CLI_RS00010 IPR001957 Chromosomal replication control, initiator DnaA CLI_RS00010 IPR003593 AAA+ ATPase domain CLI_RS00010 IPR010921 Trp repressor/replication initiator CLI_RS00010 IPR013159 Chromosomal replication initiator, DnaA C-terminal CLI_RS00010 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CLI_RS00010 IPR018312 Chromosomal replication control, initiator DnaA, conserved site CLI_RS00010 IPR020591 Chromosomal replication control, initiator DnaA-like CLI_RS00010 IPR024633 DnaA N-terminal domain CLI_RS00010 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00015 IPR001001 DNA polymerase III, beta chain CLI_RS00015 IPR022634 DNA polymerase III, beta chain, N-terminal CLI_RS00015 IPR022635 DNA polymerase III, beta chain, C-terminal CLI_RS00015 IPR022637 DNA polymerase III, beta chain, central CLI_RS00020 IPR002942 RNA-binding S4 domain CLI_RS00020 IPR014330 RNA-binding S4-related,YaaA CLI_RS00025 IPR001238 DNA-binding, RecF CLI_RS00025 IPR003395 RecF/RecN/SMC, N-terminal CLI_RS00025 IPR018078 DNA-binding, RecF, conserved site CLI_RS00025 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00030 IPR007169 Uncharacterised protein family UPF0296 CLI_RS00035 IPR000565 DNA topoisomerase, type IIA, subunit B CLI_RS00035 IPR001241 DNA topoisomerase, type IIA CLI_RS00035 IPR002288 DNA gyrase B subunit, C-terminal CLI_RS00035 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS00035 IPR006171 Toprim domain CLI_RS00035 IPR011557 DNA gyrase, subunit B CLI_RS00035 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLI_RS00035 IPR013759 DNA topoisomerase, type IIA, central domain CLI_RS00035 IPR013760 DNA topoisomerase, type IIA-like domain CLI_RS00035 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS00035 IPR018522 DNA topoisomerase, type IIA, conserved site CLI_RS00035 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS00040 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLI_RS00040 IPR005743 DNA gyrase, subunit A CLI_RS00040 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CLI_RS00040 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CLI_RS00040 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLI_RS00040 IPR013760 DNA topoisomerase, type IIA-like domain CLI_RS00040 IPR024946 Arginine repressor C-terminal-like domain CLI_RS00070 IPR006674 HD domain CLI_RS00070 IPR006675 Uncharacterised domain HDIG CLI_RS00075 IPR004173 3H domain CLI_RS00075 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00075 IPR013196 Helix-turn-helix, type 11 CLI_RS00075 IPR026043 Transcription repressor NadR CLI_RS00080 IPR007160 Domain of unknown function DUF362 CLI_RS00080 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00080 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00085 IPR005372 Uncharacterised protein family UPF0182 CLI_RS00090 IPR005490 L,D-transpeptidase catalytic domain CLI_RS00095 IPR006076 FAD dependent oxidoreductase CLI_RS00095 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS00095 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS00100 IPR012460 Protein of unknown function DUF1667 CLI_RS00105 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLI_RS00105 IPR002317 Serine-tRNA ligase, type1 CLI_RS00105 IPR010978 tRNA-binding arm CLI_RS00105 IPR015866 Serine-tRNA synthetase, type1, N-terminal CLI_RS00140 IPR003817 Phosphatidylserine decarboxylase-related CLI_RS00140 IPR033177 CLI_RS00140 CLI_RS00140 IPR033179 CLI_RS00140 CLI_RS00145 IPR004147 UbiB domain CLI_RS00145 IPR011009 Protein kinase-like domain CLI_RS00160 IPR000014 PAS domain CLI_RS00160 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS00160 IPR003593 AAA+ ATPase domain CLI_RS00160 IPR009057 Homeodomain-like CLI_RS00160 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS00160 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS00160 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS00160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00160 IPR030828 CLI_RS00160 CLI_RS00165 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLI_RS00165 IPR006237 Methionine gamma-lyase CLI_RS00165 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS00165 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS00165 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS00170 IPR016192 APOBEC/CMP deaminase, zinc-binding CLI_RS00170 IPR016193 Cytidine deaminase-like CLI_RS00170 IPR028883 tRNA-specific adenosine deaminase CLI_RS00180 IPR003593 AAA+ ATPase domain CLI_RS00180 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLI_RS00180 IPR012763 DNA polymerase III, subunit gamma/ tau CLI_RS00180 IPR022754 DNA polymerase III, gamma subunit, domain III CLI_RS00180 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00185 IPR004401 Nucleoid-associated protein YbaB CLI_RS00190 IPR000093 DNA recombination protein RecR CLI_RS00190 IPR006171 Toprim domain CLI_RS00190 IPR015967 Recombination protein RecR, conserved site CLI_RS00190 IPR023627 Recombination protein RecR CLI_RS00190 IPR023628 Recombination protein RecR, C4-type zinc finger CLI_RS00195 IPR019644 Protein of unknown function DUF2508 CLI_RS00200 IPR010001 SigmaK-factor processing regulatory BofA CLI_RS00205 IPR005224 Sugar fermentation stimulation protein CLI_RS00210 IPR000086 NUDIX hydrolase domain CLI_RS00210 IPR015797 NUDIX hydrolase domain-like CLI_RS00210 IPR020084 NUDIX hydrolase, conserved site CLI_RS00215 IPR013785 Aldolase-type TIM barrel CLI_RS00220 IPR001226 Flavodoxin, conserved site CLI_RS00220 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00220 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00220 IPR026816 Flavodoxin domain CLI_RS00220 IPR029039 Flavoprotein-like CLI_RS00230 IPR000594 UBA/THIF-type NAD/FAD binding fold CLI_RS00230 IPR016040 NAD(P)-binding domain CLI_RS00235 IPR011701 Major facilitator superfamily CLI_RS00235 IPR020846 Major facilitator superfamily domain CLI_RS00240 IPR000182 GNAT domain CLI_RS00240 IPR016181 Acyl-CoA N-acyltransferase CLI_RS00265 IPR005122 Uracil-DNA glycosylase-like CLI_RS00290 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS00290 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00290 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS00290 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS00290 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS00290 IPR014284 RNA polymerase sigma-70 like domain CLI_RS00295 IPR025436 Domain of unknown function DUF4179 CLI_RS00320 IPR007002 DltD, central domain CLI_RS00345 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLI_RS00345 IPR027304 Trigger factor/SurA domain CLI_RS00365 IPR003000 Sirtuin family CLI_RS00365 IPR026591 Sirtuin family, catalytic core small domain CLI_RS00365 IPR028628 Sirtuin, class U CLI_RS00365 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS00375 IPR003507 Muramoyl-tetrapeptide carboxypeptidase CLI_RS00375 IPR027461 LD-carboxypeptidase A, C-terminal domain CLI_RS00375 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CLI_RS00375 IPR029062 Class I glutamine amidotransferase-like CLI_RS00380 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CLI_RS00390 IPR017144 Peptidase M20A, amidohydrolase, predicted CLI_RS00395 IPR019700 Sigma-G inhibitor, Gin CLI_RS00400 IPR000310 Orn/Lys/Arg decarboxylase, major domain CLI_RS00400 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CLI_RS00400 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS00400 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS00400 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS00405 IPR018094 Thymidylate kinase CLI_RS00405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00410 IPR010375 Protein of unknown function DUF970 CLI_RS00410 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLI_RS00410 IPR015867 Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal CLI_RS00415 IPR015199 DNA polymerase III, delta subunit, C-terminal CLI_RS00415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00420 IPR007557 PSP1, C-terminal CLI_RS00425 IPR006121 Heavy metal-associated domain, HMA CLI_RS00430 IPR000813 7Fe ferredoxin CLI_RS00430 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS00430 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS00435 IPR007848 Methyltransferase small domain CLI_RS00435 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS00440 IPR000878 Tetrapyrrole methylase CLI_RS00440 IPR008189 rRNA small subunit methyltransferase I CLI_RS00440 IPR014776 Tetrapyrrole methylase, subdomain 2 CLI_RS00440 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS00440 IPR018063 SAM-dependent methyltransferase RsmI, conserved site CLI_RS00445 IPR000064 Endopeptidase, NLPC/P60 domain CLI_RS00450 IPR007159 AbrB-like domain CLI_RS00455 IPR011992 EF-hand domain pair CLI_RS00455 IPR014975 Protein of unknown function DUF1836 CLI_RS00460 IPR003876 Arginine deiminase CLI_RS00460 IPR033199 CLI_RS00460 CLI_RS00465 IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase CLI_RS00465 IPR020555 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, conserved site CLI_RS00475 IPR002509 Polysaccharide deacetylase CLI_RS00475 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS00485 IPR011642 Nucleoside recognition Gate CLI_RS00490 IPR011642 Nucleoside recognition Gate CLI_RS00495 IPR002528 Multi antimicrobial extrusion protein CLI_RS00500 IPR005122 Uracil-DNA glycosylase-like CLI_RS00500 IPR005273 Uracil-DNA glycosylase, family 4 domain CLI_RS00505 IPR000835 MarR-type HTH domain CLI_RS00505 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00510 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS00510 IPR002547 tRNA-binding domain CLI_RS00510 IPR004495 Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal CLI_RS00510 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLI_RS00510 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00510 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLI_RS00510 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00510 IPR014758 Methionyl-tRNA synthetase CLI_RS00510 IPR015413 Methionyl/Leucyl tRNA synthetase CLI_RS00510 IPR023457 Methionine-tRNA synthetase, type 2 CLI_RS00515 IPR007383 Protein of unknown function DUF445 CLI_RS00520 IPR001130 TatD family CLI_RS00520 IPR015991 Uncharacterised deoxyribonuclease TatD-type CLI_RS00520 IPR018228 Deoxyribonuclease, TatD-related, conserved site CLI_RS00520 IPR032466 CLI_RS00520 CLI_RS00525 IPR007137 Domain of unknown function DUF348 CLI_RS00525 IPR009009 RlpA-like double-psi beta-barrel domain CLI_RS00525 IPR010611 3D domain CLI_RS00525 IPR011098 G5 domain CLI_RS00530 IPR004466 Ribonuclease M5 CLI_RS00530 IPR006171 Toprim domain CLI_RS00530 IPR025156 Ribonuclease M5, C-terminal domain CLI_RS00535 IPR001737 Ribosomal RNA adenine methylase transferase CLI_RS00535 IPR011530 Ribosomal RNA adenine dimethylase CLI_RS00535 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CLI_RS00535 IPR020598 Ribosomal RNA adenine methylase transferase, N-terminal CLI_RS00535 IPR023165 rRNA adenine dimethylase-like CLI_RS00535 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS00555 IPR006143 RND efflux pump, membrane fusion protein CLI_RS00555 IPR032317 CLI_RS00555 CLI_RS00560 IPR003439 ABC transporter-like CLI_RS00560 IPR003593 AAA+ ATPase domain CLI_RS00560 IPR017871 ABC transporter, conserved site CLI_RS00560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00565 IPR003838 Permease FtsX-like CLI_RS00565 IPR025857 MacB-like periplasmic core domain CLI_RS00570 IPR000808 Mrp, conserved site CLI_RS00570 IPR019591 Mrp/NBP35 ATP-binding protein CLI_RS00570 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00575 IPR001080 3Fe-4S ferredoxin CLI_RS00590 IPR000160 GGDEF domain CLI_RS00590 IPR029016 GAF domain-like CLI_RS00590 IPR029787 Nucleotide cyclase CLI_RS00595 IPR003416 MgtC/SapB/SrpB transporter CLI_RS00600 IPR005144 ATP-cone CLI_RS00600 IPR012833 Ribonucleoside-triphosphate reductase, anaerobic CLI_RS00605 IPR001989 Radical-activating enzyme, conserved site CLI_RS00605 IPR007197 Radical SAM CLI_RS00605 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CLI_RS00615 IPR002004 Polyadenylate-binding protein/Hyperplastic disc protein CLI_RS00615 IPR008316 Uncharacterised conserved protein UCP029876 CLI_RS00620 IPR005149 Transcription regulator PadR N-terminal CLI_RS00620 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS00625 IPR001279 Beta-lactamase-like CLI_RS00630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS00630 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLI_RS00630 IPR002301 Isoleucine-tRNA ligase CLI_RS00630 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLI_RS00630 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLI_RS00630 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLI_RS00630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00630 IPR023586 Isoleucine-tRNA ligase, type 2 CLI_RS00635 IPR000843 Transcription regulator HTH, LacI CLI_RS00635 IPR001761 Periplasmic binding protein/LacI sugar binding domain CLI_RS00635 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS00635 IPR028082 Periplasmic binding protein-like I CLI_RS00640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00645 IPR005835 Nucleotidyl transferase CLI_RS00645 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS00650 IPR002822 Uncharacterised protein family UPF0272 CLI_RS00655 IPR005232 Conserved hypothetical protein CHP00268 CLI_RS00655 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00655 IPR022310 NAD/GMP synthase CLI_RS00660 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain CLI_RS00665 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS00665 IPR007197 Radical SAM CLI_RS00665 IPR013785 Aldolase-type TIM barrel CLI_RS00675 IPR001296 Glycosyl transferase, family 1 CLI_RS00675 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS00680 IPR002575 Aminoglycoside phosphotransferase CLI_RS00680 IPR011009 Protein kinase-like domain CLI_RS00680 IPR014255 Spore coat protein CotS CLI_RS00695 IPR011009 Protein kinase-like domain CLI_RS00695 IPR014255 Spore coat protein CotS CLI_RS00700 IPR001296 Glycosyl transferase, family 1 CLI_RS00700 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS00705 IPR011009 Protein kinase-like domain CLI_RS00705 IPR014255 Spore coat protein CotS CLI_RS00710 IPR008764 Peptidase U57, YabG CLI_RS00715 IPR009366 Veg CLI_RS00720 IPR018392 LysM domain CLI_RS00720 IPR024300 Domain of unknown function DUF3794 CLI_RS00730 IPR005320 Peptidase S51 CLI_RS00730 IPR011811 Peptidase S51, cyanophycinase CLI_RS00730 IPR029062 Class I glutamine amidotransferase-like CLI_RS00735 IPR004101 Mur ligase, C-terminal CLI_RS00735 IPR011810 Cyanophycin synthetase CLI_RS00735 IPR013221 Mur ligase, central CLI_RS00735 IPR013651 ATP-grasp fold, RimK-type CLI_RS00735 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS00735 IPR018109 Folylpolyglutamate synthetase, conserved site CLI_RS00740 IPR004424 4-diphosphocytidyl-2C-methyl-D-erythritol kinase CLI_RS00740 IPR006204 GHMP kinase N-terminal domain CLI_RS00740 IPR013750 GHMP kinase, C-terminal domain CLI_RS00740 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS00740 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS00755 IPR004995 Bacillus/Clostridium Ger spore germination protein CLI_RS00760 IPR004761 Spore germination GerAB CLI_RS00765 IPR008844 Spore germination GerAC CLI_RS00770 IPR014202 Sporulation stage II, protein R CLI_RS00775 IPR007235 Glycosyl transferase, family 28, C-terminal CLI_RS00775 IPR009695 Diacylglycerol glucosyltransferase, N-terminal CLI_RS00780 IPR014239 Spore germination YpeB CLI_RS00780 IPR025711 PepSY domain CLI_RS00785 IPR004506 tRNA-specific 2-thiouridylase CLI_RS00785 IPR008532 Domain of unknown function DUF814 CLI_RS00785 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00785 IPR020536 Thil, AANH domain CLI_RS00790 IPR011038 Calycin-like CLI_RS00790 IPR012674 Calycin CLI_RS00790 IPR015231 Protein of unknown function DUF1934 CLI_RS00800 IPR004468 CTP synthase CLI_RS00800 IPR017456 CTP synthase, N-terminal CLI_RS00800 IPR017926 Glutamine amidotransferase CLI_RS00800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00800 IPR029062 Class I glutamine amidotransferase-like CLI_RS00810 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLI_RS00810 IPR003593 AAA+ ATPase domain CLI_RS00810 IPR004665 Transcription termination factor Rho CLI_RS00810 IPR011112 Rho termination factor, N-terminal CLI_RS00810 IPR011113 Rho termination factor, RNA-binding CLI_RS00810 IPR011129 Cold shock protein CLI_RS00810 IPR012340 Nucleic acid-binding, OB-fold CLI_RS00810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00815 IPR002150 Ribosomal protein L31 CLI_RS00815 IPR027491 Ribosomal protein L31 type A CLI_RS00820 IPR001267 Thymidine kinase CLI_RS00820 IPR020633 Thymidine kinase, conserved site CLI_RS00820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00825 IPR010787 Protein of unknown function DUF1385 CLI_RS00830 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLI_RS00830 IPR004556 Modification methylase HemK CLI_RS00830 IPR007848 Methyltransferase small domain CLI_RS00830 IPR019874 Protein-(glutamine-N5) methyltransferase, release factor-specific CLI_RS00830 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS00835 IPR000352 Peptide chain release factor class I/class II CLI_RS00835 IPR004373 Peptide chain release factor 1 CLI_RS00835 IPR005139 Peptide chain release factor CLI_RS00835 IPR014720 Double-stranded RNA-binding domain CLI_RS00845 IPR003689 Zinc/iron permease CLI_RS00850 IPR005145 Putative GTP-binding controlling metal-binding domain CLI_RS00850 IPR006070 YrdC-like domain CLI_RS00850 IPR010923 tRNA threonylcarbamoyladenosine biosynthesis protein SUA5 CLI_RS00850 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS00855 IPR017867 Protein-tyrosine phosphatase, low molecular weight CLI_RS00855 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS00860 IPR003500 Sugar-phosphate isomerase, RpiB/LacA/LacB family CLI_RS00860 IPR004785 Ribose 5-phosphate isomerase B CLI_RS00865 IPR005765 Uracil phosphoribosyl transferase CLI_RS00865 IPR029057 Phosphoribosyltransferase-like CLI_RS00870 IPR002125 CMP/dCMP deaminase, zinc-binding CLI_RS00870 IPR015517 Deoxycytidylate deaminase-related CLI_RS00870 IPR016192 APOBEC/CMP deaminase, zinc-binding CLI_RS00870 IPR016193 Cytidine deaminase-like CLI_RS00870 IPR016473 Deoxycytidylate deaminase CLI_RS00875 IPR000715 Glycosyl transferase, family 4 CLI_RS00875 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CLI_RS00880 IPR003331 UDP-N-acetylglucosamine 2-epimerase CLI_RS00880 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type CLI_RS00885 IPR005598 ATP synthase protein I CLI_RS00890 IPR000568 ATPase, F0 complex, subunit A CLI_RS00890 IPR023011 ATPase, F0 complex, subunit A, active site CLI_RS00895 IPR000454 ATPase, F0 complex, subunit C CLI_RS00895 IPR002379 V-ATPase proteolipid subunit C-like domain CLI_RS00895 IPR005953 ATPase, F0 complex, subunit C, bacterial/chloroplast CLI_RS00895 IPR020537 ATPase, F0 complex, subunit C, DCCD-binding site CLI_RS00900 IPR002146 ATPase, F0 complex, subunit B/B', bacterial/chloroplast CLI_RS00900 IPR005864 ATPase, F0 complex, subunit B, bacterial CLI_RS00900 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS00905 IPR000711 ATPase, OSCP/delta subunit CLI_RS00905 IPR020781 ATPase, OSCP/delta subunit, conserved site CLI_RS00905 IPR026015 F1F0 ATP synthase OSCP/delta subunit, N-terminal domain CLI_RS00910 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLI_RS00910 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CLI_RS00910 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLI_RS00910 IPR005294 ATPase, F1 complex, alpha subunit CLI_RS00910 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLI_RS00910 IPR023366 ATP synthase subunit alpha-like domain CLI_RS00910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00915 IPR000131 ATPase, F1 complex, gamma subunit CLI_RS00915 IPR023632 ATPase, F1 complex, gamma subunit conserved site CLI_RS00915 IPR023633 ATPase, F1 complex, gamma subunit domain CLI_RS00920 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLI_RS00920 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CLI_RS00920 IPR003593 AAA+ ATPase domain CLI_RS00920 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLI_RS00920 IPR005722 ATPase, F1 complex, beta subunit CLI_RS00920 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLI_RS00920 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CLI_RS00920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS00925 IPR001469 ATPase, F1 complex, delta/epsilon subunit CLI_RS00925 IPR020546 ATPase, F1 complex, delta/epsilon subunit, N-terminal CLI_RS00925 IPR020547 ATPase, F1 complex, delta/epsilon subunit, C-terminal domain CLI_RS00930 IPR014794 Protein of unknown function DUF1779 CLI_RS00935 IPR001986 Enolpyruvate transferase domain CLI_RS00935 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CLI_RS00935 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLI_RS00940 IPR013486 Sporulation stage II protein D, amidase enhancer LytB CLI_RS00940 IPR013693 Sporulation stage II protein D, amidase enhancer LytB N-terminal CLI_RS00940 IPR014225 Sporulation stage II, protein D firmicutes CLI_RS00945 IPR011055 Duplicated hybrid motif CLI_RS00945 IPR016047 Peptidase M23 CLI_RS00950 IPR009057 Homeodomain-like CLI_RS00950 IPR014208 Sporulation stage III, transcriptional regulator SpoIIID CLI_RS00950 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLI_RS00955 IPR004753 Cell shape determining protein MreB/Mrl CLI_RS00960 IPR009665 Protein of unknown function DUF1256 CLI_RS00960 IPR023430 Peptidase HybD-like domain CLI_RS00965 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CLI_RS00965 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CLI_RS00965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS00995 IPR002133 S-adenosylmethionine synthetase CLI_RS00995 IPR022628 S-adenosylmethionine synthetase, N-terminal CLI_RS00995 IPR022629 S-adenosylmethionine synthetase, central domain CLI_RS00995 IPR022630 S-adenosylmethionine synthetase, C-terminal CLI_RS00995 IPR022631 S-adenosylmethionine synthetase, conserved site CLI_RS00995 IPR022636 S-adenosylmethionine synthetase superfamily CLI_RS01000 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLI_RS01000 IPR003593 AAA+ ATPase domain CLI_RS01000 IPR006345 DNA helicase, RecD/TraA type CLI_RS01000 IPR010994 RuvA domain 2-like CLI_RS01000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01000 IPR027785 UvrD-like helicase C-terminal domain CLI_RS01000 IPR029493 RecD helicase-like helix-hairpin-helix domain CLI_RS01010 IPR000836 Phosphoribosyltransferase domain CLI_RS01010 IPR029057 Phosphoribosyltransferase-like CLI_RS01015 IPR003489 Ribosomal protein S30Ae/sigma 54 modulation protein CLI_RS01015 IPR032528 CLI_RS01015 CLI_RS01020 IPR000185 Protein translocase subunit SecA CLI_RS01020 IPR004027 SEC-C motif CLI_RS01020 IPR011115 SecA DEAD-like, N-terminal CLI_RS01020 IPR011116 SecA Wing/Scaffold CLI_RS01020 IPR011130 SecA preprotein, cross-linking domain CLI_RS01020 IPR020937 SecA conserved site CLI_RS01020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01030 IPR000352 Peptide chain release factor class I/class II CLI_RS01030 IPR004374 Peptide chain release factor 2 CLI_RS01030 IPR005139 Peptide chain release factor CLI_RS01030 IPR014720 Double-stranded RNA-binding domain CLI_RS01035 IPR007484 Peptidase M28 CLI_RS01040 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS01040 IPR006641 YqgF/RNase H-like domain CLI_RS01040 IPR010994 RuvA domain 2-like CLI_RS01040 IPR012337 Ribonuclease H-like domain CLI_RS01040 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01040 IPR018974 Tex-like protein, N-terminal CLI_RS01040 IPR022967 RNA-binding domain, S1 CLI_RS01040 IPR023097 Tex RuvX-like domain CLI_RS01040 IPR023319 Tex-like protein, HTH domain CLI_RS01040 IPR023323 Tex-like domain CLI_RS01040 IPR032639 CLI_RS01040 CLI_RS01045 IPR024529 ECF transporter, substrate-specific component CLI_RS01045 IPR025720 ECF transporter, Riboflavin transporter RibU CLI_RS01055 IPR006135 Type III secretion system substrate exporter CLI_RS01055 IPR029025 Type III secretion system substrate exporter, C-terminal CLI_RS01060 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLI_RS01060 IPR014578 Predicted phosphoesterase, CT488 type CLI_RS01060 IPR029052 Metallo-dependent phosphatase-like CLI_RS01065 IPR001845 HTH ArsR-type DNA-binding domain CLI_RS01065 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01070 IPR001455 TusA-like domain CLI_RS01070 IPR001763 Rhodanese-like domain CLI_RS01070 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLI_RS01070 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLI_RS01070 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS01070 IPR027396 DsrEFH-like CLI_RS01070 IPR032836 CLI_RS01070 CLI_RS01075 IPR018708 Protein of unknown function DUF2225 CLI_RS01080 IPR007685 RelA/SpoT CLI_RS01090 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLI_RS01090 IPR002302 Leucine-tRNA ligase CLI_RS01090 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLI_RS01090 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLI_RS01090 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLI_RS01090 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01090 IPR015413 Methionyl/Leucyl tRNA synthetase CLI_RS01090 IPR025709 Leucyl-tRNA synthetase, editing domain CLI_RS01095 IPR001763 Rhodanese-like domain CLI_RS01110 IPR001623 DnaJ domain CLI_RS01110 IPR011990 Tetratricopeptide-like helical domain CLI_RS01120 IPR023577 CYTH-like domain CLI_RS01120 IPR033469 CLI_RS01120 CLI_RS01125 IPR007358 Nucleoid-associated protein NdpA CLI_RS01130 IPR000771 Ketose-bisphosphate aldolase, class-II CLI_RS01130 IPR011289 Fructose-1,6-bisphosphate aldolase, class 2 CLI_RS01130 IPR013785 Aldolase-type TIM barrel CLI_RS01135 IPR025373 Protein of unknown function DUF4363 CLI_RS01140 IPR007353 Protein of unknown function DUF421 CLI_RS01140 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS01145 IPR006083 Phosphoribulokinase/uridine kinase CLI_RS01145 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CLI_RS01145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01155 IPR000462 CDP-alcohol phosphatidyltransferase CLI_RS01155 IPR004533 CDP-diacylglycerol--serine O-phosphatidyltransferase CLI_RS01160 IPR000644 CBS domain CLI_RS01165 IPR001206 Diacylglycerol kinase, catalytic domain CLI_RS01165 IPR005218 Diacylglycerol/lipid kinase CLI_RS01165 IPR016064 ATP-NAD kinase-like domain CLI_RS01175 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS01175 IPR007197 Radical SAM CLI_RS01175 IPR013704 Uncharacterised protein family UPF0313, N-terminal CLI_RS01175 IPR022946 Uncharacterised protein family UPF0313 CLI_RS01175 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS01175 IPR024560 Uncharacterised protein family UPF0313, C-terminal CLI_RS01180 IPR000644 CBS domain CLI_RS01180 IPR006668 Magnesium transporter, MgtE intracellular domain CLI_RS01180 IPR027275 PRC-barrel domain CLI_RS01185 IPR002477 Peptidoglycan binding-like CLI_RS01185 IPR011105 Cell wall hydrolase, SleB CLI_RS01185 IPR014224 Spore cortex-lytic enzyme SleB CLI_RS01190 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLI_RS01190 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLI_RS01190 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS01190 IPR005856 Cysteine synthase K/M CLI_RS01190 IPR005859 Cysteine synthase A CLI_RS01195 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS01195 IPR005881 Serine O-acetyltransferase CLI_RS01195 IPR011004 Trimeric LpxA-like CLI_RS01195 IPR018357 Hexapeptide transferase, conserved site CLI_RS01200 IPR004453 Epoxyqueuosine reductase QueG CLI_RS01200 IPR009051 Alpha-helical ferredoxin CLI_RS01200 IPR013542 Domain of unknown function DUF1730 CLI_RS01200 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS01205 IPR002123 Phospholipid/glycerol acyltransferase CLI_RS01210 IPR000445 Helix-hairpin-helix motif CLI_RS01210 IPR003265 HhH-GPD domain CLI_RS01210 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CLI_RS01210 IPR004035 Endonuclease III, iron-sulphur binding site CLI_RS01210 IPR004036 Endonuclease III-like, conserved site-2 CLI_RS01210 IPR005759 Endonuclease III CLI_RS01210 IPR011257 DNA glycosylase CLI_RS01210 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLI_RS01215 IPR001891 Malic oxidoreductase CLI_RS01215 IPR012301 Malic enzyme, N-terminal domain CLI_RS01215 IPR012302 Malic enzyme, NAD-binding CLI_RS01215 IPR015884 Malic enzyme, conserved site CLI_RS01215 IPR016040 NAD(P)-binding domain CLI_RS01220 IPR001453 Molybdopterin binding domain CLI_RS01220 IPR008135 Competence-induced protein CinA CLI_RS01220 IPR008136 CinA, C-terminal CLI_RS01225 IPR019149 Protein of unknown function DUF2048 CLI_RS01225 IPR022742 Putative lysophospholipase CLI_RS01225 IPR029058 Alpha/Beta hydrolase fold CLI_RS01230 IPR008007 Peptidase M42 CLI_RS01230 IPR023367 Peptidase M42, domain 2 CLI_RS01235 IPR007391 Vancomycin resistance VanW CLI_RS01235 IPR022029 Putative peptidoglycan binding domain CLI_RS01240 IPR007391 Vancomycin resistance VanW CLI_RS01240 IPR011098 G5 domain CLI_RS01240 IPR022029 Putative peptidoglycan binding domain CLI_RS01245 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS01245 IPR023897 Spore photoproduct lyase CLI_RS01250 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLI_RS01250 IPR016914 tRNA (cytidine/uridine-2'-O-)-methyltransferase CLI_RS01250 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS01250 IPR029028 Alpha/beta knot methyltransferases CLI_RS01255 IPR003797 DegV CLI_RS01260 IPR003760 Basic membrane lipoprotein CLI_RS01260 IPR028082 Periplasmic binding protein-like I CLI_RS01265 IPR003439 ABC transporter-like CLI_RS01265 IPR003593 AAA+ ATPase domain CLI_RS01265 IPR017871 ABC transporter, conserved site CLI_RS01265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01270 IPR001851 ABC transporter, permease CLI_RS01275 IPR001851 ABC transporter, permease CLI_RS01280 IPR002509 Polysaccharide deacetylase CLI_RS01280 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS01285 IPR000394 RNA polymerase sigma factor 54 CLI_RS01285 IPR007046 RNA polymerase sigma factor 54, core-binding CLI_RS01285 IPR007634 RNA polymerase sigma factor 54, DNA-binding CLI_RS01285 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01290 IPR007324 Sugar-binding domain, putative CLI_RS01290 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01295 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CLI_RS01295 IPR016040 NAD(P)-binding domain CLI_RS01295 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CLI_RS01295 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CLI_RS01295 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CLI_RS01295 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CLI_RS01300 IPR001576 Phosphoglycerate kinase CLI_RS01300 IPR015824 Phosphoglycerate kinase, N-terminal CLI_RS01300 IPR015901 Phosphoglycerate kinase, C-terminal CLI_RS01300 IPR015911 Phosphoglycerate kinase, conserved site CLI_RS01305 IPR000652 Triosephosphate isomerase CLI_RS01305 IPR013785 Aldolase-type TIM barrel CLI_RS01305 IPR020861 Triosephosphate isomerase, active site CLI_RS01305 IPR022896 Triosephosphate isomerase, bacterial/eukaryotic CLI_RS01310 IPR005995 Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent CLI_RS01310 IPR006124 Metalloenzyme CLI_RS01310 IPR011258 BPG-independent PGAM, N-terminal CLI_RS01310 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLI_RS01310 IPR017850 Alkaline-phosphatase-like, core domain CLI_RS01315 IPR000941 Enolase CLI_RS01315 IPR020809 Enolase, conserved site CLI_RS01315 IPR020810 Enolase, C-terminal CLI_RS01315 IPR020811 Enolase, N-terminal CLI_RS01315 IPR029017 Enolase N-terminal domain-like CLI_RS01315 IPR029065 Enolase C-terminal domain-like CLI_RS01320 IPR004692 Preprotein translocase SecG subunit CLI_RS01325 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS01325 IPR004476 Ribonuclease II/ribonuclease R CLI_RS01325 IPR011129 Cold shock protein CLI_RS01325 IPR011805 Ribonuclease R CLI_RS01325 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01325 IPR013223 Ribonuclease B, N-terminal OB domain CLI_RS01325 IPR022967 RNA-binding domain, S1 CLI_RS01330 IPR002828 Survival protein SurE-like phosphatase/nucleotidase CLI_RS01330 IPR030048 CLI_RS01330 CLI_RS01335 IPR000037 SsrA-binding protein CLI_RS01335 IPR020081 SsrA-binding protein, conserved site CLI_RS01335 IPR023620 Small protein B CLI_RS01340 IPR001991 Sodium:dicarboxylate symporter CLI_RS01345 IPR011235 MepB-like CLI_RS01350 IPR027434 Homing endonuclease CLI_RS01355 IPR006094 FAD linked oxidase, N-terminal CLI_RS01355 IPR012951 Berberine/berberine-like CLI_RS01355 IPR016166 FAD-binding, type 2 CLI_RS01355 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS01355 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS01360 IPR013216 Methyltransferase type 11 CLI_RS01360 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS01365 IPR014710 RmlC-like jelly roll fold CLI_RS01365 IPR018490 Cyclic nucleotide-binding-like CLI_RS01370 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01370 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS01375 IPR013785 Aldolase-type TIM barrel CLI_RS01385 IPR002129 Pyridoxal phosphate-dependent decarboxylase CLI_RS01385 IPR010977 Aromatic-L-amino-acid decarboxylase CLI_RS01385 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS01385 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS01385 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS01390 IPR001029 Flagellin, D0/D1 domain CLI_RS01390 IPR001492 Flagellin CLI_RS01395 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01395 IPR016119 Bromoperoxidase/chloroperoxidase, C-terminal CLI_RS01400 IPR011051 RmlC-like cupin domain CLI_RS01400 IPR013096 Cupin 2, conserved barrel CLI_RS01400 IPR014710 RmlC-like jelly roll fold CLI_RS01405 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01405 IPR001867 Signal transduction response regulator, C-terminal CLI_RS01405 IPR011006 CheY-like superfamily CLI_RS01405 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01405 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS01410 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01415 IPR003439 ABC transporter-like CLI_RS01415 IPR003593 AAA+ ATPase domain CLI_RS01415 IPR017871 ABC transporter, conserved site CLI_RS01415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01420 IPR003838 Permease FtsX-like CLI_RS01420 IPR027022 ABC transporter permease protein, BceB-type CLI_RS01425 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS01425 IPR029058 Alpha/Beta hydrolase fold CLI_RS01430 IPR008972 Cupredoxin CLI_RS01430 IPR011706 Multicopper oxidase, type 2 CLI_RS01440 IPR001891 Malic oxidoreductase CLI_RS01440 IPR012301 Malic enzyme, N-terminal domain CLI_RS01440 IPR012302 Malic enzyme, NAD-binding CLI_RS01440 IPR015884 Malic enzyme, conserved site CLI_RS01440 IPR016040 NAD(P)-binding domain CLI_RS01445 IPR004684 2-keto-3-deoxygluconate permease CLI_RS01450 IPR000014 PAS domain CLI_RS01450 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01450 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS01450 IPR016120 Signal transduction histidine kinase, sporulation regulator SpoOB CLI_RS01450 IPR029151 Periplasmic sensor domain-like CLI_RS01450 IPR033463 CLI_RS01450 CLI_RS01455 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01455 IPR011006 CheY-like superfamily CLI_RS01455 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01455 IPR013196 Helix-turn-helix, type 11 CLI_RS01455 IPR024187 Signal transduction response regulator, citrate/malate metabolism CLI_RS01460 IPR002293 Amino acid/polyamine transporter I CLI_RS01460 IPR004841 Amino acid permease/ SLC12A domain CLI_RS01465 IPR001279 Beta-lactamase-like CLI_RS01470 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS01470 IPR011004 Trimeric LpxA-like CLI_RS01470 IPR018357 Hexapeptide transferase, conserved site CLI_RS01475 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01480 IPR002125 CMP/dCMP deaminase, zinc-binding CLI_RS01480 IPR016192 APOBEC/CMP deaminase, zinc-binding CLI_RS01480 IPR016193 Cytidine deaminase-like CLI_RS01485 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01490 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CLI_RS01490 IPR024072 Dihydrofolate reductase-like domain CLI_RS01495 IPR001357 BRCT domain CLI_RS01495 IPR012337 Ribonuclease H-like domain CLI_RS01495 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS01505 IPR000868 Isochorismatase-like CLI_RS01510 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS01510 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLI_RS01515 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLI_RS01515 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS01515 IPR016166 FAD-binding, type 2 CLI_RS01515 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS01515 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS01520 IPR001041 2Fe-2S ferredoxin-type domain CLI_RS01520 IPR002888 [2Fe-2S]-binding CLI_RS01520 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLI_RS01520 IPR012675 Beta-grasp domain CLI_RS01530 IPR003834 Cytochrome c assembly protein, transmembrane domain CLI_RS01535 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLI_RS01535 IPR012336 Thioredoxin-like fold CLI_RS01540 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01540 IPR001867 Signal transduction response regulator, C-terminal CLI_RS01540 IPR011006 CheY-like superfamily CLI_RS01540 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01545 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01545 IPR003660 HAMP linker domain CLI_RS01545 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS01545 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01550 IPR006094 FAD linked oxidase, N-terminal CLI_RS01550 IPR012951 Berberine/berberine-like CLI_RS01550 IPR016166 FAD-binding, type 2 CLI_RS01550 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS01550 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS01555 IPR001088 Glycoside hydrolase, family 4 CLI_RS01555 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLI_RS01555 IPR016040 NAD(P)-binding domain CLI_RS01555 IPR019802 Glycoside hydrolase, family 4, conserved site CLI_RS01555 IPR022616 Glycosyl hydrolase, family 4, C-terminal CLI_RS01560 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS01560 IPR003352 Phosphotransferase system, EIIC CLI_RS01560 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS01565 IPR000281 Helix-turn-helix protein RpiR CLI_RS01565 IPR001347 Sugar isomerase (SIS) CLI_RS01565 IPR009057 Homeodomain-like CLI_RS01565 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01570 IPR000281 Helix-turn-helix protein RpiR CLI_RS01570 IPR001347 Sugar isomerase (SIS) CLI_RS01570 IPR009057 Homeodomain-like CLI_RS01570 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01575 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS01575 IPR011055 Duplicated hybrid motif CLI_RS01580 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01580 IPR001867 Signal transduction response regulator, C-terminal CLI_RS01580 IPR011006 CheY-like superfamily CLI_RS01580 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01580 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS01585 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01585 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01590 IPR003439 ABC transporter-like CLI_RS01590 IPR003593 AAA+ ATPase domain CLI_RS01590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01595 IPR003838 Permease FtsX-like CLI_RS01595 IPR027022 ABC transporter permease protein, BceB-type CLI_RS01605 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS01605 IPR003352 Phosphotransferase system, EIIC CLI_RS01605 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS01610 IPR001088 Glycoside hydrolase, family 4 CLI_RS01610 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLI_RS01610 IPR016040 NAD(P)-binding domain CLI_RS01610 IPR019802 Glycoside hydrolase, family 4, conserved site CLI_RS01610 IPR022616 Glycosyl hydrolase, family 4, C-terminal CLI_RS01615 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS01615 IPR011055 Duplicated hybrid motif CLI_RS01620 IPR000281 Helix-turn-helix protein RpiR CLI_RS01620 IPR001347 Sugar isomerase (SIS) CLI_RS01620 IPR009057 Homeodomain-like CLI_RS01620 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01630 IPR002059 Cold-shock protein, DNA-binding CLI_RS01630 IPR011129 Cold shock protein CLI_RS01630 IPR012156 Cold shock, CspA CLI_RS01630 IPR012340 Nucleic acid-binding, OB-fold CLI_RS01630 IPR019844 Cold-shock conserved site CLI_RS01635 IPR010406 Protein of unknown function DUF1003 CLI_RS01640 IPR000944 Transcription regulator Rrf2-like CLI_RS01640 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01645 IPR001853 DSBA-like thioredoxin domain CLI_RS01645 IPR012336 Thioredoxin-like fold CLI_RS01650 IPR016040 NAD(P)-binding domain CLI_RS01655 IPR000281 Helix-turn-helix protein RpiR CLI_RS01655 IPR001347 Sugar isomerase (SIS) CLI_RS01655 IPR009057 Homeodomain-like CLI_RS01655 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01660 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS01660 IPR003352 Phosphotransferase system, EIIC CLI_RS01660 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS01665 IPR001088 Glycoside hydrolase, family 4 CLI_RS01665 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLI_RS01665 IPR016040 NAD(P)-binding domain CLI_RS01665 IPR019802 Glycoside hydrolase, family 4, conserved site CLI_RS01665 IPR022616 Glycosyl hydrolase, family 4, C-terminal CLI_RS01670 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS01670 IPR011055 Duplicated hybrid motif CLI_RS01675 IPR000581 Dihydroxy-acid/6-phosphogluconate dehydratase CLI_RS01675 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLI_RS01675 IPR020558 Dihydroxy-acid/6-phosphogluconate dehydratase, conserved site CLI_RS01680 IPR000887 KDPG/KHG aldolase CLI_RS01680 IPR013785 Aldolase-type TIM barrel CLI_RS01685 IPR011611 Carbohydrate kinase PfkB CLI_RS01685 IPR029056 Ribokinase-like CLI_RS01690 IPR006679 Adenine deaminase CLI_RS01690 IPR006680 Amidohydrolase 1 CLI_RS01690 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS01690 IPR026912 Adenine deaminase C-terminal domain CLI_RS01690 IPR032466 CLI_RS01690 CLI_RS01695 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01695 IPR001867 Signal transduction response regulator, C-terminal CLI_RS01695 IPR011006 CheY-like superfamily CLI_RS01695 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01695 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS01700 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01700 IPR003660 HAMP linker domain CLI_RS01700 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS01700 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01705 IPR001173 Glycosyltransferase 2-like CLI_RS01705 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS01710 IPR007267 GtrA-like protein CLI_RS01720 IPR009057 Homeodomain-like CLI_RS01720 IPR018060 DNA binding HTH domain, AraC-type CLI_RS01720 IPR020449 Transcription regulator HTH, AraC- type CLI_RS01725 IPR002491 ABC transporter periplasmic binding domain CLI_RS01730 IPR000522 ABC transporter, permease protein CLI_RS01730 IPR029022 ABC transporter, BtuC-like CLI_RS01735 IPR003439 ABC transporter-like CLI_RS01735 IPR003593 AAA+ ATPase domain CLI_RS01735 IPR017871 ABC transporter, conserved site CLI_RS01735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01740 IPR002528 Multi antimicrobial extrusion protein CLI_RS01745 IPR009057 Homeodomain-like CLI_RS01745 IPR018060 DNA binding HTH domain, AraC-type CLI_RS01745 IPR018062 HTH domain AraC-type, conserved site CLI_RS01745 IPR020449 Transcription regulator HTH, AraC- type CLI_RS01750 IPR002491 ABC transporter periplasmic binding domain CLI_RS01755 IPR002491 ABC transporter periplasmic binding domain CLI_RS01760 IPR000522 ABC transporter, permease protein CLI_RS01760 IPR029022 ABC transporter, BtuC-like CLI_RS01765 IPR000522 ABC transporter, permease protein CLI_RS01765 IPR029022 ABC transporter, BtuC-like CLI_RS01770 IPR003439 ABC transporter-like CLI_RS01770 IPR003593 AAA+ ATPase domain CLI_RS01770 IPR017871 ABC transporter, conserved site CLI_RS01770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01775 IPR003439 ABC transporter-like CLI_RS01775 IPR003593 AAA+ ATPase domain CLI_RS01775 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS01775 IPR017871 ABC transporter, conserved site CLI_RS01775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01780 IPR006042 Xanthine/uracil permease CLI_RS01780 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS01780 IPR017588 Xanthine permease CLI_RS01785 IPR000836 Phosphoribosyltransferase domain CLI_RS01785 IPR010079 Xanthine phosphoribosyltransferase CLI_RS01785 IPR029057 Phosphoribosyltransferase-like CLI_RS01790 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01790 IPR001867 Signal transduction response regulator, C-terminal CLI_RS01790 IPR011006 CheY-like superfamily CLI_RS01790 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01790 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS01795 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01795 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01800 IPR003824 Undecaprenyl-diphosphatase UppP CLI_RS01805 IPR003439 ABC transporter-like CLI_RS01805 IPR003593 AAA+ ATPase domain CLI_RS01805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS01810 IPR003838 Permease FtsX-like CLI_RS01810 IPR027022 ABC transporter permease protein, BceB-type CLI_RS01815 IPR002934 Nucleotidyl transferase domain CLI_RS01820 IPR008201 Protein of unknown function DUF86 CLI_RS01825 IPR005538 LrgA/CidA family CLI_RS01830 IPR007300 CidB/LrgB family CLI_RS01840 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS01840 IPR007197 Radical SAM CLI_RS01840 IPR013785 Aldolase-type TIM barrel CLI_RS01845 IPR014999 Uncharacterised protein family UPF0371 CLI_RS01860 IPR006741 Accessory gene regulator B CLI_RS01865 IPR009229 Staphylococcal AgrD CLI_RS01870 IPR000160 GGDEF domain CLI_RS01870 IPR003607 HD/PDEase domain CLI_RS01870 IPR006674 HD domain CLI_RS01870 IPR029787 Nucleotide cyclase CLI_RS01875 IPR000182 GNAT domain CLI_RS01875 IPR016181 Acyl-CoA N-acyltransferase CLI_RS01885 IPR000014 PAS domain CLI_RS01885 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01885 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS01885 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01895 IPR006741 Accessory gene regulator B CLI_RS01900 IPR009229 Staphylococcal AgrD CLI_RS01905 IPR000014 PAS domain CLI_RS01905 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01905 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS01905 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01910 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CLI_RS01910 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CLI_RS01910 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS01915 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS01915 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS01915 IPR011051 RmlC-like cupin domain CLI_RS01915 IPR013096 Cupin 2, conserved barrel CLI_RS01915 IPR014710 RmlC-like jelly roll fold CLI_RS01920 IPR002293 Amino acid/polyamine transporter I CLI_RS01925 IPR000587 Creatinase, N-terminal CLI_RS01925 IPR000994 Peptidase M24, structural domain CLI_RS01925 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS01925 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS01930 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS01930 IPR012079 Bifunctional aldehyde-alcohol dehydrogenase CLI_RS01930 IPR015590 Aldehyde dehydrogenase domain CLI_RS01930 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS01930 IPR016162 Aldehyde dehydrogenase, N-terminal CLI_RS01930 IPR016163 Aldehyde dehydrogenase, C-terminal CLI_RS01930 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLI_RS01935 IPR016772 Uncharacterised conserved protein UCP020408 CLI_RS01940 IPR024523 Protein of unknown function DUF3793 CLI_RS01945 IPR021525 Protein of unknown function DUF3189 CLI_RS01950 IPR007132 Protein of unknown function DUF346 CLI_RS01955 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS01960 IPR002509 Polysaccharide deacetylase CLI_RS01960 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS01965 IPR001789 Signal transduction response regulator, receiver domain CLI_RS01965 IPR001867 Signal transduction response regulator, C-terminal CLI_RS01965 IPR011006 CheY-like superfamily CLI_RS01965 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS01970 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS01970 IPR003660 HAMP linker domain CLI_RS01970 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS01970 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS01970 IPR029151 Periplasmic sensor domain-like CLI_RS01980 IPR010719 Putative rRNA methylase CLI_RS01980 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS01985 IPR015414 SNARE associated Golgi protein CLI_RS01985 IPR032816 CLI_RS01985 CLI_RS01990 IPR000160 GGDEF domain CLI_RS01990 IPR001633 EAL domain CLI_RS01990 IPR003660 HAMP linker domain CLI_RS01990 IPR007892 CHASE4 CLI_RS01990 IPR029787 Nucleotide cyclase CLI_RS01995 IPR024301 Putative amidase domain CLI_RS02000 IPR002528 Multi antimicrobial extrusion protein CLI_RS02005 IPR003607 HD/PDEase domain CLI_RS02005 IPR006674 HD domain CLI_RS02010 IPR006153 Cation/H+ exchanger CLI_RS02015 IPR000192 Aminotransferase class V domain CLI_RS02015 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS02015 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS02015 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS02015 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CLI_RS02020 IPR018383 Uncharacterised protein family UPF0324, prokaryote CLI_RS02025 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS02025 IPR026841 CLI_RS02025 CLI_RS02030 IPR001789 Signal transduction response regulator, receiver domain CLI_RS02030 IPR001867 Signal transduction response regulator, C-terminal CLI_RS02030 IPR011006 CheY-like superfamily CLI_RS02030 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02030 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS02035 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS02035 IPR003660 HAMP linker domain CLI_RS02035 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS02035 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS02040 IPR001734 Sodium/solute symporter CLI_RS02045 IPR009051 Alpha-helical ferredoxin CLI_RS02045 IPR010208 Electron transport complex protein RnfC CLI_RS02045 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS02045 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02045 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02045 IPR019554 Soluble ligand binding domain CLI_RS02045 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS02050 IPR004338 NADH-quinone reductase NQR2/RnfD CLI_RS02050 IPR011303 Electron transport complex, RnfD CLI_RS02055 IPR007329 FMN-binding CLI_RS02055 IPR010209 Electron transport complex, RnfG CLI_RS02060 IPR003667 Electron transport complex, Rnf/Nqr CLI_RS02060 IPR010968 Electron transport complex, RnfE CLI_RS02065 IPR003667 Electron transport complex, Rnf/Nqr CLI_RS02065 IPR011293 Electron transport complex, RnfA CLI_RS02070 IPR007202 4Fe-4S domain CLI_RS02070 IPR009051 Alpha-helical ferredoxin CLI_RS02070 IPR010207 Electron transport complex, RnfB CLI_RS02070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02070 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02075 IPR007253 Putative cell wall binding repeat 2 CLI_RS02080 IPR010898 Heptaprenyl diphosphate synthase component I CLI_RS02080 IPR014535 Predicted heptaprenyl diphosphate synthase, component I CLI_RS02085 IPR024045 NusG, domain 2 CLI_RS02090 IPR003374 ApbE-like domain CLI_RS02090 IPR024932 Flavin transferase ApbE CLI_RS02095 IPR007253 Putative cell wall binding repeat 2 CLI_RS02100 IPR007253 Putative cell wall binding repeat 2 CLI_RS02110 IPR007253 Putative cell wall binding repeat 2 CLI_RS02110 IPR011081 Bacterial Ig-related CLI_RS02110 IPR026906 Leucine rich repeat 5 CLI_RS02110 IPR032675 CLI_RS02110 CLI_RS02120 IPR002931 Transglutaminase-like CLI_RS02120 IPR007253 Putative cell wall binding repeat 2 CLI_RS02125 IPR002656 Acyltransferase 3 CLI_RS02130 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS02130 IPR032485 CLI_RS02130 CLI_RS02130 IPR032812 CLI_RS02130 CLI_RS02135 IPR024370 PBP domain CLI_RS02140 IPR000515 MetI-like domain CLI_RS02140 IPR011864 Phosphate ABC transporter, permease protein PstC CLI_RS02145 IPR000515 MetI-like domain CLI_RS02145 IPR005672 Phosphate transport system permease protein PstA CLI_RS02150 IPR003439 ABC transporter-like CLI_RS02150 IPR003593 AAA+ ATPase domain CLI_RS02150 IPR017871 ABC transporter, conserved site CLI_RS02150 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02155 IPR023214 HAD-like domain CLI_RS02160 IPR002293 Amino acid/polyamine transporter I CLI_RS02165 IPR014247 Sporulation lipoprotein YhcN/YlaJ CLI_RS02165 IPR019076 Sporulation lipoprotein YhcN/YlaJ-like CLI_RS02170 IPR030910 CLI_RS02170 CLI_RS02175 IPR002725 Protein of unknown function DUF45 CLI_RS02180 IPR000424 Primosome PriB/single-strand DNA-binding CLI_RS02180 IPR011344 Single-stranded DNA-binding protein CLI_RS02180 IPR012340 Nucleic acid-binding, OB-fold CLI_RS02185 IPR003810 Domain of unknown function DUF204 CLI_RS02185 IPR022929 Putative manganese efflux pump MntP CLI_RS02190 IPR002481 Ferric-uptake regulator CLI_RS02190 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02200 IPR003607 HD/PDEase domain CLI_RS02200 IPR006674 HD domain CLI_RS02200 IPR006675 Uncharacterised domain HDIG CLI_RS02205 IPR002610 Peptidase S54, rhomboid CLI_RS02205 IPR022764 Peptidase S54, rhomboid domain CLI_RS02210 IPR003660 HAMP linker domain CLI_RS02210 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS02210 IPR029151 Periplasmic sensor domain-like CLI_RS02210 IPR033479 CLI_RS02210 CLI_RS02215 IPR000642 Peptidase M41 CLI_RS02215 IPR003593 AAA+ ATPase domain CLI_RS02215 IPR003959 ATPase, AAA-type, core CLI_RS02215 IPR003960 ATPase, AAA-type, conserved site CLI_RS02215 IPR005936 Peptidase, FtsH CLI_RS02215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02220 IPR010652 Protein of unknown function DUF1232 CLI_RS02225 IPR002156 Ribonuclease H domain CLI_RS02225 IPR012337 Ribonuclease H-like domain CLI_RS02225 IPR022892 Ribonuclease H CLI_RS02235 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS02235 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS02235 IPR011990 Tetratricopeptide-like helical domain CLI_RS02235 IPR019734 Tetratricopeptide repeat CLI_RS02240 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS02240 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS02240 IPR011990 Tetratricopeptide-like helical domain CLI_RS02240 IPR019734 Tetratricopeptide repeat CLI_RS02250 IPR002818 ThiJ/PfpI CLI_RS02250 IPR029062 Class I glutamine amidotransferase-like CLI_RS02255 IPR021328 Protein of unknown function DUF2935 CLI_RS02260 IPR001270 ClpA/B family CLI_RS02260 IPR003593 AAA+ ATPase domain CLI_RS02260 IPR003959 ATPase, AAA-type, core CLI_RS02260 IPR004176 Clp, N-terminal CLI_RS02260 IPR017730 Chaperonin ClpB CLI_RS02260 IPR018368 ClpA/B, conserved site 1 CLI_RS02260 IPR019489 Clp ATPase, C-terminal CLI_RS02260 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02260 IPR028299 ClpA/B, conserved site 2 CLI_RS02265 IPR011698 CobB/CobQ-like glutamine amidotransferase CLI_RS02265 IPR029062 Class I glutamine amidotransferase-like CLI_RS02270 IPR013221 Mur ligase, central CLI_RS02270 IPR013564 Domain of unknown function DUF1727 CLI_RS02270 IPR018109 Folylpolyglutamate synthetase, conserved site CLI_RS02275 IPR001250 Mannose-6-phosphate isomerase, type I CLI_RS02275 IPR011051 RmlC-like cupin domain CLI_RS02275 IPR014628 Mannose-6-phosphate isomerase, Firmicutes type, short form CLI_RS02275 IPR014710 RmlC-like jelly roll fold CLI_RS02285 IPR003824 Undecaprenyl-diphosphatase UppP CLI_RS02320 IPR001279 Beta-lactamase-like CLI_RS02325 IPR002123 Phospholipid/glycerol acyltransferase CLI_RS02325 IPR004552 1-acyl-sn-glycerol-3-phosphate acyltransferase CLI_RS02330 IPR000891 Pyruvate carboxyltransferase CLI_RS02330 IPR013785 Aldolase-type TIM barrel CLI_RS02335 IPR000573 Aconitase A/isopropylmalate dehydratase small subunit, swivel CLI_RS02335 IPR001030 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha CLI_RS02335 IPR006250 Aconitase, putative CLI_RS02335 IPR015928 Aconitase/3-isopropylmalate dehydratase, swivel CLI_RS02335 IPR015931 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 1/3 CLI_RS02335 IPR015932 Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha, subdomain 2 CLI_RS02335 IPR015937 Aconitase/isopropylmalate dehydratase CLI_RS02335 IPR018136 Aconitase family, 4Fe-4S cluster binding site CLI_RS02340 IPR001804 Isocitrate and isopropylmalate dehydrogenases family CLI_RS02340 IPR019818 Isocitrate/isopropylmalate dehydrogenase, conserved site CLI_RS02340 IPR024084 Isopropylmalate dehydrogenase-like domain CLI_RS02345 IPR003439 ABC transporter-like CLI_RS02345 IPR003593 AAA+ ATPase domain CLI_RS02345 IPR017871 ABC transporter, conserved site CLI_RS02345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02345 IPR030679 CLI_RS02345 CLI_RS02350 IPR018461 Na+/H+ antiporter, NhaC-like CLI_RS02355 IPR007211 Protein of unknown function DUF378 CLI_RS02360 IPR003190 Aspartate decarboxylase CLI_RS02360 IPR009010 Aspartate decarboxylase-like domain CLI_RS02365 IPR003721 Pantoate-beta-alanine ligase CLI_RS02365 IPR004821 Cytidyltransferase-like domain CLI_RS02365 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS02370 IPR003700 Ketopantoate hydroxymethyltransferase CLI_RS02370 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLI_RS02375 IPR014140 DNA helicase subunit AddB CLI_RS02375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02390 IPR011990 Tetratricopeptide-like helical domain CLI_RS02390 IPR019734 Tetratricopeptide repeat CLI_RS02400 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS02400 IPR009057 Homeodomain-like CLI_RS02400 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS02400 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLI_RS02405 IPR003495 CobW/HypB/UreG domain CLI_RS02405 IPR004392 Hydrogenase accessory protein HypB CLI_RS02405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02410 IPR009051 Alpha-helical ferredoxin CLI_RS02410 IPR016040 NAD(P)-binding domain CLI_RS02410 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS02410 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS02410 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS02410 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS02415 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF CLI_RS02430 IPR007379 Tim44-like domain CLI_RS02430 IPR032710 CLI_RS02430 CLI_RS02435 IPR000212 DNA helicase, UvrD/REP type CLI_RS02435 IPR011335 Restriction endonuclease type II-like CLI_RS02435 IPR011604 Exonuclease, phage-type/RecB, C-terminal CLI_RS02435 IPR014016 UvrD-like Helicase, ATP-binding domain CLI_RS02435 IPR014017 DNA helicase, UvrD-like, C-terminal CLI_RS02435 IPR014152 DNA helicase subunit AddA CLI_RS02435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02440 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS02440 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS02440 IPR029151 Periplasmic sensor domain-like CLI_RS02440 IPR033479 CLI_RS02440 CLI_RS02445 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLI_RS02445 IPR002933 Peptidase M20 CLI_RS02445 IPR010161 Peptidase M20B, tripeptide aminopeptidase CLI_RS02445 IPR011650 Peptidase M20, dimerisation domain CLI_RS02450 IPR002641 Patatin/Phospholipase A2-related CLI_RS02450 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLI_RS02455 IPR001279 Beta-lactamase-like CLI_RS02460 IPR025870 Glyoxalase-like domain CLI_RS02460 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS02470 IPR007253 Putative cell wall binding repeat 2 CLI_RS02470 IPR031841 CLI_RS02470 CLI_RS02475 IPR000515 MetI-like domain CLI_RS02475 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CLI_RS02480 IPR001320 Ionotropic glutamate receptor CLI_RS02480 IPR001638 Extracellular solute-binding protein, family 3 CLI_RS02480 IPR018313 Extracellular solute-binding protein, family 3, conserved site CLI_RS02485 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS02490 IPR001633 EAL domain CLI_RS02490 IPR013976 Metal-dependent hydrolase HDOD CLI_RS02490 IPR014408 Signal transduction c-di-GMP phosphodiesterase, EAL/HD-GYP domain-containing CLI_RS02495 IPR003733 Thiamine phosphate synthase CLI_RS02495 IPR013785 Aldolase-type TIM barrel CLI_RS02495 IPR022998 Thiamin phosphate synthase superfamily CLI_RS02500 IPR000417 Hydroxyethylthiazole kinase CLI_RS02500 IPR029056 Ribokinase-like CLI_RS02505 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CLI_RS02505 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLI_RS02505 IPR029056 Ribokinase-like CLI_RS02515 IPR000291 D-alanine--D-alanine ligase/VANA/B/C, conserved site CLI_RS02515 IPR005905 D-alanine--D-alanine ligase CLI_RS02515 IPR011095 D-alanine--D-alanine ligase, C-terminal CLI_RS02515 IPR011127 D-alanine--D-alanine ligase, N-terminal domain CLI_RS02515 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS02515 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS02515 IPR016185 Pre-ATP-grasp domain CLI_RS02520 IPR000709 Leu/Ile/Val-binding protein CLI_RS02520 IPR028081 Leucine-binding protein domain CLI_RS02520 IPR028082 Periplasmic binding protein-like I CLI_RS02525 IPR001851 ABC transporter, permease CLI_RS02530 IPR001851 ABC transporter, permease CLI_RS02535 IPR003439 ABC transporter-like CLI_RS02535 IPR003593 AAA+ ATPase domain CLI_RS02535 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02535 IPR032823 CLI_RS02535 CLI_RS02540 IPR003439 ABC transporter-like CLI_RS02540 IPR003593 AAA+ ATPase domain CLI_RS02540 IPR017871 ABC transporter, conserved site CLI_RS02540 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02545 IPR003748 Protein of unknown function DUF169 CLI_RS02550 IPR010619 Domain of unknown function DUF1212 CLI_RS02555 IPR024528 Domain of unknown function DUF3815 CLI_RS02560 IPR000524 Transcription regulator HTH, GntR CLI_RS02560 IPR004839 Aminotransferase, class I/classII CLI_RS02560 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02560 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS02560 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS02560 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS02565 IPR007156 LemA CLI_RS02565 IPR023353 LemA-like domain CLI_RS02570 IPR007621 TPM domain CLI_RS02575 IPR000086 NUDIX hydrolase domain CLI_RS02575 IPR015797 NUDIX hydrolase domain-like CLI_RS02575 IPR020084 NUDIX hydrolase, conserved site CLI_RS02575 IPR020476 NUDIX hydrolase CLI_RS02585 IPR024529 ECF transporter, substrate-specific component CLI_RS02590 IPR025714 Methyltransferase domain CLI_RS02590 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS02595 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS02595 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS02600 IPR021354 Protein of unknown function DUF2975 CLI_RS02605 IPR004593 Nuclease SbcCD subunit D CLI_RS02605 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLI_RS02605 IPR026843 Nuclease SbcCD subunit D, C-terminal domain CLI_RS02605 IPR029052 Metallo-dependent phosphatase-like CLI_RS02610 IPR027050 Nuclease SbcCD subunit C CLI_RS02610 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02615 IPR000086 NUDIX hydrolase domain CLI_RS02615 IPR015797 NUDIX hydrolase domain-like CLI_RS02620 IPR003740 Membrane Protein of unknown function DUF161 CLI_RS02620 IPR019264 Domain of unknown function DUF2179 CLI_RS02625 IPR001845 HTH ArsR-type DNA-binding domain CLI_RS02625 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02625 IPR018334 ArsR-type transcription regulator, HTH motif CLI_RS02630 IPR001757 Cation-transporting P-type ATPase CLI_RS02630 IPR006121 Heavy metal-associated domain, HMA CLI_RS02630 IPR008250 P-type ATPase, A domain CLI_RS02630 IPR018303 P-type ATPase, phosphorylation site CLI_RS02630 IPR023214 HAD-like domain CLI_RS02630 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS02630 IPR027256 Cation-transporting P-type ATPase, subfamily IB CLI_RS02640 IPR002716 PIN domain CLI_RS02640 IPR003714 PhoH-like protein CLI_RS02640 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02640 IPR029060 PIN domain-like CLI_RS02645 IPR018711 Domain of unknown function DUF2233 CLI_RS02650 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS02655 IPR019891 Bacteriocin, streptolysin S, precursor CLI_RS02660 IPR000415 Nitroreductase-like CLI_RS02660 IPR020051 SagB-type dehydrogenase domain CLI_RS02660 IPR029479 Nitroreductase CLI_RS02665 IPR000594 UBA/THIF-type NAD/FAD binding fold CLI_RS02665 IPR016040 NAD(P)-binding domain CLI_RS02665 IPR019892 Thiazole/oxazole-forming peptide maturase, SagC family component CLI_RS02670 IPR003776 YcaO-like domain CLI_RS02670 IPR027624 Thiazole/oxazole-forming peptide maturase, SagD family component CLI_RS02675 IPR003675 CAAX amino terminal protease CLI_RS02685 IPR003439 ABC transporter-like CLI_RS02685 IPR003593 AAA+ ATPase domain CLI_RS02685 IPR017871 ABC transporter, conserved site CLI_RS02685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02700 IPR008915 Peptidase M50 CLI_RS02710 IPR000802 Arsenical pump membrane protein, ArsB CLI_RS02710 IPR004680 Citrate transporter-like domain CLI_RS02720 IPR003358 tRNA (guanine-N-7) methyltransferase CLI_RS02720 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS02725 IPR024997 Protein of unknown function DUF3892 CLI_RS02730 IPR000866 Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant CLI_RS02730 IPR002065 Putative thiol peroxidase Tpx CLI_RS02730 IPR012336 Thioredoxin-like fold CLI_RS02730 IPR018219 Thiol peroxidase conserved site CLI_RS02735 IPR002347 Glucose/ribitol dehydrogenase CLI_RS02735 IPR016040 NAD(P)-binding domain CLI_RS02735 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLI_RS02740 IPR001789 Signal transduction response regulator, receiver domain CLI_RS02740 IPR011006 CheY-like superfamily CLI_RS02745 IPR000064 Endopeptidase, NLPC/P60 domain CLI_RS02745 IPR003646 SH3-like domain, bacterial-type CLI_RS02745 IPR007921 CHAP domain CLI_RS02750 IPR022742 Putative lysophospholipase CLI_RS02750 IPR029058 Alpha/Beta hydrolase fold CLI_RS02755 IPR001789 Signal transduction response regulator, receiver domain CLI_RS02755 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLI_RS02755 IPR011006 CheY-like superfamily CLI_RS02755 IPR013656 PAS fold-4 CLI_RS02760 IPR003607 HD/PDEase domain CLI_RS02760 IPR006674 HD domain CLI_RS02760 IPR006675 Uncharacterised domain HDIG CLI_RS02765 IPR003660 HAMP linker domain CLI_RS02765 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS02765 IPR029151 Periplasmic sensor domain-like CLI_RS02765 IPR033479 CLI_RS02765 CLI_RS02770 IPR001789 Signal transduction response regulator, receiver domain CLI_RS02770 IPR011006 CheY-like superfamily CLI_RS02770 IPR018745 Domain of unknown function DUF2294 CLI_RS02775 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLI_RS02775 IPR002317 Serine-tRNA ligase, type1 CLI_RS02775 IPR010978 tRNA-binding arm CLI_RS02775 IPR015866 Serine-tRNA synthetase, type1, N-terminal CLI_RS02780 IPR006554 Helicase-like, DEXD box c2 type CLI_RS02780 IPR006555 ATP-dependent helicase, C-terminal CLI_RS02780 IPR010614 DEAD2 CLI_RS02780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02785 IPR009078 Ferritin-like superfamily CLI_RS02785 IPR012347 Ferritin-related CLI_RS02790 IPR000524 Transcription regulator HTH, GntR CLI_RS02790 IPR006037 Regulator of K+ conductance, C-terminal CLI_RS02790 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02795 IPR007698 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, NAD(H)-binding domain CLI_RS02795 IPR007886 Alanine dehydrogenase/pyridine nucleotide transhydrogenase, N-terminal CLI_RS02795 IPR016040 NAD(P)-binding domain CLI_RS02800 IPR009164 Fructose-1,6-bisphosphatase class 3 CLI_RS02800 IPR029052 Metallo-dependent phosphatase-like CLI_RS02810 IPR012312 Haemerythrin/HHE cation-binding motif CLI_RS02810 IPR012827 Haemerythrin-like, metal-binding domain CLI_RS02810 IPR016131 Haemerythrin, iron-binding site CLI_RS02825 IPR001189 Manganese/iron superoxide dismutase CLI_RS02825 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLI_RS02825 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLI_RS02830 IPR001279 Beta-lactamase-like CLI_RS02840 IPR002293 Amino acid/polyamine transporter I CLI_RS02850 IPR000485 AsnC-type HTH domain CLI_RS02850 IPR011008 Dimeric alpha-beta barrel CLI_RS02850 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS02850 IPR019887 Transcription regulator AsnC-type, C-terminal CLI_RS02850 IPR019888 Transcription regulator AsnC-type CLI_RS02860 IPR002293 Amino acid/polyamine transporter I CLI_RS02865 IPR002293 Amino acid/polyamine transporter I CLI_RS02870 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS02870 IPR011004 Trimeric LpxA-like CLI_RS02875 IPR001279 Beta-lactamase-like CLI_RS02880 IPR001757 Cation-transporting P-type ATPase CLI_RS02880 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS02880 IPR005782 Calcium-transporting P-type ATPase, subfamily IIA, SERCA-type CLI_RS02880 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS02880 IPR006408 Calcium-transporting P-type ATPase, subfamily IIB CLI_RS02880 IPR008250 P-type ATPase, A domain CLI_RS02880 IPR018303 P-type ATPase, phosphorylation site CLI_RS02880 IPR023214 HAD-like domain CLI_RS02880 IPR023298 P-type ATPase, transmembrane domain CLI_RS02880 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS02885 IPR003370 Chromate transporter CLI_RS02890 IPR003370 Chromate transporter CLI_RS02895 IPR003477 mRNA interferase PemK-like protein CLI_RS02895 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLI_RS02900 IPR005585 Protein of unknown function DUF327 CLI_RS02900 IPR024042 Hypothetical protein TM1646-like domain CLI_RS02905 IPR003010 Carbon-nitrogen hydrolase CLI_RS02905 IPR003694 NAD(+) synthetase CLI_RS02905 IPR014445 Glutamine-dependent NAD(+) synthetase CLI_RS02905 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS02905 IPR022310 NAD/GMP synthase CLI_RS02910 IPR002810 NfeD-like, C-terminal domain CLI_RS02910 IPR012340 Nucleic acid-binding, OB-fold CLI_RS02915 IPR001107 Band 7 protein CLI_RS02915 IPR001972 Stomatin family CLI_RS02925 IPR000994 Peptidase M24, structural domain CLI_RS02925 IPR007865 Aminopeptidase P, N-terminal CLI_RS02925 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS02925 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS02935 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS02935 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS02945 IPR000182 GNAT domain CLI_RS02945 IPR016181 Acyl-CoA N-acyltransferase CLI_RS02950 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS02965 IPR000383 Xaa-Pro dipeptidyl-peptidase-like domain CLI_RS02965 IPR029058 Alpha/Beta hydrolase fold CLI_RS02975 IPR003706 Carbon starvation protein CstA CLI_RS02975 IPR025299 CstA C-terminal domain CLI_RS02980 IPR024425 Domain of unknown function DUF2154 CLI_RS02985 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS02985 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS02985 IPR029151 Periplasmic sensor domain-like CLI_RS02985 IPR033479 CLI_RS02985 CLI_RS02990 IPR003439 ABC transporter-like CLI_RS02990 IPR003593 AAA+ ATPase domain CLI_RS02990 IPR017871 ABC transporter, conserved site CLI_RS02990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS02995 IPR001185 Large-conductance mechanosensitive channel CLI_RS03000 IPR012651 Thiamine transporter ThiT/YuaJ CLI_RS03010 IPR004027 SEC-C motif CLI_RS03010 IPR032710 CLI_RS03010 CLI_RS03015 IPR000524 Transcription regulator HTH, GntR CLI_RS03015 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03020 IPR003439 ABC transporter-like CLI_RS03020 IPR003593 AAA+ ATPase domain CLI_RS03020 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03030 IPR003439 ABC transporter-like CLI_RS03030 IPR003593 AAA+ ATPase domain CLI_RS03030 IPR005893 Spermidine/putrescine ABC transporter, ATP-binding subunit CLI_RS03030 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS03030 IPR013611 Transport-associated OB, type 2 CLI_RS03030 IPR017871 ABC transporter, conserved site CLI_RS03030 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03035 IPR000515 MetI-like domain CLI_RS03040 IPR000515 MetI-like domain CLI_RS03040 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CLI_RS03045 IPR003313 AraC-type arabinose-binding/dimerisation domain CLI_RS03045 IPR009057 Homeodomain-like CLI_RS03045 IPR011051 RmlC-like cupin domain CLI_RS03045 IPR014710 RmlC-like jelly roll fold CLI_RS03045 IPR018060 DNA binding HTH domain, AraC-type CLI_RS03045 IPR020449 Transcription regulator HTH, AraC- type CLI_RS03050 IPR001991 Sodium:dicarboxylate symporter CLI_RS03055 IPR010603 Zinc finger, ClpX C4-type CLI_RS03055 IPR018649 Domain of unknown function DUF2078 CLI_RS03060 IPR000182 GNAT domain CLI_RS03060 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03065 IPR003675 CAAX amino terminal protease CLI_RS03070 IPR001646 Pentapeptide repeat CLI_RS03075 IPR002547 tRNA-binding domain CLI_RS03075 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03085 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS03085 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS03095 IPR000223 Peptidase S26A, signal peptidase I CLI_RS03095 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS03095 IPR019533 Peptidase S26 CLI_RS03095 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CLI_RS03095 IPR019758 Peptidase S26A, signal peptidase I, conserved site CLI_RS03095 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS03105 IPR001789 Signal transduction response regulator, receiver domain CLI_RS03105 IPR007492 LytTR DNA-binding domain CLI_RS03105 IPR011006 CheY-like superfamily CLI_RS03110 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS03115 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS03120 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS03125 IPR027601 Cys-rich peptide, Clo7bot family CLI_RS03130 IPR007197 Radical SAM CLI_RS03130 IPR013785 Aldolase-type TIM barrel CLI_RS03130 IPR023885 4Fe4S-binding SPASM domain CLI_RS03130 IPR027622 Radical SAM/SPASM domain-containing Clo7bot peptide maturase CLI_RS03140 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03145 IPR003439 ABC transporter-like CLI_RS03145 IPR003593 AAA+ ATPase domain CLI_RS03145 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS03145 IPR017871 ABC transporter, conserved site CLI_RS03145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03155 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03160 IPR003838 Permease FtsX-like CLI_RS03165 IPR003439 ABC transporter-like CLI_RS03165 IPR003593 AAA+ ATPase domain CLI_RS03165 IPR017871 ABC transporter, conserved site CLI_RS03165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03170 IPR000182 GNAT domain CLI_RS03170 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03185 IPR003797 DegV CLI_RS03190 IPR019264 Domain of unknown function DUF2179 CLI_RS03190 IPR022930 Protein of unknown function UPF0316 CLI_RS03200 IPR000917 Sulfatase CLI_RS03200 IPR012160 Membrane sulfatase, HI1246-related CLI_RS03200 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLI_RS03200 IPR017850 Alkaline-phosphatase-like, core domain CLI_RS03205 IPR000014 PAS domain CLI_RS03205 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS03205 IPR002197 DNA binding HTH domain, Fis-type CLI_RS03205 IPR003593 AAA+ ATPase domain CLI_RS03205 IPR009057 Homeodomain-like CLI_RS03205 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS03205 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS03205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03210 IPR002668 Concentrative nucleoside transporter N-terminal domain CLI_RS03210 IPR008276 Concentrative nucleoside transporter CLI_RS03210 IPR011642 Nucleoside recognition Gate CLI_RS03210 IPR011657 Concentrative nucleoside transporter C-terminal domain CLI_RS03210 IPR018270 Concentrative nucleoside transporter, metazoan/bacterial CLI_RS03215 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLI_RS03215 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLI_RS03215 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLI_RS03215 IPR004522 Asparagine-tRNA ligase CLI_RS03215 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03215 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like CLI_RS03220 IPR005149 Transcription regulator PadR N-terminal CLI_RS03220 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03225 IPR021359 Protein of unknown function DUF2812 CLI_RS03230 IPR007492 LytTR DNA-binding domain CLI_RS03240 IPR009057 Homeodomain-like CLI_RS03240 IPR010499 Bacterial transcription activator, effector binding CLI_RS03240 IPR011256 Regulatory factor, effector binding domain CLI_RS03240 IPR018060 DNA binding HTH domain, AraC-type CLI_RS03240 IPR018062 HTH domain AraC-type, conserved site CLI_RS03240 IPR020449 Transcription regulator HTH, AraC- type CLI_RS03240 IPR029441 Integron-associated effector binding protein CLI_RS03245 IPR003675 CAAX amino terminal protease CLI_RS03250 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS03250 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS03255 IPR011081 Bacterial Ig-related CLI_RS03255 IPR011990 Tetratricopeptide-like helical domain CLI_RS03260 IPR011081 Bacterial Ig-related CLI_RS03260 IPR011990 Tetratricopeptide-like helical domain CLI_RS03265 IPR001789 Signal transduction response regulator, receiver domain CLI_RS03265 IPR001867 Signal transduction response regulator, C-terminal CLI_RS03265 IPR011006 CheY-like superfamily CLI_RS03265 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03265 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS03270 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03270 IPR003660 HAMP linker domain CLI_RS03270 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS03275 IPR003709 Peptidase M15B/M15C CLI_RS03275 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLI_RS03280 IPR001789 Signal transduction response regulator, receiver domain CLI_RS03280 IPR001867 Signal transduction response regulator, C-terminal CLI_RS03280 IPR011006 CheY-like superfamily CLI_RS03280 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03285 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03285 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS03285 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS03290 IPR003352 Phosphotransferase system, EIIC CLI_RS03295 IPR001789 Signal transduction response regulator, receiver domain CLI_RS03295 IPR011006 CheY-like superfamily CLI_RS03295 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03295 IPR013972 YcbB domain CLI_RS03300 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03300 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS03305 IPR001182 Cell cycle protein FtsW/RodA CLI_RS03305 IPR011923 Rod shape-determining protein RodA CLI_RS03305 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CLI_RS03310 IPR003333 Mycolic acid cyclopropane synthase CLI_RS03310 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS03315 IPR001845 HTH ArsR-type DNA-binding domain CLI_RS03315 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03320 IPR003439 ABC transporter-like CLI_RS03320 IPR003593 AAA+ ATPase domain CLI_RS03320 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS03320 IPR017871 ABC transporter, conserved site CLI_RS03320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03325 IPR001707 Chloramphenicol acetyltransferase CLI_RS03325 IPR023213 Chloramphenicol acetyltransferase-like domain CLI_RS03330 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS03330 IPR009057 Homeodomain-like CLI_RS03330 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS03330 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS03335 IPR000182 GNAT domain CLI_RS03335 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03340 IPR002547 tRNA-binding domain CLI_RS03340 IPR008231 Export-related chaperone protein CsaA CLI_RS03340 IPR012340 Nucleic acid-binding, OB-fold CLI_RS03345 IPR003313 AraC-type arabinose-binding/dimerisation domain CLI_RS03345 IPR009057 Homeodomain-like CLI_RS03345 IPR014710 RmlC-like jelly roll fold CLI_RS03345 IPR018060 DNA binding HTH domain, AraC-type CLI_RS03345 IPR018062 HTH domain AraC-type, conserved site CLI_RS03350 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS03350 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS03350 IPR011051 RmlC-like cupin domain CLI_RS03350 IPR013096 Cupin 2, conserved barrel CLI_RS03350 IPR014710 RmlC-like jelly roll fold CLI_RS03355 IPR006674 HD domain CLI_RS03360 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03365 IPR003439 ABC transporter-like CLI_RS03365 IPR003593 AAA+ ATPase domain CLI_RS03365 IPR017871 ABC transporter, conserved site CLI_RS03365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03375 IPR002933 Peptidase M20 CLI_RS03375 IPR010158 Amidase, hydantoinase/carbamoylase CLI_RS03375 IPR011650 Peptidase M20, dimerisation domain CLI_RS03380 IPR000432 DNA mismatch repair protein MutS, C-terminal CLI_RS03380 IPR005747 Endonuclease MutS2 CLI_RS03380 IPR007696 DNA mismatch repair protein MutS, core CLI_RS03380 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03385 IPR011990 Tetratricopeptide-like helical domain CLI_RS03390 IPR026989 Transposon-encoded protein TnpV CLI_RS03395 IPR012349 FMN-binding split barrel CLI_RS03395 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLI_RS03400 IPR007401 Protein of unknown function DUF454 CLI_RS03405 IPR027890 Protein of unknown function DUF4491 CLI_RS03410 IPR012349 FMN-binding split barrel CLI_RS03410 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLI_RS03415 IPR003265 HhH-GPD domain CLI_RS03415 IPR011257 DNA glycosylase CLI_RS03420 IPR000524 Transcription regulator HTH, GntR CLI_RS03420 IPR004839 Aminotransferase, class I/classII CLI_RS03420 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03420 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS03420 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03430 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLI_RS03430 IPR001650 Helicase, C-terminal CLI_RS03430 IPR011545 DEAD/DEAH box helicase domain CLI_RS03430 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS03430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03435 IPR003251 Rubrerythrin CLI_RS03435 IPR009078 Ferritin-like superfamily CLI_RS03435 IPR012347 Ferritin-related CLI_RS03440 IPR000835 MarR-type HTH domain CLI_RS03440 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03445 IPR004638 Drug resistance transporter EmrB/QacA subfamily CLI_RS03445 IPR011701 Major facilitator superfamily CLI_RS03445 IPR020846 Major facilitator superfamily domain CLI_RS03450 IPR015943 WD40/YVTN repeat-like-containing domain CLI_RS03450 IPR019405 Lactonase, 7-bladed beta propeller CLI_RS03455 IPR003439 ABC transporter-like CLI_RS03455 IPR003593 AAA+ ATPase domain CLI_RS03455 IPR017871 ABC transporter, conserved site CLI_RS03455 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03475 IPR002847 Coenzyme F420:L-glutamate ligase-like domain CLI_RS03480 IPR000847 Transcription regulator HTH, LysR CLI_RS03480 IPR005119 LysR, substrate-binding CLI_RS03480 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03490 IPR004341 CAT RNA-binding domain CLI_RS03490 IPR011608 PRD domain CLI_RS03495 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS03495 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS03495 IPR003352 Phosphotransferase system, EIIC CLI_RS03495 IPR011055 Duplicated hybrid motif CLI_RS03495 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CLI_RS03495 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS03500 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLI_RS03500 IPR004013 PHP, C-terminal CLI_RS03500 IPR013757 Type IIA DNA topoisomerase subunit A, alpha-helical domain CLI_RS03500 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS03505 IPR000595 Cyclic nucleotide-binding domain CLI_RS03505 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03505 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS03505 IPR014710 RmlC-like jelly roll fold CLI_RS03505 IPR018490 Cyclic nucleotide-binding-like CLI_RS03510 IPR001279 Beta-lactamase-like CLI_RS03510 IPR008254 Flavodoxin/nitric oxide synthase CLI_RS03510 IPR016440 Rubredoxin-oxygen oxidoreductase CLI_RS03510 IPR029039 Flavoprotein-like CLI_RS03515 IPR012312 Haemerythrin/HHE cation-binding motif CLI_RS03515 IPR019903 Repair of iron centres family CLI_RS03520 IPR007380 Domain of unknown function DUF438 CLI_RS03520 IPR012312 Haemerythrin/HHE cation-binding motif CLI_RS03525 IPR005019 Methyladenine glycosylase CLI_RS03525 IPR011257 DNA glycosylase CLI_RS03535 IPR011992 EF-hand domain pair CLI_RS03545 IPR001279 Beta-lactamase-like CLI_RS03550 IPR001851 ABC transporter, permease CLI_RS03555 IPR003439 ABC transporter-like CLI_RS03555 IPR003593 AAA+ ATPase domain CLI_RS03555 IPR017871 ABC transporter, conserved site CLI_RS03555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03560 IPR007487 ABC transporter, substrate-binding protein CLI_RS03560 IPR028082 Periplasmic binding protein-like I CLI_RS03565 IPR005650 BlaI transcriptional regulatory family CLI_RS03565 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03585 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS03585 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS03585 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS03585 IPR014284 RNA polymerase sigma-70 like domain CLI_RS03590 IPR001269 tRNA-dihydrouridine synthase CLI_RS03590 IPR013785 Aldolase-type TIM barrel CLI_RS03590 IPR018517 tRNA-dihydrouridine synthase, conserved site CLI_RS03595 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLI_RS03595 IPR006359 Transcription elongation factor GreA CLI_RS03595 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLI_RS03595 IPR023459 Transcription elongation factor GreA/GreB family CLI_RS03595 IPR028624 Transcription elongation factor GreA/GreB CLI_RS03605 IPR009057 Homeodomain-like CLI_RS03605 IPR018060 DNA binding HTH domain, AraC-type CLI_RS03605 IPR020449 Transcription regulator HTH, AraC- type CLI_RS03610 IPR002491 ABC transporter periplasmic binding domain CLI_RS03615 IPR000522 ABC transporter, permease protein CLI_RS03615 IPR029022 ABC transporter, BtuC-like CLI_RS03620 IPR000522 ABC transporter, permease protein CLI_RS03620 IPR029022 ABC transporter, BtuC-like CLI_RS03625 IPR003439 ABC transporter-like CLI_RS03625 IPR003593 AAA+ ATPase domain CLI_RS03625 IPR017871 ABC transporter, conserved site CLI_RS03625 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03630 IPR000392 Nitrogenase iron protein, subunit NifH/Protochlorophyllide reductase, subunit ChlL CLI_RS03630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03630 IPR030655 CLI_RS03630 CLI_RS03635 IPR000510 Nitrogenase/oxidoreductase, component 1 CLI_RS03640 IPR000510 Nitrogenase/oxidoreductase, component 1 CLI_RS03645 IPR003660 HAMP linker domain CLI_RS03645 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS03645 IPR029151 Periplasmic sensor domain-like CLI_RS03645 IPR033479 CLI_RS03645 CLI_RS03655 IPR025466 Protein of unknown function DUF4317 CLI_RS03660 IPR006222 Glycine cleavage T-protein, N-terminal CLI_RS03660 IPR006223 Glycine cleavage system T protein CLI_RS03660 IPR013977 Glycine cleavage T-protein, C-terminal barrel domain CLI_RS03660 IPR022903 Glycine cleavage system T protein, bacteria CLI_RS03660 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLI_RS03660 IPR028896 Aminomethyltransferase/Dimethylsulfonioproprionate demethylase DmdA CLI_RS03660 IPR029043 Glycine cleavage T-protein/YgfZ, C-terminal domain CLI_RS03665 IPR002930 Glycine cleavage system H-protein CLI_RS03665 IPR003016 2-oxo acid dehydrogenase, lipoyl-binding site CLI_RS03665 IPR011053 Single hybrid motif CLI_RS03665 IPR017453 Glycine cleavage system H-protein, subgroup CLI_RS03670 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS03670 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03670 IPR020580 Glycine cleavage system P-protein, N-terminal CLI_RS03670 IPR020581 Glycine cleavage system P protein CLI_RS03670 IPR023010 Probable glycine dehydrogenase (decarboxylating) subunit 1 CLI_RS03675 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS03675 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03675 IPR020580 Glycine cleavage system P-protein, N-terminal CLI_RS03675 IPR020581 Glycine cleavage system P protein CLI_RS03675 IPR023012 Glycine cleavage system P protein, subunit 2, putative CLI_RS03680 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLI_RS03680 IPR006258 Dihydrolipoamide dehydrogenase CLI_RS03680 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLI_RS03680 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLI_RS03680 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS03685 IPR004143 Biotin/lipoate A/B protein ligase CLI_RS03685 IPR004562 Lipoyltransferase/lipoate-protein ligase CLI_RS03685 IPR019491 Lipoate protein ligase, C-terminal CLI_RS03690 IPR010995 DNA repair Rad51/transcription factor NusA, alpha-helical CLI_RS03690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03705 IPR007560 Restriction endonuclease type IV, Mrr CLI_RS03705 IPR011335 Restriction endonuclease type II-like CLI_RS03705 IPR011856 tRNA endonuclease-like domain CLI_RS03710 IPR000182 GNAT domain CLI_RS03710 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03715 IPR009057 Homeodomain-like CLI_RS03715 IPR018060 DNA binding HTH domain, AraC-type CLI_RS03715 IPR018062 HTH domain AraC-type, conserved site CLI_RS03715 IPR020449 Transcription regulator HTH, AraC- type CLI_RS03720 IPR010499 Bacterial transcription activator, effector binding CLI_RS03720 IPR011256 Regulatory factor, effector binding domain CLI_RS03720 IPR029442 GyrI-like small molecule binding domain CLI_RS03725 IPR009057 Homeodomain-like CLI_RS03730 IPR000182 GNAT domain CLI_RS03730 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03740 IPR001789 Signal transduction response regulator, receiver domain CLI_RS03740 IPR001867 Signal transduction response regulator, C-terminal CLI_RS03740 IPR011006 CheY-like superfamily CLI_RS03740 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03740 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS03745 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS03745 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS03745 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS03750 IPR003439 ABC transporter-like CLI_RS03750 IPR003593 AAA+ ATPase domain CLI_RS03750 IPR017871 ABC transporter, conserved site CLI_RS03750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03755 IPR003838 Permease FtsX-like CLI_RS03760 IPR000835 MarR-type HTH domain CLI_RS03760 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03760 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS03765 IPR005025 NADPH-dependent FMN reductase-like CLI_RS03765 IPR029039 Flavoprotein-like CLI_RS03775 IPR000551 MerR-type HTH domain CLI_RS03775 IPR009061 DNA binding domain, putative CLI_RS03785 IPR010095 Transposase IS605, OrfB, C-terminal CLI_RS03790 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS03795 IPR010354 Oleate hydratase CLI_RS03795 IPR016040 NAD(P)-binding domain CLI_RS03795 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS03800 IPR003439 ABC transporter-like CLI_RS03800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03810 IPR005025 NADPH-dependent FMN reductase-like CLI_RS03810 IPR029039 Flavoprotein-like CLI_RS03815 IPR023210 NADP-dependent oxidoreductase domain CLI_RS03820 IPR003439 ABC transporter-like CLI_RS03820 IPR003593 AAA+ ATPase domain CLI_RS03820 IPR017871 ABC transporter, conserved site CLI_RS03820 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03825 IPR000412 ABC-2 transporter CLI_RS03825 IPR013525 ABC-2 type transporter CLI_RS03830 IPR000620 Drug/metabolite transporter CLI_RS03835 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS03835 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS03835 IPR011051 RmlC-like cupin domain CLI_RS03835 IPR013096 Cupin 2, conserved barrel CLI_RS03835 IPR014710 RmlC-like jelly roll fold CLI_RS03845 IPR000182 GNAT domain CLI_RS03845 IPR016181 Acyl-CoA N-acyltransferase CLI_RS03850 IPR009057 Homeodomain-like CLI_RS03850 IPR018060 DNA binding HTH domain, AraC-type CLI_RS03850 IPR020449 Transcription regulator HTH, AraC- type CLI_RS03855 IPR007077 TfoX, C-terminal CLI_RS03860 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLI_RS03860 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLI_RS03860 IPR016039 Thiolase-like CLI_RS03865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS03865 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS03870 IPR009057 Homeodomain-like CLI_RS03870 IPR014875 Mor transcription activator CLI_RS03880 IPR003439 ABC transporter-like CLI_RS03880 IPR003593 AAA+ ATPase domain CLI_RS03880 IPR017871 ABC transporter, conserved site CLI_RS03880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS03880 IPR032781 CLI_RS03880 CLI_RS03885 IPR001034 HTH DeoR N-terminal domain CLI_RS03885 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03885 IPR013196 Helix-turn-helix, type 11 CLI_RS03885 IPR026881 WYL domain CLI_RS03885 IPR028349 Protein PafB/PafC CLI_RS03890 IPR002818 ThiJ/PfpI CLI_RS03890 IPR029062 Class I glutamine amidotransferase-like CLI_RS03900 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLI_RS03900 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS03900 IPR005856 Cysteine synthase K/M CLI_RS03900 IPR005859 Cysteine synthase A CLI_RS03905 IPR003815 S-ribosylhomocysteinase (LuxS) CLI_RS03905 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLI_RS03910 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLI_RS03910 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS03910 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS03910 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS03915 IPR013216 Methyltransferase type 11 CLI_RS03915 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS03925 IPR001223 Glycoside hydrolase, family 18, catalytic domain CLI_RS03925 IPR001579 Glycoside hydrolase, chitinase active site CLI_RS03925 IPR008965 Carbohydrate-binding domain CLI_RS03925 IPR009470 Chitinase, C-terminal CLI_RS03925 IPR011583 Chitinase II CLI_RS03925 IPR012291 Cellulose-binding family II/chitobiase, carbohydrate-binding domain CLI_RS03925 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS03925 IPR017853 Glycoside hydrolase, superfamily CLI_RS03925 IPR029070 Chitinase insertion domain CLI_RS03930 IPR001014 Ribosomal protein L23/L25, conserved site CLI_RS03930 IPR001802 Mercuric transport protein periplasmic component/copper chaperone CopZ CLI_RS03930 IPR006121 Heavy metal-associated domain, HMA CLI_RS03940 IPR009327 Protein of unknown function DUF985 CLI_RS03940 IPR011051 RmlC-like cupin domain CLI_RS03940 IPR014710 RmlC-like jelly roll fold CLI_RS03950 IPR010359 Protein of unknown function DUF955 CLI_RS03955 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS03955 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS03960 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS03960 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS03965 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS03970 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS03970 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS03970 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS03970 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS03970 IPR014284 RNA polymerase sigma-70 like domain CLI_RS03975 IPR024419 Protein of unknown function YvrJ CLI_RS03980 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLI_RS03980 IPR029052 Metallo-dependent phosphatase-like CLI_RS03985 IPR012454 Protein of unknown function DUF1659 CLI_RS03990 IPR021321 Protein of unknown function DUF2922 CLI_RS03995 IPR011094 Uncharacterised protein family, LppY/LpqO CLI_RS03995 IPR018392 LysM domain CLI_RS04000 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS04005 IPR001845 HTH ArsR-type DNA-binding domain CLI_RS04005 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04005 IPR018334 ArsR-type transcription regulator, HTH motif CLI_RS04010 IPR010712 Arsenical-resistance operon trans-acting repressor ArsD CLI_RS04015 IPR016300 Arsenical pump ATPase, ArsA/GET3 CLI_RS04015 IPR025723 Anion-transporting ATPase-like domain CLI_RS04015 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04015 IPR027541 Arsenical pump-driving ATPase CLI_RS04020 IPR002657 Bile acid:sodium symporter CLI_RS04020 IPR004706 Arsenical-resistance protein ACR3 CLI_RS04025 IPR025234 Protein of unknown function DUF4177 CLI_RS04030 IPR010181 CGCAxxGCC motif CLI_RS04030 IPR011031 Multihaem cytochrome CLI_RS04035 IPR001845 HTH ArsR-type DNA-binding domain CLI_RS04035 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04035 IPR018334 ArsR-type transcription regulator, HTH motif CLI_RS04045 IPR029033 Histidine phosphatase superfamily CLI_RS04050 IPR023485 Phosphotyrosine protein phosphatase I superfamily CLI_RS04055 IPR010567 Clostridium P47 protein CLI_RS04060 IPR010567 Clostridium P47 protein CLI_RS04070 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04070 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS04070 IPR014284 RNA polymerase sigma-70 like domain CLI_RS04070 IPR017622 Transcription regulator, P21/BotR , Clostridium toxin-associated CLI_RS04075 IPR010567 Clostridium P47 protein CLI_RS04080 IPR000395 Clostridial neurotoxin zinc protease CLI_RS04080 IPR012928 Clostridium neurotoxin, receptor binding N-terminal CLI_RS04080 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLI_RS04080 IPR013677 Nontoxic nonhaemagglutinin C-terminal CLI_RS04085 IPR000395 Clostridial neurotoxin zinc protease CLI_RS04085 IPR011065 Kunitz inhibitor ST1-like CLI_RS04085 IPR012500 Clostridium neurotoxin, translocation CLI_RS04085 IPR012928 Clostridium neurotoxin, receptor binding N-terminal CLI_RS04085 IPR013104 Clostridium neurotoxin, receptor-binding C-terminal CLI_RS04085 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLI_RS04090 IPR002053 Glycoside hydrolase, family 25 CLI_RS04090 IPR002477 Peptidoglycan binding-like CLI_RS04090 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS04090 IPR017853 Glycoside hydrolase, superfamily CLI_RS04090 IPR018077 Glycoside hydrolase, family 25 subgroup CLI_RS04095 IPR007710 Nucleoside 2-deoxyribosyltransferase CLI_RS04100 IPR023451 Thymidylate synthase/dCMP hydroxymethylase domain CLI_RS04105 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS04110 IPR006059 Bacterial extracellular solute-binding, family 1 CLI_RS04110 IPR030901 CLI_RS04110 CLI_RS04115 IPR004399 Hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase CLI_RS04115 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLI_RS04115 IPR029056 Ribokinase-like CLI_RS04120 IPR030902 CLI_RS04120 CLI_RS04125 IPR009577 Putative small multi-drug export CLI_RS04130 IPR003439 ABC transporter-like CLI_RS04130 IPR003593 AAA+ ATPase domain CLI_RS04130 IPR017871 ABC transporter, conserved site CLI_RS04130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04140 IPR001789 Signal transduction response regulator, receiver domain CLI_RS04140 IPR001867 Signal transduction response regulator, C-terminal CLI_RS04140 IPR011006 CheY-like superfamily CLI_RS04140 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04145 IPR003439 ABC transporter-like CLI_RS04145 IPR003593 AAA+ ATPase domain CLI_RS04145 IPR017871 ABC transporter, conserved site CLI_RS04145 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04150 IPR032688 CLI_RS04150 CLI_RS04155 IPR009057 Homeodomain-like CLI_RS04155 IPR010499 Bacterial transcription activator, effector binding CLI_RS04155 IPR011256 Regulatory factor, effector binding domain CLI_RS04155 IPR018060 DNA binding HTH domain, AraC-type CLI_RS04155 IPR020449 Transcription regulator HTH, AraC- type CLI_RS04155 IPR029441 Integron-associated effector binding protein CLI_RS04160 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04160 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS04160 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB CLI_RS04165 IPR025062 Protein of unknown function DUF4003 CLI_RS04175 IPR003439 ABC transporter-like CLI_RS04175 IPR003593 AAA+ ATPase domain CLI_RS04175 IPR017871 ABC transporter, conserved site CLI_RS04175 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04180 IPR003838 Permease FtsX-like CLI_RS04190 IPR001789 Signal transduction response regulator, receiver domain CLI_RS04190 IPR001867 Signal transduction response regulator, C-terminal CLI_RS04190 IPR011006 CheY-like superfamily CLI_RS04190 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04190 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS04195 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04195 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS04195 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS04200 IPR003741 Domain of unknown function DUF162 CLI_RS04200 IPR009501 Uncharacterised conserved protein UCP020269 CLI_RS04200 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLI_RS04205 IPR012610 Small acid-soluble spore protein, SspH CLI_RS04210 IPR009825 ECF transporter, substrate-specific component-like CLI_RS04215 IPR000846 Dihydrodipicolinate reductase, N-terminal CLI_RS04215 IPR016040 NAD(P)-binding domain CLI_RS04215 IPR022663 Dihydrodipicolinate reductase, C-terminal CLI_RS04215 IPR022664 Dihydrodipicolinate reductase, conserved site CLI_RS04215 IPR023940 Dihydrodipicolinate reductase, bacterial CLI_RS04220 IPR001763 Rhodanese-like domain CLI_RS04235 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS04260 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS04260 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS04265 IPR001466 Beta-lactamase-related CLI_RS04265 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS04270 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS04270 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS04275 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS04290 IPR006680 Amidohydrolase 1 CLI_RS04290 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS04290 IPR032466 CLI_RS04290 CLI_RS04295 IPR004685 Branched-chain amino acid transport system II carrier protein CLI_RS04300 IPR004685 Branched-chain amino acid transport system II carrier protein CLI_RS04305 IPR000914 Bacterial extracellular solute-binding protein, family 5 CLI_RS04305 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS04305 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CLI_RS04310 IPR007167 Ferrous iron transporter FeoA domain CLI_RS04310 IPR008988 Transcriptional repressor, C-terminal CLI_RS04315 IPR003373 Ferrous iron transport protein B CLI_RS04315 IPR011619 Ferrous iron transport protein B, N-terminal CLI_RS04315 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04320 IPR003373 Ferrous iron transport protein B CLI_RS04320 IPR011640 Ferrous iron transport protein B, C-terminal CLI_RS04320 IPR011642 Nucleoside recognition Gate CLI_RS04325 IPR001345 Phosphoglycerate/bisphosphoglycerate mutase, active site CLI_RS04325 IPR013078 Histidine phosphatase superfamily, clade-1 CLI_RS04325 IPR017578 Alpha-ribazole phosphatase, CobC CLI_RS04325 IPR029033 Histidine phosphatase superfamily CLI_RS04330 IPR007391 Vancomycin resistance VanW CLI_RS04330 IPR011098 G5 domain CLI_RS04330 IPR022029 Putative peptidoglycan binding domain CLI_RS04335 IPR003805 Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase CLI_RS04345 IPR027890 Protein of unknown function DUF4491 CLI_RS04355 IPR012851 Spore coat protein CotF-like CLI_RS04360 IPR012854 Copper amine oxidase-like, N-terminal CLI_RS04360 IPR018763 Protein of unknown function DUF2334 CLI_RS04365 IPR014925 Uncharacterised domain CGGC-dom CLI_RS04370 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS04375 IPR000489 Pterin-binding CLI_RS04375 IPR006390 Dihydropteroate synthase CLI_RS04375 IPR011005 Dihydropteroate synthase-like CLI_RS04380 IPR033470 CLI_RS04380 CLI_RS04385 IPR000550 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK CLI_RS04390 IPR002068 Alpha crystallin/Hsp20 domain CLI_RS04390 IPR008978 HSP20-like chaperone CLI_RS04390 IPR031107 CLI_RS04390 CLI_RS04395 IPR000551 MerR-type HTH domain CLI_RS04395 IPR009061 DNA binding domain, putative CLI_RS04395 IPR013216 Methyltransferase type 11 CLI_RS04395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS04400 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS04400 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS04400 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS04400 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04405 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS04405 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS04405 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS04405 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04415 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS04415 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS04415 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04415 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS04415 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS04415 IPR014284 RNA polymerase sigma-70 like domain CLI_RS04415 IPR014300 RNA polymerase sigma-V type CLI_RS04420 IPR025436 Domain of unknown function DUF4179 CLI_RS04425 IPR002563 Flavin reductase-like, FMN-binding CLI_RS04425 IPR012349 FMN-binding split barrel CLI_RS04430 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04430 IPR000639 Epoxide hydrolase-like CLI_RS04430 IPR029058 Alpha/Beta hydrolase fold CLI_RS04435 IPR004676 Cadmium resistance transporter CLI_RS04440 IPR007553 Domain of unknown function DUF523 CLI_RS04445 IPR029032 AhpD-like CLI_RS04450 IPR000485 AsnC-type HTH domain CLI_RS04450 IPR011008 Dimeric alpha-beta barrel CLI_RS04450 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04450 IPR019885 Transcription regulator HTH, AsnC-type, conserved site CLI_RS04450 IPR019887 Transcription regulator AsnC-type, C-terminal CLI_RS04450 IPR019888 Transcription regulator AsnC-type CLI_RS04460 IPR032688 CLI_RS04460 CLI_RS04465 IPR003439 ABC transporter-like CLI_RS04465 IPR003593 AAA+ ATPase domain CLI_RS04465 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04475 IPR023811 Conserved hypothetical protein CHP04076 CLI_RS04480 IPR029032 AhpD-like CLI_RS04485 IPR000182 GNAT domain CLI_RS04485 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04490 IPR001646 Pentapeptide repeat CLI_RS04490 IPR012334 Pectin lyase fold CLI_RS04495 IPR000551 MerR-type HTH domain CLI_RS04495 IPR009061 DNA binding domain, putative CLI_RS04500 IPR000182 GNAT domain CLI_RS04500 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04505 IPR007344 GrpB/Dephospho-CoA kinase CLI_RS04510 IPR000182 GNAT domain CLI_RS04510 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04515 IPR003829 Pirin, N-terminal domain CLI_RS04515 IPR011051 RmlC-like cupin domain CLI_RS04515 IPR012093 Pirin CLI_RS04515 IPR014710 RmlC-like jelly roll fold CLI_RS04520 IPR002577 Helix-turn-helix, HxlR type CLI_RS04520 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04525 IPR000415 Nitroreductase-like CLI_RS04525 IPR029479 Nitroreductase CLI_RS04530 IPR029058 Alpha/Beta hydrolase fold CLI_RS04535 IPR006045 Cupin 1 CLI_RS04535 IPR011051 RmlC-like cupin domain CLI_RS04535 IPR014710 RmlC-like jelly roll fold CLI_RS04535 IPR017774 Bicupin, oxalate decarboxylase/oxidase CLI_RS04540 IPR005269 Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG CLI_RS04540 IPR031100 CLI_RS04540 CLI_RS04545 IPR006750 Protein of unknown function DUF606 CLI_RS04550 IPR000847 Transcription regulator HTH, LysR CLI_RS04550 IPR005119 LysR, substrate-binding CLI_RS04550 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04560 IPR023214 HAD-like domain CLI_RS04565 IPR006750 Protein of unknown function DUF606 CLI_RS04570 IPR006750 Protein of unknown function DUF606 CLI_RS04575 IPR000595 Cyclic nucleotide-binding domain CLI_RS04575 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04575 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS04575 IPR014710 RmlC-like jelly roll fold CLI_RS04575 IPR018490 Cyclic nucleotide-binding-like CLI_RS04580 IPR012349 FMN-binding split barrel CLI_RS04585 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04585 IPR013196 Helix-turn-helix, type 11 CLI_RS04585 IPR026881 WYL domain CLI_RS04585 IPR028349 Protein PafB/PafC CLI_RS04590 IPR024528 Domain of unknown function DUF3815 CLI_RS04595 IPR010619 Domain of unknown function DUF1212 CLI_RS04600 IPR009061 DNA binding domain, putative CLI_RS04605 IPR000181 Formylmethionine deformylase CLI_RS04605 IPR023635 Peptide deformylase CLI_RS04610 IPR000524 Transcription regulator HTH, GntR CLI_RS04610 IPR004839 Aminotransferase, class I/classII CLI_RS04610 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04610 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS04610 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04615 IPR009057 Homeodomain-like CLI_RS04615 IPR018060 DNA binding HTH domain, AraC-type CLI_RS04615 IPR018062 HTH domain AraC-type, conserved site CLI_RS04615 IPR020449 Transcription regulator HTH, AraC- type CLI_RS04620 IPR000415 Nitroreductase-like CLI_RS04620 IPR029479 Nitroreductase CLI_RS04630 IPR004341 CAT RNA-binding domain CLI_RS04630 IPR011608 PRD domain CLI_RS04635 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS04635 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS04635 IPR003352 Phosphotransferase system, EIIC CLI_RS04635 IPR011055 Duplicated hybrid motif CLI_RS04635 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CLI_RS04635 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS04640 IPR001360 Glycoside hydrolase, family 1 CLI_RS04640 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS04640 IPR017853 Glycoside hydrolase, superfamily CLI_RS04640 IPR018120 Glycoside hydrolase, family 1, active site CLI_RS04640 IPR033132 CLI_RS04640 CLI_RS04650 IPR000715 Glycosyl transferase, family 4 CLI_RS04650 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CLI_RS04650 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CLI_RS04655 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS04655 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS04660 IPR001789 Signal transduction response regulator, receiver domain CLI_RS04660 IPR001867 Signal transduction response regulator, C-terminal CLI_RS04660 IPR011006 CheY-like superfamily CLI_RS04660 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04665 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04665 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS04665 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS04670 IPR003439 ABC transporter-like CLI_RS04670 IPR003593 AAA+ ATPase domain CLI_RS04670 IPR017871 ABC transporter, conserved site CLI_RS04670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04675 IPR003838 Permease FtsX-like CLI_RS04680 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS04680 IPR009057 Homeodomain-like CLI_RS04680 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS04685 IPR007197 Radical SAM CLI_RS04685 IPR013785 Aldolase-type TIM barrel CLI_RS04695 IPR000551 MerR-type HTH domain CLI_RS04695 IPR009061 DNA binding domain, putative CLI_RS04695 IPR012925 TipAS antibiotic-recognition domain CLI_RS04700 IPR000249 Microcompartment protein, bacteria CLI_RS04700 IPR009193 Polyhedral organelle shell protein, EutL/PduB type CLI_RS04700 IPR030984 CLI_RS04700 CLI_RS04705 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS04705 IPR002410 Peptidase S33 CLI_RS04705 IPR029058 Alpha/Beta hydrolase fold CLI_RS04710 IPR003199 Choloylglycine hydrolase/Peptidase C59 family CLI_RS04710 IPR005079 Peptidase C45 CLI_RS04710 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS04715 IPR009057 Homeodomain-like CLI_RS04715 IPR010499 Bacterial transcription activator, effector binding CLI_RS04715 IPR011256 Regulatory factor, effector binding domain CLI_RS04715 IPR018060 DNA binding HTH domain, AraC-type CLI_RS04715 IPR018062 HTH domain AraC-type, conserved site CLI_RS04715 IPR020449 Transcription regulator HTH, AraC- type CLI_RS04715 IPR029441 Integron-associated effector binding protein CLI_RS04720 IPR007466 Peptidyl-arginine deiminase, Porphyromonas-type CLI_RS04725 IPR010499 Bacterial transcription activator, effector binding CLI_RS04725 IPR011256 Regulatory factor, effector binding domain CLI_RS04730 IPR000620 Drug/metabolite transporter CLI_RS04735 IPR007344 GrpB/Dephospho-CoA kinase CLI_RS04740 IPR005490 L,D-transpeptidase catalytic domain CLI_RS04750 IPR024307 YmaF CLI_RS04775 IPR003439 ABC transporter-like CLI_RS04775 IPR003593 AAA+ ATPase domain CLI_RS04775 IPR003838 Permease FtsX-like CLI_RS04775 IPR017871 ABC transporter, conserved site CLI_RS04775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04780 IPR001789 Signal transduction response regulator, receiver domain CLI_RS04780 IPR001867 Signal transduction response regulator, C-terminal CLI_RS04780 IPR011006 CheY-like superfamily CLI_RS04780 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS04785 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS04785 IPR003660 HAMP linker domain CLI_RS04785 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS04785 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS04790 IPR003784 BioY protein CLI_RS04795 IPR006597 Sel1-like CLI_RS04795 IPR011990 Tetratricopeptide-like helical domain CLI_RS04800 IPR000182 GNAT domain CLI_RS04800 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04805 IPR000212 DNA helicase, UvrD/REP type CLI_RS04805 IPR006197 Peptidase S24, LexA-like CLI_RS04805 IPR014016 UvrD-like Helicase, ATP-binding domain CLI_RS04805 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS04805 IPR019759 Peptidase S24/S26A/S26B CLI_RS04805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04805 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS04810 IPR003203 Cobinamide kinase/cobinamide phosphate guanyltransferase CLI_RS04810 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04815 IPR000551 MerR-type HTH domain CLI_RS04815 IPR009061 DNA binding domain, putative CLI_RS04815 IPR012925 TipAS antibiotic-recognition domain CLI_RS04830 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS04830 IPR004459 Cobyric acid synthase CobQ CLI_RS04830 IPR011698 CobB/CobQ-like glutamine amidotransferase CLI_RS04830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04830 IPR029062 Class I glutamine amidotransferase-like CLI_RS04835 IPR004485 Cobalamin biosynthesis CobD/CbiB CLI_RS04840 IPR004839 Aminotransferase, class I/classII CLI_RS04840 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS04840 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS04840 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS04845 IPR002751 Cobalamin (vitamin B12) biosynthesis CbiM family CLI_RS04845 IPR018024 Cobalamin (vitamin B12) biosynthesis protein CbiM CLI_RS04850 IPR003705 Cobalt transport protein CbiN CLI_RS04855 IPR003339 ABC/ECF transporter, transmembrane component CLI_RS04855 IPR012809 ECF transporter, transmembrane component CbiQ/NikQ CLI_RS04860 IPR006367 Sirohaem synthase, N-terminal CLI_RS04860 IPR016040 NAD(P)-binding domain CLI_RS04865 IPR000860 Tetrapyrrole biosynthesis, hydroxymethylbilane synthase CLI_RS04865 IPR022417 Porphobilinogen deaminase, N-terminal CLI_RS04865 IPR022418 Porphobilinogen deaminase, C-terminal CLI_RS04870 IPR000878 Tetrapyrrole methylase CLI_RS04870 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLI_RS04870 IPR003754 Tetrapyrrole biosynthesis, uroporphyrinogen III synthase CLI_RS04870 IPR006366 Uroporphyrin-III C-methyltransferase CLI_RS04870 IPR014776 Tetrapyrrole methylase, subdomain 2 CLI_RS04870 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS04880 IPR001731 Porphobilinogen synthase CLI_RS04880 IPR013785 Aldolase-type TIM barrel CLI_RS04880 IPR030656 CLI_RS04880 CLI_RS04885 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS04885 IPR004484 Cobyrinic acid a,c-diamide synthase CbiA CLI_RS04885 IPR011698 CobB/CobQ-like glutamine amidotransferase CLI_RS04885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04885 IPR029062 Class I glutamine amidotransferase-like CLI_RS04890 IPR005025 NADPH-dependent FMN reductase-like CLI_RS04890 IPR029039 Flavoprotein-like CLI_RS04895 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS04895 IPR011004 Trimeric LpxA-like CLI_RS04895 IPR018357 Hexapeptide transferase, conserved site CLI_RS04895 IPR024688 Maltose/galactoside acetyltransferase CLI_RS04900 IPR003722 Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase CLI_RS04905 IPR003593 AAA+ ATPase domain CLI_RS04905 IPR003959 ATPase, AAA-type, core CLI_RS04905 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS04910 IPR000551 MerR-type HTH domain CLI_RS04910 IPR009061 DNA binding domain, putative CLI_RS04915 IPR032256 CLI_RS04915 CLI_RS04920 IPR000182 GNAT domain CLI_RS04920 IPR016181 Acyl-CoA N-acyltransferase CLI_RS04930 IPR000415 Nitroreductase-like CLI_RS04930 IPR029479 Nitroreductase CLI_RS04940 IPR007344 GrpB/Dephospho-CoA kinase CLI_RS04945 IPR002748 Cobalamin (vitamin B12) biosynthesis CbiD CLI_RS04950 IPR000878 Tetrapyrrole methylase CLI_RS04950 IPR012818 Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase CLI_RS04950 IPR014776 Tetrapyrrole methylase, subdomain 2 CLI_RS04950 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS04955 IPR025962 SdpI/YhfL protein family CLI_RS04960 IPR014008 Cobalamin biosynthesis, precorrin-6Y methyltransferase, CbiT subunit CLI_RS04960 IPR020596 Ribosomal RNA adenine methylase transferase, conserved site CLI_RS04960 IPR025714 Methyltransferase domain CLI_RS04960 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS04990 IPR013823 Ribosomal protein L7/L12, C-terminal CLI_RS04990 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLI_RS04995 IPR000182 GNAT domain CLI_RS04995 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05000 IPR028959 Immunity protein 22 CLI_RS05005 IPR000878 Tetrapyrrole methylase CLI_RS05005 IPR006364 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core CLI_RS05005 IPR012382 Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase CLI_RS05005 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS05010 IPR000878 Tetrapyrrole methylase CLI_RS05010 IPR003043 Uroporphiryn-III C-methyltransferase, conserved site CLI_RS05010 IPR006362 Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase CLI_RS05010 IPR014776 Tetrapyrrole methylase, subdomain 2 CLI_RS05010 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS05015 IPR002750 CobE/GbiG C-terminal domain CLI_RS05015 IPR021744 Cobalamin synthesis G, N-terminal CLI_RS05015 IPR021745 Cobalamin biosynthesis central region CLI_RS05020 IPR000878 Tetrapyrrole methylase CLI_RS05020 IPR006363 Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core CLI_RS05020 IPR014776 Tetrapyrrole methylase, subdomain 2 CLI_RS05020 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS05025 IPR003723 Precorrin-6x reductase CLI_RS05030 IPR024529 ECF transporter, substrate-specific component CLI_RS05035 IPR010388 Anaerobic cobalt chelatase CLI_RS05040 IPR006204 GHMP kinase N-terminal domain CLI_RS05040 IPR012363 Propanediol utilisation/coumermycin biosynthesis, PduX-related CLI_RS05040 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS05040 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS05045 IPR003724 Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase CobA/CobO/ButR CLI_RS05045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05050 IPR000595 Cyclic nucleotide-binding domain CLI_RS05050 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05050 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS05050 IPR014710 RmlC-like jelly roll fold CLI_RS05050 IPR018490 Cyclic nucleotide-binding-like CLI_RS05055 IPR000292 Formate/nitrite transporter CLI_RS05055 IPR023271 Aquaporin-like CLI_RS05055 IPR024002 Formate/nitrite transporter, conserved site CLI_RS05060 IPR009051 Alpha-helical ferredoxin CLI_RS05060 IPR014259 Sulphite reductase, subunit A CLI_RS05060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS05060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS05065 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLI_RS05065 IPR001834 NADH:cytochrome b5 reductase (CBR) CLI_RS05065 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit CLI_RS05065 IPR014260 Sulphite reductase, subunit B CLI_RS05065 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS05065 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLI_RS05070 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CLI_RS05070 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site CLI_RS05070 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CLI_RS05070 IPR014261 Sulphite reductase, subunit C CLI_RS05070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS05070 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS05075 IPR001453 Molybdopterin binding domain CLI_RS05090 IPR003439 ABC transporter-like CLI_RS05090 IPR003593 AAA+ ATPase domain CLI_RS05090 IPR017871 ABC transporter, conserved site CLI_RS05090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05100 IPR001789 Signal transduction response regulator, receiver domain CLI_RS05100 IPR001867 Signal transduction response regulator, C-terminal CLI_RS05100 IPR011006 CheY-like superfamily CLI_RS05100 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05100 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS05105 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05105 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS05105 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS05110 IPR003439 ABC transporter-like CLI_RS05110 IPR003593 AAA+ ATPase domain CLI_RS05110 IPR017871 ABC transporter, conserved site CLI_RS05110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05115 IPR000522 ABC transporter, permease protein CLI_RS05115 IPR029022 ABC transporter, BtuC-like CLI_RS05120 IPR002491 ABC transporter periplasmic binding domain CLI_RS05125 IPR004006 Dak kinase CLI_RS05125 IPR004007 DhaL domain CLI_RS05125 IPR012736 Dihydroxyacetone kinase DhaK, subunit 1 CLI_RS05125 IPR012737 Dihydroxyacetone kinase, subunit L CLI_RS05130 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS05130 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLI_RS05135 IPR009057 Homeodomain-like CLI_RS05135 IPR018060 DNA binding HTH domain, AraC-type CLI_RS05135 IPR018062 HTH domain AraC-type, conserved site CLI_RS05135 IPR018771 PocR domain CLI_RS05135 IPR020449 Transcription regulator HTH, AraC- type CLI_RS05140 IPR000182 GNAT domain CLI_RS05140 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05145 IPR000182 GNAT domain CLI_RS05145 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05150 IPR009784 Protein of unknown function DUF1349 CLI_RS05150 IPR013320 Concanavalin A-like lectin/glucanase, subgroup CLI_RS05150 IPR015987 Uncharacterised conserved protein UCP022704 CLI_RS05155 IPR024265 Protein of unknown function DUF3788 CLI_RS05160 IPR001395 Aldo/keto reductase CLI_RS05160 IPR018170 Aldo/keto reductase, conserved site CLI_RS05160 IPR020471 Aldo/keto reductase subgroup CLI_RS05160 IPR023210 NADP-dependent oxidoreductase domain CLI_RS05165 IPR007076 TfoX, N-terminal CLI_RS05170 IPR000182 GNAT domain CLI_RS05170 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05175 IPR012674 Calycin CLI_RS05180 IPR001365 Adenosine/AMP deaminase domain CLI_RS05180 IPR006330 Adenosine/adenine deaminase CLI_RS05180 IPR028893 Adenosine deaminase CLI_RS05180 IPR032466 CLI_RS05180 CLI_RS05185 IPR017500 Phage infection protein, YhgE, N-terminal CLI_RS05185 IPR017501 Phage infection protein, YhgE, C-terminal CLI_RS05190 IPR017500 Phage infection protein, YhgE, N-terminal CLI_RS05190 IPR017501 Phage infection protein, YhgE, C-terminal CLI_RS05200 IPR025238 Protein of unknown function DUF4184 CLI_RS05205 IPR001650 Helicase, C-terminal CLI_RS05205 IPR002121 HRDC domain CLI_RS05205 IPR004589 DNA helicase, ATP-dependent, RecQ type CLI_RS05205 IPR006293 DNA helicase, ATP-dependent, RecQ type, bacterial CLI_RS05205 IPR010997 HRDC-like CLI_RS05205 IPR011545 DEAD/DEAH box helicase domain CLI_RS05205 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05205 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS05205 IPR018982 RQC domain CLI_RS05205 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05205 IPR029491 Helicase Helix-turn-helix domain CLI_RS05205 IPR032284 CLI_RS05205 CLI_RS05210 IPR003251 Rubrerythrin CLI_RS05210 IPR009078 Ferritin-like superfamily CLI_RS05210 IPR012347 Ferritin-related CLI_RS05215 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS05215 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLI_RS05215 IPR029052 Metallo-dependent phosphatase-like CLI_RS05220 IPR001789 Signal transduction response regulator, receiver domain CLI_RS05220 IPR011006 CheY-like superfamily CLI_RS05225 IPR011990 Tetratricopeptide-like helical domain CLI_RS05225 IPR021729 Domain of unknown function DUF3298 CLI_RS05225 IPR025303 Domain of unknown function DUF4163 CLI_RS05225 IPR032774 CLI_RS05225 CLI_RS05230 IPR021375 Protein of unknown function DUF2997 CLI_RS05235 IPR010994 RuvA domain 2-like CLI_RS05240 IPR007197 Radical SAM CLI_RS05240 IPR012837 Ribonucleoside-triphosphate reductase activating, anaerobic CLI_RS05240 IPR013785 Aldolase-type TIM barrel CLI_RS05245 IPR003593 AAA+ ATPase domain CLI_RS05245 IPR003959 ATPase, AAA-type, core CLI_RS05245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05255 IPR003804 L-lactate permease CLI_RS05260 IPR018657 Domain of unknown function DUF2088 CLI_RS05265 IPR012255 Electron transfer flavoprotein, beta subunit CLI_RS05265 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05265 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS05270 IPR001308 Electron transfer flavoprotein, alpha subunit CLI_RS05270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05270 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS05270 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS05270 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS05275 IPR004113 FAD-linked oxidase, C-terminal CLI_RS05275 IPR006094 FAD linked oxidase, N-terminal CLI_RS05275 IPR016164 FAD-linked oxidase-like, C-terminal CLI_RS05275 IPR016166 FAD-binding, type 2 CLI_RS05275 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS05275 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS05275 IPR016171 Vanillyl-alcohol oxidase, C-terminal subdomain 2 CLI_RS05290 IPR000835 MarR-type HTH domain CLI_RS05290 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05295 IPR007325 Kynurenine formamidase CLI_RS05300 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLI_RS05300 IPR004839 Aminotransferase, class I/classII CLI_RS05300 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS05300 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS05300 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS05305 IPR007325 Kynurenine formamidase CLI_RS05310 IPR000835 MarR-type HTH domain CLI_RS05310 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05315 IPR000551 MerR-type HTH domain CLI_RS05315 IPR009061 DNA binding domain, putative CLI_RS05315 IPR010499 Bacterial transcription activator, effector binding CLI_RS05315 IPR011256 Regulatory factor, effector binding domain CLI_RS05315 IPR029442 GyrI-like small molecule binding domain CLI_RS05320 IPR005146 B3/B4 tRNA-binding domain CLI_RS05320 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS05325 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLI_RS05325 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLI_RS05325 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLI_RS05325 IPR004523 Aspartyl-tRNA synthetases CLI_RS05325 IPR012340 Nucleic acid-binding, OB-fold CLI_RS05325 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like CLI_RS05330 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05335 IPR009577 Putative small multi-drug export CLI_RS05340 IPR026816 Flavodoxin domain CLI_RS05340 IPR029039 Flavoprotein-like CLI_RS05345 IPR000462 CDP-alcohol phosphatidyltransferase CLI_RS05345 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CLI_RS05350 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS05350 IPR009057 Homeodomain-like CLI_RS05350 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS05350 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS05350 IPR025996 WHG domain CLI_RS05355 IPR026816 Flavodoxin domain CLI_RS05355 IPR029039 Flavoprotein-like CLI_RS05360 IPR006439 HAD hydrolase, subfamily IA CLI_RS05360 IPR006549 HAD-superfamily hydrolase,subfamily IIIA CLI_RS05360 IPR011951 HAD-superfamily hydrolase, subfamily IA, YjjG/YfnB CLI_RS05360 IPR023198 Phosphoglycolate phosphatase, domain 2 CLI_RS05360 IPR023214 HAD-like domain CLI_RS05365 IPR000595 Cyclic nucleotide-binding domain CLI_RS05365 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05365 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS05365 IPR014710 RmlC-like jelly roll fold CLI_RS05365 IPR018490 Cyclic nucleotide-binding-like CLI_RS05370 IPR002818 ThiJ/PfpI CLI_RS05370 IPR029062 Class I glutamine amidotransferase-like CLI_RS05375 IPR000847 Transcription regulator HTH, LysR CLI_RS05375 IPR005119 LysR, substrate-binding CLI_RS05375 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05380 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLI_RS05380 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS05380 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05380 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS05380 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS05380 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS05380 IPR014284 RNA polymerase sigma-70 like domain CLI_RS05385 IPR024227 Protein of unknown function DUF3795 CLI_RS05390 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05390 IPR025685 YoaP-like domain CLI_RS05395 IPR007167 Ferrous iron transporter FeoA domain CLI_RS05395 IPR008988 Transcriptional repressor, C-terminal CLI_RS05400 IPR007167 Ferrous iron transporter FeoA domain CLI_RS05400 IPR008988 Transcriptional repressor, C-terminal CLI_RS05405 IPR003373 Ferrous iron transport protein B CLI_RS05405 IPR005225 Small GTP-binding protein domain CLI_RS05405 IPR006073 GTP binding domain CLI_RS05405 IPR011619 Ferrous iron transport protein B, N-terminal CLI_RS05405 IPR011640 Ferrous iron transport protein B, C-terminal CLI_RS05405 IPR011642 Nucleoside recognition Gate CLI_RS05405 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05415 IPR007353 Protein of unknown function DUF421 CLI_RS05415 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS05420 IPR000182 GNAT domain CLI_RS05420 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05425 IPR003709 Peptidase M15B/M15C CLI_RS05425 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLI_RS05430 IPR017524 Small acid-soluble spore protein, thioredoxin-like CLI_RS05435 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS05435 IPR009057 Homeodomain-like CLI_RS05435 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS05435 IPR013570 Transcription regulator YsiA, C-terminal CLI_RS05435 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS05440 IPR000587 Creatinase, N-terminal CLI_RS05440 IPR000994 Peptidase M24, structural domain CLI_RS05440 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS05440 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS05445 IPR001789 Signal transduction response regulator, receiver domain CLI_RS05445 IPR001867 Signal transduction response regulator, C-terminal CLI_RS05445 IPR011006 CheY-like superfamily CLI_RS05445 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05445 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS05450 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05450 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS05450 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS05460 IPR001128 Cytochrome P450 CLI_RS05460 IPR002401 Cytochrome P450, E-class, group I CLI_RS05465 IPR006121 Heavy metal-associated domain, HMA CLI_RS05465 IPR017969 Heavy-metal-associated, conserved site CLI_RS05475 IPR018649 Domain of unknown function DUF2078 CLI_RS05480 IPR001789 Signal transduction response regulator, receiver domain CLI_RS05480 IPR001867 Signal transduction response regulator, C-terminal CLI_RS05480 IPR011006 CheY-like superfamily CLI_RS05480 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05480 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS05485 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05485 IPR003660 HAMP linker domain CLI_RS05485 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS05485 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS05490 IPR014825 DNA alkylation repair enzyme CLI_RS05490 IPR016024 Armadillo-type fold CLI_RS05495 IPR009057 Homeodomain-like CLI_RS05495 IPR018060 DNA binding HTH domain, AraC-type CLI_RS05495 IPR018062 HTH domain AraC-type, conserved site CLI_RS05495 IPR020449 Transcription regulator HTH, AraC- type CLI_RS05500 IPR000522 ABC transporter, permease protein CLI_RS05500 IPR029022 ABC transporter, BtuC-like CLI_RS05505 IPR000522 ABC transporter, permease protein CLI_RS05505 IPR029022 ABC transporter, BtuC-like CLI_RS05510 IPR003439 ABC transporter-like CLI_RS05510 IPR003593 AAA+ ATPase domain CLI_RS05510 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05515 IPR002491 ABC transporter periplasmic binding domain CLI_RS05520 IPR009057 Homeodomain-like CLI_RS05520 IPR018060 DNA binding HTH domain, AraC-type CLI_RS05520 IPR018062 HTH domain AraC-type, conserved site CLI_RS05520 IPR020449 Transcription regulator HTH, AraC- type CLI_RS05525 IPR003439 ABC transporter-like CLI_RS05525 IPR003593 AAA+ ATPase domain CLI_RS05525 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS05525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05530 IPR003439 ABC transporter-like CLI_RS05530 IPR003593 AAA+ ATPase domain CLI_RS05530 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS05530 IPR017871 ABC transporter, conserved site CLI_RS05530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05535 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05535 IPR032834 CLI_RS05535 CLI_RS05540 IPR001789 Signal transduction response regulator, receiver domain CLI_RS05540 IPR007492 LytTR DNA-binding domain CLI_RS05540 IPR011006 CheY-like superfamily CLI_RS05550 IPR001434 Domain of unknown function DUF11 CLI_RS05550 IPR013783 Immunoglobulin-like fold CLI_RS05555 IPR001223 Glycoside hydrolase, family 18, catalytic domain CLI_RS05555 IPR001579 Glycoside hydrolase, chitinase active site CLI_RS05555 IPR011583 Chitinase II CLI_RS05555 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS05555 IPR017853 Glycoside hydrolase, superfamily CLI_RS05565 IPR004879 Domain of unknown function DUF255 CLI_RS05565 IPR008928 Six-hairpin glycosidase-like CLI_RS05565 IPR012336 Thioredoxin-like fold CLI_RS05565 IPR012341 Six-hairpin glycosidase CLI_RS05565 IPR024705 Spermatogenesis-associated protein 20 CLI_RS05570 IPR010343 Protein of unknown function DUF939 CLI_RS05570 IPR021062 Protein of unknown function DUF939, C-terminal CLI_RS05575 IPR011009 Protein kinase-like domain CLI_RS05580 IPR003675 CAAX amino terminal protease CLI_RS05585 IPR001279 Beta-lactamase-like CLI_RS05590 IPR003439 ABC transporter-like CLI_RS05590 IPR003593 AAA+ ATPase domain CLI_RS05590 IPR017871 ABC transporter, conserved site CLI_RS05590 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05590 IPR032524 CLI_RS05590 CLI_RS05590 IPR032781 CLI_RS05590 CLI_RS05600 IPR006660 Arsenate reductase-like CLI_RS05600 IPR012336 Thioredoxin-like fold CLI_RS05605 IPR007197 Radical SAM CLI_RS05605 IPR013785 Aldolase-type TIM barrel CLI_RS05605 IPR023885 4Fe4S-binding SPASM domain CLI_RS05610 IPR006076 FAD dependent oxidoreductase CLI_RS05610 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS05610 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS05615 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS05620 IPR012460 Protein of unknown function DUF1667 CLI_RS05625 IPR000849 Sugar phosphate transporter CLI_RS05625 IPR005267 Glycerol-3-phosphate transporter CLI_RS05625 IPR011701 Major facilitator superfamily CLI_RS05625 IPR020846 Major facilitator superfamily domain CLI_RS05625 IPR021159 Glycerate/sugar phosphate transporter, conserved site CLI_RS05630 IPR001278 Arginine-tRNA ligase CLI_RS05630 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS05630 IPR005148 Arginyl tRNA synthetase N-terminal domain CLI_RS05630 IPR008909 DALR anticodon binding CLI_RS05630 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLI_RS05630 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05640 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLI_RS05640 IPR004839 Aminotransferase, class I/classII CLI_RS05640 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS05640 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS05640 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS05645 IPR000644 CBS domain CLI_RS05655 IPR003373 Ferrous iron transport protein B CLI_RS05655 IPR011619 Ferrous iron transport protein B, N-terminal CLI_RS05655 IPR011640 Ferrous iron transport protein B, C-terminal CLI_RS05655 IPR011642 Nucleoside recognition Gate CLI_RS05655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05660 IPR007167 Ferrous iron transporter FeoA domain CLI_RS05660 IPR008988 Transcriptional repressor, C-terminal CLI_RS05665 IPR009875 PilZ domain CLI_RS05670 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like CLI_RS05670 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CLI_RS05670 IPR023214 HAD-like domain CLI_RS05675 IPR001223 Glycoside hydrolase, family 18, catalytic domain CLI_RS05675 IPR003610 Carbohydrate-binding module family 5/12 CLI_RS05675 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS05675 IPR017853 Glycoside hydrolase, superfamily CLI_RS05680 IPR000182 GNAT domain CLI_RS05680 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05685 IPR003439 ABC transporter-like CLI_RS05685 IPR003593 AAA+ ATPase domain CLI_RS05685 IPR017871 ABC transporter, conserved site CLI_RS05685 IPR018449 NIL domain CLI_RS05685 IPR026253 Methionine import ATP-binding protein MetN CLI_RS05685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05690 IPR000515 MetI-like domain CLI_RS05695 IPR004872 Lipoprotein NlpA family CLI_RS05700 IPR004872 Lipoprotein NlpA family CLI_RS05705 IPR002933 Peptidase M20 CLI_RS05705 IPR011650 Peptidase M20, dimerisation domain CLI_RS05705 IPR017439 Amidohydrolase CLI_RS05715 IPR012337 Ribonuclease H-like domain CLI_RS05725 IPR000524 Transcription regulator HTH, GntR CLI_RS05725 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS05725 IPR011711 GntR, C-terminal CLI_RS05725 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05730 IPR003740 Membrane Protein of unknown function DUF161 CLI_RS05730 IPR019264 Domain of unknown function DUF2179 CLI_RS05740 IPR000924 Glutamyl/glutaminyl-tRNA synthetase CLI_RS05740 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS05740 IPR004527 Glutamate-tRNA ligase, bacterial/mitochondrial CLI_RS05740 IPR008925 Aminoacyl-tRNA synthetase, class I, anticodon-binding CLI_RS05740 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS05740 IPR020058 Glutamyl/glutaminyl-tRNA synthetase, class Ib, catalytic domain CLI_RS05740 IPR020061 Glutamyl/glutaminyl-tRNA synthetase, class Ib, alpha-bundle domain CLI_RS05740 IPR020751 Aminoacyl-tRNA synthetase, class I, anticodon-binding domain, subdomain 2 CLI_RS05745 IPR006424 Glyceraldehyde-3-phosphate dehydrogenase, type I CLI_RS05745 IPR016040 NAD(P)-binding domain CLI_RS05745 IPR020828 Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain CLI_RS05745 IPR020829 Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain CLI_RS05745 IPR020830 Glyceraldehyde 3-phosphate dehydrogenase, active site CLI_RS05745 IPR020831 Glyceraldehyde/Erythrose phosphate dehydrogenase family CLI_RS05750 IPR001279 Beta-lactamase-like CLI_RS05750 IPR011108 RNA-metabolising metallo-beta-lactamase CLI_RS05750 IPR022712 Beta-Casp domain CLI_RS05760 IPR003607 HD/PDEase domain CLI_RS05760 IPR006674 HD domain CLI_RS05760 IPR006675 Uncharacterised domain HDIG CLI_RS05765 IPR012394 Aldehyde dehydrogenase NAD(P)-dependent CLI_RS05765 IPR015590 Aldehyde dehydrogenase domain CLI_RS05765 IPR016160 Aldehyde dehydrogenase, cysteine active site CLI_RS05765 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS05765 IPR016162 Aldehyde dehydrogenase, N-terminal CLI_RS05765 IPR016163 Aldehyde dehydrogenase, C-terminal CLI_RS05765 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLI_RS05770 IPR001463 Sodium:alanine symporter CLI_RS05775 IPR001463 Sodium:alanine symporter CLI_RS05780 IPR000835 MarR-type HTH domain CLI_RS05780 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05780 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS05785 IPR002528 Multi antimicrobial extrusion protein CLI_RS05790 IPR011990 Tetratricopeptide-like helical domain CLI_RS05790 IPR019734 Tetratricopeptide repeat CLI_RS05795 IPR021352 Protein of unknown function DUF2971 CLI_RS05800 IPR027020 Protein ynjB CLI_RS05805 IPR000515 MetI-like domain CLI_RS05810 IPR000515 MetI-like domain CLI_RS05815 IPR003439 ABC transporter-like CLI_RS05815 IPR003593 AAA+ ATPase domain CLI_RS05815 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS05815 IPR017871 ABC transporter, conserved site CLI_RS05815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05820 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05820 IPR016732 Uncharacterised conserved protein UCP018688 CLI_RS05820 IPR024320 Lysylphosphatidylglycerol synthetase, domain of unknown function DUF2156 CLI_RS05825 IPR000182 GNAT domain CLI_RS05825 IPR016181 Acyl-CoA N-acyltransferase CLI_RS05830 IPR005746 Thioredoxin CLI_RS05830 IPR012336 Thioredoxin-like fold CLI_RS05830 IPR013766 Thioredoxin domain CLI_RS05835 IPR005642 Protein of unknown function DUF340, prokaryotic membrane CLI_RS05840 IPR005642 Protein of unknown function DUF340, prokaryotic membrane CLI_RS05845 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS05845 IPR011004 Trimeric LpxA-like CLI_RS05845 IPR018357 Hexapeptide transferase, conserved site CLI_RS05845 IPR024688 Maltose/galactoside acetyltransferase CLI_RS05850 IPR003142 Biotin protein ligase, C-terminal CLI_RS05850 IPR004143 Biotin/lipoate A/B protein ligase CLI_RS05850 IPR004408 Biotin--acetyl-CoA-carboxylase ligase CLI_RS05850 IPR008988 Transcriptional repressor, C-terminal CLI_RS05850 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05850 IPR013196 Helix-turn-helix, type 11 CLI_RS05850 IPR030855 CLI_RS05850 CLI_RS05855 IPR006121 Heavy metal-associated domain, HMA CLI_RS05860 IPR000644 CBS domain CLI_RS05860 IPR005990 Inosine-5'-monophosphate dehydrogenase CLI_RS05865 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS05865 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS05865 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS05875 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLI_RS05880 IPR000644 CBS domain CLI_RS05880 IPR006667 SLC41 divalent cation transporters, integral membrane domain CLI_RS05880 IPR006668 Magnesium transporter, MgtE intracellular domain CLI_RS05880 IPR006669 Magnesium transporter MgtE CLI_RS05885 IPR000192 Aminotransferase class V domain CLI_RS05885 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS05885 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS05885 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS05885 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CLI_RS05890 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLI_RS05890 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLI_RS05890 IPR016040 NAD(P)-binding domain CLI_RS05890 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS05895 IPR008323 Uncharacterised conserved protein UCP033563 CLI_RS05900 IPR001279 Beta-lactamase-like CLI_RS05900 IPR008254 Flavodoxin/nitric oxide synthase CLI_RS05900 IPR016440 Rubredoxin-oxygen oxidoreductase CLI_RS05900 IPR029039 Flavoprotein-like CLI_RS05905 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS05905 IPR008275 CoA enzyme activase CLI_RS05905 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS05905 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLI_RS05910 IPR000060 BCCT transporter family CLI_RS05915 IPR000524 Transcription regulator HTH, GntR CLI_RS05915 IPR006037 Regulator of K+ conductance, C-terminal CLI_RS05915 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS05920 IPR002563 Flavin reductase-like, FMN-binding CLI_RS05920 IPR012349 FMN-binding split barrel CLI_RS05925 IPR000868 Isochorismatase-like CLI_RS05930 IPR001763 Rhodanese-like domain CLI_RS05935 IPR012347 Ferritin-related CLI_RS05940 IPR025346 Protein of unknown function DUF4250 CLI_RS05945 IPR011990 Tetratricopeptide-like helical domain CLI_RS05945 IPR019734 Tetratricopeptide repeat CLI_RS05950 IPR000836 Phosphoribosyltransferase domain CLI_RS05950 IPR010079 Xanthine phosphoribosyltransferase CLI_RS05950 IPR029057 Phosphoribosyltransferase-like CLI_RS05955 IPR024218 Protein of unknown function DUF3867 CLI_RS05960 IPR001763 Rhodanese-like domain CLI_RS05970 IPR002549 Uncharacterised protein family UPF0118 CLI_RS05975 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS05975 IPR011379 NTP Pyrophosphohydrolase MazG-related, GP37 CLI_RS05980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS05995 IPR001188 Bacterial periplasmic spermidine/putrescine-binding protein CLI_RS05995 IPR026045 Ferric binding protein CLI_RS06000 IPR000515 MetI-like domain CLI_RS06005 IPR003439 ABC transporter-like CLI_RS06005 IPR003593 AAA+ ATPase domain CLI_RS06005 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS06005 IPR013611 Transport-associated OB, type 2 CLI_RS06005 IPR017871 ABC transporter, conserved site CLI_RS06005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06010 IPR026870 Zinc-ribbon domain CLI_RS06015 IPR025582 YARHG domain CLI_RS06015 IPR026870 Zinc-ribbon domain CLI_RS06020 IPR000110 Ribosomal protein S1 CLI_RS06020 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS06020 IPR012340 Nucleic acid-binding, OB-fold CLI_RS06020 IPR022967 RNA-binding domain, S1 CLI_RS06025 IPR006684 Acyl-CoA thioester hydrolase YbgC/YbaW family CLI_RS06025 IPR029069 HotDog domain CLI_RS06030 IPR015111 Hut operon regulatory protein HutP CLI_RS06035 IPR007487 ABC transporter, substrate-binding protein CLI_RS06035 IPR028082 Periplasmic binding protein-like I CLI_RS06040 IPR001851 ABC transporter, permease CLI_RS06045 IPR003439 ABC transporter-like CLI_RS06045 IPR003593 AAA+ ATPase domain CLI_RS06045 IPR017871 ABC transporter, conserved site CLI_RS06045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06055 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLI_RS06055 IPR004839 Aminotransferase, class I/classII CLI_RS06055 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS06055 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS06055 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS06055 IPR022518 Aspartate 4-decarboxylase CLI_RS06060 IPR000620 Drug/metabolite transporter CLI_RS06065 IPR011611 Carbohydrate kinase PfkB CLI_RS06065 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06065 IPR029056 Ribokinase-like CLI_RS06070 IPR007342 Pseudouridine-5'-phosphate glycosidase CLI_RS06075 IPR003710 Ketopantoate reductase ApbA/PanE CLI_RS06075 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLI_RS06075 IPR013328 Dehydrogenase, multihelical CLI_RS06075 IPR013332 Ketopantoate reductase, N-terminal domain CLI_RS06075 IPR013752 Ketopantoate reductase, C-terminal domain CLI_RS06075 IPR016040 NAD(P)-binding domain CLI_RS06080 IPR007044 Cyclodeaminase/cyclohydrolase CLI_RS06085 IPR000672 Tetrahydrofolate dehydrogenase/cyclohydrolase CLI_RS06085 IPR016040 NAD(P)-binding domain CLI_RS06085 IPR020630 Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain CLI_RS06085 IPR020631 Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain CLI_RS06090 IPR000150 Cof protein CLI_RS06090 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLI_RS06090 IPR023214 HAD-like domain CLI_RS06095 IPR000182 GNAT domain CLI_RS06095 IPR016181 Acyl-CoA N-acyltransferase CLI_RS06110 IPR003689 Zinc/iron permease CLI_RS06115 IPR000944 Transcription regulator Rrf2-like CLI_RS06115 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06120 IPR001216 Cysteine synthase/cystathionine beta-synthase, pyridoxal-phosphate attachment site CLI_RS06120 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS06120 IPR005856 Cysteine synthase K/M CLI_RS06120 IPR005859 Cysteine synthase A CLI_RS06125 IPR000515 MetI-like domain CLI_RS06125 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CLI_RS06130 IPR001638 Extracellular solute-binding protein, family 3 CLI_RS06135 IPR000192 Aminotransferase class V domain CLI_RS06135 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS06135 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS06135 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS06135 IPR016454 Cysteine desulfurase, NifS CLI_RS06135 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CLI_RS06140 IPR005232 Conserved hypothetical protein CHP00268 CLI_RS06140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS06140 IPR022310 NAD/GMP synthase CLI_RS06150 IPR004506 tRNA-specific 2-thiouridylase CLI_RS06150 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS06150 IPR023382 Adenine nucleotide alpha hydrolase-like domains CLI_RS06160 IPR001789 Signal transduction response regulator, receiver domain CLI_RS06160 IPR007492 LytTR DNA-binding domain CLI_RS06160 IPR011006 CheY-like superfamily CLI_RS06165 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06165 IPR032834 CLI_RS06165 CLI_RS06170 IPR003439 ABC transporter-like CLI_RS06170 IPR003593 AAA+ ATPase domain CLI_RS06170 IPR017871 ABC transporter, conserved site CLI_RS06170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06175 IPR032688 CLI_RS06175 CLI_RS06180 IPR004129 Glycerophosphoryl diester phosphodiesterase CLI_RS06180 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLI_RS06180 IPR018476 Glycerophosphoryl diester phosphodiesterase, membrane domain CLI_RS06180 IPR030395 CLI_RS06180 CLI_RS06185 IPR024209 Protein of unknown function DUF3787 CLI_RS06190 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CLI_RS06190 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CLI_RS06190 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLI_RS06190 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLI_RS06190 IPR011895 Pyruvate-flavodoxin oxidoreductase CLI_RS06190 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS06190 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS06190 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain CLI_RS06190 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CLI_RS06190 IPR029061 Thiamin diphosphate-binding fold CLI_RS06190 IPR033412 CLI_RS06190 CLI_RS06195 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS06195 IPR009057 Homeodomain-like CLI_RS06195 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS06195 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS06200 IPR006153 Cation/H+ exchanger CLI_RS06205 IPR003846 Uncharacterised protein family UPF0061 CLI_RS06210 IPR002937 Amine oxidase CLI_RS06210 IPR016040 NAD(P)-binding domain CLI_RS06210 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS06215 IPR003313 AraC-type arabinose-binding/dimerisation domain CLI_RS06215 IPR009057 Homeodomain-like CLI_RS06215 IPR018060 DNA binding HTH domain, AraC-type CLI_RS06215 IPR020449 Transcription regulator HTH, AraC- type CLI_RS06220 IPR001927 Sodium:galactoside symporter CLI_RS06220 IPR020846 Major facilitator superfamily domain CLI_RS06225 IPR001139 Glycoside hydrolase, family 30 CLI_RS06225 IPR013780 Glycosyl hydrolase, family 13, all-beta CLI_RS06225 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS06225 IPR017853 Glycoside hydrolase, superfamily CLI_RS06225 IPR033452 CLI_RS06225 CLI_RS06225 IPR033453 CLI_RS06225 CLI_RS06230 IPR000600 ROK CLI_RS06235 IPR001360 Glycoside hydrolase, family 1 CLI_RS06235 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS06235 IPR017853 Glycoside hydrolase, superfamily CLI_RS06235 IPR018120 Glycoside hydrolase, family 1, active site CLI_RS06235 IPR033132 CLI_RS06235 CLI_RS06240 IPR000125 Glycoside hydrolase, family 14A, bacterial CLI_RS06240 IPR001554 Glycoside hydrolase, family 14 CLI_RS06240 IPR002044 Carbohydrate binding module family 20 CLI_RS06240 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS06240 IPR013783 Immunoglobulin-like fold CLI_RS06240 IPR017853 Glycoside hydrolase, superfamily CLI_RS06245 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS06245 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLI_RS06245 IPR002307 Tyrosine-tRNA ligase CLI_RS06245 IPR002942 RNA-binding S4 domain CLI_RS06245 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS06245 IPR024088 Tyrosine-tRNA ligase, bacterial-type CLI_RS06245 IPR024108 Tyrosine-tRNA ligase, bacterial-type, type 2 CLI_RS06250 IPR000524 Transcription regulator HTH, GntR CLI_RS06250 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06255 IPR003439 ABC transporter-like CLI_RS06255 IPR003593 AAA+ ATPase domain CLI_RS06255 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06285 IPR001223 Glycoside hydrolase, family 18, catalytic domain CLI_RS06285 IPR001579 Glycoside hydrolase, chitinase active site CLI_RS06285 IPR003646 SH3-like domain, bacterial-type CLI_RS06285 IPR011583 Chitinase II CLI_RS06285 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS06285 IPR017853 Glycoside hydrolase, superfamily CLI_RS06285 IPR018392 LysM domain CLI_RS06290 IPR000014 PAS domain CLI_RS06290 IPR000160 GGDEF domain CLI_RS06290 IPR029787 Nucleotide cyclase CLI_RS06295 IPR002912 ACT domain CLI_RS06295 IPR004643 Iron-sulphur-dependent L-serine dehydratase beta subunit CLI_RS06295 IPR005131 Serine dehydratase beta chain CLI_RS06295 IPR029009 Allosteric substrate binding domain CLI_RS06300 IPR004642 Serine dehydratase, alpha subunit CLI_RS06300 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS06315 IPR009206 Nucleotidase, putative CLI_RS06315 IPR010708 5'(3')-deoxyribonucleotidase CLI_RS06315 IPR023214 HAD-like domain CLI_RS06320 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS06320 IPR022742 Putative lysophospholipase CLI_RS06320 IPR029058 Alpha/Beta hydrolase fold CLI_RS06325 IPR008257 Renal dipeptidase family CLI_RS06325 IPR032466 CLI_RS06325 CLI_RS06330 IPR006977 Yip1 domain CLI_RS06335 IPR003838 Permease FtsX-like CLI_RS06335 IPR025857 MacB-like periplasmic core domain CLI_RS06345 IPR003439 ABC transporter-like CLI_RS06345 IPR003593 AAA+ ATPase domain CLI_RS06345 IPR017871 ABC transporter, conserved site CLI_RS06345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06350 IPR000515 MetI-like domain CLI_RS06350 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLI_RS06355 IPR000515 MetI-like domain CLI_RS06360 IPR000914 Bacterial extracellular solute-binding protein, family 5 CLI_RS06360 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CLI_RS06360 IPR030678 CLI_RS06360 CLI_RS06365 IPR020256 Spore coat protein CotJA CLI_RS06370 IPR016571 Spore coat assembly protein CotJB CLI_RS06370 IPR024207 Spore coat assembly protein CotJB, domain CLI_RS06375 IPR007760 Manganese catalase CLI_RS06375 IPR009078 Ferritin-like superfamily CLI_RS06375 IPR012347 Ferritin-related CLI_RS06380 IPR018711 Domain of unknown function DUF2233 CLI_RS06385 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS06390 IPR007612 LURP1-like domain CLI_RS06390 IPR025659 Tubby C-terminal-like domain CLI_RS06395 IPR000361 FeS cluster biogenesis CLI_RS06400 IPR008180 Deoxyuridine triphosphate nucleotidohydrolase/Deoxycytidine triphosphate deaminase CLI_RS06400 IPR029054 dUTPase-like CLI_RS06405 IPR012610 Small acid-soluble spore protein, SspH CLI_RS06410 IPR000064 Endopeptidase, NLPC/P60 domain CLI_RS06415 IPR018540 Sporulation stage 0, Spo0E-like regulatory phosphatase CLI_RS06420 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS06420 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS06420 IPR011051 RmlC-like cupin domain CLI_RS06420 IPR013096 Cupin 2, conserved barrel CLI_RS06420 IPR014710 RmlC-like jelly roll fold CLI_RS06425 IPR003352 Phosphotransferase system, EIIC CLI_RS06435 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS06435 IPR009057 Homeodomain-like CLI_RS06435 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS06440 IPR025234 Protein of unknown function DUF4177 CLI_RS06445 IPR003439 ABC transporter-like CLI_RS06445 IPR003593 AAA+ ATPase domain CLI_RS06445 IPR017871 ABC transporter, conserved site CLI_RS06445 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06450 IPR032688 CLI_RS06450 CLI_RS06465 IPR001463 Sodium:alanine symporter CLI_RS06475 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS06475 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS06485 IPR010093 Excisionase/Xis, DNA-binding CLI_RS06490 IPR024425 Domain of unknown function DUF2154 CLI_RS06490 IPR031346 CLI_RS06490 CLI_RS06495 IPR002109 Glutaredoxin CLI_RS06495 IPR011767 Glutaredoxin active site CLI_RS06495 IPR011911 Glutaredoxin-like protein, YruB CLI_RS06495 IPR012336 Thioredoxin-like fold CLI_RS06500 IPR015590 Aldehyde dehydrogenase domain CLI_RS06500 IPR016160 Aldehyde dehydrogenase, cysteine active site CLI_RS06500 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS06500 IPR016162 Aldehyde dehydrogenase, N-terminal CLI_RS06500 IPR016163 Aldehyde dehydrogenase, C-terminal CLI_RS06500 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLI_RS06505 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLI_RS06505 IPR005982 Thioredoxin reductase CLI_RS06505 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLI_RS06505 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS06515 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS06515 IPR016585 Glycine/sarcosine/betaine reductase, component B, fused alpha/beta CLI_RS06520 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family CLI_RS06525 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family CLI_RS06530 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLI_RS06530 IPR005982 Thioredoxin reductase CLI_RS06530 IPR008255 Pyridine nucleotide-disulphide oxidoreductase, class-II, active site CLI_RS06530 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS06535 IPR005746 Thioredoxin CLI_RS06535 IPR012336 Thioredoxin-like fold CLI_RS06535 IPR013766 Thioredoxin domain CLI_RS06535 IPR017937 Thioredoxin, conserved site CLI_RS06540 IPR006812 Glycine reductase complex selenoprotein A CLI_RS06545 IPR006812 Glycine reductase complex selenoprotein A CLI_RS06550 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLI_RS06550 IPR016039 Thiolase-like CLI_RS06550 IPR017236 Glycine/sarcosine/betaine reductase, component C, beta CLI_RS06555 IPR003664 Fatty acid synthesis PlsX protein CLI_RS06555 IPR012116 Glycine/sarcosine/betaine reductase complex, protein C, alpha subunit CLI_RS06555 IPR024084 Isopropylmalate dehydrogenase-like domain CLI_RS06560 IPR003180 Methylpurine-DNA glycosylase (MPG) CLI_RS06560 IPR011034 Formyl transferase, C-terminal-like CLI_RS06565 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLI_RS06565 IPR011639 Restriction modification methylase Eco57I CLI_RS06565 IPR023135 N6 adenine-specific DNA methyltransferase, TaqI class, C-terminal CLI_RS06565 IPR025931 TaqI-like C-terminal specificity domain CLI_RS06565 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS06570 IPR002575 Aminoglycoside phosphotransferase CLI_RS06570 IPR009212 Methylthioribose kinase CLI_RS06570 IPR011009 Protein kinase-like domain CLI_RS06575 IPR000649 Initiation factor 2B-related CLI_RS06575 IPR005251 Methylthioribose-1-phosphate isomerase CLI_RS06575 IPR011559 Initiation factor 2B alpha/beta/delta CLI_RS06575 IPR027363 Methylthioribose-1-phosphate isomerase-like, N-terminal domain CLI_RS06585 IPR001303 Class II aldolase/adducin N-terminal CLI_RS06595 IPR001034 HTH DeoR N-terminal domain CLI_RS06595 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06595 IPR014036 DeoR C-terminal sensor domain CLI_RS06595 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLI_RS06600 IPR010445 Protein of unknown function DUF1049 CLI_RS06605 IPR002524 Cation efflux protein CLI_RS06605 IPR027469 Cation efflux protein transmembrane domain CLI_RS06605 IPR027470 Cation efflux protein cytoplasmic domain CLI_RS06610 IPR007353 Protein of unknown function DUF421 CLI_RS06610 IPR023090 Uncharacterised domain UPF0702, alpha/beta domain CLI_RS06615 IPR025373 Protein of unknown function DUF4363 CLI_RS06620 IPR025689 Sporulation protein YtrH CLI_RS06630 IPR021683 Protein of unknown function DUF3267 CLI_RS06635 IPR014957 IDEAL domain CLI_RS06655 IPR006603 PQ-loop repeat CLI_RS06660 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS06660 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLI_RS06665 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLI_RS06665 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS06665 IPR016166 FAD-binding, type 2 CLI_RS06665 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS06665 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS06670 IPR001041 2Fe-2S ferredoxin-type domain CLI_RS06670 IPR002888 [2Fe-2S]-binding CLI_RS06670 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLI_RS06670 IPR012675 Beta-grasp domain CLI_RS06675 IPR002125 CMP/dCMP deaminase, zinc-binding CLI_RS06675 IPR016192 APOBEC/CMP deaminase, zinc-binding CLI_RS06675 IPR016193 Cytidine deaminase-like CLI_RS06680 IPR000380 DNA topoisomerase, type IA CLI_RS06680 IPR003601 DNA topoisomerase, type IA, domain 2 CLI_RS06680 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLI_RS06680 IPR005738 DNA topoisomerase III CLI_RS06680 IPR006171 Toprim domain CLI_RS06680 IPR013497 DNA topoisomerase, type IA, central CLI_RS06680 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS06680 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS06680 IPR023405 DNA topoisomerase, type IA, core domain CLI_RS06680 IPR023406 DNA topoisomerase, type IA, active site CLI_RS06685 IPR003810 Domain of unknown function DUF204 CLI_RS06685 IPR020846 Major facilitator superfamily domain CLI_RS06685 IPR022929 Putative manganese efflux pump MntP CLI_RS06690 IPR018680 Protein of unknown function DUF2164 CLI_RS06700 IPR001585 Transaldolase CLI_RS06700 IPR004731 Transaldolase 3A/3B CLI_RS06700 IPR013785 Aldolase-type TIM barrel CLI_RS06700 IPR018225 Transaldolase, active site CLI_RS06700 IPR022999 Transaldolase 3B, putative CLI_RS06705 IPR001279 Beta-lactamase-like CLI_RS06705 IPR004613 Ribonuclease J CLI_RS06705 IPR011108 RNA-metabolising metallo-beta-lactamase CLI_RS06705 IPR030854 CLI_RS06705 CLI_RS06710 IPR001463 Sodium:alanine symporter CLI_RS06715 IPR000160 GGDEF domain CLI_RS06715 IPR029787 Nucleotide cyclase CLI_RS06720 IPR002509 Polysaccharide deacetylase CLI_RS06720 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS06720 IPR018763 Protein of unknown function DUF2334 CLI_RS06725 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS06730 IPR018513 Cellulose synthase BcsB, bacterial CLI_RS06735 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS06735 IPR017853 Glycoside hydrolase, superfamily CLI_RS06740 IPR013083 Zinc finger, RING/FYVE/PHD-type CLI_RS06740 IPR025306 Probable zinc-binding domain CLI_RS06745 IPR021260 Protein of unknown function DUF2837 CLI_RS06750 IPR003735 Metal-sensitive transcriptional repressor CLI_RS06755 IPR001757 Cation-transporting P-type ATPase CLI_RS06755 IPR006121 Heavy metal-associated domain, HMA CLI_RS06755 IPR006122 Heavy metal-associated domain, copper ion-binding CLI_RS06755 IPR008250 P-type ATPase, A domain CLI_RS06755 IPR018303 P-type ATPase, phosphorylation site CLI_RS06755 IPR023214 HAD-like domain CLI_RS06755 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS06755 IPR027256 Cation-transporting P-type ATPase, subfamily IB CLI_RS06760 IPR000428 Copper ion binding protein CLI_RS06760 IPR006121 Heavy metal-associated domain, HMA CLI_RS06760 IPR017969 Heavy-metal-associated, conserved site CLI_RS06765 IPR001757 Cation-transporting P-type ATPase CLI_RS06765 IPR008250 P-type ATPase, A domain CLI_RS06765 IPR018303 P-type ATPase, phosphorylation site CLI_RS06765 IPR023214 HAD-like domain CLI_RS06765 IPR023298 P-type ATPase, transmembrane domain CLI_RS06765 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS06770 IPR003439 ABC transporter-like CLI_RS06770 IPR003593 AAA+ ATPase domain CLI_RS06770 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS06770 IPR017871 ABC transporter, conserved site CLI_RS06770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06775 IPR003675 CAAX amino terminal protease CLI_RS06780 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS06785 IPR001789 Signal transduction response regulator, receiver domain CLI_RS06785 IPR001867 Signal transduction response regulator, C-terminal CLI_RS06785 IPR011006 CheY-like superfamily CLI_RS06785 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06790 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06790 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS06790 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS06795 IPR003439 ABC transporter-like CLI_RS06795 IPR003593 AAA+ ATPase domain CLI_RS06795 IPR017871 ABC transporter, conserved site CLI_RS06795 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06800 IPR003838 Permease FtsX-like CLI_RS06805 IPR003797 DegV CLI_RS06810 IPR012349 FMN-binding split barrel CLI_RS06810 IPR024747 Pyridoxamine 5'-phosphate oxidase-related CLI_RS06845 IPR001310 Histidine triad (HIT) protein CLI_RS06845 IPR011146 HIT-like domain CLI_RS06850 IPR007165 Membrane protein of unknown function CLI_RS06855 IPR000045 Prepilin type IV endopeptidase, peptidase domain CLI_RS06855 IPR010627 Peptidase A24A, N-terminal CLI_RS06860 IPR012507 YibE/F-like CLI_RS06865 IPR003148 Regulator of K+ conductance, N-terminal CLI_RS06865 IPR006036 Potassium uptake protein TrkA CLI_RS06865 IPR006037 Regulator of K+ conductance, C-terminal CLI_RS06865 IPR016040 NAD(P)-binding domain CLI_RS06865 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS06870 IPR003445 Cation transporter CLI_RS06870 IPR004772 Potassium uptake protein TrkH family CLI_RS06880 IPR000212 DNA helicase, UvrD/REP type CLI_RS06880 IPR006054 DNA polymerase III, epsilon subunit CLI_RS06880 IPR012337 Ribonuclease H-like domain CLI_RS06880 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS06880 IPR014016 UvrD-like Helicase, ATP-binding domain CLI_RS06880 IPR014017 DNA helicase, UvrD-like, C-terminal CLI_RS06880 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06885 IPR012867 Domain of unknown function DUF1648 CLI_RS06885 IPR014574 Uncharacterised conserved protein UCP032908 CLI_RS06890 IPR000524 Transcription regulator HTH, GntR CLI_RS06890 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06895 IPR011105 Cell wall hydrolase, SleB CLI_RS06895 IPR018392 LysM domain CLI_RS06900 IPR003251 Rubrerythrin CLI_RS06900 IPR004039 Rubredoxin-type fold CLI_RS06900 IPR009078 Ferritin-like superfamily CLI_RS06900 IPR012347 Ferritin-related CLI_RS06905 IPR007253 Putative cell wall binding repeat 2 CLI_RS06905 IPR031841 CLI_RS06905 CLI_RS06910 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS06910 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS06910 IPR003352 Phosphotransferase system, EIIC CLI_RS06910 IPR011055 Duplicated hybrid motif CLI_RS06910 IPR011299 PTS system glucose-specific IIBC component CLI_RS06910 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS06915 IPR001441 Decaprenyl diphosphate synthase-like CLI_RS06925 IPR000944 Transcription regulator Rrf2-like CLI_RS06925 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06925 IPR030489 CLI_RS06925 CLI_RS06930 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CLI_RS06930 IPR010047 Ni-containing CO dehydrogenase CLI_RS06930 IPR011254 Prismane-like CLI_RS06930 IPR016099 Prismane-like, alpha/beta-sandwich CLI_RS06930 IPR016101 CO dehydrogenase, alpha-bundle CLI_RS06935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS06935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS06940 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS06945 IPR001789 Signal transduction response regulator, receiver domain CLI_RS06945 IPR001867 Signal transduction response regulator, C-terminal CLI_RS06945 IPR011006 CheY-like superfamily CLI_RS06945 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06950 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS06950 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS06955 IPR003838 Permease FtsX-like CLI_RS06960 IPR003439 ABC transporter-like CLI_RS06960 IPR003593 AAA+ ATPase domain CLI_RS06960 IPR017871 ABC transporter, conserved site CLI_RS06960 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS06965 IPR000620 Drug/metabolite transporter CLI_RS06975 IPR000595 Cyclic nucleotide-binding domain CLI_RS06975 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS06975 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS06975 IPR014710 RmlC-like jelly roll fold CLI_RS06975 IPR018490 Cyclic nucleotide-binding-like CLI_RS06980 IPR005829 Sugar transporter, conserved site CLI_RS06980 IPR011701 Major facilitator superfamily CLI_RS06980 IPR020846 Major facilitator superfamily domain CLI_RS06985 IPR002491 ABC transporter periplasmic binding domain CLI_RS06990 IPR000522 ABC transporter, permease protein CLI_RS06990 IPR029022 ABC transporter, BtuC-like CLI_RS06995 IPR003439 ABC transporter-like CLI_RS06995 IPR003593 AAA+ ATPase domain CLI_RS06995 IPR017871 ABC transporter, conserved site CLI_RS06995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07005 IPR013283 ABC transporter, ABCE CLI_RS07005 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS07005 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS07010 IPR000281 Helix-turn-helix protein RpiR CLI_RS07010 IPR001347 Sugar isomerase (SIS) CLI_RS07010 IPR009057 Homeodomain-like CLI_RS07010 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07015 IPR001347 Sugar isomerase (SIS) CLI_RS07015 IPR005486 Glucokinase regulatory protein, conserved site CLI_RS07015 IPR005488 N-acetylmuramic acid 6-phosphate etherase MurQ CLI_RS07020 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS07020 IPR003352 Phosphotransferase system, EIIC CLI_RS07020 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS07030 IPR008589 Protein of unknown function DUF871, prokaryotic CLI_RS07030 IPR013785 Aldolase-type TIM barrel CLI_RS07030 IPR017853 Glycoside hydrolase, superfamily CLI_RS07030 IPR029000 Cyclophilin-like domain CLI_RS07035 IPR009467 Putative glycolipid-binding protein CLI_RS07040 IPR003741 Domain of unknown function DUF162 CLI_RS07040 IPR009501 Uncharacterised conserved protein UCP020269 CLI_RS07040 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLI_RS07045 IPR025509 Domain of unknown function DUF4396 CLI_RS07050 IPR007253 Putative cell wall binding repeat 2 CLI_RS07060 IPR012452 Protein of unknown function DUF1657 CLI_RS07065 IPR003660 HAMP linker domain CLI_RS07065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS07065 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS07065 IPR024478 4HB MCP domain CLI_RS07070 IPR000914 Bacterial extracellular solute-binding protein, family 5 CLI_RS07070 IPR023765 Bacterial extracellular solute-binding protein, family 5, conserved site CLI_RS07070 IPR030678 CLI_RS07070 CLI_RS07075 IPR000515 MetI-like domain CLI_RS07080 IPR000515 MetI-like domain CLI_RS07085 IPR003439 ABC transporter-like CLI_RS07085 IPR003593 AAA+ ATPase domain CLI_RS07085 IPR017871 ABC transporter, conserved site CLI_RS07085 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07090 IPR003439 ABC transporter-like CLI_RS07090 IPR003593 AAA+ ATPase domain CLI_RS07090 IPR017871 ABC transporter, conserved site CLI_RS07090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07100 IPR001626 ABC-3 CLI_RS07100 IPR029022 ABC transporter, BtuC-like CLI_RS07105 IPR003439 ABC transporter-like CLI_RS07105 IPR003593 AAA+ ATPase domain CLI_RS07105 IPR017871 ABC transporter, conserved site CLI_RS07105 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07110 IPR006127 Periplasmic solute binding protein family CLI_RS07110 IPR006128 Adhesion lipoprotein CLI_RS07110 IPR006129 Adhesin B CLI_RS07120 IPR001650 Helicase, C-terminal CLI_RS07120 IPR022192 Mitochondrial degradasome RNA helicase subunit, C-terminal domain CLI_RS07120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07125 IPR000160 GGDEF domain CLI_RS07125 IPR029787 Nucleotide cyclase CLI_RS07130 IPR027024 ABC-type uncharacterised transport system, substrate-binding component, TM0202 type CLI_RS07135 IPR000515 MetI-like domain CLI_RS07140 IPR003439 ABC transporter-like CLI_RS07140 IPR003593 AAA+ ATPase domain CLI_RS07140 IPR017871 ABC transporter, conserved site CLI_RS07140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07145 IPR002481 Ferric-uptake regulator CLI_RS07145 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07150 IPR002852 Uncharacterised protein family UPF0251 CLI_RS07150 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07150 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS07155 IPR000834 Peptidase M14, carboxypeptidase A CLI_RS07155 IPR002477 Peptidoglycan binding-like CLI_RS07155 IPR018392 LysM domain CLI_RS07165 IPR001279 Beta-lactamase-like CLI_RS07165 IPR013471 Ribonuclease Z/BN CLI_RS07170 IPR002293 Amino acid/polyamine transporter I CLI_RS07175 IPR011993 Pleckstrin homology-like domain CLI_RS07175 IPR012544 Bacterial Pleckstrin homology domain CLI_RS07180 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07180 IPR011712 Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain CLI_RS07185 IPR000792 Transcription regulator LuxR, C-terminal CLI_RS07185 IPR001789 Signal transduction response regulator, receiver domain CLI_RS07185 IPR011006 CheY-like superfamily CLI_RS07185 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07185 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS07190 IPR003439 ABC transporter-like CLI_RS07190 IPR003593 AAA+ ATPase domain CLI_RS07190 IPR017871 ABC transporter, conserved site CLI_RS07190 IPR025302 Domain of unknown function DUF4162 CLI_RS07190 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07210 IPR000415 Nitroreductase-like CLI_RS07210 IPR029479 Nitroreductase CLI_RS07220 IPR002059 Cold-shock protein, DNA-binding CLI_RS07220 IPR011129 Cold shock protein CLI_RS07220 IPR012156 Cold shock, CspA CLI_RS07220 IPR012340 Nucleic acid-binding, OB-fold CLI_RS07220 IPR019844 Cold-shock conserved site CLI_RS07225 IPR001160 Peptidase M20C, Xaa-His dipeptidase CLI_RS07225 IPR002933 Peptidase M20 CLI_RS07225 IPR011650 Peptidase M20, dimerisation domain CLI_RS07230 IPR011990 Tetratricopeptide-like helical domain CLI_RS07230 IPR019734 Tetratricopeptide repeat CLI_RS07235 IPR004625 Pyridoxal phosphate (active vitamin B6) biosynthesis, pyridoxal kinase CLI_RS07235 IPR013749 Pyridoxamine kinase/Phosphomethylpyrimidine kinase CLI_RS07235 IPR029056 Ribokinase-like CLI_RS07240 IPR002569 Peptide methionine sulphoxide reductase MsrA CLI_RS07240 IPR028427 Peptide methionine sulfoxide reductase CLI_RS07245 IPR003439 ABC transporter-like CLI_RS07245 IPR003593 AAA+ ATPase domain CLI_RS07245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07250 IPR003838 Permease FtsX-like CLI_RS07250 IPR027022 ABC transporter permease protein, BceB-type CLI_RS07255 IPR023346 Lysozyme-like domain CLI_RS07260 IPR001789 Signal transduction response regulator, receiver domain CLI_RS07260 IPR001867 Signal transduction response regulator, C-terminal CLI_RS07260 IPR011006 CheY-like superfamily CLI_RS07260 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07260 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS07265 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS07265 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS07270 IPR003439 ABC transporter-like CLI_RS07270 IPR003593 AAA+ ATPase domain CLI_RS07270 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07275 IPR027022 ABC transporter permease protein, BceB-type CLI_RS07280 IPR021729 Domain of unknown function DUF3298 CLI_RS07280 IPR025303 Domain of unknown function DUF4163 CLI_RS07285 IPR021243 Protein of unknown function DUF2804 CLI_RS07290 IPR004839 Aminotransferase, class I/classII CLI_RS07290 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS07290 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS07290 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS07290 IPR027619 Putative C-S lyase CLI_RS07295 IPR001638 Extracellular solute-binding protein, family 3 CLI_RS07295 IPR018313 Extracellular solute-binding protein, family 3, conserved site CLI_RS07300 IPR000515 MetI-like domain CLI_RS07300 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CLI_RS07305 IPR003439 ABC transporter-like CLI_RS07305 IPR003593 AAA+ ATPase domain CLI_RS07305 IPR017871 ABC transporter, conserved site CLI_RS07305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07305 IPR030679 CLI_RS07305 CLI_RS07310 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS07310 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS07315 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLI_RS07315 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS07315 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLI_RS07320 IPR000086 NUDIX hydrolase domain CLI_RS07320 IPR015797 NUDIX hydrolase domain-like CLI_RS07320 IPR020084 NUDIX hydrolase, conserved site CLI_RS07330 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS07330 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLI_RS07340 IPR018385 C4-dicarboxylate anaerobic carrier-like CLI_RS07345 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CLI_RS07345 IPR006405 Nicotinate phosphoribosyltransferase pncB type CLI_RS07345 IPR007229 Nicotinate phosphoribosyltransferase family CLI_RS07350 IPR001638 Extracellular solute-binding protein, family 3 CLI_RS07350 IPR018313 Extracellular solute-binding protein, family 3, conserved site CLI_RS07355 IPR000515 MetI-like domain CLI_RS07355 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CLI_RS07360 IPR007553 Domain of unknown function DUF523 CLI_RS07365 IPR000212 DNA helicase, UvrD/REP type CLI_RS07365 IPR014016 UvrD-like Helicase, ATP-binding domain CLI_RS07365 IPR014017 DNA helicase, UvrD-like, C-terminal CLI_RS07365 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07375 IPR003494 SHS2 domain inserted in FtsA CLI_RS07375 IPR004753 Cell shape determining protein MreB/Mrl CLI_RS07380 IPR002933 Peptidase M20 CLI_RS07380 IPR011650 Peptidase M20, dimerisation domain CLI_RS07380 IPR017439 Amidohydrolase CLI_RS07385 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS07390 IPR002942 RNA-binding S4 domain CLI_RS07390 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLI_RS07390 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLI_RS07390 IPR006225 Pseudouridine synthase, RluC/RluD CLI_RS07390 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS07395 IPR002797 Polysaccharide biosynthesis protein CLI_RS07395 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLI_RS07395 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS07400 IPR002797 Polysaccharide biosynthesis protein CLI_RS07400 IPR014249 Sporulation stage V protein B CLI_RS07400 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLI_RS07400 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS07405 IPR009078 Ferritin-like superfamily CLI_RS07405 IPR012347 Ferritin-related CLI_RS07415 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS07420 IPR008269 Peptidase S16, Lon C-terminal CLI_RS07420 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS07420 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS07420 IPR027065 Lon protease CLI_RS07430 IPR011096 FTP domain CLI_RS07430 IPR025711 PepSY domain CLI_RS07435 IPR001570 Peptidase M4, C-terminal CLI_RS07435 IPR011096 FTP domain CLI_RS07435 IPR013856 Peptidase M4 domain CLI_RS07435 IPR023612 Peptidase M4 CLI_RS07435 IPR025711 PepSY domain CLI_RS07440 IPR001570 Peptidase M4, C-terminal CLI_RS07440 IPR011096 FTP domain CLI_RS07440 IPR013856 Peptidase M4 domain CLI_RS07440 IPR023612 Peptidase M4 CLI_RS07440 IPR025711 PepSY domain CLI_RS07445 IPR001570 Peptidase M4, C-terminal CLI_RS07445 IPR011096 FTP domain CLI_RS07445 IPR013856 Peptidase M4 domain CLI_RS07445 IPR023612 Peptidase M4 CLI_RS07445 IPR025711 PepSY domain CLI_RS07450 IPR001570 Peptidase M4, C-terminal CLI_RS07450 IPR011096 FTP domain CLI_RS07450 IPR013856 Peptidase M4 domain CLI_RS07450 IPR023612 Peptidase M4 CLI_RS07450 IPR025711 PepSY domain CLI_RS07455 IPR001570 Peptidase M4, C-terminal CLI_RS07455 IPR011096 FTP domain CLI_RS07455 IPR013856 Peptidase M4 domain CLI_RS07455 IPR023612 Peptidase M4 CLI_RS07455 IPR025711 PepSY domain CLI_RS07460 IPR001570 Peptidase M4, C-terminal CLI_RS07460 IPR011096 FTP domain CLI_RS07460 IPR013856 Peptidase M4 domain CLI_RS07460 IPR023612 Peptidase M4 CLI_RS07460 IPR025711 PepSY domain CLI_RS07465 IPR002638 Quinolinate phosphoribosyl transferase, C-terminal CLI_RS07465 IPR004393 Nicotinate-nucleotide pyrophosphorylase CLI_RS07465 IPR013785 Aldolase-type TIM barrel CLI_RS07465 IPR022412 Quinolinate phosphoribosyl transferase, N-terminal CLI_RS07465 IPR027277 Nicotinate-nucleotide pyrophosphorylase/Putative pyrophosphorylase ModD CLI_RS07470 IPR003953 FAD binding domain CLI_RS07470 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS07470 IPR027477 Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain CLI_RS07475 IPR003473 Quinolinate synthetase A CLI_RS07480 IPR007484 Peptidase M28 CLI_RS07485 IPR004254 Hly-III-related CLI_RS07485 IPR005744 HylII CLI_RS07490 IPR004396 Ribosome-binding ATPase YchF/Obg-like ATPase 1 CLI_RS07490 IPR006073 GTP binding domain CLI_RS07490 IPR012675 Beta-grasp domain CLI_RS07490 IPR012676 TGS-like CLI_RS07490 IPR013029 Domain of unknown function DUF933 CLI_RS07490 IPR023192 TGS-like domain CLI_RS07490 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07495 IPR003444 MraZ CLI_RS07495 IPR020603 MraZ domain CLI_RS07500 IPR002903 Ribosomal RNA small subunit methyltransferase H CLI_RS07500 IPR023397 S-adenosyl-L-methionine-dependent methyltransferase, MraW, recognition domain CLI_RS07500 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS07505 IPR011922 Cell division protein FtsL CLI_RS07510 IPR001460 Penicillin-binding protein, transpeptidase CLI_RS07510 IPR005311 Penicillin-binding protein, dimerisation domain CLI_RS07510 IPR005543 PASTA domain CLI_RS07510 IPR011927 Stage V sporulation protein D CLI_RS07510 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS07515 IPR000713 Mur ligase, N-terminal CLI_RS07515 IPR004101 Mur ligase, C-terminal CLI_RS07515 IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase CLI_RS07515 IPR013221 Mur ligase, central CLI_RS07520 IPR000713 Mur ligase, N-terminal CLI_RS07520 IPR004101 Mur ligase, C-terminal CLI_RS07520 IPR005863 UDP-MurNAc-pentapeptide synthetase CLI_RS07520 IPR013221 Mur ligase, central CLI_RS07525 IPR000715 Glycosyl transferase, family 4 CLI_RS07525 IPR003524 Phospho-N-acetylmuramoyl-pentapeptide transferase CLI_RS07525 IPR018480 Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site CLI_RS07530 IPR001182 Cell cycle protein FtsW/RodA CLI_RS07530 IPR013437 Cell division protein FtsW CLI_RS07530 IPR013438 Sporulation stage V, protein E CLI_RS07535 IPR005548 Cell division protein FtsQ/DivIB CLI_RS07535 IPR013685 Polypeptide-transport-associated, FtsQ-type CLI_RS07535 IPR026580 Cell division protein DivIB CLI_RS07540 IPR010273 Protein of unknown function DUF881 CLI_RS07545 IPR009709 Protein of unknown function DUF1290 CLI_RS07550 IPR010273 Protein of unknown function DUF881 CLI_RS07555 IPR001608 Alanine racemase, N-terminal CLI_RS07555 IPR011078 Uncharacterised protein family UPF0001 CLI_RS07555 IPR029066 PLP-binding barrel CLI_RS07560 IPR007561 Cell division protein SepF/SepF-related CLI_RS07560 IPR023052 Cell division protein SepF CLI_RS07565 IPR003425 Uncharacterised protein family Ycf19 CLI_RS07570 IPR002942 RNA-binding S4 domain CLI_RS07575 IPR007793 DivIVA family CLI_RS07575 IPR019933 DivIVA domain CLI_RS07580 IPR016037 3-dehydroquinate synthase AroB CLI_RS07580 IPR030960 CLI_RS07580 CLI_RS07580 IPR030963 CLI_RS07580 CLI_RS07585 IPR000845 Nucleoside phosphorylase domain CLI_RS07585 IPR010049 MTA/SAH nucleosidase CLI_RS07585 IPR018017 Nucleoside phosphorylase CLI_RS07590 IPR006218 DAHP synthetase I/KDSA CLI_RS07590 IPR006268 Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2 CLI_RS07590 IPR013785 Aldolase-type TIM barrel CLI_RS07595 IPR001986 Enolpyruvate transferase domain CLI_RS07595 IPR006264 3-phosphoshikimate 1-carboxyvinyltransferase CLI_RS07595 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLI_RS07595 IPR023193 3-phosphoshikimate 1-carboxyvinyltransferase, conserved site CLI_RS07600 IPR000962 Zinc finger, DksA/TraR C4-type CLI_RS07600 IPR014240 Regulatory protein, YteA family CLI_RS07605 IPR001872 Peptidase A8, signal peptidase II CLI_RS07610 IPR002942 RNA-binding S4 domain CLI_RS07610 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLI_RS07610 IPR006224 Pseudouridine synthase, RluC/RluD, conserved site CLI_RS07610 IPR006225 Pseudouridine synthase, RluC/RluD CLI_RS07610 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS07615 IPR000836 Phosphoribosyltransferase domain CLI_RS07615 IPR023050 Bifunctional protein PyrR CLI_RS07615 IPR029057 Phosphoribosyltransferase-like CLI_RS07620 IPR006042 Xanthine/uracil permease CLI_RS07620 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS07625 IPR004808 AP endonuclease 1 CLI_RS07625 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS07625 IPR020847 AP endonuclease 1, binding site CLI_RS07630 IPR000241 Putative RNA methylase domain CLI_RS07630 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLI_RS07630 IPR004114 THUMP CLI_RS07630 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS07635 IPR001765 Carbonic anhydrase CLI_RS07640 IPR005950 Molybdenum ABC transporter, periplasmic binding protein CLI_RS07645 IPR000515 MetI-like domain CLI_RS07645 IPR011867 Molybdate ABC transporter, permease protein CLI_RS07650 IPR003439 ABC transporter-like CLI_RS07650 IPR003593 AAA+ ATPase domain CLI_RS07650 IPR017871 ABC transporter, conserved site CLI_RS07650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07660 IPR002641 Patatin/Phospholipase A2-related CLI_RS07660 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLI_RS07670 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLI_RS07675 IPR018461 Na+/H+ antiporter, NhaC-like CLI_RS07680 IPR001041 2Fe-2S ferredoxin-type domain CLI_RS07680 IPR012675 Beta-grasp domain CLI_RS07680 IPR027980 Protein of unknown function DUF4445 CLI_RS07685 IPR003495 CobW/HypB/UreG domain CLI_RS07685 IPR011629 Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal CLI_RS07685 IPR012824 Cobalamin (vitamin B12) biosynthesis CobW CLI_RS07685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07690 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLI_RS07695 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS07695 IPR006158 Cobalamin (vitamin B12)-binding domain CLI_RS07695 IPR012741 Methyltransferase cognate corrinoid protein CLI_RS07700 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLI_RS07700 IPR006360 Methyltransferase MtaA/CmuA CLI_RS07705 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLI_RS07710 IPR003439 ABC transporter-like CLI_RS07710 IPR003593 AAA+ ATPase domain CLI_RS07710 IPR017871 ABC transporter, conserved site CLI_RS07710 IPR018449 NIL domain CLI_RS07710 IPR026253 Methionine import ATP-binding protein MetN CLI_RS07710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07715 IPR000515 MetI-like domain CLI_RS07720 IPR004872 Lipoprotein NlpA family CLI_RS07725 IPR003409 MORN motif CLI_RS07730 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLI_RS07730 IPR013785 Aldolase-type TIM barrel CLI_RS07735 IPR004618 Aspartate--ammonia ligase CLI_RS07740 IPR005805 Rieske iron-sulphur protein, C-terminal CLI_RS07740 IPR006076 FAD dependent oxidoreductase CLI_RS07740 IPR017941 Rieske [2Fe-2S] iron-sulphur domain CLI_RS07740 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS07745 IPR000380 DNA topoisomerase, type IA CLI_RS07745 IPR003601 DNA topoisomerase, type IA, domain 2 CLI_RS07745 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLI_RS07745 IPR006171 Toprim domain CLI_RS07745 IPR013497 DNA topoisomerase, type IA, central CLI_RS07745 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS07745 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS07745 IPR023405 DNA topoisomerase, type IA, core domain CLI_RS07745 IPR023406 DNA topoisomerase, type IA, active site CLI_RS07750 IPR000432 DNA mismatch repair protein MutS, C-terminal CLI_RS07750 IPR007696 DNA mismatch repair protein MutS, core CLI_RS07750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07755 IPR001395 Aldo/keto reductase CLI_RS07755 IPR009051 Alpha-helical ferredoxin CLI_RS07755 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS07755 IPR023210 NADP-dependent oxidoreductase domain CLI_RS07760 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLI_RS07765 IPR003439 ABC transporter-like CLI_RS07765 IPR003593 AAA+ ATPase domain CLI_RS07765 IPR017871 ABC transporter, conserved site CLI_RS07765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07770 IPR003838 Permease FtsX-like CLI_RS07775 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS07775 IPR009057 Homeodomain-like CLI_RS07775 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS07775 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS07775 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLI_RS07780 IPR007553 Domain of unknown function DUF523 CLI_RS07785 IPR003439 ABC transporter-like CLI_RS07785 IPR003593 AAA+ ATPase domain CLI_RS07785 IPR008995 Molybdate/tungstate binding, C-terminal CLI_RS07785 IPR012340 Nucleic acid-binding, OB-fold CLI_RS07785 IPR017871 ABC transporter, conserved site CLI_RS07785 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07790 IPR000515 MetI-like domain CLI_RS07795 IPR000515 MetI-like domain CLI_RS07805 IPR001236 Lactate/malate dehydrogenase, N-terminal CLI_RS07805 IPR001557 L-lactate/malate dehydrogenase CLI_RS07805 IPR011304 L-lactate dehydrogenase CLI_RS07805 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLI_RS07805 IPR016040 NAD(P)-binding domain CLI_RS07805 IPR018177 L-lactate dehydrogenase, active site CLI_RS07805 IPR022383 Lactate/malate dehydrogenase, C-terminal CLI_RS07810 IPR000524 Transcription regulator HTH, GntR CLI_RS07810 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS07810 IPR011711 GntR, C-terminal CLI_RS07810 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07815 IPR010181 CGCAxxGCC motif CLI_RS07815 IPR011031 Multihaem cytochrome CLI_RS07820 IPR004695 Voltage-dependent anion channel CLI_RS07830 IPR000014 PAS domain CLI_RS07830 IPR000160 GGDEF domain CLI_RS07830 IPR003607 HD/PDEase domain CLI_RS07830 IPR006674 HD domain CLI_RS07830 IPR029787 Nucleotide cyclase CLI_RS07840 IPR003660 HAMP linker domain CLI_RS07840 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS07840 IPR033479 CLI_RS07840 CLI_RS07845 IPR000835 MarR-type HTH domain CLI_RS07845 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07850 IPR026816 Flavodoxin domain CLI_RS07850 IPR029039 Flavoprotein-like CLI_RS07855 IPR002577 Helix-turn-helix, HxlR type CLI_RS07855 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07860 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS07860 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS07865 IPR001497 Methylated-DNA-[protein]-cysteine S-methyltransferase, active site CLI_RS07865 IPR008332 Methylguanine DNA methyltransferase, ribonuclease-like domain CLI_RS07865 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07865 IPR014048 Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding CLI_RS07865 IPR023546 Methylated-DNA--protein-cysteine methyltransferase CLI_RS07870 IPR009057 Homeodomain-like CLI_RS07870 IPR009215 TIM-barrel domain, IGPS-like CLI_RS07870 IPR013785 Aldolase-type TIM barrel CLI_RS07870 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLI_RS07870 IPR018060 DNA binding HTH domain, AraC-type CLI_RS07875 IPR008322 Uncharacterised protein family UPF0261 CLI_RS07880 IPR009215 TIM-barrel domain, IGPS-like CLI_RS07880 IPR013785 Aldolase-type TIM barrel CLI_RS07880 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLI_RS07885 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS07885 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS07885 IPR011990 Tetratricopeptide-like helical domain CLI_RS07890 IPR001757 Cation-transporting P-type ATPase CLI_RS07890 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS07890 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS07890 IPR008250 P-type ATPase, A domain CLI_RS07890 IPR018303 P-type ATPase, phosphorylation site CLI_RS07890 IPR023214 HAD-like domain CLI_RS07890 IPR023298 P-type ATPase, transmembrane domain CLI_RS07890 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS07895 IPR002524 Cation efflux protein CLI_RS07895 IPR027469 Cation efflux protein transmembrane domain CLI_RS07895 IPR027470 Cation efflux protein cytoplasmic domain CLI_RS07900 IPR000109 Proton-dependent oligopeptide transporter family CLI_RS07900 IPR005279 Amino acid/peptide transporter family CLI_RS07900 IPR020846 Major facilitator superfamily domain CLI_RS07905 IPR001367 Iron dependent repressor-like, metal binding and dimerisation domain CLI_RS07905 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07905 IPR022687 Iron dependent repressor, N-terminal CLI_RS07905 IPR022689 Iron dependent repressor, diptheria toxin type CLI_RS07915 IPR006675 Uncharacterised domain HDIG CLI_RS07915 IPR013976 Metal-dependent hydrolase HDOD CLI_RS07925 IPR001757 Cation-transporting P-type ATPase CLI_RS07925 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS07925 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS07925 IPR008250 P-type ATPase, A domain CLI_RS07925 IPR018303 P-type ATPase, phosphorylation site CLI_RS07925 IPR023214 HAD-like domain CLI_RS07925 IPR023298 P-type ATPase, transmembrane domain CLI_RS07925 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS07930 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS07935 IPR006750 Protein of unknown function DUF606 CLI_RS07940 IPR006750 Protein of unknown function DUF606 CLI_RS07945 IPR000595 Cyclic nucleotide-binding domain CLI_RS07945 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07945 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS07945 IPR014710 RmlC-like jelly roll fold CLI_RS07945 IPR018490 Cyclic nucleotide-binding-like CLI_RS07950 IPR003439 ABC transporter-like CLI_RS07950 IPR003593 AAA+ ATPase domain CLI_RS07950 IPR017871 ABC transporter, conserved site CLI_RS07950 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07955 IPR000412 ABC-2 transporter CLI_RS07955 IPR013525 ABC-2 type transporter CLI_RS07965 IPR000792 Transcription regulator LuxR, C-terminal CLI_RS07965 IPR002182 NB-ARC CLI_RS07965 IPR011990 Tetratricopeptide-like helical domain CLI_RS07965 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07965 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS07965 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS07970 IPR010499 Bacterial transcription activator, effector binding CLI_RS07970 IPR011256 Regulatory factor, effector binding domain CLI_RS07970 IPR025868 Putative zinc ribbon domain CLI_RS07970 IPR029441 Integron-associated effector binding protein CLI_RS07975 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS07975 IPR013196 Helix-turn-helix, type 11 CLI_RS07975 IPR026881 WYL domain CLI_RS07975 IPR028349 Protein PafB/PafC CLI_RS07980 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS07985 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS07985 IPR008275 CoA enzyme activase CLI_RS07990 IPR007115 6-pyruvoyl tetrahydropterin synthase/QueD family protein CLI_RS07995 IPR007197 Radical SAM CLI_RS07995 IPR013785 Aldolase-type TIM barrel CLI_RS07995 IPR023868 7-carboxy-7-deazaguanine synthase, Clostridial form CLI_RS07995 IPR024924 7-carboxy-7-deazaguanine synthase-like CLI_RS08000 IPR001474 GTP cyclohydrolase I CLI_RS08000 IPR018234 GTP cyclohydrolase I, conserved site CLI_RS08000 IPR020602 GTP cyclohydrolase I domain CLI_RS08005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS08005 IPR018317 Queuosine biosynthesis protein QueC CLI_RS08010 IPR003675 CAAX amino terminal protease CLI_RS08015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS08015 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS08020 IPR010380 Protein of unknown function DUF975 CLI_RS08030 IPR007324 Sugar-binding domain, putative CLI_RS08030 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS08030 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08030 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS08035 IPR002915 DeoC/FbaB/ lacD aldolase CLI_RS08035 IPR011343 Deoxyribose-phosphate aldolase CLI_RS08035 IPR013785 Aldolase-type TIM barrel CLI_RS08035 IPR028581 Deoxyribose-phosphate aldolase type I CLI_RS08040 IPR002139 Ribokinase CLI_RS08040 IPR011611 Carbohydrate kinase PfkB CLI_RS08040 IPR011877 Ribokinase, bacterial CLI_RS08040 IPR029056 Ribokinase-like CLI_RS08045 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CLI_RS08045 IPR004517 ATP phosphoribosyltransferase regulatory subunit CLI_RS08050 IPR001348 ATP phosphoribosyltransferase HisG CLI_RS08050 IPR013820 ATP phosphoribosyltransferase, catalytic domain CLI_RS08050 IPR018198 ATP phosphoribosyltransferase, conserved site CLI_RS08050 IPR024893 ATP phosphoribosyltransferase HisG, short form CLI_RS08055 IPR001692 Histidinol dehydrogenase, conserved site CLI_RS08055 IPR012131 Histidinol dehydrogenase CLI_RS08055 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS08055 IPR022695 Histidinol dehydrogenase, monofunctional CLI_RS08060 IPR000807 Imidazoleglycerol-phosphate dehydratase CLI_RS08060 IPR020565 Imidazoleglycerol-phosphate dehydratase, conserved site CLI_RS08060 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08065 IPR010139 Imidazole glycerol phosphate synthase, subunit H CLI_RS08065 IPR017926 Glutamine amidotransferase CLI_RS08065 IPR029062 Class I glutamine amidotransferase-like CLI_RS08070 IPR006062 Histidine biosynthesis CLI_RS08070 IPR006063 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase HisA CLI_RS08070 IPR011060 Ribulose-phosphate binding barrel CLI_RS08070 IPR013785 Aldolase-type TIM barrel CLI_RS08070 IPR023016 Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase CLI_RS08075 IPR001917 Aminotransferase, class-II, pyridoxal-phosphate binding site CLI_RS08075 IPR004839 Aminotransferase, class I/classII CLI_RS08075 IPR005861 Histidinol-phosphate aminotransferase family CLI_RS08075 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS08075 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS08075 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08080 IPR004651 Histidine biosynthesis, HisF CLI_RS08080 IPR006062 Histidine biosynthesis CLI_RS08080 IPR011060 Ribulose-phosphate binding barrel CLI_RS08080 IPR013785 Aldolase-type TIM barrel CLI_RS08085 IPR002496 Phosphoribosyl-AMP cyclohydrolase domain CLI_RS08085 IPR026660 Phosphoribosyl-AMP cyclohydrolase CLI_RS08090 IPR008179 Phosphoribosyl-ATP pyrophosphohydrolase CLI_RS08090 IPR021130 Phosphoribosyl-ATP pyrophosphohydrolase-like CLI_RS08095 IPR007272 Sulphur transport domain CLI_RS08100 IPR001455 TusA-like domain CLI_RS08105 IPR007272 Sulphur transport domain CLI_RS08110 IPR000847 Transcription regulator HTH, LysR CLI_RS08110 IPR005119 LysR, substrate-binding CLI_RS08110 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08115 IPR001463 Sodium:alanine symporter CLI_RS08120 IPR001763 Rhodanese-like domain CLI_RS08120 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLI_RS08120 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLI_RS08120 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS08125 IPR007272 Sulphur transport domain CLI_RS08130 IPR003439 ABC transporter-like CLI_RS08130 IPR003593 AAA+ ATPase domain CLI_RS08130 IPR022501 Gallidermin ABC transporter, ATP-binding subunit CLI_RS08130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08135 IPR021205 Lantibiotic ABC transporter permease subunit, SpaE/MutE CLI_RS08140 IPR022294 Lantibiotic protection ABC transporter permease subunit, MutG family CLI_RS08140 IPR032688 CLI_RS08140 CLI_RS08145 IPR001789 Signal transduction response regulator, receiver domain CLI_RS08145 IPR001867 Signal transduction response regulator, C-terminal CLI_RS08145 IPR011006 CheY-like superfamily CLI_RS08145 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08145 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS08150 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08150 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS08150 IPR008358 Signal transduction histidine kinase/phosphatase, lantibiotic regulatory protein MprB CLI_RS08155 IPR003876 Arginine deiminase CLI_RS08155 IPR033199 CLI_RS08155 CLI_RS08160 IPR002293 Amino acid/polyamine transporter I CLI_RS08160 IPR004754 Amino acid antiporter CLI_RS08170 IPR014975 Protein of unknown function DUF1836 CLI_RS08175 IPR003607 HD/PDEase domain CLI_RS08175 IPR006674 HD domain CLI_RS08190 IPR024307 YmaF CLI_RS08195 IPR000330 SNF2-related CLI_RS08195 IPR001650 Helicase, C-terminal CLI_RS08195 IPR013663 Helicase, SWF/SNF/SWI type, bacterial CLI_RS08195 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS08195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08200 IPR007685 RelA/SpoT CLI_RS08205 IPR012347 Ferritin-related CLI_RS08205 IPR019052 Domain of unknown function DUF2383 CLI_RS08210 IPR009057 Homeodomain-like CLI_RS08210 IPR018060 DNA binding HTH domain, AraC-type CLI_RS08215 IPR003439 ABC transporter-like CLI_RS08215 IPR003593 AAA+ ATPase domain CLI_RS08215 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS08215 IPR017871 ABC transporter, conserved site CLI_RS08215 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08220 IPR003439 ABC transporter-like CLI_RS08220 IPR003593 AAA+ ATPase domain CLI_RS08220 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS08220 IPR017871 ABC transporter, conserved site CLI_RS08220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08225 IPR000843 Transcription regulator HTH, LacI CLI_RS08225 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS08225 IPR028082 Periplasmic binding protein-like I CLI_RS08230 IPR000600 ROK CLI_RS08235 IPR006046 Alpha amylase CLI_RS08235 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLI_RS08235 IPR013780 Glycosyl hydrolase, family 13, all-beta CLI_RS08235 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS08235 IPR015902 Glycoside hydrolase, family 13 CLI_RS08235 IPR017853 Glycoside hydrolase, superfamily CLI_RS08235 IPR032091 CLI_RS08235 CLI_RS08240 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS08240 IPR003352 Phosphotransferase system, EIIC CLI_RS08240 IPR011300 Phosphotransferase system, IIBC component CLI_RS08240 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS08245 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS08250 IPR003810 Domain of unknown function DUF204 CLI_RS08250 IPR014205 Sporulation protein YtaF CLI_RS08255 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS08255 IPR004323 Divalent ion tolerance protein, CutA CLI_RS08270 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08270 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS08270 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS08275 IPR001789 Signal transduction response regulator, receiver domain CLI_RS08275 IPR001867 Signal transduction response regulator, C-terminal CLI_RS08275 IPR011006 CheY-like superfamily CLI_RS08275 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08275 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS08285 IPR011701 Major facilitator superfamily CLI_RS08285 IPR020846 Major facilitator superfamily domain CLI_RS08290 IPR007382 Uncharacterised protein family UPF0756, transmembrame CLI_RS08295 IPR000150 Cof protein CLI_RS08295 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLI_RS08295 IPR023214 HAD-like domain CLI_RS08300 IPR001034 HTH DeoR N-terminal domain CLI_RS08300 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08300 IPR014036 DeoR C-terminal sensor domain CLI_RS08300 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLI_RS08305 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS08305 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08305 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS08305 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS08305 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS08305 IPR014284 RNA polymerase sigma-70 like domain CLI_RS08310 IPR024419 Protein of unknown function YvrJ CLI_RS08315 IPR000601 PKD domain CLI_RS08315 IPR002169 Peptidase M9A/M9B, collagenase, bacterial CLI_RS08315 IPR007280 Peptidase, C-terminal, archaeal/bacterial CLI_RS08315 IPR013661 Peptidase M9, collagenase, N-terminal domain CLI_RS08315 IPR022409 PKD/Chitinase domain CLI_RS08320 IPR003171 Methylenetetrahydrofolate reductase CLI_RS08320 IPR004620 5,10-methylenetetrahydrofolate reductase CLI_RS08320 IPR029041 FAD-linked oxidoreductase-like CLI_RS08325 IPR004223 Vitamin B12-dependent methionine synthase, activation domain CLI_RS08325 IPR017342 S-adenosyl-L-methionine dependent methionine synthase, predicted CLI_RS08330 IPR000489 Pterin-binding CLI_RS08330 IPR003726 Homocysteine S-methyltransferase CLI_RS08330 IPR003759 Cobalamin (vitamin B12)-binding module, cap domain CLI_RS08330 IPR006158 Cobalamin (vitamin B12)-binding domain CLI_RS08330 IPR011005 Dihydropteroate synthase-like CLI_RS08330 IPR017215 5-methyltetrahydrofolate-homocysteine S-methyltransferase, bacterial CLI_RS08335 IPR029045 ClpP/crotonase-like domain CLI_RS08340 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS08340 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08340 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS08340 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS08340 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS08340 IPR014284 RNA polymerase sigma-70 like domain CLI_RS08345 IPR025436 Domain of unknown function DUF4179 CLI_RS08350 IPR000014 PAS domain CLI_RS08350 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS08350 IPR002197 DNA binding HTH domain, Fis-type CLI_RS08350 IPR003593 AAA+ ATPase domain CLI_RS08350 IPR009057 Homeodomain-like CLI_RS08350 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS08350 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS08350 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08350 IPR029016 GAF domain-like CLI_RS08355 IPR011719 Conserved hypothetical protein CHP02058 CLI_RS08355 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLI_RS08360 IPR001017 Dehydrogenase, E1 component CLI_RS08360 IPR017597 Pyruvate dehydrogenase (acetyl-transferring) E1 component, alpha subunit, subgroup y CLI_RS08360 IPR029061 Thiamin diphosphate-binding fold CLI_RS08365 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS08365 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLI_RS08365 IPR029061 Thiamin diphosphate-binding fold CLI_RS08365 IPR033247 CLI_RS08365 CLI_RS08365 IPR033248 CLI_RS08365 CLI_RS08370 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CLI_RS08370 IPR011391 Acetoin catabolism kinase AcoX CLI_RS08370 IPR016064 ATP-NAD kinase-like domain CLI_RS08370 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CLI_RS08375 IPR000089 Biotin/lipoyl attachment CLI_RS08375 IPR001078 2-oxoacid dehydrogenase acyltransferase, catalytic domain CLI_RS08375 IPR004167 E3 binding CLI_RS08375 IPR011053 Single hybrid motif CLI_RS08375 IPR023213 Chloramphenicol acetyltransferase-like domain CLI_RS08380 IPR004099 Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain CLI_RS08380 IPR006258 Dihydrolipoamide dehydrogenase CLI_RS08380 IPR012999 Pyridine nucleotide-disulphide oxidoreductase, class I, active site CLI_RS08380 IPR016156 FAD/NAD-linked reductase, dimerisation domain CLI_RS08380 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS08385 IPR004143 Biotin/lipoate A/B protein ligase CLI_RS08385 IPR004562 Lipoyltransferase/lipoate-protein ligase CLI_RS08385 IPR019491 Lipoate protein ligase, C-terminal CLI_RS08390 IPR000644 CBS domain CLI_RS08390 IPR003439 ABC transporter-like CLI_RS08390 IPR003593 AAA+ ATPase domain CLI_RS08390 IPR005892 Glycine betaine transport ATP-binding subunit CLI_RS08390 IPR013785 Aldolase-type TIM barrel CLI_RS08390 IPR017871 ABC transporter, conserved site CLI_RS08390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08395 IPR000515 MetI-like domain CLI_RS08395 IPR007210 ABC-type glycine betaine transport system, substrate-binding domain CLI_RS08400 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS08400 IPR004450 Threonine synthase-like CLI_RS08400 IPR029144 Threonine synthase, N-terminal CLI_RS08405 IPR000870 Homoserine kinase CLI_RS08405 IPR006203 GHMP kinase, ATP-binding, conserved site CLI_RS08405 IPR006204 GHMP kinase N-terminal domain CLI_RS08405 IPR013750 GHMP kinase, C-terminal domain CLI_RS08405 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS08405 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08410 IPR001048 Aspartate/glutamate/uridylate kinase CLI_RS08410 IPR001341 Aspartate kinase domain CLI_RS08410 IPR005260 Aspartate kinase, monofunctional class CLI_RS08410 IPR018042 Aspartate kinase, conserved site CLI_RS08415 IPR001342 Homoserine dehydrogenase, catalytic CLI_RS08415 IPR002912 ACT domain CLI_RS08415 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLI_RS08415 IPR016040 NAD(P)-binding domain CLI_RS08415 IPR016204 Homoserine dehydrogenase CLI_RS08415 IPR019811 Homoserine dehydrogenase, conserved site CLI_RS08420 IPR000014 PAS domain CLI_RS08420 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS08420 IPR002197 DNA binding HTH domain, Fis-type CLI_RS08420 IPR003593 AAA+ ATPase domain CLI_RS08420 IPR009057 Homeodomain-like CLI_RS08420 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS08420 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS08420 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS08420 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08420 IPR029016 GAF domain-like CLI_RS08425 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS08425 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLI_RS08430 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit CLI_RS08430 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS08430 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLI_RS08435 IPR006004 Glutamate synthase (NADPH), homotetrameric CLI_RS08435 IPR009051 Alpha-helical ferredoxin CLI_RS08435 IPR016040 NAD(P)-binding domain CLI_RS08435 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS08435 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS08440 IPR000014 PAS domain CLI_RS08440 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS08440 IPR002197 DNA binding HTH domain, Fis-type CLI_RS08440 IPR003593 AAA+ ATPase domain CLI_RS08440 IPR009057 Homeodomain-like CLI_RS08440 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS08440 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS08440 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS08440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08440 IPR029016 GAF domain-like CLI_RS08445 IPR001646 Pentapeptide repeat CLI_RS08450 IPR003343 Bacterial Ig-like, group 2 CLI_RS08450 IPR008964 Invasin/intimin cell-adhesion CLI_RS08450 IPR011050 Pectin lyase fold/virulence factor CLI_RS08450 IPR012334 Pectin lyase fold CLI_RS08465 IPR010879 Domain of unknown function DUF1508 CLI_RS08470 IPR002477 Peptidoglycan binding-like CLI_RS08470 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS08485 IPR012312 Haemerythrin/HHE cation-binding motif CLI_RS08490 IPR000821 Alanine racemase CLI_RS08490 IPR001608 Alanine racemase, N-terminal CLI_RS08490 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLI_RS08490 IPR011079 Alanine racemase, C-terminal CLI_RS08490 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CLI_RS08490 IPR029066 PLP-binding barrel CLI_RS08495 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS08495 IPR025991 Chemoreceptor zinc-binding domain CLI_RS08500 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS08505 IPR010380 Protein of unknown function DUF975 CLI_RS08510 IPR002347 Glucose/ribitol dehydrogenase CLI_RS08510 IPR016040 NAD(P)-binding domain CLI_RS08510 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLI_RS08515 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS08515 IPR029151 Periplasmic sensor domain-like CLI_RS08515 IPR033479 CLI_RS08515 CLI_RS08520 IPR032774 CLI_RS08520 CLI_RS08530 IPR000330 SNF2-related CLI_RS08530 IPR001650 Helicase, C-terminal CLI_RS08530 IPR013663 Helicase, SWF/SNF/SWI type, bacterial CLI_RS08530 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS08530 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08535 IPR004638 Drug resistance transporter EmrB/QacA subfamily CLI_RS08535 IPR011701 Major facilitator superfamily CLI_RS08535 IPR020846 Major facilitator superfamily domain CLI_RS08540 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS08540 IPR009057 Homeodomain-like CLI_RS08540 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS08555 IPR003439 ABC transporter-like CLI_RS08555 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08560 IPR012337 Ribonuclease H-like domain CLI_RS08560 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS08565 IPR009343 Protein of unknown function DUF1002 CLI_RS08570 IPR013216 Methyltransferase type 11 CLI_RS08570 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS08575 IPR008978 HSP20-like chaperone CLI_RS08575 IPR031107 CLI_RS08575 CLI_RS08580 IPR011701 Major facilitator superfamily CLI_RS08580 IPR020846 Major facilitator superfamily domain CLI_RS08585 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS08585 IPR009057 Homeodomain-like CLI_RS08585 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS08585 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS08595 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLI_RS08595 IPR011611 Carbohydrate kinase PfkB CLI_RS08595 IPR017583 Tagatose/fructose phosphokinase CLI_RS08595 IPR022463 Fructose 1-phosphate kinase CLI_RS08595 IPR023314 Tagatose-6-phosphate kinase/1-phosphofructokinase N-terminal domain CLI_RS08595 IPR029056 Ribokinase-like CLI_RS08600 IPR000109 Proton-dependent oligopeptide transporter family CLI_RS08600 IPR005279 Amino acid/peptide transporter family CLI_RS08600 IPR020846 Major facilitator superfamily domain CLI_RS08615 IPR000064 Endopeptidase, NLPC/P60 domain CLI_RS08615 IPR024301 Putative amidase domain CLI_RS08625 IPR002173 Carbohydrate/puine kinase, PfkB, conserved site CLI_RS08625 IPR011611 Carbohydrate kinase PfkB CLI_RS08625 IPR029056 Ribokinase-like CLI_RS08630 IPR014044 CAP domain CLI_RS08630 IPR014248 Spore coat assembly protein SafA CLI_RS08630 IPR018392 LysM domain CLI_RS08640 IPR002059 Cold-shock protein, DNA-binding CLI_RS08640 IPR011129 Cold shock protein CLI_RS08640 IPR012156 Cold shock, CspA CLI_RS08640 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08645 IPR003660 HAMP linker domain CLI_RS08645 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS08645 IPR029151 Periplasmic sensor domain-like CLI_RS08645 IPR033479 CLI_RS08645 CLI_RS08650 IPR003439 ABC transporter-like CLI_RS08650 IPR003593 AAA+ ATPase domain CLI_RS08650 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08650 IPR032781 CLI_RS08650 CLI_RS08655 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLI_RS08660 IPR005117 Nitrite/Sulfite reductase ferredoxin-like domain CLI_RS08660 IPR006066 Nitrite/sulphite reductase iron-sulphur/siroheam-binding site CLI_RS08660 IPR006067 Nitrite/sulphite reductase 4Fe-4S domain CLI_RS08660 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS08660 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08665 IPR001789 Signal transduction response regulator, receiver domain CLI_RS08665 IPR002545 CheW-like protein CLI_RS08665 IPR011006 CheY-like superfamily CLI_RS08665 IPR024181 Chemotaxis response regulator CheV CLI_RS08670 IPR001650 Helicase, C-terminal CLI_RS08670 IPR011545 DEAD/DEAH box helicase domain CLI_RS08670 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS08670 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08675 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS08675 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08675 IPR014464 Conserved virulence factor B CLI_RS08675 IPR022967 RNA-binding domain, S1 CLI_RS08680 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLI_RS08680 IPR001650 Helicase, C-terminal CLI_RS08680 IPR005580 DbpA, RNA-binding CLI_RS08680 IPR011545 DEAD/DEAH box helicase domain CLI_RS08680 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS08680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08680 IPR028619 ATP-dependent RNA helicase DbpA CLI_RS08685 IPR011081 Bacterial Ig-related CLI_RS08685 IPR032485 CLI_RS08685 CLI_RS08690 IPR001611 Leucine-rich repeat CLI_RS08690 IPR003591 Leucine-rich repeat, typical subtype CLI_RS08690 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS08690 IPR011081 Bacterial Ig-related CLI_RS08690 IPR025875 Leucine rich repeat 4 CLI_RS08690 IPR032485 CLI_RS08690 CLI_RS08690 IPR032675 CLI_RS08690 CLI_RS08695 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLI_RS08700 IPR001519 Ferritin CLI_RS08700 IPR008331 Ferritin/DPS protein domain CLI_RS08700 IPR009078 Ferritin-like superfamily CLI_RS08700 IPR012347 Ferritin-related CLI_RS08710 IPR001789 Signal transduction response regulator, receiver domain CLI_RS08710 IPR011006 CheY-like superfamily CLI_RS08710 IPR028051 Chemotaxis phosphatase CheX-like domain CLI_RS08710 IPR028976 CheC-like domain CLI_RS08715 IPR028051 Chemotaxis phosphatase CheX-like domain CLI_RS08715 IPR028976 CheC-like domain CLI_RS08720 IPR011642 Nucleoside recognition Gate CLI_RS08725 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS08725 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CLI_RS08730 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS08730 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CLI_RS08740 IPR002104 Integrase, catalytic CLI_RS08740 IPR004107 Integrase, SAM-like, N-terminal CLI_RS08740 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLI_RS08740 IPR013762 Integrase-like, catalytic core CLI_RS08740 IPR023009 Tyrosine recombinase XerC/XerD CLI_RS08740 IPR023109 Integrase/recombinase, N-terminal CLI_RS08750 IPR006197 Peptidase S24, LexA-like CLI_RS08750 IPR006199 LexA repressor, DNA-binding domain CLI_RS08750 IPR006200 LexA repressor CLI_RS08750 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08750 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS08750 IPR019759 Peptidase S24/S26A/S26B CLI_RS08750 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS08755 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLI_RS08755 IPR009651 Putative methionine gamma-lyase CLI_RS08755 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS08755 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08760 IPR005001 Host factor Hfq CLI_RS08760 IPR010920 Like-Sm (LSM) domain CLI_RS08765 IPR018022 tRNA delta(2)-isopentenylpyrophosphate transferase CLI_RS08765 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08770 IPR002099 DNA mismatch repair protein family CLI_RS08770 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS08770 IPR013507 DNA mismatch repair protein, C-terminal CLI_RS08770 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS08770 IPR014762 DNA mismatch repair, conserved site CLI_RS08770 IPR014790 MutL, C-terminal, dimerisation CLI_RS08770 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS08770 IPR020667 DNA mismatch repair protein, MutL CLI_RS08775 IPR000432 DNA mismatch repair protein MutS, C-terminal CLI_RS08775 IPR005748 DNA mismatch repair protein MutS, type 1 CLI_RS08775 IPR007695 DNA mismatch repair protein MutS-like, N-terminal CLI_RS08775 IPR007696 DNA mismatch repair protein MutS, core CLI_RS08775 IPR007860 DNA mismatch repair protein MutS, connector domain CLI_RS08775 IPR007861 DNA mismatch repair protein MutS, clamp CLI_RS08775 IPR016151 DNA mismatch repair protein MutS, N-terminal CLI_RS08775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08780 IPR002792 TRAM domain CLI_RS08780 IPR005839 Methylthiotransferase CLI_RS08780 IPR006463 tRNA-i(6)A37 modification enzyme MiaB CLI_RS08780 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS08780 IPR007197 Radical SAM CLI_RS08780 IPR013848 Methylthiotransferase, N-terminal CLI_RS08780 IPR020612 Methylthiotransferase, conserved site CLI_RS08780 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS08780 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS08785 IPR004839 Aminotransferase, class I/classII CLI_RS08785 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS08785 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS08785 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08795 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLI_RS08795 IPR004839 Aminotransferase, class I/classII CLI_RS08795 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS08795 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS08795 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS08800 IPR000182 GNAT domain CLI_RS08800 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08805 IPR011009 Protein kinase-like domain CLI_RS08805 IPR014255 Spore coat protein CotS CLI_RS08810 IPR000110 Ribosomal protein S1 CLI_RS08810 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS08810 IPR003451 4-hydroxy-3-methylbut-2-enyl diphosphate reductase CLI_RS08810 IPR012340 Nucleic acid-binding, OB-fold CLI_RS08810 IPR022967 RNA-binding domain, S1 CLI_RS08815 IPR003136 Cytidylate kinase CLI_RS08815 IPR011994 Cytidylate kinase domain CLI_RS08815 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS08820 IPR008243 Chorismate mutase, AroH class CLI_RS08820 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS08825 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLI_RS08825 IPR023166 HI0933 insert-like domain CLI_RS08825 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS08830 IPR006095 Glutamate/phenylalanine/leucine/valine dehydrogenase CLI_RS08830 IPR006096 Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal CLI_RS08830 IPR006097 Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain CLI_RS08830 IPR014362 Glutamate dehydrogenase CLI_RS08830 IPR016040 NAD(P)-binding domain CLI_RS08835 IPR000281 Helix-turn-helix protein RpiR CLI_RS08835 IPR001347 Sugar isomerase (SIS) CLI_RS08835 IPR009057 Homeodomain-like CLI_RS08835 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS08840 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLI_RS08840 IPR002942 RNA-binding S4 domain CLI_RS08840 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLI_RS08840 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLI_RS08840 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS08845 IPR018657 Domain of unknown function DUF2088 CLI_RS08850 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS08850 IPR021144 Uncharacterised protein family UPF0597 CLI_RS08855 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS08865 IPR003660 HAMP linker domain CLI_RS08865 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS08865 IPR029151 Periplasmic sensor domain-like CLI_RS08865 IPR033463 CLI_RS08865 CLI_RS08870 IPR003834 Cytochrome c assembly protein, transmembrane domain CLI_RS08875 IPR005746 Thioredoxin CLI_RS08875 IPR012336 Thioredoxin-like fold CLI_RS08875 IPR013766 Thioredoxin domain CLI_RS08875 IPR017937 Thioredoxin, conserved site CLI_RS08880 IPR001110 Uncharacterised protein family UPF0012, conserved site CLI_RS08880 IPR003010 Carbon-nitrogen hydrolase CLI_RS08890 IPR006037 Regulator of K+ conductance, C-terminal CLI_RS08890 IPR006153 Cation/H+ exchanger CLI_RS08895 IPR003779 Carboxymuconolactone decarboxylase-like CLI_RS08895 IPR004675 Alkylhydroperoxidase AhpD core CLI_RS08895 IPR029032 AhpD-like CLI_RS08900 IPR000182 GNAT domain CLI_RS08900 IPR016181 Acyl-CoA N-acyltransferase CLI_RS08905 IPR001763 Rhodanese-like domain CLI_RS08910 IPR002765 Uncharacterised protein family UPF0145 CLI_RS08920 IPR012336 Thioredoxin-like fold CLI_RS08925 IPR000014 PAS domain CLI_RS08925 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS08925 IPR007202 4Fe-4S domain CLI_RS08925 IPR009016 Iron hydrogenase CLI_RS08925 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS08925 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08930 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLI_RS08935 IPR000014 PAS domain CLI_RS08935 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS08935 IPR007202 4Fe-4S domain CLI_RS08935 IPR009016 Iron hydrogenase CLI_RS08935 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS08935 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS08940 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS08940 IPR011854 Hydrogenase expression/formation protein HypE CLI_RS08940 IPR016188 PurM, N-terminal-like CLI_RS08945 IPR002780 Hydrogenase formation HypD protein CLI_RS08950 IPR001109 Hydrogenase expression/formation protein, HupF/HypC CLI_RS08950 IPR019812 Hydrogenase assembly chaperone, conserved site CLI_RS08955 IPR001792 Acylphosphatase-like domain CLI_RS08955 IPR004421 Carbamoyltransferase, HypF-type CLI_RS08955 IPR006070 YrdC-like domain CLI_RS08955 IPR011125 Zinc finger, HypF-type CLI_RS08955 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS08955 IPR017968 Acylphosphatase, conserved site CLI_RS08965 IPR001199 Cytochrome b5-like heme/steroid binding domain CLI_RS08970 IPR000671 Peptidase A31 family CLI_RS08970 IPR023430 Peptidase HybD-like domain CLI_RS08975 IPR001501 Nickel-dependent hydrogenase, large subunit CLI_RS08975 IPR018194 Nickel-dependent hydrogenase, large subunit, nickel binding site CLI_RS08975 IPR029014 NiFe hydrogenase-like CLI_RS08980 IPR001821 [NiFe]-hydrogenase, small subunit CLI_RS08980 IPR006137 NADH:ubiquinone oxidoreductase-like, 20kDa subunit CLI_RS08980 IPR027394 Cytochrome-c3 hydrogenase, C-terminal CLI_RS08985 IPR008875 TraX CLI_RS09000 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLI_RS09000 IPR005480 Carbamoyl-phosphate synthetase, large subunit oligomerisation domain CLI_RS09000 IPR005483 Carbamoyl-phosphate synthase large subunit, CPSase domain CLI_RS09000 IPR006275 Carbamoyl-phosphate synthase, large subunit CLI_RS09000 IPR011607 Methylglyoxal synthase-like domain CLI_RS09000 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS09000 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS09000 IPR016185 Pre-ATP-grasp domain CLI_RS09005 IPR002474 Carbamoyl-phosphate synthase, small subunit N-terminal domain CLI_RS09005 IPR006274 Carbamoyl-phosphate synthase, small subunit CLI_RS09005 IPR017926 Glutamine amidotransferase CLI_RS09005 IPR029062 Class I glutamine amidotransferase-like CLI_RS09040 IPR025359 Protein of unknown function DUF4263 CLI_RS09050 IPR015032 MTH538 TIR-like domain CLI_RS09055 IPR003439 ABC transporter-like CLI_RS09055 IPR003593 AAA+ ATPase domain CLI_RS09055 IPR017871 ABC transporter, conserved site CLI_RS09055 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09055 IPR032781 CLI_RS09055 CLI_RS09060 IPR001041 2Fe-2S ferredoxin-type domain CLI_RS09060 IPR003149 Iron hydrogenase, small subunit-like CLI_RS09060 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS09060 IPR009016 Iron hydrogenase CLI_RS09060 IPR012675 Beta-grasp domain CLI_RS09060 IPR013352 Iron hydrogenase, subset CLI_RS09060 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS09060 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS09060 IPR019574 NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding CLI_RS09065 IPR001949 NADH:ubiquinone oxidoreductase, 51kDa subunit, conserved site CLI_RS09065 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS09065 IPR012336 Thioredoxin-like fold CLI_RS09065 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS09065 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS09065 IPR019554 Soluble ligand binding domain CLI_RS09065 IPR019575 NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding CLI_RS09070 IPR002023 NADH-quinone oxidoreductase subunit E-like CLI_RS09070 IPR012336 Thioredoxin-like fold CLI_RS09075 IPR006153 Cation/H+ exchanger CLI_RS09080 IPR005502 ADP-ribosylation/Crystallin J1 CLI_RS09085 IPR002549 Uncharacterised protein family UPF0118 CLI_RS09090 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLI_RS09090 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS09090 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CLI_RS09090 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLI_RS09095 IPR021338 Protein of unknown function DUF2953 CLI_RS09100 IPR014229 Sporulation protein YtfJ CLI_RS09105 IPR005234 Chromosome segregation/condensation protein ScpB CLI_RS09105 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09110 IPR003768 Prokaryotic chromosome segregation/condensation protein ScpA CLI_RS09120 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLI_RS09120 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS09120 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CLI_RS09120 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLI_RS09125 IPR024787 EcsC protein CLI_RS09130 IPR005135 Endonuclease/exonuclease/phosphatase CLI_RS09140 IPR000053 Pyrimidine-nucleoside phosphorylase CLI_RS09140 IPR000312 Glycosyl transferase, family 3 CLI_RS09140 IPR013102 Pyrimidine nucleoside phosphorylase, C-terminal CLI_RS09140 IPR017459 Glycosyl transferase family 3, N-terminal domain CLI_RS09140 IPR017872 Pyrimidine-nucleoside phosphorylase, conserved site CLI_RS09140 IPR018090 Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic CLI_RS09145 IPR000845 Nucleoside phosphorylase domain CLI_RS09145 IPR001369 PNP/MTAP phosphorylase CLI_RS09145 IPR011268 Purine nucleoside phosphorylase CLI_RS09145 IPR011270 Purine nucleoside phosphorylase I, inosine/guanosine-specific CLI_RS09150 IPR002104 Integrase, catalytic CLI_RS09150 IPR004107 Integrase, SAM-like, N-terminal CLI_RS09150 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLI_RS09150 IPR011932 Tyrosine recombinase XerD CLI_RS09150 IPR013762 Integrase-like, catalytic core CLI_RS09150 IPR023009 Tyrosine recombinase XerC/XerD CLI_RS09150 IPR023109 Integrase/recombinase, N-terminal CLI_RS09160 IPR002798 Protein of unknown function DUF95, transmembrane CLI_RS09160 IPR014196 Sporulation stage II, protein M CLI_RS09165 IPR000086 NUDIX hydrolase domain CLI_RS09165 IPR004385 Nucleoside diphosphate pyrophosphatase CLI_RS09165 IPR015797 NUDIX hydrolase domain-like CLI_RS09165 IPR020476 NUDIX hydrolase CLI_RS09170 IPR002293 Amino acid/polyamine transporter I CLI_RS09175 IPR000064 Endopeptidase, NLPC/P60 domain CLI_RS09185 IPR002104 Integrase, catalytic CLI_RS09185 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLI_RS09185 IPR013762 Integrase-like, catalytic core CLI_RS09190 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain CLI_RS09190 IPR029051 Domain of unknown function DUF4352 CLI_RS09195 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS09195 IPR003646 SH3-like domain, bacterial-type CLI_RS09205 IPR019715 Haemolysin XhlA CLI_RS09245 IPR029432 Siphovirus Gp37-like protein CLI_RS09250 IPR008841 Siphovirus-type tail component CLI_RS09255 IPR010090 Phage tail tape measure protein CLI_RS09270 IPR006490 Phage major tail protein CLI_RS09270 IPR006724 Bacteriophage bIL286, Orf50, major tail CLI_RS09280 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS09285 IPR008767 Bacteriophage SPP1, head-tail adaptor CLI_RS09290 IPR006450 Phage protein of unkonwn function CLI_RS09290 IPR021146 Phage gp6-like head-tail connector protein CLI_RS09295 IPR006444 Phage major capsid protein, HK97 CLI_RS09295 IPR024455 Phage capsid CLI_RS09300 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS09300 IPR029045 ClpP/crotonase-like domain CLI_RS09305 IPR006427 Phage portal protein, HK97 CLI_RS09305 IPR006944 Bacteriophage/Gene transfer agent portal protein CLI_RS09315 IPR005021 Phage terminase CLI_RS09320 IPR006448 Putative phage terminase, small subunit, P27 family CLI_RS09330 IPR018760 Protein of unknown function DUF2326 CLI_RS09380 IPR000305 GIY-YIG nuclease superfamily CLI_RS09380 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS09380 IPR027299 GIY-YIG domain CLI_RS09410 IPR012933 HicA mRNA interferase family CLI_RS09420 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS09420 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS09430 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09450 IPR004843 Calcineurin-like phosphoesterase domain, apaH type CLI_RS09450 IPR029052 Metallo-dependent phosphatase-like CLI_RS09460 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09465 IPR002104 Integrase, catalytic CLI_RS09465 IPR004107 Integrase, SAM-like, N-terminal CLI_RS09465 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLI_RS09465 IPR013762 Integrase-like, catalytic core CLI_RS09465 IPR023109 Integrase/recombinase, N-terminal CLI_RS09470 IPR001789 Signal transduction response regulator, receiver domain CLI_RS09470 IPR011006 CheY-like superfamily CLI_RS09470 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09470 IPR012052 Sporulation transcription factor Spo0A CLI_RS09470 IPR014879 Sporulation initiation factor Spo0A, C-terminal CLI_RS09470 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS09475 IPR001478 PDZ domain CLI_RS09475 IPR008763 Peptidase S55, SpoIVB CLI_RS09475 IPR014219 Peptidase S55, sporulation stage IV, protein B CLI_RS09480 IPR005697 Homoserine O-succinyltransferase CLI_RS09480 IPR029062 Class I glutamine amidotransferase-like CLI_RS09485 IPR001342 Homoserine dehydrogenase, catalytic CLI_RS09485 IPR005106 Aspartate/homoserine dehydrogenase, NAD-binding CLI_RS09485 IPR016040 NAD(P)-binding domain CLI_RS09485 IPR016204 Homoserine dehydrogenase CLI_RS09490 IPR000277 Cys/Met metabolism, pyridoxal phosphate-dependent enzyme CLI_RS09490 IPR006235 O-acetylhomoserine/O-acetylserine sulfhydrylase CLI_RS09490 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS09490 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS09490 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS09495 IPR003395 RecF/RecN/SMC, N-terminal CLI_RS09495 IPR004604 DNA recombination/repair protein RecN CLI_RS09495 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09500 IPR001669 Arginine repressor CLI_RS09500 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09500 IPR020899 Arginine repressor, C-terminal CLI_RS09500 IPR020900 Arginine repressor, DNA-binding domain CLI_RS09500 IPR024946 Arginine repressor C-terminal-like domain CLI_RS09505 IPR002504 Inorganic polyphosphate/ATP-NAD kinase CLI_RS09505 IPR016064 ATP-NAD kinase-like domain CLI_RS09505 IPR017437 ATP-NAD kinase, PpnK-type, all-beta CLI_RS09505 IPR017438 Inorganic polyphosphate/ATP-NAD kinase, domain 1 CLI_RS09510 IPR002877 Ribosomal RNA methyltransferase FtsJ domain CLI_RS09510 IPR002942 RNA-binding S4 domain CLI_RS09510 IPR004538 Haemolysin A CLI_RS09510 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS09515 IPR005474 Transketolase, N-terminal CLI_RS09515 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS09515 IPR005477 Deoxyxylulose-5-phosphate synthase CLI_RS09515 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLI_RS09515 IPR020826 Transketolase binding site CLI_RS09515 IPR029061 Thiamin diphosphate-binding fold CLI_RS09515 IPR033247 CLI_RS09515 CLI_RS09515 IPR033248 CLI_RS09515 CLI_RS09525 IPR000092 Polyprenyl synthetase CLI_RS09525 IPR008949 Terpenoid synthase CLI_RS09525 IPR017446 Polyprenyl synthetase-related CLI_RS09530 IPR003761 Exonuclease VII, small subunit CLI_RS09535 IPR003753 Exonuclease VII, large subunit CLI_RS09535 IPR020579 Exonuclease VII, large subunit, C-terminal CLI_RS09535 IPR025824 OB-fold nucleic acid binding domain CLI_RS09540 IPR006027 NusB/RsmB/TIM44 CLI_RS09540 IPR011605 NusB antitermination factor CLI_RS09545 IPR005531 Alkaline shock protein Asp23 CLI_RS09550 IPR024232 Stage III sporulation protein AH-like CLI_RS09555 IPR014195 Sporulation stage III, protein AG CLI_RS09560 IPR014245 Sporulation stage III, protein AF CLI_RS09565 IPR014194 Sporulation stage III, protein AE CLI_RS09570 IPR014211 Stage III sporulation protein AD CLI_RS09570 IPR025664 Stage III sporulation protein AC/AD family CLI_RS09575 IPR009570 Stage III sporulation protein AC CLI_RS09575 IPR025664 Stage III sporulation protein AC/AD family CLI_RS09580 IPR014198 Stage III sporulation protein AB CLI_RS09585 IPR014217 Sporulation stage III, protein AA CLI_RS09585 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09595 IPR001059 Translation elongation factor P/YeiP, central CLI_RS09595 IPR008991 Translation protein SH3-like domain CLI_RS09595 IPR011768 Translation elongation factor P CLI_RS09595 IPR012340 Nucleic acid-binding, OB-fold CLI_RS09595 IPR013185 Translation elongation factor, KOW-like CLI_RS09595 IPR013852 Translation elongation factor P/YeiP, conserved site CLI_RS09595 IPR014722 Ribosomal protein L2 domain 2 CLI_RS09595 IPR015365 Elongation factor P, C-terminal CLI_RS09595 IPR020599 Translation elongation factor P/YeiP CLI_RS09600 IPR001874 Dehydroquinase, class II CLI_RS09600 IPR018509 Dehydroquinase, class II, conserved site CLI_RS09605 IPR000623 Shikimate kinase/Threonine synthase-like 1 CLI_RS09605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09605 IPR031322 CLI_RS09605 CLI_RS09630 IPR012902 Prokaryotic N-terminal methylation site CLI_RS09645 IPR012902 Prokaryotic N-terminal methylation site CLI_RS09650 IPR003004 GspF/PilC family CLI_RS09650 IPR018076 Type II secretion system F domain CLI_RS09655 IPR001482 Type II secretion system protein E CLI_RS09655 IPR007831 General secretory system II, protein E, N-terminal CLI_RS09655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09665 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS09670 IPR001653 Diaminopimelate epimerase, DapF CLI_RS09670 IPR018510 Diaminopimelate epimerase, active site CLI_RS09675 IPR008532 Domain of unknown function DUF814 CLI_RS09680 IPR001406 Pseudouridine synthase I, TruA CLI_RS09680 IPR020094 Pseudouridine synthase I, TruA, N-terminal CLI_RS09680 IPR020095 Pseudouridine synthase I, TruA, C-terminal CLI_RS09680 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CLI_RS09680 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS09690 IPR001310 Histidine triad (HIT) protein CLI_RS09690 IPR011146 HIT-like domain CLI_RS09690 IPR019808 Histidine triad, conserved site CLI_RS09695 IPR002129 Pyridoxal phosphate-dependent decarboxylase CLI_RS09695 IPR010107 Glutamate decarboxylase CLI_RS09695 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS09695 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS09705 IPR003660 HAMP linker domain CLI_RS09705 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS09705 IPR024478 4HB MCP domain CLI_RS09710 IPR005077 Peptidase C11, clostripain CLI_RS09710 IPR014173 Peptidase C11, Clostripain Clostridium species CLI_RS09720 IPR001789 Signal transduction response regulator, receiver domain CLI_RS09720 IPR001867 Signal transduction response regulator, C-terminal CLI_RS09720 IPR011006 CheY-like superfamily CLI_RS09720 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09720 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS09725 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09725 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS09725 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS09730 IPR002569 Peptide methionine sulphoxide reductase MsrA CLI_RS09730 IPR028427 Peptide methionine sulfoxide reductase CLI_RS09735 IPR001789 Signal transduction response regulator, receiver domain CLI_RS09735 IPR011006 CheY-like superfamily CLI_RS09740 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09740 IPR003660 HAMP linker domain CLI_RS09740 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS09740 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS09745 IPR001789 Signal transduction response regulator, receiver domain CLI_RS09745 IPR001867 Signal transduction response regulator, C-terminal CLI_RS09745 IPR011006 CheY-like superfamily CLI_RS09745 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09750 IPR032688 CLI_RS09750 CLI_RS09755 IPR032688 CLI_RS09755 CLI_RS09760 IPR003439 ABC transporter-like CLI_RS09760 IPR003593 AAA+ ATPase domain CLI_RS09760 IPR017871 ABC transporter, conserved site CLI_RS09760 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09770 IPR003439 ABC transporter-like CLI_RS09770 IPR003593 AAA+ ATPase domain CLI_RS09770 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS09770 IPR017871 ABC transporter, conserved site CLI_RS09770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09775 IPR003439 ABC transporter-like CLI_RS09775 IPR003593 AAA+ ATPase domain CLI_RS09775 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS09775 IPR017871 ABC transporter, conserved site CLI_RS09775 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09780 IPR000835 MarR-type HTH domain CLI_RS09780 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09785 IPR000182 GNAT domain CLI_RS09785 IPR016181 Acyl-CoA N-acyltransferase CLI_RS09785 IPR027455 Spermine/spermidine acetyltransferase, N-terminal domain CLI_RS09790 IPR000594 UBA/THIF-type NAD/FAD binding fold CLI_RS09790 IPR016040 NAD(P)-binding domain CLI_RS09795 IPR003749 ThiamineS/Molybdopterin converting factor subunit 1 CLI_RS09795 IPR012675 Beta-grasp domain CLI_RS09795 IPR016155 Molybdopterin synthase/thiamin biosynthesis sulphur carrier, beta-grasp CLI_RS09800 IPR001203 Aldehyde ferredoxin oxidoreductase, C-terminal CLI_RS09800 IPR013983 Aldehyde ferredoxin oxidoreductase, N-terminal CLI_RS09800 IPR013985 Aldehyde ferredoxin oxidoreductase, domain 3 CLI_RS09805 IPR000014 PAS domain CLI_RS09805 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS09805 IPR002197 DNA binding HTH domain, Fis-type CLI_RS09805 IPR003593 AAA+ ATPase domain CLI_RS09805 IPR009057 Homeodomain-like CLI_RS09805 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS09805 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS09805 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS09805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09810 IPR011037 Pyruvate kinase-like, insert domain CLI_RS09810 IPR015808 Molybdenum cofactor sulfurase, C-terminal-like CLI_RS09815 IPR002820 Molybdopterin cofactor biosynthesis C (MoaC) domain CLI_RS09815 IPR023045 Molybdenum cofactor biosynthesis C CLI_RS09815 IPR023046 Molybdenum cofactor biosynthesis C, bacterial-type CLI_RS09820 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLI_RS09820 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS09820 IPR007197 Radical SAM CLI_RS09820 IPR010505 Molybdenum cofactor synthesis C-terminal CLI_RS09820 IPR013483 Molybdenum cofactor biosynthesis protein A CLI_RS09820 IPR013785 Aldolase-type TIM barrel CLI_RS09825 IPR001453 Molybdopterin binding domain CLI_RS09825 IPR005110 MoeA, N-terminal and linker domain CLI_RS09825 IPR005111 MoeA, C-terminal, domain IV CLI_RS09825 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLI_RS09825 IPR024370 PBP domain CLI_RS09830 IPR001453 Molybdopterin binding domain CLI_RS09830 IPR005110 MoeA, N-terminal and linker domain CLI_RS09830 IPR005111 MoeA, C-terminal, domain IV CLI_RS09830 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLI_RS09835 IPR001453 Molybdopterin binding domain CLI_RS09835 IPR008284 Molybdenum cofactor biosynthesis, conserved site CLI_RS09835 IPR012245 Molybdenum cofactor biosynthesis protein MoaB CLI_RS09840 IPR003439 ABC transporter-like CLI_RS09840 IPR003593 AAA+ ATPase domain CLI_RS09840 IPR017871 ABC transporter, conserved site CLI_RS09840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09845 IPR000515 MetI-like domain CLI_RS09850 IPR024370 PBP domain CLI_RS09855 IPR002528 Multi antimicrobial extrusion protein CLI_RS09865 IPR015414 SNARE associated Golgi protein CLI_RS09865 IPR032816 CLI_RS09865 CLI_RS09870 IPR003439 ABC transporter-like CLI_RS09870 IPR003593 AAA+ ATPase domain CLI_RS09870 IPR017871 ABC transporter, conserved site CLI_RS09870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09875 IPR003838 Permease FtsX-like CLI_RS09885 IPR003439 ABC transporter-like CLI_RS09885 IPR003593 AAA+ ATPase domain CLI_RS09885 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS09885 IPR017871 ABC transporter, conserved site CLI_RS09885 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09890 IPR003439 ABC transporter-like CLI_RS09890 IPR003593 AAA+ ATPase domain CLI_RS09890 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS09890 IPR017871 ABC transporter, conserved site CLI_RS09890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09895 IPR000551 MerR-type HTH domain CLI_RS09895 IPR009061 DNA binding domain, putative CLI_RS09895 IPR011256 Regulatory factor, effector binding domain CLI_RS09900 IPR005025 NADPH-dependent FMN reductase-like CLI_RS09900 IPR029039 Flavoprotein-like CLI_RS09905 IPR025875 Leucine rich repeat 4 CLI_RS09905 IPR032675 CLI_RS09905 CLI_RS09910 IPR003610 Carbohydrate-binding module family 5/12 CLI_RS09910 IPR008757 Peptidase M6-like, domain CLI_RS09910 IPR024079 Metallopeptidase, catalytic domain CLI_RS09915 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS09915 IPR003593 AAA+ ATPase domain CLI_RS09915 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09915 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS09915 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS09915 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS09915 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09925 IPR006056 Enamine/imine deaminase YjgF-like CLI_RS09925 IPR006175 YjgF/Yer057p/UK114 family CLI_RS09925 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS09930 IPR001991 Sodium:dicarboxylate symporter CLI_RS09935 IPR004839 Aminotransferase, class I/classII CLI_RS09935 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS09935 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS09935 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS09935 IPR027619 Putative C-S lyase CLI_RS09940 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS09940 IPR021144 Uncharacterised protein family UPF0597 CLI_RS09950 IPR025875 Leucine rich repeat 4 CLI_RS09950 IPR032675 CLI_RS09950 CLI_RS09955 IPR008757 Peptidase M6-like, domain CLI_RS09955 IPR024079 Metallopeptidase, catalytic domain CLI_RS09960 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS09960 IPR003660 HAMP linker domain CLI_RS09960 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS09960 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS09965 IPR001789 Signal transduction response regulator, receiver domain CLI_RS09965 IPR001867 Signal transduction response regulator, C-terminal CLI_RS09965 IPR011006 CheY-like superfamily CLI_RS09965 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS09970 IPR003748 Protein of unknown function DUF169 CLI_RS09975 IPR003339 ABC/ECF transporter, transmembrane component CLI_RS09980 IPR003439 ABC transporter-like CLI_RS09980 IPR003593 AAA+ ATPase domain CLI_RS09980 IPR017871 ABC transporter, conserved site CLI_RS09980 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS09985 IPR017195 ABC-type thiamin-related transport system, permease component 1, predicted CLI_RS09990 IPR001608 Alanine racemase, N-terminal CLI_RS09990 IPR029066 PLP-binding barrel CLI_RS09995 IPR004761 Spore germination GerAB CLI_RS10000 IPR004995 Bacillus/Clostridium Ger spore germination protein CLI_RS10005 IPR004761 Spore germination GerAB CLI_RS10010 IPR008844 Spore germination GerAC CLI_RS10015 IPR004761 Spore germination GerAB CLI_RS10020 IPR010181 CGCAxxGCC motif CLI_RS10025 IPR003779 Carboxymuconolactone decarboxylase-like CLI_RS10025 IPR004675 Alkylhydroperoxidase AhpD core CLI_RS10025 IPR026445 Alkylhydroperoxidase/carboxymuconolactone decarboxylase family CLI_RS10025 IPR029032 AhpD-like CLI_RS10030 IPR007197 Radical SAM CLI_RS10030 IPR013785 Aldolase-type TIM barrel CLI_RS10030 IPR024521 Domain of unknown function DUF3641 CLI_RS10030 IPR026351 Radical SAM/Cys-rich domain protein CLI_RS10035 IPR001440 Tetratricopeptide TPR1 CLI_RS10035 IPR011990 Tetratricopeptide-like helical domain CLI_RS10035 IPR019734 Tetratricopeptide repeat CLI_RS10040 IPR006037 Regulator of K+ conductance, C-terminal CLI_RS10040 IPR006153 Cation/H+ exchanger CLI_RS10040 IPR030151 CLI_RS10040 CLI_RS10045 IPR001404 Heat shock protein Hsp90 family CLI_RS10045 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10045 IPR019805 Heat shock protein Hsp90, conserved site CLI_RS10045 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS10045 IPR020575 Heat shock protein Hsp90, N-terminal CLI_RS10050 IPR000432 DNA mismatch repair protein MutS, C-terminal CLI_RS10050 IPR007696 DNA mismatch repair protein MutS, core CLI_RS10050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10055 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS10055 IPR003352 Phosphotransferase system, EIIC CLI_RS10055 IPR011296 Phosphotransferase system, trehalose-specific IIBC component CLI_RS10055 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS10060 IPR006047 Glycosyl hydrolase, family 13, catalytic domain CLI_RS10060 IPR012769 Trehalose-6-phosphate hydrolase CLI_RS10060 IPR013780 Glycosyl hydrolase, family 13, all-beta CLI_RS10060 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS10060 IPR015902 Glycoside hydrolase, family 13 CLI_RS10060 IPR017853 Glycoside hydrolase, superfamily CLI_RS10060 IPR032091 CLI_RS10060 CLI_RS10065 IPR000524 Transcription regulator HTH, GntR CLI_RS10065 IPR011663 UbiC transcription regulator-associated CLI_RS10065 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10065 IPR012770 Trehalose operon transcriptional repressor CLI_RS10065 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLI_RS10070 IPR002178 PTS EIIA type-2 domain CLI_RS10070 IPR004715 Phosphotransferase system, IIA component fructose subfamily CLI_RS10070 IPR016152 Phosphotransferase/anion transporter CLI_RS10075 IPR003352 Phosphotransferase system, EIIC CLI_RS10075 IPR003353 Phosphotransferase system, fructose-specific IIB subunit CLI_RS10075 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CLI_RS10075 IPR006327 Phosphotransferase system, fructose IIC component CLI_RS10080 IPR011611 Carbohydrate kinase PfkB CLI_RS10080 IPR017583 Tagatose/fructose phosphokinase CLI_RS10080 IPR022463 Fructose 1-phosphate kinase CLI_RS10080 IPR029056 Ribokinase-like CLI_RS10085 IPR000771 Ketose-bisphosphate aldolase, class-II CLI_RS10085 IPR011288 D-tagatose-bisphosphate aldolase, class II, subunit KbaY/GatY CLI_RS10085 IPR013785 Aldolase-type TIM barrel CLI_RS10090 IPR000281 Helix-turn-helix protein RpiR CLI_RS10090 IPR001347 Sugar isomerase (SIS) CLI_RS10090 IPR009057 Homeodomain-like CLI_RS10090 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10095 IPR016787 Uncharacterised conserved protein UCP021328 CLI_RS10100 IPR006175 YjgF/Yer057p/UK114 family CLI_RS10100 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS10105 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS10105 IPR007197 Radical SAM CLI_RS10105 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS10105 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS10110 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS10120 IPR003660 HAMP linker domain CLI_RS10120 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS10120 IPR029151 Periplasmic sensor domain-like CLI_RS10130 IPR001608 Alanine racemase, N-terminal CLI_RS10130 IPR029066 PLP-binding barrel CLI_RS10135 IPR005144 ATP-cone CLI_RS10140 IPR000683 Oxidoreductase, N-terminal CLI_RS10140 IPR004104 Oxidoreductase, C-terminal CLI_RS10140 IPR016040 NAD(P)-binding domain CLI_RS10145 IPR000836 Phosphoribosyltransferase domain CLI_RS10145 IPR029057 Phosphoribosyltransferase-like CLI_RS10150 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS10155 IPR000160 GGDEF domain CLI_RS10155 IPR029787 Nucleotide cyclase CLI_RS10160 IPR005130 Serine dehydratase-like, alpha subunit CLI_RS10160 IPR021144 Uncharacterised protein family UPF0597 CLI_RS10165 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS10165 IPR003593 AAA+ ATPase domain CLI_RS10165 IPR009057 Homeodomain-like CLI_RS10165 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS10165 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS10165 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS10165 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10170 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLI_RS10170 IPR001650 Helicase, C-terminal CLI_RS10170 IPR011545 DEAD/DEAH box helicase domain CLI_RS10170 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS10170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10175 IPR014044 CAP domain CLI_RS10175 IPR014258 CAP domain, YkwD-like CLI_RS10180 IPR000524 Transcription regulator HTH, GntR CLI_RS10180 IPR004839 Aminotransferase, class I/classII CLI_RS10180 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10180 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS10180 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10185 IPR000620 Drug/metabolite transporter CLI_RS10190 IPR004839 Aminotransferase, class I/classII CLI_RS10190 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS10190 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS10190 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10195 IPR003439 ABC transporter-like CLI_RS10195 IPR003593 AAA+ ATPase domain CLI_RS10195 IPR017871 ABC transporter, conserved site CLI_RS10195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10195 IPR030679 CLI_RS10195 CLI_RS10200 IPR000515 MetI-like domain CLI_RS10200 IPR010065 Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family CLI_RS10205 IPR001638 Extracellular solute-binding protein, family 3 CLI_RS10210 IPR018657 Domain of unknown function DUF2088 CLI_RS10210 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS10215 IPR000192 Aminotransferase class V domain CLI_RS10215 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS10215 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS10215 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10215 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CLI_RS10215 IPR024169 Serine-pyruvate aminotransferase/2-aminoethylphosphonate-pyruvate transaminase CLI_RS10220 IPR001707 Chloramphenicol acetyltransferase CLI_RS10220 IPR023213 Chloramphenicol acetyltransferase-like domain CLI_RS10225 IPR006591 RNA polymerase archaeal subunit P/eukaryotic subunit RPABC4 CLI_RS10225 IPR018652 Protein of unknown function DUF2082, nucleic-acid-binding, Zn-ribbon CLI_RS10235 IPR003173 Transcriptional coactivator p15 (PC4) CLI_RS10235 IPR017154 Uncharacterised conserved protein UCP037246 CLI_RS10240 IPR029058 Alpha/Beta hydrolase fold CLI_RS10245 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS10245 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS10255 IPR000109 Proton-dependent oligopeptide transporter family CLI_RS10255 IPR011701 Major facilitator superfamily CLI_RS10255 IPR020846 Major facilitator superfamily domain CLI_RS10260 IPR000109 Proton-dependent oligopeptide transporter family CLI_RS10260 IPR011701 Major facilitator superfamily CLI_RS10260 IPR020846 Major facilitator superfamily domain CLI_RS10265 IPR000587 Creatinase, N-terminal CLI_RS10265 IPR000994 Peptidase M24, structural domain CLI_RS10265 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS10265 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS10270 IPR000073 Alpha/beta hydrolase fold-1 CLI_RS10270 IPR002410 Peptidase S33 CLI_RS10270 IPR005945 Proline-specific peptidase CLI_RS10270 IPR029058 Alpha/Beta hydrolase fold CLI_RS10280 IPR000175 Sodium:neurotransmitter symporter CLI_RS10290 IPR013783 Immunoglobulin-like fold CLI_RS10290 IPR024499 Protein of unknown function DUF2974 CLI_RS10290 IPR028974 TSP type-3 repeat CLI_RS10290 IPR029058 Alpha/Beta hydrolase fold CLI_RS10295 IPR000415 Nitroreductase-like CLI_RS10295 IPR029479 Nitroreductase CLI_RS10300 IPR002035 von Willebrand factor, type A CLI_RS10305 IPR015943 WD40/YVTN repeat-like-containing domain CLI_RS10305 IPR017986 WD40-repeat-containing domain CLI_RS10310 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10315 IPR010354 Oleate hydratase CLI_RS10315 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS10320 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS10320 IPR009057 Homeodomain-like CLI_RS10320 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS10325 IPR011101 Burkholderia phage phiE125, Gp37 CLI_RS10335 IPR001173 Glycosyltransferase 2-like CLI_RS10335 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10340 IPR001173 Glycosyltransferase 2-like CLI_RS10340 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10345 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS10345 IPR011004 Trimeric LpxA-like CLI_RS10345 IPR016185 Pre-ATP-grasp domain CLI_RS10345 IPR020019 Sialic acid O-acyltransferase, NeuD CLI_RS10350 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS10350 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS10350 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS10350 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10355 IPR001173 Glycosyltransferase 2-like CLI_RS10355 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10360 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS10360 IPR005835 Nucleotidyl transferase CLI_RS10360 IPR005908 Glucose-1-phosphate thymidylyltransferase, long form CLI_RS10360 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10365 IPR005888 dTDP-glucose 4,6-dehydratase CLI_RS10365 IPR016040 NAD(P)-binding domain CLI_RS10370 IPR025642 Domain of unknown function DUF4342 CLI_RS10375 IPR025642 Domain of unknown function DUF4342 CLI_RS10385 IPR029058 Alpha/Beta hydrolase fold CLI_RS10390 IPR006976 VanZ-like CLI_RS10395 IPR002213 UDP-glucuronosyl/UDP-glucosyltransferase CLI_RS10395 IPR006326 UDP-glycosyltransferase, MGT CLI_RS10400 IPR007159 AbrB-like domain CLI_RS10405 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS10405 IPR013108 Amidohydrolase 3 CLI_RS10405 IPR032466 CLI_RS10405 CLI_RS10410 IPR001248 Permease, cytosine/purines, uracil, thiamine, allantoin CLI_RS10410 IPR030191 CLI_RS10410 CLI_RS10420 IPR013785 Aldolase-type TIM barrel CLI_RS10430 IPR001525 C-5 cytosine methyltransferase CLI_RS10430 IPR018117 DNA methylase, C-5 cytosine-specific, active site CLI_RS10430 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS10430 IPR031303 CLI_RS10430 CLI_RS10435 IPR018891 Abortive bacteriophage infection, resistance CLI_RS10440 IPR025534 Protein of unknown function DUF4420 CLI_RS10445 IPR018310 Putative endonuclease, Z1 domain CLI_RS10450 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10460 IPR019292 5-methylcytosine restriction system component CLI_RS10475 IPR011109 Recombinase CLI_RS10480 IPR003615 HNH nuclease CLI_RS10485 IPR016040 NAD(P)-binding domain CLI_RS10490 IPR001173 Glycosyltransferase 2-like CLI_RS10490 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10495 IPR001173 Glycosyltransferase 2-like CLI_RS10495 IPR001296 Glycosyl transferase, family 1 CLI_RS10495 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS10495 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS10500 IPR000640 Translation elongation factor EFG, V domain CLI_RS10500 IPR000795 Elongation factor, GTP-binding domain CLI_RS10500 IPR005225 Small GTP-binding protein domain CLI_RS10500 IPR005517 Translation elongation factor EFG/EF2, domain IV CLI_RS10500 IPR009000 Translation protein, beta-barrel domain CLI_RS10500 IPR009022 Elongation factor G, III-V domain CLI_RS10500 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS10500 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS10500 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10505 IPR003610 Carbohydrate-binding module family 5/12 CLI_RS10505 IPR004954 Peptidase M60, viral enhancin protein CLI_RS10505 IPR031161 CLI_RS10505 CLI_RS10510 IPR001757 Cation-transporting P-type ATPase CLI_RS10510 IPR008250 P-type ATPase, A domain CLI_RS10510 IPR018303 P-type ATPase, phosphorylation site CLI_RS10510 IPR023214 HAD-like domain CLI_RS10510 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS10510 IPR027256 Cation-transporting P-type ATPase, subfamily IB CLI_RS10515 IPR003735 Metal-sensitive transcriptional repressor CLI_RS10520 IPR000249 Microcompartment protein, bacteria CLI_RS10520 IPR020808 Bacterial microcompartments protein, conserved site CLI_RS10525 IPR008300 Propanediol utilisation protein CLI_RS10530 IPR013357 Acetaldehyde dehydrogenase, acetylating CLI_RS10530 IPR015590 Aldehyde dehydrogenase domain CLI_RS10530 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS10530 IPR016162 Aldehyde dehydrogenase, N-terminal CLI_RS10530 IPR016163 Aldehyde dehydrogenase, C-terminal CLI_RS10535 IPR000249 Microcompartment protein, bacteria CLI_RS10540 IPR010424 Ethanolamine utilisation EutQ CLI_RS10540 IPR011051 RmlC-like cupin domain CLI_RS10540 IPR014710 RmlC-like jelly roll fold CLI_RS10545 IPR004992 Ethanolamine utilization protein EutN/carboxysome structural protein Ccml CLI_RS10545 IPR023414 Ethanolamine utilization protein-like domain CLI_RS10550 IPR000249 Microcompartment protein, bacteria CLI_RS10555 IPR005883 Type IV pilus assembly protein PilM CLI_RS10555 IPR013366 Ethanolamine utilisation EutJ CLI_RS10555 IPR018181 Heat shock protein 70, conserved site CLI_RS10565 IPR012381 Ethanolamine/propanediol utilisation protein, EutP/PduV CLI_RS10565 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10570 IPR000249 Microcompartment protein, bacteria CLI_RS10570 IPR009307 Ethanolamine utilisation EutS CLI_RS10575 IPR001989 Radical-activating enzyme, conserved site CLI_RS10575 IPR007197 Radical SAM CLI_RS10575 IPR012839 Glycyl radical enzyme activase CLI_RS10575 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS10575 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS10575 IPR030905 CLI_RS10575 CLI_RS10580 IPR001150 Glycine radical domain CLI_RS10580 IPR004184 Pyruvate formate lyase domain CLI_RS10580 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLI_RS10580 IPR030897 CLI_RS10580 CLI_RS10585 IPR015590 Aldehyde dehydrogenase domain CLI_RS10585 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS10585 IPR016162 Aldehyde dehydrogenase, N-terminal CLI_RS10585 IPR016163 Aldehyde dehydrogenase, C-terminal CLI_RS10590 IPR000249 Microcompartment protein, bacteria CLI_RS10595 IPR000249 Microcompartment protein, bacteria CLI_RS10605 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10615 IPR000551 MerR-type HTH domain CLI_RS10615 IPR009061 DNA binding domain, putative CLI_RS10615 IPR011256 Regulatory factor, effector binding domain CLI_RS10615 IPR029442 GyrI-like small molecule binding domain CLI_RS10620 IPR001670 Alcohol dehydrogenase, iron-type CLI_RS10620 IPR018211 Alcohol dehydrogenase, iron-type, conserved site CLI_RS10625 IPR002528 Multi antimicrobial extrusion protein CLI_RS10630 IPR011701 Major facilitator superfamily CLI_RS10630 IPR020846 Major facilitator superfamily domain CLI_RS10635 IPR000524 Transcription regulator HTH, GntR CLI_RS10635 IPR008920 Transcription regulator FadR/GntR, C-terminal CLI_RS10635 IPR011711 GntR, C-terminal CLI_RS10635 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10640 IPR000182 GNAT domain CLI_RS10640 IPR000835 MarR-type HTH domain CLI_RS10640 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10640 IPR016181 Acyl-CoA N-acyltransferase CLI_RS10660 IPR015315 Protein of unknown function DUF1963 CLI_RS10665 IPR025438 Domain of unknown function DUF4180 CLI_RS10670 IPR009061 DNA binding domain, putative CLI_RS10670 IPR010093 Excisionase/Xis, DNA-binding CLI_RS10670 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10675 IPR005754 Sortase family CLI_RS10675 IPR023365 Sortase domain CLI_RS10680 IPR008969 Carboxypeptidase-like, regulatory domain CLI_RS10680 IPR014766 Carboxypeptidase, regulatory domain CLI_RS10680 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS10680 IPR019931 LPXTG cell wall anchor domain CLI_RS10680 IPR019948 Gram-positive anchor CLI_RS10685 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS10685 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS10685 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS10690 IPR001789 Signal transduction response regulator, receiver domain CLI_RS10690 IPR001867 Signal transduction response regulator, C-terminal CLI_RS10690 IPR011006 CheY-like superfamily CLI_RS10690 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10690 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS10700 IPR014782 Peptidase M1, membrane alanine aminopeptidase, N-terminal CLI_RS10705 IPR003439 ABC transporter-like CLI_RS10705 IPR003593 AAA+ ATPase domain CLI_RS10705 IPR017871 ABC transporter, conserved site CLI_RS10705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10710 IPR003838 Permease FtsX-like CLI_RS10710 IPR027022 ABC transporter permease protein, BceB-type CLI_RS10715 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS10720 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS10720 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS10725 IPR021354 Protein of unknown function DUF2975 CLI_RS10730 IPR002085 Alcohol dehydrogenase superfamily, zinc-type CLI_RS10730 IPR011032 GroES (chaperonin 10)-like CLI_RS10730 IPR013154 Alcohol dehydrogenase GroES-like CLI_RS10730 IPR016040 NAD(P)-binding domain CLI_RS10730 IPR031640 CLI_RS10730 CLI_RS10735 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS10740 IPR030960 CLI_RS10740 CLI_RS10740 IPR030963 CLI_RS10740 CLI_RS10745 IPR003838 Permease FtsX-like CLI_RS10745 IPR027022 ABC transporter permease protein, BceB-type CLI_RS10750 IPR003439 ABC transporter-like CLI_RS10750 IPR003593 AAA+ ATPase domain CLI_RS10750 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10755 IPR031493 CLI_RS10755 CLI_RS10760 IPR002178 PTS EIIA type-2 domain CLI_RS10760 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CLI_RS10760 IPR011608 PRD domain CLI_RS10760 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10760 IPR013196 Helix-turn-helix, type 11 CLI_RS10760 IPR016152 Phosphotransferase/anion transporter CLI_RS10765 IPR004703 Phosphotransferase system, sugar-specific permease component CLI_RS10770 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CLI_RS10775 IPR002178 PTS EIIA type-2 domain CLI_RS10775 IPR016152 Phosphotransferase/anion transporter CLI_RS10780 IPR001585 Transaldolase CLI_RS10780 IPR011861 Transaldolase, Staphylococcus-type CLI_RS10780 IPR013785 Aldolase-type TIM barrel CLI_RS10800 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS10800 IPR011004 Trimeric LpxA-like CLI_RS10800 IPR018357 Hexapeptide transferase, conserved site CLI_RS10800 IPR024688 Maltose/galactoside acetyltransferase CLI_RS10810 IPR000994 Peptidase M24, structural domain CLI_RS10815 IPR000109 Proton-dependent oligopeptide transporter family CLI_RS10815 IPR005279 Amino acid/peptide transporter family CLI_RS10815 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CLI_RS10815 IPR020846 Major facilitator superfamily domain CLI_RS10820 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS10825 IPR009057 Homeodomain-like CLI_RS10825 IPR010499 Bacterial transcription activator, effector binding CLI_RS10825 IPR011256 Regulatory factor, effector binding domain CLI_RS10825 IPR018060 DNA binding HTH domain, AraC-type CLI_RS10825 IPR018062 HTH domain AraC-type, conserved site CLI_RS10825 IPR020449 Transcription regulator HTH, AraC- type CLI_RS10825 IPR029441 Integron-associated effector binding protein CLI_RS10830 IPR032250 CLI_RS10830 CLI_RS10835 IPR001155 NADH:flavin oxidoreductase/NADH oxidase, N-terminal CLI_RS10835 IPR013785 Aldolase-type TIM barrel CLI_RS10835 IPR016040 NAD(P)-binding domain CLI_RS10835 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS10840 IPR000551 MerR-type HTH domain CLI_RS10840 IPR009061 DNA binding domain, putative CLI_RS10850 IPR005537 Protein of unknown function, RAMP CLI_RS10850 IPR010172 CRISPR-associated protein, TM1791 CLI_RS10855 IPR010160 CRISPR-associated protein, Cmr5 CLI_RS10855 IPR023101 AF1862-like domain CLI_RS10860 IPR005537 Protein of unknown function, RAMP CLI_RS10860 IPR013410 CRISPR-associated RAMP Cmr4 CLI_RS10865 IPR011335 Restriction endonuclease type II-like CLI_RS10865 IPR011856 tRNA endonuclease-like domain CLI_RS10870 IPR019117 CRISPR-associated protein, Cmr3 CLI_RS10875 IPR013407 CRISPR-associated protein Crm2 CLI_RS10875 IPR024615 CRISPR-associated protein Crm2, N-terminal CLI_RS10880 IPR007522 CRISPR-associated protein TM1795 CLI_RS10885 IPR010156 CRISPR-associated protein, Cas6 CLI_RS10890 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS10900 IPR003719 Phenazine biosynthesis PhzF protein CLI_RS10905 IPR003719 Phenazine biosynthesis PhzF protein CLI_RS10910 IPR000524 Transcription regulator HTH, GntR CLI_RS10910 IPR004839 Aminotransferase, class I/classII CLI_RS10910 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS10910 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS10910 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS10910 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS10915 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS10915 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS10925 IPR024438 Staygreen protein CLI_RS10930 IPR013094 Alpha/beta hydrolase fold-3 CLI_RS10930 IPR029058 Alpha/Beta hydrolase fold CLI_RS10940 IPR002293 Amino acid/polyamine transporter I CLI_RS10945 IPR000719 Protein kinase domain CLI_RS10945 IPR011009 Protein kinase-like domain CLI_RS10945 IPR017441 Protein kinase, ATP binding site CLI_RS10955 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS10955 IPR008275 CoA enzyme activase CLI_RS10965 IPR001308 Electron transfer flavoprotein, alpha subunit CLI_RS10965 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS10965 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS10965 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS10965 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS10970 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CLI_RS10970 IPR012255 Electron transfer flavoprotein, beta subunit CLI_RS10970 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS10970 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS10975 IPR006089 Acyl-CoA dehydrogenase, conserved site CLI_RS10975 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLI_RS10975 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLI_RS10975 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLI_RS10975 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLI_RS10980 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS10985 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS10990 IPR003673 CoA-transferase family III CLI_RS10990 IPR023606 CoA-transferase family III domain CLI_RS10995 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS10995 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS10995 IPR029039 Flavoprotein-like CLI_RS11005 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS11010 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS11010 IPR008275 CoA enzyme activase CLI_RS11010 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS11015 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS11020 IPR000415 Nitroreductase-like CLI_RS11020 IPR029479 Nitroreductase CLI_RS11025 IPR003199 Choloylglycine hydrolase/Peptidase C59 family CLI_RS11025 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS11025 IPR029132 Choloylglycine hydrolase/NAAA C-terminal CLI_RS11030 IPR000182 GNAT domain CLI_RS11030 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11035 IPR004360 Glyoxalase/fosfomycin resistance/dioxygenase domain CLI_RS11035 IPR029068 Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase CLI_RS11040 IPR003474 Gluconate transporter CLI_RS11045 IPR005255 4-hydroxythreonine-4-phosphate dehydrogenase PdxA CLI_RS11045 IPR024084 Isopropylmalate dehydrogenase-like domain CLI_RS11050 IPR010737 Protein of unknown function, DUF1537 CLI_RS11050 IPR031475 CLI_RS11050 CLI_RS11055 IPR001034 HTH DeoR N-terminal domain CLI_RS11055 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11055 IPR014036 DeoR C-terminal sensor domain CLI_RS11055 IPR018356 Transcription regulator, HTH DeoR-type, conserved site CLI_RS11065 IPR003675 CAAX amino terminal protease CLI_RS11070 IPR005490 L,D-transpeptidase catalytic domain CLI_RS11070 IPR022029 Putative peptidoglycan binding domain CLI_RS11075 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS11075 IPR009057 Homeodomain-like CLI_RS11075 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS11075 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS11075 IPR025996 WHG domain CLI_RS11080 IPR029039 Flavoprotein-like CLI_RS11085 IPR029039 Flavoprotein-like CLI_RS11090 IPR016130 Protein-tyrosine phosphatase, active site CLI_RS11090 IPR025832 Domain of unknown function with GxGYxY motif CLI_RS11090 IPR029021 Protein-tyrosine phosphatase-like CLI_RS11090 IPR032626 CLI_RS11090 CLI_RS11095 IPR002085 Alcohol dehydrogenase superfamily, zinc-type CLI_RS11095 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLI_RS11095 IPR011032 GroES (chaperonin 10)-like CLI_RS11095 IPR013149 Alcohol dehydrogenase, C-terminal CLI_RS11095 IPR013154 Alcohol dehydrogenase GroES-like CLI_RS11095 IPR016040 NAD(P)-binding domain CLI_RS11095 IPR020843 Polyketide synthase, enoylreductase CLI_RS11100 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CLI_RS11100 IPR010047 Ni-containing CO dehydrogenase CLI_RS11100 IPR011254 Prismane-like CLI_RS11100 IPR016099 Prismane-like, alpha/beta-sandwich CLI_RS11100 IPR016101 CO dehydrogenase, alpha-bundle CLI_RS11105 IPR000688 Hydrogenase nickel incorporation protein HypA/HybF CLI_RS11110 IPR003495 CobW/HypB/UreG domain CLI_RS11110 IPR003593 AAA+ ATPase domain CLI_RS11110 IPR004392 Hydrogenase accessory protein HypB CLI_RS11110 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11115 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS11120 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS11120 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS11120 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS11120 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11125 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS11125 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS11125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11130 IPR003731 Dinitrogenase iron-molybdenum cofactor biosynthesis CLI_RS11140 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLI_RS11140 IPR025713 Motility protein B, N-terminal domain CLI_RS11145 IPR000540 Flagellar motor protein MotA, conserved site CLI_RS11145 IPR002898 MotA/TolQ/ExbB proton channel CLI_RS11145 IPR022522 Flagellar motor stator, MotA CLI_RS11150 IPR007253 Putative cell wall binding repeat 2 CLI_RS11155 IPR029050 Immunoprotective extracellular, immunoglobulin-like domain CLI_RS11155 IPR029051 Domain of unknown function DUF4352 CLI_RS11160 IPR008792 Coenzyme PQQ synthesis D CLI_RS11165 IPR004813 Oligopeptide transporter, OPT superfamily CLI_RS11165 IPR004814 Oligopeptide transporter HI_0561 CLI_RS11170 IPR001160 Peptidase M20C, Xaa-His dipeptidase CLI_RS11170 IPR002933 Peptidase M20 CLI_RS11170 IPR011650 Peptidase M20, dimerisation domain CLI_RS11175 IPR001597 Aromatic amino acid beta-eliminating lyase/threonine aldolase CLI_RS11175 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS11175 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS11175 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS11185 IPR004381 Glycerate kinase CLI_RS11185 IPR018193 Glycerate kinase, flavodoxin-like domain CLI_RS11190 IPR002347 Glucose/ribitol dehydrogenase CLI_RS11190 IPR016040 NAD(P)-binding domain CLI_RS11200 IPR003439 ABC transporter-like CLI_RS11200 IPR003593 AAA+ ATPase domain CLI_RS11200 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11205 IPR000182 GNAT domain CLI_RS11205 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11210 IPR000835 MarR-type HTH domain CLI_RS11210 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11210 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS11220 IPR021257 Protein of unknown function DUF2809 CLI_RS11225 IPR000257 Uroporphyrinogen decarboxylase (URO-D) CLI_RS11230 IPR006076 FAD dependent oxidoreductase CLI_RS11230 IPR007419 BFD-like [2Fe-2S]-binding domain CLI_RS11230 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS11235 IPR000551 MerR-type HTH domain CLI_RS11235 IPR009061 DNA binding domain, putative CLI_RS11235 IPR010499 Bacterial transcription activator, effector binding CLI_RS11235 IPR011256 Regulatory factor, effector binding domain CLI_RS11235 IPR029442 GyrI-like small molecule binding domain CLI_RS11240 IPR002293 Amino acid/polyamine transporter I CLI_RS11245 IPR002589 Macro domain CLI_RS11250 IPR010718 Protein of unknown function DUF1294 CLI_RS11250 IPR012156 Cold shock, CspA CLI_RS11260 IPR000835 MarR-type HTH domain CLI_RS11260 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11260 IPR023187 Transcriptional regulator MarR-type, conserved site CLI_RS11265 IPR023813 Conserved hypothetical protein CHP03987 CLI_RS11275 IPR000417 Hydroxyethylthiazole kinase CLI_RS11275 IPR029056 Ribokinase-like CLI_RS11280 IPR012652 Thiamine-precursor transporter protein CLI_RS11290 IPR000182 GNAT domain CLI_RS11290 IPR016181 Acyl-CoA N-acyltransferase CLI_RS11295 IPR001279 Beta-lactamase-like CLI_RS11300 IPR009057 Homeodomain-like CLI_RS11305 IPR004472 Dethiobiotin synthase BioD CLI_RS11305 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11310 IPR002684 Biotin synthase/Biotin biosynthesis bifunctional protein BioAB CLI_RS11310 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS11310 IPR007197 Radical SAM CLI_RS11310 IPR010722 Biotin and thiamin synthesis-associated domain CLI_RS11310 IPR013785 Aldolase-type TIM barrel CLI_RS11310 IPR024177 Biotin synthase CLI_RS11315 IPR003784 BioY protein CLI_RS11325 IPR000835 MarR-type HTH domain CLI_RS11325 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11330 IPR024418 Protein of unknown function DUF3862 CLI_RS11335 IPR000587 Creatinase, N-terminal CLI_RS11335 IPR000994 Peptidase M24, structural domain CLI_RS11335 IPR028980 Creatinase/Aminopeptidase P, N-terminal CLI_RS11335 IPR029149 Creatinase/Aminopeptidase P/Spt16, N-terminal CLI_RS11335 IPR032416 CLI_RS11335 CLI_RS11340 IPR000109 Proton-dependent oligopeptide transporter family CLI_RS11340 IPR005279 Amino acid/peptide transporter family CLI_RS11340 IPR018456 PTR2 family proton/oligopeptide symporter, conserved site CLI_RS11340 IPR020846 Major facilitator superfamily domain CLI_RS11350 IPR011630 Clostridium phage phiCTP1, Gp74 CLI_RS11355 IPR024307 YmaF CLI_RS11360 IPR003199 Choloylglycine hydrolase/Peptidase C59 family CLI_RS11360 IPR005079 Peptidase C45 CLI_RS11360 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS11365 IPR005025 NADPH-dependent FMN reductase-like CLI_RS11365 IPR029039 Flavoprotein-like CLI_RS11380 IPR024307 YmaF CLI_RS11385 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLI_RS11385 IPR012675 Beta-grasp domain CLI_RS11385 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS11390 IPR018540 Sporulation stage 0, Spo0E-like regulatory phosphatase CLI_RS11405 IPR002579 Peptide methionine sulphoxide reductase MrsB CLI_RS11405 IPR011057 Mss4-like CLI_RS11405 IPR028427 Peptide methionine sulfoxide reductase CLI_RS11410 IPR001189 Manganese/iron superoxide dismutase CLI_RS11410 IPR019831 Manganese/iron superoxide dismutase, N-terminal CLI_RS11410 IPR019832 Manganese/iron superoxide dismutase, C-terminal CLI_RS11410 IPR019833 Manganese/iron superoxide dismutase, binding site CLI_RS11415 IPR003439 ABC transporter-like CLI_RS11415 IPR003593 AAA+ ATPase domain CLI_RS11415 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS11415 IPR017871 ABC transporter, conserved site CLI_RS11415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11420 IPR009057 Homeodomain-like CLI_RS11420 IPR018060 DNA binding HTH domain, AraC-type CLI_RS11420 IPR020449 Transcription regulator HTH, AraC- type CLI_RS11425 IPR032688 CLI_RS11425 CLI_RS11430 IPR032688 CLI_RS11430 CLI_RS11435 IPR003439 ABC transporter-like CLI_RS11435 IPR003593 AAA+ ATPase domain CLI_RS11435 IPR017871 ABC transporter, conserved site CLI_RS11435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11440 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11440 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS11440 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS11445 IPR001789 Signal transduction response regulator, receiver domain CLI_RS11445 IPR001867 Signal transduction response regulator, C-terminal CLI_RS11445 IPR011006 CheY-like superfamily CLI_RS11445 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11445 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS11450 IPR012337 Ribonuclease H-like domain CLI_RS11450 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS11455 IPR011008 Dimeric alpha-beta barrel CLI_RS11455 IPR013097 Stress responsive alpha-beta barrel CLI_RS11460 IPR001279 Beta-lactamase-like CLI_RS11465 IPR000181 Formylmethionine deformylase CLI_RS11465 IPR023635 Peptide deformylase CLI_RS11470 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS11470 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS11475 IPR020916 Protein-glutamine gamma-glutamyltransferase, bacteria CLI_RS11490 IPR001226 Flavodoxin, conserved site CLI_RS11490 IPR008254 Flavodoxin/nitric oxide synthase CLI_RS11490 IPR010087 Flavodoxin, short chain CLI_RS11490 IPR029039 Flavoprotein-like CLI_RS11495 IPR015590 Aldehyde dehydrogenase domain CLI_RS11495 IPR016160 Aldehyde dehydrogenase, cysteine active site CLI_RS11495 IPR016161 Aldehyde/histidinol dehydrogenase CLI_RS11495 IPR016162 Aldehyde dehydrogenase, N-terminal CLI_RS11495 IPR016163 Aldehyde dehydrogenase, C-terminal CLI_RS11495 IPR029510 Aldehyde dehydrogenase, glutamic acid active site CLI_RS11500 IPR000951 Phthalate dioxygenase reductase CLI_RS11500 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLI_RS11500 IPR008333 Oxidoreductase, FAD-binding domain CLI_RS11500 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS11510 IPR003615 HNH nuclease CLI_RS11510 IPR029471 HNH endonuclease 5 CLI_RS11515 IPR000432 DNA mismatch repair protein MutS, C-terminal CLI_RS11515 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11545 IPR000838 RNA polymerase sigma factor 70, ECF, conserved site CLI_RS11545 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS11545 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11545 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS11545 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS11545 IPR014284 RNA polymerase sigma-70 like domain CLI_RS11550 IPR004761 Spore germination GerAB CLI_RS11560 IPR002646 Poly A polymerase, head domain CLI_RS11560 IPR003607 HD/PDEase domain CLI_RS11560 IPR006675 Uncharacterised domain HDIG CLI_RS11560 IPR032810 CLI_RS11560 CLI_RS11560 IPR032828 CLI_RS11560 CLI_RS11570 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS11570 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CLI_RS11590 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS11590 IPR003660 HAMP linker domain CLI_RS11590 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS11590 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS11595 IPR001789 Signal transduction response regulator, receiver domain CLI_RS11595 IPR001867 Signal transduction response regulator, C-terminal CLI_RS11595 IPR011006 CheY-like superfamily CLI_RS11595 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11600 IPR009060 UBA-like CLI_RS11605 IPR009060 UBA-like CLI_RS11605 IPR025642 Domain of unknown function DUF4342 CLI_RS11610 IPR024419 Protein of unknown function YvrJ CLI_RS11615 IPR002611 IstB-like ATP-binding protein CLI_RS11615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11620 IPR002218 Glucose-inhibited division protein A-related CLI_RS11620 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS11625 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS11625 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS11640 IPR007404 Protein of unknown function DUF457 CLI_RS11645 IPR000064 Endopeptidase, NLPC/P60 domain CLI_RS11655 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS11655 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS11660 IPR006119 Resolvase, N-terminal CLI_RS11675 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS11675 IPR003646 SH3-like domain, bacterial-type CLI_RS11685 IPR019715 Haemolysin XhlA CLI_RS11705 IPR022225 Phage tail fibre protein CLI_RS11710 IPR018755 Bacteriophage Mu, Gp48 CLI_RS11715 IPR006949 Baseplate assembly protein J-like, predicted CLI_RS11720 IPR020288 Protein of unknown function DUF2634 CLI_RS11725 IPR022555 Protein of unknown function, DUF2577 CLI_RS11735 IPR018392 LysM domain CLI_RS11745 IPR018649 Domain of unknown function DUF2078 CLI_RS11750 IPR014986 Clostridium phage phiCD119, XkdN CLI_RS11755 IPR018989 Protein of unknown function DUF2001 CLI_RS11760 IPR007067 Tail sheath protein CLI_RS11760 IPR020287 Tail sheath protein, C-terminal domain CLI_RS11770 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS11780 IPR021146 Phage gp6-like head-tail connector protein CLI_RS11790 IPR009636 Bacteriophage mv4, Gp20 CLI_RS11810 IPR006528 Phage head morphogenesis domain CLI_RS11815 IPR006428 Portal protein, SPP1-type CLI_RS11815 IPR021145 Portal protein, SPP1 Gp6-like CLI_RS11820 IPR004921 Terminase, large subunit CLI_RS11820 IPR006517 Archaeophage PsiM2, terminase large subunit CLI_RS11825 IPR005335 Terminase small subunit CLI_RS11840 IPR000330 SNF2-related CLI_RS11840 IPR001650 Helicase, C-terminal CLI_RS11840 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS11840 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11845 IPR011856 tRNA endonuclease-like domain CLI_RS11845 IPR014883 VRR-NUC domain CLI_RS11850 IPR007936 Virulence-associated E CLI_RS11850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11855 IPR007358 Nucleoid-associated protein NdpA CLI_RS11870 IPR001525 C-5 cytosine methyltransferase CLI_RS11870 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS11875 IPR001098 DNA-directed DNA polymerase, family A, palm domain CLI_RS11875 IPR012337 Ribonuclease H-like domain CLI_RS11880 IPR024256 Domain of unknown function DUF3797 CLI_RS11890 IPR012340 Nucleic acid-binding, OB-fold CLI_RS11890 IPR022595 Protein of unknown function DUF2815 CLI_RS11895 IPR021229 Protein of unknown function DUF2800 CLI_RS11915 IPR000943 RNA polymerase sigma-70 CLI_RS11915 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS11915 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS11915 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS11915 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS11915 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS11915 IPR014284 RNA polymerase sigma-70 like domain CLI_RS11920 IPR018873 KilA-N, DNA-binding domain CLI_RS11925 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS11925 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS11930 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS11930 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS11935 IPR006119 Resolvase, N-terminal CLI_RS11935 IPR011109 Recombinase CLI_RS11935 IPR025827 Recombinase zinc beta ribbon domain CLI_RS11940 IPR002218 Glucose-inhibited division protein A-related CLI_RS11940 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS11945 IPR000362 Fumarate lyase family CLI_RS11945 IPR004769 Adenylosuccinate lyase CLI_RS11945 IPR008948 L-Aspartase-like CLI_RS11945 IPR019468 Adenylosuccinate lyase C-terminal CLI_RS11945 IPR020557 Fumarate lyase, conserved site CLI_RS11945 IPR022761 Fumarate lyase, N-terminal CLI_RS11945 IPR024083 Fumarase/histidase, N-terminal CLI_RS11950 IPR007211 Protein of unknown function DUF378 CLI_RS11955 IPR000032 Phosphocarrier HPr protein-like CLI_RS11955 IPR001020 Phosphotransferase system, HPr histidine phosphorylation site CLI_RS11955 IPR002114 Phosphotransferase system, HPr serine phosphorylation site CLI_RS11960 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLI_RS11960 IPR004839 Aminotransferase, class I/classII CLI_RS11960 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS11960 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS11960 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS11965 IPR000620 Drug/metabolite transporter CLI_RS11975 IPR000537 UbiA prenyltransferase family CLI_RS11980 IPR007347 Sporulation stage V, protein S CLI_RS11985 IPR003607 HD/PDEase domain CLI_RS11985 IPR004087 K Homology domain CLI_RS11985 IPR004088 K Homology domain, type 1 CLI_RS11985 IPR006674 HD domain CLI_RS11985 IPR006675 Uncharacterised domain HDIG CLI_RS11985 IPR017705 Ribonuclease Y CLI_RS11985 IPR022711 Ribonuclease Y, N-terminal CLI_RS11990 IPR003593 AAA+ ATPase domain CLI_RS11990 IPR013765 DNA recombination and repair protein RecA CLI_RS11990 IPR020584 DNA recombination/repair protein RecA, conserved site CLI_RS11990 IPR023400 DNA recombination and repair protein RecA, C-terminal CLI_RS11990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS11995 IPR000462 CDP-alcohol phosphatidyltransferase CLI_RS11995 IPR004570 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase CLI_RS12000 IPR005839 Methylthiotransferase CLI_RS12000 IPR005840 Ribosomal protein S12 methylthiotransferase RimO CLI_RS12000 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS12000 IPR007197 Radical SAM CLI_RS12000 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12000 IPR013848 Methylthiotransferase, N-terminal CLI_RS12000 IPR020612 Methylthiotransferase, conserved site CLI_RS12000 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS12000 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS12005 IPR002543 FtsK domain CLI_RS12005 IPR003593 AAA+ ATPase domain CLI_RS12005 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12005 IPR018541 FtsK gamma domain CLI_RS12005 IPR025199 Domain of unknown function DUF4117 CLI_RS12005 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12010 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS12010 IPR029045 ClpP/crotonase-like domain CLI_RS12015 IPR001048 Aspartate/glutamate/uridylate kinase CLI_RS12015 IPR001341 Aspartate kinase domain CLI_RS12015 IPR005260 Aspartate kinase, monofunctional class CLI_RS12015 IPR018042 Aspartate kinase, conserved site CLI_RS12015 IPR027795 GATS-like ACT domain CLI_RS12020 IPR011033 PRC-barrel-like CLI_RS12020 IPR014238 Sporulation protein YlmC/YmxH CLI_RS12020 IPR027275 PRC-barrel domain CLI_RS12025 IPR001431 Peptidase M16, zinc-binding site CLI_RS12025 IPR007863 Peptidase M16, C-terminal domain CLI_RS12025 IPR011237 Peptidase M16 domain CLI_RS12025 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLI_RS12025 IPR011765 Peptidase M16, N-terminal CLI_RS12030 IPR001247 Exoribonuclease, phosphorolytic domain 1 CLI_RS12030 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS12030 IPR004087 K Homology domain CLI_RS12030 IPR004088 K Homology domain, type 1 CLI_RS12030 IPR012162 Polyribonucleotide nucleotidyltransferase CLI_RS12030 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12030 IPR015847 Exoribonuclease, phosphorolytic domain 2 CLI_RS12030 IPR015848 Polyribonucleotide nucleotidyltransferase, RNA-binding domain CLI_RS12030 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS12030 IPR022967 RNA-binding domain, S1 CLI_RS12030 IPR027408 PNPase/RNase PH domain CLI_RS12035 IPR000589 Ribosomal protein S15 CLI_RS12035 IPR005290 Ribosomal protein S15, bacterial-type CLI_RS12035 IPR009068 S15/NS1, RNA-binding CLI_RS12040 IPR002606 Riboflavin kinase, bacterial CLI_RS12040 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS12040 IPR015864 FAD synthetase CLI_RS12040 IPR015865 Riboflavin kinase domain, bacterial/eukaryotic CLI_RS12040 IPR023465 Riboflavin kinase domain CLI_RS12040 IPR023468 Riboflavin kinase CLI_RS12045 IPR002501 Pseudouridine synthase II CLI_RS12045 IPR014780 tRNA pseudouridine synthase II, TruB CLI_RS12045 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS12045 IPR032819 CLI_RS12045 CLI_RS12050 IPR001667 DDH domain CLI_RS12050 IPR003156 DHHA1 domain CLI_RS12055 IPR000238 Ribosome-binding factor A CLI_RS12055 IPR015946 K homology domain-like, alpha/beta CLI_RS12055 IPR020053 Ribosome-binding factor A, conserved site CLI_RS12055 IPR023799 Ribosome-binding factor A domain CLI_RS12060 IPR000178 Translation initiation factor aIF-2, bacterial-like CLI_RS12060 IPR005225 Small GTP-binding protein domain CLI_RS12060 IPR006847 Translation initiation factor IF-2, N-terminal CLI_RS12060 IPR009000 Translation protein, beta-barrel domain CLI_RS12060 IPR023115 Translation initiation factor IF- 2, domain 3 CLI_RS12060 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12065 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLI_RS12065 IPR029064 50S ribosomal protein L30e-like CLI_RS12070 IPR007393 Domain of unknown function DUF448 CLI_RS12075 IPR004087 K Homology domain CLI_RS12075 IPR009019 K homology domain, prokaryotic type CLI_RS12075 IPR010213 Transcription termination factor NusA CLI_RS12075 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12075 IPR013735 Transcription factor NusA, N-terminal CLI_RS12075 IPR015946 K homology domain-like, alpha/beta CLI_RS12075 IPR022967 RNA-binding domain, S1 CLI_RS12075 IPR025249 KH domain, NusA-like CLI_RS12075 IPR030842 CLI_RS12075 CLI_RS12080 IPR003728 Ribosome maturation factor RimP CLI_RS12080 IPR028989 Ribosome maturation factor RimP, N-terminal CLI_RS12080 IPR028998 Ribosome maturation factor RimP, C-terminal CLI_RS12085 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLI_RS12085 IPR004013 PHP, C-terminal CLI_RS12085 IPR006054 DNA polymerase III, epsilon subunit CLI_RS12085 IPR006308 DNA polymerase III, alpha subunit, Gram-positive type CLI_RS12085 IPR011708 Bacterial DNA polymerase III, alpha subunit CLI_RS12085 IPR012337 Ribonuclease H-like domain CLI_RS12085 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12085 IPR013520 Exonuclease, RNase T/DNA polymerase III CLI_RS12085 IPR023223 DNA polymerase III/inhibitor IA3, alpha-helix domain CLI_RS12085 IPR024754 DNA polymerase III polC-like, N-terminal domain II CLI_RS12085 IPR029460 DNA polymerase, helix-hairpin-helix motif CLI_RS12090 IPR004588 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type CLI_RS12090 IPR011005 Dihydropteroate synthase-like CLI_RS12090 IPR013785 Aldolase-type TIM barrel CLI_RS12090 IPR016425 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial CLI_RS12095 IPR001478 PDZ domain CLI_RS12095 IPR004387 Peptidase M50, putative membrane-associated zinc metallopeptidase CLI_RS12095 IPR008915 Peptidase M50 CLI_RS12100 IPR003821 1-deoxy-D-xylulose 5-phosphate reductoisomerase CLI_RS12100 IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal CLI_RS12100 IPR013644 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal CLI_RS12100 IPR016040 NAD(P)-binding domain CLI_RS12100 IPR026877 DXP reductoisomerase C-terminal domain CLI_RS12105 IPR002549 Uncharacterised protein family UPF0118 CLI_RS12120 IPR000374 Phosphatidate cytidylyltransferase CLI_RS12125 IPR001441 Decaprenyl diphosphate synthase-like CLI_RS12125 IPR018520 Di-trans-poly-cis-decaprenylcistransferase-like, conserved site CLI_RS12130 IPR002661 Ribosome recycling factor CLI_RS12130 IPR023584 Ribosome recycling factor domain CLI_RS12135 IPR001048 Aspartate/glutamate/uridylate kinase CLI_RS12135 IPR011817 Uridylate kinase CLI_RS12135 IPR015963 Uridylate kinase, bacteria CLI_RS12145 IPR001816 Translation elongation factor EFTs/EF1B CLI_RS12145 IPR009060 UBA-like CLI_RS12145 IPR014039 Translation elongation factor EFTs/EF1B, dimerisation CLI_RS12145 IPR018101 Translation elongation factor Ts, conserved site CLI_RS12150 IPR001865 Ribosomal protein S2 CLI_RS12150 IPR005706 Ribosomal protein S2, bacteria/mitochondria/plastid CLI_RS12150 IPR018130 Ribosomal protein S2, conserved site CLI_RS12150 IPR023591 Ribosomal protein S2, flavodoxin-like domain CLI_RS12155 IPR010312 GTP-sensing transcriptional pleiotropic repressor CodY, N-terminal CLI_RS12155 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12155 IPR013198 GTP-sensing helix-turn-helix, CodY, C-terminal CLI_RS12155 IPR014154 GTP-sensing transcriptional pleiotropic repressor CodY CLI_RS12155 IPR029016 GAF domain-like CLI_RS12160 IPR000380 DNA topoisomerase, type IA CLI_RS12160 IPR003601 DNA topoisomerase, type IA, domain 2 CLI_RS12160 IPR003602 DNA topoisomerase, type IA, DNA-binding domain CLI_RS12160 IPR005733 DNA topoisomerase I, bacterial-type CLI_RS12160 IPR006171 Toprim domain CLI_RS12160 IPR013497 DNA topoisomerase, type IA, central CLI_RS12160 IPR013498 DNA topoisomerase, type IA, zn finger CLI_RS12160 IPR013824 DNA topoisomerase, type IA, central region, subdomain 1 CLI_RS12160 IPR013825 DNA topoisomerase, type IA, central region, subdomain 2 CLI_RS12160 IPR023405 DNA topoisomerase, type IA, core domain CLI_RS12160 IPR023406 DNA topoisomerase, type IA, active site CLI_RS12160 IPR028612 DNA topoisomerase I, type IA CLI_RS12165 IPR003488 DNA recombination-mediator protein A CLI_RS12170 IPR000523 Magnesium chelatase, ChlI subunit CLI_RS12170 IPR004482 Mg chelatase-related protein CLI_RS12170 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS12170 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS12170 IPR025158 Mg chelatase-related protein, C-terminal domain CLI_RS12170 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12175 IPR003509 Uncharacterised protein family UPF0102 CLI_RS12175 IPR011335 Restriction endonuclease type II-like CLI_RS12175 IPR011856 tRNA endonuclease-like domain CLI_RS12180 IPR001352 Ribonuclease HII/HIII CLI_RS12180 IPR012337 Ribonuclease H-like domain CLI_RS12180 IPR022898 Ribonuclease HII CLI_RS12180 IPR024567 Ribonuclease HII/HIII domain CLI_RS12185 IPR006073 GTP binding domain CLI_RS12185 IPR016478 GTPase, MTG1 CLI_RS12185 IPR019991 GTP-binding protein, ribosome biogenesis, YlqF CLI_RS12185 IPR023179 GTP-binding protein, orthogonal bundle domain CLI_RS12185 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12190 IPR000223 Peptidase S26A, signal peptidase I CLI_RS12190 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS12190 IPR019756 Peptidase S26A, signal peptidase I, serine active site CLI_RS12190 IPR019757 Peptidase S26A, signal peptidase I, lysine active site CLI_RS12190 IPR019758 Peptidase S26A, signal peptidase I, conserved site CLI_RS12190 IPR019759 Peptidase S24/S26A/S26B CLI_RS12190 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS12195 IPR001857 Ribosomal protein L19 CLI_RS12195 IPR008991 Translation protein SH3-like domain CLI_RS12195 IPR018257 Ribosomal protein L19, conserved site CLI_RS12200 IPR002649 tRNA (guanine-N1-)-methyltransferase, bacteria CLI_RS12200 IPR016009 tRNA methyltransferase TRMD/TRM10-type domain CLI_RS12200 IPR023148 tRNA (guanine-N1-)-methyltransferase, C-terminal CLI_RS12200 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS12200 IPR029028 Alpha/beta knot methyltransferases CLI_RS12205 IPR002676 RimM protein CLI_RS12205 IPR009000 Translation protein, beta-barrel domain CLI_RS12205 IPR011033 PRC-barrel-like CLI_RS12205 IPR011961 16S rRNA processing protein RimM CLI_RS12205 IPR027275 PRC-barrel domain CLI_RS12210 IPR009019 K homology domain, prokaryotic type CLI_RS12210 IPR020627 Uncharacterised protein family UPF0109 CLI_RS12215 IPR000307 Ribosomal protein S16 CLI_RS12215 IPR020592 Ribosomal protein S16, conserved site CLI_RS12215 IPR023803 Ribosomal protein S16 domain CLI_RS12220 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLI_RS12220 IPR003593 AAA+ ATPase domain CLI_RS12220 IPR004125 Signal recognition particle, SRP54 subunit, M-domain CLI_RS12220 IPR004780 Signal recognition particle protein Ffh CLI_RS12220 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CLI_RS12220 IPR022941 Signal recognition particle, SRP54 subunit CLI_RS12220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12225 IPR007394 Putative helix-turn-helix protein, YlxM/p13-like CLI_RS12225 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12225 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS12230 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLI_RS12230 IPR003593 AAA+ ATPase domain CLI_RS12230 IPR004390 Signal-recognition particle receptor FtsY CLI_RS12230 IPR013822 Signal recognition particle, SRP54 subunit, helical bundle CLI_RS12230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12235 IPR003395 RecF/RecN/SMC, N-terminal CLI_RS12235 IPR010935 SMCs flexible hinge CLI_RS12235 IPR011890 Structural maintenance of chromosomes protein, prokaryotic CLI_RS12235 IPR024704 Structural maintenance of chromosomes protein CLI_RS12235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12245 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS12245 IPR007197 Radical SAM CLI_RS12245 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS12245 IPR032432 CLI_RS12245 CLI_RS12250 IPR000999 Ribonuclease III domain CLI_RS12250 IPR011907 Ribonuclease III CLI_RS12250 IPR014720 Double-stranded RNA-binding domain CLI_RS12255 IPR003231 Acyl carrier protein (ACP) CLI_RS12255 IPR006162 Phosphopantetheine attachment site CLI_RS12255 IPR009081 Acyl carrier protein-like CLI_RS12260 IPR003664 Fatty acid synthesis PlsX protein CLI_RS12260 IPR012281 Phospholipid biosynthesis protein, PlsX-like CLI_RS12260 IPR024084 Isopropylmalate dehydrogenase-like domain CLI_RS12265 IPR002677 Ribosomal protein L32p CLI_RS12265 IPR011332 Zinc-binding ribosomal protein CLI_RS12270 IPR003772 Protein of unknown function DUF177 CLI_RS12275 IPR000890 Aliphatic acid kinase, short-chain CLI_RS12275 IPR004372 Acetate/Proprionate kinase CLI_RS12275 IPR023865 Aliphatic acid kinase, short-chain, conserved site CLI_RS12280 IPR002505 Phosphate acetyl/butaryl transferase CLI_RS12280 IPR004614 Phosphate acetyltransferase CLI_RS12280 IPR012147 Phosphate acetyl/butyryltransferase CLI_RS12285 IPR002781 Transmembrane protein TauE like CLI_RS12295 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family CLI_RS12305 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS12305 IPR031002 CLI_RS12305 CLI_RS12315 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS12315 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12315 IPR031001 CLI_RS12315 CLI_RS12320 IPR002781 Transmembrane protein TauE like CLI_RS12325 IPR003660 HAMP linker domain CLI_RS12325 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS12325 IPR033479 CLI_RS12325 CLI_RS12345 IPR002293 Amino acid/polyamine transporter I CLI_RS12350 IPR002781 Transmembrane protein TauE like CLI_RS12365 IPR008794 Proline racemase family CLI_RS12370 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS12375 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS12375 IPR031000 CLI_RS12375 CLI_RS12385 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family CLI_RS12395 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS12395 IPR031002 CLI_RS12395 CLI_RS12405 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS12405 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12405 IPR031001 CLI_RS12405 CLI_RS12415 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS12415 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12415 IPR031001 CLI_RS12415 CLI_RS12425 IPR005524 Protein of unknown function DUF318, transmembrane CLI_RS12445 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS12445 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS12445 IPR031001 CLI_RS12445 CLI_RS12450 IPR000014 PAS domain CLI_RS12450 IPR000644 CBS domain CLI_RS12450 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS12450 IPR002197 DNA binding HTH domain, Fis-type CLI_RS12450 IPR003593 AAA+ ATPase domain CLI_RS12450 IPR009057 Homeodomain-like CLI_RS12450 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS12450 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS12450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12455 IPR008513 Uncharacterised protein family UPF0348 CLI_RS12455 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS12460 IPR014226 Sporulation integral membrane protein YlbJ CLI_RS12470 IPR001980 Coenzyme A biosynthesis protein CLI_RS12470 IPR004821 Cytidyltransferase-like domain CLI_RS12470 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS12475 IPR002052 DNA methylase, N-6 adenine-specific, conserved site CLI_RS12475 IPR004398 RNA methyltransferase, RsmD CLI_RS12475 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS12480 IPR001650 Helicase, C-terminal CLI_RS12480 IPR004609 ATP-dependent DNA helicase RecG CLI_RS12480 IPR011545 DEAD/DEAH box helicase domain CLI_RS12480 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12480 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS12480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12480 IPR033454 CLI_RS12480 CLI_RS12485 IPR004007 DhaL domain CLI_RS12485 IPR019986 DAK2 domain-containing protein YloV CLI_RS12485 IPR033470 CLI_RS12485 CLI_RS12490 IPR005531 Alkaline shock protein Asp23 CLI_RS12495 IPR001383 Ribosomal protein L28 CLI_RS12495 IPR026569 Ribosomal protein L28/L24 CLI_RS12510 IPR006282 Thiamin pyrophosphokinase CLI_RS12510 IPR007371 Thiamin pyrophosphokinase, catalytic domain CLI_RS12510 IPR007373 Thiamin pyrophosphokinase, vitamin B1-binding domain CLI_RS12515 IPR000056 Ribulose-phosphate 3-epimerase-like CLI_RS12515 IPR011060 Ribulose-phosphate binding barrel CLI_RS12515 IPR013785 Aldolase-type TIM barrel CLI_RS12515 IPR026019 Ribulose-phosphate 3-epimerase CLI_RS12520 IPR004881 Ribosome biogenesis GTPase RsgA, putative CLI_RS12520 IPR010914 EngC GTPase CLI_RS12520 IPR012340 Nucleic acid-binding, OB-fold CLI_RS12520 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12520 IPR031944 CLI_RS12520 CLI_RS12525 IPR000719 Protein kinase domain CLI_RS12525 IPR005543 PASTA domain CLI_RS12525 IPR008271 Serine/threonine-protein kinase, active site CLI_RS12525 IPR011009 Protein kinase-like domain CLI_RS12525 IPR017441 Protein kinase, ATP binding site CLI_RS12530 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLI_RS12530 IPR015655 Protein phosphatase 2C CLI_RS12535 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CLI_RS12535 IPR007197 Radical SAM CLI_RS12535 IPR013785 Aldolase-type TIM barrel CLI_RS12535 IPR027492 Dual-specificity RNA methyltransferase RlmN CLI_RS12540 IPR001678 Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p CLI_RS12540 IPR004573 rRNA small subunit methyltransferase B CLI_RS12540 IPR006027 NusB/RsmB/TIM44 CLI_RS12540 IPR023267 RNA (C5-cytosine) methyltransferase CLI_RS12540 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS12545 IPR007395 Putative neutral zinc metallopeptidase CLI_RS12550 IPR001555 Phosphoribosylglycinamide formyltransferase, active site CLI_RS12550 IPR002376 Formyl transferase, N-terminal CLI_RS12550 IPR005793 Formyl transferase, C-terminal CLI_RS12550 IPR005794 Methionyl-tRNA formyltransferase CLI_RS12550 IPR011034 Formyl transferase, C-terminal-like CLI_RS12555 IPR000181 Formylmethionine deformylase CLI_RS12555 IPR023635 Peptide deformylase CLI_RS12560 IPR001650 Helicase, C-terminal CLI_RS12560 IPR005259 Primosomal protein n CLI_RS12560 IPR011545 DEAD/DEAH box helicase domain CLI_RS12560 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS12560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12565 IPR003382 Flavoprotein CLI_RS12565 IPR005252 Coenzyme A biosynthesis bifunctional protein CoaBC CLI_RS12565 IPR007085 DNA/pantothenate metabolism flavoprotein, C-terminal CLI_RS12570 IPR003716 DNA-directed RNA polymerase, omega subunit CLI_RS12570 IPR006110 RNA polymerase, subunit omega/K/RPB6 CLI_RS12570 IPR012293 RNA polymerase subunit, RPB6/omega CLI_RS12575 IPR008145 Guanylate kinase/L-type calcium channel beta subunit CLI_RS12575 IPR017665 Guanylate kinase CLI_RS12575 IPR020590 Guanylate kinase, conserved site CLI_RS12575 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12580 IPR007169 Uncharacterised protein family UPF0296 CLI_RS12585 IPR005229 Conserved hypothetical protein CHP00255 CLI_RS12585 IPR013527 YicC-like, N-terminal CLI_RS12585 IPR013551 Domain of unknown function DUF1732 CLI_RS12590 IPR006034 Asparaginase/glutaminase CLI_RS12590 IPR027473 L-asparaginase, C-terminal domain CLI_RS12590 IPR027474 L-asparaginase, N-terminal CLI_RS12600 IPR014201 Sporulation stage IV, protein A CLI_RS12600 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12605 IPR008983 Tumour necrosis factor-like domain CLI_RS12610 IPR006109 Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal CLI_RS12610 IPR006168 Glycerol-3-phosphate dehydrogenase, NAD-dependent CLI_RS12610 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLI_RS12610 IPR011128 Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal CLI_RS12610 IPR013328 Dehydrogenase, multihelical CLI_RS12610 IPR016040 NAD(P)-binding domain CLI_RS12615 IPR003593 AAA+ ATPase domain CLI_RS12615 IPR005225 Small GTP-binding protein domain CLI_RS12615 IPR006073 GTP binding domain CLI_RS12615 IPR015946 K homology domain-like, alpha/beta CLI_RS12615 IPR016484 GTP-binding protein EngA CLI_RS12615 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12615 IPR032859 CLI_RS12615 CLI_RS12620 IPR001478 PDZ domain CLI_RS12620 IPR007549 Domain of unknown function DUF512 CLI_RS12625 IPR026022 PhoU domain CLI_RS12625 IPR028366 Phosphate transport system protein PhoU CLI_RS12630 IPR003439 ABC transporter-like CLI_RS12630 IPR003593 AAA+ ATPase domain CLI_RS12630 IPR005670 Phosphate transport system permease protein 1 CLI_RS12630 IPR017871 ABC transporter, conserved site CLI_RS12630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12635 IPR000515 MetI-like domain CLI_RS12635 IPR005672 Phosphate transport system permease protein PstA CLI_RS12640 IPR000515 MetI-like domain CLI_RS12640 IPR011864 Phosphate ABC transporter, permease protein PstC CLI_RS12645 IPR011862 Phosphate binding protein CLI_RS12645 IPR024370 PBP domain CLI_RS12650 IPR000014 PAS domain CLI_RS12650 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS12650 IPR003660 HAMP linker domain CLI_RS12650 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS12650 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS12650 IPR031967 CLI_RS12650 CLI_RS12655 IPR001789 Signal transduction response regulator, receiver domain CLI_RS12655 IPR001867 Signal transduction response regulator, C-terminal CLI_RS12655 IPR011006 CheY-like superfamily CLI_RS12655 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12655 IPR016032 Signal transduction response regulator, C-terminal effector CLI_RS12660 IPR003730 Multi-copper polyphenol oxidoreductase, laccase CLI_RS12660 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLI_RS12665 IPR003796 Ribonucleotide reductase regulator NrdR-like CLI_RS12665 IPR005144 ATP-cone CLI_RS12670 IPR011033 PRC-barrel-like CLI_RS12670 IPR014238 Sporulation protein YlmC/YmxH CLI_RS12670 IPR027275 PRC-barrel domain CLI_RS12675 IPR000943 RNA polymerase sigma-70 CLI_RS12675 IPR007624 RNA polymerase sigma-70 region 3 CLI_RS12675 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS12675 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS12675 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12675 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS12675 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS12675 IPR014212 RNA polymerase sigma-G type CLI_RS12675 IPR014284 RNA polymerase sigma-70 like domain CLI_RS12675 IPR014322 RNA polymerase sigma-B/F/G type CLI_RS12675 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CLI_RS12680 IPR000943 RNA polymerase sigma-70 CLI_RS12680 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS12680 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS12680 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12680 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS12680 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS12680 IPR014200 RNA polymerase sigma-E type CLI_RS12680 IPR014284 RNA polymerase sigma-70 like domain CLI_RS12680 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CLI_RS12685 IPR005081 Peptidase U4, sporulation factor SpoIIGA CLI_RS12690 IPR000158 Cell division protein FtsZ CLI_RS12690 IPR003008 Tubulin/FtsZ, GTPase domain CLI_RS12690 IPR008280 Tubulin/FtsZ, C-terminal CLI_RS12690 IPR018316 Tubulin/FtsZ, 2-layer sandwich domain CLI_RS12690 IPR020805 Cell division protein FtsZ, conserved site CLI_RS12690 IPR024757 Cell division protein FtsZ, C-terminal CLI_RS12695 IPR003494 SHS2 domain inserted in FtsA CLI_RS12695 IPR020823 Cell division protein FtsA CLI_RS12700 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS12710 IPR001482 Type II secretion system protein E CLI_RS12710 IPR003593 AAA+ ATPase domain CLI_RS12710 IPR006321 Pilus retraction protein PilT CLI_RS12710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12715 IPR006151 Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase CLI_RS12715 IPR011342 Shikimate dehydrogenase CLI_RS12715 IPR013708 Shikimate dehydrogenase substrate binding, N-terminal CLI_RS12715 IPR016040 NAD(P)-binding domain CLI_RS12715 IPR022893 Shikimate, quinate/shikimate dehydrogenase CLI_RS12720 IPR000943 RNA polymerase sigma-70 CLI_RS12720 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS12720 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS12720 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12720 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS12720 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS12720 IPR014209 RNA polymerase sigma-K type CLI_RS12720 IPR014284 RNA polymerase sigma-70 like domain CLI_RS12720 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CLI_RS12725 IPR018540 Sporulation stage 0, Spo0E-like regulatory phosphatase CLI_RS12735 IPR019060 Domain of unknown function DUF2382 CLI_RS12740 IPR019060 Domain of unknown function DUF2382 CLI_RS12745 IPR016181 Acyl-CoA N-acyltransferase CLI_RS12755 IPR024432 Putative exodeoxyribonuclease 8, PDDEXK-like domain CLI_RS12760 IPR004590 DNA single-strand annealing protein RecT CLI_RS12760 IPR018330 RecT family CLI_RS12765 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS12765 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS12770 IPR013762 Integrase-like, catalytic core CLI_RS12775 IPR001460 Penicillin-binding protein, transpeptidase CLI_RS12775 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS12780 IPR000764 Uridine kinase like CLI_RS12780 IPR006083 Phosphoribulokinase/uridine kinase CLI_RS12780 IPR026008 Uridine kinase CLI_RS12780 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12785 IPR001539 Peptidase U32 CLI_RS12785 IPR032525 CLI_RS12785 CLI_RS12790 IPR002935 O-methyltransferase, family 3 CLI_RS12790 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS12795 IPR003770 Uncharacterised protein family UPF0755, YceG-like CLI_RS12795 IPR013087 Zinc finger C2H2-type/integrase DNA-binding domain CLI_RS12800 IPR000640 Translation elongation factor EFG, V domain CLI_RS12800 IPR000795 Elongation factor, GTP-binding domain CLI_RS12800 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS12800 IPR005225 Small GTP-binding protein domain CLI_RS12800 IPR006298 GTP-binding protein TypA CLI_RS12800 IPR009000 Translation protein, beta-barrel domain CLI_RS12800 IPR009022 Elongation factor G, III-V domain CLI_RS12800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12800 IPR031157 CLI_RS12800 CLI_RS12805 IPR001279 Beta-lactamase-like CLI_RS12805 IPR001587 Ribonuclease J, conserved site CLI_RS12805 IPR004613 Ribonuclease J CLI_RS12805 IPR011108 RNA-metabolising metallo-beta-lactamase CLI_RS12805 IPR030854 CLI_RS12805 CLI_RS12810 IPR002481 Ferric-uptake regulator CLI_RS12810 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12815 IPR009711 Uncharacterised protein family UPF0473 CLI_RS12820 IPR005227 Resolvase, holliday junction-type, YqgF-like CLI_RS12820 IPR006641 YqgF/RNase H-like domain CLI_RS12820 IPR012337 Ribonuclease H-like domain CLI_RS12825 IPR009309 Uncharacterised protein family UPF0297 CLI_RS12830 IPR002318 Alanine-tRNA ligase, class IIc CLI_RS12830 IPR003156 DHHA1 domain CLI_RS12830 IPR009000 Translation protein, beta-barrel domain CLI_RS12830 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLI_RS12830 IPR018162 Alanine-tRNA ligase, class IIc, anti-codon-binding domain CLI_RS12830 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CLI_RS12830 IPR018164 Alanyl-tRNA synthetase, class IIc, N-terminal CLI_RS12830 IPR023033 Alanine-tRNA ligase, eukaryota/bacteria CLI_RS12835 IPR002549 Uncharacterised protein family UPF0118 CLI_RS12840 IPR011033 PRC-barrel-like CLI_RS12840 IPR027275 PRC-barrel domain CLI_RS12845 IPR002871 NIF system FeS cluster assembly, NifU, N-terminal CLI_RS12845 IPR017787 NIF system FeS cluster assembly, NifU-like CLI_RS12850 IPR000192 Aminotransferase class V domain CLI_RS12850 IPR010240 Cysteine desulfurase CLI_RS12850 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS12850 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS12850 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS12850 IPR016454 Cysteine desulfurase, NifS CLI_RS12850 IPR017772 Cysteine desulfurase, NifS, bacterial/archaeal CLI_RS12850 IPR020578 Aminotransferase class-V pyridoxal-phosphate binding site CLI_RS12855 IPR000944 Transcription regulator Rrf2-like CLI_RS12855 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS12860 IPR003593 AAA+ ATPase domain CLI_RS12860 IPR003959 ATPase, AAA-type, core CLI_RS12860 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLI_RS12860 IPR021886 MgsA AAA+ ATPase C-terminal CLI_RS12860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS12860 IPR032423 CLI_RS12860 CLI_RS12865 IPR004013 PHP, C-terminal CLI_RS12865 IPR010140 Histidinol phosphate phosphatase, HisJ CLI_RS12865 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS12870 IPR004776 Auxin efflux carrier CLI_RS12875 IPR003797 DegV CLI_RS12880 IPR001455 TusA-like domain CLI_RS12880 IPR003787 Sulphur relay, DsrE/F-like protein CLI_RS12880 IPR019870 Selenium metabolism protein YedF CLI_RS12880 IPR027396 DsrEFH-like CLI_RS12885 IPR003462 Ornithine cyclodeaminase/mu-crystallin CLI_RS12885 IPR016040 NAD(P)-binding domain CLI_RS12885 IPR023401 Ornithine cyclodeaminase, N-terminal CLI_RS12890 IPR001463 Sodium:alanine symporter CLI_RS12895 IPR001463 Sodium:alanine symporter CLI_RS12900 IPR025510 Domain of unknown function DUF4397 CLI_RS12905 IPR012854 Copper amine oxidase-like, N-terminal CLI_RS12910 IPR010141 Phosphoribosylformylglycinamidine synthase, FGAM CLI_RS12910 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS12910 IPR016188 PurM, N-terminal-like CLI_RS12910 IPR029062 Class I glutamine amidotransferase-like CLI_RS12915 IPR002528 Multi antimicrobial extrusion protein CLI_RS12920 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CLI_RS12920 IPR008279 PEP-utilising enzyme, mobile domain CLI_RS12920 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS12920 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS12925 IPR009081 Acyl carrier protein-like CLI_RS12930 IPR000873 AMP-dependent synthetase/ligase CLI_RS12935 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLI_RS12935 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLI_RS12935 IPR016039 Thiolase-like CLI_RS12940 IPR001031 Thioesterase CLI_RS12940 IPR012223 Thioesterase type II, NRPS/PKS/S-FAS CLI_RS12940 IPR029058 Alpha/Beta hydrolase fold CLI_RS12945 IPR000873 AMP-dependent synthetase/ligase CLI_RS12945 IPR009081 Acyl carrier protein-like CLI_RS12945 IPR020459 AMP-binding CLI_RS12945 IPR020845 AMP-binding, conserved site CLI_RS12950 IPR000182 GNAT domain CLI_RS12950 IPR016181 Acyl-CoA N-acyltransferase CLI_RS12955 IPR009081 Acyl carrier protein-like CLI_RS12960 IPR002500 Phosphoadenosine phosphosulphate reductase CLI_RS12960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS12965 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLI_RS12970 IPR008278 4'-phosphopantetheinyl transferase superfamily CLI_RS12975 IPR002292 Ornithine/putrescine carbamoyltransferase CLI_RS12975 IPR006130 Aspartate/ornithine carbamoyltransferase CLI_RS12975 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLI_RS12975 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLI_RS12975 IPR024904 Ornithine carbamoyltransferase CLI_RS12980 IPR001048 Aspartate/glutamate/uridylate kinase CLI_RS12980 IPR003964 Carbamate kinase CLI_RS12985 IPR001085 Serine hydroxymethyltransferase CLI_RS12985 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS12985 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS12985 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS12985 IPR019798 Serine hydroxymethyltransferase, pyridoxal phosphate binding site CLI_RS12990 IPR010619 Domain of unknown function DUF1212 CLI_RS12995 IPR024528 Domain of unknown function DUF3815 CLI_RS13000 IPR003735 Metal-sensitive transcriptional repressor CLI_RS13005 IPR000150 Cof protein CLI_RS13005 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLI_RS13005 IPR023214 HAD-like domain CLI_RS13010 IPR032619 CLI_RS13010 CLI_RS13015 IPR004821 Cytidyltransferase-like domain CLI_RS13015 IPR006674 HD domain CLI_RS13015 IPR011989 Armadillo-like helical CLI_RS13015 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS13015 IPR016024 Armadillo-type fold CLI_RS13020 IPR001236 Lactate/malate dehydrogenase, N-terminal CLI_RS13020 IPR016040 NAD(P)-binding domain CLI_RS13025 IPR005025 NADPH-dependent FMN reductase-like CLI_RS13025 IPR029039 Flavoprotein-like CLI_RS13030 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLI_RS13030 IPR004013 PHP, C-terminal CLI_RS13030 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS13035 IPR001948 Peptidase M18 CLI_RS13035 IPR023358 Peptidase M18, domain 2 CLI_RS13040 IPR002523 Mg2+ transporter protein, CorA-like/Zinc transport protein ZntB CLI_RS13045 IPR002698 5-formyltetrahydrofolate cyclo-ligase CLI_RS13045 IPR024185 5-formyltetrahydrofolate cyclo-ligase-like domain CLI_RS13050 IPR003755 HPr(Ser) kinase/phosphorylase CLI_RS13050 IPR011104 HPr kinase/phosphorylase, C-terminal CLI_RS13050 IPR011126 HPr(Ser) kinase/phosphorylase, N-terminal CLI_RS13050 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13050 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like CLI_RS13055 IPR009242 Protein of unknown function DUF896 CLI_RS13055 IPR023218 UPF0291 structural domain CLI_RS13060 IPR015414 SNARE associated Golgi protein CLI_RS13060 IPR032816 CLI_RS13060 CLI_RS13065 IPR015414 SNARE associated Golgi protein CLI_RS13065 IPR032816 CLI_RS13065 CLI_RS13070 IPR004017 Cysteine-rich domain CLI_RS13070 IPR009051 Alpha-helical ferredoxin CLI_RS13070 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13070 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13075 IPR002575 Aminoglycoside phosphotransferase CLI_RS13075 IPR011009 Protein kinase-like domain CLI_RS13080 IPR018641 Transferase 1, rSAM/selenodomain-associated CLI_RS13080 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13085 IPR001173 Glycosyltransferase 2-like CLI_RS13085 IPR026461 Transferase 2, rSAM/selenodomain-associated CLI_RS13085 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13090 IPR001307 Thiosulphate sulfurtransferase, conserved site CLI_RS13090 IPR001763 Rhodanese-like domain CLI_RS13095 IPR004464 Fructose-1,6-bisphosphatase class 2/Sedoheputulose-1,7-bisphosphatase CLI_RS13100 IPR018540 Sporulation stage 0, Spo0E-like regulatory phosphatase CLI_RS13110 IPR001279 Beta-lactamase-like CLI_RS13110 IPR008254 Flavodoxin/nitric oxide synthase CLI_RS13110 IPR016440 Rubredoxin-oxygen oxidoreductase CLI_RS13110 IPR029039 Flavoprotein-like CLI_RS13120 IPR001910 Inosine/uridine-preferring nucleoside hydrolase domain CLI_RS13120 IPR023186 Inosine/uridine-preferring nucleoside hydrolase CLI_RS13125 IPR000181 Formylmethionine deformylase CLI_RS13125 IPR023635 Peptide deformylase CLI_RS13130 IPR002699 ATPase, V1 complex, subunit D CLI_RS13135 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLI_RS13135 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CLI_RS13135 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLI_RS13135 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLI_RS13135 IPR022879 V-type ATP synthase regulatory subunit B/beta CLI_RS13135 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CLI_RS13135 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13140 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLI_RS13140 IPR000793 ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal CLI_RS13140 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLI_RS13140 IPR020003 ATPase, alpha/beta subunit, nucleotide-binding domain, active site CLI_RS13140 IPR022878 V-type ATP synthase catalytic alpha chain CLI_RS13140 IPR024034 ATPase, F1 complex beta subunit/V1 complex, C-terminal CLI_RS13140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13140 IPR031686 CLI_RS13140 CLI_RS13145 IPR008218 ATPase, V1 complex, subunit F CLI_RS13145 IPR022944 ATPase, V1 complex, subunit F, bacterial/archaeal CLI_RS13150 IPR002843 ATPase, V0 complex, c/d subunit CLI_RS13155 IPR002842 ATPase, V1/A1 complex, subunit E CLI_RS13155 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS13160 IPR000245 V-ATPase proteolipid subunit CLI_RS13160 IPR002379 V-ATPase proteolipid subunit C-like domain CLI_RS13165 IPR002490 V-type ATPase, V0 complex, 116kDa subunit family CLI_RS13170 IPR028987 F-type ATP synthase subunit B-like, membrane domain CLI_RS13175 IPR006158 Cobalamin (vitamin B12)-binding domain CLI_RS13175 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS13175 IPR007197 Radical SAM CLI_RS13175 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS13175 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS13175 IPR025288 Domain of unknown function DUF4080 CLI_RS13180 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS13185 IPR001531 Phospholipase C domain CLI_RS13185 IPR008947 Phospholipase C/P1 nuclease domain CLI_RS13185 IPR029002 Phospholipase C/D CLI_RS13190 IPR011041 Soluble quinoprotein glucose/sorbosone dehydrogenase CLI_RS13190 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS13190 IPR012938 Glucose/Sorbosone dehydrogenase CLI_RS13195 IPR001757 Cation-transporting P-type ATPase CLI_RS13195 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS13195 IPR005782 Calcium-transporting P-type ATPase, subfamily IIA, SERCA-type CLI_RS13195 IPR006068 Cation-transporting P-type ATPase, C-terminal CLI_RS13195 IPR006408 Calcium-transporting P-type ATPase, subfamily IIB CLI_RS13195 IPR008250 P-type ATPase, A domain CLI_RS13195 IPR018303 P-type ATPase, phosphorylation site CLI_RS13195 IPR023214 HAD-like domain CLI_RS13195 IPR023298 P-type ATPase, transmembrane domain CLI_RS13195 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS13200 IPR000644 CBS domain CLI_RS13200 IPR001667 DDH domain CLI_RS13200 IPR004097 DHHA2 domain CLI_RS13200 IPR010766 DRTGG CLI_RS13200 IPR028979 HPr(Ser) kinase/phosphorylase, N-terminal domain like CLI_RS13210 IPR001444 Flagellar basal body rod protein, N-terminal CLI_RS13210 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13210 IPR019776 Flagellar basal body rod protein, conserved site CLI_RS13210 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13215 IPR001444 Flagellar basal body rod protein, N-terminal CLI_RS13215 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13215 IPR019776 Flagellar basal body rod protein, conserved site CLI_RS13215 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13230 IPR000943 RNA polymerase sigma-70 CLI_RS13230 IPR007624 RNA polymerase sigma-70 region 3 CLI_RS13230 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS13230 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS13230 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13230 IPR012845 RNA polymerase sigma factor, FliA/WhiG CLI_RS13230 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS13230 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS13230 IPR014284 RNA polymerase sigma-70 like domain CLI_RS13230 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CLI_RS13235 IPR009875 PilZ domain CLI_RS13235 IPR009926 Type III secretion system flagellar brake protein YcgR, N-terminal CLI_RS13240 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS13240 IPR025501 ATP binding protein MinD CLI_RS13240 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13245 IPR000897 Signal recognition particle, SRP54 subunit, GTPase domain CLI_RS13245 IPR003593 AAA+ ATPase domain CLI_RS13245 IPR020006 Signal-recognition particle (SRP)-type GTPase CLI_RS13245 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13250 IPR001712 Type III secretion system FHIPEP CLI_RS13250 IPR006301 Flagellar biosynthesis protein FlhA CLI_RS13250 IPR025505 FHIPEP conserved site CLI_RS13255 IPR002010 Type III secretion system inner membrane R protein CLI_RS13255 IPR006135 Type III secretion system substrate exporter CLI_RS13255 IPR006136 Type III exporter system, flagellar biosynthetic protein FlhB CLI_RS13255 IPR006303 Flagellar biosynthesis protein FliR CLI_RS13255 IPR029025 Type III secretion system substrate exporter, C-terminal CLI_RS13260 IPR002191 Bacterial export protein family 3 CLI_RS13260 IPR006305 Flagellar biosynthesis protein FliQ CLI_RS13265 IPR005837 Flagellar transport protein FliP CLI_RS13265 IPR005838 Type III secretion system inner membrane P protein CLI_RS13270 IPR022781 Flagellar biosynthesis protein, FliO CLI_RS13275 IPR005503 Flagellar basal body-associated protein FliL CLI_RS13280 IPR006665 Outer membrane protein, OmpA/MotB, C-terminal CLI_RS13280 IPR025713 Motility protein B, N-terminal domain CLI_RS13285 IPR000540 Flagellar motor protein MotA, conserved site CLI_RS13285 IPR002898 MotA/TolQ/ExbB proton channel CLI_RS13285 IPR022522 Flagellar motor stator, MotA CLI_RS13290 IPR009384 Flagellar CLI_RS13295 IPR001444 Flagellar basal body rod protein, N-terminal CLI_RS13295 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13295 IPR019776 Flagellar basal body rod protein, conserved site CLI_RS13295 IPR020013 Fagellar hook-basal body protein, FlgE/F/G CLI_RS13300 IPR013367 Flagellar, putative CLI_RS13305 IPR005648 Flagellar hook capping protein CLI_RS13310 IPR021136 Flagellar hook-length control protein-like, C-terminal CLI_RS13315 IPR012823 Flagellar export FliJ CLI_RS13320 IPR000194 ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain CLI_RS13320 IPR003593 AAA+ ATPase domain CLI_RS13320 IPR004100 ATPase, F1 complex alpha/beta subunit, N-terminal domain CLI_RS13320 IPR005714 ATPase, type III secretion system, FliI/YscN CLI_RS13320 IPR022425 Flagellar export ATPase FliI, clade 2 CLI_RS13320 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13320 IPR032463 CLI_RS13320 CLI_RS13325 IPR018035 Flagellar assembly protein FliH/Type III secretion system HrpE CLI_RS13330 IPR000090 Flagellar motor switch protein FliG CLI_RS13330 IPR011002 Flagellar motor switch protein FliG, alpha-helical CLI_RS13330 IPR023087 CLI_RS13330 CLI_RS13330 IPR028263 Flagellar motor switch protein FliG, N-terminal domain CLI_RS13330 IPR032779 CLI_RS13330 CLI_RS13340 IPR001624 Flagellar hook-basal body complex protein FliE CLI_RS13345 IPR001444 Flagellar basal body rod protein, N-terminal CLI_RS13345 IPR006299 Flagellar basal-body rod protein FlgC CLI_RS13345 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13350 IPR001444 Flagellar basal body rod protein, N-terminal CLI_RS13350 IPR006300 Flagellar basal-body rod protein FlgB CLI_RS13355 IPR001029 Flagellin, D0/D1 domain CLI_RS13355 IPR001492 Flagellin CLI_RS13365 IPR000362 Fumarate lyase family CLI_RS13365 IPR008948 L-Aspartase-like CLI_RS13365 IPR009049 Argininosuccinate lyase CLI_RS13365 IPR020557 Fumarate lyase, conserved site CLI_RS13365 IPR022761 Fumarate lyase, N-terminal CLI_RS13365 IPR024083 Fumarase/histidase, N-terminal CLI_RS13365 IPR029419 Argininosuccinate lyase, C-terminal CLI_RS13370 IPR001518 Argininosuccinate synthase CLI_RS13370 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS13370 IPR018223 Argininosuccinate synthase, conserved site CLI_RS13370 IPR023434 Argininosuccinate synthase, type 1 subfamily CLI_RS13370 IPR024074 Argininosuccinate synthetase, catalytic/multimerisation domain body CLI_RS13385 IPR001736 Phospholipase D/Transphosphatidylase CLI_RS13385 IPR022924 Cardiolipin synthase CLI_RS13385 IPR025202 Phospholipase D-like domain CLI_RS13385 IPR027379 Cardiolipin synthase N-terminal CLI_RS13385 IPR030874 CLI_RS13385 CLI_RS13390 IPR010343 Protein of unknown function DUF939 CLI_RS13400 IPR006976 VanZ-like CLI_RS13400 IPR016747 Phosphotransbutyrylase CLI_RS13410 IPR016040 NAD(P)-binding domain CLI_RS13415 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CLI_RS13415 IPR013132 N-acetylneuraminic acid synthase, N-terminal CLI_RS13415 IPR013785 Aldolase-type TIM barrel CLI_RS13415 IPR013974 SAF domain CLI_RS13420 IPR003329 Acylneuraminate cytidylyltransferase CLI_RS13420 IPR007235 Glycosyl transferase, family 28, C-terminal CLI_RS13420 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13425 IPR007016 O-antigen ligase-related CLI_RS13435 IPR025536 Domain of unknown function DUF4422 CLI_RS13440 IPR004379 UDP-galactopyranose mutase CLI_RS13440 IPR015899 UDP-galactopyranose mutase, C-terminal CLI_RS13440 IPR016040 NAD(P)-binding domain CLI_RS13445 IPR003362 Bacterial sugar transferase CLI_RS13450 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS13450 IPR005702 Exopolysaccharide synthesis protein CLI_RS13450 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13455 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS13455 IPR016667 Capsular polysaccharide synthesis, CpsB/CapC CLI_RS13460 IPR003856 Lipopolysaccharide biosynthesis CLI_RS13460 IPR032807 CLI_RS13460 CLI_RS13465 IPR004474 Cell envelope-related transcriptional attenuator domain CLI_RS13470 IPR025906 Putative motility protein CLI_RS13475 IPR018540 Sporulation stage 0, Spo0E-like regulatory phosphatase CLI_RS13480 IPR018540 Sporulation stage 0, Spo0E-like regulatory phosphatase CLI_RS13485 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS13490 IPR001029 Flagellin, D0/D1 domain CLI_RS13490 IPR001492 Flagellin CLI_RS13515 IPR000653 DegT/DnrJ/EryC1/StrS aminotransferase CLI_RS13515 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS13515 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS13515 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS13515 IPR026385 Aminotransferase, LLPSF_NHT_00031 family CLI_RS13520 IPR016040 NAD(P)-binding domain CLI_RS13520 IPR026390 NAD dependent epimerase/dehydratase, LLPSF_EDH_00030 family CLI_RS13525 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS13525 IPR011004 Trimeric LpxA-like CLI_RS13525 IPR016185 Pre-ATP-grasp domain CLI_RS13525 IPR018357 Hexapeptide transferase, conserved site CLI_RS13525 IPR020019 Sialic acid O-acyltransferase, NeuD CLI_RS13530 IPR003737 N-acetylglucosaminyl phosphatidylinositol deacetylase-related CLI_RS13530 IPR024078 Putative deacetylase LmbE-like domain CLI_RS13535 IPR003329 Acylneuraminate cytidylyltransferase CLI_RS13535 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13540 IPR011226 ATP-grasp family CLI_RS13540 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS13540 IPR016185 Pre-ATP-grasp domain CLI_RS13545 IPR006190 Antifreeze-like/N-acetylneuraminic acid synthase C-terminal CLI_RS13545 IPR013132 N-acetylneuraminic acid synthase, N-terminal CLI_RS13545 IPR013785 Aldolase-type TIM barrel CLI_RS13545 IPR013974 SAF domain CLI_RS13550 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS13555 IPR003331 UDP-N-acetylglucosamine 2-epimerase CLI_RS13555 IPR020004 UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing CLI_RS13560 IPR000644 CBS domain CLI_RS13560 IPR005835 Nucleotidyl transferase CLI_RS13560 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS13570 IPR002826 6-hydroxymethylpterin diphosphokinase MptE-like CLI_RS13575 IPR001029 Flagellin, D0/D1 domain CLI_RS13575 IPR001492 Flagellin CLI_RS13585 IPR003481 Flagellar hook-associated protein 2, N-terminal CLI_RS13585 IPR010809 Flagellar hook-associated 2, C-terminal CLI_RS13590 IPR003713 Flagellar protein FliS CLI_RS13600 IPR005186 Flagellar protein FlaG protein CLI_RS13605 IPR003751 Carbon storage regulator CLI_RS13610 IPR003775 Flagellar assembly factor FliW CLI_RS13610 IPR024046 Flagellar assembly factor FliW domain CLI_RS13615 IPR001029 Flagellin, D0/D1 domain CLI_RS13615 IPR013384 Flagellar hook-associated protein 3 CLI_RS13620 IPR001444 Flagellar basal body rod protein, N-terminal CLI_RS13620 IPR002371 Flagellar hook-associated protein, FlgK CLI_RS13620 IPR010930 Flagellar basal-body/hook protein, C-terminal domain CLI_RS13625 IPR007809 FlgN-like domain CLI_RS13630 IPR007412 Anti-sigma-28 factor, FlgM CLI_RS13630 IPR031316 CLI_RS13630 CLI_RS13635 IPR001172 Flagellar motor switch FliN/Type III secretion HrcQb CLI_RS13635 IPR001543 Surface presentation of antigen (SpoA) CLI_RS13635 IPR007597 CheC-like protein CLI_RS13635 IPR012826 Flagellar motor switch FliN CLI_RS13635 IPR028976 CheC-like domain CLI_RS13640 IPR001543 Surface presentation of antigen (SpoA) CLI_RS13640 IPR001689 Flagellar motor switch protein FliM CLI_RS13640 IPR028976 CheC-like domain CLI_RS13645 IPR002545 CheW-like protein CLI_RS13650 IPR001789 Signal transduction response regulator, receiver domain CLI_RS13650 IPR011006 CheY-like superfamily CLI_RS13655 IPR007597 CheC-like protein CLI_RS13655 IPR028976 CheC-like domain CLI_RS13660 IPR002545 CheW-like protein CLI_RS13660 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13660 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS13660 IPR004105 Histidine kinase CheA-like, homodimeric domain CLI_RS13660 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS13660 IPR008207 Signal transduction histidine kinase, phosphotransfer (Hpt) domain CLI_RS13660 IPR010808 Signal transduction histidine kinase, P2 response regulator-binding CLI_RS13660 IPR015162 CheY binding CLI_RS13665 IPR000780 MCP methyltransferase, CheR-type CLI_RS13665 IPR022641 MCP methyltransferase, CheR-type, all-alpha domain, N-terminal CLI_RS13665 IPR022642 MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal CLI_RS13665 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS13670 IPR000673 Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase CLI_RS13670 IPR001789 Signal transduction response regulator, receiver domain CLI_RS13670 IPR008248 Signal transduction response regulator, chemotaxis, CheB CLI_RS13670 IPR011006 CheY-like superfamily CLI_RS13675 IPR005659 Chemoreceptor glutamine deamidase CheD CLI_RS13675 IPR011324 Cytotoxic necrotizing factor-like, catalytic CLI_RS13680 IPR002545 CheW-like protein CLI_RS13685 IPR005646 Protein of unknown function DUF342 CLI_RS13685 IPR032782 CLI_RS13685 CLI_RS13690 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS13690 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS13690 IPR003352 Phosphotransferase system, EIIC CLI_RS13690 IPR011055 Duplicated hybrid motif CLI_RS13690 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS13695 IPR004341 CAT RNA-binding domain CLI_RS13695 IPR011608 PRD domain CLI_RS13700 IPR001544 Aminotransferase, class IV CLI_RS13700 IPR018300 Aminotransferase, class IV, conserved site CLI_RS13705 IPR006383 HAD-superfamily hydrolase, subfamily IB, PSPase-like CLI_RS13705 IPR006385 HAD-superfamily hydrolase, subfamily IB, PSPase-like, bacterial CLI_RS13705 IPR023214 HAD-like domain CLI_RS13710 IPR009711 Uncharacterised protein family UPF0473 CLI_RS13720 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CLI_RS13720 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CLI_RS13720 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLI_RS13720 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLI_RS13720 IPR011895 Pyruvate-flavodoxin oxidoreductase CLI_RS13720 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13720 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13720 IPR019456 Pyruvate-flavodoxin oxidoreductase, EKR domain CLI_RS13720 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CLI_RS13720 IPR029061 Thiamin diphosphate-binding fold CLI_RS13720 IPR033412 CLI_RS13720 CLI_RS13725 IPR004276 Glycosyl transferase, family 28 CLI_RS13725 IPR006009 N-acetylglucosaminyltransferase, MurG CLI_RS13725 IPR007235 Glycosyl transferase, family 28, C-terminal CLI_RS13730 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS13735 IPR000014 PAS domain CLI_RS13735 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13735 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS13735 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS13740 IPR001667 DDH domain CLI_RS13740 IPR003156 DHHA1 domain CLI_RS13740 IPR004610 Bacterial RecJ exonuclease CLI_RS13745 IPR001719 AP endonuclease 2 CLI_RS13745 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS13750 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS13750 IPR012336 Thioredoxin-like fold CLI_RS13755 IPR007863 Peptidase M16, C-terminal domain CLI_RS13755 IPR011237 Peptidase M16 domain CLI_RS13755 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLI_RS13755 IPR011765 Peptidase M16, N-terminal CLI_RS13760 IPR007267 GtrA-like protein CLI_RS13765 IPR002818 ThiJ/PfpI CLI_RS13765 IPR006287 DJ-1 CLI_RS13765 IPR029062 Class I glutamine amidotransferase-like CLI_RS13770 IPR006699 Glycerol-3-phosphate responsive antiterminator CLI_RS13775 IPR002205 DNA topoisomerase, type IIA, subunit A/C-terminal CLI_RS13775 IPR006691 DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel CLI_RS13775 IPR013758 DNA topoisomerase, type IIA, subunit A/ C-terminal, alpha-beta CLI_RS13775 IPR013760 DNA topoisomerase, type IIA-like domain CLI_RS13775 IPR024946 Arginine repressor C-terminal-like domain CLI_RS13780 IPR000565 DNA topoisomerase, type IIA, subunit B CLI_RS13780 IPR001241 DNA topoisomerase, type IIA CLI_RS13780 IPR002288 DNA gyrase B subunit, C-terminal CLI_RS13780 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS13780 IPR006171 Toprim domain CLI_RS13780 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLI_RS13780 IPR013759 DNA topoisomerase, type IIA, central domain CLI_RS13780 IPR013760 DNA topoisomerase, type IIA-like domain CLI_RS13780 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS13780 IPR018522 DNA topoisomerase, type IIA, conserved site CLI_RS13780 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS13790 IPR006153 Cation/H+ exchanger CLI_RS13795 IPR011322 Nitrogen regulatory PII-like, alpha/beta CLI_RS13800 IPR003327 Leucine zipper, Myc CLI_RS13805 IPR002509 Polysaccharide deacetylase CLI_RS13805 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS13810 IPR011042 Six-bladed beta-propeller, TolB-like CLI_RS13810 IPR032485 CLI_RS13810 CLI_RS13815 IPR001509 NAD-dependent epimerase/dehydratase, N-terminal domain CLI_RS13815 IPR005886 UDP-glucose 4-epimerase GalE CLI_RS13815 IPR016040 NAD(P)-binding domain CLI_RS13820 IPR001226 Flavodoxin, conserved site CLI_RS13820 IPR008254 Flavodoxin/nitric oxide synthase CLI_RS13820 IPR010087 Flavodoxin, short chain CLI_RS13820 IPR029039 Flavoprotein-like CLI_RS13825 IPR002528 Multi antimicrobial extrusion protein CLI_RS13830 IPR000514 Glycoside hydrolase, family 39 CLI_RS13830 IPR009057 Homeodomain-like CLI_RS13830 IPR011051 RmlC-like cupin domain CLI_RS13830 IPR013096 Cupin 2, conserved barrel CLI_RS13830 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS13830 IPR014710 RmlC-like jelly roll fold CLI_RS13830 IPR017853 Glycoside hydrolase, superfamily CLI_RS13830 IPR018060 DNA binding HTH domain, AraC-type CLI_RS13830 IPR018062 HTH domain AraC-type, conserved site CLI_RS13830 IPR020449 Transcription regulator HTH, AraC- type CLI_RS13835 IPR003507 Muramoyl-tetrapeptide carboxypeptidase CLI_RS13835 IPR027461 LD-carboxypeptidase A, C-terminal domain CLI_RS13835 IPR027478 Murein tetrapeptide carboxypeptidase, N-terminal domain CLI_RS13835 IPR029062 Class I glutamine amidotransferase-like CLI_RS13840 IPR000577 CLI_RS13840 CLI_RS13840 IPR005999 Glycerol kinase CLI_RS13840 IPR018483 Carbohydrate kinase, FGGY, conserved site CLI_RS13840 IPR018484 Carbohydrate kinase, FGGY, N-terminal CLI_RS13840 IPR018485 Carbohydrate kinase, FGGY, C-terminal CLI_RS13845 IPR000425 Major intrinsic protein CLI_RS13845 IPR022357 Major intrinsic protein, conserved site CLI_RS13845 IPR023271 Aquaporin-like CLI_RS13850 IPR002765 Uncharacterised protein family UPF0145 CLI_RS13855 IPR006976 VanZ-like CLI_RS13865 IPR003439 ABC transporter-like CLI_RS13865 IPR003593 AAA+ ATPase domain CLI_RS13865 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13870 IPR000524 Transcription regulator HTH, GntR CLI_RS13870 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS13875 IPR006976 VanZ-like CLI_RS13880 IPR004137 Hydroxylamine reductase/Ni-containing CO dehydrogenase CLI_RS13880 IPR010048 Hydroxylamine reductase CLI_RS13880 IPR011254 Prismane-like CLI_RS13880 IPR016099 Prismane-like, alpha/beta-sandwich CLI_RS13880 IPR016100 Prismane, alpha-bundle CLI_RS13890 IPR000787 Peptidase M29, aminopeptidase II CLI_RS13895 IPR008844 Spore germination GerAC CLI_RS13900 IPR004761 Spore germination GerAB CLI_RS13905 IPR004995 Bacillus/Clostridium Ger spore germination protein CLI_RS13915 IPR029062 Class I glutamine amidotransferase-like CLI_RS13920 IPR001852 Pyridoxine biosynthesis protein CLI_RS13920 IPR011060 Ribulose-phosphate binding barrel CLI_RS13920 IPR013785 Aldolase-type TIM barrel CLI_RS13925 IPR002509 Polysaccharide deacetylase CLI_RS13925 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS13930 IPR000629 RNA helicase, ATP-dependent, DEAD-box, conserved site CLI_RS13930 IPR001650 Helicase, C-terminal CLI_RS13930 IPR005580 DbpA, RNA-binding CLI_RS13930 IPR011545 DEAD/DEAH box helicase domain CLI_RS13930 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS13930 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS13930 IPR030880 CLI_RS13930 CLI_RS13935 IPR025306 Probable zinc-binding domain CLI_RS13945 IPR003660 HAMP linker domain CLI_RS13945 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS13945 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS13945 IPR029151 Periplasmic sensor domain-like CLI_RS13945 IPR033463 CLI_RS13945 CLI_RS13950 IPR006015 Universal stress protein A CLI_RS13950 IPR006016 UspA CLI_RS13950 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS13955 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS13955 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS13960 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS13960 IPR015868 Glutaminase CLI_RS13965 IPR009009 RlpA-like double-psi beta-barrel domain CLI_RS13965 IPR010611 3D domain CLI_RS13970 IPR024418 Protein of unknown function DUF3862 CLI_RS13975 IPR003660 HAMP linker domain CLI_RS13975 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS13975 IPR029151 Periplasmic sensor domain-like CLI_RS13975 IPR033479 CLI_RS13975 CLI_RS13980 IPR008875 TraX CLI_RS13985 IPR000358 Ribonucleotide reductase small subunit CLI_RS13985 IPR009078 Ferritin-like superfamily CLI_RS13985 IPR012348 Ribonucleotide reductase-related CLI_RS13990 IPR000788 Ribonucleotide reductase large subunit, C-terminal CLI_RS13990 IPR005144 ATP-cone CLI_RS13990 IPR008926 Ribonucleotide reductase R1 subunit, N-terminal CLI_RS13990 IPR013346 Ribonucleotide reductase, class I , alpha subunit CLI_RS13990 IPR013509 Ribonucleotide reductase large subunit, N-terminal CLI_RS14000 IPR024301 Putative amidase domain CLI_RS14005 IPR009045 Hedgehog signalling/DD-peptidase zinc-binding domain CLI_RS14010 IPR001126 DNA-repair protein, UmuC-like CLI_RS14010 IPR017961 DNA polymerase, Y-family, little finger domain CLI_RS14010 IPR022880 DNA polymerase IV CLI_RS14010 IPR024728 DNA polymerase type-Y, HhH motif CLI_RS14015 IPR005720 Dihydroorotate dehydrogenase domain CLI_RS14015 IPR013785 Aldolase-type TIM barrel CLI_RS14015 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS14020 IPR009051 Alpha-helical ferredoxin CLI_RS14020 IPR016040 NAD(P)-binding domain CLI_RS14020 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS14020 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS14025 IPR000836 Phosphoribosyltransferase domain CLI_RS14025 IPR023050 Bifunctional protein PyrR CLI_RS14025 IPR029057 Phosphoribosyltransferase-like CLI_RS14030 IPR003848 Domain of unknown function DUF218 CLI_RS14030 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14040 IPR000835 MarR-type HTH domain CLI_RS14040 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14045 IPR003439 ABC transporter-like CLI_RS14045 IPR003593 AAA+ ATPase domain CLI_RS14045 IPR017871 ABC transporter, conserved site CLI_RS14045 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14055 IPR004175 2',5' RNA ligase CLI_RS14055 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLI_RS14060 IPR005085 Carbohydrate binding module family 25 CLI_RS14065 IPR003660 HAMP linker domain CLI_RS14065 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS14065 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS14065 IPR024478 4HB MCP domain CLI_RS14070 IPR000086 NUDIX hydrolase domain CLI_RS14070 IPR015797 NUDIX hydrolase domain-like CLI_RS14070 IPR020084 NUDIX hydrolase, conserved site CLI_RS14070 IPR020476 NUDIX hydrolase CLI_RS14075 IPR002481 Ferric-uptake regulator CLI_RS14075 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14080 IPR013540 Chitinase A N-terminal CLI_RS14080 IPR013783 Immunoglobulin-like fold CLI_RS14080 IPR014756 Immunoglobulin E-set CLI_RS14085 IPR001223 Glycoside hydrolase, family 18, catalytic domain CLI_RS14085 IPR011583 Chitinase II CLI_RS14085 IPR013540 Chitinase A N-terminal CLI_RS14085 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS14085 IPR013783 Immunoglobulin-like fold CLI_RS14085 IPR014756 Immunoglobulin E-set CLI_RS14085 IPR017853 Glycoside hydrolase, superfamily CLI_RS14085 IPR029070 Chitinase insertion domain CLI_RS14090 IPR004547 Glucosamine-6-phosphate isomerase CLI_RS14090 IPR006148 Glucosamine/galactosamine-6-phosphate isomerase CLI_RS14090 IPR018321 Glucosamine-6-phosphate isomerase, conserved site CLI_RS14095 IPR003764 N-acetylglucosamine-6-phosphate deacetylase CLI_RS14095 IPR006680 Amidohydrolase 1 CLI_RS14095 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS14095 IPR032466 CLI_RS14095 CLI_RS14100 IPR000524 Transcription regulator HTH, GntR CLI_RS14100 IPR011663 UbiC transcription regulator-associated CLI_RS14100 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14100 IPR028978 Chorismate pyruvate-lyase/UbiC transcription regulator-associated domain CLI_RS14105 IPR002372 Pyrrolo-quinoline quinone repeat CLI_RS14105 IPR011047 Quinonprotein alcohol dehydrogenase-like superfamily CLI_RS14105 IPR015943 WD40/YVTN repeat-like-containing domain CLI_RS14115 IPR004341 CAT RNA-binding domain CLI_RS14115 IPR011608 PRD domain CLI_RS14120 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS14120 IPR011055 Duplicated hybrid motif CLI_RS14125 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS14125 IPR003352 Phosphotransferase system, EIIC CLI_RS14125 IPR010974 Phosphotransferase system, N-acetylglucosamine-specific IIBC component CLI_RS14125 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS14130 IPR002528 Multi antimicrobial extrusion protein CLI_RS14135 IPR002528 Multi antimicrobial extrusion protein CLI_RS14140 IPR001226 Flavodoxin, conserved site CLI_RS14140 IPR001279 Beta-lactamase-like CLI_RS14140 IPR008254 Flavodoxin/nitric oxide synthase CLI_RS14140 IPR016440 Rubredoxin-oxygen oxidoreductase CLI_RS14140 IPR029039 Flavoprotein-like CLI_RS14145 IPR006089 Acyl-CoA dehydrogenase, conserved site CLI_RS14145 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLI_RS14145 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLI_RS14145 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLI_RS14145 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLI_RS14150 IPR001584 Integrase, catalytic core CLI_RS14150 IPR012337 Ribonuclease H-like domain CLI_RS14150 IPR025948 HTH-like domain CLI_RS14155 IPR004165 Coenzyme A transferase family I CLI_RS14155 IPR012792 3-oxoacid CoA-transferase, subunit A CLI_RS14160 IPR004165 Coenzyme A transferase family I CLI_RS14160 IPR012791 3-oxoacid CoA-transferase, subunit B CLI_RS14165 IPR025877 MobA-like NTP transferase domain CLI_RS14165 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14170 IPR001041 2Fe-2S ferredoxin-type domain CLI_RS14170 IPR002888 [2Fe-2S]-binding CLI_RS14170 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLI_RS14170 IPR012675 Beta-grasp domain CLI_RS14175 IPR002346 Molybdopterin dehydrogenase, FAD-binding CLI_RS14175 IPR005107 CO dehydrogenase flavoprotein, C-terminal CLI_RS14175 IPR016166 FAD-binding, type 2 CLI_RS14175 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS14175 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS14180 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14180 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLI_RS14185 IPR001127 Phosphotransferase system, sugar-specific permease EIIA type 1 CLI_RS14185 IPR001996 Phosphotransferase system, IIB component, type 1 CLI_RS14185 IPR003352 Phosphotransferase system, EIIC CLI_RS14185 IPR011055 Duplicated hybrid motif CLI_RS14185 IPR011297 Phosphotransferase system, beta-glucoside-specific IIABC component CLI_RS14185 IPR018113 Phosphotransferase system EIIB, cysteine phosphorylation site CLI_RS14190 IPR001360 Glycoside hydrolase, family 1 CLI_RS14190 IPR013781 Glycoside hydrolase, catalytic domain CLI_RS14190 IPR017853 Glycoside hydrolase, superfamily CLI_RS14190 IPR018120 Glycoside hydrolase, family 1, active site CLI_RS14190 IPR033132 CLI_RS14190 CLI_RS14195 IPR004341 CAT RNA-binding domain CLI_RS14195 IPR011608 PRD domain CLI_RS14200 IPR006153 Cation/H+ exchanger CLI_RS14205 IPR006439 HAD hydrolase, subfamily IA CLI_RS14205 IPR023198 Phosphoglycolate phosphatase, domain 2 CLI_RS14205 IPR023214 HAD-like domain CLI_RS14210 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLI_RS14210 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria CLI_RS14210 IPR015510 Peptidoglycan recognition protein CLI_RS14215 IPR004383 Ribosomal RNA large subunit methyltransferase RlmN/Cfr CLI_RS14215 IPR007197 Radical SAM CLI_RS14215 IPR022881 Ribosomal RNA large subunit methyltransferase, Cfr CLI_RS14220 IPR003439 ABC transporter-like CLI_RS14220 IPR003593 AAA+ ATPase domain CLI_RS14220 IPR017871 ABC transporter, conserved site CLI_RS14220 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14225 IPR003651 Endonuclease III-like, iron-sulphur cluster loop motif CLI_RS14225 IPR004035 Endonuclease III, iron-sulphur binding site CLI_RS14225 IPR011257 DNA glycosylase CLI_RS14225 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLI_RS14230 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS14235 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CLI_RS14235 IPR002792 TRAM domain CLI_RS14235 IPR010280 (Uracil-5)-methyltransferase family CLI_RS14235 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14235 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS14235 IPR030390 CLI_RS14235 CLI_RS14235 IPR030391 CLI_RS14235 CLI_RS14245 IPR000917 Sulfatase CLI_RS14245 IPR012160 Membrane sulfatase, HI1246-related CLI_RS14245 IPR017849 Alkaline phosphatase-like, alpha/beta/alpha CLI_RS14245 IPR017850 Alkaline-phosphatase-like, core domain CLI_RS14250 IPR002781 Transmembrane protein TauE like CLI_RS14255 IPR002180 6,7-dimethyl-8-ribityllumazine synthase CLI_RS14260 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CLI_RS14260 IPR000926 GTP cyclohydrolase II, RibA CLI_RS14260 IPR016299 Riboflavin biosynthesis protein RibBA CLI_RS14260 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS14260 IPR032677 CLI_RS14260 CLI_RS14265 IPR001783 Lumazine-binding protein CLI_RS14265 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS14265 IPR023366 ATP synthase subunit alpha-like domain CLI_RS14265 IPR026017 Lumazine-binding domain CLI_RS14270 IPR002125 CMP/dCMP deaminase, zinc-binding CLI_RS14270 IPR002734 Bacterial bifunctional deaminase-reductase, C-terminal CLI_RS14270 IPR004794 Riboflavin biosynthesis protein RibD CLI_RS14270 IPR011549 Riboflavin-specific deaminase, C-terminal CLI_RS14270 IPR016192 APOBEC/CMP deaminase, zinc-binding CLI_RS14270 IPR016193 Cytidine deaminase-like CLI_RS14270 IPR024072 Dihydrofolate reductase-like domain CLI_RS14275 IPR001160 Peptidase M20C, Xaa-His dipeptidase CLI_RS14275 IPR002933 Peptidase M20 CLI_RS14275 IPR011650 Peptidase M20, dimerisation domain CLI_RS14280 IPR001279 Beta-lactamase-like CLI_RS14285 IPR001757 Cation-transporting P-type ATPase CLI_RS14285 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS14285 IPR006415 Magnesium-transporting P-type ATPase, subfamily IIIB CLI_RS14285 IPR008250 P-type ATPase, A domain CLI_RS14285 IPR018303 P-type ATPase, phosphorylation site CLI_RS14285 IPR023214 HAD-like domain CLI_RS14285 IPR023298 P-type ATPase, transmembrane domain CLI_RS14285 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS14295 IPR004761 Spore germination GerAB CLI_RS14300 IPR004995 Bacillus/Clostridium Ger spore germination protein CLI_RS14305 IPR008844 Spore germination GerAC CLI_RS14310 IPR000115 Phosphoribosylglycinamide synthetase CLI_RS14310 IPR011054 Rudiment single hybrid motif CLI_RS14310 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS14310 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS14310 IPR016185 Pre-ATP-grasp domain CLI_RS14310 IPR020560 Phosphoribosylglycinamide synthetase, C-domain CLI_RS14310 IPR020561 Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain CLI_RS14310 IPR020562 Phosphoribosylglycinamide synthetase, N-terminal CLI_RS14315 IPR002695 AICARFT/IMPCHase bienzyme CLI_RS14315 IPR011607 Methylglyoxal synthase-like domain CLI_RS14315 IPR016193 Cytidine deaminase-like CLI_RS14315 IPR024051 AICAR transformylase domain CLI_RS14320 IPR002376 Formyl transferase, N-terminal CLI_RS14320 IPR004607 Phosphoribosylglycinamide formyltransferase CLI_RS14325 IPR004733 Phosphoribosylformylglycinamidine cyclo-ligase CLI_RS14325 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14325 IPR016188 PurM, N-terminal-like CLI_RS14330 IPR000836 Phosphoribosyltransferase domain CLI_RS14330 IPR005854 Amidophosphoribosyl transferase CLI_RS14330 IPR017932 Glutamine amidotransferase type 2 domain CLI_RS14330 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS14330 IPR029057 Phosphoribosyltransferase-like CLI_RS14335 IPR001636 Phosphoribosylaminoimidazole-succinocarboxamide synthase CLI_RS14335 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS14335 IPR018236 SAICAR synthetase, conserved site CLI_RS14335 IPR028923 SAICAR synthetase/ADE2, N-terminal CLI_RS14340 IPR000031 Phosphoribosylaminoimidazole carboxylase PurE domain CLI_RS14340 IPR024694 N5-carboxyaminoimidazole ribonucleotide mutase PurE CLI_RS14350 IPR000674 Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead CLI_RS14350 IPR001041 2Fe-2S ferredoxin-type domain CLI_RS14350 IPR002888 [2Fe-2S]-binding CLI_RS14350 IPR006058 2Fe-2S ferredoxin, iron-sulphur binding site CLI_RS14350 IPR008274 Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding CLI_RS14350 IPR012675 Beta-grasp domain CLI_RS14350 IPR017697 Selenium-dependent molybdenum hydroxylase 1 CLI_RS14355 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLI_RS14355 IPR002933 Peptidase M20 CLI_RS14355 IPR011650 Peptidase M20, dimerisation domain CLI_RS14355 IPR017706 Peptidase M20/DapE, YgeY CLI_RS14360 IPR006680 Amidohydrolase 1 CLI_RS14360 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS14360 IPR017700 Putative selenium metabolism protein SsnA CLI_RS14360 IPR032466 CLI_RS14360 CLI_RS14365 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLI_RS14365 IPR009051 Alpha-helical ferredoxin CLI_RS14365 IPR013785 Aldolase-type TIM barrel CLI_RS14365 IPR017701 Putative selenate reductase YgfK CLI_RS14365 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS14365 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS14365 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS14370 IPR002082 Aspartate carbamoyltransferase CLI_RS14370 IPR006130 Aspartate/ornithine carbamoyltransferase CLI_RS14370 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLI_RS14370 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLI_RS14370 IPR017702 Putative carbamoyltransferase YgeW CLI_RS14375 IPR006680 Amidohydrolase 1 CLI_RS14375 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS14375 IPR011778 Hydantoinase/dihydropyrimidinase CLI_RS14375 IPR032466 CLI_RS14375 CLI_RS14380 IPR006042 Xanthine/uracil permease CLI_RS14380 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS14380 IPR017588 Xanthine permease CLI_RS14385 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS14385 IPR010081 Diaminopropionate ammonia-lyase CLI_RS14385 IPR019871 Diaminopropionate ammonia-lyase, subgroup CLI_RS14390 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS14390 IPR002197 DNA binding HTH domain, Fis-type CLI_RS14390 IPR003593 AAA+ ATPase domain CLI_RS14390 IPR009057 Homeodomain-like CLI_RS14390 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS14390 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS14390 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14390 IPR029016 GAF domain-like CLI_RS14395 IPR017587 Putative selenium-dependent hydroxylase accessory protein YqeC CLI_RS14400 IPR017696 Molybdenum hydroxylase accessory protein, YgfJ family CLI_RS14400 IPR025877 MobA-like NTP transferase domain CLI_RS14400 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS14405 IPR017695 Selenium-dependent molybdenum hydroxylase system protein, YqeB family CLI_RS14410 IPR003777 XdhC- CoxI CLI_RS14410 IPR027051 XdhC Rossmann domain CLI_RS14415 IPR004948 Nucleoside-triphosphatase, THEP1 type CLI_RS14415 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14420 IPR000522 ABC transporter, permease protein CLI_RS14420 IPR029022 ABC transporter, BtuC-like CLI_RS14425 IPR003439 ABC transporter-like CLI_RS14425 IPR003593 AAA+ ATPase domain CLI_RS14425 IPR017871 ABC transporter, conserved site CLI_RS14425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14430 IPR002491 ABC transporter periplasmic binding domain CLI_RS14440 IPR013830 CLI_RS14440 CLI_RS14445 IPR003848 Domain of unknown function DUF218 CLI_RS14445 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14450 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS14450 IPR026033 Purine permease PbuG-like CLI_RS14450 IPR029940 CLI_RS14450 CLI_RS14455 IPR001463 Sodium:alanine symporter CLI_RS14460 IPR000212 DNA helicase, UvrD/REP type CLI_RS14460 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14465 IPR002085 Alcohol dehydrogenase superfamily, zinc-type CLI_RS14465 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLI_RS14465 IPR011032 GroES (chaperonin 10)-like CLI_RS14465 IPR013149 Alcohol dehydrogenase, C-terminal CLI_RS14465 IPR013154 Alcohol dehydrogenase GroES-like CLI_RS14465 IPR016040 NAD(P)-binding domain CLI_RS14465 IPR020843 Polyketide synthase, enoylreductase CLI_RS14470 IPR000014 PAS domain CLI_RS14470 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS14470 IPR002197 DNA binding HTH domain, Fis-type CLI_RS14470 IPR003593 AAA+ ATPase domain CLI_RS14470 IPR009057 Homeodomain-like CLI_RS14470 IPR013767 PAS fold CLI_RS14470 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS14470 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS14470 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14475 IPR004506 tRNA-specific 2-thiouridylase CLI_RS14475 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14475 IPR023382 Adenine nucleotide alpha hydrolase-like domains CLI_RS14480 IPR002933 Peptidase M20 CLI_RS14480 IPR012166 Uncharacterised protein family RocB CLI_RS14485 IPR000614 Free Met sulfoxide reductase conserved site CLI_RS14485 IPR029016 GAF domain-like CLI_RS14490 IPR000644 CBS domain CLI_RS14490 IPR002550 Domain of unknown function DUF21 CLI_RS14490 IPR005170 Transporter-associated domain CLI_RS14490 IPR016166 FAD-binding, type 2 CLI_RS14490 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS14495 IPR002767 Protein of unknown function DUF77 CLI_RS14495 IPR029756 MTH1187/YkoF-like CLI_RS14500 IPR002817 Thiamine biosynthesis protein ThiC CLI_RS14505 IPR000836 Phosphoribosyltransferase domain CLI_RS14505 IPR005854 Amidophosphoribosyl transferase CLI_RS14505 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS14505 IPR029057 Phosphoribosyltransferase-like CLI_RS14510 IPR007546 Protein of unknown function DUF503 CLI_RS14515 IPR025699 ABC-2 membrane transporter-like CLI_RS14520 IPR025699 ABC-2 membrane transporter-like CLI_RS14525 IPR003439 ABC transporter-like CLI_RS14525 IPR003593 AAA+ ATPase domain CLI_RS14525 IPR017871 ABC transporter, conserved site CLI_RS14525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14530 IPR000524 Transcription regulator HTH, GntR CLI_RS14530 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14535 IPR031360 CLI_RS14535 CLI_RS14540 IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB CLI_RS14540 IPR017945 DHBP synthase RibB-like alpha/beta domain CLI_RS14545 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS14550 IPR000595 Cyclic nucleotide-binding domain CLI_RS14550 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14550 IPR012318 Helix-turn-helix motif, Crp-type CLI_RS14550 IPR014710 RmlC-like jelly roll fold CLI_RS14550 IPR018490 Cyclic nucleotide-binding-like CLI_RS14555 IPR011105 Cell wall hydrolase, SleB CLI_RS14565 IPR011051 RmlC-like cupin domain CLI_RS14565 IPR013096 Cupin 2, conserved barrel CLI_RS14565 IPR014710 RmlC-like jelly roll fold CLI_RS14570 IPR017500 Phage infection protein, YhgE, N-terminal CLI_RS14570 IPR017501 Phage infection protein, YhgE, C-terminal CLI_RS14575 IPR004129 Glycerophosphoryl diester phosphodiesterase CLI_RS14575 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLI_RS14575 IPR030395 CLI_RS14575 CLI_RS14580 IPR011990 Tetratricopeptide-like helical domain CLI_RS14585 IPR002129 Pyridoxal phosphate-dependent decarboxylase CLI_RS14585 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS14585 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS14590 IPR000644 CBS domain CLI_RS14590 IPR002550 Domain of unknown function DUF21 CLI_RS14590 IPR005170 Transporter-associated domain CLI_RS14590 IPR016166 FAD-binding, type 2 CLI_RS14590 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS14595 IPR003743 Protein of unknown function DUF164 CLI_RS14600 IPR002678 GTP cyclohydrolase 1 type 2/Nif3 CLI_RS14605 IPR006901 tRNA methyltransferase TrmK CLI_RS14605 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS14610 IPR020482 Uncharacterised protein family CAC1301 CLI_RS14610 IPR027783 Bacterial Pleckstrin homology domain-related CLI_RS14615 IPR000943 RNA polymerase sigma-70 CLI_RS14615 IPR007127 RNA polymerase sigma factor 70, region 1.1 CLI_RS14615 IPR007624 RNA polymerase sigma-70 region 3 CLI_RS14615 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS14615 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS14615 IPR009042 RNA polymerase sigma-70 region 1.2 CLI_RS14615 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14615 IPR012760 RNA polymerase sigma factor RpoD, C-terminal CLI_RS14615 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS14615 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS14615 IPR014284 RNA polymerase sigma-70 like domain CLI_RS14615 IPR028630 RNA polymerase sigma factor RpoD CLI_RS14620 IPR002694 Zinc finger, CHC2-type CLI_RS14620 IPR006171 Toprim domain CLI_RS14620 IPR006295 DNA primase, DnaG CLI_RS14620 IPR007693 DNA helicase, DnaB-like, N-terminal CLI_RS14620 IPR013264 DNA primase, catalytic core, N-terminal CLI_RS14620 IPR019475 DNA primase, DnaB-helicase binding domain CLI_RS14620 IPR030846 CLI_RS14620 CLI_RS14625 IPR003607 HD/PDEase domain CLI_RS14625 IPR006261 Deoxyguanosinetriphosphate triphosphohydrolase CLI_RS14625 IPR006674 HD domain CLI_RS14625 IPR026875 Phosphohydrolase-associated domain CLI_RS14630 IPR002575 Aminoglycoside phosphotransferase CLI_RS14630 IPR011009 Protein kinase-like domain CLI_RS14630 IPR014255 Spore coat protein CotS CLI_RS14635 IPR000121 PEP-utilising enzyme, C-terminal CLI_RS14635 IPR002192 Pyruvate phosphate dikinase, PEP/pyruvate-binding CLI_RS14635 IPR008279 PEP-utilising enzyme, mobile domain CLI_RS14635 IPR010121 Pyruvate, phosphate dikinase CLI_RS14635 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS14635 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS14635 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLI_RS14635 IPR018274 PEP-utilising enzyme, active site CLI_RS14635 IPR023151 PEP-utilising enzyme, conserved site CLI_RS14640 IPR000644 CBS domain CLI_RS14640 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14640 IPR013196 Helix-turn-helix, type 11 CLI_RS14640 IPR016842 Protein of unknown function UCP026546, HtH-CBS CLI_RS14645 IPR009060 UBA-like CLI_RS14645 IPR025642 Domain of unknown function DUF4342 CLI_RS14650 IPR003717 Recombination protein O, RecO CLI_RS14650 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14650 IPR022572 DNA replication/recombination mediator RecO, N-terminal CLI_RS14655 IPR004044 K Homology domain, type 2 CLI_RS14655 IPR005225 Small GTP-binding protein domain CLI_RS14655 IPR005662 GTP-binding protein Era CLI_RS14655 IPR006073 GTP binding domain CLI_RS14655 IPR009019 K homology domain, prokaryotic type CLI_RS14655 IPR015946 K homology domain-like, alpha/beta CLI_RS14655 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14660 IPR002125 CMP/dCMP deaminase, zinc-binding CLI_RS14660 IPR006262 Cytidine deaminase, homotetrameric CLI_RS14660 IPR016192 APOBEC/CMP deaminase, zinc-binding CLI_RS14660 IPR016193 Cytidine deaminase-like CLI_RS14665 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS14665 IPR000829 Diacylglycerol kinase, prokaryotic CLI_RS14670 IPR002036 Endoribonuclease YbeY CLI_RS14670 IPR020549 Endoribonuclease YbeY, conserved site CLI_RS14670 IPR023091 Metalloprotease catalytic domain, predicted CLI_RS14675 IPR003607 HD/PDEase domain CLI_RS14675 IPR006674 HD domain CLI_RS14675 IPR006675 Uncharacterised domain HDIG CLI_RS14675 IPR011621 Metal-dependent phosphohydrolase, 7TM intracellular domain CLI_RS14675 IPR011624 Metal-dependent phosphohydrolase, 7TM extracellular domain CLI_RS14680 IPR010690 Putative stage IV sporulation YqfD CLI_RS14685 IPR022476 Sporulation protein YabP/YqfC CLI_RS14685 IPR022477 Sporulation protein YqfC CLI_RS14690 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related CLI_RS14690 IPR019004 Uncharacterised domain YOR215C, mitochondrial CLI_RS14690 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLI_RS14695 IPR001911 Ribosomal protein S21 CLI_RS14695 IPR018278 Ribosomal protein S21, conserved site CLI_RS14700 IPR001310 Histidine triad (HIT) protein CLI_RS14700 IPR011146 HIT-like domain CLI_RS14700 IPR019808 Histidine triad, conserved site CLI_RS14705 IPR005839 Methylthiotransferase CLI_RS14705 IPR006467 MiaB-like tRNA modifying enzyme CLI_RS14705 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS14705 IPR007197 Radical SAM CLI_RS14705 IPR013848 Methylthiotransferase, N-terminal CLI_RS14705 IPR020612 Methylthiotransferase, conserved site CLI_RS14705 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS14705 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS14710 IPR006700 Ribosomal RNA small subunit methyltransferase E CLI_RS14710 IPR015947 PUA-like domain CLI_RS14710 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS14710 IPR029028 Alpha/beta knot methyltransferases CLI_RS14715 IPR004498 Ribosomal protein L11 methyltransferase CLI_RS14715 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS14720 IPR001305 Heat shock protein DnaJ, cysteine-rich domain CLI_RS14720 IPR001623 DnaJ domain CLI_RS14720 IPR002939 Chaperone DnaJ, C-terminal CLI_RS14720 IPR008971 HSP40/DnaJ peptide-binding CLI_RS14720 IPR012724 Chaperone DnaJ CLI_RS14720 IPR018253 DnaJ domain, conserved site CLI_RS14725 IPR012725 Chaperone DnaK CLI_RS14725 IPR013126 Heat shock protein 70 family CLI_RS14725 IPR018181 Heat shock protein 70, conserved site CLI_RS14725 IPR029047 Heat shock protein 70kD, peptide-binding domain CLI_RS14725 IPR029048 Heat shock protein 70kD, C-terminal domain CLI_RS14730 IPR000740 GrpE nucleotide exchange factor CLI_RS14730 IPR009012 GrpE nucleotide exchange factor, head CLI_RS14730 IPR013805 GrpE nucleotide exchange factor, coiled-coil CLI_RS14735 IPR002571 Heat-inducible transcription repressor HrcA CLI_RS14735 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14735 IPR013196 Helix-turn-helix, type 11 CLI_RS14735 IPR021153 Heat-inducible transcription repressor HrcA, C-terminal CLI_RS14735 IPR029016 GAF domain-like CLI_RS14740 IPR004559 Coproporphyrinogen III oxidase, oxygen-independent related CLI_RS14740 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS14740 IPR007197 Radical SAM CLI_RS14740 IPR010723 HemN, C-terminal domain CLI_RS14740 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS14745 IPR000640 Translation elongation factor EFG, V domain CLI_RS14745 IPR000795 Elongation factor, GTP-binding domain CLI_RS14745 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS14745 IPR005225 Small GTP-binding protein domain CLI_RS14745 IPR006297 Elongation factor 4 CLI_RS14745 IPR009022 Elongation factor G, III-V domain CLI_RS14745 IPR013842 GTP-binding protein LepA, C-terminal CLI_RS14745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14745 IPR031157 CLI_RS14745 CLI_RS14755 IPR010897 Sporulation stage II, protein P CLI_RS14760 IPR005080 Peptidase A25, germination protease CLI_RS14760 IPR023430 Peptidase HybD-like domain CLI_RS14765 IPR002583 Ribosomal protein S20 CLI_RS14770 IPR005790 DNA polymerase III, delta subunit CLI_RS14770 IPR008921 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal CLI_RS14770 IPR010372 DNA polymerase III, delta CLI_RS14770 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14775 IPR004477 ComEC/Rec2-related protein CLI_RS14785 IPR004014 Cation-transporting P-type ATPase, N-terminal CLI_RS14785 IPR008250 P-type ATPase, A domain CLI_RS14785 IPR023214 HAD-like domain CLI_RS14785 IPR023299 P-type ATPase, cytoplasmic domain N CLI_RS14790 IPR011435 Protein of unknown function DUF1538 CLI_RS14800 IPR000795 Elongation factor, GTP-binding domain CLI_RS14800 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS14800 IPR004535 Translation elongation factor, selenocysteine-specific CLI_RS14800 IPR005225 Small GTP-binding protein domain CLI_RS14800 IPR009000 Translation protein, beta-barrel domain CLI_RS14800 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLI_RS14800 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS14800 IPR015190 Translation elongation factor SelB, winged helix, type 2 CLI_RS14800 IPR015191 Translation elongation factor SelB, winged helix, type 3 CLI_RS14800 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14800 IPR031157 CLI_RS14800 CLI_RS14805 IPR004534 L-seryl-tRNA selenium transferase CLI_RS14805 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS14805 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS14805 IPR018319 L-seryl-tRNA selenium transferase-like CLI_RS14805 IPR025862 L-seryl-tRNA selenium transferase N-terminal domain CLI_RS14810 IPR004536 Selenide water dikinase CLI_RS14810 IPR010918 AIR synthase-related protein, C-terminal domain CLI_RS14810 IPR016188 PurM, N-terminal-like CLI_RS14810 IPR023061 Selenide, water dikinase, class I CLI_RS14815 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLI_RS14815 IPR004509 Competence protein ComEA, helix-hairpin-helix domain CLI_RS14815 IPR010994 RuvA domain 2-like CLI_RS14815 IPR019554 Soluble ligand binding domain CLI_RS14820 IPR001967 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A, N-terminal CLI_RS14820 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14820 IPR012907 Peptidase S11, D-Ala-D-Ala carboxypeptidase A, C-terminal CLI_RS14820 IPR018044 Peptidase S11, D-alanyl-D-alanine carboxypeptidase A CLI_RS14825 IPR002942 RNA-binding S4 domain CLI_RS14825 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLI_RS14825 IPR006225 Pseudouridine synthase, RluC/RluD CLI_RS14825 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS14830 IPR006056 Enamine/imine deaminase YjgF-like CLI_RS14830 IPR006175 YjgF/Yer057p/UK114 family CLI_RS14830 IPR013813 Endoribonuclease L-PSP/chorismate mutase-like CLI_RS14830 IPR019897 YjgF-like protein, conserved site CLI_RS14835 IPR004474 Cell envelope-related transcriptional attenuator domain CLI_RS14835 IPR027381 Putative LytR/CpsA/Psr regulator, C-terminal domain CLI_RS14840 IPR003607 HD/PDEase domain CLI_RS14840 IPR005249 Conserved hypothetical protein CHP00488 CLI_RS14840 IPR006674 HD domain CLI_RS14840 IPR006675 Uncharacterised domain HDIG CLI_RS14845 IPR004821 Cytidyltransferase-like domain CLI_RS14845 IPR005248 Probable nicotinate-nucleotide adenylyltransferase CLI_RS14845 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS14850 IPR001890 RNA-binding, CRM domain CLI_RS14850 IPR017924 RNA-binding protein YhbY CLI_RS14855 IPR005225 Small GTP-binding protein domain CLI_RS14855 IPR006073 GTP binding domain CLI_RS14855 IPR006074 GTP1/OBG, conserved site CLI_RS14855 IPR006169 GTP1/OBG domain CLI_RS14855 IPR014100 GTP-binding protein Obg/CgtA CLI_RS14855 IPR015349 GTP-binding protein OBG, C-terminal CLI_RS14855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14860 IPR001684 Ribosomal protein L27 CLI_RS14860 IPR018261 Ribosomal protein L27, conserved site CLI_RS14865 IPR007422 Protein of unknown function DUF464 CLI_RS14870 IPR001787 Ribosomal protein L21 CLI_RS14870 IPR018258 Ribosomal protein L21, conserved site CLI_RS14870 IPR028909 Ribosomal protein L21-like CLI_RS14875 IPR004659 Ribonuclease E/G CLI_RS14875 IPR012340 Nucleic acid-binding, OB-fold CLI_RS14875 IPR019307 RNA-binding protein AU-1/Ribonuclease E/G CLI_RS14875 IPR022967 RNA-binding domain, S1 CLI_RS14880 IPR018768 Domain of unknown function DUF2344 CLI_RS14885 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS14885 IPR007197 Radical SAM CLI_RS14885 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS14885 IPR023862 Conserved hypothetical protein CHP03960, radical SAM CLI_RS14885 IPR023970 Methylthiotransferase/radical SAM-type protein CLI_RS14895 IPR011055 Duplicated hybrid motif CLI_RS14895 IPR016047 Peptidase M23 CLI_RS14900 IPR001182 Cell cycle protein FtsW/RodA CLI_RS14900 IPR011923 Rod shape-determining protein RodA CLI_RS14900 IPR018365 Cell cycle, FtsW / RodA / SpoVE, conserved site CLI_RS14905 IPR005527 Septum formation topological specificity factor MinE CLI_RS14910 IPR002586 CobQ/CobB/MinD/ParA nucleotide binding domain CLI_RS14910 IPR010223 ATP binding protein MinD, bacterial-type CLI_RS14910 IPR025501 ATP binding protein MinD CLI_RS14910 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14915 IPR005526 Septum formation inhibitor MinC, C-terminal CLI_RS14915 IPR013033 Septum formation inhibitor MinC CLI_RS14915 IPR016098 Cyclase-associated protein CAP/septum formation inhibitor MinC, C-terminal CLI_RS14920 IPR001460 Penicillin-binding protein, transpeptidase CLI_RS14920 IPR005311 Penicillin-binding protein, dimerisation domain CLI_RS14920 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS14925 IPR007227 Cell shape-determining protein MreD CLI_RS14925 IPR017225 Cell shape-determining protein MreD, predicted CLI_RS14930 IPR007221 Rod shape-determining protein MreC CLI_RS14935 IPR004753 Cell shape determining protein MreB/Mrl CLI_RS14940 IPR001405 RadC protein CLI_RS14940 IPR010994 RuvA domain 2-like CLI_RS14940 IPR020891 Uncharacterised protein family UPF0758, conserved site CLI_RS14940 IPR025657 RadC-like JAB domain CLI_RS14945 IPR003697 Maf-like protein CLI_RS14945 IPR029001 Inosine triphosphate pyrophosphatase-like CLI_RS14950 IPR025470 Protein of unknown function DUF4321 CLI_RS14960 IPR016181 Acyl-CoA N-acyltransferase CLI_RS14965 IPR003719 Phenazine biosynthesis PhzF protein CLI_RS14970 IPR008310 UPF0735 ACT domain-containing protein CLI_RS14985 IPR008258 Lytic transglycosylase-like SLT domain CLI_RS14985 IPR023346 Lysozyme-like domain CLI_RS14990 IPR001977 Dephospho-CoA kinase CLI_RS14990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS14995 IPR001098 DNA-directed DNA polymerase, family A, palm domain CLI_RS14995 IPR002298 DNA polymerase A CLI_RS14995 IPR002421 5'-3' exonuclease, N-terminal CLI_RS14995 IPR002562 3'-5' exonuclease domain CLI_RS14995 IPR008918 Helix-hairpin-helix motif, class 2 CLI_RS14995 IPR012337 Ribonuclease H-like domain CLI_RS14995 IPR018320 DNA polymerase 1 CLI_RS14995 IPR019760 DNA-directed DNA polymerase, family A, conserved site CLI_RS14995 IPR020045 5'-3' exonuclease, C-terminal domain CLI_RS14995 IPR020046 5'-3' exonuclease, alpha-helical arch, N-terminal CLI_RS14995 IPR029060 PIN domain-like CLI_RS15000 IPR000453 Chorismate synthase CLI_RS15000 IPR020541 Chorismate synthase, conserved site CLI_RS15005 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS15005 IPR003646 SH3-like domain, bacterial-type CLI_RS15015 IPR019715 Haemolysin XhlA CLI_RS15025 IPR000421 Coagulation factor 5/8 C-terminal type domain CLI_RS15025 IPR008979 Galactose-binding domain-like CLI_RS15035 IPR008979 Galactose-binding domain-like CLI_RS15070 IPR018247 EF-Hand 1, calcium-binding site CLI_RS15070 IPR029030 Caspase-like domain CLI_RS15140 IPR002611 IstB-like ATP-binding protein CLI_RS15140 IPR003593 AAA+ ATPase domain CLI_RS15140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15145 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS15145 IPR010056 Phage replisome organiser, N-terminal domain CLI_RS15150 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS15150 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS15155 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS15155 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS15160 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS15160 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS15175 IPR004299 Membrane bound O-acyl transferase, MBOAT CLI_RS15175 IPR024194 Alginate O-acetyltransferase AlgI/D-alanyl transfer protein DltB CLI_RS15175 IPR028362 Alginate O-acetyltransferase AlgI CLI_RS15180 IPR013830 CLI_RS15180 CLI_RS15185 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS15185 IPR018126 Small acid-soluble spore protein, alpha/beta-type, conserved site CLI_RS15210 IPR007359 Positive regulator of sigma(E), RseC/MucC CLI_RS15210 IPR026268 Protein RseC CLI_RS15215 IPR002312 Aspartyl/Asparaginyl-tRNA synthetase, class IIb CLI_RS15215 IPR004115 GAD-like domain CLI_RS15215 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLI_RS15215 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLI_RS15215 IPR004524 Aspartate-tRNA ligase, class IIb, bacterial/mitochondrial-type CLI_RS15215 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15215 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like CLI_RS15215 IPR029351 GAD domain CLI_RS15220 IPR004154 Anticodon-binding CLI_RS15220 IPR004516 Histidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunit CLI_RS15220 IPR015807 Histidine-tRNA ligase CLI_RS15225 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS15225 IPR007197 Radical SAM CLI_RS15225 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS15225 IPR023995 Coproporphyrinogen III oxidase CLI_RS15230 IPR001279 Beta-lactamase-like CLI_RS15235 IPR003732 D-tyrosyl-tRNA(Tyr) deacylase CLI_RS15235 IPR023509 D-Tyr tRNAtyr deacylase-like domain CLI_RS15240 IPR002912 ACT domain CLI_RS15240 IPR003607 HD/PDEase domain CLI_RS15240 IPR004095 TGS CLI_RS15240 IPR004811 RelA/SpoT family CLI_RS15240 IPR007685 RelA/SpoT CLI_RS15240 IPR012675 Beta-grasp domain CLI_RS15240 IPR012676 TGS-like CLI_RS15245 IPR000836 Phosphoribosyltransferase domain CLI_RS15245 IPR005764 Adenine phosphoribosyl transferase CLI_RS15245 IPR029057 Phosphoribosyltransferase-like CLI_RS15250 IPR001667 DDH domain CLI_RS15255 IPR005665 Protein-export membrane protein SecF, bacterial CLI_RS15255 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15255 IPR022646 Protein-export membrane protein SecD/SecF/SecDF, conserved site CLI_RS15255 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLI_RS15260 IPR001036 Acriflavin resistance protein CLI_RS15260 IPR005791 Protein translocase subunit SecD CLI_RS15260 IPR022645 Protein-export membrane protein SecD/SecF, bacterial CLI_RS15260 IPR022813 Protein-export membrane protein SecD/SecF, archaeal and bacterial CLI_RS15265 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLI_RS15265 IPR007197 Radical SAM CLI_RS15265 IPR013785 Aldolase-type TIM barrel CLI_RS15265 IPR023885 4Fe4S-binding SPASM domain CLI_RS15265 IPR024025 SCIFF radical SAM maturase CLI_RS15270 IPR023975 Six-cysteine peptide SCIFF CLI_RS15275 IPR023804 Protein of unknown function DUF3792, transmembrane CLI_RS15280 IPR003849 Preprotein translocase YajC CLI_RS15285 IPR002616 tRNA-guanine(15) transglycosylase-like CLI_RS15285 IPR004803 Queuine tRNA-ribosyltransferase CLI_RS15290 IPR003699 S-adenosylmethionine:tRNA ribosyltransferase-isomerase, QueA CLI_RS15295 IPR003593 AAA+ ATPase domain CLI_RS15295 IPR004605 DNA helicase, Holliday junction RuvB type CLI_RS15295 IPR008823 DNA helicase, Holliday junction RuvB type, C-terminal CLI_RS15295 IPR008824 DNA helicase, Holliday junction RuvB type, N-terminal CLI_RS15295 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15295 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15300 IPR000085 Bacterial DNA recombination protein RuvA CLI_RS15300 IPR010994 RuvA domain 2-like CLI_RS15300 IPR011114 DNA helicase, Holliday junction RuvA type, domain III, C-terminal CLI_RS15300 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15300 IPR013849 DNA helicase, Holliday junction RuvA type, domain I, bacterial CLI_RS15310 IPR002876 Transcriptional regulator TACO1-like CLI_RS15310 IPR017856 Integrase, N-terminal zinc-binding domain-like CLI_RS15310 IPR026563 Transcriptional regulator TACO1-like, domain 2 CLI_RS15310 IPR026564 Transcriptional regulator TACO1-like, domain 3 CLI_RS15310 IPR029072 YebC-like CLI_RS15315 IPR000640 Translation elongation factor EFG, V domain CLI_RS15315 IPR001498 Impact, N-terminal CLI_RS15315 IPR009022 Elongation factor G, III-V domain CLI_RS15315 IPR015269 Uncharacterised domain UPF0029, Impact, C-terminal CLI_RS15315 IPR015796 Impact family, bacterial/archaeal CLI_RS15315 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS15315 IPR020569 Uncharacterised protein family UPF0029, Impact, conserved site CLI_RS15315 IPR023582 Impact family CLI_RS15320 IPR004155 PBS lyase HEAT-like repeat CLI_RS15320 IPR011989 Armadillo-like helical CLI_RS15320 IPR016024 Armadillo-type fold CLI_RS15320 IPR029491 Helicase Helix-turn-helix domain CLI_RS15325 IPR000524 Transcription regulator HTH, GntR CLI_RS15325 IPR004839 Aminotransferase, class I/classII CLI_RS15325 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15325 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS15325 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS15330 IPR002934 Nucleotidyl transferase domain CLI_RS15340 IPR004039 Rubredoxin-type fold CLI_RS15340 IPR018527 Rubredoxin, iron-binding site CLI_RS15340 IPR024922 Rubredoxin CLI_RS15340 IPR024935 Rubredoxin domain CLI_RS15345 IPR005225 Small GTP-binding protein domain CLI_RS15345 IPR006073 GTP binding domain CLI_RS15345 IPR016496 GTPase HflX CLI_RS15345 IPR025121 GTPase HflX N-terminal domain CLI_RS15345 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15345 IPR032305 CLI_RS15345 CLI_RS15350 IPR000836 Phosphoribosyltransferase domain CLI_RS15350 IPR005904 Hypoxanthine phosphoribosyl transferase CLI_RS15350 IPR029057 Phosphoribosyltransferase-like CLI_RS15355 IPR014197 Sporulation protein YunB CLI_RS15360 IPR001264 Glycosyl transferase, family 51 CLI_RS15360 IPR001460 Penicillin-binding protein, transpeptidase CLI_RS15360 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS15360 IPR023346 Lysozyme-like domain CLI_RS15365 IPR005562 SpoVA CLI_RS15365 IPR014204 Sporulation stage V, protein AE CLI_RS15370 IPR010894 Stage V sporulation AD CLI_RS15370 IPR016039 Thiolase-like CLI_RS15375 IPR005562 SpoVA CLI_RS15375 IPR014203 Sporulation stage V, protein AC CLI_RS15380 IPR000943 RNA polymerase sigma-70 CLI_RS15380 IPR007624 RNA polymerase sigma-70 region 3 CLI_RS15380 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS15380 IPR007630 RNA polymerase sigma-70 region 4 CLI_RS15380 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15380 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS15380 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS15380 IPR014236 RNA polymerase sigma-F type CLI_RS15380 IPR014284 RNA polymerase sigma-70 like domain CLI_RS15380 IPR014322 RNA polymerase sigma-B/F/G type CLI_RS15380 IPR016263 RNA polymerase sporulation-specific sigma factor, SigK/SigE CLI_RS15385 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS15385 IPR010194 Anti-sigma F factor CLI_RS15390 IPR002645 STAS domain CLI_RS15390 IPR003658 Anti-sigma factor antagonist CLI_RS15390 IPR014237 Anti-sigma F factor antagonist CLI_RS15395 IPR011639 Restriction modification methylase Eco57I CLI_RS15395 IPR025931 TaqI-like C-terminal specificity domain CLI_RS15395 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS15400 IPR002509 Polysaccharide deacetylase CLI_RS15400 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS15400 IPR014235 Delta-lactam-biosynthetic de-N-acetylase CLI_RS15405 IPR004629 Glycosyl transferase WecB/TagA/CpsF CLI_RS15410 IPR003362 Bacterial sugar transferase CLI_RS15410 IPR017475 Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase CLI_RS15415 IPR002797 Polysaccharide biosynthesis protein CLI_RS15415 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS15420 IPR004268 Flagellin assembly, membrane protein MviN CLI_RS15425 IPR001296 Glycosyl transferase, family 1 CLI_RS15425 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS15430 IPR001296 Glycosyl transferase, family 1 CLI_RS15430 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS15435 IPR007016 O-antigen ligase-related CLI_RS15440 IPR001296 Glycosyl transferase, family 1 CLI_RS15440 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS15445 IPR003331 UDP-N-acetylglucosamine 2-epimerase CLI_RS15445 IPR029767 UDP-N-acetylglucosamine 2-epimerase, WecB-type CLI_RS15450 IPR001296 Glycosyl transferase, family 1 CLI_RS15450 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS15465 IPR001611 Leucine-rich repeat CLI_RS15465 IPR032675 CLI_RS15465 CLI_RS15470 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS15475 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS15475 IPR011004 Trimeric LpxA-like CLI_RS15480 IPR000683 Oxidoreductase, N-terminal CLI_RS15480 IPR004104 Oxidoreductase, C-terminal CLI_RS15480 IPR008354 Glucose-fructose oxidoreductase, bacterial CLI_RS15480 IPR016040 NAD(P)-binding domain CLI_RS15485 IPR001732 UDP-glucose/GDP-mannose dehydrogenase, N-terminal CLI_RS15485 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLI_RS15485 IPR014026 UDP-glucose/GDP-mannose dehydrogenase, dimerisation CLI_RS15485 IPR014027 UDP-glucose/GDP-mannose dehydrogenase, C-terminal CLI_RS15485 IPR016040 NAD(P)-binding domain CLI_RS15485 IPR017476 UDP-glucose/GDP-mannose dehydrogenase CLI_RS15485 IPR028359 UDP-N-acetyl-D-mannosamine/glucosamine dehydrogenase CLI_RS15490 IPR003869 Polysaccharide biosynthesis protein, CapD-like domain CLI_RS15490 IPR016040 NAD(P)-binding domain CLI_RS15490 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS15495 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS15495 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLI_RS15495 IPR011123 Two component regulator three Y CLI_RS15500 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS15510 IPR002901 Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase-like domain CLI_RS15515 IPR005771 UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal-type CLI_RS15515 IPR005835 Nucleotidyl transferase CLI_RS15515 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS15520 IPR001440 Tetratricopeptide TPR1 CLI_RS15520 IPR011990 Tetratricopeptide-like helical domain CLI_RS15520 IPR019734 Tetratricopeptide repeat CLI_RS15525 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLI_RS15525 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLI_RS15525 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLI_RS15525 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLI_RS15525 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLI_RS15530 IPR001021 Ribosomal protein L25, long-form CLI_RS15530 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CLI_RS15530 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CLI_RS15530 IPR020057 Ribosomal protein L25, beta domain CLI_RS15530 IPR029751 Ribosomal protein L25 CLI_RS15535 IPR000310 Orn/Lys/Arg decarboxylase, major domain CLI_RS15535 IPR008286 Orn/Lys/Arg decarboxylase, C-terminal CLI_RS15535 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS15535 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS15535 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS15545 IPR002505 Phosphate acetyl/butaryl transferase CLI_RS15545 IPR012147 Phosphate acetyl/butyryltransferase CLI_RS15550 IPR000262 FMN-dependent dehydrogenase CLI_RS15550 IPR013785 Aldolase-type TIM barrel CLI_RS15555 IPR007553 Domain of unknown function DUF523 CLI_RS15560 IPR000432 DNA mismatch repair protein MutS, C-terminal CLI_RS15560 IPR002625 Smr protein/MutS2 C-terminal CLI_RS15560 IPR005747 Endonuclease MutS2 CLI_RS15560 IPR007696 DNA mismatch repair protein MutS, core CLI_RS15560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15565 IPR001539 Peptidase U32 CLI_RS15565 IPR020988 Peptidase U32, collagenase CLI_RS15590 IPR001173 Glycosyltransferase 2-like CLI_RS15590 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS15595 IPR007838 Cell division protein ZapA-like CLI_RS15600 IPR002547 tRNA-binding domain CLI_RS15600 IPR004532 Phenylalanine-tRNA ligase, class IIc, beta subunit CLI_RS15600 IPR005121 Phenylalanine-tRNA ligase, beta subunit, ferrodoxin-fold anticodon-binding CLI_RS15600 IPR005146 B3/B4 tRNA-binding domain CLI_RS15600 IPR005147 tRNA synthetase, B5-domain CLI_RS15600 IPR009061 DNA binding domain, putative CLI_RS15600 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15600 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS15605 IPR002319 Phenylalanyl-tRNA synthetase CLI_RS15605 IPR004188 Phenylalanine-tRNA ligase, class II, N-terminal CLI_RS15605 IPR004529 Phenylalanyl-tRNA synthetase, class IIc, alpha subunit CLI_RS15605 IPR010978 tRNA-binding arm CLI_RS15605 IPR022911 Phenylalanine-tRNA ligase alpha chain 1, bacterial CLI_RS15610 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLI_RS15610 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLI_RS15610 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS15610 IPR029028 Alpha/beta knot methyltransferases CLI_RS15610 IPR029064 50S ribosomal protein L30e-like CLI_RS15615 IPR003148 Regulator of K+ conductance, N-terminal CLI_RS15615 IPR006037 Regulator of K+ conductance, C-terminal CLI_RS15615 IPR016040 NAD(P)-binding domain CLI_RS15620 IPR003445 Cation transporter CLI_RS15620 IPR004772 Potassium uptake protein TrkH family CLI_RS15625 IPR005813 Ribosomal protein L20 CLI_RS15630 IPR001706 Ribosomal protein L35, non-mitochondrial CLI_RS15630 IPR018265 Ribosomal protein L35, conserved site CLI_RS15630 IPR021137 Ribosomal protein L35 CLI_RS15635 IPR001288 Translation initiation factor 3 CLI_RS15635 IPR019814 Translation initiation factor 3, N-terminal CLI_RS15635 IPR019815 Translation initiation factor 3, C-terminal CLI_RS15640 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLI_RS15640 IPR002320 Threonine-tRNA ligase, class IIa CLI_RS15640 IPR004095 TGS CLI_RS15640 IPR004154 Anticodon-binding CLI_RS15640 IPR012675 Beta-grasp domain CLI_RS15640 IPR012676 TGS-like CLI_RS15640 IPR012947 Threonyl/alanyl tRNA synthetase, SAD CLI_RS15640 IPR018163 Threonyl/alanyl tRNA synthetase, class II-like, putative editing domain CLI_RS15645 IPR014199 Sporulation protein YtxC CLI_RS15655 IPR031584 CLI_RS15655 CLI_RS15660 IPR003439 ABC transporter-like CLI_RS15660 IPR003593 AAA+ ATPase domain CLI_RS15660 IPR017871 ABC transporter, conserved site CLI_RS15660 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15690 IPR000397 Heat shock protein Hsp33 CLI_RS15690 IPR016153 Heat shock protein Hsp33, N-terminal CLI_RS15690 IPR016154 Heat shock protein Hsp33, C-terminal CLI_RS15695 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS15700 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS15705 IPR003439 ABC transporter-like CLI_RS15705 IPR003593 AAA+ ATPase domain CLI_RS15705 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLI_RS15705 IPR017871 ABC transporter, conserved site CLI_RS15705 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15710 IPR003439 ABC transporter-like CLI_RS15710 IPR003593 AAA+ ATPase domain CLI_RS15710 IPR013563 Oligopeptide/dipeptide ABC transporter, C-terminal CLI_RS15710 IPR017871 ABC transporter, conserved site CLI_RS15710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15715 IPR000515 MetI-like domain CLI_RS15715 IPR025966 Oligopeptide transport permease C-like, N-terminal domain CLI_RS15720 IPR000515 MetI-like domain CLI_RS15725 IPR000914 Bacterial extracellular solute-binding protein, family 5 CLI_RS15725 IPR030678 CLI_RS15725 CLI_RS15730 IPR000534 Semialdehyde dehydrogenase, NAD-binding CLI_RS15730 IPR005986 Aspartate-semialdehyde dehydrogenase, beta-type CLI_RS15730 IPR012080 Aspartate-semialdehyde dehydrogenase CLI_RS15730 IPR012280 Semialdehyde dehydrogenase, dimerisation domain CLI_RS15730 IPR016040 NAD(P)-binding domain CLI_RS15735 IPR002220 DapA-like CLI_RS15735 IPR005263 4-hydroxy-tetrahydrodipicolinate synthase, DapA CLI_RS15735 IPR013785 Aldolase-type TIM barrel CLI_RS15735 IPR020624 Dihydrodipicolinate synthetase, conserved site CLI_RS15735 IPR020625 Dihydrodipicolinate synthetase, active site CLI_RS15740 IPR000846 Dihydrodipicolinate reductase, N-terminal CLI_RS15740 IPR016040 NAD(P)-binding domain CLI_RS15740 IPR022663 Dihydrodipicolinate reductase, C-terminal CLI_RS15740 IPR022664 Dihydrodipicolinate reductase, conserved site CLI_RS15740 IPR023940 Dihydrodipicolinate reductase, bacterial CLI_RS15745 IPR004838 Aminotransferases, class-I, pyridoxal-phosphate-binding site CLI_RS15745 IPR004839 Aminotransferase, class I/classII CLI_RS15745 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS15745 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS15745 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS15750 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS15750 IPR011004 Trimeric LpxA-like CLI_RS15750 IPR013710 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, N-terminal CLI_RS15750 IPR018357 Hexapeptide transferase, conserved site CLI_RS15750 IPR019873 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase, DapH CLI_RS15755 IPR000424 Primosome PriB/single-strand DNA-binding CLI_RS15755 IPR012340 Nucleic acid-binding, OB-fold CLI_RS15765 IPR002509 Polysaccharide deacetylase CLI_RS15765 IPR011330 Glycoside hydrolase/deacetylase, beta/alpha-barrel CLI_RS15765 IPR014132 Sporulation polysaccharide deacetylase, PdaB CLI_RS15770 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS15770 IPR025374 Protein of unknown function DUF4364 CLI_RS15775 IPR011044 Quinoprotein amine dehydrogenase, beta chain-like CLI_RS15775 IPR015943 WD40/YVTN repeat-like-containing domain CLI_RS15780 IPR023806 Conserved hypothetical protein CHP03905 CLI_RS15780 IPR024434 TSCPD domain CLI_RS15785 IPR001645 Folylpolyglutamate synthetase CLI_RS15785 IPR004101 Mur ligase, C-terminal CLI_RS15785 IPR013221 Mur ligase, central CLI_RS15785 IPR018109 Folylpolyglutamate synthetase, conserved site CLI_RS15790 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS15790 IPR002300 Aminoacyl-tRNA synthetase, class Ia CLI_RS15790 IPR002303 Valine-tRNA ligase CLI_RS15790 IPR009008 Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain CLI_RS15790 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLI_RS15790 IPR010978 tRNA-binding arm CLI_RS15790 IPR013155 Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding CLI_RS15790 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS15790 IPR019499 Valyl-tRNA synthetase, tRNA-binding arm CLI_RS15795 IPR000182 GNAT domain CLI_RS15795 IPR016181 Acyl-CoA N-acyltransferase CLI_RS15800 IPR000209 Peptidase S8/S53 domain CLI_RS15805 IPR009081 Acyl carrier protein-like CLI_RS15805 IPR023972 Conserved hypothetical protein CHP04069, acyl carrier-related CLI_RS15810 IPR023823 Conserved hypothetical protein CHP04066, peptide maturation system CLI_RS15815 IPR000385 MoaA/nifB/pqqE, iron-sulphur binding, conserved site CLI_RS15815 IPR007197 Radical SAM CLI_RS15815 IPR013785 Aldolase-type TIM barrel CLI_RS15815 IPR024001 Cysteine-rich peptide, radical SAM maturase, CcpM CLI_RS15820 IPR023968 Bacteriocin precursor, CLI3235 family, putative CLI_RS15825 IPR003439 ABC transporter-like CLI_RS15825 IPR003593 AAA+ ATPase domain CLI_RS15825 IPR011527 ABC transporter type 1, transmembrane domain CLI_RS15825 IPR017871 ABC transporter, conserved site CLI_RS15825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15830 IPR003439 ABC transporter-like CLI_RS15830 IPR003593 AAA+ ATPase domain CLI_RS15830 IPR017871 ABC transporter, conserved site CLI_RS15830 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15835 IPR003838 Permease FtsX-like CLI_RS15835 IPR025857 MacB-like periplasmic core domain CLI_RS15845 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS15845 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS15850 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS15850 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS15865 IPR001668 Plasmid recombination enzyme CLI_RS15870 IPR003688 Ti-type conjugative transfer system, TraG-like CLI_RS15870 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS15875 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS15875 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS15880 IPR006119 Resolvase, N-terminal CLI_RS15900 IPR002502 N-acetylmuramoyl-L-alanine amidase domain CLI_RS15900 IPR003646 SH3-like domain, bacterial-type CLI_RS15900 IPR006619 Peptidoglycan recognition protein family domain, metazoa/bacteria CLI_RS15900 IPR015510 Peptidoglycan recognition protein CLI_RS15905 IPR006480 Bacteriophage phi-29, Gp14, holin CLI_RS15920 IPR029432 Siphovirus Gp37-like protein CLI_RS15925 IPR008841 Siphovirus-type tail component CLI_RS15930 IPR010090 Phage tail tape measure protein CLI_RS15940 IPR006490 Phage major tail protein CLI_RS15950 IPR010064 Bacteriophage HK97-gp10, putative tail-component CLI_RS15955 IPR008767 Bacteriophage SPP1, head-tail adaptor CLI_RS15960 IPR006450 Phage protein of unkonwn function CLI_RS15960 IPR021146 Phage gp6-like head-tail connector protein CLI_RS15965 IPR011112 Rho termination factor, N-terminal CLI_RS15970 IPR006444 Phage major capsid protein, HK97 CLI_RS15970 IPR024455 Phage capsid CLI_RS15975 IPR001907 ATP-dependent Clp protease proteolytic subunit CLI_RS15975 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS15975 IPR029045 ClpP/crotonase-like domain CLI_RS15980 IPR006427 Phage portal protein, HK97 CLI_RS15980 IPR006944 Bacteriophage/Gene transfer agent portal protein CLI_RS15985 IPR005021 Phage terminase CLI_RS15990 IPR006448 Putative phage terminase, small subunit, P27 family CLI_RS16015 IPR002104 Integrase, catalytic CLI_RS16015 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLI_RS16015 IPR013762 Integrase-like, catalytic core CLI_RS16030 IPR007358 Nucleoid-associated protein NdpA CLI_RS16055 IPR001525 C-5 cytosine methyltransferase CLI_RS16055 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS16060 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS16070 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS16080 IPR024424 Replicative helicase inhibitor G39P CLI_RS16085 IPR010056 Phage replisome organiser, N-terminal domain CLI_RS16100 IPR025309 KTSC domain CLI_RS16110 IPR018873 KilA-N, DNA-binding domain CLI_RS16110 IPR018878 ORF6C domain CLI_RS16115 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS16115 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS16120 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS16120 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS16125 IPR006119 Resolvase, N-terminal CLI_RS16125 IPR011109 Recombinase CLI_RS16125 IPR025827 Recombinase zinc beta ribbon domain CLI_RS16135 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16135 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS16135 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLI_RS16140 IPR003439 ABC transporter-like CLI_RS16140 IPR003593 AAA+ ATPase domain CLI_RS16140 IPR017871 ABC transporter, conserved site CLI_RS16140 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16145 IPR000515 MetI-like domain CLI_RS16150 IPR011990 Tetratricopeptide-like helical domain CLI_RS16150 IPR019734 Tetratricopeptide repeat CLI_RS16155 IPR002931 Transglutaminase-like CLI_RS16160 IPR003783 Regulatory protein RecX CLI_RS16165 IPR001431 Peptidase M16, zinc-binding site CLI_RS16165 IPR007863 Peptidase M16, C-terminal domain CLI_RS16165 IPR011237 Peptidase M16 domain CLI_RS16165 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLI_RS16165 IPR011765 Peptidase M16, N-terminal CLI_RS16170 IPR010387 Queuosine precursor transporter QueT CLI_RS16175 IPR002563 Flavin reductase-like, FMN-binding CLI_RS16175 IPR012349 FMN-binding split barrel CLI_RS16180 IPR002477 Peptidoglycan binding-like CLI_RS16180 IPR005490 L,D-transpeptidase catalytic domain CLI_RS16185 IPR002781 Transmembrane protein TauE like CLI_RS16190 IPR009664 Protein of unknown function DUF1255 CLI_RS16190 IPR011051 RmlC-like cupin domain CLI_RS16190 IPR014710 RmlC-like jelly roll fold CLI_RS16195 IPR000304 Pyrroline-5-carboxylate reductase CLI_RS16195 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLI_RS16195 IPR016040 NAD(P)-binding domain CLI_RS16195 IPR028939 Pyrroline-5-carboxylate reductase, catalytic, N-terminal CLI_RS16195 IPR029036 Pyrroline-5-carboxylate reductase, dimerisation domain CLI_RS16200 IPR001150 Glycine radical domain CLI_RS16200 IPR004184 Pyruvate formate lyase domain CLI_RS16200 IPR010098 Glycyl radical enzyme, PFL2/glycerol dehydratase family CLI_RS16205 IPR001989 Radical-activating enzyme, conserved site CLI_RS16205 IPR007197 Radical SAM CLI_RS16205 IPR012839 Glycyl radical enzyme activase CLI_RS16205 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS16205 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16210 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS16210 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS16210 IPR011051 RmlC-like cupin domain CLI_RS16210 IPR013096 Cupin 2, conserved barrel CLI_RS16210 IPR014710 RmlC-like jelly roll fold CLI_RS16215 IPR001357 BRCT domain CLI_RS16215 IPR010994 RuvA domain 2-like CLI_RS16225 IPR002035 von Willebrand factor, type A CLI_RS16230 IPR003593 AAA+ ATPase domain CLI_RS16230 IPR011704 ATPase, dynein-related, AAA domain CLI_RS16230 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16245 IPR001080 3Fe-4S ferredoxin CLI_RS16250 IPR018709 CoA enzyme activase, domain of unknown function DUF2229 CLI_RS16260 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16260 IPR008275 CoA enzyme activase CLI_RS16265 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS16265 IPR002197 DNA binding HTH domain, Fis-type CLI_RS16265 IPR003593 AAA+ ATPase domain CLI_RS16265 IPR009057 Homeodomain-like CLI_RS16265 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS16265 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS16265 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS16265 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16270 IPR001308 Electron transfer flavoprotein, alpha subunit CLI_RS16270 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16270 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS16270 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS16270 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site CLI_RS16270 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS16275 IPR000049 Electron transfer flavoprotein, beta-subunit, conserved site CLI_RS16275 IPR012255 Electron transfer flavoprotein, beta subunit CLI_RS16275 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16275 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS16280 IPR006089 Acyl-CoA dehydrogenase, conserved site CLI_RS16280 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLI_RS16280 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLI_RS16280 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLI_RS16280 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLI_RS16285 IPR002155 Thiolase CLI_RS16285 IPR016039 Thiolase-like CLI_RS16285 IPR020610 Thiolase, active site CLI_RS16285 IPR020613 Thiolase, conserved site CLI_RS16285 IPR020615 Thiolase, acyl-enzyme intermediate active site CLI_RS16285 IPR020616 Thiolase, N-terminal CLI_RS16285 IPR020617 Thiolase, C-terminal CLI_RS16290 IPR006108 3-hydroxyacyl-CoA dehydrogenase, C-terminal CLI_RS16290 IPR006176 3-hydroxyacyl-CoA dehydrogenase, NAD binding CLI_RS16290 IPR006180 3-hydroxyacyl-CoA dehydrogenase, conserved site CLI_RS16290 IPR008927 6-phosphogluconate dehydrogenase, C-terminal-like CLI_RS16290 IPR013328 Dehydrogenase, multihelical CLI_RS16290 IPR016040 NAD(P)-binding domain CLI_RS16290 IPR022694 3-hydroxyacyl-CoA dehydrogenase CLI_RS16295 IPR001753 Crotonase superfamily CLI_RS16295 IPR014748 Crontonase, C-terminal CLI_RS16295 IPR018376 Enoyl-CoA hydratase/isomerase, conserved site CLI_RS16295 IPR029045 ClpP/crotonase-like domain CLI_RS16305 IPR000305 GIY-YIG nuclease superfamily CLI_RS16305 IPR001943 UVR domain CLI_RS16305 IPR027299 GIY-YIG domain CLI_RS16310 IPR006043 Xanthine/uracil/vitamin C permease CLI_RS16310 IPR026033 Purine permease PbuG-like CLI_RS16310 IPR029940 CLI_RS16310 CLI_RS16315 IPR003607 HD/PDEase domain CLI_RS16315 IPR006674 HD domain CLI_RS16315 IPR006675 Uncharacterised domain HDIG CLI_RS16320 IPR001448 Small acid-soluble spore protein, alpha/beta-type CLI_RS16330 IPR001640 Prolipoprotein diacylglyceryl transferase CLI_RS16335 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS16335 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLI_RS16335 IPR029052 Metallo-dependent phosphatase-like CLI_RS16345 IPR004129 Glycerophosphoryl diester phosphodiesterase CLI_RS16345 IPR017946 PLC-like phosphodiesterase, TIM beta/alpha-barrel domain CLI_RS16345 IPR030395 CLI_RS16345 CLI_RS16350 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS16350 IPR029151 Periplasmic sensor domain-like CLI_RS16350 IPR033479 CLI_RS16350 CLI_RS16355 IPR003251 Rubrerythrin CLI_RS16355 IPR004039 Rubredoxin-type fold CLI_RS16355 IPR009078 Ferritin-like superfamily CLI_RS16355 IPR012347 Ferritin-related CLI_RS16360 IPR001989 Radical-activating enzyme, conserved site CLI_RS16360 IPR007197 Radical SAM CLI_RS16360 IPR012838 Pyruvate formate-lyase activating enzyme CLI_RS16365 IPR001150 Glycine radical domain CLI_RS16365 IPR004184 Pyruvate formate lyase domain CLI_RS16365 IPR005949 Formate acetyltransferase CLI_RS16365 IPR019777 Formate C-acetyltransferase glycine radical, conserved site CLI_RS16375 IPR001021 Ribosomal protein L25, long-form CLI_RS16375 IPR011035 Ribosomal protein L25/Gln-tRNA synthetase, anti-codon-binding domain CLI_RS16375 IPR020056 Ribosomal protein L25/Gln-tRNA synthetase, beta-barrel domain CLI_RS16375 IPR020057 Ribosomal protein L25, beta domain CLI_RS16375 IPR029751 Ribosomal protein L25 CLI_RS16385 IPR002481 Ferric-uptake regulator CLI_RS16385 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16390 IPR006059 Bacterial extracellular solute-binding, family 1 CLI_RS16400 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16400 IPR013196 Helix-turn-helix, type 11 CLI_RS16400 IPR026881 WYL domain CLI_RS16420 IPR003675 CAAX amino terminal protease CLI_RS16425 IPR006073 GTP binding domain CLI_RS16425 IPR019987 GTP-binding protein, ribosome biogenesis, YsxC CLI_RS16425 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16430 IPR003111 Peptidase S16, lon N-terminal CLI_RS16430 IPR003593 AAA+ ATPase domain CLI_RS16430 IPR003959 ATPase, AAA-type, core CLI_RS16430 IPR004815 Lon protease, bacterial/eukaryotic-type CLI_RS16430 IPR008268 Peptidase S16, active site CLI_RS16430 IPR008269 Peptidase S16, Lon C-terminal CLI_RS16430 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS16430 IPR015947 PUA-like domain CLI_RS16430 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS16430 IPR027065 Lon protease CLI_RS16430 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16430 IPR027543 Lon protease, bacterial CLI_RS16435 IPR003593 AAA+ ATPase domain CLI_RS16435 IPR003959 ATPase, AAA-type, core CLI_RS16435 IPR008269 Peptidase S16, Lon C-terminal CLI_RS16435 IPR014251 Sporulation protease LonB CLI_RS16435 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS16435 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS16435 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS16435 IPR027065 Lon protease CLI_RS16435 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16435 IPR033141 CLI_RS16435 CLI_RS16440 IPR003593 AAA+ ATPase domain CLI_RS16440 IPR003959 ATPase, AAA-type, core CLI_RS16440 IPR004487 Clp protease, ATP-binding subunit ClpX CLI_RS16440 IPR010603 Zinc finger, ClpX C4-type CLI_RS16440 IPR019489 Clp ATPase, C-terminal CLI_RS16440 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16445 IPR001907 ATP-dependent Clp protease proteolytic subunit CLI_RS16445 IPR018215 ClpP, active site CLI_RS16445 IPR023562 Clp protease proteolytic subunit /Translocation-enhancing protein TepA CLI_RS16445 IPR029045 ClpP/crotonase-like domain CLI_RS16445 IPR033135 CLI_RS16445 CLI_RS16450 IPR001179 Peptidyl-prolyl cis-trans isomerase, FKBP-type, domain CLI_RS16450 IPR005215 Trigger factor CLI_RS16450 IPR008880 Trigger factor, C-terminal domain CLI_RS16450 IPR008881 Trigger factor, ribosome-binding, bacterial CLI_RS16450 IPR027304 Trigger factor/SurA domain CLI_RS16455 IPR013022 Xylose isomerase-like, TIM barrel domain CLI_RS16465 IPR000836 Phosphoribosyltransferase domain CLI_RS16465 IPR006273 Orotate phosphoribosyltransferase, bacterial CLI_RS16465 IPR023031 Orotate phosphoribosyltransferase CLI_RS16465 IPR029057 Phosphoribosyltransferase-like CLI_RS16470 IPR001295 Dihydroorotate dehydrogenase, conserved site CLI_RS16470 IPR005720 Dihydroorotate dehydrogenase domain CLI_RS16470 IPR012135 Dihydroorotate dehydrogenase, class 1/ 2 CLI_RS16470 IPR013785 Aldolase-type TIM barrel CLI_RS16470 IPR024920 Dihydroorotate dehydrogenase, class 1 CLI_RS16475 IPR008333 Oxidoreductase, FAD-binding domain CLI_RS16475 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit CLI_RS16475 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS16475 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLI_RS16475 IPR023455 Dihydroorotate dehydrogenase electron transfer subunit CLI_RS16480 IPR001754 Orotidine 5'-phosphate decarboxylase domain CLI_RS16480 IPR011060 Ribulose-phosphate binding barrel CLI_RS16480 IPR011995 Orotidine 5'-phosphate decarboxylase, type 2 CLI_RS16480 IPR013785 Aldolase-type TIM barrel CLI_RS16485 IPR002195 Dihydroorotase, conserved site CLI_RS16485 IPR004722 Dihydroorotase CLI_RS16485 IPR006680 Amidohydrolase 1 CLI_RS16485 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS16485 IPR032466 CLI_RS16485 CLI_RS16490 IPR002801 Aspartate transcarbamylase regulatory subunit CLI_RS16490 IPR020542 Aspartate carbamoyltransferase regulatory subunit, C-terminal CLI_RS16490 IPR020545 Aspartate carbamoyltransferase regulatory subunit, N-terminal CLI_RS16495 IPR002082 Aspartate carbamoyltransferase CLI_RS16495 IPR006130 Aspartate/ornithine carbamoyltransferase CLI_RS16495 IPR006131 Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain CLI_RS16495 IPR006132 Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding CLI_RS16500 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16500 IPR008275 CoA enzyme activase CLI_RS16505 IPR021778 Protein of unknown function DUF3343 CLI_RS16510 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS16515 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS16520 IPR003787 Sulphur relay, DsrE/F-like protein CLI_RS16520 IPR027396 DsrEFH-like CLI_RS16525 IPR003439 ABC transporter-like CLI_RS16525 IPR003593 AAA+ ATPase domain CLI_RS16525 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16535 IPR000515 MetI-like domain CLI_RS16550 IPR004927 Alkylmercury lyase CLI_RS16555 IPR004927 Alkylmercury lyase CLI_RS16570 IPR005524 Protein of unknown function DUF318, transmembrane CLI_RS16575 IPR012336 Thioredoxin-like fold CLI_RS16690 IPR000979 Phosphodiesterase MJ0936/Vps29 CLI_RS16690 IPR024654 Calcineurin-like phosphoesterase domain, lpxH type CLI_RS16690 IPR029052 Metallo-dependent phosphatase-like CLI_RS16695 IPR002637 Ham1-like protein CLI_RS16695 IPR020922 Non-canonical purine NTP pyrophosphatase CLI_RS16695 IPR029001 Inosine triphosphate pyrophosphatase-like CLI_RS16710 IPR000914 Bacterial extracellular solute-binding protein, family 5 CLI_RS16710 IPR030678 CLI_RS16710 CLI_RS16715 IPR003789 Aspartyl/glutamyl-tRNA amidotransferase subunit B-related CLI_RS16715 IPR004413 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit CLI_RS16715 IPR006075 Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic CLI_RS16715 IPR017958 Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site CLI_RS16715 IPR017959 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E CLI_RS16715 IPR018027 Asn/Gln amidotransferase CLI_RS16715 IPR023168 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal CLI_RS16720 IPR000120 Amidase CLI_RS16720 IPR004412 Glutamyl-tRNA(Gln) amidotransferase A subunit CLI_RS16720 IPR020556 Amidase, conserved site CLI_RS16720 IPR023631 Amidase signature domain CLI_RS16725 IPR003837 Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit CLI_RS16730 IPR001991 Sodium:dicarboxylate symporter CLI_RS16740 IPR001357 BRCT domain CLI_RS16740 IPR001679 NAD-dependent DNA ligase CLI_RS16740 IPR003583 Helix-hairpin-helix DNA-binding motif, class 1 CLI_RS16740 IPR004150 NAD-dependent DNA ligase, OB-fold CLI_RS16740 IPR010994 RuvA domain 2-like CLI_RS16740 IPR012340 Nucleic acid-binding, OB-fold CLI_RS16740 IPR013839 NAD-dependent DNA ligase, adenylation CLI_RS16740 IPR013840 NAD-dependent DNA ligase, N-terminal CLI_RS16740 IPR033136 CLI_RS16740 CLI_RS16745 IPR000212 DNA helicase, UvrD/REP type CLI_RS16745 IPR005751 ATP-dependent DNA helicase PcrA CLI_RS16745 IPR013986 DExx box DNA helicase domain CLI_RS16745 IPR014016 UvrD-like Helicase, ATP-binding domain CLI_RS16745 IPR014017 DNA helicase, UvrD-like, C-terminal CLI_RS16745 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16750 IPR000831 Trp repressor CLI_RS16750 IPR010921 Trp repressor/replication initiator CLI_RS16750 IPR013368 TrpR homologue YerC/YecD CLI_RS16755 IPR000748 Pseudouridine synthase, RsuA/RluB/E/F CLI_RS16755 IPR002942 RNA-binding S4 domain CLI_RS16755 IPR006145 Pseudouridine synthase, RsuA/RluB/C/D/E/F CLI_RS16755 IPR018496 Pseudouridine synthase, RsuA/RluB/E/F, conserved site CLI_RS16755 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS16760 IPR000189 Prokaryotic transglycosylase, active site CLI_RS16760 IPR008258 Lytic transglycosylase-like SLT domain CLI_RS16760 IPR023346 Lysozyme-like domain CLI_RS16765 IPR011123 Two component regulator three Y CLI_RS16775 IPR003791 Protein of unknown function UPF0178 CLI_RS16780 IPR001672 Phosphoglucose isomerase (PGI) CLI_RS16780 IPR018189 Phosphoglucose isomerase, conserved site CLI_RS16785 IPR025306 Probable zinc-binding domain CLI_RS16790 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS16790 IPR009057 Homeodomain-like CLI_RS16790 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS16790 IPR023772 DNA-binding HTH domain, TetR-type, conserved site CLI_RS16795 IPR000182 GNAT domain CLI_RS16795 IPR016181 Acyl-CoA N-acyltransferase CLI_RS16800 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLI_RS16800 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLI_RS16800 IPR016040 NAD(P)-binding domain CLI_RS16800 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLI_RS16800 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS16805 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLI_RS16805 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLI_RS16805 IPR016040 NAD(P)-binding domain CLI_RS16805 IPR029752 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site 1 CLI_RS16805 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS16815 IPR001308 Electron transfer flavoprotein, alpha subunit CLI_RS16815 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16815 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS16815 IPR014731 Electron transfer flavoprotein, alpha subunit, C-terminal CLI_RS16815 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS16815 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16815 IPR018206 Electron transfer flavoprotein, alpha subunit, C-terminal, conserved site CLI_RS16815 IPR029035 DHS-like NAD/FAD-binding domain CLI_RS16820 IPR012255 Electron transfer flavoprotein, beta subunit CLI_RS16820 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16820 IPR014730 Electron transfer flavoprotein, alpha/beta-subunit, N-terminal CLI_RS16825 IPR006089 Acyl-CoA dehydrogenase, conserved site CLI_RS16825 IPR006091 Acyl-CoA oxidase/dehydrogenase, central domain CLI_RS16825 IPR009075 Acyl-CoA dehydrogenase/oxidase C-terminal CLI_RS16825 IPR009100 Acyl-CoA dehydrogenase/oxidase, N-terminal and middle domain CLI_RS16825 IPR013786 Acyl-CoA dehydrogenase/oxidase, N-terminal CLI_RS16830 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS16835 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS16840 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS16840 IPR008275 CoA enzyme activase CLI_RS16845 IPR003673 CoA-transferase family III CLI_RS16845 IPR023606 CoA-transferase family III domain CLI_RS16850 IPR000873 AMP-dependent synthetase/ligase CLI_RS16850 IPR020845 AMP-binding, conserved site CLI_RS16850 IPR025110 AMP-binding enzyme C-terminal domain CLI_RS16855 IPR004685 Branched-chain amino acid transport system II carrier protein CLI_RS16860 IPR001674 GMP synthase, C-terminal CLI_RS16860 IPR004739 GMP synthase, N-terminal CLI_RS16860 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16860 IPR017926 Glutamine amidotransferase CLI_RS16860 IPR022310 NAD/GMP synthase CLI_RS16860 IPR022955 GMP synthase CLI_RS16860 IPR029062 Class I glutamine amidotransferase-like CLI_RS16865 IPR000644 CBS domain CLI_RS16865 IPR001093 IMP dehydrogenase/GMP reductase CLI_RS16865 IPR005990 Inosine-5'-monophosphate dehydrogenase CLI_RS16865 IPR013785 Aldolase-type TIM barrel CLI_RS16865 IPR015875 IMP dehydrogenase / GMP reductase, conserved site CLI_RS16870 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CLI_RS16870 IPR012089 2-thiocytidine tRNA biosynthesis protein, TtcA CLI_RS16870 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS16875 IPR001844 Chaperonin Cpn60 CLI_RS16875 IPR002423 Chaperonin Cpn60/TCP-1 CLI_RS16875 IPR018370 Chaperonin Cpn60, conserved site CLI_RS16875 IPR027409 GroEL-like apical domain CLI_RS16875 IPR027413 GroEL-like equatorial domain CLI_RS16880 IPR011032 GroES (chaperonin 10)-like CLI_RS16880 IPR018369 Chaperonin Cpn10, conserved site CLI_RS16880 IPR020818 Chaperonin Cpn10 CLI_RS16885 IPR010178 Integral membrane protein 1906 CLI_RS16890 IPR015414 SNARE associated Golgi protein CLI_RS16890 IPR032816 CLI_RS16890 CLI_RS16895 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS16895 IPR009016 Iron hydrogenase CLI_RS16895 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS16895 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS16895 IPR027631 [FeFe] hydrogenase, group B1/B3 CLI_RS16900 IPR003265 HhH-GPD domain CLI_RS16900 IPR011257 DNA glycosylase CLI_RS16900 IPR012904 8-oxoguanine DNA glycosylase, N-terminal CLI_RS16900 IPR023170 Helix-turn-helix, base-excision DNA repair, C-terminal CLI_RS16905 IPR006004 Glutamate synthase (NADPH), homotetrameric CLI_RS16905 IPR009051 Alpha-helical ferredoxin CLI_RS16905 IPR016040 NAD(P)-binding domain CLI_RS16905 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS16905 IPR028261 Dihydroprymidine dehydrogenase domain II CLI_RS16910 IPR001433 Oxidoreductase FAD/NAD(P)-binding CLI_RS16910 IPR012165 Cytochrome-c3 hydrogenase, gamma subunit CLI_RS16910 IPR017938 Riboflavin synthase-like beta-barrel CLI_RS16910 IPR019480 Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain CLI_RS16915 IPR003781 CoA-binding CLI_RS16915 IPR009718 Rex DNA-binding, C-terminal domain CLI_RS16915 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS16915 IPR016040 NAD(P)-binding domain CLI_RS16915 IPR022876 Redox-sensing transcriptional repressor Rex CLI_RS16920 IPR003439 ABC transporter-like CLI_RS16920 IPR003593 AAA+ ATPase domain CLI_RS16920 IPR017871 ABC transporter, conserved site CLI_RS16920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16920 IPR032524 CLI_RS16920 CLI_RS16920 IPR032781 CLI_RS16920 CLI_RS16925 IPR001789 Signal transduction response regulator, receiver domain CLI_RS16925 IPR007492 LytTR DNA-binding domain CLI_RS16925 IPR011006 CheY-like superfamily CLI_RS16930 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS16930 IPR010559 Signal transduction histidine kinase, internal region CLI_RS16930 IPR011620 Signal transduction histidine kinase, 5TM receptor LytS, transmembrane region CLI_RS16935 IPR003706 Carbon starvation protein CstA CLI_RS16935 IPR025299 CstA C-terminal domain CLI_RS16940 IPR007863 Peptidase M16, C-terminal domain CLI_RS16940 IPR011237 Peptidase M16 domain CLI_RS16940 IPR011249 Metalloenzyme, LuxS/M16 peptidase-like CLI_RS16940 IPR011765 Peptidase M16, N-terminal CLI_RS16940 IPR013578 Peptidase M16C associated CLI_RS16945 IPR000089 Biotin/lipoyl attachment CLI_RS16945 IPR000891 Pyruvate carboxyltransferase CLI_RS16945 IPR001882 Biotin-binding site CLI_RS16945 IPR003379 Carboxylase, conserved domain CLI_RS16945 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLI_RS16945 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CLI_RS16945 IPR005482 Biotin carboxylase, C-terminal CLI_RS16945 IPR005930 Pyruvate carboxylase CLI_RS16945 IPR009057 Homeodomain-like CLI_RS16945 IPR011053 Single hybrid motif CLI_RS16945 IPR011054 Rudiment single hybrid motif CLI_RS16945 IPR013785 Aldolase-type TIM barrel CLI_RS16945 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS16945 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS16945 IPR016185 Pre-ATP-grasp domain CLI_RS16950 IPR000905 Gcp-like domain CLI_RS16950 IPR017861 Kae1/YgjD family CLI_RS16950 IPR022450 tRNA N6-adenosine threonylcarbamoyltransferase, TsaD CLI_RS16955 IPR008822 Crossover junction endodeoxyribonuclease, RusA-like CLI_RS16960 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLI_RS16960 IPR016040 NAD(P)-binding domain CLI_RS16960 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS16970 IPR031493 CLI_RS16970 CLI_RS16980 IPR006127 Periplasmic solute binding protein family CLI_RS16980 IPR006129 Adhesin B CLI_RS16985 IPR003607 HD/PDEase domain CLI_RS16985 IPR006674 HD domain CLI_RS16990 IPR003442 tRNA threonylcarbamoyl adenosine modification protein TsaE CLI_RS16990 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS16995 IPR000905 Gcp-like domain CLI_RS16995 IPR022496 tRNA threonylcarbamoyl adenosine modification protein YeaZ CLI_RS17000 IPR000182 GNAT domain CLI_RS17000 IPR006464 Ribosomal-protein-alanine acetyltransferase CLI_RS17000 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17005 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS17005 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLI_RS17005 IPR002307 Tyrosine-tRNA ligase CLI_RS17005 IPR002942 RNA-binding S4 domain CLI_RS17005 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS17005 IPR024088 Tyrosine-tRNA ligase, bacterial-type CLI_RS17005 IPR024107 Tyrosine-tRNA ligase, bacterial-type, type 1 CLI_RS17015 IPR007421 ATPase, AAA-4 CLI_RS17015 IPR029684 Schlafen family CLI_RS17020 IPR009825 ECF transporter, substrate-specific component-like CLI_RS17030 IPR000326 Phosphatidic acid phosphatase type 2/haloperoxidase CLI_RS17030 IPR026841 CLI_RS17030 CLI_RS17035 IPR000795 Elongation factor, GTP-binding domain CLI_RS17035 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS17035 IPR004548 Peptide chain release factor 3 CLI_RS17035 IPR005225 Small GTP-binding protein domain CLI_RS17035 IPR009000 Translation protein, beta-barrel domain CLI_RS17035 IPR009022 Elongation factor G, III-V domain CLI_RS17035 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17035 IPR031157 CLI_RS17035 CLI_RS17035 IPR032090 CLI_RS17035 CLI_RS17040 IPR000150 Cof protein CLI_RS17040 IPR006379 HAD-superfamily hydrolase, subfamily IIB CLI_RS17040 IPR023214 HAD-like domain CLI_RS17045 IPR001412 Aminoacyl-tRNA synthetase, class I, conserved site CLI_RS17045 IPR002305 Aminoacyl-tRNA synthetase, class Ic CLI_RS17045 IPR002306 Tryptophan-tRNA ligase CLI_RS17045 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS17045 IPR024109 Tryptophan-tRNA ligase, bacterial-type CLI_RS17055 IPR002742 Desulfoferrodoxin, ferrous iron-binding domain CLI_RS17055 IPR004462 Desulfoferrodoxin Dfx CLI_RS17055 IPR004793 Desulfoferrodoxin CLI_RS17065 IPR005196 Glycoside hydrolase, family 65, N-terminal CLI_RS17065 IPR008928 Six-hairpin glycosidase-like CLI_RS17065 IPR009342 Putative carbohydrate binding domain CLI_RS17065 IPR010383 Glycosyltransferase 36 CLI_RS17065 IPR011013 Galactose mutarotase-like domain CLI_RS17065 IPR019282 Domain of unknown function DUF2329 CLI_RS17065 IPR033432 CLI_RS17065 CLI_RS17070 IPR000183 Ornithine/DAP/Arg decarboxylase CLI_RS17070 IPR002986 Diaminopimelate decarboxylase, LysA CLI_RS17070 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLI_RS17070 IPR022643 Orn/DAP/Arg decarboxylase 2, C-terminal CLI_RS17070 IPR022644 Orn/DAP/Arg decarboxylase 2, N-terminal CLI_RS17070 IPR029066 PLP-binding barrel CLI_RS17075 IPR001048 Aspartate/glutamate/uridylate kinase CLI_RS17075 IPR001341 Aspartate kinase domain CLI_RS17075 IPR005260 Aspartate kinase, monofunctional class CLI_RS17075 IPR018042 Aspartate kinase, conserved site CLI_RS17075 IPR027795 GATS-like ACT domain CLI_RS17080 IPR001948 Peptidase M18 CLI_RS17080 IPR023358 Peptidase M18, domain 2 CLI_RS17085 IPR002524 Cation efflux protein CLI_RS17085 IPR027469 Cation efflux protein transmembrane domain CLI_RS17085 IPR027470 Cation efflux protein cytoplasmic domain CLI_RS17090 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17095 IPR000212 DNA helicase, UvrD/REP type CLI_RS17095 IPR014016 UvrD-like Helicase, ATP-binding domain CLI_RS17095 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17100 IPR000642 Peptidase M41 CLI_RS17100 IPR003593 AAA+ ATPase domain CLI_RS17100 IPR003959 ATPase, AAA-type, core CLI_RS17100 IPR003960 ATPase, AAA-type, conserved site CLI_RS17100 IPR005936 Peptidase, FtsH CLI_RS17100 IPR011546 Peptidase M41, FtsH extracellular CLI_RS17100 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17105 IPR001261 ArgE/DapE/ACY1/CPG2/YscS, conserved site CLI_RS17105 IPR002933 Peptidase M20 CLI_RS17105 IPR010964 Peptidase M20A, peptidase V-related CLI_RS17105 IPR011650 Peptidase M20, dimerisation domain CLI_RS17110 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLI_RS17110 IPR002316 Proline-tRNA ligase, class IIa CLI_RS17110 IPR004154 Anticodon-binding CLI_RS17110 IPR004499 Proline-tRNA ligase, class IIa, archaeal-type CLI_RS17110 IPR016061 Proline-tRNA ligase, class II, C-terminal CLI_RS17110 IPR017449 Prolyl-tRNA synthetase, class II CLI_RS17115 IPR000305 GIY-YIG nuclease superfamily CLI_RS17125 IPR003439 ABC transporter-like CLI_RS17125 IPR003593 AAA+ ATPase domain CLI_RS17125 IPR017871 ABC transporter, conserved site CLI_RS17125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17135 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS17135 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17135 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS17135 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS17135 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS17135 IPR014284 RNA polymerase sigma-70 like domain CLI_RS17140 IPR001902 Sulphate anion transporter CLI_RS17140 IPR002645 STAS domain CLI_RS17140 IPR011547 Sulphate transporter CLI_RS17145 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS17145 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS17145 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS17150 IPR001789 Signal transduction response regulator, receiver domain CLI_RS17150 IPR001867 Signal transduction response regulator, C-terminal CLI_RS17150 IPR011006 CheY-like superfamily CLI_RS17150 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17155 IPR032688 CLI_RS17155 CLI_RS17160 IPR003439 ABC transporter-like CLI_RS17160 IPR003593 AAA+ ATPase domain CLI_RS17160 IPR017871 ABC transporter, conserved site CLI_RS17160 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17160 IPR032675 CLI_RS17160 CLI_RS17170 IPR007132 Protein of unknown function DUF346 CLI_RS17175 IPR008589 Protein of unknown function DUF871, prokaryotic CLI_RS17175 IPR013785 Aldolase-type TIM barrel CLI_RS17175 IPR017853 Glycoside hydrolase, superfamily CLI_RS17175 IPR029000 Cyclophilin-like domain CLI_RS17180 IPR002731 ATPase, BadF/BadG/BcrA/BcrD type CLI_RS17185 IPR003188 Phosphotransferase system, lactose/cellobiose-specific IIA subunit CLI_RS17190 IPR003501 Phosphotransferase system, EIIB component, type 2/3 CLI_RS17190 IPR013012 Phosphotransferase system, EIIB component, type 3 CLI_RS17195 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS17195 IPR003593 AAA+ ATPase domain CLI_RS17195 IPR004701 Phosphotransferase system, mannose-type IIA component CLI_RS17195 IPR011608 PRD domain CLI_RS17195 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17195 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS17195 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17200 IPR003352 Phosphotransferase system, EIIC CLI_RS17200 IPR004501 Phosphotransferase system, EIIC component, type 3 CLI_RS17200 IPR004796 Phosphotransferase system, cellobiose-type IIC component CLI_RS17205 IPR001088 Glycoside hydrolase, family 4 CLI_RS17205 IPR015955 Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal CLI_RS17205 IPR016040 NAD(P)-binding domain CLI_RS17205 IPR019802 Glycoside hydrolase, family 4, conserved site CLI_RS17205 IPR022616 Glycosyl hydrolase, family 4, C-terminal CLI_RS17210 IPR000160 GGDEF domain CLI_RS17210 IPR029151 Periplasmic sensor domain-like CLI_RS17210 IPR029787 Nucleotide cyclase CLI_RS17215 IPR002104 Integrase, catalytic CLI_RS17215 IPR011010 DNA breaking-rejoining enzyme, catalytic core CLI_RS17215 IPR013762 Integrase-like, catalytic core CLI_RS17220 IPR003826 S-adenosylmethionine decarboxylase family, prokaryotic CLI_RS17220 IPR016067 S-adenosylmethionine decarboxylase, core CLI_RS17220 IPR017716 S-adenosylmethionine decarboxylase proenzyme CLI_RS17225 IPR002723 Protein of unknown function DUF43 CLI_RS17225 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17225 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS17230 IPR009057 Homeodomain-like CLI_RS17230 IPR014875 Mor transcription activator CLI_RS17235 IPR002577 Helix-turn-helix, HxlR type CLI_RS17235 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17240 IPR002563 Flavin reductase-like, FMN-binding CLI_RS17240 IPR012349 FMN-binding split barrel CLI_RS17245 IPR008030 NmrA-like domain CLI_RS17245 IPR016040 NAD(P)-binding domain CLI_RS17250 IPR001395 Aldo/keto reductase CLI_RS17250 IPR018170 Aldo/keto reductase, conserved site CLI_RS17250 IPR020471 Aldo/keto reductase subgroup CLI_RS17250 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17255 IPR005025 NADPH-dependent FMN reductase-like CLI_RS17255 IPR029039 Flavoprotein-like CLI_RS17260 IPR000551 MerR-type HTH domain CLI_RS17260 IPR009061 DNA binding domain, putative CLI_RS17270 IPR006750 Protein of unknown function DUF606 CLI_RS17275 IPR000944 Transcription regulator Rrf2-like CLI_RS17275 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17280 IPR000182 GNAT domain CLI_RS17280 IPR016181 Acyl-CoA N-acyltransferase CLI_RS17285 IPR001566 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD CLI_RS17285 IPR002792 TRAM domain CLI_RS17285 IPR010280 (Uracil-5)-methyltransferase family CLI_RS17285 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17285 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS17285 IPR030390 CLI_RS17285 CLI_RS17285 IPR030391 CLI_RS17285 CLI_RS17290 IPR011437 Domain of unknown function DUF1540 CLI_RS17295 IPR001395 Aldo/keto reductase CLI_RS17295 IPR009051 Alpha-helical ferredoxin CLI_RS17295 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS17295 IPR020471 Aldo/keto reductase subgroup CLI_RS17295 IPR023210 NADP-dependent oxidoreductase domain CLI_RS17300 IPR001697 Pyruvate kinase CLI_RS17300 IPR008279 PEP-utilising enzyme, mobile domain CLI_RS17300 IPR011037 Pyruvate kinase-like, insert domain CLI_RS17300 IPR015793 Pyruvate kinase, barrel CLI_RS17300 IPR015794 Pyruvate kinase, alpha/beta CLI_RS17300 IPR015795 Pyruvate kinase, C-terminal CLI_RS17300 IPR015806 Pyruvate kinase, beta-barrel insert domain CLI_RS17300 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLI_RS17300 IPR018209 Pyruvate kinase, active site CLI_RS17305 IPR000023 Phosphofructokinase domain CLI_RS17305 IPR012003 ATP-dependent phosphofructokinase, prokaryotic-type CLI_RS17305 IPR012828 6-phosphofructokinase CLI_RS17305 IPR015912 Phosphofructokinase, conserved site CLI_RS17305 IPR022953 Phosphofructokinase CLI_RS17310 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLI_RS17310 IPR004013 PHP, C-terminal CLI_RS17310 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLI_RS17310 IPR004805 DNA polymerase III, alpha subunit CLI_RS17310 IPR011708 Bacterial DNA polymerase III, alpha subunit CLI_RS17310 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17310 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS17310 IPR029460 DNA polymerase, helix-hairpin-helix motif CLI_RS17315 IPR003802 Sporulation regulator WhiA CLI_RS17315 IPR018478 Sporulation transcription regulator WhiA, N-terminal domain CLI_RS17315 IPR023054 Sporulation regulator WhiA, C-terminal CLI_RS17315 IPR027434 Homing endonuclease CLI_RS17320 IPR002882 LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 CLI_RS17320 IPR010119 Gluconeogenesis factor CLI_RS17325 IPR005337 ATPase, P-loop-containing CLI_RS17325 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17330 IPR003170 UDP-N-acetylenolpyruvoylglucosamine reductase CLI_RS17330 IPR006094 FAD linked oxidase, N-terminal CLI_RS17330 IPR011601 UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal CLI_RS17330 IPR016166 FAD-binding, type 2 CLI_RS17330 IPR016167 FAD-binding, type 2, subdomain 1 CLI_RS17330 IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2 CLI_RS17335 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLI_RS17335 IPR004013 PHP, C-terminal CLI_RS17335 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS17335 IPR023710 Probable phosphatase YcdX CLI_RS17340 IPR000305 GIY-YIG nuclease superfamily CLI_RS17340 IPR001162 UvrC family homology region CLI_RS17340 IPR001943 UVR domain CLI_RS17340 IPR004791 UvrABC system, subunit C CLI_RS17340 IPR010994 RuvA domain 2-like CLI_RS17340 IPR027299 GIY-YIG domain CLI_RS17345 IPR007404 Protein of unknown function DUF457 CLI_RS17350 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLI_RS17350 IPR006674 HD domain CLI_RS17350 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17355 IPR001460 Penicillin-binding protein, transpeptidase CLI_RS17355 IPR002137 Beta-lactamase, class-D active site CLI_RS17355 IPR005311 Penicillin-binding protein, dimerisation domain CLI_RS17355 IPR012338 Beta-lactamase/transpeptidase-like CLI_RS17360 IPR001182 Cell cycle protein FtsW/RodA CLI_RS17365 IPR000253 Forkhead-associated (FHA) domain CLI_RS17365 IPR008984 SMAD/FHA domain CLI_RS17370 IPR003439 ABC transporter-like CLI_RS17370 IPR004602 UvrABC system subunit A CLI_RS17370 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS17370 IPR017871 ABC transporter, conserved site CLI_RS17370 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17375 IPR001650 Helicase, C-terminal CLI_RS17375 IPR001943 UVR domain CLI_RS17375 IPR004807 UvrABC system, subunit B CLI_RS17375 IPR006935 Helicase/UvrB domain CLI_RS17375 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS17375 IPR024759 UvrB, YAD/RRR-motif-containing domain CLI_RS17375 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17380 IPR001478 PDZ domain CLI_RS17385 IPR001478 PDZ domain CLI_RS17385 IPR004447 C-terminal-processing peptidase S41A CLI_RS17385 IPR005151 Tail specific protease CLI_RS17385 IPR029045 ClpP/crotonase-like domain CLI_RS17390 IPR003838 Permease FtsX-like CLI_RS17390 IPR004513 ABC transporter, cell division protein FtsX CLI_RS17395 IPR003439 ABC transporter-like CLI_RS17395 IPR003593 AAA+ ATPase domain CLI_RS17395 IPR005286 Cell division protein FtsE, ATP-binding CLI_RS17395 IPR017871 ABC transporter, conserved site CLI_RS17395 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17400 IPR003740 Membrane Protein of unknown function DUF161 CLI_RS17400 IPR019264 Domain of unknown function DUF2179 CLI_RS17410 IPR005475 Transketolase-like, pyrimidine-binding domain CLI_RS17410 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLI_RS17410 IPR029061 Thiamin diphosphate-binding fold CLI_RS17410 IPR033247 CLI_RS17410 CLI_RS17410 IPR033248 CLI_RS17410 CLI_RS17415 IPR005474 Transketolase, N-terminal CLI_RS17415 IPR029061 Thiamin diphosphate-binding fold CLI_RS17415 IPR033247 CLI_RS17415 CLI_RS17420 IPR003477 mRNA interferase PemK-like protein CLI_RS17420 IPR011067 Plasmid maintenance toxin/Cell growth inhibitor CLI_RS17425 IPR010985 Ribbon-helix-helix CLI_RS17430 IPR000821 Alanine racemase CLI_RS17430 IPR001608 Alanine racemase, N-terminal CLI_RS17430 IPR009006 Alanine racemase/group IV decarboxylase, C-terminal CLI_RS17430 IPR011079 Alanine racemase, C-terminal CLI_RS17430 IPR020622 Alanine racemase, pyridoxal-phosphate attachment site CLI_RS17430 IPR029066 PLP-binding barrel CLI_RS17435 IPR014584 Uncharacterised conserved protein UCP033729 CLI_RS17435 IPR029046 Lipoprotein localisation LolA/LolB/LppX CLI_RS17440 IPR000631 YjeF C-terminal domain CLI_RS17440 IPR004443 YjeF N-terminal domain CLI_RS17440 IPR029056 Ribokinase-like CLI_RS17440 IPR030677 CLI_RS17440 CLI_RS17445 IPR002582 Holo-[acyl carrier protein] synthase CLI_RS17445 IPR004568 Phosphopantethiene-protein transferase domain CLI_RS17445 IPR008278 4'-phosphopantetheinyl transferase superfamily CLI_RS17450 IPR017016 Uncharacterised conserved protein UCP033595 CLI_RS17455 IPR001991 Sodium:dicarboxylate symporter CLI_RS17455 IPR018461 Na+/H+ antiporter, NhaC-like CLI_RS17460 IPR017039 Virulence factor BrkB CLI_RS17470 IPR001912 Ribosomal protein S4/S9, N-terminal CLI_RS17470 IPR002942 RNA-binding S4 domain CLI_RS17470 IPR005709 Ribosomal protein S4, bacterial-type CLI_RS17470 IPR022801 Ribosomal protein S4/S9 CLI_RS17475 IPR001991 Sodium:dicarboxylate symporter CLI_RS17480 IPR009078 Ferritin-like superfamily CLI_RS17480 IPR012347 Ferritin-related CLI_RS17480 IPR012851 Spore coat protein CotF-like CLI_RS17485 IPR001347 Sugar isomerase (SIS) CLI_RS17485 IPR005855 Glucosamine-fructose-6-phosphate aminotransferase, isomerising CLI_RS17485 IPR029055 Nucleophile aminohydrolases, N-terminal CLI_RS17490 IPR001585 Transaldolase CLI_RS17490 IPR013785 Aldolase-type TIM barrel CLI_RS17490 IPR018225 Transaldolase, active site CLI_RS17495 IPR006439 HAD hydrolase, subfamily IA CLI_RS17495 IPR023214 HAD-like domain CLI_RS17500 IPR002347 Glucose/ribitol dehydrogenase CLI_RS17500 IPR016040 NAD(P)-binding domain CLI_RS17500 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLI_RS17505 IPR004716 Phosphotransferase system, glucitol/sorbitol-specific IIA component CLI_RS17510 IPR004702 Phosphotransferease, sorbitol phosphotransferase enzyme II CLI_RS17510 IPR011618 Sorbitol phosphotransferase enzyme II, N-terminal CLI_RS17510 IPR011638 Sorbitol phosphotransferase enzyme II, C-terminal CLI_RS17515 IPR004699 Phosphotransferase system, enzyme II sorbitol-specific factor CLI_RS17520 IPR009693 Glucitol operon activator CLI_RS17525 IPR002085 Alcohol dehydrogenase superfamily, zinc-type CLI_RS17525 IPR002328 Alcohol dehydrogenase, zinc-type, conserved site CLI_RS17525 IPR011032 GroES (chaperonin 10)-like CLI_RS17525 IPR013149 Alcohol dehydrogenase, C-terminal CLI_RS17525 IPR013154 Alcohol dehydrogenase GroES-like CLI_RS17525 IPR016040 NAD(P)-binding domain CLI_RS17525 IPR020843 Polyketide synthase, enoylreductase CLI_RS17530 IPR007324 Sugar-binding domain, putative CLI_RS17530 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17535 IPR005841 Alpha-D-phosphohexomutase superfamily CLI_RS17535 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLI_RS17535 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLI_RS17535 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLI_RS17535 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLI_RS17535 IPR006352 Phosphoglucosamine mutase CLI_RS17535 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLI_RS17535 IPR016066 Alpha-D-phosphohexomutase, conserved site CLI_RS17540 IPR002869 Pyruvate-flavodoxin oxidoreductase, central domain CLI_RS17540 IPR011894 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate CLI_RS17540 IPR019752 Pyruvate/ketoisovalerate oxidoreductase, catalytic domain CLI_RS17545 IPR011766 Thiamine pyrophosphate enzyme, C-terminal TPP-binding CLI_RS17545 IPR029061 Thiamin diphosphate-binding fold CLI_RS17550 IPR002880 Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal CLI_RS17550 IPR009014 Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II CLI_RS17550 IPR029061 Thiamin diphosphate-binding fold CLI_RS17550 IPR033412 CLI_RS17550 CLI_RS17555 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS17555 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS17560 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17565 IPR000890 Aliphatic acid kinase, short-chain CLI_RS17565 IPR011245 Butyrate kinase CLI_RS17565 IPR023865 Aliphatic acid kinase, short-chain, conserved site CLI_RS17570 IPR002505 Phosphate acetyl/butaryl transferase CLI_RS17570 IPR012147 Phosphate acetyl/butyryltransferase CLI_RS17570 IPR014079 Phosphate butyryltransferase CLI_RS17575 IPR000890 Aliphatic acid kinase, short-chain CLI_RS17575 IPR011245 Butyrate kinase CLI_RS17575 IPR023865 Aliphatic acid kinase, short-chain, conserved site CLI_RS17580 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS17580 IPR028348 FAD dependent protein CLI_RS17585 IPR012505 YbbR-like CLI_RS17590 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLI_RS17590 IPR014046 Diadenylate cyclase-like CLI_RS17595 IPR011105 Cell wall hydrolase, SleB CLI_RS17600 IPR000103 Pyridine nucleotide-disulphide oxidoreductase, class-II CLI_RS17600 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS17605 IPR005746 Thioredoxin CLI_RS17605 IPR012336 Thioredoxin-like fold CLI_RS17605 IPR013766 Thioredoxin domain CLI_RS17605 IPR017937 Thioredoxin, conserved site CLI_RS17610 IPR006680 Amidohydrolase 1 CLI_RS17610 IPR010229 Peptidase M38, beta-aspartyl dipeptidase CLI_RS17610 IPR011059 Metal-dependent hydrolase, composite domain CLI_RS17610 IPR032466 CLI_RS17610 CLI_RS17615 IPR001440 Tetratricopeptide TPR1 CLI_RS17615 IPR011990 Tetratricopeptide-like helical domain CLI_RS17615 IPR019734 Tetratricopeptide repeat CLI_RS17620 IPR028102 Protein of unknown function DUF4652 CLI_RS17625 IPR000121 PEP-utilising enzyme, C-terminal CLI_RS17625 IPR006318 Phosphoenolpyruvate-utilising enzyme CLI_RS17625 IPR008279 PEP-utilising enzyme, mobile domain CLI_RS17625 IPR008731 Phosphotransferase system, enzyme I N-terminal CLI_RS17625 IPR015813 Pyruvate/Phosphoenolpyruvate kinase-like domain CLI_RS17625 IPR018274 PEP-utilising enzyme, active site CLI_RS17625 IPR023151 PEP-utilising enzyme, conserved site CLI_RS17625 IPR024692 Phosphotransferase system, enzyme I CLI_RS17630 IPR000014 PAS domain CLI_RS17630 IPR000032 Phosphocarrier HPr protein-like CLI_RS17630 IPR002078 RNA polymerase sigma factor 54 interaction domain CLI_RS17630 IPR003593 AAA+ ATPase domain CLI_RS17630 IPR009057 Homeodomain-like CLI_RS17630 IPR013767 PAS fold CLI_RS17630 IPR025662 Sigma-54 interaction domain, ATP-binding site 1 CLI_RS17630 IPR025943 Sigma-54 interaction domain, ATP-binding site 2 CLI_RS17630 IPR025944 Sigma-54 interaction domain, conserved site CLI_RS17630 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17635 IPR011990 Tetratricopeptide-like helical domain CLI_RS17635 IPR019734 Tetratricopeptide repeat CLI_RS17640 IPR004647 Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain CLI_RS17645 IPR004646 Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain CLI_RS17650 IPR002508 Cell wall hydrolase/autolysin, catalytic CLI_RS17650 IPR014234 N-acetylmuramoyl-L-alanine amidase CwlD CLI_RS17655 IPR003841 Sodium-dependent phosphate transport protein CLI_RS17655 IPR004633 Na/Pi-cotransporter II-related/YqeW-like protein CLI_RS17655 IPR026022 PhoU domain CLI_RS17660 IPR000754 Ribosomal protein S9 CLI_RS17660 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17660 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17660 IPR020574 Ribosomal protein S9, conserved site CLI_RS17660 IPR023035 Ribosomal protein S9, bacterial/plastid CLI_RS17665 IPR005822 Ribosomal protein L13 CLI_RS17665 IPR005823 Ribosomal protein L13, bacterial-type CLI_RS17665 IPR023563 Ribosomal protein L13, conserved site CLI_RS17665 IPR023564 Ribosomal protein L13 domain CLI_RS17670 IPR001406 Pseudouridine synthase I, TruA CLI_RS17670 IPR020094 Pseudouridine synthase I, TruA, N-terminal CLI_RS17670 IPR020095 Pseudouridine synthase I, TruA, C-terminal CLI_RS17670 IPR020097 Pseudouridine synthase I, TruA, alpha/beta domain CLI_RS17670 IPR020103 Pseudouridine synthase, catalytic domain CLI_RS17675 IPR003339 ABC/ECF transporter, transmembrane component CLI_RS17675 IPR024919 ECF transporter transmembrane protein EcfT CLI_RS17680 IPR003439 ABC transporter-like CLI_RS17680 IPR003593 AAA+ ATPase domain CLI_RS17680 IPR017871 ABC transporter, conserved site CLI_RS17680 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17680 IPR030946 CLI_RS17680 CLI_RS17685 IPR003439 ABC transporter-like CLI_RS17685 IPR003593 AAA+ ATPase domain CLI_RS17685 IPR017871 ABC transporter, conserved site CLI_RS17685 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17685 IPR030947 CLI_RS17685 CLI_RS17690 IPR000456 Ribosomal protein L17 CLI_RS17695 IPR009025 DNA-directed RNA polymerase, RBP11-like dimerisation domain CLI_RS17695 IPR011260 RNA polymerase, alpha subunit, C-terminal CLI_RS17695 IPR011262 DNA-directed RNA polymerase, insert domain CLI_RS17695 IPR011263 DNA-directed RNA polymerase, RpoA/D/Rpb3-type CLI_RS17695 IPR011773 DNA-directed RNA polymerase, alpha subunit CLI_RS17700 IPR001912 Ribosomal protein S4/S9, N-terminal CLI_RS17700 IPR002942 RNA-binding S4 domain CLI_RS17700 IPR005709 Ribosomal protein S4, bacterial-type CLI_RS17700 IPR018079 Ribosomal protein S4, conserved site CLI_RS17700 IPR022801 Ribosomal protein S4/S9 CLI_RS17705 IPR001971 Ribosomal protein S11 CLI_RS17705 IPR018102 Ribosomal S11, conserved site CLI_RS17705 IPR019981 Ribosomal protein S11, bacterial-type CLI_RS17710 IPR001892 Ribosomal protein S13 CLI_RS17710 IPR010979 Ribosomal protein S13-like, H2TH CLI_RS17710 IPR018269 Ribosomal protein S13, conserved site CLI_RS17710 IPR019980 Ribosomal protein S13, bacterial-type CLI_RS17710 IPR027437 30s ribosomal protein S13, C-terminal CLI_RS17715 IPR000473 Ribosomal protein L36 CLI_RS17720 IPR004368 Translation initiation factor IF-1 CLI_RS17720 IPR006196 RNA-binding domain, S1, IF1 type CLI_RS17720 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17720 IPR022967 RNA-binding domain, S1 CLI_RS17725 IPR008991 Translation protein SH3-like domain CLI_RS17725 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17730 IPR000994 Peptidase M24, structural domain CLI_RS17730 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS17730 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLI_RS17735 IPR000850 Adenylate kinase/UMP-CMP kinase CLI_RS17735 IPR006259 Adenylate kinase subfamily CLI_RS17735 IPR007862 Adenylate kinase, active site lid domain CLI_RS17735 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17740 IPR002208 SecY/SEC61-alpha family CLI_RS17740 IPR023201 SecY subunit domain CLI_RS17740 IPR026593 Protein translocase subunit SecY CLI_RS17740 IPR030659 CLI_RS17740 CLI_RS17745 IPR001196 Ribosomal protein L15, conserved site CLI_RS17745 IPR005749 Ribosomal protein L15, bacterial-type CLI_RS17745 IPR021131 Ribosomal protein L18e/L15P CLI_RS17745 IPR030878 CLI_RS17745 CLI_RS17750 IPR005996 Ribosomal protein L30, bacterial-type CLI_RS17750 IPR016082 Ribosomal protein L30, ferredoxin-like fold domain CLI_RS17755 IPR000851 Ribosomal protein S5 CLI_RS17755 IPR005324 Ribosomal protein S5, C-terminal CLI_RS17755 IPR005712 Ribosomal protein S5, bacterial-type CLI_RS17755 IPR013810 Ribosomal protein S5, N-terminal CLI_RS17755 IPR014720 Double-stranded RNA-binding domain CLI_RS17755 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17755 IPR018192 Ribosomal protein S5, N-terminal, conserved site CLI_RS17755 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17760 IPR004389 Ribosomal protein L18, bacterial-type CLI_RS17760 IPR005484 Ribosomal protein L18/L5 CLI_RS17765 IPR000702 Ribosomal protein L6 CLI_RS17765 IPR002358 Ribosomal protein L6, conserved site CLI_RS17765 IPR019906 Ribosomal protein L6, bacterial-type CLI_RS17765 IPR020040 Ribosomal protein L6, alpha-beta domain CLI_RS17770 IPR000630 Ribosomal protein S8 CLI_RS17775 IPR001209 Ribosomal protein S14 CLI_RS17775 IPR023053 Ribosomal protein S14, type Z CLI_RS17780 IPR002132 Ribosomal protein L5 CLI_RS17780 IPR020929 Ribosomal protein L5, conserved site CLI_RS17780 IPR020930 Ribosomal protein L5, bacterial-type CLI_RS17780 IPR022803 Ribosomal protein L5 domain CLI_RS17780 IPR031309 CLI_RS17780 CLI_RS17780 IPR031310 CLI_RS17780 CLI_RS17785 IPR003256 Ribosomal protein L24 CLI_RS17785 IPR005824 KOW CLI_RS17785 IPR008991 Translation protein SH3-like domain CLI_RS17785 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17790 IPR000218 Ribosomal protein L14b/L23e CLI_RS17790 IPR005745 Ribosomal protein L14, bacterial-type CLI_RS17790 IPR019972 Ribosomal protein L14 conserved site CLI_RS17795 IPR000266 Ribosomal protein S17 CLI_RS17795 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17795 IPR019984 Ribosomal protein S17, bacterial-type CLI_RS17800 IPR001854 Ribosomal protein L29 CLI_RS17800 IPR018254 Ribosomal protein L29, conserved site CLI_RS17805 IPR000114 Ribosomal protein L16 CLI_RS17805 IPR016180 Ribosomal protein L10e/L16 CLI_RS17805 IPR020798 Ribosomal protein L16, conserved site CLI_RS17810 IPR001351 Ribosomal protein S3, C-terminal CLI_RS17810 IPR004044 K Homology domain, type 2 CLI_RS17810 IPR004087 K Homology domain CLI_RS17810 IPR005704 Ribosomal protein S3, bacterial CLI_RS17810 IPR009019 K homology domain, prokaryotic type CLI_RS17810 IPR015946 K homology domain-like, alpha/beta CLI_RS17810 IPR018280 Ribosomal protein S3, conserved site CLI_RS17815 IPR001063 Ribosomal protein L22/L17 CLI_RS17815 IPR005727 Ribosomal protein L22, bacterial/chloroplast-type CLI_RS17815 IPR018260 Ribosomal protein L22/L17, conserved site CLI_RS17820 IPR002222 Ribosomal protein S19/S15 CLI_RS17820 IPR005732 Ribosomal protein S19, bacterial-type CLI_RS17820 IPR020934 Ribosomal protein S19 conserved site CLI_RS17820 IPR023575 Ribosomal protein S19, superfamily CLI_RS17825 IPR002171 Ribosomal protein L2 CLI_RS17825 IPR005880 Ribosomal protein L2, bacterial/organellar-type CLI_RS17825 IPR008991 Translation protein SH3-like domain CLI_RS17825 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17825 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17825 IPR014726 Ribosomal protein L2, domain 3 CLI_RS17825 IPR022666 Ribosomal Proteins L2, RNA binding domain CLI_RS17825 IPR022669 Ribosomal protein L2, C-terminal CLI_RS17825 IPR022671 Ribosomal protein L2, conserved site CLI_RS17830 IPR001014 Ribosomal protein L23/L25, conserved site CLI_RS17830 IPR012677 Nucleotide-binding, alpha-beta plait CLI_RS17830 IPR012678 Ribosomal protein L23/L15e core domain CLI_RS17830 IPR013025 Ribosomal protein L25/L23 CLI_RS17835 IPR002136 Ribosomal protein L4/L1e CLI_RS17835 IPR013005 Ribosomal protein L4/L1e, bacterial-type CLI_RS17835 IPR023574 Ribosomal protein L4 domain CLI_RS17840 IPR000597 Ribosomal protein L3 CLI_RS17840 IPR009000 Translation protein, beta-barrel domain CLI_RS17840 IPR019926 Ribosomal protein L3, conserved site CLI_RS17840 IPR019927 Ribosomal protein L3, bacterial/organelle-type CLI_RS17845 IPR001848 Ribosomal protein S10 CLI_RS17845 IPR018268 Ribosomal protein S10, conserved site CLI_RS17845 IPR027486 Ribosomal protein S10 domain CLI_RS17850 IPR000795 Elongation factor, GTP-binding domain CLI_RS17850 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLI_RS17850 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS17850 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLI_RS17850 IPR005225 Small GTP-binding protein domain CLI_RS17850 IPR009000 Translation protein, beta-barrel domain CLI_RS17850 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLI_RS17850 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17850 IPR031157 CLI_RS17850 CLI_RS17855 IPR000640 Translation elongation factor EFG, V domain CLI_RS17855 IPR000795 Elongation factor, GTP-binding domain CLI_RS17855 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS17855 IPR004540 Translation elongation factor EFG/EF2 CLI_RS17855 IPR005225 Small GTP-binding protein domain CLI_RS17855 IPR005517 Translation elongation factor EFG/EF2, domain IV CLI_RS17855 IPR009000 Translation protein, beta-barrel domain CLI_RS17855 IPR009022 Elongation factor G, III-V domain CLI_RS17855 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17855 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17855 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17855 IPR031157 CLI_RS17855 CLI_RS17860 IPR000235 Ribosomal protein S5/S7 CLI_RS17860 IPR005717 Ribosomal protein S7, bacterial/organellar-type CLI_RS17860 IPR020606 Ribosomal protein S7, conserved site CLI_RS17860 IPR023798 Ribosomal protein S7 domain CLI_RS17865 IPR005679 Ribosomal protein S12, bacteria CLI_RS17865 IPR006032 Ribosomal protein S12/S23 CLI_RS17865 IPR012340 Nucleic acid-binding, OB-fold CLI_RS17870 IPR004038 Ribosomal protein L7Ae/L30e/S12e/Gadd45 CLI_RS17870 IPR029064 50S ribosomal protein L30e-like CLI_RS17875 IPR000722 RNA polymerase, alpha subunit CLI_RS17875 IPR006592 RNA polymerase, N-terminal CLI_RS17875 IPR007066 RNA polymerase Rpb1, domain 3 CLI_RS17875 IPR007080 RNA polymerase Rpb1, domain 1 CLI_RS17875 IPR007081 RNA polymerase Rpb1, domain 5 CLI_RS17875 IPR007083 RNA polymerase Rpb1, domain 4 CLI_RS17875 IPR012754 DNA-directed RNA polymerase, subunit beta-prime CLI_RS17880 IPR007120 DNA-directed RNA polymerase, subunit 2, domain 6 CLI_RS17880 IPR007121 RNA polymerase, beta subunit, conserved site CLI_RS17880 IPR007641 RNA polymerase Rpb2, domain 7 CLI_RS17880 IPR007642 RNA polymerase Rpb2, domain 2 CLI_RS17880 IPR007644 RNA polymerase, beta subunit, protrusion CLI_RS17880 IPR007645 RNA polymerase Rpb2, domain 3 CLI_RS17880 IPR010243 DNA-directed RNA polymerase, beta subunit CLI_RS17880 IPR014724 RNA polymerase Rpb2, OB-fold CLI_RS17880 IPR015712 DNA-directed RNA polymerase, subunit 2 CLI_RS17880 IPR019462 DNA-directed RNA polymerase, beta subunit, external 1 domain CLI_RS17885 IPR000206 Ribosomal protein L7/L12 CLI_RS17885 IPR008932 Ribosomal protein L7/L12, oligomerisation CLI_RS17885 IPR013823 Ribosomal protein L7/L12, C-terminal CLI_RS17885 IPR014719 Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-like CLI_RS17890 IPR001790 Ribosomal protein L10/acidic P0 CLI_RS17890 IPR022973 Ribosomal protein L10 CLI_RS17895 IPR002143 Ribosomal protein L1 CLI_RS17895 IPR005878 Ribosomal protein L1, bacterial-type CLI_RS17895 IPR016094 Ribosomal protein L1, 2-layer alpha/beta-sandwich CLI_RS17895 IPR016095 Ribosomal protein L1, 3-layer alpha/beta-sandwich CLI_RS17895 IPR023673 Ribosomal protein L1, conserved site CLI_RS17895 IPR023674 Ribosomal protein L1-like CLI_RS17895 IPR028364 Ribosomal protein L1/ribosomal biogenesis protein CLI_RS17900 IPR000911 Ribosomal protein L11/L12 CLI_RS17900 IPR006519 Ribosomal protein L11, bacterial-type CLI_RS17900 IPR020783 Ribosomal protein L11, C-terminal CLI_RS17900 IPR020784 Ribosomal protein L11, N-terminal CLI_RS17905 IPR001062 Transcription antitermination protein, NusG CLI_RS17905 IPR005824 KOW CLI_RS17905 IPR006645 NusG, N-terminal CLI_RS17905 IPR008991 Translation protein SH3-like domain CLI_RS17905 IPR014722 Ribosomal protein L2 domain 2 CLI_RS17905 IPR015869 Transcription antitermination protein, NusG, bacteria, conserved site CLI_RS17910 IPR001901 Protein translocase complex, SecE/Sec61-gamma subunit CLI_RS17910 IPR005807 SecE subunit of protein translocation complex CLI_RS17910 IPR022943 Preprotein translocase subunit SecE CLI_RS17915 IPR001705 Ribosomal protein L33 CLI_RS17915 IPR011332 Zinc-binding ribosomal protein CLI_RS17915 IPR018264 Ribosomal protein L33, conserved site CLI_RS17920 IPR000795 Elongation factor, GTP-binding domain CLI_RS17920 IPR004160 Translation elongation factor EFTu/EF1A, C-terminal CLI_RS17920 IPR004161 Translation elongation factor EFTu/EF1A, domain 2 CLI_RS17920 IPR004541 Translation elongation factor EFTu/EF1A, bacterial/organelle CLI_RS17920 IPR005225 Small GTP-binding protein domain CLI_RS17920 IPR009000 Translation protein, beta-barrel domain CLI_RS17920 IPR009001 Translation elongation factor EF1A/initiation factor IF2gamma, C-terminal CLI_RS17920 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS17920 IPR031157 CLI_RS17920 CLI_RS17935 IPR000792 Transcription regulator LuxR, C-terminal CLI_RS17935 IPR007627 RNA polymerase sigma-70 region 2 CLI_RS17935 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS17935 IPR013249 RNA polymerase sigma factor 70, region 4 type 2 CLI_RS17935 IPR013324 RNA polymerase sigma factor, region 3/4 CLI_RS17935 IPR013325 RNA polymerase sigma factor, region 2 CLI_RS17935 IPR014218 RNA polymerase sigma-H type CLI_RS17935 IPR014284 RNA polymerase sigma-70 like domain CLI_RS17935 IPR016371 RNA polymerase sigma-H factor CLI_RS17940 IPR010298 Protein of unknown function DUF901 CLI_RS17945 IPR001537 tRNA/rRNA methyltransferase, SpoU type CLI_RS17945 IPR004441 RNA methyltransferase TrmH family CLI_RS17945 IPR013123 RNA 2-O ribose methyltransferase, substrate binding CLI_RS17945 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS17945 IPR029028 Alpha/beta knot methyltransferases CLI_RS17945 IPR029064 50S ribosomal protein L30e-like CLI_RS17950 IPR003669 Thymidylate synthase ThyX CLI_RS17955 IPR000999 Ribonuclease III domain CLI_RS17955 IPR008226 Mini-ribonuclease 3 family CLI_RS17960 IPR009080 Aminoacyl-tRNA synthetase, class 1a, anticodon-binding CLI_RS17960 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS17960 IPR015273 Cysteinyl-tRNA synthetase, class Ia, DALR CLI_RS17960 IPR015803 Cysteine-tRNA ligase CLI_RS17960 IPR024909 Cysteinyl-tRNA synthetase/mycothiol ligase CLI_RS17960 IPR032678 CLI_RS17960 CLI_RS17965 IPR000634 Serine/threonine dehydratase, pyridoxal-phosphate-binding site CLI_RS17965 IPR001926 Tryptophan synthase beta subunit-like PLP-dependent enzyme CLI_RS17965 IPR005789 Threonine dehydratase, catabolic CLI_RS17970 IPR004154 Anticodon-binding CLI_RS17970 IPR007214 YbaK/aminoacyl-tRNA synthetase-associated domain CLI_RS17975 IPR001228 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase CLI_RS17975 IPR018294 4-diphosphocytidyl-2C-methyl-D-erythritol synthase, conserved site CLI_RS17975 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS17980 IPR002716 PIN domain CLI_RS17980 IPR002792 TRAM domain CLI_RS17980 IPR029060 PIN domain-like CLI_RS17990 IPR003390 DNA integrity scanning protein, DisA, N-terminal CLI_RS17990 IPR010994 RuvA domain 2-like CLI_RS17990 IPR018906 DNA integrity scanning, DisA, linker region CLI_RS17990 IPR023763 DNA integrity scanning protein, DisA CLI_RS17995 IPR003593 AAA+ ATPase domain CLI_RS17995 IPR004504 DNA repair protein RadA CLI_RS17995 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS17995 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS17995 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 IPR001270 ClpA/B family CLI_RS18000 IPR001943 UVR domain CLI_RS18000 IPR003593 AAA+ ATPase domain CLI_RS18000 IPR003959 ATPase, AAA-type, core CLI_RS18000 IPR004176 Clp, N-terminal CLI_RS18000 IPR018368 ClpA/B, conserved site 1 CLI_RS18000 IPR019489 Clp ATPase, C-terminal CLI_RS18000 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18000 IPR028299 ClpA/B, conserved site 2 CLI_RS18005 IPR000749 CLI_RS18005 CLI_RS18005 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLI_RS18005 IPR022414 ATP:guanido phosphotransferase, catalytic domain CLI_RS18005 IPR022415 ATP:guanido phosphotransferase active site CLI_RS18005 IPR023660 ATP:guanido phosphotransferase, bacterial CLI_RS18010 IPR001943 UVR domain CLI_RS18010 IPR025542 YacH protein CLI_RS18015 IPR008463 Transcriptional repressor of class III stress genes CLI_RS18025 IPR000640 Translation elongation factor EFG, V domain CLI_RS18025 IPR000795 Elongation factor, GTP-binding domain CLI_RS18025 IPR004540 Translation elongation factor EFG/EF2 CLI_RS18025 IPR005225 Small GTP-binding protein domain CLI_RS18025 IPR005517 Translation elongation factor EFG/EF2, domain IV CLI_RS18025 IPR009000 Translation protein, beta-barrel domain CLI_RS18025 IPR009022 Elongation factor G, III-V domain CLI_RS18025 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18025 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18025 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18085 IPR004101 Mur ligase, C-terminal CLI_RS18085 IPR005762 UDP-N-acetylmuramoylalanine-D-glutamate ligase CLI_RS18085 IPR013221 Mur ligase, central CLI_RS18085 IPR016040 NAD(P)-binding domain CLI_RS18095 IPR002314 Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain CLI_RS18095 IPR002315 Glycyl-tRNA synthetase CLI_RS18095 IPR004154 Anticodon-binding CLI_RS18095 IPR022961 Glycine-tRNA ligase, bacterial CLI_RS18095 IPR027031 Glycyl-tRNA synthetase/DNA polymerase subunit gamma-2 CLI_RS18100 IPR002313 Lysine-tRNA ligase, class II CLI_RS18100 IPR004364 Aminoacyl-tRNA synthetase, class II (D/K/N) CLI_RS18100 IPR004365 OB-fold nucleic acid binding domain, AA-tRNA synthetase-type CLI_RS18100 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18100 IPR018149 Lysyl-tRNA synthetase, class II, C-terminal CLI_RS18100 IPR018150 Aminoacyl-tRNA synthetase, class II (D/K/N)-like CLI_RS18105 IPR001437 Transcription elongation factor, GreA/GreB, C-terminal CLI_RS18105 IPR006359 Transcription elongation factor GreA CLI_RS18105 IPR018151 Transcription elongation factor, GreA/GreB, conserved site CLI_RS18105 IPR022691 Transcription elongation factor, GreA/GreB, N-terminal CLI_RS18105 IPR023459 Transcription elongation factor GreA/GreB family CLI_RS18105 IPR028624 Transcription elongation factor GreA/GreB CLI_RS18115 IPR001269 tRNA-dihydrouridine synthase CLI_RS18115 IPR004652 tRNA-dihydrouridine synthase, TIM-barrel, NifR3 CLI_RS18115 IPR013785 Aldolase-type TIM barrel CLI_RS18115 IPR018517 tRNA-dihydrouridine synthase, conserved site CLI_RS18115 IPR024036 tRNA-dihydrouridine synthase, putative, C-terminal CLI_RS18120 IPR004619 Type III pantothenate kinase CLI_RS18125 IPR000559 Formate-tetrahydrofolate ligase, FTHFS CLI_RS18125 IPR020628 Formate-tetrahydrofolate ligase, FTHFS, conserved site CLI_RS18125 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18130 IPR000642 Peptidase M41 CLI_RS18130 IPR003593 AAA+ ATPase domain CLI_RS18130 IPR003959 ATPase, AAA-type, core CLI_RS18130 IPR003960 ATPase, AAA-type, conserved site CLI_RS18130 IPR005936 Peptidase, FtsH CLI_RS18130 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18135 IPR000836 Phosphoribosyltransferase domain CLI_RS18135 IPR005904 Hypoxanthine phosphoribosyl transferase CLI_RS18135 IPR029057 Phosphoribosyltransferase-like CLI_RS18140 IPR011063 tRNA(Ile)-lysidine/2-thiocytidine synthase CLI_RS18140 IPR012094 Lysidine-tRNA(Ile) synthetase CLI_RS18140 IPR012795 Lysidine-tRNA(Ile) synthetase, N-terminal CLI_RS18140 IPR012796 Lysidine-tRNA(Ile) synthetase, C-terminal CLI_RS18140 IPR014729 Rossmann-like alpha/beta/alpha sandwich fold CLI_RS18140 IPR020825 Phenylalanyl-tRNA synthetase, B3/B4 CLI_RS18145 IPR001932 Protein phosphatase 2C (PP2C)-like domain CLI_RS18145 IPR014221 Sporulation stage II, protein E CLI_RS18185 IPR003029 Ribosomal protein S1, RNA-binding domain CLI_RS18185 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18185 IPR022967 RNA-binding domain, S1 CLI_RS18190 IPR007060 Septum formation initiator FtsL/DivIC CLI_RS18195 IPR014242 Spore cortex biosynthesis protein, YabQ CLI_RS18195 IPR019074 Spore cortex biosynthesis protein, YabQ-like CLI_RS18200 IPR012504 Sporulation protein YabP CLI_RS18200 IPR022476 Sporulation protein YabP/YqfC CLI_RS18205 IPR002942 RNA-binding S4 domain CLI_RS18205 IPR025490 RNA-binding protein, HP1423 type CLI_RS18210 IPR000119 Histone-like bacterial DNA-binding protein CLI_RS18210 IPR010992 Integration host factor (IHF)-like DNA-binding domain CLI_RS18210 IPR020816 Histone-like DNA-binding protein, conserved site CLI_RS18215 IPR000878 Tetrapyrrole methylase CLI_RS18215 IPR004518 NTP pyrophosphohydrolase MazG, putative catalytic core CLI_RS18215 IPR011551 NTP pyrophosphohydrolase MazG, bacterial CLI_RS18215 IPR014777 Tetrapyrrole methylase, subdomain 1 CLI_RS18215 IPR024180 Bifunctional tetrapyrrole methylase/MazG NTP pyrophosphohydrolase, predicted CLI_RS18220 IPR002797 Polysaccharide biosynthesis protein CLI_RS18220 IPR024923 Peptidoglycan biosynthesis protein, SpoVB type CLI_RS18220 IPR029303 Polysaccharide biosynthesis protein, C-terminal domain CLI_RS18225 IPR007159 AbrB-like domain CLI_RS18225 IPR014213 Sporulation stage V, protein T CLI_RS18225 IPR029016 GAF domain-like CLI_RS18230 IPR000297 Peptidyl-prolyl cis-trans isomerase, PpiC-type CLI_RS18230 IPR023058 Peptidyl-prolyl cis-trans isomerase, PpiC-type, conserved site CLI_RS18230 IPR023059 Foldase protein PrsA CLI_RS18230 IPR027304 Trigger factor/SurA domain CLI_RS18235 IPR001650 Helicase, C-terminal CLI_RS18235 IPR003711 CarD-like/TRCF domain CLI_RS18235 IPR004576 Transcription-repair coupling factor CLI_RS18235 IPR005118 Transcription-repair-coupling factor, C-terminal domain CLI_RS18235 IPR011545 DEAD/DEAH box helicase domain CLI_RS18235 IPR014001 Helicase, superfamily 1/2, ATP-binding domain CLI_RS18235 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18240 IPR001328 Peptidyl-tRNA hydrolase CLI_RS18240 IPR018171 Peptidyl-tRNA hydrolase, conserved site CLI_RS18245 IPR001478 PDZ domain CLI_RS18245 IPR001940 Peptidase S1C CLI_RS18245 IPR009003 Trypsin-like cysteine/serine peptidase domain CLI_RS18250 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18250 IPR003660 HAMP linker domain CLI_RS18250 IPR003661 Signal transduction histidine kinase EnvZ-like, dimerisation/phosphoacceptor domain CLI_RS18250 IPR004358 Signal transduction histidine kinase-related protein, C-terminal CLI_RS18255 IPR001789 Signal transduction response regulator, receiver domain CLI_RS18255 IPR001867 Signal transduction response regulator, C-terminal CLI_RS18255 IPR011006 CheY-like superfamily CLI_RS18255 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18260 IPR000842 Phosphoribosyl pyrophosphate synthetase, conserved site CLI_RS18260 IPR005946 Ribose-phosphate diphosphokinase CLI_RS18260 IPR029057 Phosphoribosyltransferase-like CLI_RS18260 IPR029099 Ribose-phosphate pyrophosphokinase, N-terminal domain CLI_RS18265 IPR001451 Bacterial transferase hexapeptide repeat CLI_RS18265 IPR005835 Nucleotidyl transferase CLI_RS18265 IPR005882 Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase CLI_RS18265 IPR011004 Trimeric LpxA-like CLI_RS18265 IPR029044 Nucleotide-diphospho-sugar transferases CLI_RS18270 IPR007170 Stage V sporulation protein G CLI_RS18275 IPR000836 Phosphoribosyltransferase domain CLI_RS18275 IPR010078 Pur operon repressor CLI_RS18275 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18275 IPR015265 Bacterial purine repressor, N-terminal CLI_RS18275 IPR029057 Phosphoribosyltransferase-like CLI_RS18280 IPR000713 Mur ligase, N-terminal CLI_RS18280 IPR004101 Mur ligase, C-terminal CLI_RS18280 IPR005758 UDP-N-acetylmuramate-alanine ligase CLI_RS18280 IPR013221 Mur ligase, central CLI_RS18280 IPR016040 NAD(P)-binding domain CLI_RS18295 IPR004108 Iron hydrogenase, large subunit, C-terminal CLI_RS18295 IPR009016 Iron hydrogenase CLI_RS18295 IPR017896 4Fe-4S ferredoxin-type, iron-sulphur binding domain CLI_RS18295 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS18300 IPR006439 HAD hydrolase, subfamily IA CLI_RS18300 IPR023214 HAD-like domain CLI_RS18310 IPR005238 ComB-like CLI_RS18310 IPR022995 Probable 2-phosphosulpholactate phosphatase CLI_RS18315 IPR005911 Conserved hypothetical protein CHP01212 CLI_RS18315 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS18315 IPR007197 Radical SAM CLI_RS18315 IPR023404 Radical SAM, alpha/beta horseshoe CLI_RS18315 IPR032432 CLI_RS18315 CLI_RS18330 IPR007197 Radical SAM CLI_RS18330 IPR013785 Aldolase-type TIM barrel CLI_RS18330 IPR016431 Pyruvate-formate lyase-activating enzyme, predicted CLI_RS18335 IPR004089 Methyl-accepting chemotaxis protein (MCP) signalling domain CLI_RS18335 IPR004090 Chemotaxis methyl-accepting receptor CLI_RS18335 IPR011644 Heme-NO binding CLI_RS18335 IPR024096 NO signalling/Golgi transport ligand-binding domain CLI_RS18340 IPR001387 Cro/C1-type helix-turn-helix domain CLI_RS18340 IPR010982 Lambda repressor-like, DNA-binding domain CLI_RS18340 IPR015927 Peptidase S24/S26A/S26B/S26C CLI_RS18340 IPR028360 Peptidase S24/S26, beta-ribbon domain CLI_RS18345 IPR016621 Uncharacterised conserved protein UCP014543 CLI_RS18350 IPR002130 Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain CLI_RS18350 IPR020892 Cyclophilin-type peptidyl-prolyl cis-trans isomerase, conserved site CLI_RS18350 IPR024936 Cyclophilin-type peptidyl-prolyl cis-trans isomerase CLI_RS18350 IPR029000 Cyclophilin-like domain CLI_RS18355 IPR001920 Asp/Glu racemase CLI_RS18355 IPR004391 Glutamate racemase CLI_RS18355 IPR015942 Asp/Glu/hydantoin racemase CLI_RS18355 IPR018187 Asp/Glu racemase, active site CLI_RS18355 IPR033134 CLI_RS18355 CLI_RS18360 IPR008146 Glutamine synthetase, catalytic domain CLI_RS18360 IPR014746 Glutamine synthetase/guanido kinase, catalytic domain CLI_RS18365 IPR009097 RNA ligase/cyclic nucleotide phosphodiesterase CLI_RS18370 IPR001986 Enolpyruvate transferase domain CLI_RS18370 IPR005750 UDP-N-acetylglucosamine 1-carboxyvinyltransferase CLI_RS18370 IPR013792 RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta CLI_RS18375 IPR001279 Beta-lactamase-like CLI_RS18380 IPR019606 GerMN domain CLI_RS18385 IPR004027 SEC-C motif CLI_RS18385 IPR032710 CLI_RS18385 CLI_RS18390 IPR003742 SPOUT methyltransferase, predicted CLI_RS18390 IPR016051 Ribosomal RNA large subunit methyltransferase H CLI_RS18390 IPR029026 tRNA (guanine-N1-)-methyltransferase, N-terminal CLI_RS18390 IPR029028 Alpha/beta knot methyltransferases CLI_RS18395 IPR011701 Major facilitator superfamily CLI_RS18395 IPR020846 Major facilitator superfamily domain CLI_RS18400 IPR005025 NADPH-dependent FMN reductase-like CLI_RS18400 IPR029039 Flavoprotein-like CLI_RS18405 IPR001647 DNA-binding HTH domain, TetR-type CLI_RS18405 IPR009057 Homeodomain-like CLI_RS18405 IPR011075 Tetracycline transcriptional regulator, TetR-related, C-terminal CLI_RS18405 IPR015893 Tetracycline transcriptional regulator, TetR-like, C-terminal CLI_RS18410 IPR009057 Homeodomain-like CLI_RS18410 IPR018060 DNA binding HTH domain, AraC-type CLI_RS18410 IPR018062 HTH domain AraC-type, conserved site CLI_RS18410 IPR020449 Transcription regulator HTH, AraC- type CLI_RS18415 IPR000994 Peptidase M24, structural domain CLI_RS18415 IPR001714 Peptidase M24, methionine aminopeptidase CLI_RS18415 IPR002467 Peptidase M24A, methionine aminopeptidase, subfamily 1 CLI_RS18415 IPR004027 SEC-C motif CLI_RS18415 IPR032710 CLI_RS18415 CLI_RS18420 IPR000415 Nitroreductase-like CLI_RS18420 IPR029479 Nitroreductase CLI_RS18425 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS18425 IPR031000 CLI_RS18425 CLI_RS18430 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS18435 IPR010187 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase family CLI_RS18435 IPR022787 Selenoprotein B, glycine/betaine/sarcosine/D-proline reductase CLI_RS18445 IPR015417 Glycine/sarcosine/betaine reductase complex, protein B, subunit alpha/ beta CLI_RS18445 IPR031002 CLI_RS18445 CLI_RS18450 IPR011053 Single hybrid motif CLI_RS18450 IPR011538 NADH:ubiquinone oxidoreductase, 51kDa subunit CLI_RS18450 IPR026902 RnfC Barrel sandwich hybrid domain CLI_RS18450 IPR031001 CLI_RS18450 CLI_RS18455 IPR016905 Glycyl radical enzyme, HI0521, predicted CLI_RS18460 IPR001989 Radical-activating enzyme, conserved site CLI_RS18460 IPR007197 Radical SAM CLI_RS18460 IPR012839 Glycyl radical enzyme activase CLI_RS18460 IPR017900 4Fe-4S ferredoxin, iron-sulphur binding, conserved site CLI_RS18460 IPR023912 Glycyl radical enzyme activase, YjjW, bact CLI_RS18465 IPR023860 [FeFe]-hydrogenase system regulator TM1266 CLI_RS18470 IPR005244 FO synthase, subunit 2-like CLI_RS18470 IPR006638 Elongator protein 3/MiaB/NifB CLI_RS18470 IPR007197 Radical SAM CLI_RS18470 IPR010722 Biotin and thiamin synthesis-associated domain CLI_RS18470 IPR013785 Aldolase-type TIM barrel CLI_RS18470 IPR024021 [FeFe]-hydrogenase maturation HydE, radical SAM CLI_RS18475 IPR007197 Radical SAM CLI_RS18475 IPR010722 Biotin and thiamin synthesis-associated domain CLI_RS18475 IPR013785 Aldolase-type TIM barrel CLI_RS18475 IPR024007 [FeFe]-hydrogenase maturation HydG, radical SAM CLI_RS18480 IPR005225 Small GTP-binding protein domain CLI_RS18480 IPR006073 GTP binding domain CLI_RS18480 IPR023873 [FeFe]-hydrogenase H-cluster maturation GTPase HydF CLI_RS18480 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18485 IPR001734 Sodium/solute symporter CLI_RS18490 IPR001296 Glycosyl transferase, family 1 CLI_RS18490 IPR028098 Glycosyltransferase subfamily 4, N-terminal domain CLI_RS18495 IPR003141 Polymerase/histidinol phosphatase, N-terminal CLI_RS18495 IPR004013 PHP, C-terminal CLI_RS18495 IPR016195 Polymerase/histidinol phosphatase-like CLI_RS18500 IPR014871 dUTPase/dCTP pyrophosphatase CLI_RS18500 IPR016947 Uncharacterised phage-associated protein UCP030140 CLI_RS18505 IPR006750 Protein of unknown function DUF606 CLI_RS18510 IPR000847 Transcription regulator HTH, LysR CLI_RS18510 IPR005119 LysR, substrate-binding CLI_RS18510 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18515 IPR000209 Peptidase S8/S53 domain CLI_RS18515 IPR015500 Peptidase S8, subtilisin-related CLI_RS18515 IPR022398 Peptidase S8, subtilisin, His-active site CLI_RS18515 IPR023827 Peptidase S8, subtilisin, Asp-active site CLI_RS18520 IPR000847 Transcription regulator HTH, LysR CLI_RS18520 IPR005119 LysR, substrate-binding CLI_RS18520 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18525 IPR006139 D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain CLI_RS18525 IPR006140 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain CLI_RS18525 IPR016040 NAD(P)-binding domain CLI_RS18525 IPR029753 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding domain conserved site CLI_RS18530 IPR001095 Acetyl-CoA carboxylase, alpha subunit CLI_RS18530 IPR029045 ClpP/crotonase-like domain CLI_RS18535 IPR000022 Carboxyl transferase CLI_RS18535 IPR000438 Acetyl-CoA carboxylase carboxyl transferase, beta subunit CLI_RS18535 IPR029045 ClpP/crotonase-like domain CLI_RS18540 IPR004549 Acetyl-CoA carboxylase, biotin carboxylase CLI_RS18540 IPR005479 Carbamoyl-phosphate synthetase large subunit-like, ATP-binding domain CLI_RS18540 IPR005481 Carbamoyl-phosphate synthase, large subunit, N-terminal CLI_RS18540 IPR005482 Biotin carboxylase, C-terminal CLI_RS18540 IPR011054 Rudiment single hybrid motif CLI_RS18540 IPR013815 ATP-grasp fold, subdomain 1 CLI_RS18540 IPR013816 ATP-grasp fold, subdomain 2 CLI_RS18540 IPR016185 Pre-ATP-grasp domain CLI_RS18545 IPR010084 Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ CLI_RS18545 IPR013114 Beta-hydroxydecanoyl thiol ester dehydrase, FabA/FabZ CLI_RS18545 IPR029069 HotDog domain CLI_RS18550 IPR000089 Biotin/lipoyl attachment CLI_RS18550 IPR001249 Acetyl-CoA biotin carboxyl carrier CLI_RS18550 IPR001882 Biotin-binding site CLI_RS18550 IPR011053 Single hybrid motif CLI_RS18555 IPR014030 Beta-ketoacyl synthase, N-terminal CLI_RS18555 IPR014031 Beta-ketoacyl synthase, C-terminal CLI_RS18555 IPR016039 Thiolase-like CLI_RS18555 IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2 CLI_RS18555 IPR020841 Polyketide synthase, beta-ketoacyl synthase domain CLI_RS18560 IPR002347 Glucose/ribitol dehydrogenase CLI_RS18560 IPR011284 3-oxoacyl-(acyl-carrier-protein) reductase CLI_RS18560 IPR016040 NAD(P)-binding domain CLI_RS18560 IPR020904 Short-chain dehydrogenase/reductase, conserved site CLI_RS18565 IPR001227 Acyl transferase domain CLI_RS18565 IPR004410 Malonyl CoA-acyl carrier protein transacylase, FabD-type CLI_RS18565 IPR014043 Acyl transferase CLI_RS18565 IPR016035 Acyl transferase/acyl hydrolase/lysophospholipase CLI_RS18565 IPR016036 Malonyl-CoA ACP transacylase, ACP-binding CLI_RS18565 IPR020801 Polyketide synthase, acyl transferase domain CLI_RS18565 IPR024925 Malonyl CoA-acyl carrier protein transacylase CLI_RS18570 IPR004136 2-nitropropane dioxygenase, NPD CLI_RS18570 IPR013785 Aldolase-type TIM barrel CLI_RS18570 IPR017569 Enoyl-(acyl-carrier-protein) reductase II, putative CLI_RS18575 IPR003231 Acyl carrier protein (ACP) CLI_RS18575 IPR009081 Acyl carrier protein-like CLI_RS18580 IPR004655 3-oxoacyl-[acyl-carrier-protein] synthase 3 CLI_RS18580 IPR013747 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal CLI_RS18580 IPR013751 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III CLI_RS18580 IPR016039 Thiolase-like CLI_RS18585 IPR000835 MarR-type HTH domain CLI_RS18585 IPR011991 Winged helix-turn-helix DNA-binding domain CLI_RS18590 IPR004136 2-nitropropane dioxygenase, NPD CLI_RS18590 IPR013785 Aldolase-type TIM barrel CLI_RS18595 IPR011055 Duplicated hybrid motif CLI_RS18595 IPR016047 Peptidase M23 CLI_RS18600 IPR006343 Replication protein, DnaD/DnaB domain CLI_RS18600 IPR017019 DNA replication protein, predicted, bacterial CLI_RS18605 IPR002611 IstB-like ATP-binding protein CLI_RS18605 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18665 IPR005177 Bifunctional kinase-pyrophosphorylase CLI_RS18665 IPR026565 Putative pyruvate, phosphate dikinase regulatory protein CLI_RS18670 IPR003781 CoA-binding CLI_RS18670 IPR016040 NAD(P)-binding domain CLI_RS18675 IPR004792 Conserved hypothetical protein CHP00275, flavoprotein HI0933-like CLI_RS18675 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS18680 IPR002864 Acyl-ACP thioesterase CLI_RS18680 IPR029069 HotDog domain CLI_RS18685 IPR015077 Domain of unknown function DUF1858 CLI_RS18685 IPR023883 Conserved hypothetical protein CHP03980, redox-disulphide CLI_RS18690 IPR001114 Adenylosuccinate synthetase CLI_RS18690 IPR018220 Adenylosuccinate synthase, active site CLI_RS18690 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18690 IPR033128 CLI_RS18690 CLI_RS18695 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS18700 IPR021377 Protein of unknown function DUF3006 CLI_RS18705 IPR005841 Alpha-D-phosphohexomutase superfamily CLI_RS18705 IPR005843 Alpha-D-phosphohexomutase, C-terminal CLI_RS18705 IPR005844 Alpha-D-phosphohexomutase, alpha/beta/alpha domain I CLI_RS18705 IPR005845 Alpha-D-phosphohexomutase, alpha/beta/alpha domain II CLI_RS18705 IPR005846 Alpha-D-phosphohexomutase, alpha/beta/alpha domain III CLI_RS18705 IPR016055 Alpha-D-phosphohexomutase, alpha/beta/alpha I/II/III CLI_RS18705 IPR016066 Alpha-D-phosphohexomutase, conserved site CLI_RS18710 IPR003593 AAA+ ATPase domain CLI_RS18710 IPR007692 DNA helicase, DnaB type CLI_RS18710 IPR007693 DNA helicase, DnaB-like, N-terminal CLI_RS18710 IPR007694 DNA helicase, DnaB-like, C-terminal CLI_RS18710 IPR016136 DNA helicase DnaB, N-terminal/DNA primase DnaG, C-terminal CLI_RS18710 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18715 IPR003593 AAA+ ATPase domain CLI_RS18715 IPR003959 ATPase, AAA-type, core CLI_RS18715 IPR008268 Peptidase S16, active site CLI_RS18715 IPR008269 Peptidase S16, Lon C-terminal CLI_RS18715 IPR014252 Sporulation protease LonC CLI_RS18715 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18715 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18715 IPR027065 Lon protease CLI_RS18715 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18715 IPR033141 CLI_RS18715 CLI_RS18720 IPR000244 Ribosomal protein L9 CLI_RS18720 IPR009027 Ribosomal protein L9/RNase H1, N-terminal CLI_RS18720 IPR020069 Ribosomal protein L9, C-terminal CLI_RS18720 IPR020070 Ribosomal protein L9, N-terminal CLI_RS18720 IPR020594 Ribosomal protein L9, bacteria/chloroplast CLI_RS18725 IPR001667 DDH domain CLI_RS18725 IPR003156 DHHA1 domain CLI_RS18725 IPR014528 Predicted signal transduction phosphoesterase, YybT type CLI_RS18730 IPR018710 Protein of unknown function DUF2232 CLI_RS18735 IPR025984 MazG-like domain CLI_RS18740 IPR001648 Ribosomal protein S18 CLI_RS18740 IPR018275 Ribosomal protein S18, conserved site CLI_RS18745 IPR000424 Primosome PriB/single-strand DNA-binding CLI_RS18745 IPR011344 Single-stranded DNA-binding protein CLI_RS18745 IPR012340 Nucleic acid-binding, OB-fold CLI_RS18750 IPR000529 Ribosomal protein S6 CLI_RS18750 IPR014717 Translation elongation factor EF1B/ribosomal protein S6 CLI_RS18750 IPR020814 Ribosomal protein S6, plastid/chloroplast CLI_RS18755 IPR010327 2-hydroxyglutaryl-CoA dehydratase, D-component CLI_RS18760 IPR009296 Protein of unknown function DUF951 CLI_RS18765 IPR006685 Mechanosensitive ion channel MscS CLI_RS18765 IPR010920 Like-Sm (LSM) domain CLI_RS18765 IPR011014 Mechanosensitive ion channel MscS, transmembrane-2 CLI_RS18765 IPR011066 Mechanosensitive ion channel MscS, C-terminal CLI_RS18770 IPR021778 Protein of unknown function DUF3343 CLI_RS18775 IPR000192 Aminotransferase class V domain CLI_RS18775 IPR010969 Cysteine desulfurase-related, unknown function CLI_RS18775 IPR015421 Pyridoxal phosphate-dependent transferase, major region, subdomain 1 CLI_RS18775 IPR015422 Pyridoxal phosphate-dependent transferase, major region, subdomain 2 CLI_RS18775 IPR015424 Pyridoxal phosphate-dependent transferase CLI_RS18775 IPR016454 Cysteine desulfurase, NifS CLI_RS18780 IPR002549 Uncharacterised protein family UPF0118 CLI_RS18780 IPR014227 Sporulation integral membrane protein YtvI CLI_RS18785 IPR009665 Protein of unknown function DUF1256 CLI_RS18785 IPR023430 Peptidase HybD-like domain CLI_RS18790 IPR005370 Uncharacterised protein family UPF0180 CLI_RS18795 IPR027981 Protein of unknown function DUF4446 CLI_RS18800 IPR003115 ParB/Sulfiredoxin CLI_RS18800 IPR004437 ParB/RepB/Spo0J partition protein family CLI_RS18805 IPR025669 AAA domain CLI_RS18805 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18810 IPR003115 ParB/Sulfiredoxin CLI_RS18810 IPR004437 ParB/RepB/Spo0J partition protein family CLI_RS18810 IPR023705 Nucleoid occlusion protein CLI_RS18815 IPR003682 rRNA small subunit methyltransferase G CLI_RS18815 IPR029063 S-adenosyl-L-methionine-dependent methyltransferase-like CLI_RS18820 IPR002218 Glucose-inhibited division protein A-related CLI_RS18820 IPR004416 Glucose-inhibited division protein A CLI_RS18820 IPR020595 Glucose-inhibited division protein A-related, conserved site CLI_RS18820 IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain CLI_RS18820 IPR026904 GidA associated domain 3 CLI_RS18825 IPR004520 tRNA modification GTPase MnmE CLI_RS18825 IPR005225 Small GTP-binding protein domain CLI_RS18825 IPR006073 GTP binding domain CLI_RS18825 IPR018948 GTP-binding protein TrmE, N-terminal CLI_RS18825 IPR025867 tRNA modification GTPase MnmE C-terminal domain CLI_RS18825 IPR027266 GTP-binding protein TrmE/Glycine cleavage system T protein, domain 1 CLI_RS18825 IPR027368 tRNA modification GTPase MnmE domain 2 CLI_RS18825 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18830 IPR001374 Single-stranded nucleic acid binding R3H CLI_RS18830 IPR032782 CLI_RS18830 CLI_RS18835 IPR001708 Membrane insertase OXA1/ALB3/YidC CLI_RS18835 IPR028055 Membrane insertase YidC/Oxa1, C-terminal CLI_RS18840 IPR002696 Putative membrane protein insertion efficiency factor CLI_RS18845 IPR000100 Ribonuclease P CLI_RS18845 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18845 IPR020568 Ribosomal protein S5 domain 2-type fold CLI_RS18850 IPR000271 Ribosomal protein L34 CLI_RS18850 IPR020939 Ribosomal protein L34, conserved site CLI_RS18860 IPR013317 Chromosomal replication control, initiator (DnaA)/regulator (Hda) CLI_RS18860 IPR027417 P-loop containing nucleoside triphosphate hydrolase CLI_RS18890 IPR000565 DNA topoisomerase, type IIA, subunit B CLI_RS18890 IPR001241 DNA topoisomerase, type IIA CLI_RS18890 IPR003594 Histidine kinase-like ATPase, C-terminal domain CLI_RS18890 IPR013506 DNA topoisomerase, type IIA, subunit B, domain 2 CLI_RS18890 IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup CLI_RS18890 IPR020568 Ribosomal protein S5 domain 2-type fold