity
RSJ9_RS01685	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS01705	COG0503	Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis
RSJ9_RS01730	COG0637	HAD-superfamily hydrolase subfamily IA, variant 3
RSJ9_RS01745	COG1242	4 iron, 4 sulfur cluster binding
RSJ9_RS01755	COG3949	Membrane
RSJ9_RS01765	COG0840	transmembrane signaling receptor activity
RSJ9_RS01780	COG0652	PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides
RSJ9_RS01790	COG0174	glutamine synthetase
RSJ9_RS01805	COG1235	May be involved in the transport of PQQ or its precursor to the periplasm
RSJ9_RS01815	COG0653	protein targeting
RSJ9_RS01835	COG2814	Major facilitator Superfamily
RSJ9_RS01845	COG1309	transcriptional regulator
RSJ9_RS01855	COG0024	Methionine aminopeptidase
RSJ9_RS01860	COG0778	Nitroreductase
RSJ9_RS01865	COG1328	CTP reductase activity
RSJ9_RS01870	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RSJ9_RS01880	COG0502	Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical- based mechanism
RSJ9_RS01890	COG1160	GTP binding
RSJ9_RS01900	COG0438	transferase activity, transferring glycosyl groups
RSJ9_RS01905	COG0613	PHP domain protein
RSJ9_RS01920	COG0583	DNA-binding transcription factor activity
RSJ9_RS01925	COG1404	Belongs to the peptidase S8 family
RSJ9_RS01930	COG0583	DNA-binding transcription factor activity
RSJ9_RS01940	COG0825	malonyl-CoA metabolic process
RSJ9_RS01950	COG0439	Biotin carboxylase
RSJ9_RS01960	COG0511	ligase activity, forming carbon-carbon bonds
RSJ9_RS01965	COG0304	beta-ketoacyl-acyl-carrier-protein synthase II activity
RSJ9_RS01970	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS01975	COG0331	[acyl-carrier-protein] S-malonyltransferase activity
RSJ9_RS01985	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RSJ9_RS02005	COG0739	heme binding
RSJ9_RS02085	COG2081	HI0933 family
RSJ9_RS02100	COG0104	Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP
RSJ9_RS02115	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RSJ9_RS02120	COG0305	Participates in initiation and elongation during chromosome replication
RSJ9_RS02125	COG0470	DNA polymerase III
RSJ9_RS02125	COG1067	ATP-dependent peptidase activity
RSJ9_RS02135	COG3887	signaling protein consisting of a modified GGDEF domain and a DHH domain
RSJ9_RS02165	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
RSJ9_RS02175	COG0668	transmembrane transport
RSJ9_RS02190	COG0628	permease
RSJ9_RS02210	COG1475	DNA binding
RSJ9_RS02215	COG1192	Involved in chromosome partitioning
RSJ9_RS02220	COG1475	DNA binding
RSJ9_RS02240	COG1847	R3H domain protein
RSJ9_RS02270	COG0592	DNA-directed DNA polymerase activity
RSJ9_RS02290	COG0187	DNA topoisomerase II activity
RSJ9_RS02295	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
RSJ9_RS02330	COG1827	regulation of RNA biosynthetic process
RSJ9_RS02335	COG2006	4fe-4S ferredoxin, iron-sulfur binding domain protein
RSJ9_RS02410	COG1131	(ABC) transporter
RSJ9_RS02455	COG0626	cystathionine gamma-synthase activity
RSJ9_RS02475	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
RSJ9_RS02505	COG2816	NAD+ diphosphatase activity
RSJ9_RS02525	COG1179	involved in molybdopterin and THIamine biosynthesis family 1
RSJ9_RS02535	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RSJ9_RS02650	COG0760	Chaperone involved in the correct folding and assembly of outer membrane proteins. Recognizes specific patterns of aromatic residues and the orientation of their side chains, which are found more frequently in integral outer membrane proteins. May act in both early periplasmic and late outer membrane-associated steps of protein maturation
RSJ9_RS02670	COG0846	NAD-dependent lysine deacetylase and desuccinylase that specifically removes acetyl and succinyl groups on target proteins. Modulates the activities of several proteins which are inactive in their acylated form
RSJ9_RS02680	COG1619	proteins homologs of microcin C7 resistance protein MccF
RSJ9_RS02705	COG1982	Orn Lys Arg decarboxylase major
RSJ9_RS02715	COG3870	Protein conserved in bacteria
RSJ9_RS02720	COG2812	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity
RSJ9_RS02725	COG1774	PSP1 C-terminal conserved region
RSJ9_RS02740	COG4123	Specifically methylates the adenine in position 37 of tRNA(1)(Val) (anticodon cmo5UAC)
RSJ9_RS02745	COG0313	Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA
RSJ9_RS02750	COG0791	NLP P60 protein
RSJ9_RS02755	COG2002	toxin-antitoxin pair type II binding
RSJ9_RS02770	COG0245	2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity
RSJ9_RS02780	COG0726	polysaccharide deacetylase
RSJ9_RS02790	COG2715	membrane protein required for spore maturation
RSJ9_RS02795	COG0700	Nucleoside recognition
RSJ9_RS02800	COG0534	Mate efflux family protein
RSJ9_RS02805	COG1573	uracil-dna glycosylase
RSJ9_RS02815	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RSJ9_RS02815	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RSJ9_RS02820	COG4399	Belongs to the UPF0754 family
RSJ9_RS02825	COG0084	hydrolase, TatD family'
RSJ9_RS02830	COG3583	domain protein
RSJ9_RS02830	COG3584	3D domain protein
RSJ9_RS02865	COG1136	(ABC) transporter
RSJ9_RS02870	COG0577	efflux transmembrane transporter activity
RSJ9_RS02880	COG1141	Ferredoxin
RSJ9_RS02895	COG2199	diguanylate cyclase activity
RSJ9_RS02895	COG2203	Gaf domain
RSJ9_RS02900	COG1285	pathogenesis
RSJ9_RS02905	COG1328	CTP reductase activity
RSJ9_RS02925	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
RSJ9_RS02930	COG0060	amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as 'pretransfer' editing and involves the hydrolysis of activated Val-AMP. The other activity is designated 'posttransfer' editing and involves deacylation of mischarged Val-tRNA(Ile)
RSJ9_RS02940	COG1112	Superfamily I DNA and RNA helicases and helicase subunits
RSJ9_RS02945	COG0662	Cupin 2, conserved barrel domain protein
RSJ9_RS02945	COG0836	Belongs to the mannose-6-phosphate isomerase type 2 family
RSJ9_RS02950	COG1641	Involved in the biosynthesis of a nickel-pincer cofactor ((SCS)Ni(II) pincer complex). Binds Ni(2 ), and functions in nickel delivery to pyridinium-3,5-bisthiocarboxylic acid mononucleotide (P2TMN), to form the mature cofactor. Is thus probably required for the activation of nickel-pincer cofactor- dependent enzymes
RSJ9_RS02955	COG1606	tRNA processing
RSJ9_RS02960	COG1691	(AIR) carboxylase
RSJ9_RS02970	COG1653	transport
RSJ9_RS02980	COG3642	lipopolysaccharide core region biosynthetic process
RSJ9_RS03015	COG4466	Protein conserved in bacteria
RSJ9_RS03030	COG4242	Belongs to the peptidase S51 family
RSJ9_RS03035	COG0189	ligase activity
RSJ9_RS03035	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RSJ9_RS03050	COG0697	spore germination
RSJ9_RS03070	COG0707	Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II)
RSJ9_RS03075	COG2959	enzyme of heme biosynthesis
RSJ9_RS03095	COG0504	CTP synthase activity
RSJ9_RS03105	COG1158	Facilitates transcription termination by a mechanism that involves Rho binding to the nascent RNA, activation of Rho's RNA-dependent ATPase activity, and release of the mRNA from the DNA template
RSJ9_RS03120	COG3872	metal-dependent enzyme
RSJ9_RS03145	COG0009	L-threonylcarbamoyladenylate synthase
RSJ9_RS03150	COG0394	Belongs to the low molecular weight phosphotyrosine protein phosphatase family
RSJ9_RS03155	COG0698	ribose 5-phosphate isomerase
RSJ9_RS03170	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RSJ9_RS03175	COG0381	UDP-N-acetylglucosamine 2-epimerase activity
RSJ9_RS03185	COG0356	it plays a direct role in the translocation of protons across the membrane
RSJ9_RS03235	COG2385	sporulation resulting in formation of a cellular spore
RSJ9_RS03245	COG1609	Transcriptional regulator
RSJ9_RS03260	COG0037	tRNA processing
RSJ9_RS03295	COG0507	A helicase nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and repair. Holoenzyme degrades any linearized DNA that is unable to undergo homologous recombination. In the holoenzyme this subunit has ssDNA-dependent ATPase and 5'-3' helicase activity. When added to pre-assembled RecBC greatly stimulates nuclease activity and augments holoenzyme processivity. Negatively regulates the RecA-loading ability of RecBCD
RSJ9_RS03330	COG2183	response to ionizing radiation
RSJ9_RS03335	COG3601	Mediates riboflavin uptake, may also transport FMN and roseoflavin. Probably a riboflavin-binding protein that interacts with the energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates. The substrates themselves are bound by transmembrane, not extracytoplasmic soluble proteins
RSJ9_RS03360	COG0446	pyridine nucleotide-disulphide oxidoreductase
RSJ9_RS03370	COG2357	RelA SpoT domain protein
RSJ9_RS03380	COG0607	Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS
RSJ9_RS03415	COG0191	fructose-bisphosphate aldolase activity
RSJ9_RS03425	COG2323	membrane
RSJ9_RS03430	COG0441	Catalyzes the attachment of threonine to tRNA(Thr) in a two-step reaction L-threonine is first activated by ATP to form Thr-AMP and then transferred to the acceptor end of tRNA(Thr)
RSJ9_RS03440	COG1183	phosphatidylcholine synthase activity
RSJ9_RS03445	COG0517	IMP dehydrogenase activity
RSJ9_RS03450	COG1597	lipid kinase activity
RSJ9_RS03460	COG1032	radical SAM domain protein
RSJ9_RS03475	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RSJ9_RS03480	COG1045	serine acetyltransferase
RSJ9_RS03485	COG1600	Catalyzes the conversion of epoxyqueuosine (oQ) to queuosine (Q), which is a hypermodified base found in the wobble positions of tRNA(Asp), tRNA(Asn), tRNA(His) and tRNA(Tyr)
RSJ9_RS03495	COG0177	DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N- glycosidic bond, leaving an AP (apurinic apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'-phosphate
RSJ9_RS03500	COG0281	malic enzyme
RSJ9_RS03510	COG1073	alpha beta
RSJ9_RS03515	COG1363	Peptidase, m42
RSJ9_RS03520	COG2720	vancomycin resistance protein
RSJ9_RS03525	COG2720	vancomycin resistance protein
RSJ9_RS03530	COG1533	DNA photolyase activity
RSJ9_RS03535	COG0219	Methylates the ribose at the nucleotide 34 wobble position in the two leucyl isoacceptors tRNA(Leu)(CmAA) and tRNA(Leu)(cmnm5UmAA). Catalyzes the methyl transfer from S- adenosyl-L-methionine to the 2'-OH of the wobble nucleotide
RSJ9_RS03540	COG1307	EDD domain protein, DegV family
RSJ9_RS03545	COG1744	ABC transporter substrate-binding protein PnrA-like
RSJ9_RS03550	COG3845	ABC transporter
RSJ9_RS03555	COG4603	Belongs to the binding-protein-dependent transport system permease family
RSJ9_RS03560	COG1079	Belongs to the binding-protein-dependent transport system permease family
RSJ9_RS03570	COG1508	bacterial-type RNA polymerase transcriptional activator activity, sequence-specific DNA binding
RSJ9_RS03580	COG0057	glyceraldehyde-3-phosphate dehydrogenase (NAD+) (phosphorylating) activity
RSJ9_RS03600	COG0148	phosphopyruvate hydratase activity
RSJ9_RS03610	COG0557	exoribonuclease II activity
RSJ9_RS03615	COG0496	Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates
RSJ9_RS03640	COG0277	FAD linked oxidase domain protein
RSJ9_RS03645	COG2226	methyltransferase
RSJ9_RS03660	COG0076	glutamate decarboxylase activity
RSJ9_RS03665	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RSJ9_RS03675	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS03690	COG2205	protein histidine kinase activity
RSJ9_RS03695	COG0662	Cupin 2, conserved barrel domain protein
RSJ9_RS03705	COG0833	amino acid
RSJ9_RS03730	COG0262	Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis
RSJ9_RS03735	COG2176	DNA-directed DNA polymerase activity
RSJ9_RS03745	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RSJ9_RS03775	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RSJ9_RS03785	COG2323	membrane
RSJ9_RS03805	COG0785	Cytochrome C biogenesis protein
RSJ9_RS03810	COG0526	COG0526, thiol-disulfide isomerase and thioredoxins
RSJ9_RS03820	COG2205	protein histidine kinase activity
RSJ9_RS03825	COG0277	FAD linked oxidase domain protein
RSJ9_RS03830	COG1486	melibiose metabolic process
RSJ9_RS03835	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS03835	COG1263	PTS System
RSJ9_RS03850	COG2190	(PTS) system
RSJ9_RS03855	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS03860	COG5002	protein histidine kinase activity
RSJ9_RS03865	COG1136	(ABC) transporter
RSJ9_RS03870	COG0577	efflux transmembrane transporter activity
RSJ9_RS03875	COG1263	PTS System
RSJ9_RS03875	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS03880	COG1486	melibiose metabolic process
RSJ9_RS03885	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS03885	COG2190	(PTS) system
RSJ9_RS03885	COG1263	PTS System
RSJ9_RS03900	COG1278	Cold shock
RSJ9_RS03910	COG1959	2 iron, 2 sulfur cluster binding
RSJ9_RS03915	COG2761	dithiol-disulfide isomerase involved in polyketide biosynthesis
RSJ9_RS03920	COG2910	NAD(P)H-binding
RSJ9_RS03925	COG1737	Transcriptional regulator
RSJ9_RS03930	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS03930	COG1263	PTS System
RSJ9_RS03940	COG2190	(PTS) system
RSJ9_RS03940	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS03940	COG1263	PTS System
RSJ9_RS03945	COG0129	dihydroxy-acid dehydratase activity
RSJ9_RS03955	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RSJ9_RS03965	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS03970	COG2770	Histidine kinase
RSJ9_RS03970	COG2205	protein histidine kinase activity
RSJ9_RS03975	COG0463	Glycosyl transferase, family 2
RSJ9_RS03980	COG2246	polysaccharide biosynthetic process
RSJ9_RS04000	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS04005	COG1120	ATPase activity
RSJ9_RS04020	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RSJ9_RS04025	COG2207	Transcriptional regulator
RSJ9_RS04025	COG1609	Transcriptional regulator
RSJ9_RS04030	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RSJ9_RS04035	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS04040	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS04045	COG1120	ATPase activity
RSJ9_RS04050	COG1132	(ABC) transporter
RSJ9_RS04070	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS04075	COG2205	protein histidine kinase activity
RSJ9_RS04080	COG1968	undecaprenyl-diphosphatase activity
RSJ9_RS04085	COG1136	(ABC) transporter
RSJ9_RS04090	COG0577	efflux transmembrane transporter activity
RSJ9_RS04105	COG1346	cytolysis
RSJ9_RS04145	COG5001	Diguanylate cyclase
RSJ9_RS04145	COG4251	negative regulation of phosphorylation
RSJ9_RS04145	COG3706	GGDEF domain
RSJ9_RS04145	COG2203	Gaf domain
RSJ9_RS04180	COG5002	protein histidine kinase activity
RSJ9_RS04185	COG0037	tRNA processing
RSJ9_RS04190	COG3800	Transcriptional regulator
RSJ9_RS04190	COG1396	sequence-specific DNA binding
RSJ9_RS04195	COG0531	amino acid
RSJ9_RS04200	COG0006	proline dipeptidase activity
RSJ9_RS04230	COG0671	phosphoesterase, PA-phosphatase related
RSJ9_RS04240	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS04245	COG5002	protein histidine kinase activity
RSJ9_RS04245	COG3850	Histidine kinase
RSJ9_RS04255	COG2519	Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA
RSJ9_RS04260	COG0398	Pfam SNARE associated Golgi protein
RSJ9_RS04290	COG0520	Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine
RSJ9_RS04310	COG5002	protein histidine kinase activity
RSJ9_RS04315	COG4146	Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
RSJ9_RS04320	COG4656	Part of a membrane complex involved in electron transport
RSJ9_RS04325	COG4658	electron transport chain
RSJ9_RS04330	COG4659	FMN binding
RSJ9_RS04335	COG4660	Part of a membrane complex involved in electron transport
RSJ9_RS04340	COG4657	Part of a membrane complex involved in electron transport
RSJ9_RS04345	COG1245	4Fe-4S binding domain
RSJ9_RS04345	COG2878	Part of a membrane complex involved in electron transport
RSJ9_RS04370	COG1477	protein flavinylation
RSJ9_RS04415	COG0573	inorganic phosphate transmembrane transporter activity
RSJ9_RS04435	COG0531	amino acid
RSJ9_RS04455	COG0629	single-stranded DNA binding
RSJ9_RS04480	COG0457	Tetratricopeptide repeat
RSJ9_RS04480	COG0705	Rhomboid family
RSJ9_RS04490	COG0465	Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins
RSJ9_RS04540	COG3442	glutamine amidotransferase
RSJ9_RS04545	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
RSJ9_RS04550	COG1482	cell wall glycoprotein biosynthetic process
RSJ9_RS04560	COG1968	undecaprenyl-diphosphatase activity
RSJ9_RS04595	COG2220	Zn-dependent hydrolases of the beta-lactamase fold
RSJ9_RS04605	COG0119	Catalyzes the condensation of the acetyl group of acetyl-CoA with 3-methyl-2-oxobutanoate (2-oxoisovalerate) to form 3-carboxy-3-hydroxy-4-methylpentanoate (2-isopropylmalate)
RSJ9_RS04615	COG0473	3-isopropylmalate dehydrogenase activity
RSJ9_RS04620	COG1126	abc transporter atp-binding protein
RSJ9_RS04625	COG1757	Na H antiporter
RSJ9_RS04630	COG2155	Conserved Protein
RSJ9_RS04660	COG1131	(ABC) transporter
RSJ9_RS04670	COG1695	Transcriptional regulator
RSJ9_RS04695	COG1132	(ABC) transporter
RSJ9_RS04730	COG0375	protein maturation
RSJ9_RS04750	COG3290	protein histidine kinase activity
RSJ9_RS04750	COG0840	transmembrane signaling receptor activity
RSJ9_RS04760	COG1752	Esterase of the alpha-beta hydrolase superfamily
RSJ9_RS04785	COG0765	amino acid transport
RSJ9_RS04790	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RSJ9_RS04795	COG2226	methyltransferase
RSJ9_RS04800	COG3434	signal transduction protein containing EAL and modified HD-GYP domains
RSJ9_RS04815	COG0351	phosphomethylpyrimidine kinase
RSJ9_RS04815	COG0352	thiamine-phosphate diphosphorylase activity
RSJ9_RS04870	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS04885	COG1512	COG1512 Beta-propeller domains of methanol dehydrogenase type
RSJ9_RS04905	COG2226	methyltransferase
RSJ9_RS04910	COG3655	Transcriptional regulator
RSJ9_RS04925	COG0420	3'-5' exonuclease activity
RSJ9_RS04930	COG0419	ATPase involved in DNA repair
RSJ9_RS04940	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
RSJ9_RS04950	COG0640	Transcriptional regulator
RSJ9_RS04955	COG2217	Heavy metal translocating P-type atpase
RSJ9_RS04995	COG1136	(ABC) transporter
RSJ9_RS04995	COG0577	efflux transmembrane transporter activity
RSJ9_RS05000	COG1875	ATPase related to phosphate starvation-inducible protein PhoH
RSJ9_RS05005	COG4632	Exopolysaccharide biosynthesis protein
RSJ9_RS05005	COG5434	Belongs to the glycosyl hydrolase 28 family
RSJ9_RS05045	COG1131	(ABC) transporter
RSJ9_RS05060	COG1994	Peptidase M50
RSJ9_RS05090	COG2077	Thiol-specific peroxidase that catalyzes the reduction of hydrogen peroxide and organic hydroperoxides to water and alcohols, respectively. Plays a role in cell protection against oxidative stress by detoxifying peroxides
RSJ9_RS05095	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS05110	COG2267	carboxylic ester hydrolase activity
RSJ9_RS05115	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS05125	COG0840	transmembrane signaling receptor activity
RSJ9_RS05130	COG2204	response regulator
RSJ9_RS05135	COG0172	Catalyzes the attachment of serine to tRNA(Ser). Is also able to aminoacylate tRNA(Sec) with serine, to form the misacylated tRNA L-seryl-tRNA(Sec), which will be further converted into selenocysteinyl-tRNA(Sec)
RSJ9_RS05140	COG1199	ATP-dependent helicase activity
RSJ9_RS05170	COG2703	oxygen carrier activity
RSJ9_RS05195	COG0535	radical SAM domain protein
RSJ9_RS05220	COG5002	protein histidine kinase activity
RSJ9_RS05225	COG1136	(ABC) transporter
RSJ9_RS05245	COG0531	amino acid
RSJ9_RS05260	COG1522	sequence-specific DNA binding
RSJ9_RS05270	COG0531	amino acid
RSJ9_RS05275	COG0531	amino acid
RSJ9_RS05285	COG0658	competence protein
RSJ9_RS05285	COG2333	competence protein COMEC
RSJ9_RS05295	COG2059	Chromate
RSJ9_RS05300	COG2059	Chromate
RSJ9_RS05305	COG2337	Toxic component of a toxin-antitoxin (TA) module
RSJ9_RS05315	COG0171	NAD+ synthase (glutamine-hydrolyzing) activity
RSJ9_RS05315	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RSJ9_RS05340	COG0006	proline dipeptidase activity
RSJ9_RS05375	COG1073	alpha beta
RSJ9_RS05385	COG1966	Carbon starvation protein
RSJ9_RS05400	COG0488	(ABC) transporter
RSJ9_RS05420	COG0653	protein targeting
RSJ9_RS05425	COG1725	Transcriptional regulator
RSJ9_RS05430	COG1131	(ABC) transporter
RSJ9_RS05440	COG3842	ATPase activity
RSJ9_RS05450	COG1177	transmembrane transport
RSJ9_RS05455	COG4977	sequence-specific DNA binding
RSJ9_RS05455	COG1917	Cupin 2, conserved barrel domain protein
RSJ9_RS05460	COG1301	dicarboxylic acid transport
RSJ9_RS05470	COG0454	-acetyltransferase
RSJ9_RS05480	COG1357	PFAM Pentapeptide repeats (8 copies)
RSJ9_RS05485	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RSJ9_RS05485	COG0143	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RSJ9_RS05495	COG3279	Response regulator of the LytR AlgR family
RSJ9_RS05550	COG1132	(ABC) transporter
RSJ9_RS05570	COG1136	(ABC) transporter
RSJ9_RS05590	COG1307	EDD domain protein, DegV family
RSJ9_RS05605	COG1368	sulfuric ester hydrolase activity
RSJ9_RS05615	COG1972	Belongs to the concentrative nucleoside transporter (CNT) (TC 2.A.41) family
RSJ9_RS05645	COG3708	Transcriptional regulator
RSJ9_RS05645	COG2207	Transcriptional regulator
RSJ9_RS05670	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS05675	COG5002	protein histidine kinase activity
RSJ9_RS05680	COG1876	peptidase activity
RSJ9_RS05690	COG5002	protein histidine kinase activity
RSJ9_RS05700	COG0784	Response regulator, receiver
RSJ9_RS05705	COG5002	protein histidine kinase activity
RSJ9_RS05710	COG0772	Belongs to the SEDS family
RSJ9_RS05715	COG2230	cyclopropane-fatty-acyl-phospholipid synthase
RSJ9_RS05725	COG1132	(ABC) transporter
RSJ9_RS05745	COG0073	Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation
RSJ9_RS05750	COG2207	Transcriptional regulator
RSJ9_RS05755	COG1396	sequence-specific DNA binding
RSJ9_RS05765	COG3279	Response regulator of the LytR AlgR family
RSJ9_RS05785	COG0346	lactoylglutathione lyase activity
RSJ9_RS05790	COG1193	negative regulation of DNA recombination
RSJ9_RS05810	COG2832	Protein of unknown function (DUF454)
RSJ9_RS05845	COG0513	Belongs to the DEAD box helicase family
RSJ9_RS05860	COG2814	Major facilitator Superfamily
RSJ9_RS05870	COG0583	DNA-binding transcription factor activity
RSJ9_RS05885	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
RSJ9_RS05905	COG3711	transcriptional antiterminator
RSJ9_RS05910	COG2190	(PTS) system
RSJ9_RS05910	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS05910	COG1263	PTS System
RSJ9_RS05915	COG0613	PHP domain protein
RSJ9_RS05920	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RSJ9_RS05930	COG2846	Di-iron-containing protein involved in the repair of iron-sulfur clusters
RSJ9_RS05945	COG0786	glutamate:sodium symporter activity
RSJ9_RS05985	COG4120	Belongs to the binding-protein-dependent transport system permease family
RSJ9_RS06005	COG2112	serine threonine protein kinase
RSJ9_RS06010	COG0042	Catalyzes the synthesis of 5,6-dihydrouridine (D), a modified base found in the D-loop of most tRNAs, via the reduction of the C5-C6 double bond in target uridines
RSJ9_RS06040	COG4096	Type I site-specific restriction-modification system, R (Restriction) subunit and related
RSJ9_RS06060	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS06065	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS06070	COG1120	ATPase activity
RSJ9_RS06075	COG1348	The key enzymatic reactions in nitrogen fixation are catalyzed by the nitrogenase complex which has 2 components the iron protein and the molybdenum-iron protein
RSJ9_RS06080	COG2710	Component of the dark-operative protochlorophyllide reductase (DPOR) that uses Mg-ATP and reduced ferredoxin to reduce ring D of protochlorophyllide (Pchlide) to form chlorophyllide a (Chlide). This reaction is light-independent. The NB-protein
RSJ9_RS06090	COG0840	transmembrane signaling receptor activity
RSJ9_RS06120	COG0403	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RSJ9_RS06125	COG1003	The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor
RSJ9_RS06135	COG0095	Lipoate-protein ligase
RSJ9_RS06145	COG2207	Transcriptional regulator
RSJ9_RS06165	COG4185	zeta toxin
RSJ9_RS06170	COG0789	Transcriptional regulator
RSJ9_RS06195	COG2207	Transcriptional regulator
RSJ9_RS06195	COG3708	Transcriptional regulator
RSJ9_RS06200	COG0697	spore germination
RSJ9_RS06220	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RSJ9_RS06225	COG0840	transmembrane signaling receptor activity
RSJ9_RS06235	COG0488	(ABC) transporter
RSJ9_RS06255	COG0031	Belongs to the cysteine synthase cystathionine beta- synthase family
RSJ9_RS06260	COG1854	S-ribosylhomocysteine lyase activity
RSJ9_RS06265	COG0626	cystathionine gamma-synthase activity
RSJ9_RS06270	COG2226	methyltransferase
RSJ9_RS06300	COG1396	sequence-specific DNA binding
RSJ9_RS06410	COG0798	PFAM Bile acid sodium symporter
RSJ9_RS06415	COG2226	methyltransferase
RSJ9_RS06420	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS06450	COG1131	(ABC) transporter
RSJ9_RS06485	COG0352	thiamine-phosphate diphosphorylase activity
RSJ9_RS06485	COG0351	phosphomethylpyrimidine kinase
RSJ9_RS06500	COG1131	(ABC) transporter
RSJ9_RS06510	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS06525	COG2207	Transcriptional regulator
RSJ9_RS06525	COG3708	Transcriptional regulator
RSJ9_RS06545	COG1136	(ABC) transporter
RSJ9_RS06545	COG0577	efflux transmembrane transporter activity
RSJ9_RS06565	COG3850	Histidine kinase
RSJ9_RS06565	COG5002	protein histidine kinase activity
RSJ9_RS06575	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RSJ9_RS06580	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS06585	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS06590	COG1120	ATPase activity
RSJ9_RS06605	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
RSJ9_RS06620	COG4974	Belongs to the 'phage' integrase family
RSJ9_RS06625	COG0346	lactoylglutathione lyase activity
RSJ9_RS06645	COG1114	Component of the transport system for branched-chain amino acids
RSJ9_RS06650	COG1114	Component of the transport system for branched-chain amino acids
RSJ9_RS06655	COG0840	transmembrane signaling receptor activity
RSJ9_RS06665	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
RSJ9_RS06670	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
RSJ9_RS06675	COG0406	alpha-ribazole phosphatase activity
RSJ9_RS06680	COG2720	vancomycin resistance protein
RSJ9_RS06715	COG0720	synthase
RSJ9_RS06720	COG0294	Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8-dihydropteroate (H2Pte), the immediate precursor of folate derivatives
RSJ9_RS06730	COG0801	2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
RSJ9_RS06730	COG1539	Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin
RSJ9_RS06735	COG0071	Belongs to the small heat shock protein (HSP20) family
RSJ9_RS06740	COG0789	Transcriptional regulator
RSJ9_RS06745	COG0399	UDP-4-amino-4-deoxy-L-arabinose aminotransferase
RSJ9_RS06760	COG1595	DNA-templated transcription, initiation
RSJ9_RS06775	COG2267	carboxylic ester hydrolase activity
RSJ9_RS06785	COG1683	Conserved Protein
RSJ9_RS06790	COG1522	sequence-specific DNA binding
RSJ9_RS06805	COG1131	(ABC) transporter
RSJ9_RS06865	COG0456	acetyltransferase
RSJ9_RS06865	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
RSJ9_RS06880	COG1741	Belongs to the pirin family
RSJ9_RS06885	COG1733	regulation of RNA biosynthetic process
RSJ9_RS06890	COG0778	Nitroreductase
RSJ9_RS06900	COG2140	Oxalate decarboxylase
RSJ9_RS06905	COG1611	Belongs to the LOG family
RSJ9_RS06915	COG0583	DNA-binding transcription factor activity
RSJ9_RS06920	COG0519	Catalyzes the synthesis of GMP from XMP
RSJ9_RS06925	COG1011	Hydrolase
RSJ9_RS06940	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RSJ9_RS06950	COG2378	regulation of single-species biofilm formation
RSJ9_RS06975	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS06980	COG0778	Nitroreductase
RSJ9_RS06990	COG3711	transcriptional antiterminator
RSJ9_RS06995	COG2190	(PTS) system
RSJ9_RS06995	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS06995	COG1263	PTS System
RSJ9_RS07000	COG2723	6-phospho-beta-galactosidase activity
RSJ9_RS07065	COG1376	ErfK ybiS ycfS ynhG family protein
RSJ9_RS07095	COG1136	(ABC) transporter
RSJ9_RS07095	COG0577	efflux transmembrane transporter activity
RSJ9_RS07105	COG5002	protein histidine kinase activity
RSJ9_RS07110	COG1268	BioY protein
RSJ9_RS07120	COG1670	COG1670 acetyltransferases, including N-acetylases of ribosomal proteins
RSJ9_RS07125	COG1974	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair
RSJ9_RS07135	COG0789	Transcriptional regulator
RSJ9_RS07145	COG1270	Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group
RSJ9_RS07150	COG0079	Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
RSJ9_RS07170	COG1648	precorrin-2 dehydrogenase activity
RSJ9_RS07170	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RSJ9_RS07175	COG0181	hydroxymethylbilane synthase activity
RSJ9_RS07190	COG0113	porphobilinogen synthase activity
RSJ9_RS07235	COG3177	Filamentation induced by cAMP protein fic
RSJ9_RS07240	COG0778	Nitroreductase
RSJ9_RS07245	COG2320	Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A
RSJ9_RS07245	COG0456	acetyltransferase
RSJ9_RS07300	COG1335	isochorismatase
RSJ9_RS07310	COG1648	precorrin-2 dehydrogenase activity
RSJ9_RS07310	COG0007	Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD- dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme
RSJ9_RS07350	COG2109	Required for both de novo synthesis of the corrin ring for the assimilation of exogenous corrinoids. Participates in the adenosylation of a variety of incomplete and complete corrinoids
RSJ9_RS07360	COG2116	formate transmembrane transporter activity
RSJ9_RS07395	COG3842	ATPase activity
RSJ9_RS07425	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS07430	COG2205	protein histidine kinase activity
RSJ9_RS07435	COG1120	ATPase activity
RSJ9_RS07440	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS07445	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RSJ9_RS07450	COG2376	Dihydroxyacetone kinase
RSJ9_RS07460	COG2207	Transcriptional regulator
RSJ9_RS07460	COG0662	Cupin 2, conserved barrel domain protein
RSJ9_RS07465	COG0454	-acetyltransferase
RSJ9_RS07485	COG0656	L-ascorbic acid biosynthetic process
RSJ9_RS07545	COG0514	ATP-dependent DNA helicase (RecQ)
RSJ9_RS07550	COG1773	rubredoxin
RSJ9_RS07550	COG1592	Rubrerythrin
RSJ9_RS07555	COG0622	Phosphoesterase
RSJ9_RS07560	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS07580	COG0602	queuosine metabolic process
RSJ9_RS07595	COG1620	l-lactate permease
RSJ9_RS07600	COG3875	lactate racemase activity
RSJ9_RS07605	COG2086	electron transfer activity
RSJ9_RS07610	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
RSJ9_RS07615	COG0277	FAD linked oxidase domain protein
RSJ9_RS07640	COG0436	Aminotransferase
RSJ9_RS07650	COG1846	Transcriptional regulator
RSJ9_RS07655	COG0789	Transcriptional regulator
RSJ9_RS07655	COG4978	Transcriptional regulator
RSJ9_RS07665	COG0017	Asparaginyl-tRNA synthetase
RSJ9_RS07690	COG1011	Hydrolase
RSJ9_RS07705	COG0583	DNA-binding transcription factor activity
RSJ9_RS07710	COG0456	acetyltransferase
RSJ9_RS07720	COG1918	ferrous iron import across plasma membrane
RSJ9_RS07720	COG0370	Transporter of a GTP-driven Fe(2 ) uptake system
RSJ9_RS07740	COG1876	peptidase activity
RSJ9_RS07765	COG5002	protein histidine kinase activity
RSJ9_RS07775	COG2124	cytochrome p450
RSJ9_RS07795	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS07800	COG5002	protein histidine kinase activity
RSJ9_RS07815	COG4606	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS07820	COG4605	iron ion homeostasis
RSJ9_RS07825	COG4604	ABC transporter, ATP-binding protein
RSJ9_RS07830	COG4607	ABC-type enterochelin transport system periplasmic component
RSJ9_RS07845	COG1132	(ABC) transporter
RSJ9_RS07850	COG1132	(ABC) transporter
RSJ9_RS07860	COG3279	Response regulator of the LytR AlgR family
RSJ9_RS07890	COG1331	Highly conserved protein containing a thioredoxin domain
RSJ9_RS07895	COG4129	membrane
RSJ9_RS07935	COG0488	(ABC) transporter
RSJ9_RS07960	COG0446	pyridine nucleotide-disulphide oxidoreductase
RSJ9_RS07970	COG2271	Major facilitator Superfamily
RSJ9_RS07975	COG0018	arginyl-trna synthetase
RSJ9_RS07985	COG0436	Aminotransferase
RSJ9_RS07990	COG2239	Acts as a magnesium transporter
RSJ9_RS08025	COG3979	chitinase
RSJ9_RS08035	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RSJ9_RS08040	COG2011	ABC-type metal ion transport system permease component
RSJ9_RS08045	COG1464	Belongs to the NlpA lipoprotein family
RSJ9_RS08050	COG1464	Belongs to the NlpA lipoprotein family
RSJ9_RS08055	COG1473	amidohydrolase
RSJ9_RS08075	COG2186	Transcriptional regulator
RSJ9_RS08080	COG1284	Uncharacterised 5xTM membrane BCR, YitT family COG1284
RSJ9_RS08100	COG1236	Exonuclease of the beta-lactamase fold involved in RNA processing
RSJ9_RS08110	COG0617	tRNA 3'-terminal CCA addition
RSJ9_RS08115	COG1012	belongs to the aldehyde dehydrogenase family
RSJ9_RS08120	COG1115	amino acid carrier protein
RSJ9_RS08125	COG1115	amino acid carrier protein
RSJ9_RS08130	COG1846	Transcriptional regulator
RSJ9_RS08135	COG0534	Mate efflux family protein
RSJ9_RS08150	COG4134	Bacterial extracellular solute-binding protein
RSJ9_RS08160	COG1176	ABC-type spermidine putrescine transport system, permease component I
RSJ9_RS08165	COG3842	ATPase activity
RSJ9_RS08190	COG2431	L-lysine efflux transmembrane transporter activity
RSJ9_RS08220	COG5002	protein histidine kinase activity
RSJ9_RS08235	COG2239	Acts as a magnesium transporter
RSJ9_RS08245	COG1052	Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family
RSJ9_RS08265	COG1292	Belongs to the BCCT transporter (TC 2.A.15) family
RSJ9_RS08280	COG1335	isochorismatase
RSJ9_RS08285	COG1054	Belongs to the UPF0176 family
RSJ9_RS08315	COG2897	thiosulfate sulfurtransferase activity
RSJ9_RS08325	COG0628	permease
RSJ9_RS08360	COG3842	ATPase activity
RSJ9_RS08375	COG0539	negative regulation of cytoplasmic translation
RSJ9_RS08375	COG0761	Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)- butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP MEP pathway for isoprenoid precursor biosynthesis
RSJ9_RS08380	COG0824	Thioesterase
RSJ9_RS08395	COG4120	Belongs to the binding-protein-dependent transport system permease family
RSJ9_RS08400	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RSJ9_RS08410	COG0697	spore germination
RSJ9_RS08415	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RSJ9_RS08425	COG1893	Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid
RSJ9_RS08430	COG3404	Formiminotransferase-cyclodeaminase
RSJ9_RS08440	COG0561	phosphatase activity
RSJ9_RS08465	COG1959	2 iron, 2 sulfur cluster binding
RSJ9_RS08490	COG1606	tRNA processing
RSJ9_RS08510	COG3290	protein histidine kinase activity
RSJ9_RS08555	COG1231	oxidoreductase activity
RSJ9_RS08560	COG2207	Transcriptional regulator
RSJ9_RS08560	COG1917	Cupin 2, conserved barrel domain protein
RSJ9_RS08575	COG1940	carbohydrate kinase activity
RSJ9_RS08590	COG0162	Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two-step reaction tyrosine is first activated by ATP to form Tyr- AMP and then transferred to the acceptor end of tRNA(Tyr)
RSJ9_RS08600	COG1131	(ABC) transporter
RSJ9_RS08635	COG5001	Diguanylate cyclase
RSJ9_RS08635	COG3300	MHYT domain
RSJ9_RS08645	COG1760	l-serine dehydratase
RSJ9_RS08650	COG0840	transmembrane signaling receptor activity
RSJ9_RS08670	COG5663	Belongs to the 5'(3')-deoxyribonucleotidase family
RSJ9_RS08695	COG1136	(ABC) transporter
RSJ9_RS08700	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RSJ9_RS08705	COG0601	transmembrane transport
RSJ9_RS08725	COG3546	catalase activity
RSJ9_RS08730	COG4632	Exopolysaccharide biosynthesis protein
RSJ9_RS08730	COG5434	Belongs to the glycosyl hydrolase 28 family
RSJ9_RS08750	COG0756	dUTP diphosphatase activity
RSJ9_RS08785	COG1309	transcriptional regulator
RSJ9_RS08805	COG1115	amino acid carrier protein
RSJ9_RS08820	COG1395	domain, Protein
RSJ9_RS08850	COG1012	belongs to the aldehyde dehydrogenase family
RSJ9_RS08870	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
RSJ9_RS08875	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
RSJ9_RS08920	COG4857	Catalyzes the phosphorylation of methylthioribose into methylthioribose-1-phosphate
RSJ9_RS08935	COG0235	Class ii aldolase
RSJ9_RS08945	COG1349	DNA-binding transcription factor activity
RSJ9_RS08955	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
RSJ9_RS08960	COG2323	membrane
RSJ9_RS09015	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RSJ9_RS09020	COG1319	Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM
RSJ9_RS09025	COG2080	2 iron, 2 sulfur cluster binding
RSJ9_RS09030	COG0590	tRNA wobble adenosine to inosine editing
RSJ9_RS09055	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
RSJ9_RS09060	COG1115	amino acid carrier protein
RSJ9_RS09070	COG5298	Protein conserved in bacteria
RSJ9_RS09075	COG1215	transferase activity, transferring glycosyl groups
RSJ9_RS09100	COG1937	Protein conserved in bacteria
RSJ9_RS09105	COG2217	Heavy metal translocating P-type atpase
RSJ9_RS09110	COG2608	mercury ion transmembrane transporter activity
RSJ9_RS09115	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RSJ9_RS09120	COG1132	(ABC) transporter
RSJ9_RS09145	COG0577	efflux transmembrane transporter activity
RSJ9_RS09145	COG1136	(ABC) transporter
RSJ9_RS09185	COG1989	Cleaves type-4 fimbrial leader sequence and methylates the N-terminal (generally Phe) residue
RSJ9_RS09195	COG0569	domain protein
RSJ9_RS09225	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS09240	COG2385	sporulation resulting in formation of a cellular spore
RSJ9_RS09240	COG2247	cell wall binding repeat
RSJ9_RS09245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS09245	COG2190	(PTS) system
RSJ9_RS09245	COG1263	PTS System
RSJ9_RS09250	COG0020	Catalyzes the condensation of isopentenyl diphosphate (IPP) with allylic pyrophosphates generating different type of terpenoids
RSJ9_RS09270	COG1151	hydroxylamine reductase activity
RSJ9_RS09280	COG1251	Belongs to the nitrite and sulfite reductase 4Fe-4S domain family
RSJ9_RS09290	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RSJ9_RS09300	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RSJ9_RS09305	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS09310	COG1120	ATPase activity
RSJ9_RS09320	COG4231	catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates
RSJ9_RS09325	COG1737	Transcriptional regulator
RSJ9_RS09335	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS09335	COG1263	PTS System
RSJ9_RS09375	COG0840	transmembrane signaling receptor activity
RSJ9_RS09375	COG5278	phosphoserine phosphatase activity
RSJ9_RS09385	COG0601	transmembrane transport
RSJ9_RS09390	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RSJ9_RS09395	COG0444	Belongs to the ABC transporter superfamily
RSJ9_RS09400	COG4608	Belongs to the ABC transporter superfamily
RSJ9_RS09410	COG1108	ABC-type Mn2 Zn2 transport systems permease components
RSJ9_RS09415	COG1121	(ABC) transporter
RSJ9_RS09420	COG0803	Belongs to the bacterial solute-binding protein 9 family
RSJ9_RS09435	COG3706	GGDEF domain
RSJ9_RS09450	COG1116	anion transmembrane transporter activity
RSJ9_RS09455	COG0735	belongs to the Fur family
RSJ9_RS09470	COG1234	tRNA 3'-trailer cleavage
RSJ9_RS09475	COG0531	amino acid
RSJ9_RS09485	COG4585	Histidine kinase
RSJ9_RS09490	COG2197	response regulator
RSJ9_RS09495	COG1131	(ABC) transporter
RSJ9_RS09525	COG1278	Cold shock
RSJ9_RS09530	COG2195	Cleaves the N-terminal amino acid of tripeptides
RSJ9_RS09545	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RSJ9_RS09550	COG1136	(ABC) transporter
RSJ9_RS09555	COG0577	efflux transmembrane transporter activity
RSJ9_RS09565	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS09570	COG2205	protein histidine kinase activity
RSJ9_RS09575	COG1136	(ABC) transporter
RSJ9_RS09580	COG0577	efflux transmembrane transporter activity
RSJ9_RS09595	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
RSJ9_RS09605	COG1126	abc transporter atp-binding protein
RSJ9_RS09615	COG1686	Belongs to the peptidase S11 family
RSJ9_RS09620	COG0494	nUDIX hydrolase
RSJ9_RS09630	COG1979	alcohol dehydrogenase
RSJ9_RS09640	COG1288	antiporter activity
RSJ9_RS09645	COG1488	Catalyzes the synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate at the expense of ATP
RSJ9_RS09650	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RSJ9_RS09655	COG0765	amino acid transport
RSJ9_RS09665	COG0210	DNA helicase
RSJ9_RS09685	COG1246	Belongs to the acetyltransferase family. ArgA subfamily
RSJ9_RS09735	COG0210	DNA helicase
RSJ9_RS09745	COG0849	cell division
RSJ9_RS09750	COG1473	amidohydrolase
RSJ9_RS09755	COG0860	N-Acetylmuramoyl-L-alanine amidase
RSJ9_RS09765	COG2244	polysaccharide biosynthetic process
RSJ9_RS09790	COG1067	ATP-dependent peptidase activity
RSJ9_RS09810	COG3227	Zinc metalloprotease (Elastase)
RSJ9_RS09830	COG0157	Belongs to the NadC ModD family
RSJ9_RS09850	COG1272	protein, Hemolysin III
RSJ9_RS09855	COG0012	GTP binding
RSJ9_RS09860	COG2001	Belongs to the MraZ family
RSJ9_RS09875	COG0768	penicillin binding
RSJ9_RS09885	COG0770	UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase activity
RSJ9_RS09890	COG0472	First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan
RSJ9_RS09895	COG0772	Belongs to the SEDS family
RSJ9_RS09910	COG3856	small basic protein
RSJ9_RS09920	COG0325	Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis
RSJ9_RS09940	COG3599	regulation of cell shape
RSJ9_RS09950	COG0775	Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S- adenosylhomocysteine (SAH AdoHcy) to adenine and the corresponding thioribose, 5'-methylthioribose and S-ribosylhomocysteine, respectively
RSJ9_RS09955	COG2876	3-deoxy-7-phosphoheptulonate synthase activity
RSJ9_RS09955	COG1605	Chorismate mutase
RSJ9_RS09965	COG1734	Transcription factor that acts by binding directly to the RNA polymerase (RNAP). Required for negative regulation of rRNA expression and positive regulation of several amino acid biosynthesis promoters
RSJ9_RS09970	COG0597	This protein specifically catalyzes the removal of signal peptides from prolipoproteins
RSJ9_RS09975	COG0564	pseudouridine synthase activity
RSJ9_RS09980	COG2065	Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant
RSJ9_RS09985	COG2233	PERMEase
RSJ9_RS09990	COG0708	Exodeoxyribonuclease III
RSJ9_RS09995	COG0116	Belongs to the methyltransferase superfamily
RSJ9_RS10005	COG0725	ABC transporter, periplasmic molybdate-binding protein
RSJ9_RS10010	COG4149	molybdate abc transporter
RSJ9_RS10015	COG1118	Part of the ABC transporter complex CysAWTP involved in sulfate thiosulfate import. Responsible for energy coupling to the transport system
RSJ9_RS10025	COG1752	Esterase of the alpha-beta hydrolase superfamily
RSJ9_RS10035	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
RSJ9_RS10040	COG1757	Na H antiporter
RSJ9_RS10050	COG0523	cobalamin synthesis protein
RSJ9_RS10060	COG5012	cobalamin binding
RSJ9_RS10065	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
RSJ9_RS10080	COG0407	Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III
RSJ9_RS10085	COG1135	Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system
RSJ9_RS10090	COG2011	ABC-type metal ion transport system permease component
RSJ9_RS10095	COG1464	Belongs to the NlpA lipoprotein family
RSJ9_RS10105	COG1902	pentaerythritol trinitrate reductase activity
RSJ9_RS10105	COG0446	pyridine nucleotide-disulphide oxidoreductase
RSJ9_RS10115	COG0665	tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase activity
RSJ9_RS10115	COG0723	plastoquinol--plastocyanin reductase activity
RSJ9_RS10125	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
RSJ9_RS10130	COG0667	Aldo Keto reductase
RSJ9_RS10135	COG3760	aminoacyl-tRNA metabolism involved in translational fidelity
RSJ9_RS10145	COG3842	ATPase activity
RSJ9_RS10155	COG0395	ABC-type sugar transport system, permease component
RSJ9_RS10165	COG0039	L-malate dehydrogenase activity
RSJ9_RS10170	COG2186	Transcriptional regulator
RSJ9_RS10200	COG0840	transmembrane signaling receptor activity
RSJ9_RS10215	COG1733	regulation of RNA biosynthetic process
RSJ9_RS10225	COG0350	Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction the enzyme is irreversibly inactivated
RSJ9_RS10230	COG5564	TIM-barrel signal transduction protein
RSJ9_RS10240	COG5564	TIM-barrel signal transduction protein
RSJ9_RS10245	COG3620	sequence-specific DNA binding
RSJ9_RS10250	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RSJ9_RS10255	COG0053	Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family
RSJ9_RS10275	COG1639	'signal transduction protein
RSJ9_RS10285	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RSJ9_RS10300	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RSJ9_RS10305	COG2197	response regulator
RSJ9_RS10315	COG2378	regulation of single-species biofilm formation
RSJ9_RS10325	COG1924	4 iron, 4 sulfur cluster binding
RSJ9_RS10330	COG0720	synthase
RSJ9_RS10335	COG0602	queuosine metabolic process
RSJ9_RS10345	COG0603	Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0))
RSJ9_RS10370	COG2390	Transcriptional regulator
RSJ9_RS10380	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RSJ9_RS10395	COG0141	Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine
RSJ9_RS10405	COG0118	IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR
RSJ9_RS10425	COG0139	Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP
RSJ9_RS10430	COG0140	phosphoribosyl-ATP diphosphatase activity
RSJ9_RS10435	COG2391	methyltransferase activity
RSJ9_RS10445	COG2391	methyltransferase activity
RSJ9_RS10450	COG0583	DNA-binding transcription factor activity
RSJ9_RS10460	COG0446	pyridine nucleotide-disulphide oxidoreductase
RSJ9_RS10465	COG2391	methyltransferase activity
RSJ9_RS10470	COG1131	(ABC) transporter
RSJ9_RS10495	COG2235	arginine
RSJ9_RS10550	COG0614	abc-type fe3 -hydroxamate transport system, periplasmic component
RSJ9_RS10550	COG2207	Transcriptional regulator
RSJ9_RS10555	COG2375	cellular response to nickel ion
RSJ9_RS10555	COG1132	(ABC) transporter
RSJ9_RS10560	COG1132	(ABC) transporter
RSJ9_RS10565	COG1609	Transcriptional regulator
RSJ9_RS10570	COG1940	carbohydrate kinase activity
RSJ9_RS10575	COG0366	Alpha amylase catalytic
RSJ9_RS10580	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS10580	COG2190	(PTS) system
RSJ9_RS10580	COG1263	PTS System
RSJ9_RS10610	COG2205	protein histidine kinase activity
RSJ9_RS10635	COG0561	phosphatase activity
RSJ9_RS10640	COG1349	DNA-binding transcription factor activity
RSJ9_RS10665	COG0685	methylenetetrahydrofolate reductase (NAD(P)H) activity
RSJ9_RS10675	COG0646	methionine synthase
RSJ9_RS10675	COG1410	methionine synthase
RSJ9_RS10705	COG1071	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
RSJ9_RS10710	COG0022	dehydrogenase e1 component
RSJ9_RS10715	COG3199	ATP-NAD kinase
RSJ9_RS10720	COG0508	dehydrogenase complex catalyzes the overall conversion of
RSJ9_RS10725	COG1249	Belongs to the class-I pyridine nucleotide-disulfide oxidoreductase family
RSJ9_RS10730	COG0095	Lipoate-protein ligase
RSJ9_RS10735	COG1125	glycine betaine transport
RSJ9_RS10735	COG0517	IMP dehydrogenase activity
RSJ9_RS10755	COG0527	aspartate kinase activity
RSJ9_RS10760	COG0460	homoserine dehydrogenase
RSJ9_RS10785	COG0493	'glutamate synthase
RSJ9_RS10785	COG1142	4fe-4S ferredoxin, iron-sulfur binding domain protein
RSJ9_RS10800	COG5492	domain, Protein
RSJ9_RS10855	COG0787	Catalyzes the interconversion of L-alanine and D- alanine. May also act on other amino acids
RSJ9_RS10860	COG0840	transmembrane signaling receptor activity
RSJ9_RS10875	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS10880	COG0840	transmembrane signaling receptor activity
RSJ9_RS10900	COG0553	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair
RSJ9_RS10925	COG0601	transmembrane transport
RSJ9_RS10930	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RSJ9_RS10940	COG0847	DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. The epsilon subunit contain the editing function and is a proofreading 3'-5' exonuclease
RSJ9_RS10940	COG1199	ATP-dependent helicase activity
RSJ9_RS10945	COG4086	secreted protein
RSJ9_RS10955	COG0071	Belongs to the small heat shock protein (HSP20) family
RSJ9_RS10960	COG2814	Major facilitator Superfamily
RSJ9_RS10965	COG1309	transcriptional regulator
RSJ9_RS10975	COG1105	Belongs to the carbohydrate kinase PfkB family
RSJ9_RS10980	COG3104	oligopeptide transport
RSJ9_RS11005	COG0524	Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5- phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway
RSJ9_RS11010	COG2340	Cysteine-rich secretory protein family
RSJ9_RS11030	COG0488	(ABC) transporter
RSJ9_RS11035	COG2606	Belongs to the prolyl-tRNA editing family. YbaK EbsC subfamily
RSJ9_RS11045	COG0784	Response regulator, receiver
RSJ9_RS11045	COG0835	chemotaxis
RSJ9_RS11055	COG2996	Protein conserved in bacteria
RSJ9_RS11075	COG1705	Flagellar rod assembly protein muramidase FlgJ
RSJ9_RS11080	COG1528	Iron-storage protein
RSJ9_RS11090	COG2201	protein-glutamate methylesterase activity
RSJ9_RS11100	COG3314	Sporulation integral membrane protein YlbJ
RSJ9_RS11120	COG4974	Belongs to the 'phage' integrase family
RSJ9_RS11135	COG4100	CystaTHIonine beta-lyase family protein involved in aluminum resistance
RSJ9_RS11145	COG0324	Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A)
RSJ9_RS11150	COG0323	This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a molecular matchmaker , a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex
RSJ9_RS11155	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
RSJ9_RS11165	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS11175	COG0436	Aminotransferase
RSJ9_RS11205	COG2081	HI0933 family
RSJ9_RS11215	COG1737	Transcriptional regulator
RSJ9_RS11220	COG1187	pseudouridine synthase activity
RSJ9_RS11235	COG1215	transferase activity, transferring glycosyl groups
RSJ9_RS11245	COG0840	transmembrane signaling receptor activity
RSJ9_RS11250	COG4232	protein-disulfide reductase activity
RSJ9_RS11260	COG0388	Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source
RSJ9_RS11270	COG0475	glutathione-regulated potassium exporter activity
RSJ9_RS11270	COG0569	domain protein
RSJ9_RS11275	COG0599	Antioxidant protein with alkyl hydroperoxidase activity. Required for the reduction of the AhpC active site cysteine residues and for the regeneration of the AhpC enzyme activity
RSJ9_RS11290	COG0393	Putative heavy-metal-binding
RSJ9_RS11300	COG1905	PFAM NADH dehydrogenase (ubiquinone) 24 kDa subunit
RSJ9_RS11320	COG0309	Hydrogenase expression formation protein (HypE)
RSJ9_RS11325	COG0409	Hydrogenase expression formation protein
RSJ9_RS11330	COG0298	carbon dioxide binding
RSJ9_RS11385	COG0488	(ABC) transporter
RSJ9_RS11415	COG0628	permease
RSJ9_RS11420	COG1686	Belongs to the peptidase S11 family
RSJ9_RS11430	COG3874	Sporulation protein YtfJ
RSJ9_RS11440	COG1354	Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves
RSJ9_RS11450	COG1686	Belongs to the peptidase S11 family
RSJ9_RS11470	COG0213	The enzymes which catalyze the reversible phosphorolysis of pyrimidine nucleosides are involved in the degradation of these compounds and in their utilization as carbon and energy sources, or in the rescue of pyrimidine bases for nucleotide synthesis
RSJ9_RS11475	COG0005	The purine nucleoside phosphorylases catalyze the phosphorolytic breakdown of the N-glycosidic bond in the beta- (deoxy)ribonucleoside molecules, with the formation of the corresponding free purine bases and pentose-1-phosphate
RSJ9_RS11480	COG4974	Belongs to the 'phage' integrase family
RSJ9_RS11495	COG0494	nUDIX hydrolase
RSJ9_RS11555	COG4974	Belongs to the 'phage' integrase family
RSJ9_RS11560	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS11565	COG0750	zinc metalloprotease
RSJ9_RS11570	COG1897	L-methionine biosynthetic process from homoserine via O-succinyl-L-homoserine and cystathionine
RSJ9_RS11575	COG0460	homoserine dehydrogenase
RSJ9_RS11580	COG2873	o-acetylhomoserine
RSJ9_RS11585	COG0497	DNA recombination
RSJ9_RS11600	COG1189	Ribosomal RNA methyltransferase RrmJ FtsJ
RSJ9_RS11605	COG1154	Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP)
RSJ9_RS11675	COG3854	ATPases associated with a variety of cellular activities
RSJ9_RS11690	COG0757	Catalyzes a trans-dehydration via an enolate intermediate
RSJ9_RS11695	COG0703	Catalyzes the specific phosphorylation of the 3-hydroxyl group of shikimic acid using ATP as a cosubstrate
RSJ9_RS11735	COG2165	general secretion pathway protein
RSJ9_RS11745	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RSJ9_RS11815	COG1196	nuclear chromosome segregation
RSJ9_RS11845	COG2804	Type II secretory pathway, ATPase PulE Tfp pilus assembly pathway, ATPase PilB
RSJ9_RS11880	COG0076	glutamate decarboxylase activity
RSJ9_RS11890	COG0840	transmembrane signaling receptor activity
RSJ9_RS11890	COG5278	phosphoserine phosphatase activity
RSJ9_RS11910	COG5002	protein histidine kinase activity
RSJ9_RS11915	COG0225	Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine
RSJ9_RS11925	COG5002	protein histidine kinase activity
RSJ9_RS11945	COG1131	(ABC) transporter
RSJ9_RS11955	COG1132	(ABC) transporter
RSJ9_RS11980	COG2414	aldehyde ferredoxin oxidoreductase
RSJ9_RS12000	COG0315	cyclic pyranopterin monophosphate synthase activity
RSJ9_RS12010	COG0303	'Molybdopterin
RSJ9_RS12015	COG0303	'Molybdopterin
RSJ9_RS12020	COG0521	Mo-molybdopterin cofactor biosynthetic process
RSJ9_RS12040	COG0534	Mate efflux family protein
RSJ9_RS12055	COG1136	(ABC) transporter
RSJ9_RS12060	COG0577	efflux transmembrane transporter activity
RSJ9_RS12070	COG1132	(ABC) transporter
RSJ9_RS12080	COG4978	Transcriptional regulator
RSJ9_RS12080	COG0789	Transcriptional regulator
RSJ9_RS12090	COG0277	FAD linked oxidase domain protein
RSJ9_RS12115	COG4545	Glutaredoxin-related protein
RSJ9_RS12120	COG0251	oxidation-reduction process
RSJ9_RS12125	COG1301	dicarboxylic acid transport
RSJ9_RS12130	COG1168	Bifunctional PLP-dependent enzyme with beta-cystaTHIonase and maltose regulon repressor activities
RSJ9_RS12150	COG5002	protein histidine kinase activity
RSJ9_RS12155	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS12165	COG0619	Transmembrane (T) component of an energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates
RSJ9_RS12170	COG4172	Belongs to the ABC transporter superfamily
RSJ9_RS12175	COG4721	ABC-type cobalt transport system, permease component
RSJ9_RS12190	COG0697	spore germination
RSJ9_RS12195	COG0814	amino acid
RSJ9_RS12230	COG3263	regulation of cellular component size
RSJ9_RS12240	COG0249	that it carries out the mismatch recognition step. This protein has a weak ATPase activity
RSJ9_RS12245	COG1263	PTS System
RSJ9_RS12245	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS12250	COG0366	Alpha amylase catalytic
RSJ9_RS12255	COG2188	Transcriptional regulator
RSJ9_RS12260	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RSJ9_RS12260	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RSJ9_RS12260	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RSJ9_RS12265	COG1445	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RSJ9_RS12265	COG1299	protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity
RSJ9_RS12265	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RSJ9_RS12270	COG1105	Belongs to the carbohydrate kinase PfkB family
RSJ9_RS12310	COG0840	transmembrane signaling receptor activity
RSJ9_RS12320	COG3457	Alanine racemase
RSJ9_RS12330	COG0673	inositol 2-dehydrogenase activity
RSJ9_RS12335	COG0461	Catalyzes the transfer of a ribosyl phosphate group from 5-phosphoribose 1-diphosphate to orotate, leading to the formation of orotidine monophosphate (OMP)
RSJ9_RS12345	COG3706	GGDEF domain
RSJ9_RS12355	COG3829	transcription factor binding
RSJ9_RS12365	COG2340	Cysteine-rich secretory protein family
RSJ9_RS12370	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS12375	COG0697	spore germination
RSJ9_RS12380	COG0436	Aminotransferase
RSJ9_RS12385	COG1126	abc transporter atp-binding protein
RSJ9_RS12390	COG0765	amino acid transport
RSJ9_RS12395	COG0834	ABC-type amino acid transport signal transduction systems periplasmic component domain
RSJ9_RS12400	COG3875	lactate racemase activity
RSJ9_RS12405	COG0075	2-aminoethylphosphonate-pyruvate transaminase activity
RSJ9_RS12460	COG0006	proline dipeptidase activity
RSJ9_RS12475	COG0733	neurotransmitter:sodium symporter activity
RSJ9_RS12480	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS12510	COG2304	oxidoreductase activity
RSJ9_RS12520	COG0714	Associated with various cellular activities
RSJ9_RS12525	COG4716	Myosin-crossreactive antigen
RSJ9_RS12560	COG1045	serine acetyltransferase
RSJ9_RS12645	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS12650	COG1819	glycosyl
RSJ9_RS12665	COG0402	S-adenosylhomocysteine deaminase activity
RSJ9_RS12670	COG1457	Belongs to the purine-cytosine permease (2.A.39) family
RSJ9_RS12695	COG0210	DNA helicase
RSJ9_RS12765	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RSJ9_RS12770	COG1215	transferase activity, transferring glycosyl groups
RSJ9_RS12775	COG1216	Glycosyl transferase, family 2
RSJ9_RS12795	COG4869	propanediol catabolic process
RSJ9_RS12800	COG1012	belongs to the aldehyde dehydrogenase family
RSJ9_RS12800	COG1454	alcohol dehydrogenase
RSJ9_RS12815	COG4576	ethanolamine utilization protein EutN carboxysome structural protein Ccml
RSJ9_RS12845	COG1180	Activation of pyruvate formate-lyase under anaerobic conditions by generation of an organic free radical, using S- adenosylmethionine and reduced flavodoxin as cosubstrates to produce 5'-deoxy-adenosine
RSJ9_RS12850	COG1882	Formate acetyltransferase
RSJ9_RS12855	COG1454	alcohol dehydrogenase
RSJ9_RS12855	COG1012	belongs to the aldehyde dehydrogenase family
RSJ9_RS12880	COG0789	Transcriptional regulator
RSJ9_RS12890	COG0534	Mate efflux family protein
RSJ9_RS12910	COG3878	Protein conserved in bacteria
RSJ9_RS12925	COG3764	Sortase (surface protein transpeptidase)
RSJ9_RS12940	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS12960	COG0577	efflux transmembrane transporter activity
RSJ9_RS12970	COG3655	Transcriptional regulator
RSJ9_RS12980	COG1063	alcohol dehydrogenase
RSJ9_RS12995	COG0577	efflux transmembrane transporter activity
RSJ9_RS13000	COG1136	(ABC) transporter
RSJ9_RS13010	COG3711	transcriptional antiterminator
RSJ9_RS13010	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RSJ9_RS13025	COG1762	phosphoenolpyruvate-dependent sugar phosphotransferase system
RSJ9_RS13030	COG0176	Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway
RSJ9_RS13045	COG0344	acyl-phosphate glycerol-3-phosphate acyltransferase activity
RSJ9_RS13075	COG1337	RAMP superfamily
RSJ9_RS13085	COG1353	crispr-associated protein
RSJ9_RS13095	COG0110	maltose O-acetyltransferase activity
RSJ9_RS13110	COG3104	oligopeptide transport
RSJ9_RS13115	COG2226	methyltransferase
RSJ9_RS13120	COG3708	Transcriptional regulator
RSJ9_RS13120	COG2207	Transcriptional regulator
RSJ9_RS13145	COG1522	sequence-specific DNA binding
RSJ9_RS13155	COG0384	phenazine biosynthesis protein PhzF
RSJ9_RS13160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS13170	COG1396	sequence-specific DNA binding
RSJ9_RS13185	COG2233	PERMEase
RSJ9_RS13195	COG0531	amino acid
RSJ9_RS13210	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
RSJ9_RS13215	COG2086	electron transfer activity
RSJ9_RS13220	COG1960	acyl-CoA dehydrogenase activity
RSJ9_RS13255	COG0840	transmembrane signaling receptor activity
RSJ9_RS13270	COG0346	lactoylglutathione lyase activity
RSJ9_RS13275	COG2610	gluconate transmembrane transporter activity
RSJ9_RS13285	COG3395	kinase activity
RSJ9_RS13290	COG1349	DNA-binding transcription factor activity
RSJ9_RS13325	COG5599	Phosphatase
RSJ9_RS13330	COG1063	alcohol dehydrogenase
RSJ9_RS13340	COG0375	protein maturation
RSJ9_RS13345	COG0378	Facilitates the functional incorporation of the urease nickel metallocenter. This process requires GTP hydrolysis, probably effectuated by UreG
RSJ9_RS13355	COG2894	cell division
RSJ9_RS13360	COG0489	protein tyrosine kinase activity
RSJ9_RS13380	COG1360	Flagellar Motor Protein
RSJ9_RS13385	COG1291	archaeal or bacterial-type flagellum-dependent cell motility
RSJ9_RS13390	COG0860	N-Acetylmuramoyl-L-alanine amidase
RSJ9_RS13390	COG2247	cell wall binding repeat
RSJ9_RS13405	COG1297	OPT oligopeptide transporter protein
RSJ9_RS13410	COG2195	Cleaves the N-terminal amino acid of tripeptides
RSJ9_RS13430	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS13435	COG1668	transmembrane transport
RSJ9_RS13440	COG4555	ABC transporter
RSJ9_RS13445	COG2153	protein acetylation
RSJ9_RS13450	COG1846	Transcriptional regulator
RSJ9_RS13460	COG2205	protein histidine kinase activity
RSJ9_RS13470	COG0578	Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family
RSJ9_RS13480	COG0531	amino acid
RSJ9_RS13530	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RSJ9_RS13560	COG1846	Transcriptional regulator
RSJ9_RS13570	COG0006	proline dipeptidase activity
RSJ9_RS13575	COG3104	oligopeptide transport
RSJ9_RS13700	COG0789	Transcriptional regulator
RSJ9_RS13830	COG1783	phage Terminase large subunit
RSJ9_RS13835	COG5484	DNA packaging
RSJ9_RS13835	COG3728	DNA packaging
RSJ9_RS13975	COG2002	toxin-antitoxin pair type II binding
RSJ9_RS14025	COG3561	AntA/AntB antirepressor
RSJ9_RS14040	COG2856	Zn peptidase
RSJ9_RS14075	COG0605	Destroys radicals which are normally produced within the cells and which are toxic to biological systems
RSJ9_RS14080	COG1132	(ABC) transporter
RSJ9_RS14085	COG1132	(ABC) transporter
RSJ9_RS14110	COG2205	protein histidine kinase activity
RSJ9_RS14115	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS14120	COG2226	methyltransferase
RSJ9_RS14140	COG0242	peptide deformylase activity
RSJ9_RS14160	COG1028	Short-chain dehydrogenase reductase Sdr
RSJ9_RS14165	COG3344	reverse transcriptase
RSJ9_RS14170	COG3315	Exhibits S-adenosyl-L-methionine-dependent methyltransferase activity
RSJ9_RS14245	COG5002	protein histidine kinase activity
RSJ9_RS14245	COG3850	Histidine kinase
RSJ9_RS14250	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS14270	COG1484	DNA-dependent DNA replication
RSJ9_RS14275	COG0445	tRNA wobble uridine modification
RSJ9_RS14285	COG2155	Conserved Protein
RSJ9_RS14290	COG1925	phosphoenolpyruvate-dependent sugar phosphotransferase system
RSJ9_RS14295	COG0436	Aminotransferase
RSJ9_RS14300	COG2076	Multidrug Resistance protein
RSJ9_RS14310	COG0382	Catalyzes the prenylation of para-hydroxybenzoate (PHB) with an all-trans polyprenyl group. Mediates the second step in the final reaction sequence of ubiquinone-8 (UQ-8) biosynthesis, which is the condensation of the polyisoprenoid side chain with PHB, generating the first membrane-bound Q intermediate 3- octaprenyl-4-hydroxybenzoate
RSJ9_RS14315	COG2359	stage V sporulation protein S
RSJ9_RS14330	COG0558	Belongs to the CDP-alcohol phosphatidyltransferase class-I family
RSJ9_RS14340	COG1674	ftsk spoiiie
RSJ9_RS14345	COG0740	serine-type endopeptidase activity
RSJ9_RS14350	COG0527	aspartate kinase activity
RSJ9_RS14360	COG0612	Peptidase, M16
RSJ9_RS14375	COG0196	riboflavin kinase activity
RSJ9_RS14385	COG0618	3'(2'),5'-bisphosphate nucleotidase activity
RSJ9_RS14400	COG1358	cellular component organization or biogenesis
RSJ9_RS14405	COG2740	Nucleic-acid-binding protein implicated in transcription termination
RSJ9_RS14410	COG0195	Participates in both transcription termination and antitermination
RSJ9_RS14425	COG0821	Converts 2C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-2,4cPP) into 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate
RSJ9_RS14430	COG0750	zinc metalloprotease
RSJ9_RS14455	COG4589	Belongs to the CDS family
RSJ9_RS14495	COG0550	Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5'-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3'-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA supercoils. Finally, in the religation step, the DNA 3'-OH attacks the covalent intermediate to expel the active-site tyrosine and restore the DNA phosphodiester backbone
RSJ9_RS14500	COG0758	DNA mediated transformation
RSJ9_RS14505	COG0606	chelatase, subunit chli
RSJ9_RS14520	COG1161	Required for a late step of 50S ribosomal subunit assembly. Has GTPase activity
RSJ9_RS14525	COG0681	Belongs to the peptidase S26 family
RSJ9_RS14545	COG1837	Belongs to the UPF0109 family
RSJ9_RS14555	COG0541	Involved in targeting and insertion of nascent membrane proteins into the cytoplasmic membrane. Binds to the hydrophobic signal sequence of the ribosome-nascent chain (RNC) as it emerges from the ribosomes. The SRP-RNC complex is then targeted to the cytoplasmic membrane where it interacts with the SRP receptor FtsY
RSJ9_RS14565	COG0552	protein localization to endoplasmic reticulum
RSJ9_RS14590	COG0236	Carrier of the growing fatty acid chain in fatty acid biosynthesis
RSJ9_RS14600	COG0333	Belongs to the bacterial ribosomal protein bL32 family
RSJ9_RS14605	COG1399	metal-binding, possibly nucleic acid-binding protein
RSJ9_RS14615	COG0280	phosphate acetyltransferase
RSJ9_RS14630	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
RSJ9_RS14635	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
RSJ9_RS14645	COG5275	peptidyl-tyrosine sulfation
RSJ9_RS14645	COG0252	asparaginase activity
RSJ9_RS14665	COG0840	transmembrane signaling receptor activity
RSJ9_RS14690	COG0531	amino acid
RSJ9_RS14710	COG5275	peptidyl-tyrosine sulfation
RSJ9_RS14710	COG0252	asparaginase activity
RSJ9_RS14715	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
RSJ9_RS14720	COG1978	Selenoprotein B, glycine betaine sarcosine D-proline reductase family
RSJ9_RS14730	COG5275	peptidyl-tyrosine sulfation
RSJ9_RS14730	COG0252	asparaginase activity
RSJ9_RS14740	COG4656	Part of a membrane complex involved in electron transport
RSJ9_RS14745	COG0252	asparaginase activity
RSJ9_RS14745	COG5275	peptidyl-tyrosine sulfation
RSJ9_RS14750	COG4656	Part of a membrane complex involved in electron transport
RSJ9_RS14775	COG5275	peptidyl-tyrosine sulfation
RSJ9_RS14775	COG0252	asparaginase activity
RSJ9_RS14780	COG4656	Part of a membrane complex involved in electron transport
RSJ9_RS14785	COG3290	protein histidine kinase activity
RSJ9_RS14785	COG3829	transcription factor binding
RSJ9_RS14810	COG0742	ribosomal rna small subunit methyltransferase
RSJ9_RS14815	COG1200	Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y-DNA)
RSJ9_RS14820	COG1461	Dihydroxyacetone kinase
RSJ9_RS14825	COG1302	Protein conserved in bacteria
RSJ9_RS14850	COG0036	Belongs to the ribulose-phosphate 3-epimerase family
RSJ9_RS14860	COG2815	serine threonine protein kinase
RSJ9_RS14860	COG0515	serine threonine protein kinase
RSJ9_RS14865	COG0631	protein serine/threonine phosphatase activity
RSJ9_RS14875	COG0781	Involved in transcription antitermination. Required for transcription of ribosomal RNA (rRNA) genes. Binds specifically to the boxA antiterminator sequence of the ribosomal RNA (rrn) operons
RSJ9_RS14875	COG0144	Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA
RSJ9_RS14880	COG2738	Putative neutral zinc metallopeptidase
RSJ9_RS14890	COG0242	peptide deformylase activity
RSJ9_RS14895	COG1198	Involved in the restart of stalled replication forks. Recognizes and binds the arrested nascent DNA chain at stalled replication forks. It can open the DNA duplex, via its helicase activity, and promote assembly of the primosome and loading of the major replicative helicase DnaB onto DNA
RSJ9_RS14900	COG0452	Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine
RSJ9_RS14910	COG0194	GDP metabolic process
RSJ9_RS14920	COG1561	YicC-like family, N-terminal region
RSJ9_RS14935	COG0699	ATPase. Has a role at an early stage in the morphogenesis of the spore coat
RSJ9_RS14960	COG0704	Plays a role in the regulation of phosphate uptake
RSJ9_RS14965	COG1117	ATPase-coupled phosphate ion transmembrane transporter activity
RSJ9_RS14970	COG0581	inorganic phosphate transmembrane transporter activity
RSJ9_RS14975	COG0573	inorganic phosphate transmembrane transporter activity
RSJ9_RS14980	COG0226	Part of the ABC transporter complex PstSACB involved in phosphate import
RSJ9_RS14985	COG5002	protein histidine kinase activity
RSJ9_RS14990	COG0745	RESPONSE REGULATOR receiver
RSJ9_RS14995	COG1496	oxidoreductase activity
RSJ9_RS15005	COG1873	PFAM PRC-barrel domain
RSJ9_RS15010	COG1191	sigma factor activity
RSJ9_RS15015	COG1191	sigma factor activity
RSJ9_RS15025	COG0206	Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity
RSJ9_RS15030	COG0849	cell division
RSJ9_RS15035	COG1215	transferase activity, transferring glycosyl groups
RSJ9_RS15080	COG3861	electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
RSJ9_RS15125	COG0768	penicillin binding
RSJ9_RS15130	COG0572	uridine kinase
RSJ9_RS15135	COG0826	peptidase U32
RSJ9_RS15140	COG4122	O-methyltransferase activity
RSJ9_RS15145	COG1559	Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation
RSJ9_RS15150	COG1217	gtp-binding protein TYPA
RSJ9_RS15155	COG0595	An RNase that has 5'-3' exonuclease and possibly endonuclease activity. Involved in maturation of rRNA and in some organisms also mRNA maturation and or decay
RSJ9_RS15160	COG0735	belongs to the Fur family
RSJ9_RS15185	COG0628	permease
RSJ9_RS15195	COG0822	iron-sulfur transferase activity
RSJ9_RS15205	COG1959	2 iron, 2 sulfur cluster binding
RSJ9_RS15210	COG2256	atpase related to the helicase subunit of the holliday junction resolvase
RSJ9_RS15215	COG1387	Histidinol phosphatase and related hydrolases of the PHP family
RSJ9_RS15240	COG1115	amino acid carrier protein
RSJ9_RS15245	COG1115	amino acid carrier protein
RSJ9_RS15260	COG0046	Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP-dependent manner. PurS interacts with PurQ and PurL and is thought to assist in the transfer of the ammonia molecule from PurQ to PurL
RSJ9_RS15270	COG0574	Belongs to the PEP-utilizing enzyme family
RSJ9_RS15270	COG3848	Pyruvate phosphate dikinase
RSJ9_RS15285	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RSJ9_RS15340	COG2966	Psort location CytoplasmicMembrane, score
RSJ9_RS15350	COG1937	Protein conserved in bacteria
RSJ9_RS15355	COG0561	phosphatase activity
RSJ9_RS15365	COG1057	Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD)
RSJ9_RS15370	COG0039	L-malate dehydrogenase activity
RSJ9_RS15385	COG1362	aminopeptidase activity
RSJ9_RS15390	COG0598	Magnesium transport protein CorA
RSJ9_RS15395	COG0212	Belongs to the 5-formyltetrahydrofolate cyclo-ligase family
RSJ9_RS15400	COG1493	Catalyzes the ATP- as well as the pyrophosphate- dependent phosphorylation of a specific serine residue in HPr, a phosphocarrier protein of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS). HprK P also catalyzes the pyrophosphate-producing, inorganic phosphate-dependent dephosphorylation (phosphorolysis) of seryl-phosphorylated HPr (P- Ser-HPr). The two antagonistic activities of HprK P are regulated by several intracellular metabolites, which change their concentration in response to the absence or presence of rapidly metabolisable carbon sources (glucose, fructose, etc.) in the growth medium. Therefore, by controlling the phosphorylation state of HPr, HPrK P is a sensor enzyme that plays a major role in the regulation of carbon metabolism and sugar transport it mediates carbon catabolite repression (CCR), and regulates PTS-catalyzed carbohydrate uptake and inducer exclusion
RSJ9_RS15410	COG0398	Pfam SNARE associated Golgi protein
RSJ9_RS15415	COG0398	Pfam SNARE associated Golgi protein
RSJ9_RS15435	COG0463	Glycosyl transferase, family 2
RSJ9_RS15440	COG2897	thiosulfate sulfurtransferase activity
RSJ9_RS15445	COG1494	fructose-1,6-bisphosphatase
RSJ9_RS15460	COG0426	domain, Protein
RSJ9_RS15510	COG0636	F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation
RSJ9_RS15515	COG1269	ATP hydrolysis coupled proton transport
RSJ9_RS15545	COG0474	ATPase, P-type transporting, HAD superfamily, subfamily IC
RSJ9_RS15565	COG4786	Flagellar basal body rod
RSJ9_RS15580	COG1191	sigma factor activity
RSJ9_RS15590	COG0455	bacterial-type flagellum organization
RSJ9_RS15595	COG1419	protein localization to endoplasmic reticulum
RSJ9_RS15600	COG1298	Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RSJ9_RS15605	COG1377	Required for formation of the rod structure in the basal body of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin
RSJ9_RS15615	COG1338	Plays a role in the flagellum-specific transport system
RSJ9_RS15640	COG1582	Flagellar protein (FlbD)
RSJ9_RS15645	COG4786	Flagellar basal body rod
RSJ9_RS15655	COG1843	Required for flagellar hook formation. May act as a scaffolding protein
RSJ9_RS15670	COG1157	protein secretion by the type III secretion system
RSJ9_RS15680	COG1536	FliG is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
RSJ9_RS15685	COG1766	The M ring may be actively involved in energy transduction
RSJ9_RS15690	COG1677	Flagellar hook-basal body complex protein FliE
RSJ9_RS15695	COG1558	bacterial-type flagellum-dependent cell motility
RSJ9_RS15700	COG1815	bacterial-type flagellum-dependent cell motility
RSJ9_RS15705	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RSJ9_RS15735	COG1502	Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol
RSJ9_RS15740	COG4129	membrane
RSJ9_RS15760	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RSJ9_RS15765	COG2089	acid synthase
RSJ9_RS15770	COG1083	cytidylyl-transferase
RSJ9_RS15790	COG0562	UDP-galactopyranose mutase
RSJ9_RS15800	COG0489	protein tyrosine kinase activity
RSJ9_RS15805	COG4464	protein tyrosine phosphatase activity
RSJ9_RS15810	COG3944	biosynthesis protein
RSJ9_RS15815	COG1316	TRANSCRIPTIONal
RSJ9_RS15835	COG0840	transmembrane signaling receptor activity
RSJ9_RS15840	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RSJ9_RS15860	COG3980	spore coat polysaccharide biosynthesis protein
RSJ9_RS15890	COG0438	transferase activity, transferring glycosyl groups
RSJ9_RS15915	COG0438	transferase activity, transferring glycosyl groups
RSJ9_RS15965	COG2089	acid synthase
RSJ9_RS15970	COG1861	Spore coat polysaccharide biosynthesis protein F CMP-KDO synthetase
RSJ9_RS15980	COG1181	Belongs to the D-alanine--D-alanine ligase family
RSJ9_RS15985	COG0451	ADP-glyceromanno-heptose 6-epimerase activity
RSJ9_RS15990	COG1086	Polysaccharide biosynthesis protein
RSJ9_RS15995	COG0457	Tetratricopeptide repeat
RSJ9_RS15995	COG0463	Glycosyl transferase, family 2
RSJ9_RS16010	COG0463	Glycosyl transferase, family 2
RSJ9_RS16015	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RSJ9_RS16020	COG1344	Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella
RSJ9_RS16030	COG1345	Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end
RSJ9_RS16035	COG1516	flagellar protein fliS
RSJ9_RS16065	COG1256	bacterial-type flagellum assembly
RSJ9_RS16065	COG4786	Flagellar basal body rod
RSJ9_RS16080	COG1886	FliN is one of three proteins (FliG, FliN, FliM) that form the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
RSJ9_RS16080	COG1776	CheC inhibitor of MCP methylation
RSJ9_RS16085	COG1868	FliM is one of three proteins (FliG, FliN, FliM) that forms the rotor-mounted switch complex (C ring), located at the base of the basal body. This complex interacts with the CheY and CheZ chemotaxis proteins, in addition to contacting components of the motor that determine the direction of flagellar rotation
RSJ9_RS16090	COG0835	chemotaxis
RSJ9_RS16095	COG2201	protein-glutamate methylesterase activity
RSJ9_RS16100	COG1776	CheC inhibitor of MCP methylation
RSJ9_RS16105	COG0643	Histidine kinase
RSJ9_RS16105	COG2198	Histidine kinase
RSJ9_RS16110	COG1352	Methylation of the membrane-bound methyl-accepting chemotaxis proteins (MCP) to form gamma-glutamyl methyl ester residues in MCP
RSJ9_RS16115	COG2201	protein-glutamate methylesterase activity
RSJ9_RS16135	COG1263	PTS System
RSJ9_RS16135	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS16135	COG2190	(PTS) system
RSJ9_RS16140	COG3711	transcriptional antiterminator
RSJ9_RS16145	COG0115	Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family
RSJ9_RS16180	COG5002	protein histidine kinase activity
RSJ9_RS16185	COG0608	single-stranded DNA 5'-3' exodeoxyribonuclease activity
RSJ9_RS16185	COG4199	Single-strand DNA-specific exonuclease, C terminal domain
RSJ9_RS16215	COG1954	Regulates expression of the glpD operon. In the presence of glycerol 3-phosphate (G3P) causes antitermination of transcription of glpD at the inverted repeat of the leader region to enhance its transcription. Binds and stabilizes glpD leader mRNA
RSJ9_RS16220	COG0188	A type II topoisomerase that negatively supercoils closed circular double-stranded (ds) DNA in an ATP-dependent manner to modulate DNA topology and maintain chromosomes in an underwound state. Negative supercoiling favors strand separation, and DNA replication, transcription, recombination and repair, all of which involve strand separation. Also able to catalyze the interconversion of other topological isomers of dsDNA rings, including catenanes and knotted rings. Type II topoisomerases break and join 2 DNA strands simultaneously in an ATP-dependent manner
RSJ9_RS16225	COG0187	DNA topoisomerase II activity
RSJ9_RS16260	COG1087	Belongs to the NAD(P)-dependent epimerase dehydratase family
RSJ9_RS16285	COG2207	Transcriptional regulator
RSJ9_RS16290	COG1619	proteins homologs of microcin C7 resistance protein MccF
RSJ9_RS16305	COG0580	Belongs to the MIP aquaporin (TC 1.A.8) family
RSJ9_RS16310	COG0393	Putative heavy-metal-binding
RSJ9_RS16320	COG1131	(ABC) transporter
RSJ9_RS16325	COG1725	Transcriptional regulator
RSJ9_RS16335	COG1151	hydroxylamine reductase activity
RSJ9_RS16355	COG0814	amino acid
RSJ9_RS16360	COG0697	spore germination
RSJ9_RS16390	COG3290	protein histidine kinase activity
RSJ9_RS16390	COG0840	transmembrane signaling receptor activity
RSJ9_RS16405	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RSJ9_RS16415	COG3584	3D domain protein
RSJ9_RS16415	COG1388	LysM domain
RSJ9_RS16425	COG0840	transmembrane signaling receptor activity
RSJ9_RS16435	COG0208	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RSJ9_RS16440	COG0209	Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides
RSJ9_RS16460	COG0389	Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII
RSJ9_RS16470	COG0493	'glutamate synthase
RSJ9_RS16505	COG1514	Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester
RSJ9_RS16515	COG0840	transmembrane signaling receptor activity
RSJ9_RS16520	COG2723	6-phospho-beta-galactosidase activity
RSJ9_RS16550	COG1820	Belongs to the metallo-dependent hydrolases superfamily. NagA family
RSJ9_RS16555	COG2188	Transcriptional regulator
RSJ9_RS16560	COG3711	transcriptional antiterminator
RSJ9_RS16570	COG1264	protein-N(PI)-phosphohistidine-sugar phosphotransferase activity
RSJ9_RS16570	COG1263	PTS System
RSJ9_RS16575	COG0534	Mate efflux family protein
RSJ9_RS16580	COG0719	Fe-S assembly protein
RSJ9_RS16585	COG3842	ATPase activity
RSJ9_RS16595	COG0735	belongs to the Fur family
RSJ9_RS16600	COG0534	Mate efflux family protein
RSJ9_RS16605	COG0426	domain, Protein
RSJ9_RS16610	COG1960	acyl-CoA dehydrogenase activity
RSJ9_RS16615	COG2801	Transposase and inactivated derivatives
RSJ9_RS16630	COG3715	PTS system
RSJ9_RS16635	COG3716	PTS system mannose fructose sorbose family IID component
RSJ9_RS16645	COG1788	Acyl CoA acetate 3-ketoacid CoA transferase, alpha subunit
RSJ9_RS16660	COG2068	MobA-Related Protein
RSJ9_RS16665	COG2080	2 iron, 2 sulfur cluster binding
RSJ9_RS16675	COG1529	Aldehyde oxidase and xanthine dehydrogenase
RSJ9_RS16680	COG2723	6-phospho-beta-galactosidase activity
RSJ9_RS16685	COG0475	glutathione-regulated potassium exporter activity
RSJ9_RS16710	COG0488	(ABC) transporter
RSJ9_RS16725	COG1680	COG1680 Beta-lactamase class C and other penicillin binding
RSJ9_RS16730	COG1309	transcriptional regulator
RSJ9_RS16785	COG0535	radical SAM domain protein
RSJ9_RS16795	COG1132	(ABC) transporter
RSJ9_RS16810	COG1368	sulfuric ester hydrolase activity
RSJ9_RS16815	COG0730	response to heat
RSJ9_RS16825	COG0807	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RSJ9_RS16825	COG0108	Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate
RSJ9_RS16840	COG2195	Cleaves the N-terminal amino acid of tripeptides
RSJ9_RS16845	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RSJ9_RS16865	COG0151	Belongs to the GarS family
RSJ9_RS16875	COG0299	Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate
RSJ9_RS16885	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RSJ9_RS16895	COG0041	Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR)
RSJ9_RS16910	COG0624	Catalyzes the hydrolysis of N-succinyl-L,L- diaminopimelic acid (SDAP), forming succinate and LL-2,6- diaminoheptanedioate (DAP), an intermediate involved in the bacterial biosynthesis of lysine and meso-diaminopimelic acid, an essential component of bacterial cell walls
RSJ9_RS16915	COG0402	S-adenosylhomocysteine deaminase activity
RSJ9_RS16920	COG1145	4fe-4S ferredoxin, iron-sulfur binding domain protein
RSJ9_RS16920	COG0493	'glutamate synthase
RSJ9_RS16925	COG0078	Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline
RSJ9_RS16935	COG2233	PERMEase
RSJ9_RS16945	COG3829	transcription factor binding
RSJ9_RS16950	COG0769	Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan
RSJ9_RS16960	COG3608	succinylglutamate desuccinylase aspartoacylase
RSJ9_RS16960	COG1975	Xanthine and CO dehydrogenases maturation factor, XdhC CoxF family
RSJ9_RS16975	COG0609	Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily
RSJ9_RS16980	COG1120	ATPase activity
RSJ9_RS17005	COG2252	PERMEase
RSJ9_RS17010	COG1115	amino acid carrier protein
RSJ9_RS17015	COG3973	AAA domain
RSJ9_RS17030	COG4187	Peptidase family M20/M25/M40
RSJ9_RS17035	COG1956	GAF domain-containing protein
RSJ9_RS17040	COG1253	flavin adenine dinucleotide binding
RSJ9_RS17055	COG0034	Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine
RSJ9_RS17080	COG1725	Transcriptional regulator
RSJ9_RS17100	COG0664	- Catabolite gene activator and regulatory subunit of cAMP-dependent protein
RSJ9_RS17105	COG3773	Cell wall hydrolase
RSJ9_RS17125	COG0584	glycerophosphoryl diester phosphodiesterase
RSJ9_RS17410	COG4974	Belongs to the 'phage' integrase family
RSJ9_RS17425	COG0327	Belongs to the GTP cyclohydrolase I type 2 NIF3 family
RSJ9_RS17440	COG0568	sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released
RSJ9_RS17445	COG0358	DNA primase activity
RSJ9_RS17460	COG0574	Belongs to the PEP-utilizing enzyme family
RSJ9_RS17460	COG1080	General (non sugar-specific) component of the phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS). This major carbohydrate active-transport system catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. Enzyme I transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein (HPr)
RSJ9_RS17465	COG0517	IMP dehydrogenase activity
RSJ9_RS17470	COG0264	Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome
RSJ9_RS17475	COG1381	Involved in DNA repair and RecF pathway recombination
RSJ9_RS17500	COG1480	7TM receptor with intracellular HD hydrolase
RSJ9_RS17515	COG1610	YqeY-like protein
RSJ9_RS17525	COG0537	adenosine 5'-monophosphoramidase activity
RSJ9_RS17530	COG0621	Catalyzes the methylthiolation of N6- (dimethylallyl)adenosine (i(6)A), leading to the formation of 2- methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine
RSJ9_RS17535	COG1385	rRNA (uridine-N3-)-methyltransferase activity
RSJ9_RS17545	COG0484	heat shock protein binding
RSJ9_RS17565	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RSJ9_RS17635	COG0709	Synthesizes selenophosphate from selenide and ATP
RSJ9_RS17645	COG1686	Belongs to the peptidase S11 family
RSJ9_RS17650	COG0564	pseudouridine synthase activity
RSJ9_RS17655	COG0251	oxidation-reduction process
RSJ9_RS17660	COG1316	TRANSCRIPTIONal
RSJ9_RS17665	COG1713	HD superfamily hydrolase involved in NAD metabolism
RSJ9_RS17675	COG1534	Rna-binding protein
RSJ9_RS17720	COG0739	heme binding
RSJ9_RS17725	COG0772	Belongs to the SEDS family
RSJ9_RS17735	COG2894	cell division
RSJ9_RS17740	COG0850	regulation of cytokinetic process
RSJ9_RS17745	COG0768	penicillin binding
RSJ9_RS17760	COG1077	Cell shape determining protein MreB Mrl
RSJ9_RS17825	COG0237	dephospho-CoA kinase activity
RSJ9_RS17830	COG0749	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RSJ9_RS17830	COG0258	In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity
RSJ9_RS17975	COG1484	DNA-dependent DNA replication
RSJ9_RS18060	COG0635	Involved in the biosynthesis of porphyrin-containing compound
RSJ9_RS18065	COG0491	Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
RSJ9_RS18075	COG0317	In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance
RSJ9_RS18090	COG0341	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RSJ9_RS18095	COG0342	Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA
RSJ9_RS18115	COG1862	Preprotein translocase
RSJ9_RS18150	COG1739	Uncharacterized protein family UPF0029
RSJ9_RS18160	COG1167	Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain MocR family and their eukaryotic orthologs
RSJ9_RS18175	COG1773	rubredoxin
RSJ9_RS18180	COG2262	GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis
RSJ9_RS18185	COG0634	Belongs to the purine pyrimidine phosphoribosyltransferase family
RSJ9_RS18205	COG0332	Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched- chain and or straight-chain of fatty acids
RSJ9_RS18220	COG2172	sigma factor antagonist activity
RSJ9_RS18245	COG1922	lipopolysaccharide N-acetylmannosaminouronosyltransferase activity
RSJ9_RS18260	COG0728	peptidoglycan biosynthetic process
RSJ9_RS18270	COG0438	transferase activity, transferring glycosyl groups
RSJ9_RS18290	COG0438	transferase activity, transferring glycosyl groups
RSJ9_RS18330	COG1086	Polysaccharide biosynthesis protein
RSJ9_RS18350	COG4193	domain, Protein
RSJ9_RS18355	COG1210	Utp--glucose-1-phosphate uridylyltransferase
RSJ9_RS18365	COG1109	Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate
RSJ9_RS18370	COG1825	This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance
RSJ9_RS18375	COG1982	Orn Lys Arg decarboxylase major
RSJ9_RS18385	COG0280	phosphate acetyltransferase
RSJ9_RS18395	COG1683	Conserved Protein
RSJ9_RS18405	COG0826	peptidase U32
RSJ9_RS18450	COG0566	Belongs to the class IV-like SAM-binding methyltransferase superfamily. RNA methyltransferase TrmH family
RSJ9_RS18455	COG0569	domain protein
RSJ9_RS18460	COG0168	Low-affinity potassium transport system. Interacts with trk system potassium uptake protein TrkA
RSJ9_RS18500	COG1131	(ABC) transporter
RSJ9_RS18535	COG2226	methyltransferase
RSJ9_RS18545	COG4608	Belongs to the ABC transporter superfamily
RSJ9_RS18550	COG0444	Belongs to the ABC transporter superfamily
RSJ9_RS18555	COG1173	ABC-type dipeptide oligopeptide nickel transport systems, permease components
RSJ9_RS18560	COG0601	transmembrane transport
RSJ9_RS18570	COG0136	Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L- aspartyl-4-phosphate
RSJ9_RS18580	COG0289	4-hydroxy-tetrahydrodipicolinate reductase
RSJ9_RS18585	COG0436	Aminotransferase
RSJ9_RS18605	COG0726	polysaccharide deacetylase
RSJ9_RS18635	COG0456	acetyltransferase
RSJ9_RS18640	COG1136	(ABC) transporter
RSJ9_RS18655	COG0715	COG0715 ABC-type nitrate sulfonate bicarbonate transport systems periplasmic components
RSJ9_RS18665	COG1116	anion transmembrane transporter activity
RSJ9_RS18670	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component
RSJ9_RS18690	COG0612	Peptidase, M16
RSJ9_RS18715	COG3123	guanosine phosphorylase activity
RSJ9_RS18720	COG0345	Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline
RSJ9_RS18735	COG1396	sequence-specific DNA binding
RSJ9_RS18740	COG0272	DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA
RSJ9_RS18755	COG0714	Associated with various cellular activities
RSJ9_RS18785	COG1924	4 iron, 4 sulfur cluster binding
RSJ9_RS18795	COG2025	fatty acid beta-oxidation using acyl-CoA dehydrogenase
RSJ9_RS18800	COG2086	electron transfer activity
RSJ9_RS18805	COG1960	acyl-CoA dehydrogenase activity
RSJ9_RS18810	COG0183	Belongs to the thiolase family
RSJ9_RS18815	COG1250	3-hydroxyacyl-CoA dehydrogenase
RSJ9_RS18820	COG1024	Enoyl-CoA hydratase
RSJ9_RS18835	COG2252	PERMEase
RSJ9_RS18870	COG0584	glycerophosphoryl diester phosphodiesterase
RSJ9_RS18875	COG0840	transmembrane signaling receptor activity
RSJ9_RS18880	COG1592	Rubrerythrin
RSJ9_RS18880	COG1773	rubredoxin
RSJ9_RS18910	COG0735	belongs to the Fur family
RSJ9_RS18925	COG2378	regulation of single-species biofilm formation
RSJ9_RS18950	COG0218	Necessary for normal cell division and for the maintenance of normal septation
RSJ9_RS18955	COG0466	ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short-lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner
RSJ9_RS18960	COG1067	ATP-dependent peptidase activity
RSJ9_RS18960	COG0470	DNA polymerase III
RSJ9_RS18980	COG1082	Xylose isomerase domain protein TIM barrel
RSJ9_RS18995	COG0167	dihydroorotate dehydrogenase activity
RSJ9_RS19000	COG0543	2 iron, 2 sulfur cluster binding
RSJ9_RS19025	COG1924	4 iron, 4 sulfur cluster binding
RSJ9_RS19035	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
RSJ9_RS19040	COG1775	2-hydroxyglutaryl-CoA dehydratase, D-component
RSJ9_RS19060	COG0600	ABC-type nitrate sulfonate bicarbonate transport system permease component